Query 025261
Match_columns 255
No_of_seqs 170 out of 442
Neff 4.3
Searched_HMMs 13730
Date Mon Mar 25 06:50:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025261.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025261hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vlpa1 d.41.2.2 (A:1-149) Nic 45.1 2 0.00014 33.5 -0.2 41 90-130 51-92 (149)
2 d1yira2 d.41.2.2 (A:4-144) Nic 19.8 11 0.00079 28.8 0.1 41 90-131 53-94 (141)
3 d1wxaa1 d.15.1.5 (A:8-110) Afa 17.0 1.1E+02 0.0077 21.0 5.1 52 62-113 3-55 (103)
4 d1zgka1 b.68.11.1 (A:322-609) 14.6 65 0.0047 24.0 3.6 18 39-57 42-59 (288)
5 d1z7ua1 a.4.5.69 (A:1-108) Hyp 11.4 14 0.001 26.7 -1.3 75 91-168 8-94 (108)
6 d1f9ma_ c.47.1.1 (A:) Thioredo 10.9 45 0.0033 23.0 1.4 43 92-136 43-85 (112)
7 d1ybea2 d.41.2.2 (A:8-167) Nic 9.8 33 0.0024 26.4 0.3 45 90-134 67-117 (160)
8 d1rtya_ a.25.2.2 (A:) Putative 9.6 64 0.0047 24.6 2.0 53 88-140 68-137 (161)
9 d2fg9a1 b.45.1.1 (A:1-157) 5-n 9.6 2.4E+02 0.017 19.7 5.3 35 74-108 90-126 (157)
10 d1jjcb6 b.153.1.1 (B:191-399) 9.6 17 0.0012 29.6 -1.6 46 114-159 19-69 (209)
No 1
>d1vlpa1 d.41.2.2 (A:1-149) Nicotinate phosphoribosyltransferase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.15 E-value=2 Score=33.50 Aligned_cols=41 Identities=5% Similarity=0.105 Sum_probs=35.5
Q ss_pred HHHHHHHHHhcc-CCCCCccccccCcccchHHHHHhhcCCCC
Q 025261 90 FKVNQILRELSR-EWPGNSYDLLGRNCNHFCDEFCDRLGVPK 130 (255)
Q Consensus 90 ~e~~~iL~~L~~-~f~g~sYdLL~rNCNHFSdel~~~L~gk~ 130 (255)
..+++.|+-|+. +|+.+..+-|+.+|++|.+++..+|-+-+
T Consensus 51 ~gl~~~i~~l~~lrFt~eel~yL~~~~~~~~~~fl~~L~~~r 92 (149)
T d1vlpa1 51 NWLKEQFSYLGNLRFTEEEIEYLKQEIPYLPSAYIKYISSSN 92 (149)
T ss_dssp HHHHHHHHHGGGCCCCHHHHHHHHHHCTTSCHHHHHHHHSTT
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHcCCCCCHHHHHHHHhCC
Confidence 457888888886 89999999999999999999999996543
No 2
>d1yira2 d.41.2.2 (A:4-144) Nicotinate phosphoribosyltransferase, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=19.78 E-value=11 Score=28.75 Aligned_cols=41 Identities=15% Similarity=0.229 Sum_probs=33.1
Q ss_pred HHHHHHHHHhcc-CCCCCccccccCcccchHHHHHhhcCCCCC
Q 025261 90 FKVNQILRELSR-EWPGNSYDLLGRNCNHFCDEFCDRLGVPKL 131 (255)
Q Consensus 90 ~e~~~iL~~L~~-~f~g~sYdLL~rNCNHFSdel~~~L~gk~I 131 (255)
..+++.|+-|+. .|+.+.-+.|+ .|+.|.+++..+|-+=++
T Consensus 53 ~gl~~~i~~l~~lrFt~eei~yL~-~~~~f~~~fldyL~~frf 94 (141)
T d1yira2 53 PAIREQLEYLAGLAISDEQLAFLE-RIPFLAPDFIRFLGLFRF 94 (141)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHHH-TSTTSCHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHH-cCCCCCHHHHHHHHhCCC
Confidence 447777888875 89999999896 599999999999976544
No 3
>d1wxaa1 d.15.1.5 (A:8-110) Afadin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=16.99 E-value=1.1e+02 Score=20.97 Aligned_cols=52 Identities=15% Similarity=0.114 Sum_probs=35.1
Q ss_pred ceEecCCCCCCCcceEEEEEecceechHHHHHHHHHHhcc-CCCCCccccccC
Q 025261 62 GVFSCPSGRNPMYTYRESIVLGKTNFSIFKVNQILRELSR-EWPGNSYDLLGR 113 (255)
Q Consensus 62 GI~~~~Pg~~p~g~~resI~LG~T~~t~~e~~~iL~~L~~-~f~g~sYdLL~r 113 (255)
|+..+-|+.-.-+.+.+++.+-.+.-..+.|.++|+.+.- .=.+..|.|+.-
T Consensus 3 G~lkVy~~~l~~~~~yk~l~vs~~tTa~eVI~~~L~k~~l~~~~~~~y~L~ev 55 (103)
T d1wxaa1 3 GTLRIYADSLKPNIPYKTILLSTTDTADFAVAESLEKYGLEKENPKDYCIARV 55 (103)
T ss_dssp CEEEECCTTTCSSSCCEEEECCSSCCHHHHHHHHHHHHTCSSSCTTTEEEEEE
T ss_pred cEEEEEcCccCCCCCeEEEEECCCCcHHHHHHHHHHHhCCCCCChhhEEEEEE
Confidence 4444433332223445688998888999999999998873 335778888753
No 4
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.63 E-value=65 Score=23.99 Aligned_cols=18 Identities=17% Similarity=-0.092 Sum_probs=13.3
Q ss_pred eeeeeEEEcCceeEEeccc
Q 025261 39 IFHSAVQVYGDEEWSFGFC 57 (255)
Q Consensus 39 IyHTGVvVyG~eEY~FG~~ 57 (255)
..|+.+.+.++ -|.||+.
T Consensus 42 ~~~~~~~~~~~-iyv~GG~ 59 (288)
T d1zgka1 42 SGLAGCVVGGL-LYAVGGR 59 (288)
T ss_dssp BSCEEEEETTE-EEEECCE
T ss_pred ceeEEEEECCE-EEEEeCc
Confidence 35777777766 8999874
No 5
>d1z7ua1 a.4.5.69 (A:1-108) Hypothetical protein EF0647 {Enterococcus faecalis [TaxId: 1351]}
Probab=11.44 E-value=14 Score=26.69 Aligned_cols=75 Identities=16% Similarity=0.120 Sum_probs=46.5
Q ss_pred HHHHHHHHhccCCCCCccccccCcccchHHHHHhhcCCCCCChH-----HHhHHhhhhhHHHh-------hcccchhhhh
Q 025261 91 KVNQILRELSREWPGNSYDLLGRNCNHFCDEFCDRLGVPKLPGW-----VNRFANAGDAAMEV-------AGTTALRLRQ 158 (255)
Q Consensus 91 e~~~iL~~L~~~f~g~sYdLL~rNCNHFSdel~~~L~gk~IP~w-----InRlA~iG~~~~ev-------~~~~~t~~gq 158 (255)
-|+..++-|+.+|..-=..-|...-++| ++|.+.|. .|..- +.+|...|=.-..+ .++.-|+.|+
T Consensus 8 ~i~~al~iig~kW~~~Il~~L~~g~~RF-~el~~~l~--gIS~~~Ls~rLk~L~~~glv~R~~~~~~p~~veY~LT~~G~ 84 (108)
T d1z7ua1 8 SINLALSTINGKWKLSLMDELFQGTKRN-GELMRALD--GITQRVLTDRLREMEKDGLVHRESFNELPPRVEYTLTPEGY 84 (108)
T ss_dssp HHHHHHHTTCSTTHHHHHHHHHHSCBCH-HHHHHHST--TCCHHHHHHHHHHHHHHTSEEEEEECCSSCEEEEEECHHHH
T ss_pred cHHHHHHHHcCCCHHHHHHHHHcCCCCH-HHHHHHCc--CCChhHHHHHHHHHHHCCcceeeccCCCcceehhhhchhHH
Confidence 3667788888899877555444556677 45666654 34443 34444444211111 1255699999
Q ss_pred HHHHHHHhHH
Q 025261 159 AKTEIVSASK 168 (255)
Q Consensus 159 ~~~~~i~~~~ 168 (255)
.+.|++.+..
T Consensus 85 ~L~pil~~l~ 94 (108)
T d1z7ua1 85 ALYDALSSLC 94 (108)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 6
>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea), thioredoxin F [TaxId: 3562]}
Probab=10.88 E-value=45 Score=23.00 Aligned_cols=43 Identities=19% Similarity=0.348 Sum_probs=33.2
Q ss_pred HHHHHHHhccCCCCCccccccCcccchHHHHHhhcCCCCCChHHH
Q 025261 92 VNQILRELSREWPGNSYDLLGRNCNHFCDEFCDRLGVPKLPGWVN 136 (255)
Q Consensus 92 ~~~iL~~L~~~f~g~sYdLL~rNCNHFSdel~~~L~gk~IP~wIn 136 (255)
+...+++|.++|.. .-++.-||+--..++|+.+..+.+|..+.
T Consensus 43 ~~p~~~~l~~~~~~--v~~~~vd~~~~~~~l~~~~~V~~~Pt~~~ 85 (112)
T d1f9ma_ 43 MAPKYEKLAEEYLD--VIFLKLDCNQENKTLAKELGIRVVPTFKI 85 (112)
T ss_dssp HHHHHHHHHHHCTT--SEEEEEECSSTTHHHHHHHCCSSSSEEEE
T ss_pred HHHHHhhhcccccc--ceeecccccccchhhHhheeeccCCEEEE
Confidence 45567777777753 45677788766789999999999998875
No 7
>d1ybea2 d.41.2.2 (A:8-167) Nicotinate phosphoribosyltransferase, N-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=9.76 E-value=33 Score=26.41 Aligned_cols=45 Identities=20% Similarity=0.230 Sum_probs=35.4
Q ss_pred HHHHHHHHHhcc-CCCCCccccccCccc-----chHHHHHhhcCCCCCChH
Q 025261 90 FKVNQILRELSR-EWPGNSYDLLGRNCN-----HFCDEFCDRLGVPKLPGW 134 (255)
Q Consensus 90 ~e~~~iL~~L~~-~f~g~sYdLL~rNCN-----HFSdel~~~L~gk~IP~w 134 (255)
..+++.|+.|+. .|+.+..+-|+.+|. .|..++..+|-.-+.+..
T Consensus 67 ~gL~~~i~~l~~lrFt~eei~yL~~~~~~~~~~~f~~~fl~~L~~f~f~~~ 117 (160)
T d1ybea2 67 MELREQLDHARTLRLSKKENIWLAGNTFYGRSQIFEPEFLSWLSSYQLPEY 117 (160)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHSCSSSCSCCSCHHHHHHHHTCCCCCC
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHhcCCccccCcCCHHHHHHHhcCCCCce
Confidence 357778888875 899999999999985 499999999976665543
No 8
>d1rtya_ a.25.2.2 (A:) Putative ATP-binding cobalamin adenosyltransferase YvqK {Bacillus subtilis [TaxId: 1423]}
Probab=9.63 E-value=64 Score=24.56 Aligned_cols=53 Identities=15% Similarity=0.153 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHhccCCCCCccccccCcc-----cchHHHHHhhc------------CCCCCChHHHhHHh
Q 025261 88 SIFKVNQILRELSREWPGNSYDLLGRNC-----NHFCDEFCDRL------------GVPKLPGWVNRFAN 140 (255)
Q Consensus 88 t~~e~~~iL~~L~~~f~g~sYdLL~rNC-----NHFSdel~~~L------------~gk~IP~wInRlA~ 140 (255)
..+.++++|+.+.+..++-+-=+|.--+ -|.|...|++. ..+.+..|+|||..
T Consensus 68 ~v~~LE~~ID~~~~~lp~l~~FILPGGs~~~A~lh~aRtv~RRaER~~v~l~~~~~v~~~~~~YlNRLSD 137 (161)
T d1rtya_ 68 SVSFLETRIDAYTAEAPELKKFILPGGSKCASLLHIARTITRRAERRVVALMKSEEIHETVLRYLNRLSD 137 (161)
T ss_dssp HHHHHHHHHHHHHHHSCCCCSCBCSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 3455677888877655554444444433 37788888754 34567889999984
No 9
>d2fg9a1 b.45.1.1 (A:1-157) 5-nitroimidazole resistance protein BT3078 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=9.61 E-value=2.4e+02 Score=19.71 Aligned_cols=35 Identities=14% Similarity=0.333 Sum_probs=27.1
Q ss_pred cceEEEEEecceec--hHHHHHHHHHHhccCCCCCcc
Q 025261 74 YTYRESIVLGKTNF--SIFKVNQILRELSREWPGNSY 108 (255)
Q Consensus 74 g~~resI~LG~T~~--t~~e~~~iL~~L~~~f~g~sY 108 (255)
..|+..+.-|...+ +.++..++++.|.+.|.+...
T Consensus 90 ~~y~sV~v~G~a~~v~d~~e~~~~~~~l~~k~~~~~~ 126 (157)
T d2fg9a1 90 MRSESAMCRGKVEFIEDMEEKRHALDIIMRHYTKDQF 126 (157)
T ss_dssp EEEEEEEEEEECEEECSHHHHHHHHHHHHHTTCSSCC
T ss_pred ccEEEEEEEEEEEEEcCHHHHHHHHHHHHHhhCCCCC
Confidence 35677788898874 467888999999999987654
No 10
>d1jjcb6 b.153.1.1 (B:191-399) B3/B4 domain of PheRS, PheT {Thermus thermophilus [TaxId: 274]}
Probab=9.56 E-value=17 Score=29.58 Aligned_cols=46 Identities=24% Similarity=0.378 Sum_probs=29.6
Q ss_pred cccchHHHHHhhcCCCCCChHHH-hHHhhh----hhHHHhhcccchhhhhH
Q 025261 114 NCNHFCDEFCDRLGVPKLPGWVN-RFANAG----DAAMEVAGTTALRLRQA 159 (255)
Q Consensus 114 NCNHFSdel~~~L~gk~IP~wIn-RlA~iG----~~~~ev~~~~~t~~gq~ 159 (255)
.|.+|+-...+-+..++-|.|+. ||-..| +.+.++.+....-+||=
T Consensus 19 ~C~~y~~~~I~~v~~~~SP~wlk~rL~~~Gir~iN~iVDItNYVmle~GqP 69 (209)
T d1jjcb6 19 GAPHFTLGYAFGLRVAPSPLWMQRALFAAGMRPINNVVDVTNYVMLERAQP 69 (209)
T ss_dssp TCSEEEEEEEESCCCCCCCHHHHHHHHHTTCCCCCHHHHHHHHHHHHHTCC
T ss_pred CCCcEEEEEEECCccCCCHHHHHHHHHHcCCCccchhhhhHHHHHHHhccc
Confidence 59999866666667789999994 566655 22344444444555553
Done!