Query 025264
Match_columns 255
No_of_seqs 130 out of 1874
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 04:05:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025264.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025264hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 1.4E-41 3E-46 273.3 22.0 238 2-254 92-338 (339)
2 KOG0022 Alcohol dehydrogenase, 100.0 7.3E-41 1.6E-45 260.1 22.7 250 4-253 126-375 (375)
3 COG0604 Qor NADPH:quinone redu 100.0 1.5E-40 3.1E-45 273.1 21.3 244 2-253 72-326 (326)
4 COG1062 AdhC Zn-dependent alco 100.0 3.6E-40 7.9E-45 260.1 22.6 231 20-253 135-366 (366)
5 KOG0024 Sorbitol dehydrogenase 100.0 5.9E-38 1.3E-42 245.5 23.4 226 22-255 123-354 (354)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 1.9E-37 4E-42 261.3 25.2 225 23-250 144-369 (371)
7 KOG1197 Predicted quinone oxid 100.0 1.8E-38 3.9E-43 239.9 16.4 244 2-254 79-331 (336)
8 TIGR02818 adh_III_F_hyde S-(hy 100.0 4.6E-37 1E-41 258.5 25.5 231 23-253 138-368 (368)
9 TIGR03451 mycoS_dep_FDH mycoth 100.0 4.4E-37 9.5E-42 257.9 25.3 228 22-252 128-357 (358)
10 PLN02740 Alcohol dehydrogenase 100.0 1.1E-36 2.4E-41 257.3 25.0 232 22-253 150-381 (381)
11 cd08300 alcohol_DH_class_III c 100.0 2E-36 4.3E-41 254.8 25.4 231 22-252 138-368 (368)
12 PLN02827 Alcohol dehydrogenase 100.0 2.6E-36 5.7E-41 254.4 25.8 231 23-255 146-378 (378)
13 cd08301 alcohol_DH_plants Plan 100.0 9.1E-36 2E-40 251.0 25.3 230 23-252 140-369 (369)
14 cd08239 THR_DH_like L-threonin 100.0 7.1E-36 1.5E-40 249.0 24.0 221 22-253 116-339 (339)
15 cd08277 liver_alcohol_DH_like 100.0 2.3E-35 5E-40 248.1 24.7 230 22-252 136-365 (365)
16 PRK09880 L-idonate 5-dehydroge 100.0 1.1E-34 2.4E-39 242.0 24.4 219 22-253 123-343 (343)
17 KOG0023 Alcohol dehydrogenase, 100.0 1.3E-34 2.8E-39 226.3 21.0 237 3-254 101-355 (360)
18 PRK10309 galactitol-1-phosphat 100.0 3.9E-34 8.4E-39 239.2 24.4 246 2-254 68-347 (347)
19 PLN03154 putative allyl alcoho 100.0 2.4E-34 5.2E-39 240.1 22.1 242 2-254 89-346 (348)
20 TIGR03201 dearomat_had 6-hydro 100.0 7.8E-33 1.7E-37 231.4 23.9 223 22-253 113-349 (349)
21 PLN02586 probable cinnamyl alc 100.0 6.8E-33 1.5E-37 232.4 23.1 216 22-253 135-353 (360)
22 cd08295 double_bond_reductase_ 100.0 4.9E-33 1.1E-37 231.8 21.8 241 3-253 85-338 (338)
23 cd08231 MDR_TM0436_like Hypoth 100.0 1.8E-32 3.9E-37 230.4 24.8 226 22-253 128-361 (361)
24 cd08233 butanediol_DH_like (2R 100.0 2E-32 4.3E-37 229.3 24.5 239 3-252 80-351 (351)
25 KOG1198 Zinc-binding oxidoredu 100.0 3.4E-33 7.4E-38 229.7 19.3 232 13-254 94-346 (347)
26 PLN02178 cinnamyl-alcohol dehy 100.0 1.8E-32 3.9E-37 230.6 23.1 216 22-253 129-348 (375)
27 COG1063 Tdh Threonine dehydrog 100.0 4E-32 8.8E-37 225.9 24.4 245 2-253 88-350 (350)
28 cd05279 Zn_ADH1 Liver alcohol 100.0 6.6E-32 1.4E-36 227.1 24.3 228 22-252 135-365 (365)
29 TIGR03366 HpnZ_proposed putati 100.0 1.3E-32 2.8E-37 223.3 19.1 204 22-234 72-280 (280)
30 TIGR02822 adh_fam_2 zinc-bindi 100.0 4.5E-32 9.7E-37 224.9 22.4 209 22-251 118-328 (329)
31 cd08291 ETR_like_1 2-enoyl thi 100.0 3.9E-32 8.4E-37 225.1 21.7 239 3-252 76-324 (324)
32 cd08299 alcohol_DH_class_I_II_ 100.0 1.9E-31 4.1E-36 224.7 25.3 231 22-253 142-373 (373)
33 cd08278 benzyl_alcohol_DH Benz 100.0 1.7E-31 3.7E-36 224.6 24.2 227 22-252 138-365 (365)
34 TIGR02819 fdhA_non_GSH formald 100.0 2.4E-31 5.1E-36 224.9 24.2 226 22-254 132-391 (393)
35 TIGR02825 B4_12hDH leukotriene 100.0 1.3E-31 2.8E-36 222.1 21.6 235 7-252 74-325 (325)
36 PLN02514 cinnamyl-alcohol dehy 100.0 3.4E-31 7.5E-36 222.0 23.2 217 22-254 132-351 (357)
37 COG2130 Putative NADP-dependen 100.0 1.6E-31 3.5E-36 207.5 19.0 241 4-255 86-340 (340)
38 cd08293 PTGR2 Prostaglandin re 100.0 7.9E-31 1.7E-35 219.2 23.6 243 2-253 83-345 (345)
39 cd08285 NADP_ADH NADP(H)-depen 100.0 1.7E-30 3.6E-35 217.7 25.3 226 22-253 117-351 (351)
40 cd08294 leukotriene_B4_DH_like 100.0 5.7E-31 1.2E-35 218.5 22.2 237 6-253 75-329 (329)
41 cd08292 ETR_like_2 2-enoyl thi 100.0 7.1E-31 1.5E-35 217.5 22.7 240 3-252 74-324 (324)
42 cd08230 glucose_DH Glucose deh 100.0 9.2E-31 2E-35 219.5 23.2 218 22-253 120-355 (355)
43 cd08238 sorbose_phosphate_red 100.0 3E-30 6.5E-35 220.0 23.8 246 2-254 77-369 (410)
44 cd08279 Zn_ADH_class_III Class 100.0 7.1E-30 1.5E-34 214.7 25.6 228 21-251 133-362 (363)
45 cd08237 ribitol-5-phosphate_DH 100.0 1E-30 2.3E-35 217.8 18.8 213 22-254 114-340 (341)
46 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.4E-30 3E-35 214.1 18.9 224 3-252 74-308 (308)
47 cd05284 arabinose_DH_like D-ar 100.0 8.3E-30 1.8E-34 212.6 23.8 236 3-253 73-340 (340)
48 cd05278 FDH_like Formaldehyde 100.0 1.6E-29 3.4E-34 211.4 23.9 244 2-253 69-347 (347)
49 cd08296 CAD_like Cinnamyl alco 100.0 1.4E-29 3E-34 210.7 23.3 216 22-252 116-333 (333)
50 cd08246 crotonyl_coA_red croto 100.0 1.2E-29 2.7E-34 215.4 22.7 239 3-251 97-391 (393)
51 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.8E-29 4E-34 212.5 23.5 226 22-252 139-367 (367)
52 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.5E-29 5.4E-34 210.1 24.0 243 3-252 70-344 (345)
53 cd05282 ETR_like 2-enoyl thioe 100.0 1.6E-29 3.4E-34 209.3 22.1 242 2-252 71-323 (323)
54 KOG0025 Zn2+-binding dehydroge 100.0 1.7E-29 3.8E-34 194.6 20.1 242 2-253 92-352 (354)
55 cd08286 FDH_like_ADH2 formalde 100.0 4.7E-29 1E-33 208.5 24.5 242 2-253 69-345 (345)
56 cd08261 Zn_ADH7 Alcohol dehydr 100.0 5E-29 1.1E-33 207.7 24.6 238 3-253 69-337 (337)
57 cd08244 MDR_enoyl_red Possible 100.0 3.8E-29 8.3E-34 207.1 23.8 241 3-253 75-324 (324)
58 PRK10083 putative oxidoreducta 100.0 5E-29 1.1E-33 207.8 23.9 240 2-255 68-339 (339)
59 cd08240 6_hydroxyhexanoate_dh_ 100.0 5.1E-29 1.1E-33 208.6 23.6 242 2-253 81-350 (350)
60 cd08235 iditol_2_DH_like L-idi 100.0 7.4E-29 1.6E-33 207.1 24.1 239 3-252 69-343 (343)
61 cd08256 Zn_ADH2 Alcohol dehydr 100.0 7.5E-29 1.6E-33 207.6 24.1 220 21-251 126-350 (350)
62 PTZ00354 alcohol dehydrogenase 100.0 5.1E-29 1.1E-33 207.2 22.8 244 2-254 73-329 (334)
63 cd08283 FDH_like_1 Glutathione 100.0 9.7E-29 2.1E-33 209.3 24.2 224 22-253 135-386 (386)
64 cd08262 Zn_ADH8 Alcohol dehydr 100.0 1E-28 2.2E-33 206.2 23.3 239 3-252 79-341 (341)
65 cd08284 FDH_like_2 Glutathione 100.0 1.6E-28 3.4E-33 205.2 23.7 241 2-252 68-343 (344)
66 cd05285 sorbitol_DH Sorbitol d 100.0 1.5E-28 3.3E-33 205.2 23.4 219 22-251 116-341 (343)
67 TIGR01751 crot-CoA-red crotony 100.0 1.7E-28 3.8E-33 208.6 23.2 224 22-254 139-388 (398)
68 cd08297 CAD3 Cinnamyl alcohol 100.0 2.9E-28 6.3E-33 203.3 23.7 238 3-253 72-341 (341)
69 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3.7E-28 8E-33 205.7 23.9 242 3-251 103-383 (384)
70 KOG1202 Animal-type fatty acid 100.0 8.1E-30 1.7E-34 225.5 13.6 236 13-253 1495-1741(2376)
71 cd08274 MDR9 Medium chain dehy 100.0 2.7E-28 5.8E-33 204.2 22.1 236 2-253 92-350 (350)
72 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 6E-28 1.3E-32 201.1 23.6 237 3-253 72-338 (338)
73 cd08290 ETR 2-enoyl thioester 100.0 1.9E-28 4.2E-33 204.4 20.6 242 3-253 79-341 (341)
74 TIGR00692 tdh L-threonine 3-de 100.0 7E-28 1.5E-32 201.0 23.8 242 3-253 71-340 (340)
75 PRK10754 quinone oxidoreductas 100.0 1.7E-28 3.6E-33 203.6 19.9 244 3-253 73-327 (327)
76 cd08236 sugar_DH NAD(P)-depend 100.0 7.7E-28 1.7E-32 201.0 23.8 242 3-251 68-343 (343)
77 cd08287 FDH_like_ADH3 formalde 100.0 8.5E-28 1.8E-32 200.9 24.0 242 2-253 68-345 (345)
78 cd08269 Zn_ADH9 Alcohol dehydr 100.0 8.9E-28 1.9E-32 197.9 23.7 239 3-251 67-311 (312)
79 TIGR02817 adh_fam_1 zinc-bindi 100.0 4.7E-28 1E-32 201.7 22.1 238 2-252 73-334 (336)
80 cd08270 MDR4 Medium chain dehy 100.0 5.2E-28 1.1E-32 198.7 21.0 234 2-253 66-305 (305)
81 cd08282 PFDH_like Pseudomonas 100.0 2.1E-27 4.5E-32 200.5 24.4 223 23-253 125-375 (375)
82 PRK09422 ethanol-active dehydr 100.0 1.8E-27 3.8E-32 198.4 23.3 220 22-254 115-337 (338)
83 PRK05396 tdh L-threonine 3-deh 100.0 2.4E-27 5.3E-32 197.8 24.1 240 3-254 73-341 (341)
84 cd05281 TDH Threonine dehydrog 100.0 3E-27 6.6E-32 197.2 23.9 241 3-253 73-341 (341)
85 cd08250 Mgc45594_like Mgc45594 100.0 1.3E-27 2.7E-32 198.5 21.3 241 3-252 76-329 (329)
86 cd08232 idonate-5-DH L-idonate 100.0 2.8E-27 6.1E-32 197.3 23.4 235 3-253 69-339 (339)
87 cd05283 CAD1 Cinnamyl alcohol 100.0 2.2E-27 4.8E-32 197.7 22.0 215 21-252 121-337 (337)
88 PLN02702 L-idonate 5-dehydroge 100.0 4.5E-27 9.7E-32 197.8 23.4 222 22-252 135-363 (364)
89 cd08249 enoyl_reductase_like e 100.0 3E-27 6.5E-32 197.1 22.1 237 2-253 69-339 (339)
90 cd08289 MDR_yhfp_like Yhfp put 100.0 2.7E-27 5.9E-32 196.3 21.4 238 6-253 74-326 (326)
91 cd05286 QOR2 Quinone oxidoredu 100.0 6.7E-27 1.5E-31 192.8 23.4 242 3-253 70-320 (320)
92 cd08276 MDR7 Medium chain dehy 100.0 6.5E-27 1.4E-31 194.6 23.4 239 3-252 73-335 (336)
93 cd08234 threonine_DH_like L-th 100.0 6.1E-27 1.3E-31 194.8 22.9 237 2-251 67-333 (334)
94 cd08243 quinone_oxidoreductase 100.0 3.4E-27 7.5E-32 194.9 20.2 233 8-251 75-319 (320)
95 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.2E-26 2.5E-31 192.4 23.1 236 6-253 74-325 (325)
96 cd08251 polyketide_synthase po 100.0 1E-26 2.2E-31 190.5 21.4 241 2-251 52-303 (303)
97 cd08242 MDR_like Medium chain 100.0 1.7E-26 3.8E-31 190.9 22.8 217 14-253 100-319 (319)
98 TIGR02823 oxido_YhdH putative 100.0 1.9E-26 4.2E-31 191.0 22.9 236 5-252 72-322 (323)
99 smart00829 PKS_ER Enoylreducta 100.0 1.1E-26 2.3E-31 188.8 20.2 241 2-251 38-288 (288)
100 KOG1196 Predicted NAD-dependen 100.0 1.2E-26 2.7E-31 179.8 17.8 241 4-254 86-341 (343)
101 cd08252 AL_MDR Arginate lyase 100.0 4.1E-26 9E-31 189.9 22.5 240 3-252 75-336 (336)
102 PRK13771 putative alcohol dehy 100.0 3E-26 6.4E-31 190.7 21.3 216 22-253 115-333 (334)
103 cd05288 PGDH Prostaglandin deh 99.9 2.4E-26 5.3E-31 190.8 20.4 233 8-251 83-329 (329)
104 cd05276 p53_inducible_oxidored 99.9 7.7E-26 1.7E-30 186.7 22.2 240 3-251 73-323 (323)
105 cd08298 CAD2 Cinnamyl alcohol 99.9 9.7E-26 2.1E-30 187.2 22.2 209 22-251 120-329 (329)
106 cd08266 Zn_ADH_like1 Alcohol d 99.9 1.3E-25 2.9E-30 186.9 23.0 221 22-253 118-342 (342)
107 cd08253 zeta_crystallin Zeta-c 99.9 1.3E-25 2.8E-30 185.6 22.5 242 2-253 72-325 (325)
108 cd05195 enoyl_red enoyl reduct 99.9 5.4E-26 1.2E-30 184.9 19.4 240 3-251 43-293 (293)
109 cd08259 Zn_ADH5 Alcohol dehydr 99.9 1.6E-25 3.4E-30 186.0 22.5 233 3-252 70-332 (332)
110 TIGR02824 quinone_pig3 putativ 99.9 1.4E-25 2.9E-30 185.6 21.9 241 3-252 73-324 (325)
111 cd08258 Zn_ADH4 Alcohol dehydr 99.9 1.2E-25 2.6E-30 184.8 20.3 204 3-217 71-306 (306)
112 cd08245 CAD Cinnamyl alcohol d 99.9 1.7E-25 3.7E-30 185.8 21.4 215 21-251 114-330 (330)
113 cd08255 2-desacetyl-2-hydroxye 99.9 1.9E-25 4.1E-30 181.2 20.5 228 2-251 35-277 (277)
114 cd08288 MDR_yhdh Yhdh putative 99.9 4.6E-25 1E-29 182.8 22.4 237 5-253 73-324 (324)
115 cd08272 MDR6 Medium chain dehy 99.9 3.2E-25 7E-30 183.5 21.2 237 3-253 73-326 (326)
116 cd08268 MDR2 Medium chain dehy 99.9 5.4E-25 1.2E-29 182.2 22.0 243 2-253 72-328 (328)
117 cd08264 Zn_ADH_like2 Alcohol d 99.9 2.5E-25 5.3E-30 184.5 19.6 225 3-249 70-324 (325)
118 cd08247 AST1_like AST1 is a cy 99.9 8.9E-25 1.9E-29 183.1 22.4 243 2-253 73-352 (352)
119 cd08241 QOR1 Quinone oxidoredu 99.9 1.1E-24 2.3E-29 180.0 22.0 241 3-252 73-323 (323)
120 cd08273 MDR8 Medium chain dehy 99.9 5.6E-25 1.2E-29 182.8 20.3 238 2-251 72-330 (331)
121 cd08248 RTN4I1 Human Reticulon 99.9 2.8E-25 6E-30 186.0 18.0 240 2-252 88-350 (350)
122 cd05188 MDR Medium chain reduc 99.9 9.2E-25 2E-29 176.2 19.7 202 3-213 45-270 (271)
123 cd08271 MDR5 Medium chain dehy 99.9 1.7E-24 3.7E-29 179.2 20.8 238 3-253 72-325 (325)
124 cd08267 MDR1 Medium chain dehy 99.9 2E-24 4.3E-29 178.3 20.7 237 2-251 73-319 (319)
125 cd08275 MDR3 Medium chain dehy 99.9 5.5E-24 1.2E-28 177.0 22.9 242 3-253 72-337 (337)
126 cd05289 MDR_like_2 alcohol deh 99.9 9.9E-24 2.1E-28 173.2 19.2 229 3-251 75-309 (309)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 4.1E-20 8.9E-25 132.9 11.5 127 81-215 1-129 (130)
128 cd00401 AdoHcyase S-adenosyl-L 99.6 2.6E-14 5.6E-19 119.9 16.3 176 58-254 188-377 (413)
129 PRK09424 pntA NAD(P) transhydr 99.5 9.3E-13 2E-17 113.4 14.9 154 68-226 162-339 (509)
130 PF13602 ADH_zinc_N_2: Zinc-bi 99.4 5E-14 1.1E-18 100.7 2.6 120 114-251 1-127 (127)
131 PRK11873 arsM arsenite S-adeno 98.9 9.8E-09 2.1E-13 83.1 9.6 163 65-241 72-246 (272)
132 TIGR00561 pntA NAD(P) transhyd 98.8 4.6E-08 1E-12 84.4 11.2 106 69-176 162-288 (511)
133 PRK05476 S-adenosyl-L-homocyst 98.7 5.3E-07 1.1E-11 76.5 14.3 104 57-175 197-302 (425)
134 PRK08306 dipicolinate synthase 98.6 1E-06 2.2E-11 71.9 13.1 95 70-176 151-245 (296)
135 TIGR00936 ahcY adenosylhomocys 98.6 1E-06 2.2E-11 74.3 12.8 101 59-174 182-284 (406)
136 PLN02494 adenosylhomocysteinas 98.5 2.5E-06 5.4E-11 72.8 11.7 101 59-174 241-343 (477)
137 cd05213 NAD_bind_Glutamyl_tRNA 98.5 8.3E-07 1.8E-11 73.1 8.6 108 34-153 139-251 (311)
138 PRK08324 short chain dehydroge 98.2 8.5E-06 1.8E-10 74.4 10.5 138 23-174 385-559 (681)
139 PTZ00075 Adenosylhomocysteinas 98.2 1.5E-05 3.3E-10 68.2 11.0 100 60-174 242-343 (476)
140 TIGR02853 spore_dpaA dipicolin 98.2 2.2E-05 4.7E-10 63.8 10.9 110 54-175 130-243 (287)
141 TIGR00518 alaDH alanine dehydr 98.2 1.5E-05 3.3E-10 67.2 10.3 97 71-175 167-270 (370)
142 COG2518 Pcm Protein-L-isoaspar 98.2 1.1E-05 2.3E-10 61.5 8.2 116 43-171 47-168 (209)
143 PRK00517 prmA ribosomal protei 98.1 1.7E-05 3.8E-10 63.3 9.0 141 9-174 67-215 (250)
144 PRK12771 putative glutamate sy 98.1 4.5E-06 9.8E-11 74.5 5.1 80 67-152 133-234 (564)
145 PRK00045 hemA glutamyl-tRNA re 98.1 8.6E-06 1.9E-10 70.0 6.3 105 37-152 146-254 (423)
146 PF01488 Shikimate_DH: Shikima 98.0 2.3E-05 5E-10 56.4 6.6 74 70-152 11-87 (135)
147 COG4221 Short-chain alcohol de 98.0 4.8E-05 1E-09 59.1 8.4 79 70-150 5-91 (246)
148 PRK11705 cyclopropane fatty ac 97.9 9.3E-05 2E-09 62.7 9.5 112 51-172 148-267 (383)
149 COG0300 DltE Short-chain dehyd 97.8 0.00029 6.3E-09 56.1 10.7 80 68-150 3-94 (265)
150 PRK05786 fabG 3-ketoacyl-(acyl 97.8 0.00035 7.6E-09 55.1 11.3 103 70-175 4-138 (238)
151 PF13460 NAD_binding_10: NADH( 97.8 0.00029 6.2E-09 53.3 9.9 93 74-175 1-100 (183)
152 PRK05993 short chain dehydroge 97.8 0.00024 5.2E-09 57.6 10.1 78 70-149 3-85 (277)
153 TIGR00406 prmA ribosomal prote 97.8 0.00022 4.7E-09 58.2 9.3 97 68-174 157-261 (288)
154 PRK00377 cbiT cobalt-precorrin 97.8 0.00052 1.1E-08 52.8 10.9 102 63-170 33-143 (198)
155 COG3967 DltE Short-chain dehyd 97.7 0.00022 4.7E-09 53.9 7.8 77 71-150 5-88 (245)
156 PRK13943 protein-L-isoaspartat 97.7 0.00065 1.4E-08 56.1 11.2 103 62-171 72-179 (322)
157 TIGR00438 rrmJ cell division p 97.7 0.00093 2E-08 50.9 11.4 100 65-172 27-146 (188)
158 PRK06182 short chain dehydroge 97.7 0.00027 5.9E-09 57.1 8.8 79 70-150 2-84 (273)
159 KOG1209 1-Acyl dihydroxyaceton 97.7 0.00084 1.8E-08 51.1 10.2 78 71-150 7-91 (289)
160 PRK12742 oxidoreductase; Provi 97.7 0.0017 3.6E-08 51.2 12.6 77 70-150 5-85 (237)
161 COG2242 CobL Precorrin-6B meth 97.6 0.001 2.3E-08 49.7 10.4 104 64-174 28-137 (187)
162 PRK04148 hypothetical protein; 97.6 0.00039 8.4E-09 49.4 7.8 96 67-171 13-108 (134)
163 PRK05693 short chain dehydroge 97.6 0.00035 7.6E-09 56.5 8.7 77 72-150 2-82 (274)
164 TIGR01035 hemA glutamyl-tRNA r 97.6 0.00049 1.1E-08 59.2 9.5 76 67-152 176-252 (417)
165 PF00670 AdoHcyase_NAD: S-aden 97.6 0.0011 2.5E-08 48.5 10.0 99 61-174 12-112 (162)
166 KOG1205 Predicted dehydrogenas 97.6 0.0012 2.6E-08 53.1 10.8 110 70-181 11-158 (282)
167 PF02353 CMAS: Mycolic acid cy 97.6 6.9E-05 1.5E-09 60.4 3.8 100 62-173 54-167 (273)
168 COG2230 Cfa Cyclopropane fatty 97.6 0.00032 7E-09 56.2 7.3 105 57-176 59-180 (283)
169 PF02826 2-Hacid_dh_C: D-isome 97.6 0.00068 1.5E-08 51.2 8.7 90 69-173 34-128 (178)
170 PRK07326 short chain dehydroge 97.5 0.0019 4.1E-08 50.9 11.3 79 70-150 5-92 (237)
171 PF12847 Methyltransf_18: Meth 97.5 0.00045 9.9E-09 47.7 6.8 92 70-170 1-109 (112)
172 PRK08017 oxidoreductase; Provi 97.5 0.00092 2E-08 53.3 9.2 77 72-150 3-84 (256)
173 PRK06139 short chain dehydroge 97.5 0.00053 1.1E-08 57.1 8.0 78 70-150 6-94 (330)
174 PF11017 DUF2855: Protein of u 97.5 0.0026 5.6E-08 51.9 11.5 98 70-176 135-235 (314)
175 PRK03369 murD UDP-N-acetylmura 97.5 0.00073 1.6E-08 59.4 9.0 75 67-152 8-82 (488)
176 PRK06057 short chain dehydroge 97.5 0.00093 2E-08 53.4 8.9 79 70-150 6-89 (255)
177 PRK13942 protein-L-isoaspartat 97.5 0.00059 1.3E-08 53.1 7.4 101 62-171 68-175 (212)
178 PRK08265 short chain dehydroge 97.5 0.0025 5.4E-08 51.2 11.3 79 70-150 5-90 (261)
179 PRK08261 fabG 3-ketoacyl-(acyl 97.4 0.0029 6.4E-08 55.1 12.5 78 69-149 208-293 (450)
180 COG1748 LYS9 Saccharopine dehy 97.4 0.0022 4.7E-08 54.0 11.0 94 72-173 2-100 (389)
181 PLN03209 translocon at the inn 97.4 0.0023 5E-08 56.5 11.4 105 64-175 73-210 (576)
182 PRK13944 protein-L-isoaspartat 97.4 0.0014 3.1E-08 50.6 9.2 100 62-171 64-172 (205)
183 PF01135 PCMT: Protein-L-isoas 97.4 0.00042 9.1E-09 53.6 5.8 101 62-171 64-171 (209)
184 PRK07109 short chain dehydroge 97.4 0.0038 8.2E-08 52.1 11.9 79 70-150 7-95 (334)
185 PRK07806 short chain dehydroge 97.4 0.0033 7.2E-08 49.9 11.1 101 70-173 5-135 (248)
186 TIGR02469 CbiT precorrin-6Y C5 97.4 0.0028 6.1E-08 44.4 9.5 101 63-171 12-121 (124)
187 PRK08177 short chain dehydroge 97.4 0.0017 3.8E-08 50.8 9.2 77 72-150 2-81 (225)
188 PRK12828 short chain dehydroge 97.3 0.0014 3E-08 51.6 8.5 79 70-150 6-92 (239)
189 PRK07825 short chain dehydroge 97.3 0.0016 3.4E-08 52.7 8.8 78 71-150 5-88 (273)
190 PRK05872 short chain dehydroge 97.3 0.0016 3.5E-08 53.4 8.8 79 70-150 8-95 (296)
191 COG2519 GCD14 tRNA(1-methylade 97.3 0.0026 5.7E-08 49.9 9.2 105 62-174 86-197 (256)
192 PRK12829 short chain dehydroge 97.3 0.0013 2.9E-08 52.6 8.1 83 67-151 7-97 (264)
193 PRK06953 short chain dehydroge 97.3 0.0023 5E-08 50.0 9.2 77 72-150 2-80 (222)
194 PLN02780 ketoreductase/ oxidor 97.3 0.0018 3.9E-08 53.7 8.9 80 70-150 52-142 (320)
195 PRK07814 short chain dehydroge 97.3 0.0016 3.4E-08 52.4 8.2 79 70-150 9-97 (263)
196 PF01262 AlaDh_PNT_C: Alanine 97.3 0.00088 1.9E-08 50.1 6.3 100 72-174 21-141 (168)
197 PRK00107 gidB 16S rRNA methylt 97.3 0.0031 6.6E-08 48.0 9.2 98 66-172 41-145 (187)
198 TIGR03325 BphB_TodD cis-2,3-di 97.3 0.0017 3.7E-08 52.1 8.4 78 70-149 4-88 (262)
199 PRK07060 short chain dehydroge 97.3 0.0022 4.8E-08 50.7 8.9 77 70-150 8-87 (245)
200 COG4122 Predicted O-methyltran 97.3 0.0048 1E-07 47.8 10.3 109 62-173 51-167 (219)
201 PF13241 NAD_binding_7: Putati 97.3 0.00063 1.4E-08 46.4 4.9 88 70-174 6-93 (103)
202 PRK06949 short chain dehydroge 97.3 0.0017 3.8E-08 51.8 8.3 80 69-150 7-96 (258)
203 COG0686 Ald Alanine dehydrogen 97.3 0.0013 2.7E-08 53.0 7.1 94 72-174 169-270 (371)
204 PRK06841 short chain dehydroge 97.3 0.0019 4E-08 51.6 8.4 79 70-150 14-99 (255)
205 PRK06200 2,3-dihydroxy-2,3-dih 97.3 0.002 4.2E-08 51.8 8.5 79 70-150 5-90 (263)
206 COG2226 UbiE Methylase involve 97.2 0.005 1.1E-07 48.4 10.2 114 55-175 35-159 (238)
207 cd01080 NAD_bind_m-THF_DH_Cycl 97.2 0.005 1.1E-07 45.9 9.8 97 48-174 21-118 (168)
208 PRK06180 short chain dehydroge 97.2 0.0022 4.7E-08 52.0 8.6 79 70-150 3-88 (277)
209 PRK13940 glutamyl-tRNA reducta 97.2 0.0029 6.3E-08 54.2 9.4 75 69-152 179-254 (414)
210 PRK00536 speE spermidine synth 97.2 0.0014 3E-08 52.4 7.0 96 70-171 72-170 (262)
211 PRK07831 short chain dehydroge 97.2 0.0028 6.2E-08 50.8 9.0 81 68-150 14-107 (262)
212 PRK07231 fabG 3-ketoacyl-(acyl 97.2 0.0021 4.5E-08 51.1 8.1 79 70-150 4-91 (251)
213 PRK08339 short chain dehydroge 97.2 0.003 6.6E-08 50.8 8.8 79 70-150 7-95 (263)
214 PRK08261 fabG 3-ketoacyl-(acyl 97.2 0.00079 1.7E-08 58.6 5.8 94 64-175 27-126 (450)
215 PRK06500 short chain dehydroge 97.2 0.0027 5.8E-08 50.4 8.4 79 70-150 5-90 (249)
216 PRK09291 short chain dehydroge 97.2 0.0025 5.4E-08 50.8 8.2 73 71-149 2-82 (257)
217 PRK06484 short chain dehydroge 97.2 0.0058 1.2E-07 54.2 11.2 103 70-175 268-403 (520)
218 PRK05867 short chain dehydroge 97.1 0.0026 5.6E-08 50.8 8.1 79 70-150 8-96 (253)
219 PRK07774 short chain dehydroge 97.1 0.0032 7E-08 50.0 8.5 79 70-150 5-93 (250)
220 PRK09072 short chain dehydroge 97.1 0.0037 8E-08 50.2 8.9 79 70-150 4-90 (263)
221 PRK05866 short chain dehydroge 97.1 0.0035 7.6E-08 51.3 8.8 79 70-150 39-127 (293)
222 COG2264 PrmA Ribosomal protein 97.1 0.0046 1E-07 50.1 9.1 140 24-175 120-266 (300)
223 PRK06196 oxidoreductase; Provi 97.1 0.0039 8.5E-08 51.6 9.0 79 70-150 25-109 (315)
224 CHL00194 ycf39 Ycf39; Provisio 97.1 0.0038 8.2E-08 51.7 8.8 95 73-174 2-111 (317)
225 PRK07454 short chain dehydroge 97.1 0.0051 1.1E-07 48.6 9.2 79 70-150 5-93 (241)
226 PRK08628 short chain dehydroge 97.1 0.0037 8E-08 50.0 8.4 79 70-150 6-93 (258)
227 PRK07478 short chain dehydroge 97.1 0.0038 8.3E-08 49.8 8.4 79 70-150 5-93 (254)
228 COG2910 Putative NADH-flavin r 97.1 0.0052 1.1E-07 45.8 8.1 93 73-175 2-107 (211)
229 PRK11207 tellurite resistance 97.1 0.0025 5.3E-08 49.0 6.9 101 63-173 23-135 (197)
230 PRK05653 fabG 3-ketoacyl-(acyl 97.1 0.0052 1.1E-07 48.5 9.0 79 70-150 4-92 (246)
231 TIGR00080 pimt protein-L-isoas 97.0 0.0019 4.1E-08 50.4 6.3 103 62-171 69-176 (215)
232 PRK07024 short chain dehydroge 97.0 0.0045 9.7E-08 49.5 8.6 78 71-150 2-88 (257)
233 PRK07890 short chain dehydroge 97.0 0.0044 9.5E-08 49.5 8.6 80 69-150 3-92 (258)
234 PRK08217 fabG 3-ketoacyl-(acyl 97.0 0.0041 8.8E-08 49.4 8.4 78 70-149 4-91 (253)
235 PLN02366 spermidine synthase 97.0 0.0093 2E-07 49.0 10.5 102 68-171 89-205 (308)
236 TIGR01832 kduD 2-deoxy-D-gluco 97.0 0.0055 1.2E-07 48.6 8.9 79 70-150 4-90 (248)
237 PRK07502 cyclohexadienyl dehyd 97.0 0.0078 1.7E-07 49.7 10.0 91 72-173 7-101 (307)
238 TIGR02356 adenyl_thiF thiazole 97.0 0.0066 1.4E-07 46.8 9.0 35 70-104 20-54 (202)
239 PRK07062 short chain dehydroge 97.0 0.0037 8E-08 50.2 8.0 79 70-150 7-97 (265)
240 PRK06483 dihydromonapterin red 97.0 0.0071 1.5E-07 47.7 9.4 78 71-150 2-84 (236)
241 PRK07904 short chain dehydroge 97.0 0.0076 1.6E-07 48.2 9.6 82 67-150 4-97 (253)
242 PRK06128 oxidoreductase; Provi 97.0 0.011 2.3E-07 48.6 10.8 102 70-174 54-193 (300)
243 PRK00811 spermidine synthase; 97.0 0.0051 1.1E-07 50.1 8.7 95 69-171 75-190 (283)
244 PRK05884 short chain dehydroge 97.0 0.0064 1.4E-07 47.6 9.0 74 73-149 2-78 (223)
245 PF03446 NAD_binding_2: NAD bi 97.0 0.018 3.9E-07 42.7 11.0 88 73-174 3-96 (163)
246 PF08704 GCD14: tRNA methyltra 97.0 0.0019 4.2E-08 51.1 6.0 107 62-174 32-148 (247)
247 TIGR01470 cysG_Nterm siroheme 97.0 0.065 1.4E-06 41.4 14.3 93 70-173 8-101 (205)
248 PRK06179 short chain dehydroge 97.0 0.003 6.6E-08 50.9 7.3 76 71-150 4-83 (270)
249 COG0169 AroE Shikimate 5-dehyd 97.0 0.0033 7.2E-08 50.8 7.4 44 70-113 125-168 (283)
250 PRK14967 putative methyltransf 97.0 0.019 4E-07 45.1 11.5 97 64-171 30-158 (223)
251 PRK07402 precorrin-6B methylas 97.0 0.021 4.6E-07 43.7 11.6 103 62-173 32-143 (196)
252 TIGR01318 gltD_gamma_fam gluta 97.0 0.0046 1E-07 54.1 8.9 78 70-152 140-238 (467)
253 PRK15116 sulfur acceptor prote 97.0 0.015 3.3E-07 46.7 11.0 104 70-175 29-156 (268)
254 PF03807 F420_oxidored: NADP o 97.0 0.023 4.9E-07 38.0 10.4 85 73-171 1-93 (96)
255 KOG1201 Hydroxysteroid 17-beta 97.0 0.006 1.3E-07 49.0 8.5 78 70-150 37-124 (300)
256 PRK12549 shikimate 5-dehydroge 97.0 0.01 2.2E-07 48.4 10.1 43 70-112 126-168 (284)
257 PRK07576 short chain dehydroge 97.0 0.0033 7.1E-08 50.6 7.3 78 70-149 8-95 (264)
258 PRK06138 short chain dehydroge 97.0 0.0046 9.9E-08 49.2 8.0 79 70-150 4-91 (252)
259 PRK06194 hypothetical protein; 97.0 0.0049 1.1E-07 50.1 8.3 78 71-150 6-93 (287)
260 PRK07523 gluconate 5-dehydroge 97.0 0.0045 9.8E-08 49.4 7.9 79 70-150 9-97 (255)
261 PRK06482 short chain dehydroge 96.9 0.0056 1.2E-07 49.5 8.5 77 72-150 3-86 (276)
262 PRK06172 short chain dehydroge 96.9 0.0053 1.2E-07 48.9 8.2 79 70-150 6-94 (253)
263 PRK05854 short chain dehydroge 96.9 0.0064 1.4E-07 50.3 8.9 79 70-150 13-103 (313)
264 PRK12809 putative oxidoreducta 96.9 0.006 1.3E-07 55.6 9.3 76 70-151 309-406 (639)
265 PRK07063 short chain dehydroge 96.9 0.0054 1.2E-07 49.1 8.2 79 70-150 6-96 (260)
266 PRK00258 aroE shikimate 5-dehy 96.9 0.0057 1.2E-07 49.7 8.3 76 69-152 121-197 (278)
267 PRK12939 short chain dehydroge 96.9 0.0058 1.3E-07 48.4 8.3 79 70-150 6-94 (250)
268 PRK07856 short chain dehydroge 96.9 0.0051 1.1E-07 49.0 7.8 77 70-150 5-85 (252)
269 TIGR01809 Shik-DH-AROM shikima 96.9 0.0038 8.3E-08 50.8 7.1 76 70-151 124-201 (282)
270 PRK08213 gluconate 5-dehydroge 96.9 0.0065 1.4E-07 48.6 8.5 79 70-150 11-99 (259)
271 cd00755 YgdL_like Family of ac 96.9 0.023 4.9E-07 44.8 11.0 102 71-174 11-136 (231)
272 PRK14175 bifunctional 5,10-met 96.9 0.014 2.9E-07 47.3 9.9 94 50-174 137-232 (286)
273 PRK06125 short chain dehydroge 96.9 0.0055 1.2E-07 49.0 7.8 77 70-150 6-91 (259)
274 cd05311 NAD_bind_2_malic_enz N 96.9 0.023 4.9E-07 44.7 11.0 92 69-172 23-128 (226)
275 PRK13394 3-hydroxybutyrate deh 96.9 0.0073 1.6E-07 48.3 8.5 79 70-150 6-94 (262)
276 PRK06463 fabG 3-ketoacyl-(acyl 96.9 0.0083 1.8E-07 47.9 8.8 79 70-150 6-89 (255)
277 PRK07677 short chain dehydroge 96.9 0.0056 1.2E-07 48.8 7.8 78 71-150 1-88 (252)
278 PF03435 Saccharop_dh: Sacchar 96.9 0.0078 1.7E-07 51.3 9.1 90 74-170 1-96 (386)
279 PRK07074 short chain dehydroge 96.9 0.008 1.7E-07 48.0 8.7 78 71-150 2-87 (257)
280 PRK06719 precorrin-2 dehydroge 96.9 0.025 5.4E-07 41.7 10.5 81 70-163 12-92 (157)
281 PRK08703 short chain dehydroge 96.9 0.005 1.1E-07 48.6 7.4 80 70-150 5-97 (239)
282 PRK06198 short chain dehydroge 96.9 0.0097 2.1E-07 47.5 9.1 80 69-150 4-94 (260)
283 PRK05717 oxidoreductase; Valid 96.9 0.0071 1.5E-07 48.3 8.3 79 70-150 9-94 (255)
284 PRK08267 short chain dehydroge 96.9 0.0078 1.7E-07 48.1 8.5 77 72-150 2-87 (260)
285 PF07021 MetW: Methionine bios 96.9 0.014 3E-07 44.1 9.1 71 67-145 10-80 (193)
286 COG2227 UbiG 2-polyprenyl-3-me 96.8 0.015 3.2E-07 45.4 9.4 97 69-173 58-162 (243)
287 PRK06181 short chain dehydroge 96.8 0.0073 1.6E-07 48.4 8.3 77 72-150 2-88 (263)
288 PRK06914 short chain dehydroge 96.8 0.0077 1.7E-07 48.8 8.5 78 70-150 2-91 (280)
289 PRK06718 precorrin-2 dehydroge 96.8 0.077 1.7E-06 40.9 13.5 92 70-173 9-101 (202)
290 PRK07453 protochlorophyllide o 96.8 0.0075 1.6E-07 50.0 8.5 78 70-149 5-92 (322)
291 PLN02253 xanthoxin dehydrogena 96.8 0.0069 1.5E-07 49.1 8.1 79 70-150 17-104 (280)
292 cd01078 NAD_bind_H4MPT_DH NADP 96.8 0.012 2.6E-07 45.0 9.0 76 70-152 27-109 (194)
293 PRK07035 short chain dehydroge 96.8 0.0078 1.7E-07 47.9 8.2 78 70-149 7-94 (252)
294 PRK08589 short chain dehydroge 96.8 0.0073 1.6E-07 48.8 8.2 78 70-150 5-92 (272)
295 PRK08251 short chain dehydroge 96.8 0.0092 2E-07 47.3 8.6 77 71-149 2-90 (248)
296 PRK08643 acetoin reductase; Va 96.8 0.0079 1.7E-07 48.0 8.3 78 71-150 2-89 (256)
297 PRK12367 short chain dehydroge 96.8 0.011 2.4E-07 47.0 9.0 74 70-150 13-89 (245)
298 PRK06398 aldose dehydrogenase; 96.8 0.0054 1.2E-07 49.1 7.3 74 70-150 5-82 (258)
299 cd01075 NAD_bind_Leu_Phe_Val_D 96.8 0.0095 2.1E-07 45.9 8.3 82 69-163 26-108 (200)
300 PRK06484 short chain dehydroge 96.8 0.0077 1.7E-07 53.4 8.9 79 70-150 4-89 (520)
301 PRK10538 malonic semialdehyde 96.8 0.0086 1.9E-07 47.6 8.3 76 73-150 2-84 (248)
302 cd00757 ThiF_MoeB_HesA_family 96.8 0.018 4E-07 45.3 10.0 34 71-104 21-54 (228)
303 PRK06197 short chain dehydroge 96.8 0.0094 2E-07 49.0 8.8 79 70-150 15-105 (306)
304 PRK12937 short chain dehydroge 96.8 0.029 6.2E-07 44.3 11.3 79 70-150 4-93 (245)
305 PRK05876 short chain dehydroge 96.8 0.008 1.7E-07 48.7 8.2 79 70-150 5-93 (275)
306 COG1179 Dinucleotide-utilizing 96.8 0.028 6.1E-07 43.8 10.5 103 70-175 29-156 (263)
307 PRK06114 short chain dehydroge 96.8 0.012 2.6E-07 47.0 9.1 79 70-150 7-96 (254)
308 PRK06505 enoyl-(acyl carrier p 96.8 0.009 2E-07 48.3 8.4 79 70-150 6-95 (271)
309 PLN03075 nicotianamine synthas 96.8 0.012 2.6E-07 47.8 8.9 97 70-171 123-232 (296)
310 PRK09186 flagellin modificatio 96.8 0.009 1.9E-07 47.6 8.3 78 70-149 3-92 (256)
311 PRK07577 short chain dehydroge 96.8 0.0083 1.8E-07 47.1 8.0 74 70-150 2-78 (234)
312 PRK08277 D-mannonate oxidoredu 96.8 0.009 1.9E-07 48.4 8.4 78 70-149 9-96 (278)
313 PRK08340 glucose-1-dehydrogena 96.8 0.0092 2E-07 47.8 8.3 76 73-150 2-86 (259)
314 PRK12823 benD 1,6-dihydroxycyc 96.8 0.0072 1.6E-07 48.3 7.7 78 70-149 7-93 (260)
315 PLN02476 O-methyltransferase 96.8 0.014 3E-07 47.2 9.1 106 62-171 110-227 (278)
316 PRK05875 short chain dehydroge 96.8 0.0094 2E-07 48.1 8.5 78 70-149 6-95 (276)
317 PRK06079 enoyl-(acyl carrier p 96.8 0.01 2.3E-07 47.3 8.6 79 70-150 6-93 (252)
318 PRK12429 3-hydroxybutyrate deh 96.8 0.0078 1.7E-07 48.0 7.8 79 70-150 3-91 (258)
319 PRK07666 fabG 3-ketoacyl-(acyl 96.8 0.0093 2E-07 47.0 8.2 79 70-150 6-94 (239)
320 PF05368 NmrA: NmrA-like famil 96.8 0.014 3E-07 46.0 9.2 69 74-149 1-73 (233)
321 PRK07067 sorbitol dehydrogenas 96.8 0.01 2.3E-07 47.3 8.5 79 70-150 5-90 (257)
322 TIGR03840 TMPT_Se_Te thiopurin 96.7 0.016 3.5E-07 45.0 9.2 102 68-173 32-153 (213)
323 PRK07832 short chain dehydroge 96.7 0.011 2.3E-07 47.8 8.6 76 73-150 2-88 (272)
324 PRK08264 short chain dehydroge 96.7 0.0074 1.6E-07 47.5 7.5 77 70-150 5-83 (238)
325 PRK12481 2-deoxy-D-gluconate 3 96.7 0.0094 2E-07 47.5 8.2 79 70-150 7-93 (251)
326 PRK08618 ornithine cyclodeamin 96.7 0.043 9.4E-07 45.7 12.3 94 69-175 125-224 (325)
327 PRK08226 short chain dehydroge 96.7 0.01 2.3E-07 47.5 8.4 79 70-150 5-92 (263)
328 PRK12548 shikimate 5-dehydroge 96.7 0.018 3.9E-07 47.0 9.8 36 70-105 125-160 (289)
329 COG0373 HemA Glutamyl-tRNA red 96.7 0.013 2.9E-07 49.7 9.2 96 69-174 176-276 (414)
330 PRK08219 short chain dehydroge 96.7 0.014 3E-07 45.5 8.9 74 72-150 4-81 (227)
331 PRK08594 enoyl-(acyl carrier p 96.7 0.032 7E-07 44.7 11.2 78 70-149 6-96 (257)
332 TIGR00507 aroE shikimate 5-deh 96.7 0.014 3E-07 47.2 9.0 71 69-151 115-189 (270)
333 PRK09242 tropinone reductase; 96.7 0.011 2.4E-07 47.2 8.5 79 70-150 8-98 (257)
334 PLN02781 Probable caffeoyl-CoA 96.7 0.015 3.2E-07 46.0 8.9 106 62-171 60-177 (234)
335 PRK12826 3-ketoacyl-(acyl-carr 96.7 0.01 2.2E-07 47.0 8.2 79 70-150 5-93 (251)
336 PRK14103 trans-aconitate 2-met 96.7 0.032 6.9E-07 44.7 11.0 98 62-171 21-125 (255)
337 PRK06701 short chain dehydroge 96.7 0.026 5.6E-07 46.1 10.6 81 68-150 43-134 (290)
338 PRK08862 short chain dehydroge 96.7 0.013 2.9E-07 46.0 8.6 78 70-149 4-92 (227)
339 PRK01581 speE spermidine synth 96.7 0.034 7.3E-07 46.5 11.1 102 69-173 149-269 (374)
340 PRK06101 short chain dehydroge 96.7 0.016 3.5E-07 45.8 9.1 75 72-149 2-80 (240)
341 PRK07985 oxidoreductase; Provi 96.7 0.03 6.5E-07 45.8 10.9 102 70-174 48-187 (294)
342 PRK08263 short chain dehydroge 96.7 0.012 2.6E-07 47.6 8.5 78 71-150 3-87 (275)
343 PF02558 ApbA: Ketopantoate re 96.7 0.0048 1E-07 45.1 5.6 94 74-173 1-102 (151)
344 TIGR02355 moeB molybdopterin s 96.7 0.014 3.1E-07 46.2 8.5 34 71-104 24-57 (240)
345 PRK05690 molybdopterin biosynt 96.6 0.019 4.2E-07 45.6 9.2 35 70-104 31-65 (245)
346 PRK01683 trans-aconitate 2-met 96.6 0.032 6.9E-07 44.7 10.6 100 62-172 23-130 (258)
347 PRK12769 putative oxidoreducta 96.6 0.012 2.5E-07 53.9 8.9 76 69-150 325-422 (654)
348 TIGR03206 benzo_BadH 2-hydroxy 96.6 0.013 2.9E-07 46.4 8.3 78 70-149 2-89 (250)
349 PRK04457 spermidine synthase; 96.6 0.046 1E-06 44.0 11.3 95 69-171 65-176 (262)
350 PRK08085 gluconate 5-dehydroge 96.6 0.015 3.3E-07 46.3 8.6 79 70-150 8-96 (254)
351 PRK08993 2-deoxy-D-gluconate 3 96.6 0.016 3.5E-07 46.2 8.7 79 70-150 9-95 (253)
352 PRK08317 hypothetical protein; 96.6 0.031 6.6E-07 44.0 10.3 102 62-172 11-124 (241)
353 PTZ00098 phosphoethanolamine N 96.6 0.014 3.1E-07 47.0 8.3 105 61-173 43-157 (263)
354 PRK07574 formate dehydrogenase 96.6 0.032 6.8E-07 47.4 10.6 89 70-172 191-284 (385)
355 KOG1502 Flavonol reductase/cin 96.6 0.02 4.3E-07 47.0 9.0 74 70-150 5-88 (327)
356 KOG0725 Reductases with broad 96.6 0.018 3.8E-07 46.6 8.7 79 70-150 7-99 (270)
357 PRK12384 sorbitol-6-phosphate 96.6 0.013 2.8E-07 46.8 8.1 78 71-150 2-91 (259)
358 PRK08278 short chain dehydroge 96.6 0.014 3E-07 47.2 8.2 79 70-150 5-100 (273)
359 TIGR00477 tehB tellurite resis 96.6 0.014 3.1E-07 44.7 7.9 101 62-173 22-134 (195)
360 PRK08945 putative oxoacyl-(acy 96.6 0.012 2.5E-07 46.8 7.7 83 67-150 8-102 (247)
361 PF06325 PrmA: Ribosomal prote 96.6 0.022 4.8E-07 46.4 9.2 95 68-175 159-262 (295)
362 PRK06124 gluconate 5-dehydroge 96.6 0.017 3.6E-07 46.1 8.5 79 70-150 10-98 (256)
363 cd01483 E1_enzyme_family Super 96.6 0.028 6E-07 40.7 8.9 32 73-104 1-32 (143)
364 PRK07791 short chain dehydroge 96.6 0.022 4.9E-07 46.4 9.3 80 69-150 4-102 (286)
365 PF00899 ThiF: ThiF family; I 96.5 0.021 4.5E-07 40.9 8.1 34 71-104 2-35 (135)
366 PRK12936 3-ketoacyl-(acyl-carr 96.5 0.018 3.9E-07 45.5 8.5 79 70-150 5-90 (245)
367 PRK07688 thiamine/molybdopteri 96.5 0.017 3.8E-07 48.2 8.6 35 70-104 23-57 (339)
368 PRK00312 pcm protein-L-isoaspa 96.5 0.013 2.8E-07 45.5 7.5 101 62-171 70-174 (212)
369 PRK06077 fabG 3-ketoacyl-(acyl 96.5 0.049 1.1E-06 43.2 11.0 102 71-175 6-143 (252)
370 PRK06603 enoyl-(acyl carrier p 96.5 0.017 3.6E-07 46.4 8.4 78 70-149 7-95 (260)
371 PRK06935 2-deoxy-D-gluconate 3 96.5 0.017 3.7E-07 46.2 8.4 78 70-150 14-101 (258)
372 cd01065 NAD_bind_Shikimate_DH 96.5 0.022 4.9E-07 41.7 8.4 75 69-152 17-93 (155)
373 PF02670 DXP_reductoisom: 1-de 96.5 0.053 1.1E-06 38.4 9.7 91 74-169 1-118 (129)
374 KOG1014 17 beta-hydroxysteroid 96.5 0.017 3.6E-07 46.8 7.9 79 69-150 47-136 (312)
375 TIGR01963 PHB_DH 3-hydroxybuty 96.5 0.016 3.5E-07 46.1 8.1 77 72-150 2-88 (255)
376 PLN02244 tocopherol O-methyltr 96.5 0.009 2E-07 50.0 6.8 98 69-173 117-224 (340)
377 PRK12475 thiamine/molybdopteri 96.5 0.021 4.5E-07 47.7 8.9 36 70-105 23-58 (338)
378 PRK08762 molybdopterin biosynt 96.5 0.017 3.6E-07 49.1 8.5 35 70-104 134-168 (376)
379 PRK06720 hypothetical protein; 96.5 0.026 5.7E-07 42.2 8.5 39 70-109 15-54 (169)
380 COG0421 SpeE Spermidine syntha 96.5 0.056 1.2E-06 43.8 10.9 101 67-171 74-189 (282)
381 PRK07533 enoyl-(acyl carrier p 96.5 0.013 2.8E-07 46.9 7.4 103 70-175 9-151 (258)
382 PRK07097 gluconate 5-dehydroge 96.5 0.021 4.5E-07 45.9 8.6 79 70-150 9-97 (265)
383 cd01492 Aos1_SUMO Ubiquitin ac 96.5 0.025 5.3E-07 43.5 8.5 35 70-104 20-54 (197)
384 PF00106 adh_short: short chai 96.5 0.0091 2E-07 44.2 6.0 78 72-150 1-90 (167)
385 PRK12747 short chain dehydroge 96.5 0.051 1.1E-06 43.2 10.7 103 70-175 3-147 (252)
386 PRK14618 NAD(P)H-dependent gly 96.5 0.048 1E-06 45.4 10.9 94 72-173 5-105 (328)
387 PLN03139 formate dehydrogenase 96.5 0.034 7.4E-07 47.2 9.9 46 70-116 198-243 (386)
388 PRK06523 short chain dehydroge 96.5 0.015 3.3E-07 46.5 7.7 74 70-149 8-86 (260)
389 PF02254 TrkA_N: TrkA-N domain 96.5 0.065 1.4E-06 37.1 10.0 74 74-152 1-74 (116)
390 PRK08690 enoyl-(acyl carrier p 96.4 0.022 4.9E-07 45.7 8.5 79 70-150 5-94 (261)
391 PRK06113 7-alpha-hydroxysteroi 96.4 0.021 4.6E-07 45.5 8.3 79 70-150 10-98 (255)
392 TIGR02622 CDP_4_6_dhtase CDP-g 96.4 0.0095 2.1E-07 50.0 6.5 75 70-150 3-85 (349)
393 PRK08644 thiamine biosynthesis 96.4 0.025 5.3E-07 44.0 8.3 35 70-104 27-61 (212)
394 TIGR00138 gidB 16S rRNA methyl 96.4 0.022 4.7E-07 43.1 7.8 94 70-171 42-141 (181)
395 PRK01438 murD UDP-N-acetylmura 96.4 0.027 5.8E-07 49.5 9.5 70 69-150 14-88 (480)
396 PF01596 Methyltransf_3: O-met 96.4 0.007 1.5E-07 46.7 5.1 101 66-171 41-154 (205)
397 PRK12743 oxidoreductase; Provi 96.4 0.029 6.3E-07 44.8 8.9 78 71-150 2-90 (256)
398 PRK07424 bifunctional sterol d 96.4 0.022 4.8E-07 48.7 8.5 74 70-150 177-255 (406)
399 PRK05557 fabG 3-ketoacyl-(acyl 96.4 0.034 7.3E-07 43.9 9.2 79 70-150 4-93 (248)
400 PRK05650 short chain dehydroge 96.4 0.022 4.7E-07 45.9 8.1 76 73-150 2-87 (270)
401 PRK07417 arogenate dehydrogena 96.4 0.043 9.3E-07 44.6 9.8 68 73-152 2-69 (279)
402 PRK11036 putative S-adenosyl-L 96.4 0.063 1.4E-06 43.0 10.7 93 69-171 43-148 (255)
403 PRK08328 hypothetical protein; 96.4 0.019 4.2E-07 45.2 7.5 35 70-104 26-60 (231)
404 PRK07984 enoyl-(acyl carrier p 96.4 0.023 5E-07 45.7 8.1 78 70-149 5-93 (262)
405 PLN00203 glutamyl-tRNA reducta 96.4 0.018 3.9E-07 50.8 7.9 73 71-152 266-341 (519)
406 TIGR01505 tartro_sem_red 2-hyd 96.3 0.052 1.1E-06 44.4 10.3 67 73-152 1-67 (291)
407 PLN02657 3,8-divinyl protochlo 96.3 0.033 7.2E-07 47.6 9.4 82 66-150 55-146 (390)
408 PRK06171 sorbitol-6-phosphate 96.3 0.017 3.7E-07 46.3 7.4 76 70-150 8-87 (266)
409 PRK08303 short chain dehydroge 96.3 0.025 5.5E-07 46.6 8.4 35 70-105 7-42 (305)
410 PRK04266 fibrillarin; Provisio 96.3 0.096 2.1E-06 41.1 11.2 101 64-171 66-175 (226)
411 PRK08415 enoyl-(acyl carrier p 96.3 0.028 6E-07 45.6 8.5 103 70-175 4-146 (274)
412 PRK08063 enoyl-(acyl carrier p 96.3 0.025 5.4E-07 44.9 8.1 79 70-150 3-92 (250)
413 PRK13255 thiopurine S-methyltr 96.3 0.037 8E-07 43.2 8.7 100 66-171 33-154 (218)
414 PLN00141 Tic62-NAD(P)-related 96.3 0.022 4.9E-07 45.4 7.8 100 70-174 16-133 (251)
415 TIGR02354 thiF_fam2 thiamine b 96.3 0.02 4.4E-07 44.0 7.2 35 70-104 20-54 (200)
416 PRK07102 short chain dehydroge 96.3 0.029 6.2E-07 44.4 8.4 76 72-150 2-86 (243)
417 PRK08159 enoyl-(acyl carrier p 96.3 0.028 6E-07 45.5 8.3 82 67-150 6-98 (272)
418 PRK11559 garR tartronate semia 96.3 0.074 1.6E-06 43.6 10.9 70 73-155 4-73 (296)
419 PRK07792 fabG 3-ketoacyl-(acyl 96.3 0.034 7.3E-07 45.8 8.8 77 70-150 11-99 (306)
420 PRK10258 biotin biosynthesis p 96.2 0.18 3.9E-06 40.2 12.7 99 64-173 36-141 (251)
421 PRK08287 cobalt-precorrin-6Y C 96.2 0.1 2.3E-06 39.6 10.8 99 62-171 23-130 (187)
422 COG0031 CysK Cysteine synthase 96.2 0.19 4E-06 41.0 12.5 60 63-123 54-116 (300)
423 PRK12938 acetyacetyl-CoA reduc 96.2 0.02 4.4E-07 45.3 7.2 79 70-150 2-91 (246)
424 PF01210 NAD_Gly3P_dh_N: NAD-d 96.2 0.068 1.5E-06 39.4 9.4 84 73-163 1-91 (157)
425 PRK00121 trmB tRNA (guanine-N( 96.2 0.11 2.3E-06 40.1 10.9 98 70-172 40-156 (202)
426 PLN02986 cinnamyl-alcohol dehy 96.2 0.041 8.9E-07 45.6 9.1 39 70-109 4-43 (322)
427 PRK07775 short chain dehydroge 96.2 0.036 7.9E-07 44.8 8.6 79 70-150 9-97 (274)
428 TIGR02752 MenG_heptapren 2-hep 96.2 0.026 5.7E-07 44.4 7.6 103 62-173 37-152 (231)
429 PRK09135 pteridine reductase; 96.2 0.04 8.6E-07 43.6 8.7 78 70-149 5-94 (249)
430 KOG1210 Predicted 3-ketosphing 96.2 0.025 5.3E-07 45.9 7.2 84 66-150 28-122 (331)
431 PRK14106 murD UDP-N-acetylmura 96.2 0.038 8.3E-07 48.1 9.1 70 70-150 4-78 (450)
432 TIGR00563 rsmB ribosomal RNA s 96.2 0.066 1.4E-06 46.3 10.4 104 63-173 231-369 (426)
433 PRK06522 2-dehydropantoate 2-r 96.2 0.023 4.9E-07 46.7 7.3 93 73-172 2-100 (304)
434 PRK05708 2-dehydropantoate 2-r 96.2 0.026 5.7E-07 46.5 7.6 95 72-173 3-105 (305)
435 PLN02256 arogenate dehydrogena 96.1 0.15 3.3E-06 42.0 11.9 97 62-173 27-128 (304)
436 PF10727 Rossmann-like: Rossma 96.1 0.032 6.9E-07 39.5 6.9 79 71-163 10-90 (127)
437 PRK06940 short chain dehydroge 96.1 0.045 9.7E-07 44.3 8.8 100 71-174 2-127 (275)
438 PLN02823 spermine synthase 96.1 0.067 1.4E-06 44.6 9.8 99 70-171 103-219 (336)
439 PRK05597 molybdopterin biosynt 96.1 0.044 9.5E-07 46.2 8.8 36 70-105 27-62 (355)
440 PRK10669 putative cation:proto 96.1 0.053 1.1E-06 48.7 9.8 76 72-152 418-493 (558)
441 PLN02589 caffeoyl-CoA O-methyl 96.1 0.061 1.3E-06 42.8 9.1 104 62-170 71-188 (247)
442 PRK14191 bifunctional 5,10-met 96.1 0.08 1.7E-06 42.9 9.8 94 50-174 136-231 (285)
443 KOG1610 Corticosteroid 11-beta 96.1 0.19 4.2E-06 40.9 11.8 107 69-177 27-169 (322)
444 PRK05600 thiamine biosynthesis 96.1 0.051 1.1E-06 46.0 9.1 35 70-104 40-74 (370)
445 PRK03562 glutathione-regulated 96.1 0.053 1.2E-06 49.2 9.8 76 71-152 400-476 (621)
446 TIGR03649 ergot_EASG ergot alk 96.1 0.065 1.4E-06 43.5 9.5 96 73-173 1-105 (285)
447 TIGR02415 23BDH acetoin reduct 96.1 0.037 8E-07 44.0 8.0 77 72-150 1-87 (254)
448 KOG4022 Dihydropteridine reduc 96.1 0.039 8.5E-07 40.3 7.1 97 71-174 3-131 (236)
449 COG1052 LdhA Lactate dehydroge 96.1 0.093 2E-06 43.5 10.3 88 70-173 145-237 (324)
450 PRK13243 glyoxylate reductase; 96.1 0.079 1.7E-06 44.2 10.1 37 70-107 149-185 (333)
451 cd01487 E1_ThiF_like E1_ThiF_l 96.1 0.05 1.1E-06 40.9 8.1 33 73-105 1-33 (174)
452 PLN02686 cinnamoyl-CoA reducta 96.1 0.044 9.5E-07 46.4 8.7 45 68-113 50-95 (367)
453 cd01485 E1-1_like Ubiquitin ac 96.1 0.071 1.5E-06 41.0 9.1 34 71-104 19-52 (198)
454 TIGR01289 LPOR light-dependent 96.1 0.046 1E-06 45.2 8.6 78 71-150 3-91 (314)
455 PRK05565 fabG 3-ketoacyl-(acyl 96.0 0.044 9.4E-07 43.3 8.2 78 71-150 5-93 (247)
456 PRK14192 bifunctional 5,10-met 96.0 0.075 1.6E-06 43.2 9.5 81 64-174 151-233 (283)
457 PRK07370 enoyl-(acyl carrier p 96.0 0.034 7.4E-07 44.5 7.6 103 70-175 5-150 (258)
458 PLN00016 RNA-binding protein; 96.0 0.1 2.2E-06 44.4 10.8 95 71-173 52-165 (378)
459 PRK05562 precorrin-2 dehydroge 96.0 0.052 1.1E-06 42.3 8.2 93 70-173 24-117 (223)
460 PRK07578 short chain dehydroge 96.0 0.17 3.7E-06 38.6 11.2 63 73-150 2-65 (199)
461 PRK11188 rrmJ 23S rRNA methylt 96.0 0.16 3.5E-06 39.4 10.9 97 68-171 49-164 (209)
462 PRK08300 acetaldehyde dehydrog 96.0 0.11 2.4E-06 42.4 10.3 92 72-171 5-100 (302)
463 TIGR02632 RhaD_aldol-ADH rhamn 96.0 0.036 7.9E-07 50.9 8.4 79 70-150 413-503 (676)
464 PRK05855 short chain dehydroge 96.0 0.035 7.7E-07 49.8 8.3 79 70-150 314-402 (582)
465 COG2084 MmsB 3-hydroxyisobutyr 96.0 0.13 2.9E-06 41.6 10.6 88 73-174 2-97 (286)
466 PRK12550 shikimate 5-dehydroge 96.0 0.038 8.2E-07 44.7 7.5 70 67-150 118-188 (272)
467 PRK12745 3-ketoacyl-(acyl-carr 96.0 0.05 1.1E-06 43.3 8.3 77 72-150 3-90 (256)
468 PF07991 IlvN: Acetohydroxy ac 96.0 0.22 4.8E-06 36.6 10.6 85 70-169 3-92 (165)
469 PF02719 Polysacc_synt_2: Poly 96.0 0.063 1.4E-06 43.6 8.7 74 74-152 1-89 (293)
470 PLN02233 ubiquinone biosynthes 96.0 0.12 2.7E-06 41.5 10.5 102 64-174 67-184 (261)
471 COG0569 TrkA K+ transport syst 95.9 0.076 1.7E-06 41.7 8.9 82 73-161 2-86 (225)
472 PRK05447 1-deoxy-D-xylulose 5- 95.9 0.13 2.8E-06 43.4 10.7 94 72-170 2-120 (385)
473 PRK08655 prephenate dehydrogen 95.9 0.11 2.3E-06 45.2 10.6 87 73-173 2-93 (437)
474 PRK02472 murD UDP-N-acetylmura 95.9 0.048 1E-06 47.5 8.6 71 70-150 4-78 (447)
475 PRK08220 2,3-dihydroxybenzoate 95.9 0.045 9.7E-07 43.4 7.8 74 70-150 7-86 (252)
476 PRK14027 quinate/shikimate deh 95.9 0.037 8E-07 45.0 7.3 44 69-112 125-168 (283)
477 PF01408 GFO_IDH_MocA: Oxidore 95.9 0.26 5.6E-06 34.2 10.7 88 73-173 2-93 (120)
478 PRK08936 glucose-1-dehydrogena 95.9 0.061 1.3E-06 43.0 8.5 79 70-150 6-95 (261)
479 PRK14189 bifunctional 5,10-met 95.9 0.098 2.1E-06 42.4 9.4 83 62-174 148-232 (285)
480 PRK07340 ornithine cyclodeamin 95.9 0.063 1.4E-06 44.2 8.6 93 69-175 123-220 (304)
481 PF08659 KR: KR domain; Inter 95.9 0.05 1.1E-06 41.1 7.4 32 73-104 2-34 (181)
482 PRK14188 bifunctional 5,10-met 95.9 0.12 2.7E-06 42.1 10.0 93 50-174 137-232 (296)
483 PLN02653 GDP-mannose 4,6-dehyd 95.9 0.026 5.6E-07 47.2 6.4 36 70-106 5-41 (340)
484 PRK03659 glutathione-regulated 95.8 0.073 1.6E-06 48.2 9.6 92 72-170 401-496 (601)
485 PRK08416 7-alpha-hydroxysteroi 95.8 0.074 1.6E-06 42.6 8.7 78 70-149 7-96 (260)
486 PLN02490 MPBQ/MSBQ methyltrans 95.8 0.087 1.9E-06 44.0 9.2 99 69-173 112-216 (340)
487 PRK12935 acetoacetyl-CoA reduc 95.8 0.07 1.5E-06 42.2 8.5 79 70-150 5-94 (247)
488 TIGR01829 AcAcCoA_reduct aceto 95.8 0.062 1.4E-06 42.3 8.2 77 72-150 1-88 (242)
489 TIGR03466 HpnA hopanoid-associ 95.8 0.028 6E-07 46.5 6.4 70 73-149 2-73 (328)
490 PLN02896 cinnamyl-alcohol dehy 95.8 0.074 1.6E-06 44.7 9.1 43 68-111 7-50 (353)
491 PRK12825 fabG 3-ketoacyl-(acyl 95.8 0.081 1.7E-06 41.7 8.9 78 70-149 5-93 (249)
492 TIGR00872 gnd_rel 6-phosphoglu 95.8 0.22 4.8E-06 40.9 11.5 43 73-116 2-44 (298)
493 PRK15469 ghrA bifunctional gly 95.8 0.071 1.5E-06 44.1 8.6 88 70-173 135-227 (312)
494 PRK07889 enoyl-(acyl carrier p 95.8 0.077 1.7E-06 42.4 8.7 79 70-150 6-95 (256)
495 PRK15461 NADH-dependent gamma- 95.8 0.17 3.7E-06 41.5 10.8 43 73-116 3-45 (296)
496 PRK00216 ubiE ubiquinone/menaq 95.8 0.066 1.4E-06 42.1 8.2 104 64-174 45-160 (239)
497 PRK11064 wecC UDP-N-acetyl-D-m 95.8 0.2 4.4E-06 43.2 11.7 73 72-151 4-86 (415)
498 PRK06849 hypothetical protein; 95.8 0.12 2.6E-06 44.1 10.2 92 71-163 4-99 (389)
499 PRK12746 short chain dehydroge 95.8 0.065 1.4E-06 42.6 8.2 79 70-150 5-100 (254)
500 PRK07069 short chain dehydroge 95.8 0.058 1.3E-06 42.7 7.8 75 74-150 2-89 (251)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.4e-41 Score=273.29 Aligned_cols=238 Identities=27% Similarity=0.407 Sum_probs=209.3
Q ss_pred CCCCCCccccCCcccc-------cccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEE
Q 025264 2 MNDRKSRFSINGKPIY-------HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIV 74 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~-------~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~v 74 (255)
.+|+.|.+|..|...+ ++..+|+||||+++|+.+++++|+++++++||.+.|++.|.|++| +..+++||++|
T Consensus 92 ~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V 170 (339)
T COG1064 92 ISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKANVKPGKWV 170 (339)
T ss_pred CCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEE
Confidence 4688899999886444 556679999999999999999999999999999999999999998 66999999999
Q ss_pred EEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHH
Q 025264 75 AVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVM 154 (255)
Q Consensus 75 lI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~ 154 (255)
+|.|.|++|++++|+|+.+|+ +|++++++++|.++++++|++++++.++ ++..+.+++. +|+++|+++ +..+
T Consensus 171 ~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~~--~~~~~~~~~~----~d~ii~tv~-~~~~ 242 (339)
T COG1064 171 AVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSD--SDALEAVKEI----ADAIIDTVG-PATL 242 (339)
T ss_pred EEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcCC--chhhHHhHhh----CcEEEECCC-hhhH
Confidence 999999999999999999998 9999999999999999999999999776 7787777763 999999999 6669
Q ss_pred HHHHHHhccCCceEEEEccCCCCCccccCchhhc-cCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecch
Q 025264 155 RAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGE 233 (255)
Q Consensus 155 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (255)
+.+++.|+++ |+++++|........+++...+. +++++.|+..++. .++++++++..+|++.+. +.+.+++++
T Consensus 243 ~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~---~d~~e~l~f~~~g~Ikp~--i~e~~~l~~ 316 (339)
T COG1064 243 EPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR---ADLEEALDFAAEGKIKPE--ILETIPLDE 316 (339)
T ss_pred HHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCH---HHHHHHHHHHHhCCceee--EEeeECHHH
Confidence 9999999997 99999999742233446566554 4999999998764 789999999999996654 436899999
Q ss_pred HHHHHHHhhCCCee-EEEEecC
Q 025264 234 INEAFRYMHGGDCL-RCVLKMQ 254 (255)
Q Consensus 234 ~~~a~~~~~~~~~~-k~vi~~~ 254 (255)
+++|++.|.+++.. |+||.+.
T Consensus 317 in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 317 INEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred HHHHHHHHHcCCeeeEEEecCC
Confidence 99999999999877 9999875
No 2
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.3e-41 Score=260.14 Aligned_cols=250 Identities=74% Similarity=1.266 Sum_probs=234.5
Q ss_pred CCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHH
Q 025264 4 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVG 83 (255)
Q Consensus 4 ~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG 83 (255)
++.++|.-.|+.++.|++-.+|+||.+++...+.++++..+++.++++.+.+.|+|.|..+.++++||+++.|+|-|++|
T Consensus 126 DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VG 205 (375)
T KOG0022|consen 126 DGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVG 205 (375)
T ss_pred CCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHH
Confidence 45666655577787777777999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhcc
Q 025264 84 LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 163 (255)
Q Consensus 84 ~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~ 163 (255)
+++++-++..|++++|+++.+++|.+.++++|+++.+|+.+....+.+.+++.|++++|+.|||+|....+++++.+...
T Consensus 206 Lav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~ 285 (375)
T KOG0022|consen 206 LAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHK 285 (375)
T ss_pred HHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999986556788999999999999999999999999999999999
Q ss_pred CCceEEEEccCCCCCccccCchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhC
Q 025264 164 GWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG 243 (255)
Q Consensus 164 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 243 (255)
++|+-+.+|....+..+++.++.+++++++.|+.+++++.+.+++.+++.+.++.+++.++|++++||++|++||+.|.+
T Consensus 286 GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~ 365 (375)
T KOG0022|consen 286 GWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHE 365 (375)
T ss_pred CCCeEEEEEecCCCcccccchhhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhC
Confidence 88999999999888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEec
Q 025264 244 GDCLRCVLKM 253 (255)
Q Consensus 244 ~~~~k~vi~~ 253 (255)
++.+|.|+.+
T Consensus 366 GksiR~vl~~ 375 (375)
T KOG0022|consen 366 GKSIRCVLWM 375 (375)
T ss_pred CceEEEEEeC
Confidence 9999988864
No 3
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.5e-40 Score=273.08 Aligned_cols=244 Identities=22% Similarity=0.331 Sum_probs=206.8
Q ss_pred CCCCCCccccCCccccccc---CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEc
Q 025264 2 MNDRKSRFSINGKPIYHFM---GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG 78 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~---~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G 78 (255)
+|+++.+|++ ||+|+... .+|+|+||+.+|++.++++|+++|+++||+++++++|||+++....++++|++|||+|
T Consensus 72 vG~~V~~~~~-GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~g 150 (326)
T COG0604 72 VGSGVTGFKV-GDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHG 150 (326)
T ss_pred eCCCCCCcCC-CCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 4788999978 99999875 5799999999999999999999999999999999999999999999999999999998
Q ss_pred C-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHH
Q 025264 79 L-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRA 156 (255)
Q Consensus 79 ~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~ 156 (255)
+ |+||.+++|+|+++|+ .+++++.++++.++++++|+++++++++ +++.+.+++++++ ++|+|||++|++. +..
T Consensus 151 aaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~ 226 (326)
T COG0604 151 AAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE--EDFVEQVRELTGGKGVDVVLDTVGGDT-FAA 226 (326)
T ss_pred CCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHcCCCCceEEEECCCHHH-HHH
Confidence 6 9999999999999998 8888888888888999999999999998 8899999999999 9999999999999 999
Q ss_pred HHHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCC---CccCcHHHHHHHHHcCCCCCCCcceeeeecc
Q 025264 157 ALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF---KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLG 232 (255)
Q Consensus 157 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (255)
++++++++ |+++.+|..++....+++...+.. .....|+..... ...+.+.++.+++++|.+++ .+..+||++
T Consensus 227 ~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~--~i~~~~~l~ 303 (326)
T COG0604 227 SLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKP--VIDRVYPLA 303 (326)
T ss_pred HHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcc--eeccEechh
Confidence 99999997 999999997533344455555544 777777765533 11346677999999999655 466899999
Q ss_pred hHHHHHHHhhC-CCee-EEEEec
Q 025264 233 EINEAFRYMHG-GDCL-RCVLKM 253 (255)
Q Consensus 233 ~~~~a~~~~~~-~~~~-k~vi~~ 253 (255)
+..++...... ++.. |+||++
T Consensus 304 e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 304 EAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred hhHHHHHHHHcccCCcceEEEeC
Confidence 96555553322 3554 999874
No 4
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.6e-40 Score=260.06 Aligned_cols=231 Identities=64% Similarity=1.108 Sum_probs=219.2
Q ss_pred cCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEE
Q 025264 20 MGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVI 99 (255)
Q Consensus 20 ~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~ 99 (255)
.+.++|+||.++++..++|+++..+++.++++.|...|.+.+..+.+++++|++|.|.|.|++|++++|-|+..|+.+++
T Consensus 135 lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~Ii 214 (366)
T COG1062 135 LGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRII 214 (366)
T ss_pred eccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEE
Confidence 33469999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCcchHHHHHhcCCcEEeCCCCCCc-hHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCC
Q 025264 100 GIDIDPKKFDRAKNFGVTEFVNPKDHDK-PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 178 (255)
Q Consensus 100 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 178 (255)
+++.+++|+++++++|+++++|+++ . ++.+.+.++|++++|++|||+|....++.++.++.++ |+.+.+|......
T Consensus 215 AvD~~~~Kl~~A~~fGAT~~vn~~~--~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~ 291 (366)
T COG1062 215 AVDINPEKLELAKKFGATHFVNPKE--VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQ 291 (366)
T ss_pred EEeCCHHHHHHHHhcCCceeecchh--hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCc
Confidence 9999999999999999999999987 6 6999999999989999999999999999999999995 9999999988777
Q ss_pred ccccCchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEec
Q 025264 179 EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 253 (255)
Q Consensus 179 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 253 (255)
.++++...+..+.+++|+.+++...+.++..+++++.+|++.+.++++++++|+||+|||+.+.+++.+|-||++
T Consensus 292 ~i~~~~~~lv~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 292 EISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred eeecChHHeeccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 788888888889999999999998889999999999999999999999999999999999999999999888864
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.9e-38 Score=245.55 Aligned_cols=226 Identities=25% Similarity=0.382 Sum_probs=197.2
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
+|++++|++.++++++|+|+++|++++|++. ++++++||. +++.+++|.+|||+|+|++|+.+...|+.+|+.+|+++
T Consensus 123 ~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~ 200 (354)
T KOG0024|consen 123 DGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVIT 200 (354)
T ss_pred CCceEEEEEechHheeeCCCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEe
Confidence 3999999999999999999999999999998 799999985 89999999999999999999999999999999999999
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCC--chHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCC
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHD--KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 178 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~--~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 178 (255)
+-.++|++.++++|++.+.+..... +.+.+.+.+..+. .+|++|||+|....++.++..++.+ |+++++|... .
T Consensus 201 d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~--~ 277 (354)
T KOG0024|consen 201 DLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGA--E 277 (354)
T ss_pred ecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCC--C
Confidence 9999999999999999876554411 3455566666655 6999999999999899999999997 9999998843 5
Q ss_pred ccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCC--eeEEEEecCC
Q 025264 179 EISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD--CLRCVLKMQD 255 (255)
Q Consensus 179 ~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~k~vi~~~~ 255 (255)
..+++...... ++.+.|++-+-. .++..+++++++|++++++++++.|++++.++||+.+..+. .+|+++..++
T Consensus 278 ~~~fpi~~v~~kE~~~~g~fry~~---~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 278 EIQFPIIDVALKEVDLRGSFRYCN---GDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred ccccChhhhhhheeeeeeeeeecc---ccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 56677666544 999999873322 48999999999999999999999999999999999988766 4599998764
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.9e-37 Score=261.28 Aligned_cols=225 Identities=41% Similarity=0.680 Sum_probs=198.4
Q ss_pred cceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 025264 23 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 102 (255)
Q Consensus 23 g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~ 102 (255)
|+|+||+.+++.+++++|++++++++++++++++|||+++.+...++++++|||+|+|++|++++|+|+..|+.+|++++
T Consensus 144 G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~ 223 (371)
T cd08281 144 SAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVD 223 (371)
T ss_pred ccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEc
Confidence 79999999999999999999999999999999999999988888999999999999999999999999999995699999
Q ss_pred CCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcccc
Q 025264 103 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 182 (255)
Q Consensus 103 ~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~ 182 (255)
+++++++.++++|+++++++.+ +++.+.+++.+++++|++|||+|.+..+..++++++++ |+++.+|........++
T Consensus 224 ~~~~r~~~a~~~Ga~~~i~~~~--~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~ 300 (371)
T cd08281 224 LNEDKLALARELGATATVNAGD--PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSV 300 (371)
T ss_pred CCHHHHHHHHHcCCceEeCCCc--hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeee
Confidence 9999999999999999999887 78888888887668999999999877699999999997 99999997643234456
Q ss_pred Cchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEE
Q 025264 183 RPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCV 250 (255)
Q Consensus 183 ~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~v 250 (255)
+...++. ++++.|++.+.+...+++.++++++.+|++++.++++++|+|+++++||+.+.+++..|.|
T Consensus 301 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~v 369 (371)
T cd08281 301 PALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQV 369 (371)
T ss_pred cHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeee
Confidence 6655555 9999998876554446788999999999998888889999999999999999988877444
No 7
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.8e-38 Score=239.89 Aligned_cols=244 Identities=19% Similarity=0.232 Sum_probs=208.7
Q ss_pred CCCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-C
Q 025264 2 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-G 80 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 80 (255)
+|.+++++.+ ||+|.-....|.|+|+..+|...++++|+.+++++||++...++|||..+.+...++||++||++.+ |
T Consensus 79 vG~gvtdrkv-GDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAG 157 (336)
T KOG1197|consen 79 VGEGVTDRKV-GDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAG 157 (336)
T ss_pred ecCCcccccc-ccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccc
Confidence 5889999999 9999877788999999999999999999999999999999999999999999999999999999975 9
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHH
Q 025264 81 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 159 (255)
Q Consensus 81 ~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~ 159 (255)
++|++++|+++..|+ .+|+++.+.+|++.+++.|+++.|+++. +++.+++.++|+| |+|.++|.+|... +..++.
T Consensus 158 GVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~--eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~ 233 (336)
T KOG1197|consen 158 GVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST--EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLA 233 (336)
T ss_pred cHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc--hhHHHHHHhccCCCCceeeeccccchh-hHHHHH
Confidence 999999999999999 9999999999999999999999999998 9999999999988 9999999999998 999999
Q ss_pred HhccCCceEEEEccCCCCCccccCchhhcc-CcEEE-EeeeCCCCccC----cHHHHHHHHHcCCCCCCCcceeeeecch
Q 025264 160 CCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK-GTAFGGFKSRS----QVPWLVDKYMKKEIKVDEYVTHNMTLGE 233 (255)
Q Consensus 160 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~-g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (255)
+|++. |+++.+|..++. .-+++...+.- .+++. .+.++....+. ...+++.++.+|.+++. |.++|||++
T Consensus 234 ~Lk~~-G~mVSfG~asgl-~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~ 309 (336)
T KOG1197|consen 234 ALKPM-GKMVSFGNASGL-IDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSK 309 (336)
T ss_pred HhccC-ceEEEeccccCC-CCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHH
Confidence 99997 999999997543 22333333222 33332 22223222222 34577888889996554 889999999
Q ss_pred HHHHHHHhhCCCee-EEEEecC
Q 025264 234 INEAFRYMHGGDCL-RCVLKMQ 254 (255)
Q Consensus 234 ~~~a~~~~~~~~~~-k~vi~~~ 254 (255)
+.+|++.++++... |+++.+.
T Consensus 310 vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 310 VADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred HHHHHHHHHhhhccceEEEeCC
Confidence 99999999988766 9998764
No 8
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=4.6e-37 Score=258.45 Aligned_cols=231 Identities=67% Similarity=1.168 Sum_probs=195.0
Q ss_pred cceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 025264 23 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 102 (255)
Q Consensus 23 g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~ 102 (255)
|+|+||+++|+++++++|+++++++++++++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|+.+|++++
T Consensus 138 G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~ 217 (368)
T TIGR02818 138 STFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAID 217 (368)
T ss_pred ccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 69999999999999999999999999999999999999988888999999999999999999999999999986799999
Q ss_pred CCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcccc
Q 025264 103 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 182 (255)
Q Consensus 103 ~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~ 182 (255)
+++++++.++++|++.++++.+.+.++.+.+++.+++++|++|||+|.+..+...++++++++|+++.+|........++
T Consensus 218 ~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~ 297 (368)
T TIGR02818 218 INPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEIST 297 (368)
T ss_pred CCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccc
Confidence 99999999999999999987642245677787777668999999999877789999999873399999998543233344
Q ss_pred CchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEec
Q 025264 183 RPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 253 (255)
Q Consensus 183 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 253 (255)
+...+..+..+.++..+......++.++++++.+++++++++++++|||+++++|++.+.+++..|++|.+
T Consensus 298 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 298 RPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred cHHHHhccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 44444445557777654433345789999999999998888899999999999999999887777999875
No 9
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=4.4e-37 Score=257.91 Aligned_cols=228 Identities=36% Similarity=0.589 Sum_probs=199.5
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
.|+|+||+.+++.+++++|+++++++++++++++.|||+++.+...++++++|||+|+|++|++++|+|+..|+.+|+++
T Consensus 128 ~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~ 207 (358)
T TIGR03451 128 IGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAV 207 (358)
T ss_pred cccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 58999999999999999999999999999999999999988888899999999999999999999999999999459999
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 180 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 180 (255)
+++++++++++++|++.++++.+ +++.+.+.+.+++ ++|++|||+|++..+..++++++++ |+++.+|........
T Consensus 208 ~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~ 284 (358)
T TIGR03451 208 DIDDRKLEWAREFGATHTVNSSG--TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTL 284 (358)
T ss_pred cCCHHHHHHHHHcCCceEEcCCC--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCcee
Confidence 99999999999999999999887 7888889888887 8999999999876699999999997 999999986432334
Q ss_pred ccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEe
Q 025264 181 STRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 252 (255)
Q Consensus 181 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 252 (255)
+++...++. +.++.+++.+.....++++++++++.+|++++.++++++||++++++|++.+.+++..|+++.
T Consensus 285 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 285 ELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred eccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence 555544544 889988865443344678999999999999888888999999999999999988877788875
No 10
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.1e-36 Score=257.31 Aligned_cols=232 Identities=51% Similarity=0.985 Sum_probs=198.6
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
+|+|+||++++...++++|+++++++++++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++
T Consensus 150 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~ 229 (381)
T PLN02740 150 TSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGV 229 (381)
T ss_pred CccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEE
Confidence 48999999999999999999999999999999999999988788899999999999999999999999999998569999
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccc
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 181 (255)
++++++.+.++++|++.++++.+.+.++.+.+++.+++++|++||++|.+..+..+++++++++|+++.+|.......++
T Consensus 230 ~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~ 309 (381)
T PLN02740 230 DINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLP 309 (381)
T ss_pred cCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceec
Confidence 99999999999999999998775113477788887766899999999987779999999988229999999864322334
Q ss_pred cCchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEec
Q 025264 182 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 253 (255)
Q Consensus 182 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 253 (255)
++...++++.++.|+..+.+....++.++++++.++.+++.+.++++|+|+++++|++.+.+++.+|++|+.
T Consensus 310 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 310 LHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred ccHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 444434458899998876654445789999999999988888889999999999999999888778999863
No 11
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=2e-36 Score=254.76 Aligned_cols=231 Identities=79% Similarity=1.266 Sum_probs=196.3
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
.|+|+||+.+++.+++++|+++++++++++++++.|||+++.+...++++++|||+|+|++|++++|+|+.+|+.+|+++
T Consensus 138 ~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~ 217 (368)
T cd08300 138 TSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGI 217 (368)
T ss_pred cccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 36899999999999999999999999999999999999998788899999999999999999999999999999569999
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccc
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 181 (255)
++++++.+.++++|+++++++.+.++++.+.+.+.+++++|+|||++|++..+..+++++++++|+++.+|........+
T Consensus 218 ~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~ 297 (368)
T cd08300 218 DINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEIS 297 (368)
T ss_pred eCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccc
Confidence 99999999999999999998875112577888888776899999999987669999999987339999999764322333
Q ss_pred cCchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEe
Q 025264 182 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 252 (255)
Q Consensus 182 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 252 (255)
++...+....++.++..+.+....++.++++++.++++++.++++++|+|+++++||+.+.+++..|++++
T Consensus 298 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 298 TRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred cCHHHHhhcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 33433444557777776666555788999999999999887888999999999999999988877799874
No 12
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.6e-36 Score=254.41 Aligned_cols=231 Identities=54% Similarity=1.017 Sum_probs=196.3
Q ss_pred cceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 025264 23 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 102 (255)
Q Consensus 23 g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~ 102 (255)
|+|+||+.+++..++++|+++++++++++++++.++|+++.+..++++|++|||+|+|++|++++|+++.+|+..|++++
T Consensus 146 G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~ 225 (378)
T PLN02827 146 SSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVD 225 (378)
T ss_pred ccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEC
Confidence 89999999999999999999999999999989899998877778899999999999999999999999999984588888
Q ss_pred CCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcccc
Q 025264 103 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 182 (255)
Q Consensus 103 ~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~ 182 (255)
+++++.++++++|+++++++++.++++.+.+++.+++++|++||++|.+..+...++.+++++|+++.+|..... ..+
T Consensus 226 ~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~--~~~ 303 (378)
T PLN02827 226 INPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK--PEV 303 (378)
T ss_pred CCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC--ccc
Confidence 899999999999999999877412367777887776689999999998766899999999932999999986432 233
Q ss_pred Cc--hhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEecCC
Q 025264 183 RP--FQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQD 255 (255)
Q Consensus 183 ~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~~~ 255 (255)
+. ..++++.++.|+....+....++++++++++++++++.++++++|+|+++++|++.+.+++.+|+||.+.+
T Consensus 304 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~~ 378 (378)
T PLN02827 304 SAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMPK 378 (378)
T ss_pred cccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEecC
Confidence 22 23445999999887655444578899999999998887788999999999999999988877899998753
No 13
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=9.1e-36 Score=250.96 Aligned_cols=230 Identities=61% Similarity=1.132 Sum_probs=198.1
Q ss_pred cceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 025264 23 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 102 (255)
Q Consensus 23 g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~ 102 (255)
|+|+||++++..+++++|+++++++++++++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|+.+|++++
T Consensus 140 G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~ 219 (369)
T cd08301 140 STFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVD 219 (369)
T ss_pred ccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 78999999999999999999999999999999999999888888999999999999999999999999999985799999
Q ss_pred CCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcccc
Q 025264 103 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 182 (255)
Q Consensus 103 ~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~ 182 (255)
+++++.+.++++|++.++++.+.++++.+.+++.+++++|++||++|.+..+...++++++++|+++.+|.......+++
T Consensus 220 ~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~ 299 (369)
T cd08301 220 LNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFST 299 (369)
T ss_pred CCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCccccc
Confidence 99999999999999989887642235777777777668999999999887689999999992289999998653334445
Q ss_pred CchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEe
Q 025264 183 RPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 252 (255)
Q Consensus 183 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 252 (255)
+...+++++++.|+..+.+..+.+++++++++.++.+++.+.++++|||+++++|++.+.+++.+|+++.
T Consensus 300 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 369 (369)
T cd08301 300 HPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCILH 369 (369)
T ss_pred CHHHHhcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEeC
Confidence 5444556899999887766555678999999999998887788899999999999999998888898873
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=7.1e-36 Score=248.99 Aligned_cols=221 Identities=27% Similarity=0.423 Sum_probs=191.7
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
+|+|+||+.+++.+++++|+++++++++++++++.|||+++ ....++++++|||+|+|++|++++|+++.+|+++|+++
T Consensus 116 ~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~ 194 (339)
T cd08239 116 DGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGV 194 (339)
T ss_pred CCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 58999999999999999999999999999999999999987 56789999999999999999999999999999339999
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 180 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 180 (255)
++++++.+.++++|++.++++++ .+ .+.+.+.+++ ++|++|||+|++..+..++++++++ |+++.+|.... .
T Consensus 195 ~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~-- 267 (339)
T cd08239 195 DPSPERLELAKALGADFVINSGQ--DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-L-- 267 (339)
T ss_pred CCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-c--
Confidence 99999999999999999999876 66 7778888777 8999999999988678999999997 99999997532 2
Q ss_pred ccCc-hhhc-cCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEec
Q 025264 181 STRP-FQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 253 (255)
Q Consensus 181 ~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 253 (255)
+++. ..++ +++++.|++.... ++++++++++.++.+.+.+.++++|+++++++|++.+.++...|+||++
T Consensus 268 ~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 268 TIEVSNDLIRKQRTLIGSWYFSV---PDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred ccCcHHHHHhCCCEEEEEecCCH---HHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 2222 2333 4899999875432 5789999999999988888889999999999999998887656999875
No 15
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=2.3e-35 Score=248.06 Aligned_cols=230 Identities=62% Similarity=1.099 Sum_probs=196.2
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
.|+|+||+++++++++++|+++++++++++++++.|||+++.+..+++++++|+|+|+|++|++++|+++.+|+.+|+++
T Consensus 136 ~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~ 215 (365)
T cd08277 136 TSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGV 215 (365)
T ss_pred cccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 47999999999999999999999999999999999999988888899999999999999999999999999998569999
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccc
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 181 (255)
++++++++.++++|+++++++.+.+.++.+.+++.+++++|++|||+|.+..+..+++++++++|+++.+|.... ...+
T Consensus 216 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~ 294 (365)
T cd08277 216 DINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELS 294 (365)
T ss_pred eCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccc
Confidence 999999999999999999987652234567777776668999999999877689999999872399999998642 2334
Q ss_pred cCchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEe
Q 025264 182 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 252 (255)
Q Consensus 182 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 252 (255)
++...+..+.++.|+..+++....++.++++++.++.+++.++++++|+|+++++|++.+.+++.+|++++
T Consensus 295 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 295 IRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred cCHhHHhhCCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 44444545888998887766544678999999999998888888999999999999999888776799874
No 16
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-34 Score=242.02 Aligned_cols=219 Identities=20% Similarity=0.287 Sum_probs=183.2
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
+|+|+||+++++..++++|++++++++++. .++++||+++ ......++++|+|+|+|++|++++|+++.+|+++|+++
T Consensus 123 ~G~~aey~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~ 200 (343)
T PRK09880 123 DGGFTRYKVVDTAQCIPYPEKADEKVMAFA-EPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCA 200 (343)
T ss_pred CCceeeeEEechHHeEECCCCCCHHHHHhh-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE
Confidence 599999999999999999999998876644 4788999987 44566789999999999999999999999999668999
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccc
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 181 (255)
++++++++.++++|+++++++++ +++.+.. +. .+++|++|||+|.+..++.++++++++ |+++.+|.... ..+
T Consensus 201 ~~~~~~~~~a~~lGa~~vi~~~~--~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~ 273 (343)
T PRK09880 201 DVSPRSLSLAREMGADKLVNPQN--DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA--PPE 273 (343)
T ss_pred eCCHHHHHHHHHcCCcEEecCCc--ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCc
Confidence 99999999999999999999876 5554333 22 236999999999876689999999997 99999997432 334
Q ss_pred cCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 182 TRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 182 ~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
++...++. ++++.|+... .+++++++++++++++++.++++++|+++++++|++.+.+++.. |++|.+
T Consensus 274 ~~~~~~~~k~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 274 FPMMTLIVKEISLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred cCHHHHHhCCcEEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 55555544 8899887632 35799999999999998878888999999999999999877654 999874
No 17
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-34 Score=226.34 Aligned_cols=237 Identities=27% Similarity=0.404 Sum_probs=201.1
Q ss_pred CCCCCccccCCcccccc--------------cCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCC
Q 025264 3 NDRKSRFSINGKPIYHF--------------MGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKV 68 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~--------------~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~ 68 (255)
.|..|++|..|+..++. ..+|+||+|+++++.++.++|++++++.||.+.|+..|+|..| ....+
T Consensus 101 sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~ 179 (360)
T KOG0023|consen 101 SCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGL 179 (360)
T ss_pred cccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCC
Confidence 45666666666654432 1236699999999999999999999999999999999999987 77888
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCc-chHHHHHhcCCcEEeCCC-CCCchHHHHHHhhcCCCccEEEe
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPK-DHDKPIQQVLVDLTDGGVDYSFE 146 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~-~~~~~~~~~g~~~vi~~~-~~~~~~~~~i~~~~~~~~d~v~d 146 (255)
.||+++.|.|+|++|++++|+|+++|. +|++++++. +|.+.++.+|++..++.. + ++..+++.+.+++++|-|.+
T Consensus 180 ~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~d--~d~~~~~~~~~dg~~~~v~~ 256 (360)
T KOG0023|consen 180 GPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTED--PDIMKAIMKTTDGGIDTVSN 256 (360)
T ss_pred CCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecCC--HHHHHHHHHhhcCcceeeee
Confidence 899999999997799999999999999 999999988 555556889999888877 5 89999999988777888776
Q ss_pred cCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcc
Q 025264 147 CIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYV 225 (255)
Q Consensus 147 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (255)
. ....++.++++++.+ |++|++|.... +..++..++.. .+++.|+.+++. ++.++++++..++.+.+. +
T Consensus 257 ~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I~GS~vG~~---ket~E~Ldf~a~~~ik~~--I 326 (360)
T KOG0023|consen 257 L--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSIKGSIVGSR---KETQEALDFVARGLIKSP--I 326 (360)
T ss_pred c--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEEEeeccccH---HHHHHHHHHHHcCCCcCc--e
Confidence 6 445589999999997 99999999643 66777777655 999999998866 789999999999997654 4
Q ss_pred eeeeecchHHHHHHHhhCCCee-EEEEecC
Q 025264 226 THNMTLGEINEAFRYMHGGDCL-RCVLKMQ 254 (255)
Q Consensus 226 ~~~~~~~~~~~a~~~~~~~~~~-k~vi~~~ 254 (255)
+..+++++++|++.+.+++.. |.||.+.
T Consensus 327 -E~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 327 -ELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred -EEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 689999999999999999877 9999864
No 18
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=3.9e-34 Score=239.23 Aligned_cols=246 Identities=17% Similarity=0.255 Sum_probs=200.5
Q ss_pred CCCCCCccccCCccccccc---------------------------CccceeeEEEEcCCceEEcCCCCCcccccccccc
Q 025264 2 MNDRKSRFSINGKPIYHFM---------------------------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 54 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~---------------------------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~ 54 (255)
.|+++.+|++ ||+|+.+. ..|+|+||+.+++..++++|+++++++++.++ +
T Consensus 68 vG~~v~~~~v-Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~ 145 (347)
T PRK10309 68 VGSGVDDLHP-GDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-P 145 (347)
T ss_pred eCCCCCCCCC-CCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-H
Confidence 3567777888 88887542 25899999999999999999999999998875 5
Q ss_pred hhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHH
Q 025264 55 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 134 (255)
Q Consensus 55 ~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~ 134 (255)
++++++++ +...++++++|+|+|+|++|++++|+|+.+|+..|+++++++++.+.++++|+++++++++ .. .+.+.
T Consensus 146 ~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~-~~~~~ 221 (347)
T PRK10309 146 ITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE--MS-APQIQ 221 (347)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--cC-HHHHH
Confidence 66788874 6778899999999999999999999999999944788999999999999999999998875 45 55677
Q ss_pred hhcCC-Ccc-EEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcccc-Cchhhc-cCcEEEEeeeCCCC--ccCcHH
Q 025264 135 DLTDG-GVD-YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST-RPFQLV-TGRVWKGTAFGGFK--SRSQVP 208 (255)
Q Consensus 135 ~~~~~-~~d-~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~-~~~~~~g~~~~~~~--~~~~~~ 208 (255)
+.+.+ ++| ++|||+|.+..+..++++++++ |+++.+|.......++. +...++ +++++.|+..+... ..++++
T Consensus 222 ~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 300 (347)
T PRK10309 222 SVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWE 300 (347)
T ss_pred HHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHH
Confidence 77766 898 9999999887789999999997 99999997643211111 122344 48999998764321 235788
Q ss_pred HHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEecC
Q 025264 209 WLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 254 (255)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~~ 254 (255)
++++++++|.++++++++++|+|+++++|++.+.+++.. |+++++.
T Consensus 301 ~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 301 TASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred HHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 999999999998888899999999999999999887755 9999763
No 19
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.4e-34 Score=240.10 Aligned_cols=242 Identities=20% Similarity=0.296 Sum_probs=198.2
Q ss_pred CCCCCCccccCCcccccccCccceeeEEEEcCCc--eEE--cCCCCCcc-cccccccchhhhhhHHHhhcCCCCCCEEEE
Q 025264 2 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS--VAK--IDPQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 76 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~--~~~--~p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI 76 (255)
+|+++.+|++ ||+|+++ |+|+||..++... +++ +|++++++ ++|+++++++|||+++....++++|++|||
T Consensus 89 vg~~v~~~~~-Gd~V~~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV 164 (348)
T PLN03154 89 VDSDDPNFKP-GDLISGI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFV 164 (348)
T ss_pred EecCCCCCCC-CCEEEec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEE
Confidence 4567788999 9999864 6899999999753 544 48999986 688899999999999888889999999999
Q ss_pred EcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHH
Q 025264 77 FGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVM 154 (255)
Q Consensus 77 ~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~ 154 (255)
+|+ |++|++++|+|+.+|+ +|+++++++++.++++ ++|++.++++++ ..++.+.+++.+++++|++|||+|+.. +
T Consensus 165 ~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~~~gvD~v~d~vG~~~-~ 241 (348)
T PLN03154 165 SAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKE-EPDLDAALKRYFPEGIDIYFDNVGGDM-L 241 (348)
T ss_pred ecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCC-cccHHHHHHHHCCCCcEEEEECCCHHH-H
Confidence 998 9999999999999999 9999999999999997 799999999874 136778888777558999999999875 9
Q ss_pred HHHHHHhccCCceEEEEccCCCCCccc-----cCchhhc-cCcEEEEeeeCCCC--ccCcHHHHHHHHHcCCCCCCCcce
Q 025264 155 RAALECCHKGWGTSVIVGVAASGQEIS-----TRPFQLV-TGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVT 226 (255)
Q Consensus 155 ~~~~~~l~~~~G~~v~~g~~~~~~~~~-----~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 226 (255)
...+++++++ |+++.+|..... ..+ .+...++ +++++.|+....+. ..+.++++++++++|++++ .+.
T Consensus 242 ~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~ 317 (348)
T PLN03154 242 DAALLNMKIH-GRIAVCGMVSLN-SLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY--IED 317 (348)
T ss_pred HHHHHHhccC-CEEEEECccccC-CCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC--cee
Confidence 9999999997 999999975432 111 1333344 48889888754332 1245778999999999764 356
Q ss_pred eeeecchHHHHHHHhhCCCee-EEEEecC
Q 025264 227 HNMTLGEINEAFRYMHGGDCL-RCVLKMQ 254 (255)
Q Consensus 227 ~~~~~~~~~~a~~~~~~~~~~-k~vi~~~ 254 (255)
.+|+|+++++|++.+.+++.. |+||++.
T Consensus 318 ~~~~L~~~~~A~~~l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 318 MSEGLESAPAALVGLFSGKNVGKQVIRVA 346 (348)
T ss_pred cccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence 789999999999999988876 9999875
No 20
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=7.8e-33 Score=231.44 Aligned_cols=223 Identities=28% Similarity=0.418 Sum_probs=189.3
Q ss_pred ccceeeEEEEcCCceEEcCC------CCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC
Q 025264 22 TSTFSQYTVVHDVSVAKIDP------QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA 95 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~------~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~ 95 (255)
+|+|+||+.++.++++++|+ ++++++++.+++++.|||+++. ...++++++|+|+|+|++|++++|+|+..|+
T Consensus 113 ~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~ 191 (349)
T TIGR03201 113 QGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA 191 (349)
T ss_pred CCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 59999999999999999998 8999999999999999999874 5789999999999999999999999999999
Q ss_pred CeEEEEcCCcchHHHHHhcCCcEEeCCCCCC-chHHHHHHhhcCC-Ccc----EEEecCCcHHHHHHHHHHhccCCceEE
Q 025264 96 SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD-KPIQQVLVDLTDG-GVD----YSFECIGNVSVMRAALECCHKGWGTSV 169 (255)
Q Consensus 96 ~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~~i~~~~~~-~~d----~v~d~~g~~~~~~~~~~~l~~~~G~~v 169 (255)
+|++++++++++++++++|+++++++.+.+ +++.+.+++.+++ ++| ++|||+|.+..++.++++++++ |+++
T Consensus 192 -~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv 269 (349)
T TIGR03201 192 -AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLV 269 (349)
T ss_pred -eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEE
Confidence 899999999999999999999999876511 2577778888877 776 8999999988788899999997 9999
Q ss_pred EEccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-
Q 025264 170 IVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL- 247 (255)
Q Consensus 170 ~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~- 247 (255)
.+|.... ..+++...++. +.++.|++... ..+++++++++++|++++.+.+. +|||+++++||+.+.+++..
T Consensus 270 ~~G~~~~--~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~ 343 (349)
T TIGR03201 270 VVGYTMA--KTEYRLSNLMAFHARALGNWGCP---PDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKR 343 (349)
T ss_pred EECcCCC--CcccCHHHHhhcccEEEEEecCC---HHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccc
Confidence 9998643 23444455544 77888876432 35799999999999988776664 79999999999999888766
Q ss_pred EEEEec
Q 025264 248 RCVLKM 253 (255)
Q Consensus 248 k~vi~~ 253 (255)
|+++++
T Consensus 344 k~~~~~ 349 (349)
T TIGR03201 344 RAILTP 349 (349)
T ss_pred eEEecC
Confidence 988753
No 21
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=6.8e-33 Score=232.35 Aligned_cols=216 Identities=23% Similarity=0.338 Sum_probs=178.8
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
+|+|+||+++|++.++++|+++++++++++++++.|||+++.....++++++|||.|+|++|++++|+|+.+|+ +|+++
T Consensus 135 ~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~ 213 (360)
T PLN02586 135 YGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVI 213 (360)
T ss_pred CCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEE
Confidence 58999999999999999999999999999999999999988666778899999999999999999999999999 88888
Q ss_pred cCCcchH-HHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 025264 102 DIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 180 (255)
Q Consensus 102 ~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 180 (255)
+.+++++ +.++++|+++++++.+ . +.+++.++ ++|++||++|.+..++..+++++++ |+++.+|.... ..
T Consensus 214 ~~~~~~~~~~~~~~Ga~~vi~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~ 284 (360)
T PLN02586 214 SSSSNKEDEAINRLGADSFLVSTD--P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEK--PL 284 (360)
T ss_pred eCCcchhhhHHHhCCCcEEEcCCC--H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCC--CC
Confidence 7776664 4557899999998764 3 24444444 6999999999876689999999997 99999997532 34
Q ss_pred ccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 181 STRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 181 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
+++...++. +..+.|+..+. ..+++++++++.+|++++. + ++|+|+++++|++.+.+++.. |+|+++
T Consensus 285 ~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 285 ELPIFPLVLGRKLVGGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred ccCHHHHHhCCeEEEEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 455555544 77777766442 2578999999999997653 4 589999999999999888765 999876
No 22
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=4.9e-33 Score=231.81 Aligned_cols=241 Identities=22% Similarity=0.308 Sum_probs=195.1
Q ss_pred CCCCCccccCCcccccccCccceeeEEEEcC-CceEEcC-CCCCcc-cccccccchhhhhhHHHhhcCCCCCCEEEEEcC
Q 025264 3 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VSVAKID-PQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL 79 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~-~~~~~~p-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~ 79 (255)
+.++.+|.+ ||+|+++ |+|+||+++++ ..++++| +.++++ +++++++++.|||+++.+..++++|++|||+|+
T Consensus 85 ~~~v~~~~v-Gd~V~~~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga 160 (338)
T cd08295 85 DSGNPDFKV-GDLVWGF---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAA 160 (338)
T ss_pred ecCCCCCCC-CCEEEec---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 456667888 9999865 68999999999 7999995 678887 788899999999999888899999999999997
Q ss_pred -ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHH
Q 025264 80 -GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAA 157 (255)
Q Consensus 80 -g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~ 157 (255)
|++|++++|+|+.+|+ +|+++++++++.+++++ +|+++++++.+ +.++.+.+++.+++++|++||++|+.. +...
T Consensus 161 ~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~ 237 (338)
T cd08295 161 SGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE-EPDLDAALKRYFPNGIDIYFDNVGGKM-LDAV 237 (338)
T ss_pred ccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC-cccHHHHHHHhCCCCcEEEEECCCHHH-HHHH
Confidence 9999999999999999 99999999999999988 99999998653 147778888776558999999999865 9999
Q ss_pred HHHhccCCceEEEEccCCCCCcc----ccCchhhc-cCcEEEEeeeCCCCc--cCcHHHHHHHHHcCCCCCCCcceeeee
Q 025264 158 LECCHKGWGTSVIVGVAASGQEI----STRPFQLV-TGRVWKGTAFGGFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMT 230 (255)
Q Consensus 158 ~~~l~~~~G~~v~~g~~~~~~~~----~~~~~~~~-~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
+++++++ |+++.+|........ ..+...+. ++.++.++....+.. .+.++++++++.+|++++. +...|+
T Consensus 238 ~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~ 314 (338)
T cd08295 238 LLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADG 314 (338)
T ss_pred HHHhccC-cEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccC
Confidence 9999997 999999875321110 11223333 377888765543321 2346788999999997654 445799
Q ss_pred cchHHHHHHHhhCCCee-EEEEec
Q 025264 231 LGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 231 ~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
++++++|++.+.+++.. |+|+++
T Consensus 315 l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 315 LESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHHhcCCCCceEEEEC
Confidence 99999999999887766 999864
No 23
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.8e-32 Score=230.35 Aligned_cols=226 Identities=27% Similarity=0.414 Sum_probs=189.1
Q ss_pred ccceeeEEEEcCC-ceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEE
Q 025264 22 TSTFSQYTVVHDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 100 (255)
Q Consensus 22 ~g~~ae~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~ 100 (255)
.|+|+||+.++++ +++++|++++.++++++++++.|||+++......+++++|||+|+|++|++++|+|+.+|+++|++
T Consensus 128 ~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~ 207 (361)
T cd08231 128 SGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIV 207 (361)
T ss_pred CcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Confidence 4899999999996 799999999999999998999999999877777779999999998999999999999999878999
Q ss_pred EcCCcchHHHHHhcCCcEEeCCCCCCch---HHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCC
Q 025264 101 IDIDPKKFDRAKNFGVTEFVNPKDHDKP---IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 176 (255)
Q Consensus 101 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~---~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 176 (255)
+++++++.++++++|++.++++++ .+ +.+.+.+.+++ ++|++|||+|+...+...+++++++ |+++.+|....
T Consensus 208 ~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 284 (361)
T cd08231 208 IDGSPERLELAREFGADATIDIDE--LPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAP 284 (361)
T ss_pred EcCCHHHHHHHHHcCCCeEEcCcc--cccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCC
Confidence 999999999999999998888765 33 33567788877 8999999999866689999999997 99999997643
Q ss_pred CCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcC--CCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEec
Q 025264 177 GQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKK--EIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 253 (255)
Q Consensus 177 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 253 (255)
....+++...++. +.++.++.... .++++++++++.++ .+.+.+.+.++|+++++++|++.+.++..+|++|++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 285 AGTVPLDPERIVRKNLTIIGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred CCccccCHHHHhhcccEEEEcccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 2333444443344 88888876432 35789999999888 556677778899999999999999887767999864
No 24
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2e-32 Score=229.29 Aligned_cols=239 Identities=25% Similarity=0.415 Sum_probs=202.6
Q ss_pred CCCCCccccCCcccccc---------------------------c-CccceeeEEEEcCCceEEcCCCCCcccccccccc
Q 025264 3 NDRKSRFSINGKPIYHF---------------------------M-GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 54 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~---------------------------~-~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~ 54 (255)
|.++.++++ ||+|+.. . .+|+|+||+.++...++++|+++++++++.+ .+
T Consensus 80 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~ 157 (351)
T cd08233 80 GSGVTGFKV-GDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EP 157 (351)
T ss_pred CCCCCCCCC-CCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-cH
Confidence 556777888 8888742 1 1599999999999999999999999998776 57
Q ss_pred hhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHH
Q 025264 55 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 134 (255)
Q Consensus 55 ~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~ 134 (255)
+.|||+++ ...+++++++|+|+|+|++|++++|+++.+|+++|+++++++++.+.++++|++.++++++ .++.+.++
T Consensus 158 ~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~--~~~~~~l~ 234 (351)
T cd08233 158 LAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVR 234 (351)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCc--cCHHHHHH
Confidence 88999987 7889999999999999999999999999999867889998999999999999999999887 88989998
Q ss_pred hhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHH
Q 025264 135 DLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVD 212 (255)
Q Consensus 135 ~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~ 212 (255)
+.+++ ++|+++|++|.+..++..+++++++ |+++.+|... ...+++...+.. +.++.++.... .++++++++
T Consensus 235 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~ 308 (351)
T cd08233 235 KLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEKTLTGSICYT---REDFEEVID 308 (351)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCcEEEEEeccC---cchHHHHHH
Confidence 88877 7999999999766689999999997 9999999864 234555554444 88998886432 368999999
Q ss_pred HHHcCCCCCCCcceeeeecchH-HHHHHHhhCCCe--eEEEEe
Q 025264 213 KYMKKEIKVDEYVTHNMTLGEI-NEAFRYMHGGDC--LRCVLK 252 (255)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~--~k~vi~ 252 (255)
+++++++++.+.+.++|+++++ ++|++.+.+++. +|+||.
T Consensus 309 ~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 309 LLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred HHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 9999998877778889999996 799998877764 599873
No 25
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=3.4e-33 Score=229.65 Aligned_cols=232 Identities=24% Similarity=0.368 Sum_probs=185.2
Q ss_pred CcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhc------CCCCCCEEEEEcC-ChHHHH
Q 025264 13 GKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA------KVEPGSIVAVFGL-GTVGLA 85 (255)
Q Consensus 13 g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~~~~vlI~G~-g~vG~~ 85 (255)
|+.+..+...|+|+||+++|...++++|++++++++|++|.++.|||.++.... ++++|++|||+|+ |++|++
T Consensus 94 g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~ 173 (347)
T KOG1198|consen 94 GDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTA 173 (347)
T ss_pred eeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHH
Confidence 666666667799999999999999999999999999999999999999999999 9999999999987 899999
Q ss_pred HHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCC
Q 025264 86 VAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGW 165 (255)
Q Consensus 86 a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~ 165 (255)
++|+|++.|+ ..++++.++++.++++++|+++++|+++ +++.+.+.+.++++||+||||+|++. ......++..+
T Consensus 174 aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~- 248 (347)
T KOG1198|consen 174 AIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG- 248 (347)
T ss_pred HHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-
Confidence 9999999996 5666666899999999999999999998 99999999998449999999999987 78888888885
Q ss_pred ceEEEEccCCCCCccccCch-------------hhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecc
Q 025264 166 GTSVIVGVAASGQEISTRPF-------------QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLG 232 (255)
Q Consensus 166 G~~v~~g~~~~~~~~~~~~~-------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (255)
|+...++.... ...+.... ...++..+.... .....+.++.+.+++++++ +++.+.++||++
T Consensus 249 g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~ie~gk--ikp~i~~~~p~~ 323 (347)
T KOG1198|consen 249 GGGAYIGLVGD-ELANYKLDDLWQSANGIKLYSLGLKGVNYRWLY--FVPSAEYLKALVELIEKGK--IKPVIDSVYPFS 323 (347)
T ss_pred CceEEEEeccc-cccccccccchhhhhhhhheeeeeeccceeeee--ecCCHHHHHHHHHHHHcCc--ccCCcceeeeHH
Confidence 75445544321 11111111 000111111111 1123467889999999996 566688999999
Q ss_pred hHHHHHHHhhCCCee-EEEEecC
Q 025264 233 EINEAFRYMHGGDCL-RCVLKMQ 254 (255)
Q Consensus 233 ~~~~a~~~~~~~~~~-k~vi~~~ 254 (255)
++.+|++.+.++... |+++.+.
T Consensus 324 ~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 324 QAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred HHHHHHHHHhhcCCcceEEEEec
Confidence 999999999887665 9999875
No 26
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.8e-32 Score=230.57 Aligned_cols=216 Identities=22% Similarity=0.308 Sum_probs=179.4
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 100 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~-~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~ 100 (255)
+|+|+||+++|++.++++|++++++++++++++..|||+++..... .+++++|+|.|+|++|++++|+|+.+|+ +|++
T Consensus 129 ~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~ 207 (375)
T PLN02178 129 QGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTV 207 (375)
T ss_pred CCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEE
Confidence 5899999999999999999999999999999999999998754433 4689999999999999999999999999 8999
Q ss_pred EcCCcch-HHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCc
Q 025264 101 IDIDPKK-FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 179 (255)
Q Consensus 101 ~~~~~~~-~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 179 (255)
+++++++ .+.++++|+++++++.+ . +.+.+.++ ++|++|||+|.+..+..++++++++ |+++.+|... ..
T Consensus 208 ~~~~~~~~~~~a~~lGa~~~i~~~~--~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~--~~ 278 (375)
T PLN02178 208 ISRSSEKEREAIDRLGADSFLVTTD--S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE--KP 278 (375)
T ss_pred EeCChHHhHHHHHhCCCcEEEcCcC--H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCC--CC
Confidence 8877554 67788999999998764 3 34555544 6999999999986689999999997 9999999753 23
Q ss_pred cccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 180 ISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 180 ~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
.+++...++. +.++.|+..+.. +++.++++++.+|++++. + ++|||+++++|++.+.+++.. |+|+.+
T Consensus 279 ~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 279 LDLPIFPLVLGRKMVGGSQIGGM---KETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred CccCHHHHHhCCeEEEEeCccCH---HHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 4455555544 888988865432 578999999999997654 4 679999999999999888765 999876
No 27
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=4e-32 Score=225.90 Aligned_cols=245 Identities=25% Similarity=0.345 Sum_probs=198.7
Q ss_pred CCCCCCccccCCcccccc-------c-----CccceeeEEEEcCCceEE-cCCCCCcccccccccchhhhhhHHHhhcCC
Q 025264 2 MNDRKSRFSINGKPIYHF-------M-----GTSTFSQYTVVHDVSVAK-IDPQAPLDKVCLLGCGVPTGLGAVWNTAKV 68 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~-------~-----~~g~~ae~~~v~~~~~~~-~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~ 68 (255)
..|+.|.+|..|....+- . .+|+++||+++|.+++++ +|++++ .+++++..++++++++.......
T Consensus 88 ~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~-~~~aal~epla~~~~~~a~~~~~ 166 (350)
T COG1063 88 IPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGID-EEAAALTEPLATAYHGHAERAAV 166 (350)
T ss_pred cCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCC-hhhhhhcChhhhhhhhhhhccCC
Confidence 468889999988865533 1 258999999999866655 588884 55555555999998874455556
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEe
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 146 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d 146 (255)
+++.+|+|+|+|++|++++++++..|+.+|++++.+++|++++++ .|++.+++..+ ++..+.+.+.++| ++|++||
T Consensus 167 ~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~--~~~~~~~~~~t~g~g~D~vie 244 (350)
T COG1063 167 RPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE--DDAGAEILELTGGRGADVVIE 244 (350)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc--ccHHHHHHHHhCCCCCCEEEE
Confidence 666699999999999999999999999899999999999999988 66777777665 4677788889988 9999999
Q ss_pred cCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcc
Q 025264 147 CIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYV 225 (255)
Q Consensus 147 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (255)
|+|.+.+++.+++.++++ |+++.+|....... .++...++. ++++.|+... ....+++.+++++.+|++++..++
T Consensus 245 ~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~--~~~~~~~~~~~ll~~g~i~~~~li 320 (350)
T COG1063 245 AVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRP--SGREDFERALDLLASGKIDPEKLI 320 (350)
T ss_pred CCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCC--CCcccHHHHHHHHHcCCCChhHce
Confidence 999988899999999997 99999999754322 454555554 9999998421 123579999999999999999999
Q ss_pred eeeeecchHHHHHHHhhCCC--eeEEEEec
Q 025264 226 THNMTLGEINEAFRYMHGGD--CLRCVLKM 253 (255)
Q Consensus 226 ~~~~~~~~~~~a~~~~~~~~--~~k~vi~~ 253 (255)
++.++++++++|++.+.+.+ .+|+++.+
T Consensus 321 t~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 321 THRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred EeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 89999999999999987654 45999864
No 28
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=6.6e-32 Score=227.11 Aligned_cols=228 Identities=55% Similarity=0.952 Sum_probs=195.1
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
.|+|+||++++++.++++|+++++++++.+++++.+||+++.+...++++++|||+|+|++|++++++++.+|+..|+++
T Consensus 135 ~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~ 214 (365)
T cd05279 135 TSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAV 214 (365)
T ss_pred cccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 47899999999999999999999999999999999999998888999999999999889999999999999999447788
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCc--hHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhc-cCCceEEEEccCCCCC
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDK--PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH-KGWGTSVIVGVAASGQ 178 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~--~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~~ 178 (255)
++++++.+.++++|+++++++++ . ++.+.+++.+++++|+++|++|....+..++++++ ++ |+++.+|......
T Consensus 215 ~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~ 291 (365)
T cd05279 215 DINKDKFEKAKQLGATECINPRD--QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGT 291 (365)
T ss_pred eCCHHHHHHHHHhCCCeeccccc--ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCC
Confidence 88999999999999999998876 5 77788888775589999999997666899999999 96 9999998754233
Q ss_pred ccccCchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEe
Q 025264 179 EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 252 (255)
Q Consensus 179 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 252 (255)
...++...+.++.++.|++...+...+.+.+++++++++.+++.+.+.++|+++++++|++.+.+++..|++++
T Consensus 292 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 292 EATLDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred ceeeCHHHHhcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 45555555545788888877666666788999999999998766567789999999999999888777788763
No 29
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.3e-32 Score=223.29 Aligned_cols=204 Identities=26% Similarity=0.388 Sum_probs=171.0
Q ss_pred ccceeeEEEEcCC-ceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEE
Q 025264 22 TSTFSQYTVVHDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 100 (255)
Q Consensus 22 ~g~~ae~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~ 100 (255)
+|+|+||+++|+. +++++|+++++++++.+++++.|||+++ +.....++++|||+|+|++|++++|+|+.+|+.+|++
T Consensus 72 ~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~ 150 (280)
T TIGR03366 72 SGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVA 150 (280)
T ss_pred cccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEE
Confidence 5999999999997 6999999999999999999999999987 4556679999999999999999999999999944899
Q ss_pred EcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCc
Q 025264 101 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 179 (255)
Q Consensus 101 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 179 (255)
+++++++.++++++|++.++++.+ ..+.+++.+++ ++|++||++|.+..++.++++++++ |+++.+|.......
T Consensus 151 ~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~ 225 (280)
T TIGR03366 151 ADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSVFPGGP 225 (280)
T ss_pred ECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccCCCCCc
Confidence 998999999999999998888653 24566667766 8999999999887799999999997 99999997543334
Q ss_pred cccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHc--CCCCCCCcceeeeecchH
Q 025264 180 ISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMK--KEIKVDEYVTHNMTLGEI 234 (255)
Q Consensus 180 ~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 234 (255)
.+++...+.. ++++.|+... ..++++++++++.+ ++++++++++++||++++
T Consensus 226 ~~i~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 226 VALDPEQVVRRWLTIRGVHNY---EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred eeeCHHHHHhCCcEEEecCCC---CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 4566666655 9999987643 23579999999997 466677888999999873
No 30
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=4.5e-32 Score=224.86 Aligned_cols=209 Identities=20% Similarity=0.244 Sum_probs=176.2
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
+|+|+||+.+++++++++|+++++++++.+++++.|||+++ ...++++|++|||+|+|++|++++|+|+..|+ +|+++
T Consensus 118 ~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~ 195 (329)
T TIGR02822 118 DGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVM 195 (329)
T ss_pred CCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEE
Confidence 58999999999999999999999999999999999999987 56889999999999999999999999999999 89999
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccc
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 181 (255)
+++++++++++++|+++++++.+ .. .+++|+++++.+....+..++++++++ |+++.+|..... ..+
T Consensus 196 ~~~~~~~~~a~~~Ga~~vi~~~~--~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~ 262 (329)
T TIGR02822 196 TRGAAARRLALALGAASAGGAYD--TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPP 262 (329)
T ss_pred eCChHHHHHHHHhCCceeccccc--cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCC
Confidence 99999999999999999987543 11 126899998888777799999999997 999999975322 223
Q ss_pred cCchhhc-cCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEE
Q 025264 182 TRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 182 ~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 251 (255)
++...++ +++++.++.... +.++.++++++.++++++ ++++|+|+++++|++.+.+++.. |+||
T Consensus 263 ~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~---i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 263 LNYQRHLFYERQIRSVTSNT---RADAREFLELAAQHGVRV---TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred CCHHHHhhCCcEEEEeecCC---HHHHHHHHHHHHhCCCee---EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 4444443 488888876432 256888999999999753 56899999999999999888776 9887
No 31
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=3.9e-32 Score=225.14 Aligned_cols=239 Identities=18% Similarity=0.209 Sum_probs=193.9
Q ss_pred CCCCCc-cccCCcccccccC-ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEE-c-
Q 025264 3 NDRKSR-FSINGKPIYHFMG-TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-G- 78 (255)
Q Consensus 3 g~~~~~-~~~~g~~v~~~~~-~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~-G- 78 (255)
|+++.+ |++ ||+|+++.. +|+|+||+.++++.++++|+++++++++++++.+.|||. +...... +++.++|+ |
T Consensus 76 G~~v~~~~~v-Gd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g 152 (324)
T cd08291 76 GGGPLAQSLI-GKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAA 152 (324)
T ss_pred CCCccccCCC-CCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccC
Confidence 566665 888 999987654 399999999999999999999999999988888999975 4455555 45566665 5
Q ss_pred CChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHH
Q 025264 79 LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAA 157 (255)
Q Consensus 79 ~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~ 157 (255)
+|++|++++|+|+.+|+ +|+++++++++.+.++++|+++++++++ .++.+.+++.+++ ++|++||++|+.. ....
T Consensus 153 ~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~ 228 (324)
T cd08291 153 ASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD--PDFLEDLKELIAKLNATIFFDAVGGGL-TGQI 228 (324)
T ss_pred ccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC--ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHH
Confidence 49999999999999999 9999999999999999999999999887 8898999988887 8999999999987 7888
Q ss_pred HHHhccCCceEEEEccCCCCCccccCchhhc-cCcEEEEeeeCCCCc---cCcHHHHHHHHHcCCCCCCCcceeeeecch
Q 025264 158 LECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGE 233 (255)
Q Consensus 158 ~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (255)
+++++++ |+++.+|.........++...++ ++.++.++....+.. .+.+++++++++ +. +++.+.++|+|++
T Consensus 229 ~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~i~~~~~l~~ 304 (324)
T cd08291 229 LLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TE--LKTTFASRYPLAL 304 (324)
T ss_pred HHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cc--cccceeeEEcHHH
Confidence 9999996 99999987543222124334433 488999887655432 245777888887 66 4556888999999
Q ss_pred HHHHHHHhhCCCee-EEEEe
Q 025264 234 INEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 234 ~~~a~~~~~~~~~~-k~vi~ 252 (255)
+++|++.+.+++.. |++++
T Consensus 305 ~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 305 TLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHHHHhCCCCCeEEeC
Confidence 99999999887655 99874
No 32
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.9e-31 Score=224.72 Aligned_cols=231 Identities=56% Similarity=0.954 Sum_probs=191.4
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
.|+|+||++++.++++++|+++++++++++++++.|||+++.....++++++|+|+|+|++|++++++++..|+.+|+++
T Consensus 142 ~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~ 221 (373)
T cd08299 142 TSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAV 221 (373)
T ss_pred CCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 58999999999999999999999999999999999999998888999999999999889999999999999998679999
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHh-ccCCceEEEEccCCCCCcc
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC-HKGWGTSVIVGVAASGQEI 180 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~~~~ 180 (255)
++++++++.++++|++++++..+...++.+.+.+.+++++|+++||+|.+..+...+..+ +.+ |+++.+|........
T Consensus 222 ~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~ 300 (373)
T cd08299 222 DINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNL 300 (373)
T ss_pred cCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCcee
Confidence 999999999999999999987651133667777766568999999999766577767765 565 999999976432234
Q ss_pred ccCchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEec
Q 025264 181 STRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 253 (255)
Q Consensus 181 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 253 (255)
+++...+.++.++.++..+.+.....+.++++.+.++.+++.+.+.++|+++++++|++.+.+++..|+++++
T Consensus 301 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 301 SINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred ecCHHHHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 4444334457888888877665445677888888888777777778899999999999998877767888763
No 33
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.7e-31 Score=224.62 Aligned_cols=227 Identities=35% Similarity=0.624 Sum_probs=192.2
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
.|+|+||++++++.++++|+++++++++.+++++.||+.++.....++++++|||+|+|++|++++|+++..|+..++++
T Consensus 138 ~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~ 217 (365)
T cd08278 138 QSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAV 217 (365)
T ss_pred ccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 48999999999999999999999999999999999999998888899999999999889999999999999999568889
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccc
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 181 (255)
++++++.+.++++|++.++++++ .++.+.+.+.+++++|+++||+|.+..+..++++++++ |+++.+|.........
T Consensus 218 ~~~~~k~~~~~~~g~~~~i~~~~--~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 294 (365)
T cd08278 218 DIVDSRLELAKELGATHVINPKE--EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVT 294 (365)
T ss_pred eCCHHHHHHHHHcCCcEEecCCC--cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccc
Confidence 89999999999999999999886 77888888877339999999999766689999999997 9999999753323345
Q ss_pred cCchhh-ccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEe
Q 025264 182 TRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 252 (255)
Q Consensus 182 ~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 252 (255)
++...+ .++.++.++........+.+.+++++++++++.+.+.+ .+|+++++++|++.+.++...|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 295 LDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred cCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 565555 44888888765443334567889999999987543333 58999999999999988877799875
No 34
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.4e-31 Score=224.88 Aligned_cols=226 Identities=23% Similarity=0.326 Sum_probs=175.1
Q ss_pred ccceeeEEEEcCC--ceEEcCCCCCc----ccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC
Q 025264 22 TSTFSQYTVVHDV--SVAKIDPQAPL----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA 95 (255)
Q Consensus 22 ~g~~ae~~~v~~~--~~~~~p~~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~ 95 (255)
+|+|+||+++|+. .++++|++++. ++++++..++.+||+++ ...+++++++|||.|+|++|++++|+|+.+|+
T Consensus 132 ~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga 210 (393)
T TIGR02819 132 VGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGA 210 (393)
T ss_pred CCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 4899999999964 69999997653 34677777899999987 56889999999998889999999999999999
Q ss_pred CeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcH--------------HHHHHHHHH
Q 025264 96 SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV--------------SVMRAALEC 160 (255)
Q Consensus 96 ~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~--------------~~~~~~~~~ 160 (255)
+.++++++++++.++++++|++.+.+..+ .++.+.+.+.+++ ++|++||++|.+ ..++.++++
T Consensus 211 ~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~--~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (393)
T TIGR02819 211 AVVIVGDLNPARLAQARSFGCETVDLSKD--ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEV 288 (393)
T ss_pred ceEEEeCCCHHHHHHHHHcCCeEEecCCc--ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHH
Confidence 44555677888999999999975443343 5677788888877 899999999985 359999999
Q ss_pred hccCCceEEEEccCCCCCccc-----------cCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcce-e
Q 025264 161 CHKGWGTSVIVGVAASGQEIS-----------TRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVT-H 227 (255)
Q Consensus 161 l~~~~G~~v~~g~~~~~~~~~-----------~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 227 (255)
++++ |+++.+|......... +....... +.++.+.. ....+.+.++++++.+|++++.++++ +
T Consensus 289 ~~~~-G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~ 364 (393)
T TIGR02819 289 TRVG-GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVT 364 (393)
T ss_pred hhCC-CEEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecc
Confidence 9997 9999999863221111 11112222 44554421 11113347899999999998877776 6
Q ss_pred eeecchHHHHHHHhhCCCeeEEEEecC
Q 025264 228 NMTLGEINEAFRYMHGGDCLRCVLKMQ 254 (255)
Q Consensus 228 ~~~~~~~~~a~~~~~~~~~~k~vi~~~ 254 (255)
+|||+++++||+.+.+++.+|++|.++
T Consensus 365 ~~~l~~~~~a~~~~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 365 VISLDDAPEGYAEFDAGAAKKFVIDPH 391 (393)
T ss_pred eecHHHHHHHHHHHhhCCceEEEEeCC
Confidence 899999999999998877779999874
No 35
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.3e-31 Score=222.13 Aligned_cols=235 Identities=18% Similarity=0.226 Sum_probs=190.2
Q ss_pred CccccCCcccccccCccceeeEEEEcCCceEEc----CCCCCcccc-cccccchhhhhhHHHhhcCCCCCCEEEEEcC-C
Q 025264 7 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI----DPQAPLDKV-CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-G 80 (255)
Q Consensus 7 ~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~----p~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 80 (255)
.+|.+ ||+|+++ ++|++|+.++.+++.++ |++++++++ +++++++.|||+++.+..++++|++|||+|+ |
T Consensus 74 ~~~~~-GdrV~~~---~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g 149 (325)
T TIGR02825 74 VALPK-GTIVLAS---PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAG 149 (325)
T ss_pred CCCCC-CCEEEEe---cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCcc
Confidence 45777 9999875 47999999999988887 889999987 6788899999999888899999999999996 9
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCc-hHHHHHHhhcCCCccEEEecCCcHHHHHHHHH
Q 025264 81 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK-PIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 159 (255)
Q Consensus 81 ~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~ 159 (255)
++|++++|+|+..|+ +|+++++++++.++++++|++.++++++ . .+.+.++..+++++|++||++|++. ++..++
T Consensus 150 ~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~~~~~~~~~~gvdvv~d~~G~~~-~~~~~~ 225 (325)
T TIGR02825 150 AVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLEETLKKASPDGYDCYFDNVGGEF-SNTVIG 225 (325)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHHHHHHHhCCCCeEEEEECCCHHH-HHHHHH
Confidence 999999999999999 9999999999999999999999999875 4 4656666665448999999999887 899999
Q ss_pred HhccCCceEEEEccCCCCC---cccc--Cchh-hccCcEEEEeeeCCCCc---cCcHHHHHHHHHcCCCCCCCcceeeee
Q 025264 160 CCHKGWGTSVIVGVAASGQ---EIST--RPFQ-LVTGRVWKGTAFGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMT 230 (255)
Q Consensus 160 ~l~~~~G~~v~~g~~~~~~---~~~~--~~~~-~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
+++++ |+++.+|...... ..+. .... +++++++.++....+.. .+.++++++++++|++++. +..+|+
T Consensus 226 ~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~ 302 (325)
T TIGR02825 226 QMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEG 302 (325)
T ss_pred HhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eecccc
Confidence 99997 9999998753211 1111 1122 33477887776533221 2357889999999997765 446799
Q ss_pred cchHHHHHHHhhCCCee-EEEEe
Q 025264 231 LGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 231 ~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
++++++|++.+.+++.. |+|++
T Consensus 303 l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 303 FENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHHHHhcCCCCCeEEeC
Confidence 99999999999888766 98874
No 36
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.4e-31 Score=221.98 Aligned_cols=217 Identities=20% Similarity=0.290 Sum_probs=180.1
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
+|+|+||++++...++++|+++++++++++++++.|||+++......+++++|+|+|+|++|++++|+|+.+|+ +|+++
T Consensus 132 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~ 210 (357)
T PLN02514 132 QGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVI 210 (357)
T ss_pred CCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEE
Confidence 58999999999999999999999999999999999999988666667899999999889999999999999999 89988
Q ss_pred cCCcchHHHH-HhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 025264 102 DIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 180 (255)
Q Consensus 102 ~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 180 (255)
++++++++.+ +++|++.++++.+ . +.+.+.+. ++|++|||+|.+..++..+++++++ |+++.+|.... ..
T Consensus 211 ~~~~~~~~~~~~~~Ga~~~i~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~ 281 (357)
T PLN02514 211 SSSDKKREEALEHLGADDYLVSSD--A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT--PL 281 (357)
T ss_pred eCCHHHHHHHHHhcCCcEEecCCC--h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC--CC
Confidence 8887777665 6799988877653 2 23444443 6999999999776689999999997 99999998642 33
Q ss_pred ccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEecC
Q 025264 181 STRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 254 (255)
Q Consensus 181 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~~ 254 (255)
+++...++. +.++.|+..+.. .++.++++++.+|.++ +.+ ++||++++++||+.+.+++.. |+++.++
T Consensus 282 ~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 282 QFVTPMLMLGRKVITGSFIGSM---KETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred cccHHHHhhCCcEEEEEecCCH---HHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 455554544 889999876533 5789999999999854 445 589999999999999888776 9999875
No 37
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=1.6e-31 Score=207.52 Aligned_cols=241 Identities=22% Similarity=0.263 Sum_probs=199.7
Q ss_pred CCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcc--cccccccchhhhhhHHHhhcCCCCCCEEEEEcC-C
Q 025264 4 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD--KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-G 80 (255)
Q Consensus 4 ~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~--~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 80 (255)
+....|++ ||.|.+. .+|+||..++.+.+.|++++.-.- ....+.++..|||.+|.+.+++++|++|+|.|| |
T Consensus 86 S~~~~f~~-GD~V~~~---~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaG 161 (340)
T COG2130 86 SNHPGFQP-GDIVVGV---SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAG 161 (340)
T ss_pred cCCCCCCC-CCEEEec---ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEeccc
Confidence 45678999 9988865 479999999999999997542211 234466689999999999999999999999987 9
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHH
Q 025264 81 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 159 (255)
Q Consensus 81 ~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~ 159 (255)
++|..+.|+||..|+ +|++++.+++|.+++++ +|.+..|||+. +++.+.+.+..+.++|+.||++|++. ++..+.
T Consensus 162 aVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a~P~GIDvyfeNVGg~v-~DAv~~ 237 (340)
T COG2130 162 AVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEACPKGIDVYFENVGGEV-LDAVLP 237 (340)
T ss_pred ccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHHCCCCeEEEEEcCCchH-HHHHHH
Confidence 999999999999999 99999999999999977 99999999999 99999999999889999999999999 999999
Q ss_pred HhccCCceEEEEccCCC--CCccccC---chhhcc-CcEEEEeeeCC-CCc--cCcHHHHHHHHHcCCCCCCCcceeeee
Q 025264 160 CCHKGWGTSVIVGVAAS--GQEISTR---PFQLVT-GRVWKGTAFGG-FKS--RSQVPWLVDKYMKKEIKVDEYVTHNMT 230 (255)
Q Consensus 160 ~l~~~~G~~v~~g~~~~--~~~~~~~---~~~~~~-~~~~~g~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
.|+.. +|++.||..+. ....+.. ...++. .+++.|+...+ +.. .+..+++..++.+|+++.++.+ +=.
T Consensus 238 ~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti--~dG 314 (340)
T COG2130 238 LLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETI--VDG 314 (340)
T ss_pred hhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeee--hhh
Confidence 99995 99999997541 1111111 222344 89999998733 321 2456788889999999887654 346
Q ss_pred cchHHHHHHHhhCCCee-EEEEecCC
Q 025264 231 LGEINEAFRYMHGGDCL-RCVLKMQD 255 (255)
Q Consensus 231 ~~~~~~a~~~~~~~~~~-k~vi~~~~ 255 (255)
|+++++||..|.+++.+ |.|+++.+
T Consensus 315 lEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 315 LENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhccHHHHHHHhcCCccceEEEEecC
Confidence 99999999999999887 99998764
No 38
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=7.9e-31 Score=219.15 Aligned_cols=243 Identities=21% Similarity=0.309 Sum_probs=188.6
Q ss_pred CCCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCccc----ccccccchhhhhhHHHhhcCCCCC--CEEE
Q 025264 2 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK----VCLLGCGVPTGLGAVWNTAKVEPG--SIVA 75 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~~--~~vl 75 (255)
+|.++.+|++ ||+|+++. ++|+||++++++.++++|+++++++ +++++.++.|||+++.+..+++++ ++||
T Consensus 83 vG~~v~~~~~-Gd~V~~~~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~Vl 159 (345)
T cd08293 83 EESKHQKFAV-GDIVTSFN--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMV 159 (345)
T ss_pred eccCCCCCCC-CCEEEecC--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEE
Confidence 4678888999 99998753 6899999999999999999865443 456777899999998888888877 9999
Q ss_pred EEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHH
Q 025264 76 VFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 153 (255)
Q Consensus 76 I~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~ 153 (255)
|+|+ |++|++++|+|+.+|+.+|+++++++++.+.+++ +|+++++++++ .++.+.+++.+++++|++||++|+..
T Consensus 160 I~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~~~~gvd~vid~~g~~~- 236 (345)
T cd08293 160 VSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLRELCPEGVDVYFDNVGGEI- 236 (345)
T ss_pred EECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHHHCCCCceEEEECCCcHH-
Confidence 9997 9999999999999998569999999999999876 99999999887 78888888877668999999999987
Q ss_pred HHHHHHHhccCCceEEEEccCCCC-Cccc----cC--chhhcc--CcEEEEeeeCCCC--ccCcHHHHHHHHHcCCCCCC
Q 025264 154 MRAALECCHKGWGTSVIVGVAASG-QEIS----TR--PFQLVT--GRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVD 222 (255)
Q Consensus 154 ~~~~~~~l~~~~G~~v~~g~~~~~-~~~~----~~--~~~~~~--~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 222 (255)
+..++++++++ |+++.+|..... ...+ +. ...+.+ +.++..+...... ..+.+++++++++++.+++.
T Consensus 237 ~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~ 315 (345)
T cd08293 237 SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK 315 (345)
T ss_pred HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce
Confidence 89999999997 999999853211 1011 11 011122 3333333222211 12346678889999997654
Q ss_pred CcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 223 EYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 223 ~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
...+++++++++|++.+.+++.. |+|+++
T Consensus 316 --~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 316 --ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred --eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 34467999999999999888766 999874
No 39
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.7e-30 Score=217.66 Aligned_cols=226 Identities=24% Similarity=0.385 Sum_probs=185.1
Q ss_pred ccceeeEEEEcCC--ceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEE
Q 025264 22 TSTFSQYTVVHDV--SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVI 99 (255)
Q Consensus 22 ~g~~ae~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~ 99 (255)
.|+|+||+.++.. .++++|++++++++++++.++.||++++ ....++++++|||+|+|++|++++|+++.+|+..|+
T Consensus 117 ~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~ 195 (351)
T cd08285 117 DGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRII 195 (351)
T ss_pred CcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEE
Confidence 5899999999974 8999999999999999998999999985 778999999999998899999999999999995588
Q ss_pred EEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCC
Q 025264 100 GIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 178 (255)
Q Consensus 100 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 178 (255)
++++++++.+.++++|++.++++.+ .++.+.+.+.+.+ ++|+++||+|++..+...+++++++ |+++.+|......
T Consensus 196 ~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~ 272 (351)
T cd08285 196 AVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDD 272 (351)
T ss_pred EEeCCHHHHHHHHHcCCceEecCCC--CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCc
Confidence 8888889999999999999999887 7888888887776 8999999999876689999999997 9999998765322
Q ss_pred ccccCchhh---ccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCC-cceeeeecchHHHHHHHhhCCC--eeEEEEe
Q 025264 179 EISTRPFQL---VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDE-YVTHNMTLGEINEAFRYMHGGD--CLRCVLK 252 (255)
Q Consensus 179 ~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~--~~k~vi~ 252 (255)
..+++...+ ....++.+..... ..++++++++++++|++.+.. .+.++|+++++++|++.+.+++ .+|++|+
T Consensus 273 ~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 350 (351)
T cd08285 273 YLPIPREEWGVGMGHKTINGGLCPG--GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVII 350 (351)
T ss_pred eeecChhhhhhhccccEEEEeecCC--ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEe
Confidence 233332122 2245555443211 236789999999999987743 3345699999999999998775 3599987
Q ss_pred c
Q 025264 253 M 253 (255)
Q Consensus 253 ~ 253 (255)
+
T Consensus 351 ~ 351 (351)
T cd08285 351 F 351 (351)
T ss_pred C
Confidence 4
No 40
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=5.7e-31 Score=218.54 Aligned_cols=237 Identities=20% Similarity=0.243 Sum_probs=191.4
Q ss_pred CCccccCCcccccccCccceeeEEEEcCC---ceEEcCCCCC--c---ccccccccchhhhhhHHHhhcCCCCCCEEEEE
Q 025264 6 KSRFSINGKPIYHFMGTSTFSQYTVVHDV---SVAKIDPQAP--L---DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 77 (255)
Q Consensus 6 ~~~~~~~g~~v~~~~~~g~~ae~~~v~~~---~~~~~p~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~ 77 (255)
+.+|.+ ||+|+++ ++|++|++++.. .++++|++++ + ..+++++++++|||+++.+..++++|++|||+
T Consensus 75 ~~~~~~-Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ 150 (329)
T cd08294 75 NSKFPV-GTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVN 150 (329)
T ss_pred CCCCCC-CCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 346778 9999864 579999999999 9999999988 2 22346788999999998888999999999999
Q ss_pred cC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHH
Q 025264 78 GL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRA 156 (255)
Q Consensus 78 G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~ 156 (255)
|+ |++|++++|+|+..|+ +|+++++++++.++++++|+++++++++ +++.+.+++.+++++|++||++|++. +..
T Consensus 151 ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~--~~~~~~v~~~~~~gvd~vld~~g~~~-~~~ 226 (329)
T cd08294 151 GAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT--VSLEEALKEAAPDGIDCYFDNVGGEF-SST 226 (329)
T ss_pred cCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHCCCCcEEEEECCCHHH-HHH
Confidence 86 9999999999999999 9999999999999999999999999987 88888888777668999999999966 899
Q ss_pred HHHHhccCCceEEEEccCCCCCc--c---ccCchh-hccCcEEEEeeeCCCC--ccCcHHHHHHHHHcCCCCCCCcceee
Q 025264 157 ALECCHKGWGTSVIVGVAASGQE--I---STRPFQ-LVTGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHN 228 (255)
Q Consensus 157 ~~~~l~~~~G~~v~~g~~~~~~~--~---~~~~~~-~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (255)
.+++++++ |+++.+|....... . ...... +++++++.++....+. ..+.+++++++++++.+++. ...+
T Consensus 227 ~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~ 303 (329)
T cd08294 227 VLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVT 303 (329)
T ss_pred HHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccc
Confidence 99999996 99999986422111 0 111222 3347888887654331 12346788899999997664 3357
Q ss_pred eecchHHHHHHHhhCCCee-EEEEec
Q 025264 229 MTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 229 ~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
|+++++++|++.+.+++.. |+|+++
T Consensus 304 ~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 304 EGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred cCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 9999999999999887766 999864
No 41
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=7.1e-31 Score=217.52 Aligned_cols=240 Identities=17% Similarity=0.200 Sum_probs=201.4
Q ss_pred CCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-Ch
Q 025264 3 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GT 81 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 81 (255)
|+++..+++ ||+|+++...|+|++|++++...++++|+++++++++.+++.+.|||+++ ...+++++++|||+|+ |.
T Consensus 74 G~~v~~~~~-Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ 151 (324)
T cd08292 74 GEGVKGLQV-GQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGA 151 (324)
T ss_pred CCCCCCCCC-CCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccH
Confidence 566777888 99999876579999999999999999999999999999998999999986 5689999999999987 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHH
Q 025264 82 VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 160 (255)
Q Consensus 82 vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~ 160 (255)
+|++++|+|+.+|+ +++++++++++.+.++++|+++++++++ .++.+.+.+.+++ ++|++|||+|++. ....+++
T Consensus 152 ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~ 227 (324)
T cd08292 152 VGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQ--PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSL 227 (324)
T ss_pred HHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCC--chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHh
Confidence 99999999999999 9999999999999998899999998887 7888889998888 9999999999976 8899999
Q ss_pred hccCCceEEEEccCCCCCccccCchhh-ccCcEEEEeeeCCCCc-------cCcHHHHHHHHHcCCCCCCCcceeeeecc
Q 025264 161 CHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNMTLG 232 (255)
Q Consensus 161 l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (255)
++++ |+++.+|... ....+++.... .++.++.++....+.. .+.+.++++++.++.+.+. +.++|+++
T Consensus 228 l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~ 303 (324)
T cd08292 228 LGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLG 303 (324)
T ss_pred hcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHH
Confidence 9996 9999998752 22333443333 3488888887643221 2357789999999997653 35789999
Q ss_pred hHHHHHHHhhCCCee-EEEEe
Q 025264 233 EINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 233 ~~~~a~~~~~~~~~~-k~vi~ 252 (255)
++++|++.+.++... |++++
T Consensus 304 ~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 304 DAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHHHHHcCCCCceEEeC
Confidence 999999998876655 88864
No 42
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=9.2e-31 Score=219.46 Aligned_cols=218 Identities=21% Similarity=0.269 Sum_probs=168.6
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHh------hcCCCCCCEEEEEcCChHHHHHHHHHHHcCC
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN------TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA 95 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~------~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~ 95 (255)
+|+|+||+.+++.+++++|++++ +. +++..++.++++++.. ...++++++|+|+|+|++|++++|+|+.+|+
T Consensus 120 ~G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~ 197 (355)
T cd08230 120 HGFMREYFVDDPEYLVKVPPSLA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF 197 (355)
T ss_pred CccceeEEEeccccEEECCCCCC-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 48999999999999999999998 44 4444466666554322 2236789999999999999999999999999
Q ss_pred CeEEEEcC---CcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEc
Q 025264 96 SRVIGIDI---DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 172 (255)
Q Consensus 96 ~~v~~~~~---~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 172 (255)
+|+++++ ++++++.++++|++. +++.+ +++.+ .+ . .+++|+||||+|.+..+...+++++++ |+++.+|
T Consensus 198 -~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~--~~~~~-~~-~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G 269 (355)
T cd08230 198 -EVYVLNRRDPPDPKADIVEELGATY-VNSSK--TPVAE-VK-L-VGEFDLIIEATGVPPLAFEALPALAPN-GVVILFG 269 (355)
T ss_pred -eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc--cchhh-hh-h-cCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEe
Confidence 8999987 678999999999986 56655 44443 22 1 238999999999876689999999997 9999999
Q ss_pred cCCCCCccccC----chhhc-cCcEEEEeeeCCCCccCcHHHHHHHHHcCCC----CCCCcceeeeecchHHHHHHHhhC
Q 025264 173 VAASGQEISTR----PFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEI----KVDEYVTHNMTLGEINEAFRYMHG 243 (255)
Q Consensus 173 ~~~~~~~~~~~----~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~a~~~~~~ 243 (255)
........+++ ...++ ++.++.|+.... .++++++++++.++.+ .+.+.++++|+++++++|++.+.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~ 346 (355)
T cd08230 270 VPGGGREFEVDGGELNRDLVLGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPD 346 (355)
T ss_pred cCCCCCccccChhhhhhhHhhcCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhccc
Confidence 86542333444 23333 489999876433 3578999999988762 256678899999999999998865
Q ss_pred CCeeEEEEec
Q 025264 244 GDCLRCVLKM 253 (255)
Q Consensus 244 ~~~~k~vi~~ 253 (255)
+. .|++|++
T Consensus 347 ~~-~K~v~~~ 355 (355)
T cd08230 347 GE-IKVVIEW 355 (355)
T ss_pred CC-eEEEeeC
Confidence 43 5999875
No 43
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.98 E-value=3e-30 Score=219.96 Aligned_cols=246 Identities=17% Similarity=0.214 Sum_probs=191.4
Q ss_pred CCCCCC-ccccCCccccccc----------------CccceeeEEEEcCC----ceEEcCCCCCcccccccccch---hh
Q 025264 2 MNDRKS-RFSINGKPIYHFM----------------GTSTFSQYTVVHDV----SVAKIDPQAPLDKVCLLGCGV---PT 57 (255)
Q Consensus 2 ~g~~~~-~~~~~g~~v~~~~----------------~~g~~ae~~~v~~~----~~~~~p~~~~~~~aa~~~~~~---~t 57 (255)
.|+++. +|++ ||+|+... .+|+|+||++++++ .++++|+++++++++++. ++ .+
T Consensus 77 vG~~v~~~~~v-GdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~e-pl~~~~~ 154 (410)
T cd08238 77 VGKKWQGKYKP-GQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVE-PLSCVIG 154 (410)
T ss_pred eCCCccCCCCC-CCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcc-hHHHHHH
Confidence 366776 5888 99997531 25999999999987 689999999999988653 22 12
Q ss_pred hhhHH--------HhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCCcchHHHHHhc--------CCc-
Q 025264 58 GLGAV--------WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKKFDRAKNF--------GVT- 117 (255)
Q Consensus 58 a~~~l--------~~~~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g--~~~v~~~~~~~~~~~~~~~~--------g~~- 117 (255)
++.++ .+..+++++++|+|+|+ |++|++++|+|+.+| +.+|+++++++++++.++++ |++
T Consensus 155 ~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~ 234 (410)
T cd08238 155 AYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIEL 234 (410)
T ss_pred HhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceE
Confidence 33332 24578899999999985 999999999999975 44799999999999999987 766
Q ss_pred EEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCC-CCccccCchhhcc-CcEEE
Q 025264 118 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS-GQEISTRPFQLVT-GRVWK 194 (255)
Q Consensus 118 ~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~-~~~~~ 194 (255)
.++++.+ ++++.+.+++.+++ ++|+++|++|.+..+..++++++++ |+++.++.... ....+++...+.. +.++.
T Consensus 235 ~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~ 312 (410)
T cd08238 235 LYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNFYNVHYNNTHYV 312 (410)
T ss_pred EEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEEEEEccCCCCccccccHHHhhhcCcEEE
Confidence 5677653 14677888888887 8999999999877799999999996 88777644221 1123455555554 89999
Q ss_pred EeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEecC
Q 025264 195 GTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 254 (255)
Q Consensus 195 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~~ 254 (255)
|+..+. ..+++++++++.+|++++.++++++|||+++++|++.+..+...|+||.++
T Consensus 313 g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~gKvvl~~~ 369 (410)
T cd08238 313 GTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGGKKLIYTQ 369 (410)
T ss_pred EeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCceEEEECC
Confidence 876432 257899999999999988888999999999999999998333449999874
No 44
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.98 E-value=7.1e-30 Score=214.74 Aligned_cols=228 Identities=46% Similarity=0.770 Sum_probs=192.7
Q ss_pred CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEE
Q 025264 21 GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 100 (255)
Q Consensus 21 ~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~ 100 (255)
..|+|+||++++.+.++++|+++++++++++++++.|||+++.+..+++++++|||+|+|++|++++++++..|+.+|++
T Consensus 133 ~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~ 212 (363)
T cd08279 133 GLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIA 212 (363)
T ss_pred cCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEE
Confidence 35899999999999999999999999999999999999999888899999999999988999999999999999934999
Q ss_pred EcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCc
Q 025264 101 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 179 (255)
Q Consensus 101 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 179 (255)
+++++++.+.++++|++++++++. .++.+.+.+.+.+ ++|+++|+++....+...+++++++ |+++.+|.......
T Consensus 213 ~~~~~~~~~~~~~~g~~~vv~~~~--~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~ 289 (363)
T cd08279 213 VDPVPEKLELARRFGATHTVNASE--DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGET 289 (363)
T ss_pred EcCCHHHHHHHHHhCCeEEeCCCC--ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcc
Confidence 999999999999999999998886 7888888888766 8999999999766589999999996 99999987543233
Q ss_pred cccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEE
Q 025264 180 ISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 251 (255)
Q Consensus 180 ~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 251 (255)
..++...+.. +..+.++.++.....+.+++++++++++.+.+.+.+.++|+++++++|++.+.+++..|.||
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 290 VSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 4455555543 77777776654444567889999999999876555668899999999999998877666554
No 45
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.97 E-value=1e-30 Score=217.77 Aligned_cols=213 Identities=17% Similarity=0.243 Sum_probs=165.0
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHh--hcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRV 98 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~vlI~G~g~vG~~a~~l~~~-~g~~~v 98 (255)
+|+|+||+++|+++++++|+++++++||++. ++++||+++.. ...+++|++|||+|+|++|++++|+++. .|..+|
T Consensus 114 ~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~v 192 (341)
T cd08237 114 DGFMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKL 192 (341)
T ss_pred CCceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcE
Confidence 4899999999999999999999999887665 88999998754 3457899999999999999999999996 665489
Q ss_pred EEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCc---HHHHHHHHHHhccCCceEEEEccC
Q 025264 99 IGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 99 ~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
++++++++|++++++.+++..++ ++ ..+ ++|+|||++|+ +..++.++++++++ |+++.+|..
T Consensus 193 i~~~~~~~k~~~a~~~~~~~~~~------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~ 258 (341)
T cd08237 193 VVFGKHQEKLDLFSFADETYLID------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVS 258 (341)
T ss_pred EEEeCcHhHHHHHhhcCceeehh------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeec
Confidence 99999999999998866553321 11 122 69999999994 45689999999997 999999975
Q ss_pred CCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcC---CCCCCCcceeeeecchH---HHHHHHhhCCCee
Q 025264 175 ASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKK---EIKVDEYVTHNMTLGEI---NEAFRYMHGGDCL 247 (255)
Q Consensus 175 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~a~~~~~~~~~~ 247 (255)
. .+.+++...++. ++++.|+.... ..+++++++++.++ ..++++.++++|+++++ .+|++.+.++...
T Consensus 259 ~--~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~g 333 (341)
T cd08237 259 E--YPVPINTRMVLEKGLTLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWG 333 (341)
T ss_pred C--CCcccCHHHHhhCceEEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcc
Confidence 3 234555555544 89999886432 25789999999998 33577788899998655 5555544444344
Q ss_pred EEEEecC
Q 025264 248 RCVLKMQ 254 (255)
Q Consensus 248 k~vi~~~ 254 (255)
|+||+++
T Consensus 334 Kvvi~~~ 340 (341)
T cd08237 334 KTVMEWE 340 (341)
T ss_pred eEEEEee
Confidence 9999874
No 46
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.97 E-value=1.4e-30 Score=214.11 Aligned_cols=224 Identities=20% Similarity=0.215 Sum_probs=172.8
Q ss_pred CCCCCccccCCccccccc---------CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCE
Q 025264 3 NDRKSRFSINGKPIYHFM---------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSI 73 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~---------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~ 73 (255)
|.++ .|++ ||+|+... ..|+|+||+++|++.++++|+.++++. ++++ ++.|||+++.+ . ..++++
T Consensus 74 G~~v-~~~v-GdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~ 147 (308)
T TIGR01202 74 GPDT-GFRP-GDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLP 147 (308)
T ss_pred cCCC-CCCC-CCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCc
Confidence 5566 5888 99998421 159999999999999999999998764 5555 57899998744 3 346889
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHH
Q 025264 74 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 153 (255)
Q Consensus 74 vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~ 153 (255)
|+|+|+|++|++++|+|+++|++.|++++.++++.+.++. ..++|+.+ . .++++|+||||+|.+..
T Consensus 148 vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~~~i~~~~--~---------~~~g~Dvvid~~G~~~~ 213 (308)
T TIGR01202 148 DLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---YEVLDPEK--D---------PRRDYRAIYDASGDPSL 213 (308)
T ss_pred EEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---ccccChhh--c---------cCCCCCEEEECCCCHHH
Confidence 9999999999999999999999446666666666665544 34555432 1 12379999999999876
Q ss_pred HHHHHHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecc
Q 025264 154 MRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLG 232 (255)
Q Consensus 154 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (255)
++.++++++++ |+++.+|.... ..+++...++. ++++.++... ..++++++++++++|++++.+.++++|||+
T Consensus 214 ~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~g~i~~~~~it~~~~l~ 287 (308)
T TIGR01202 214 IDTLVRRLAKG-GEIVLAGFYTE--PVNFDFVPAFMKEARLRIAAEW---QPGDLHAVRELIESGALSLDGLITHQRPAS 287 (308)
T ss_pred HHHHHHhhhcC-cEEEEEeecCC--CcccccchhhhcceEEEEeccc---chhHHHHHHHHHHcCCCChhhccceeecHH
Confidence 89999999997 99999998542 33455444444 7888776532 236799999999999998888899999999
Q ss_pred hHHHHHHHhhCCC-eeEEEEe
Q 025264 233 EINEAFRYMHGGD-CLRCVLK 252 (255)
Q Consensus 233 ~~~~a~~~~~~~~-~~k~vi~ 252 (255)
++++|++.+.++. .+|++|+
T Consensus 288 ~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 288 DAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHHHHHHhcCcCceEEEeC
Confidence 9999999876554 4599874
No 47
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.97 E-value=8.3e-30 Score=212.55 Aligned_cols=236 Identities=24% Similarity=0.318 Sum_probs=197.4
Q ss_pred CCCCCccccCCccccccc---------------------------CccceeeEEEEcCCceEEcCCCCCcccccccccch
Q 025264 3 NDRKSRFSINGKPIYHFM---------------------------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 55 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~---------------------------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 55 (255)
|.++..+++ ||+|+++. ..|+|++|+.++.++++++|+++++++++.++..+
T Consensus 73 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~ 151 (340)
T cd05284 73 GSGVDGLKE-GDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAG 151 (340)
T ss_pred CCCCCcCcC-CCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchH
Confidence 566777888 99997543 25899999999999999999999999999999999
Q ss_pred hhhhhHHHhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHH
Q 025264 56 PTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 133 (255)
Q Consensus 56 ~ta~~~l~~~-~~~~~~~~vlI~G~g~vG~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i 133 (255)
.|||+++... ..+.++++|||+|+|++|++++++|+..| . +|+++++++++.+.++++|+++++++++ . +.+.+
T Consensus 152 ~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i 227 (340)
T cd05284 152 LTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEV 227 (340)
T ss_pred HHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHH
Confidence 9999998766 46889999999999889999999999999 7 9999999999999999999999999886 5 88888
Q ss_pred HhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchh-hccCcEEEEeeeCCCCccCcHHHHH
Q 025264 134 VDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKSRSQVPWLV 211 (255)
Q Consensus 134 ~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~ 211 (255)
++.+++ ++|+++|++|++..++..+++++++ |+++.+|.... .+++... +.++.++.++... ....+.+++
T Consensus 228 ~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 300 (340)
T cd05284 228 RELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLWG---TRAELVEVV 300 (340)
T ss_pred HHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEecc---cHHHHHHHH
Confidence 888877 8999999999866589999999997 99999987532 2333333 3348888877543 235788899
Q ss_pred HHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 212 DKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
++++++.+.+ ..++|+++++++|++.+.+++.. |+++.+
T Consensus 301 ~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 301 ALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred HHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 9999998754 23679999999999999887766 888753
No 48
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.97 E-value=1.6e-29 Score=211.45 Aligned_cols=244 Identities=28% Similarity=0.429 Sum_probs=197.4
Q ss_pred CCCCCCccccCCcccccc------------------------------cCccceeeEEEEcCC--ceEEcCCCCCccccc
Q 025264 2 MNDRKSRFSINGKPIYHF------------------------------MGTSTFSQYTVVHDV--SVAKIDPQAPLDKVC 49 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~------------------------------~~~g~~ae~~~v~~~--~~~~~p~~~~~~~aa 49 (255)
.|+++..+++ ||+|++. ...|+|+||++++.+ +++++|+++++++++
T Consensus 69 vG~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa 147 (347)
T cd05278 69 VGSDVKRLKP-GDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDAL 147 (347)
T ss_pred ECCCccccCC-CCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHh
Confidence 3667777888 9988751 235899999999987 899999999999999
Q ss_pred ccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchH
Q 025264 50 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI 129 (255)
Q Consensus 50 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 129 (255)
.++.++.|||+++ ...+++++++|||.|+|++|++++|+|+.+|+.+++++++++++.+.++++|++.++++++ .++
T Consensus 148 ~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~ 224 (347)
T cd05278 148 MLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDI 224 (347)
T ss_pred hhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chH
Confidence 9999999999987 7788999999999888999999999999999647888888888888889999999999887 778
Q ss_pred HHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhccCcEEEEeeeCCCCccCcHH
Q 025264 130 QQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVP 208 (255)
Q Consensus 130 ~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 208 (255)
.+.+++.+++ ++|++||++++...+...+++++++ |+++.+|..............+.++.++.++.... .+.++
T Consensus 225 ~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 300 (347)
T cd05278 225 VEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV---RARMP 300 (347)
T ss_pred HHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc---hhHHH
Confidence 8888888776 8999999999855589999999997 99999986533211112222233477776654322 35788
Q ss_pred HHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCe-e-EEEEec
Q 025264 209 WLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC-L-RCVLKM 253 (255)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~-k~vi~~ 253 (255)
+++++++++.+.+.+.+..+|+++++++|++.+..++. . |+|+++
T Consensus 301 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 301 ELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred HHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 99999999998765445678999999999999887765 4 988864
No 49
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.97 E-value=1.4e-29 Score=210.66 Aligned_cols=216 Identities=22% Similarity=0.360 Sum_probs=182.8
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
.|+++||+.++...++++|+++++++++.+++++.|||+++. ..+++++++|||+|+|++|++++++|+.+|+ +|+++
T Consensus 116 ~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~ 193 (333)
T cd08296 116 DGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAI 193 (333)
T ss_pred CCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEE
Confidence 589999999999999999999999999999999999999874 4589999999999999999999999999999 99999
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccc
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 181 (255)
++++++.+.++++|+++++++.+ .++.+.+.+. +++|+++|++|....++..+++++++ |+++.+|... ...+
T Consensus 194 ~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~ 266 (333)
T cd08296 194 SRGSDKADLARKLGAHHYIDTSK--EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVA 266 (333)
T ss_pred eCChHHHHHHHHcCCcEEecCCC--ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCC
Confidence 99999999999999999998876 6777777665 36999999997666699999999997 9999999864 2344
Q ss_pred cCchhh-ccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEe
Q 025264 182 TRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 182 ~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
++...+ .++.++.++..+. ..++..++++++++.++. .+ ++|+++++.+|++.+.+++.. |+|++
T Consensus 267 ~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 267 VSPLQLIMGRKSIHGWPSGT---ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred cCHHHHhhcccEEEEeCcCC---HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 554444 3499998876432 256888899988887543 34 589999999999999988876 99874
No 50
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.97 E-value=1.2e-29 Score=215.40 Aligned_cols=239 Identities=18% Similarity=0.301 Sum_probs=194.4
Q ss_pred CCCCCccccCCccccccc----------------------------CccceeeEEEEcCCceEEcCCCCCcccccccccc
Q 025264 3 NDRKSRFSINGKPIYHFM----------------------------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 54 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~----------------------------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~ 54 (255)
|.++..+++ ||+|+.+. ..|+|+||++++..+++++|+++++++++.++++
T Consensus 97 G~~v~~~~~-Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~ 175 (393)
T cd08246 97 GEGVKNWKV-GDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLV 175 (393)
T ss_pred CCCCCcCCC-CCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhhccc
Confidence 566677777 88887543 2489999999999999999999999999999999
Q ss_pred hhhhhhHHHhh--cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCC-----
Q 025264 55 VPTGLGAVWNT--AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD----- 126 (255)
Q Consensus 55 ~~ta~~~l~~~--~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~----- 126 (255)
+.|||+++... .+++++++|+|+|+ |++|++++++++.+|+ +++++++++++.+.++++|++.++++++.+
T Consensus 176 ~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~ 254 (393)
T cd08246 176 GATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVL 254 (393)
T ss_pred HHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEccccccccccc
Confidence 99999987654 68999999999997 9999999999999999 888999999999999999999988865310
Q ss_pred ---------------chHHHHHHhhcCC--CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhcc
Q 025264 127 ---------------KPIQQVLVDLTDG--GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT 189 (255)
Q Consensus 127 ---------------~~~~~~i~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~ 189 (255)
..+.+.+.+.+++ ++|+++|++|... +...+++++++ |+++.+|.... ...+++...+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~l~~ 331 (393)
T cd08246 255 PDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPTSVFVCDRG-GMVVICAGTTG-YNHTYDNRYLWM 331 (393)
T ss_pred ccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHHHHHHhccC-CEEEEEcccCC-CCCCCcHHHHhh
Confidence 1356677777776 6999999999865 89999999996 99999987532 223344444444
Q ss_pred -CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCC-Cee-EEEE
Q 025264 190 -GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG-DCL-RCVL 251 (255)
Q Consensus 190 -~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~-k~vi 251 (255)
+.++.++..... +.+.+++++++++.+.+ .+.++|+++++++|++.+.++ +.. |+++
T Consensus 332 ~~~~i~g~~~~~~---~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 332 RQKRIQGSHFAND---REAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred heeEEEecccCcH---HHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence 777777654432 57888999999998653 366889999999999999877 555 8776
No 51
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.97 E-value=1.8e-29 Score=212.54 Aligned_cols=226 Identities=31% Similarity=0.487 Sum_probs=190.0
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
.|+|++|+.++.+.++++|+++++++++.++.+++|||+++.....++++++|||+|+|++|++++++|+..|+.+++++
T Consensus 139 ~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~ 218 (367)
T cd08263 139 MGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAV 218 (367)
T ss_pred CCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEE
Confidence 48999999999999999999999999999999999999998888888999999999889999999999999999339989
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 180 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 180 (255)
+.++++.+.++++|++.++++++ .++.+.+++.+++ ++|+++|++++.......+++++++ |+++.+|........
T Consensus 219 ~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 295 (367)
T cd08263 219 DVRDEKLAKAKELGATHTVNAAK--EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATA 295 (367)
T ss_pred eCCHHHHHHHHHhCCceEecCCc--ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCcc
Confidence 88999999999999999999887 7888888888766 8999999999974489999999996 999999875432233
Q ss_pred ccCchhh-ccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEe
Q 025264 181 STRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 181 ~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
.++...+ .++.++.++... ...+.+++++++++++.+.+...+.+.|+++++.+|++.+.+++.. |+|+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 296 EIPITRLVRRGIKIIGSYGA--RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred ccCHHHHhhCCeEEEecCCC--CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 4555555 347777775321 1235788899999999977655566789999999999999887755 88874
No 52
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.97 E-value=2.5e-29 Score=210.09 Aligned_cols=243 Identities=24% Similarity=0.372 Sum_probs=199.5
Q ss_pred CCCCCccccCCccccc---------------------------ccCccceeeEEEEcCC--ceEEcCCCCCccccccccc
Q 025264 3 NDRKSRFSINGKPIYH---------------------------FMGTSTFSQYTVVHDV--SVAKIDPQAPLDKVCLLGC 53 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~---------------------------~~~~g~~ae~~~v~~~--~~~~~p~~~~~~~aa~~~~ 53 (255)
|+++..+++ ||+|++ +.++|+|++|++++.. +++++|++++.++++.++.
T Consensus 70 G~~~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~ 148 (345)
T cd08260 70 GEDVSRWRV-GDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGC 148 (345)
T ss_pred CCCCccCCC-CCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhcc
Confidence 556666777 888864 3346999999999985 8999999999999999999
Q ss_pred chhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHH
Q 025264 54 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 133 (255)
Q Consensus 54 ~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i 133 (255)
+++|||+++.+..++.++++|+|+|+|++|++++++|+..|+ +|+++++++++.+.++++|++.++++++ +.++.+.+
T Consensus 149 ~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~ 226 (345)
T cd08260 149 RFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE-VEDVAAAV 226 (345)
T ss_pred chHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHH
Confidence 999999998888899999999999999999999999999999 9999999999999999999999998763 24677777
Q ss_pred HhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCc-cccCchhh-ccCcEEEEeeeCCCCccCcHHHHH
Q 025264 134 VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-ISTRPFQL-VTGRVWKGTAFGGFKSRSQVPWLV 211 (255)
Q Consensus 134 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 211 (255)
.+...+++|++|||+|+...+...+++++++ |+++.+|....... ..++...+ .++.++.++... ..+.+++++
T Consensus 227 ~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 302 (345)
T cd08260 227 RDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM---PAHRYDAML 302 (345)
T ss_pred HHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC---CHHHHHHHH
Confidence 7766558999999999755589999999997 99999987543221 34444444 347788776532 235788999
Q ss_pred HHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEe
Q 025264 212 DKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
++++++.+.+.+.+.+.++++++++|++.+..++.. |+|++
T Consensus 303 ~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 303 ALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred HHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 999999877655466789999999999999887766 88764
No 53
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.97 E-value=1.6e-29 Score=209.32 Aligned_cols=242 Identities=16% Similarity=0.209 Sum_probs=204.8
Q ss_pred CCCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-C
Q 025264 2 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-G 80 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 80 (255)
.|+++.++++ ||+|++....|+|++|++++...++++|+++++++++.+++.+.+||+++.....+.++++|+|+|+ |
T Consensus 71 ~G~~v~~~~~-Gd~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~ 149 (323)
T cd05282 71 VGSGVSGLLV-GQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANS 149 (323)
T ss_pred eCCCCCCCCC-CCEEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEccccc
Confidence 3667778888 9999987546999999999999999999999999999999999999999888888999999999987 8
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHH
Q 025264 81 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 159 (255)
Q Consensus 81 ~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~ 159 (255)
.+|++++++|+.+|+ +++++++++++.+.++++|++.++++++ .++.+.+.+.+++ ++|+++||+|+.. ....++
T Consensus 150 ~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~ 225 (323)
T cd05282 150 AVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEATGGAGARLALDAVGGES-ATRLAR 225 (323)
T ss_pred HHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHHhcCCCceEEEECCCCHH-HHHHHH
Confidence 999999999999999 9999999999999999999999998876 6788888888877 9999999999987 778899
Q ss_pred HhccCCceEEEEccCCCCCccccCchhhc-cCcEEEEeeeCCCCc-------cCcHHHHHHHHHcCCCCCCCcceeeeec
Q 025264 160 CCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNMTL 231 (255)
Q Consensus 160 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (255)
+++++ |+++.+|..... +..++...+. ++.++.++....+.. .+.+.++++++.++.+.+. +.++|++
T Consensus 226 ~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~ 301 (323)
T cd05282 226 SLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPL 301 (323)
T ss_pred hhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecH
Confidence 99996 999999876432 3455556666 588888887655421 1346778888989986543 5678999
Q ss_pred chHHHHHHHhhCCCee-EEEEe
Q 025264 232 GEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 232 ~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
+++++|++.+.++... |++++
T Consensus 302 ~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 302 EDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHHHhcCCCCceEeeC
Confidence 9999999999877666 88763
No 54
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.97 E-value=1.7e-29 Score=194.55 Aligned_cols=242 Identities=19% Similarity=0.268 Sum_probs=196.0
Q ss_pred CCCCCCccccCCccccccc-CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-
Q 025264 2 MNDRKSRFSINGKPIYHFM-GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL- 79 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~-~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~- 79 (255)
+|+++.+|++ ||.|.... +.|+|++|.+.+++.++++++.++++.||.+..+.+|||+.|.....+++||+|+-.|+
T Consensus 92 vGs~vkgfk~-Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNgan 170 (354)
T KOG0025|consen 92 VGSNVKGFKP-GDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGAN 170 (354)
T ss_pred ecCCcCccCC-CCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcc
Confidence 4788999999 99998654 45999999999999999999999999999999999999999999999999999999998
Q ss_pred ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcEEeCCCCCCchHHHHHHhh-cCC-CccEEEecCCcHHH
Q 025264 80 GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDHDKPIQQVLVDL-TDG-GVDYSFECIGNVSV 153 (255)
Q Consensus 80 g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~i~~~-~~~-~~d~v~d~~g~~~~ 153 (255)
+++|++.+|+|+++|+ +-+.+.|+....+.+ +.+||++||...+ -. .....+. ... .+.+.|||+|+..
T Consensus 171 S~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~lGA~~ViTeee--l~-~~~~~k~~~~~~~prLalNcVGGks- 245 (354)
T KOG0025|consen 171 SGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKSLGATEVITEEE--LR-DRKMKKFKGDNPRPRLALNCVGGKS- 245 (354)
T ss_pred cHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHHcCCceEecHHH--hc-chhhhhhhccCCCceEEEeccCchh-
Confidence 9999999999999999 999998888776665 5699999986543 11 1122222 223 7999999999998
Q ss_pred HHHHHHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCcc--------CcHHHHHHHHHcCCCCCCCc
Q 025264 154 MRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSR--------SQVPWLVDKYMKKEIKVDEY 224 (255)
Q Consensus 154 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 224 (255)
...+.+.|.+| |+.+.+|.. +..+.+.+...+.. ++.++|+++..|... +.+.++.++++.|++..++.
T Consensus 246 a~~iar~L~~G-gtmvTYGGM-SkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~ 323 (354)
T KOG0025|consen 246 ATEIARYLERG-GTMVTYGGM-SKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNC 323 (354)
T ss_pred HHHHHHHHhcC-ceEEEecCc-cCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccc
Confidence 78899999997 999999996 45788888777666 999999999988743 23567889999999876543
Q ss_pred ceeeeecchHHHHHHHhhCCC--eeEEEEec
Q 025264 225 VTHNMTLGEINEAFRYMHGGD--CLRCVLKM 253 (255)
Q Consensus 225 ~~~~~~~~~~~~a~~~~~~~~--~~k~vi~~ 253 (255)
...+|.+...|++...+.. ..|-++.+
T Consensus 324 --e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 324 --EKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred --eeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 4678999888888554332 23444443
No 55
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.97 E-value=4.7e-29 Score=208.47 Aligned_cols=242 Identities=24% Similarity=0.369 Sum_probs=200.0
Q ss_pred CCCCCCccccCCccccccc----------------------------CccceeeEEEEcCC--ceEEcCCCCCccccccc
Q 025264 2 MNDRKSRFSINGKPIYHFM----------------------------GTSTFSQYTVVHDV--SVAKIDPQAPLDKVCLL 51 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~----------------------------~~g~~ae~~~v~~~--~~~~~p~~~~~~~aa~~ 51 (255)
.|+++..+++ ||+|+..+ .+|+|+||+.++.. .++++|++++.++++.+
T Consensus 69 ~G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l 147 (345)
T cd08286 69 VGSAVTNFKV-GDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVML 147 (345)
T ss_pred eccCccccCC-CCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhc
Confidence 3566777888 99887542 13899999999987 89999999999999999
Q ss_pred ccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHH
Q 025264 52 GCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 131 (255)
Q Consensus 52 ~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~ 131 (255)
+++++|||+++....+++++++|||+|+|++|++++|+++.+|+.+|+++++++++.+.++++|++.++++.+ .++.+
T Consensus 148 ~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~ 225 (345)
T cd08286 148 SDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIE 225 (345)
T ss_pred cchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHH
Confidence 9999999998778889999999999988999999999999999338999888888989999999999999886 77888
Q ss_pred HHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhc-cCcEEEEeeeCCCCccCcHHH
Q 025264 132 VLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPW 209 (255)
Q Consensus 132 ~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~ 209 (255)
.+.+.+++ ++|++|||+|....++.+++.++++ |+++.+|.... ..+++...++ ++.++.+.... ...+.+
T Consensus 226 ~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 298 (345)
T cd08286 226 QVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK--PVDLHLEKLWIKNITITTGLVD----TNTTPM 298 (345)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC--CCCcCHHHHhhcCcEEEeecCc----hhhHHH
Confidence 88888777 8999999999877689999999997 99999987432 2344555533 48888765321 145788
Q ss_pred HHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCC---CeeEEEEec
Q 025264 210 LVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG---DCLRCVLKM 253 (255)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~k~vi~~ 253 (255)
++++++++.+.+.+.+.++|+++++++|++.+... ...|++|++
T Consensus 299 ~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 299 LLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred HHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 99999999977666567899999999999998865 345999864
No 56
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.97 E-value=5e-29 Score=207.66 Aligned_cols=238 Identities=26% Similarity=0.431 Sum_probs=196.6
Q ss_pred CCCCCccccCCccccc---------------------------ccCccceeeEEEEcCCceEEcCCCCCcccccccccch
Q 025264 3 NDRKSRFSINGKPIYH---------------------------FMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 55 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~---------------------------~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 55 (255)
|+++..|++ ||+|+. +...|+|++|+.++++ ++++|+++++++++++ ..+
T Consensus 69 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~ 145 (337)
T cd08261 69 GEGVAGLKV-GDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPL 145 (337)
T ss_pred CCCCCCCCC-CCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chH
Confidence 556667888 999985 2236899999999999 9999999999998877 478
Q ss_pred hhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHh
Q 025264 56 PTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 135 (255)
Q Consensus 56 ~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~ 135 (255)
+++++++ ...+++++++|||+|+|.+|.+++|+|+.+|+ +|+++++++++.+.++++|+++++++++ .++.+.+.+
T Consensus 146 ~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~ 221 (337)
T cd08261 146 AIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLRE 221 (337)
T ss_pred HHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHH
Confidence 8898876 78899999999999889999999999999999 9999999999999999999999999887 778888888
Q ss_pred hcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHH
Q 025264 136 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDK 213 (255)
Q Consensus 136 ~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~ 213 (255)
.+++ ++|+++|++|+...+...+++++++ |+++.+|.... ...++...+.. ++++.+.. ....+.+++++++
T Consensus 222 ~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 295 (337)
T cd08261 222 LTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKG--PVTFPDPEFHKKELTILGSR---NATREDFPDVIDL 295 (337)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCC--CCccCHHHHHhCCCEEEEec---cCChhhHHHHHHH
Confidence 8777 8999999998866689999999996 99999987542 23334334443 77777653 2233578899999
Q ss_pred HHcCCCCCCCcceeeeecchHHHHHHHhhCC-Cee-EEEEec
Q 025264 214 YMKKEIKVDEYVTHNMTLGEINEAFRYMHGG-DCL-RCVLKM 253 (255)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~-k~vi~~ 253 (255)
++++.+.+.+.+..+++++++++|++.+.++ ... |+|+++
T Consensus 296 ~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 296 LESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 9999977633466789999999999999877 355 999875
No 57
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.97 E-value=3.8e-29 Score=207.09 Aligned_cols=241 Identities=19% Similarity=0.196 Sum_probs=199.9
Q ss_pred CCCCCccccCCcccccccC--ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-
Q 025264 3 NDRKSRFSINGKPIYHFMG--TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL- 79 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~~--~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~- 79 (255)
|+++..+++ ||+|++... .|+|++|+.++..+++++|+++++++++.++++++||| ++....+++++++|+|+|+
T Consensus 75 G~~v~~~~~-Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~ 152 (324)
T cd08244 75 GPGVDPAWL-GRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAA 152 (324)
T ss_pred CCCCCCCCC-CCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCC
Confidence 556667887 999987652 69999999999999999999999999999999999995 5678889999999999996
Q ss_pred ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHH
Q 025264 80 GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAAL 158 (255)
Q Consensus 80 g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~ 158 (255)
|++|++++++|+.+|+ +|+++++++++.+.++++|++.++++++ .++.+.+.+.+++ ++|+++|++|++. ....+
T Consensus 153 ~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~ 228 (324)
T cd08244 153 GGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTR--PDWPDQVREALGGGGVTVVLDGVGGAI-GRAAL 228 (324)
T ss_pred chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecCC--ccHHHHHHHHcCCCCceEEEECCChHh-HHHHH
Confidence 9999999999999999 9999999999999999999988888876 7888888887777 8999999999987 79999
Q ss_pred HHhccCCceEEEEccCCCCCccccCchh-hccCcEEEEeeeCCCCc---cCcHHHHHHHHHcCCCCCCCcceeeeecchH
Q 025264 159 ECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEI 234 (255)
Q Consensus 159 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (255)
++++.+ |+++.+|..... ...++... +.++.++.++....... .+.+.++++++.++.+.. .+..+|+++++
T Consensus 229 ~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~ 304 (324)
T cd08244 229 ALLAPG-GRFLTYGWASGE-WTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERA 304 (324)
T ss_pred HHhccC-cEEEEEecCCCC-CCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHH
Confidence 999996 999999875432 22444333 33488888776543321 245677888999988643 35678999999
Q ss_pred HHHHHHhhCCCee-EEEEec
Q 025264 235 NEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 235 ~~a~~~~~~~~~~-k~vi~~ 253 (255)
++|++.+.+++.. |+++++
T Consensus 305 ~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 305 AEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHHHHHcCCCCceEEEeC
Confidence 9999999887766 998864
No 58
>PRK10083 putative oxidoreductase; Provisional
Probab=99.97 E-value=5e-29 Score=207.80 Aligned_cols=240 Identities=15% Similarity=0.228 Sum_probs=191.0
Q ss_pred CCCCCCccccCCcccc---------------------------cccCccceeeEEEEcCCceEEcCCCCCcccccccccc
Q 025264 2 MNDRKSRFSINGKPIY---------------------------HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 54 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~---------------------------~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~ 54 (255)
.|+++..+++ ||+|+ ++..+|+|+||+.++...++++|+++++++++ +..+
T Consensus 68 vG~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~ 145 (339)
T PRK10083 68 VGEGVDAARI-GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEP 145 (339)
T ss_pred ECCCCccCCC-CCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhch
Confidence 3566677777 88886 33335899999999999999999999998876 4457
Q ss_pred hhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHH
Q 025264 55 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 133 (255)
Q Consensus 55 ~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~-~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i 133 (255)
+.++++ +....+++++++|+|+|+|++|++++|+++. +|+..++++++++++.+.++++|++.++++++ .++.+.+
T Consensus 146 ~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~ 222 (339)
T PRK10083 146 FTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEAL 222 (339)
T ss_pred HHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHH
Confidence 888886 5678899999999999999999999999996 69955788888899999999999999999876 6677766
Q ss_pred HhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhc-cCcEEEEeeeCCCCccCcHHHHH
Q 025264 134 VDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLV 211 (255)
Q Consensus 134 ~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~ 211 (255)
... + ++|++||++|.+..+...+++++++ |+++.+|.... ...++...+. +++++.+... ..+.+++++
T Consensus 223 ~~~--g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 293 (339)
T PRK10083 223 EEK--GIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL----NANKFPVVI 293 (339)
T ss_pred hcC--CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec----ChhhHHHHH
Confidence 432 3 6789999999776699999999997 99999987542 2233333333 3666666542 235789999
Q ss_pred HHHHcCCCCCCCcceeeeecchHHHHHHHhhCC-Ce-eEEEEecCC
Q 025264 212 DKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG-DC-LRCVLKMQD 255 (255)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~-~k~vi~~~~ 255 (255)
++++++.+.+.+++.++|+++++++|++.+.++ .. .|+++.+.+
T Consensus 294 ~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 294 DWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred HHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 999999987655567899999999999998754 34 499998864
No 59
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.97 E-value=5.1e-29 Score=208.63 Aligned_cols=242 Identities=21% Similarity=0.312 Sum_probs=197.9
Q ss_pred CCCCCCccccCCccccccc---------------------------CccceeeEEEEcCCceEEcCCCCCcccccccccc
Q 025264 2 MNDRKSRFSINGKPIYHFM---------------------------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 54 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~---------------------------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~ 54 (255)
.|+++..+++ ||+|+++. ..|++++|+.++.+.++++|+++++++++.+++.
T Consensus 81 vG~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~ 159 (350)
T cd08240 81 VGPDAADVKV-GDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACS 159 (350)
T ss_pred eCCCCCCCCC-CCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhch
Confidence 3666777888 99987652 3589999999999999999999999999999999
Q ss_pred hhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHH
Q 025264 55 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 134 (255)
Q Consensus 55 ~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~ 134 (255)
+.|||+++.....++++++|+|+|+|++|++++|+|+..|+.+|+++++++++.+.++++|++.+++.++ .++.+.+.
T Consensus 160 ~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~ 237 (350)
T cd08240 160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSD--PDAAKRII 237 (350)
T ss_pred hhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCC--ccHHHHHH
Confidence 9999999877777778999999988999999999999999967888888999999999999988888876 67777777
Q ss_pred hhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhccCcEEEEeeeCCCCccCcHHHHHHHH
Q 025264 135 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKY 214 (255)
Q Consensus 135 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 214 (255)
+..++++|++||++|.+..+..++++++++ |+++.+|........+.... .+++.++.++..... +++.++++++
T Consensus 238 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~---~~~~~~~~ll 312 (350)
T cd08240 238 KAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTIQGSYVGSL---EELRELVALA 312 (350)
T ss_pred HHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEEEEcccCCH---HHHHHHHHHH
Confidence 766558999999999766699999999997 99999987643222222221 224778877664432 5788899999
Q ss_pred HcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 215 MKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
+++.+.+. ....|+++++++|++.+.+++.. |+++++
T Consensus 313 ~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 313 KAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred HcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 99987643 45689999999999999887765 988753
No 60
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.97 E-value=7.4e-29 Score=207.09 Aligned_cols=239 Identities=26% Similarity=0.393 Sum_probs=196.1
Q ss_pred CCCCCccccCCccccccc---------------------------CccceeeEEEEcCCc-----eEEcCCCCCcccccc
Q 025264 3 NDRKSRFSINGKPIYHFM---------------------------GTSTFSQYTVVHDVS-----VAKIDPQAPLDKVCL 50 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~---------------------------~~g~~ae~~~v~~~~-----~~~~p~~~~~~~aa~ 50 (255)
|+++..+++ ||+|+++. ..|+|++|+.++.+. ++++|+++++++++.
T Consensus 69 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~ 147 (343)
T cd08235 69 GDGVTGFKV-GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAAL 147 (343)
T ss_pred CCCCCCCCC-CCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHh
Confidence 556677888 99998652 358999999999998 999999999999877
Q ss_pred cccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCe-EEEEcCCcchHHHHHhcCCcEEeCCCCCCchH
Q 025264 51 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASR-VIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI 129 (255)
Q Consensus 51 ~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~-v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 129 (255)
+ .++.+||+++. ..+++++++|+|+|+|.+|++++|+|+..|+ + |+++++++++.+.++++|+++++++++ .++
T Consensus 148 ~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~-~~v~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~ 222 (343)
T cd08235 148 V-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGA-RKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDL 222 (343)
T ss_pred h-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEECCCHHHHHHHHHhCCcEEecCCc--cCH
Confidence 6 68899999884 4589999999999889999999999999999 7 889999999999999999999999887 788
Q ss_pred HHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhc-cCcEEEEeeeCCCCccCcH
Q 025264 130 QQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQV 207 (255)
Q Consensus 130 ~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~ 207 (255)
.+.+++.+++ ++|+++||+++...+...+++++++ |+++.+|.........++..... ++.++.++... ..+.+
T Consensus 223 ~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~ 298 (343)
T cd08235 223 VEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA---SPEDY 298 (343)
T ss_pred HHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC---ChhhH
Confidence 8888888877 8999999999775589999999996 99999987543222333333333 37777665432 23578
Q ss_pred HHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEe
Q 025264 208 PWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
+.++++++++.+.+.+.+..+|+++++++|++.+.+++ . |+|++
T Consensus 299 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 299 KEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred HHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 88999999998765444567899999999999998877 6 98874
No 61
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.97 E-value=7.5e-29 Score=207.60 Aligned_cols=220 Identities=24% Similarity=0.354 Sum_probs=182.4
Q ss_pred CccceeeEEEEcCC-ceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEE
Q 025264 21 GTSTFSQYTVVHDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVI 99 (255)
Q Consensus 21 ~~g~~ae~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~ 99 (255)
..|+|+||+.++++ .++++|+++++++++++ .+++|+|+++ +..+++++++|+|.|+|++|++++++|+.+|+..++
T Consensus 126 ~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~ 203 (350)
T cd08256 126 VNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLI 203 (350)
T ss_pred CCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEE
Confidence 35899999999988 57899999999999888 7899999987 788999999999977799999999999999985678
Q ss_pred EEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCC
Q 025264 100 GIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 178 (255)
Q Consensus 100 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 178 (255)
++++++++.+.++++|++.++++++ .++.+.+.+.+++ ++|++||++|++..+...+++++++ |+++.+|.....
T Consensus 204 ~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~- 279 (350)
T cd08256 204 VLDLKDERLALARKFGADVVLNPPE--VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDP- 279 (350)
T ss_pred EEcCCHHHHHHHHHcCCcEEecCCC--cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCC-
Confidence 8888889999899999999998876 7888888888877 8999999999765588999999996 999999875422
Q ss_pred ccccCchhh--ccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEE
Q 025264 179 EISTRPFQL--VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 179 ~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 251 (255)
..++...+ .++.++.++.... ..+.+++++++++.+++.+.+.++|+++++++|++.+.+++.. |+++
T Consensus 280 -~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 280 -VTVDWSIIGDRKELDVLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred -CccChhHhhcccccEEEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 22333322 2366777765432 3688899999999987654467899999999999999877755 8874
No 62
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.97 E-value=5.1e-29 Score=207.15 Aligned_cols=244 Identities=18% Similarity=0.257 Sum_probs=200.1
Q ss_pred CCCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-C
Q 025264 2 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-G 80 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 80 (255)
+|.++.++++ ||+|+++..+|+|++|++++.++++++|++++.++++.++.++.|||+++.+...++++++|+|+|+ |
T Consensus 73 vG~~v~~~~~-Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g 151 (334)
T PTZ00354 73 VGSDVKRFKE-GDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGAS 151 (334)
T ss_pred eCCCCCCCCC-CCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence 3566777888 9999987667999999999999999999999999999999999999999888889999999999996 9
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCch-HHHHHHhhcCC-CccEEEecCCcHHHHHHHH
Q 025264 81 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP-IQQVLVDLTDG-GVDYSFECIGNVSVMRAAL 158 (255)
Q Consensus 81 ~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~-~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~ 158 (255)
++|++++++++..|+ +++++++++++.+.++++|++.++++.. .+ +.+.+.+.+++ ++|+++|++++.. +...+
T Consensus 152 ~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~ 227 (334)
T PTZ00354 152 GVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIRYPD--EEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETA 227 (334)
T ss_pred hHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCC--hhHHHHHHHHHhCCCCceEEEECCchHH-HHHHH
Confidence 999999999999999 8888888999999999999988888765 54 77888888876 8999999998766 89999
Q ss_pred HHhccCCceEEEEccCCCCCccc-cCchhhcc-CcEEEEeeeCCCCcc-------CcHHHHHHHHHcCCCCCCCcceeee
Q 025264 159 ECCHKGWGTSVIVGVAASGQEIS-TRPFQLVT-GRVWKGTAFGGFKSR-------SQVPWLVDKYMKKEIKVDEYVTHNM 229 (255)
Q Consensus 159 ~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~-~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (255)
++++++ |+++.+|..... ... ++...+.. +.++.++........ +.+++++++++++.+.+ .+.+++
T Consensus 228 ~~l~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~ 303 (334)
T PTZ00354 228 EVLAVD-GKWIVYGFMGGA-KVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTY 303 (334)
T ss_pred HHhccC-CeEEEEecCCCC-cccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEE
Confidence 999996 999999864322 222 44444444 568888765442211 22467788888888654 356789
Q ss_pred ecchHHHHHHHhhCCCee-EEEEecC
Q 025264 230 TLGEINEAFRYMHGGDCL-RCVLKMQ 254 (255)
Q Consensus 230 ~~~~~~~a~~~~~~~~~~-k~vi~~~ 254 (255)
++++++++++.+.+++.. |+++.+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 304 PLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred cHHHHHHHHHHHHhCCCCceEEEecC
Confidence 999999999998877655 9998764
No 63
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.97 E-value=9.7e-29 Score=209.28 Aligned_cols=224 Identities=29% Similarity=0.389 Sum_probs=184.9
Q ss_pred ccceeeEEEEcCC--ceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEE
Q 025264 22 TSTFSQYTVVHDV--SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVI 99 (255)
Q Consensus 22 ~g~~ae~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~ 99 (255)
.|+|+||++++.+ .++++|++++++++++++.+++|||+++ ...+++++++|||+|+|++|++++++|+..|+.+|+
T Consensus 135 ~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi 213 (386)
T cd08283 135 AGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVI 213 (386)
T ss_pred CCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEE
Confidence 5899999999988 8999999999999999999999999998 888999999999998899999999999999984599
Q ss_pred EEcCCcchHHHHHhcCCcEEeCCCCCCc-hHHHHHHhhcCC-CccEEEecCCcH---------------------HHHHH
Q 025264 100 GIDIDPKKFDRAKNFGVTEFVNPKDHDK-PIQQVLVDLTDG-GVDYSFECIGNV---------------------SVMRA 156 (255)
Q Consensus 100 ~~~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~~i~~~~~~-~~d~v~d~~g~~---------------------~~~~~ 156 (255)
++++++++.+.+++++...++++.+ . ++.+.+.+.+++ ++|++||++|+. ..++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~vi~~~~--~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (386)
T cd08283 214 AIDRVPERLEMARSHLGAETINFEE--VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALRE 291 (386)
T ss_pred EEcCCHHHHHHHHHcCCcEEEcCCc--chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHH
Confidence 9999999999999984446777765 5 488888888877 899999999753 34789
Q ss_pred HHHHhccCCceEEEEccCCCCCccccCchh-hccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHH
Q 025264 157 ALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEIN 235 (255)
Q Consensus 157 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (255)
++++++++ |+++.+|..... ...++... +.++.++.+.... ..+.+.+++++++++.+.+.+++.++|++++++
T Consensus 292 ~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~ 366 (386)
T cd08283 292 AIQAVRKG-GTVSIIGVYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAP 366 (386)
T ss_pred HHHHhccC-CEEEEEcCCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHH
Confidence 99999997 999999876432 23344423 3347788776422 235788999999999987665566889999999
Q ss_pred HHHHHhhCCC-e-eEEEEec
Q 025264 236 EAFRYMHGGD-C-LRCVLKM 253 (255)
Q Consensus 236 ~a~~~~~~~~-~-~k~vi~~ 253 (255)
+|++.+.+++ . +|++|++
T Consensus 367 ~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 367 EAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred HHHHHHHhCCCCeEEEEecC
Confidence 9999987765 4 4999864
No 64
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=1e-28 Score=206.15 Aligned_cols=239 Identities=19% Similarity=0.347 Sum_probs=188.9
Q ss_pred CCCCCc-cccCCccccccc-----------------CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHh
Q 025264 3 NDRKSR-FSINGKPIYHFM-----------------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 64 (255)
Q Consensus 3 g~~~~~-~~~~g~~v~~~~-----------------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~ 64 (255)
|.++.. +++ ||+|+++. ..|+|+||++++.+.++++|+++++++++ ++.++++||++ ..
T Consensus 79 G~~v~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~ 155 (341)
T cd08262 79 GPGTERKLKV-GTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA-VR 155 (341)
T ss_pred CCCCcCCCCC-CCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH-HH
Confidence 555665 888 99998762 36999999999999999999999999877 56688999998 48
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHH---HHHhhcCC-C
Q 025264 65 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ---VLVDLTDG-G 140 (255)
Q Consensus 65 ~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~---~i~~~~~~-~ 140 (255)
..+++++++|||+|+|++|.+++|+++.+|+..++++++++++.+.++++|+++++++++ .+..+ .+...+.+ +
T Consensus 156 ~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~~~~~ 233 (341)
T cd08262 156 RARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAA--DSPFAAWAAELARAGGPK 233 (341)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCC--cCHHHHHHHHHHHhCCCC
Confidence 889999999999988999999999999999945777777889999999999988998775 42221 34444555 8
Q ss_pred ccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchh-hccCcEEEEeeeCCCCccCcHHHHHHHHHcCCC
Q 025264 141 VDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEI 219 (255)
Q Consensus 141 ~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (255)
+|+++|++|++..+...+++++++ |+++.+|....... +.... +.++.++.++... ..+.+++++++++++.+
T Consensus 234 ~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i 307 (341)
T cd08262 234 PAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDN--IEPALAIRKELTLQFSLGY---TPEEFADALDALAEGKV 307 (341)
T ss_pred CCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCc--cCHHHHhhcceEEEEEecc---cHHHHHHHHHHHHcCCC
Confidence 999999999864588999999996 99999987632221 22222 2346666654322 22478899999999998
Q ss_pred CCCCcceeeeecchHHHHHHHhhCCCee-EEEEe
Q 025264 220 KVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 220 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
.+.+.+.++|+++++++|++.+.+++.. |+|++
T Consensus 308 ~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 308 DVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred ChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 7665667899999999999999887766 98874
No 65
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.97 E-value=1.6e-28 Score=205.16 Aligned_cols=241 Identities=25% Similarity=0.369 Sum_probs=194.1
Q ss_pred CCCCCCccccCCccccccc-------------------------------CccceeeEEEEcCC--ceEEcCCCCCcccc
Q 025264 2 MNDRKSRFSINGKPIYHFM-------------------------------GTSTFSQYTVVHDV--SVAKIDPQAPLDKV 48 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~-------------------------------~~g~~ae~~~v~~~--~~~~~p~~~~~~~a 48 (255)
+|.++..+++ ||+|++.. .+|+|++|++++++ .++++|++++++++
T Consensus 68 vG~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a 146 (344)
T cd08284 68 VGPEVRTLKV-GDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAA 146 (344)
T ss_pred eCCCccccCC-CCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHh
Confidence 3566777888 89887642 14899999999975 99999999999999
Q ss_pred cccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCch
Q 025264 49 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 128 (255)
Q Consensus 49 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~ 128 (255)
+.++.+++|||+++. ..+++++++|+|+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|+. +++.+. .+
T Consensus 147 ~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~--~~ 222 (344)
T cd08284 147 LLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFED--AE 222 (344)
T ss_pred hhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCC--cC
Confidence 999999999999874 57899999999998899999999999999964788998888899888999975 466665 67
Q ss_pred HHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchh-hccCcEEEEeeeCCCCccCc
Q 025264 129 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKSRSQ 206 (255)
Q Consensus 129 ~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~ 206 (255)
+.+.+.+.+++ ++|++||++++...+...+++++++ |+++.+|..... ........ +.++.++.+.. ....+.
T Consensus 223 ~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~ 297 (344)
T cd08284 223 PVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAE-EFPFPGLDAYNKNLTLRFGR---CPVRSL 297 (344)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCC-CccccHHHHhhcCcEEEEec---CCcchh
Confidence 88888888776 8999999999876689999999996 999999976422 22233333 33477776442 123467
Q ss_pred HHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEe
Q 025264 207 VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 252 (255)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 252 (255)
+.++++++.++.+.+.+.+.++|++++++++++.+.+++..|+|++
T Consensus 298 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 298 FPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred HHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 8999999999997765556678999999999998876655788875
No 66
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=1.5e-28 Score=205.22 Aligned_cols=219 Identities=28% Similarity=0.426 Sum_probs=180.2
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
.|+|++|++++++.++++|+++++++++.+ .++.+|++++ ...+++++++|+|+|+|++|++++|+|+.+|+..|+++
T Consensus 116 ~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~ 193 (343)
T cd05285 116 DGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVT 193 (343)
T ss_pred CCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE
Confidence 589999999999999999999999998877 4788999986 88999999999999889999999999999999338999
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchH---HHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCC
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPI---QQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 177 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~---~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 177 (255)
++++++.+.++++|++.++++++ .++ .+.+.+.+++ ++|+++||+|....+...+++++++ |+++.+|.....
T Consensus 194 ~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~ 270 (343)
T cd05285 194 DIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE 270 (343)
T ss_pred CCCHHHHHHHHHcCCcEEecccc--ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC
Confidence 98999999999999999998876 553 7778887777 8999999999875589999999996 999999864321
Q ss_pred CccccCchhhc-cCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCC--eeEEEE
Q 025264 178 QEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD--CLRCVL 251 (255)
Q Consensus 178 ~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~k~vi 251 (255)
..++..... ++.++.++... .+.+.+++++++++.+.+.+.+.++|+++++.+|++.+.+++ .+|++|
T Consensus 271 --~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 271 --VTLPLSAASLREIDIRGVFRY----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred --CccCHHHHhhCCcEEEEeccC----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 233333333 36677665422 256888999999998765445667899999999999988764 369998
No 67
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.97 E-value=1.7e-28 Score=208.57 Aligned_cols=224 Identities=20% Similarity=0.305 Sum_probs=183.4
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHh--hcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRV 98 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v 98 (255)
.|+|+||++++..+++++|+++++++++.++.++.|||+++.. ..+++++++|+|+|+ |++|++++++++.+|+ ++
T Consensus 139 ~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~v 217 (398)
T TIGR01751 139 FGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NP 217 (398)
T ss_pred CccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eE
Confidence 5899999999999999999999999999999999999998754 477899999999997 9999999999999999 88
Q ss_pred EEEcCCcchHHHHHhcCCcEEeCCCCCC--------------------chHHHHHHhhcCC-CccEEEecCCcHHHHHHH
Q 025264 99 IGIDIDPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAA 157 (255)
Q Consensus 99 ~~~~~~~~~~~~~~~~g~~~vi~~~~~~--------------------~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~ 157 (255)
+++++++++.+.++++|++.++|+++.+ ..+.+.+.+.+++ ++|++|||+|... +..+
T Consensus 218 i~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~ 296 (398)
T TIGR01751 218 VAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTS 296 (398)
T ss_pred EEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHH
Confidence 8888899999999999999999875410 1255667777776 8999999999765 8999
Q ss_pred HHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHH
Q 025264 158 LECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINE 236 (255)
Q Consensus 158 ~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (255)
+++++++ |+++.+|.... ....++...+.. +.++.++..... .++.+++++++++.+.. .+.++++++++++
T Consensus 297 ~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~ 369 (398)
T TIGR01751 297 VFVCRRG-GMVVICGGTTG-YNHDYDNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGRIDP--TLSKVYPLEEIGQ 369 (398)
T ss_pred HHhhccC-CEEEEEccccC-CCCCcCHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCCccc--ceeeEEcHHHHHH
Confidence 9999996 99999988643 223333333333 667776654332 45788999999998653 3668999999999
Q ss_pred HHHHhhCCCee-EEEEecC
Q 025264 237 AFRYMHGGDCL-RCVLKMQ 254 (255)
Q Consensus 237 a~~~~~~~~~~-k~vi~~~ 254 (255)
+++.+.++... |+|+++.
T Consensus 370 a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 370 AHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred HHHHHHcCCCCceEEEEeC
Confidence 99999877766 9998764
No 68
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.97 E-value=2.9e-28 Score=203.34 Aligned_cols=238 Identities=27% Similarity=0.383 Sum_probs=197.2
Q ss_pred CCCCCccccCCccccccc----------------------------CccceeeEEEEcCCceEEcCCCCCcccccccccc
Q 025264 3 NDRKSRFSINGKPIYHFM----------------------------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 54 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~----------------------------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~ 54 (255)
|+++..+++ ||+|+.++ ..|++++|+.++.+.++++|+++++++++.++..
T Consensus 72 G~~~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~ 150 (341)
T cd08297 72 GPGVSGLKV-GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCA 150 (341)
T ss_pred CCCCCCCCC-CCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcc
Confidence 556667777 88887531 2589999999999999999999999999999999
Q ss_pred hhhhhhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHH
Q 025264 55 VPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 133 (255)
Q Consensus 55 ~~ta~~~l~~~~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i 133 (255)
+.|||+++.. .+++++++|||+|+ +.+|++++++++++|+ +|+++++++++.+.++++|++.++++++ .++.+.+
T Consensus 151 ~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~ 226 (341)
T cd08297 151 GVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAV 226 (341)
T ss_pred hHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHH
Confidence 9999998755 58999999999997 6799999999999999 9999999999999999999999999887 6888888
Q ss_pred HhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhc-cCcEEEEeeeCCCCccCcHHHHH
Q 025264 134 VDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLV 211 (255)
Q Consensus 134 ~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~ 211 (255)
.+.+++ ++|+++|+.+....+...+++++++ |+++.+|.... ...+++...+. ++.++.+.... ..+.+++++
T Consensus 227 ~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 301 (341)
T cd08297 227 KELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVG---TRQDLQEAL 301 (341)
T ss_pred HHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccC---CHHHHHHHH
Confidence 888876 8999999887766689999999997 99999987542 22244444333 37788775432 136788999
Q ss_pred HHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 212 DKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
++++++.+.+ .+ .+|++++++++++.+..+... |+++++
T Consensus 302 ~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 302 EFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred HHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 9999998754 34 579999999999999887766 999875
No 69
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.97 E-value=3.7e-28 Score=205.65 Aligned_cols=242 Identities=22% Similarity=0.318 Sum_probs=190.3
Q ss_pred CCCCCccccCCccccc---------------------------ccCccceeeEEEEcCCceEEcCCCC-------Ccccc
Q 025264 3 NDRKSRFSINGKPIYH---------------------------FMGTSTFSQYTVVHDVSVAKIDPQA-------PLDKV 48 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~---------------------------~~~~g~~ae~~~v~~~~~~~~p~~~-------~~~~a 48 (255)
|.++..|++ ||+|+. +..+|+|++|+++++..++++|+++ +.+ +
T Consensus 103 G~~v~~~~~-Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~ 180 (384)
T cd08265 103 GKNVKNFEK-GDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-A 180 (384)
T ss_pred CCCCCCCCC-CCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-H
Confidence 556667777 888863 3336899999999999999999863 444 5
Q ss_pred cccccchhhhhhHHHhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCC-C
Q 025264 49 CLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH-D 126 (255)
Q Consensus 49 a~~~~~~~ta~~~l~~~-~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~-~ 126 (255)
++++.++++||+++... .+++++++|+|+|+|++|++++|+|+.+|+.+|+++++++++.+.++++|+++++++++. .
T Consensus 181 a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~ 260 (384)
T cd08265 181 GALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRD 260 (384)
T ss_pred hhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEccccccc
Confidence 55666899999998666 789999999999889999999999999998669999988888888999999999987741 1
Q ss_pred chHHHHHHhhcCC-CccEEEecCCcH-HHHHHHHHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCc
Q 025264 127 KPIQQVLVDLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS 203 (255)
Q Consensus 127 ~~~~~~i~~~~~~-~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 203 (255)
.++.+.+++.+++ ++|+|+|++|.+ ..+...+++++++ |+++.+|.... ..+++...+.. ..++.++.... .
T Consensus 261 ~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~~~~~~--~ 335 (384)
T cd08265 261 CLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLEVLQVRRAQIVGAQGHS--G 335 (384)
T ss_pred ccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHHHHhhCceEEEEeeccC--C
Confidence 3788888888887 899999999973 3478999999996 99999986532 23333333333 66777764321 2
Q ss_pred cCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEE
Q 025264 204 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 251 (255)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 251 (255)
...+.+++++++++.+.+...+.++|+++++++|++.+.++...|+++
T Consensus 336 ~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 336 HGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred cchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 246899999999999876555668899999999999976654448775
No 70
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.97 E-value=8.1e-30 Score=225.48 Aligned_cols=236 Identities=17% Similarity=0.207 Sum_probs=209.5
Q ss_pred CcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHH
Q 025264 13 GKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAK 91 (255)
Q Consensus 13 g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~vG~~a~~l~~ 91 (255)
|.||.+..+.-++|+.+.++.+++|.+|++.++++|+..|+.+.|||++|+.+++.++|+++||+++ |++|++++.+|.
T Consensus 1495 GrRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiAL 1574 (2376)
T KOG1202|consen 1495 GRRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIAL 1574 (2376)
T ss_pred CcEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHH
Confidence 6777777666789999999999999999999999999999999999999999999999999999965 999999999999
Q ss_pred HcCCCeEEEEcCCcchHHHHHhc----CCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCc
Q 025264 92 AAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWG 166 (255)
Q Consensus 92 ~~g~~~v~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G 166 (255)
+.|+ +|+.++.|.+|++++++. ..+++-|+++ .+|...+.+.|+| |+|+|++....+. ++.+++||+.. |
T Consensus 1575 a~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd--tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-G 1649 (2376)
T KOG1202|consen 1575 AHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRD--TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-G 1649 (2376)
T ss_pred HcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccc--ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-C
Confidence 9999 999999999999999653 3567788888 9999999999999 9999999999888 99999999997 9
Q ss_pred eEEEEccCCCCCccccCchhhccCcEEEEeeeCCCCc--cCcHHHHHHHHHcCCCC--CCCcceeeeecchHHHHHHHhh
Q 025264 167 TSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS--RSQVPWLVDKYMKKEIK--VDEYVTHNMTLGEINEAFRYMH 242 (255)
Q Consensus 167 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~~ 242 (255)
|+..+|..+-+...++.+..|+++.+++|..+..... .+.++++..++++|.-. ..|+.+++|+-.++++||+++.
T Consensus 1650 RFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMa 1729 (2376)
T KOG1202|consen 1650 RFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMA 1729 (2376)
T ss_pred eeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHh
Confidence 9999998877777778888888999999998766543 24567788888776432 5667778999999999999999
Q ss_pred CCCee-EEEEec
Q 025264 243 GGDCL-RCVLKM 253 (255)
Q Consensus 243 ~~~~~-k~vi~~ 253 (255)
+++++ |+|++.
T Consensus 1730 sGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1730 SGKHIGKVVIKV 1741 (2376)
T ss_pred ccCccceEEEEE
Confidence 99998 999986
No 71
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=2.7e-28 Score=204.24 Aligned_cols=236 Identities=22% Similarity=0.265 Sum_probs=190.9
Q ss_pred CCCCCCccccCCcccccc----------------c---CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHH
Q 025264 2 MNDRKSRFSINGKPIYHF----------------M---GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 62 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~----------------~---~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l 62 (255)
+|+++..|++ ||+|++. . .+|++++|+.++...++++|+++++++++.+++++.|||+++
T Consensus 92 vG~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~ 170 (350)
T cd08274 92 VGEGVDTARI-GERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML 170 (350)
T ss_pred eCCCCCCCCC-CCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH
Confidence 3566777888 9999762 1 248999999999999999999999999999999999999987
Q ss_pred HhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-C
Q 025264 63 WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-G 140 (255)
Q Consensus 63 ~~~~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~ 140 (255)
...+++++++|||+|+ |++|++++++++.+|+ +++++++++ +.+.++++|++.+++..+ ....+ ...+.+ +
T Consensus 171 -~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~--~~~~~~~~ 243 (350)
T cd08274 171 -ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAGAA-KEEAVRALGADTVILRDA--PLLAD--AKALGGEP 243 (350)
T ss_pred -hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCch-hhHHHHhcCCeEEEeCCC--ccHHH--HHhhCCCC
Confidence 7789999999999998 9999999999999999 898888665 888889999976666543 44433 445555 8
Q ss_pred ccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhc-cCcEEEEeeeCCCCccCcHHHHHHHHHcCCC
Q 025264 141 VDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEI 219 (255)
Q Consensus 141 ~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (255)
+|++||++|++. ++.++++++.+ |+++.+|.... ...+++...++ ++.++.++.... ...+.++++++.++.+
T Consensus 244 ~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l 317 (350)
T cd08274 244 VDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGAIAG-PVVELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEI 317 (350)
T ss_pred CcEEEecCCHHH-HHHHHHHhccC-CEEEEecccCC-ccccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCc
Confidence 999999999876 99999999997 99999987532 22345555533 488888876532 3578899999999986
Q ss_pred CCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 220 KVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 220 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
.+ .+.++|+++++++|++.+..+... |+++++
T Consensus 318 ~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 318 RP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred cc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 53 356789999999999999877665 988863
No 72
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.96 E-value=6e-28 Score=201.08 Aligned_cols=237 Identities=27% Similarity=0.400 Sum_probs=195.7
Q ss_pred CCCCCccccCCccccc---------------------------ccCccceeeEEEEcCCceEEcCCCCCcccccccccch
Q 025264 3 NDRKSRFSINGKPIYH---------------------------FMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 55 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~---------------------------~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 55 (255)
|+++..+++ ||+|+. +...|+|++|+.++.+.++++|++++.++++.++.++
T Consensus 72 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~ 150 (338)
T cd08254 72 GAGVTNFKV-GDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAV 150 (338)
T ss_pred CCCCccCCC-CCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchH
Confidence 556667777 888864 1125899999999999999999999999999999999
Q ss_pred hhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHh
Q 025264 56 PTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 135 (255)
Q Consensus 56 ~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~ 135 (255)
+|||+++.....++++++|||.|+|++|++++++|+..|+ +|+++++++++.+.++++|++++++.++ ....+.+ .
T Consensus 151 ~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~~-~ 226 (338)
T cd08254 151 LTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD--DSPKDKK-A 226 (338)
T ss_pred HHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC--cCHHHHH-H
Confidence 9999998888889999999998889999999999999999 8999999999999999999988888776 6666666 4
Q ss_pred hcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHH
Q 025264 136 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDK 213 (255)
Q Consensus 136 ~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~ 213 (255)
.+.+ ++|+++||+|....++.++++++++ |+++.+|.... ...++...+.. +.++.++... ..+.+..++++
T Consensus 227 ~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l 300 (338)
T cd08254 227 AGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD--KLTVDLSDLIARELRIIGSFGG---TPEDLPEVLDL 300 (338)
T ss_pred HhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC--CCccCHHHHhhCccEEEEeccC---CHHHHHHHHHH
Confidence 5555 8999999999776699999999997 99999987532 22344444444 7777775432 23678899999
Q ss_pred HHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 214 YMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
++++.+.+. .+++++++++++++.+.+++.. |+++++
T Consensus 301 l~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 301 IAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 999997654 4689999999999999888766 998864
No 73
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.96 E-value=1.9e-28 Score=204.43 Aligned_cols=242 Identities=19% Similarity=0.236 Sum_probs=196.8
Q ss_pred CCCCCccccCCccccccc-CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-C
Q 025264 3 NDRKSRFSINGKPIYHFM-GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-G 80 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~-~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 80 (255)
|+++..|++ ||+|++.. +.|+|++|+.++..+++++|+++++++++.+++++.|||+++.....++++++|||+|+ |
T Consensus 79 G~~v~~~~~-Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g 157 (341)
T cd08290 79 GSGVKSLKP-GDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANS 157 (341)
T ss_pred CCCCCCCCC-CCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchh
Confidence 556667888 99998764 36999999999999999999999999999999999999999877788999999999987 9
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCc----chHHHHHhcCCcEEeCCCCCCc---hHHHHHHhhcCCCccEEEecCCcHHH
Q 025264 81 TVGLAVAEGAKAAGASRVIGIDIDP----KKFDRAKNFGVTEFVNPKDHDK---PIQQVLVDLTDGGVDYSFECIGNVSV 153 (255)
Q Consensus 81 ~vG~~a~~l~~~~g~~~v~~~~~~~----~~~~~~~~~g~~~vi~~~~~~~---~~~~~i~~~~~~~~d~v~d~~g~~~~ 153 (255)
++|++++|+|+..|+ +++++++++ ++.++++++|+++++++++ . ++.+.+...+++++|++|||+|+..
T Consensus 158 ~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~i~~~~~~~~d~vld~~g~~~- 233 (341)
T cd08290 158 AVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKALGADHVLTEEE--LRSLLATELLKSAPGGRPKLALNCVGGKS- 233 (341)
T ss_pred HHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHHhcCCCEEEeCcc--cccccHHHHHHHHcCCCceEEEECcCcHh-
Confidence 999999999999999 888888766 6688888999999998775 4 6777777766557999999999987
Q ss_pred HHHHHHHhccCCceEEEEccCCCCCccccCchh-hccCcEEEEeeeCCCCc-------cCcHHHHHHHHHcCCCCCCCcc
Q 025264 154 MRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKS-------RSQVPWLVDKYMKKEIKVDEYV 225 (255)
Q Consensus 154 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 225 (255)
+...+++++++ |+++.+|.... ....++... +.++.++.+.....+.. ...+.++++++.++.+.+. .
T Consensus 234 ~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~ 309 (341)
T cd08290 234 ATELARLLSPG-GTMVTYGGMSG-QPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--P 309 (341)
T ss_pred HHHHHHHhCCC-CEEEEEeccCC-CCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--c
Confidence 77899999996 99999986432 223344433 44488998887543211 1247778899999987654 3
Q ss_pred eeee---ecchHHHHHHHhhCCCee-EEEEec
Q 025264 226 THNM---TLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 226 ~~~~---~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
..++ +++++++|++.+.++... |+|+++
T Consensus 310 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 310 VEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred ccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 3456 999999999999877766 999864
No 74
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.96 E-value=7e-28 Score=200.97 Aligned_cols=242 Identities=23% Similarity=0.304 Sum_probs=190.9
Q ss_pred CCCCCccccCCccccc---------------------------ccCccceeeEEEEcCCceEEcCCCCCcccccccccch
Q 025264 3 NDRKSRFSINGKPIYH---------------------------FMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 55 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~---------------------------~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 55 (255)
|+++..|++ ||+|++ +...|+|++|++++++.++++|++++.+++ +++.++
T Consensus 71 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~ 148 (340)
T TIGR00692 71 GPGVEGIKV-GDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPL 148 (340)
T ss_pred CCCCCcCCC-CCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchH
Confidence 566777888 999975 224589999999999999999999998655 466788
Q ss_pred hhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHh
Q 025264 56 PTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 135 (255)
Q Consensus 56 ~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~ 135 (255)
.+|++++ ....+++++|+|.|+|++|.+++|+++.+|+..|+++++++++.+.++++|++.++++.+ .++.+.+.+
T Consensus 149 ~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~l~~ 224 (340)
T TIGR00692 149 GNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVAD 224 (340)
T ss_pred HHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cCHHHHHHH
Confidence 9999875 345789999999888999999999999999933888888888999899999988898876 788888888
Q ss_pred hcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhccCcEEEEeeeCCCCccCcHHHHHHHH
Q 025264 136 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKY 214 (255)
Q Consensus 136 ~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 214 (255)
.+++ ++|+++||+|+...+...+++++++ |+++.+|........++....++++.++.++.. ....+.+.++++++
T Consensus 225 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l 301 (340)
T TIGR00692 225 LTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFETWYTVSRLI 301 (340)
T ss_pred hcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhhHHHHHHHH
Confidence 8776 8999999999876689999999996 999999875322122221112233667766542 11224578899999
Q ss_pred HcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEec
Q 025264 215 MKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 253 (255)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 253 (255)
+++.+++.+.+.+.+++++++++++.+.++...|+|+++
T Consensus 302 ~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 302 QSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 999987545567899999999999998876645998864
No 75
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.96 E-value=1.7e-28 Score=203.64 Aligned_cols=244 Identities=20% Similarity=0.235 Sum_probs=193.1
Q ss_pred CCCCCccccCCcccccc-cCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-C
Q 025264 3 NDRKSRFSINGKPIYHF-MGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-G 80 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~-~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 80 (255)
|.++..+++ ||+|+.. .+.|+|++|+.++...++++|+++++++++.++..+.+||.++.....++++++|+|+|+ |
T Consensus 73 G~~v~~~~~-Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g 151 (327)
T PRK10754 73 GSGVKHIKV-GDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAG 151 (327)
T ss_pred CCCCCCCCC-CCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCc
Confidence 556677888 9999754 346899999999999999999999999999888899999999888889999999999976 9
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHH
Q 025264 81 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 159 (255)
Q Consensus 81 ~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~ 159 (255)
.+|++++++++.+|+ +|+++++++++.++++++|++++++.++ .++.+.+++.+++ ++|+++||+++.. ....++
T Consensus 152 ~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~ 227 (327)
T PRK10754 152 GVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYRE--ENIVERVKEITGGKKVRVVYDSVGKDT-WEASLD 227 (327)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCCC--CcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHH
Confidence 999999999999999 9999999999999999999988998876 7888889988887 8999999999866 889999
Q ss_pred HhccCCceEEEEccCCCCCccccCchhhcc-CcEE-EEeee-CCCCcc----CcHHHHHHHHHcCCCCCCCcceeeeecc
Q 025264 160 CCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW-KGTAF-GGFKSR----SQVPWLVDKYMKKEIKVDEYVTHNMTLG 232 (255)
Q Consensus 160 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~-~g~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (255)
+++++ |+++.+|..... ...++...+.+ +..+ ..... ...... +.+.++++++.++.+.+.....++|+++
T Consensus 228 ~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~ 305 (327)
T PRK10754 228 CLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLK 305 (327)
T ss_pred HhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHH
Confidence 99996 999999875421 11222222212 1111 00010 111111 2345678899999987554456789999
Q ss_pred hHHHHHHHhhCCCee-EEEEec
Q 025264 233 EINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 233 ~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
+++++++.+.++... |+||.+
T Consensus 306 ~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 306 DAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred HHHHHHHHHHcCCCcceEEEeC
Confidence 999999999887766 999863
No 76
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.96 E-value=7.7e-28 Score=200.96 Aligned_cols=242 Identities=24% Similarity=0.370 Sum_probs=194.0
Q ss_pred CCCCCccccCCccccccc---------------------------CccceeeEEEEcCCceEEcCCCCCcccccccccch
Q 025264 3 NDRKSRFSINGKPIYHFM---------------------------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 55 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~---------------------------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 55 (255)
|+++..|++ ||+|+++. ..|+|++|++++++.++++|+++++++++.+ ..+
T Consensus 68 g~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~ 145 (343)
T cd08236 68 GSGVDDLAV-GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPA 145 (343)
T ss_pred CCCCCcCCC-CCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chH
Confidence 556677888 99998752 3589999999999999999999999998887 578
Q ss_pred hhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHh
Q 025264 56 PTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 135 (255)
Q Consensus 56 ~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~ 135 (255)
+|||+++. ..+++++++|+|+|+|.+|.+++|+|+.+|+.+|+++++++++.+.++++|++.++++++ .. .+.+.+
T Consensus 146 ~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~ 221 (343)
T cd08236 146 AVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRE 221 (343)
T ss_pred HHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHH
Confidence 99999874 788999999999988999999999999999933999999999999999999988998876 56 777777
Q ss_pred hcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcccc-Cchhh-ccCcEEEEeeeCCCC--ccCcHHHH
Q 025264 136 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST-RPFQL-VTGRVWKGTAFGGFK--SRSQVPWL 210 (255)
Q Consensus 136 ~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~-~~~~~~~g~~~~~~~--~~~~~~~~ 210 (255)
..++ ++|+++||+|....+..++++++++ |+++.+|.......+.. +...+ .++.++.++...... ..+.++++
T Consensus 222 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (343)
T cd08236 222 LTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTA 300 (343)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHH
Confidence 7777 8999999998876689999999996 99999987542211111 22222 348888887653321 13567888
Q ss_pred HHHHHcCCCCCCCcceeeeecchHHHHHHHhhC-CCee-EEEE
Q 025264 211 VDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG-GDCL-RCVL 251 (255)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~-k~vi 251 (255)
.++++++.+.+.+.+..++++++++++++.+.+ +... |+|+
T Consensus 301 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 301 LDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred HHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 999999987644446678999999999999987 5545 8764
No 77
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.96 E-value=8.5e-28 Score=200.86 Aligned_cols=242 Identities=25% Similarity=0.349 Sum_probs=193.7
Q ss_pred CCCCCCccccCCccccc-cc--------------------------CccceeeEEEEcCC--ceEEcCCCCCccccc---
Q 025264 2 MNDRKSRFSINGKPIYH-FM--------------------------GTSTFSQYTVVHDV--SVAKIDPQAPLDKVC--- 49 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~-~~--------------------------~~g~~ae~~~v~~~--~~~~~p~~~~~~~aa--- 49 (255)
.|+++..+++ ||+|++ +. .+|+|+||+.++.+ .++++|++++++.+.
T Consensus 68 vG~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~ 146 (345)
T cd08287 68 VGSEVTSVKP-GDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPS 146 (345)
T ss_pred eCCCCCccCC-CCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhh
Confidence 3566667777 888865 21 13899999999975 899999999873221
Q ss_pred --ccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCc
Q 025264 50 --LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 127 (255)
Q Consensus 50 --~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 127 (255)
++...+.|||+++ ....++++++|+|.|+|++|++++|+|+..|+..++++++++++.+.++++|++.++++++ .
T Consensus 147 ~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~ 223 (345)
T cd08287 147 LLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--E 223 (345)
T ss_pred hHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--c
Confidence 2235688999987 5778999999999888999999999999999944888888888888889999999999887 7
Q ss_pred hHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCc-hhhccCcEEEEeeeCCCCccC
Q 025264 128 PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKGTAFGGFKSRS 205 (255)
Q Consensus 128 ~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~ 205 (255)
++.+.+.+.+++ ++|+++|++|++..+..++++++++ |+++.+|.... ...++. ..+.++.++.+.... ..+
T Consensus 224 ~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~ 297 (345)
T cd08287 224 EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAGGPAP---VRR 297 (345)
T ss_pred cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEEecCC---cHH
Confidence 888888888877 8999999999877699999999996 99999987542 234444 334458888775322 235
Q ss_pred cHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEec
Q 025264 206 QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 253 (255)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 253 (255)
.++++++++.++.+.+.+.+.++++++++++|++.+.++...|++|++
T Consensus 298 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~~ 345 (345)
T cd08287 298 YLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLRP 345 (345)
T ss_pred HHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeCC
Confidence 789999999999987655556889999999999998877777999864
No 78
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.96 E-value=8.9e-28 Score=197.92 Aligned_cols=239 Identities=22% Similarity=0.289 Sum_probs=191.7
Q ss_pred CCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChH
Q 025264 3 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTV 82 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~v 82 (255)
|+++..+++ ||+|+.+. .|+|++|++++++.++++|+++ ..++....+++++++++. ..+++++++|+|+|+|.+
T Consensus 67 G~~v~~~~~-Gd~V~~~~-~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~v 141 (312)
T cd08269 67 GPGVRGLAV-GDRVAGLS-GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFI 141 (312)
T ss_pred CCCCcCCCC-CCEEEEec-CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHH
Confidence 556667888 99998763 5899999999999999999988 233322267889999874 888999999999988999
Q ss_pred HHHHHHHHHHcCCCe-EEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHH
Q 025264 83 GLAVAEGAKAAGASR-VIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 160 (255)
Q Consensus 83 G~~a~~l~~~~g~~~-v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~ 160 (255)
|++++++|+..|+ + |+++++++++.+.++++|++.+++++. .++.+.+.+.+.+ ++|+++||+|....+...+++
T Consensus 142 g~~~~~la~~~g~-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~ 218 (312)
T cd08269 142 GLLFLQLAAAAGA-RRVIAIDRRPARLALARELGATEVVTDDS--EAIVERVRELTGGAGADVVIEAVGHQWPLDLAGEL 218 (312)
T ss_pred HHHHHHHHHHcCC-cEEEEECCCHHHHHHHHHhCCceEecCCC--cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHH
Confidence 9999999999999 7 999999989999889999998888776 7888888888877 999999999887668999999
Q ss_pred hccCCceEEEEccCCCCCccccCchhhc-cCcEEEEeeeCCCC-ccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHH
Q 025264 161 CHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK-SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAF 238 (255)
Q Consensus 161 l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 238 (255)
++++ |+++.+|... ..+.+++..... ++.++.++...... ..+.+++++++++++.+.+...+.++|+++++++|+
T Consensus 219 l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~ 296 (312)
T cd08269 219 VAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAF 296 (312)
T ss_pred hccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHH
Confidence 9997 9999998753 223344433333 37777666433221 235788999999999977644456789999999999
Q ss_pred HHhhCCCe--eEEEE
Q 025264 239 RYMHGGDC--LRCVL 251 (255)
Q Consensus 239 ~~~~~~~~--~k~vi 251 (255)
+.+.+++. +|+++
T Consensus 297 ~~~~~~~~~~~~~~~ 311 (312)
T cd08269 297 EAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHhCCCCceEEEe
Confidence 99987753 49886
No 79
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.96 E-value=4.7e-28 Score=201.66 Aligned_cols=238 Identities=13% Similarity=0.179 Sum_probs=188.2
Q ss_pred CCCCCCccccCCccccccc---CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCC-----CCE
Q 025264 2 MNDRKSRFSINGKPIYHFM---GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSI 73 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~---~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~ 73 (255)
+|.++.+|++ ||+|+++. ..|+|++|++++++.++++|+++++++++.+++++.|||+++....++++ +++
T Consensus 73 vG~~v~~~~~-Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~ 151 (336)
T TIGR02817 73 VGDEVTLFKP-GDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRA 151 (336)
T ss_pred eCCCCCCCCC-CCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCE
Confidence 4667788999 99998763 35999999999999999999999999999999999999999888888887 999
Q ss_pred EEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcH
Q 025264 74 VAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 151 (255)
Q Consensus 74 vlI~G~-g~vG~~a~~l~~~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~ 151 (255)
|||+|+ |++|++++|+|+.+ |+ +|+++++++++.+.++++|+++++++. .++.+.+++..++++|+++|++++.
T Consensus 152 vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~i~~~~~~~vd~vl~~~~~~ 227 (336)
T TIGR02817 152 LLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHS---KPLKAQLEKLGLEAVSYVFSLTHTD 227 (336)
T ss_pred EEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECC---CCHHHHHHHhcCCCCCEEEEcCCcH
Confidence 999987 99999999999998 99 999999999999999999999998865 4566777765434899999998765
Q ss_pred HHHHHHHHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeC--CCC-c------cCcHHHHHHHHHcCCCCC
Q 025264 152 SVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG--GFK-S------RSQVPWLVDKYMKKEIKV 221 (255)
Q Consensus 152 ~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~--~~~-~------~~~~~~~~~~~~~~~~~~ 221 (255)
..+...+++++++ |+++.++.. ..++...+.. +.++.+.... ... . ...++++++++.++.+++
T Consensus 228 ~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~ 301 (336)
T TIGR02817 228 QHFKEIVELLAPQ-GRFALIDDP-----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRT 301 (336)
T ss_pred HHHHHHHHHhccC-CEEEEEccc-----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeec
Confidence 6589999999996 999988532 1233333333 4555543322 111 0 134678899999998654
Q ss_pred CCcceeee---ecchHHHHHHHhhCCCee-EEEEe
Q 025264 222 DEYVTHNM---TLGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 222 ~~~~~~~~---~~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
. +.+.+ +++++++|++.+.+++.. |++++
T Consensus 302 ~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 302 T--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred c--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 2 23344 478999999999888765 88764
No 80
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=5.2e-28 Score=198.74 Aligned_cols=234 Identities=21% Similarity=0.241 Sum_probs=190.2
Q ss_pred CCCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-C
Q 025264 2 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-G 80 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 80 (255)
.|+++..|++ ||+|+++...|+|++|+.++.++++++|+++++++++++++.+.|||+++...... ++++|+|+|+ |
T Consensus 66 ~G~~v~~~~~-Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~ 143 (305)
T cd08270 66 AAADGSGPAV-GARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASG 143 (305)
T ss_pred eCCCCCCCCC-CCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCc
Confidence 3566777888 99999876679999999999999999999999999999999999999988665555 5999999998 9
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHH
Q 025264 81 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALEC 160 (255)
Q Consensus 81 ~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~ 160 (255)
++|++++++++..|+ +|+.+++++++.+.++++|++.+++... +..++++|+++|++|+.. +...+++
T Consensus 144 ~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~~~~~d~vl~~~g~~~-~~~~~~~ 211 (305)
T cd08270 144 GVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS----------ELSGAPVDLVVDSVGGPQ-LARALEL 211 (305)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc----------cccCCCceEEEECCCcHH-HHHHHHH
Confidence 999999999999999 9999999999999999999876654321 112237999999999876 8999999
Q ss_pred hccCCceEEEEccCCCCCccccCchhhcc---CcEEEEeeeCC-CCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHH
Q 025264 161 CHKGWGTSVIVGVAASGQEISTRPFQLVT---GRVWKGTAFGG-FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINE 236 (255)
Q Consensus 161 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~---~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (255)
++.+ |+++.+|... .....++...+.. +.++.++.... ....+.+..++++++++++.+. +.++++++++++
T Consensus 212 l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~ 287 (305)
T cd08270 212 LAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDE 287 (305)
T ss_pred hcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHH
Confidence 9996 9999998754 2233444444443 78888877553 1122467888999999997643 557899999999
Q ss_pred HHHHhhCCCee-EEEEec
Q 025264 237 AFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 237 a~~~~~~~~~~-k~vi~~ 253 (255)
|++.+.++... |+++.+
T Consensus 288 a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 288 AAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHcCCCCceEEEeC
Confidence 99999877766 998864
No 81
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.96 E-value=2.1e-27 Score=200.53 Aligned_cols=223 Identities=27% Similarity=0.343 Sum_probs=178.9
Q ss_pred cceeeEEEEcCC--ceEEcCCCCCcc---cccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCe
Q 025264 23 STFSQYTVVHDV--SVAKIDPQAPLD---KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASR 97 (255)
Q Consensus 23 g~~ae~~~v~~~--~~~~~p~~~~~~---~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~ 97 (255)
|+|+||++++.+ .++++|++++++ +++.++.+++|||+++ ...+++++++|+|.|+|++|++++|+++.+|+.+
T Consensus 125 g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~ 203 (375)
T cd08282 125 GGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASR 203 (375)
T ss_pred CeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 899999999976 899999999998 5677888899999988 7889999999999888999999999999999757
Q ss_pred EEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHH-----------HHHHHHHHhccCCc
Q 025264 98 VIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS-----------VMRAALECCHKGWG 166 (255)
Q Consensus 98 v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~-----------~~~~~~~~l~~~~G 166 (255)
|+++++++++.+.++++|+. .+++++ +++.+.+.+.+++++|+++||+|.+. .+...+++++++ |
T Consensus 204 vi~~~~~~~~~~~~~~~g~~-~v~~~~--~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g 279 (375)
T cd08282 204 VYVVDHVPERLDLAESIGAI-PIDFSD--GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-G 279 (375)
T ss_pred EEEECCCHHHHHHHHHcCCe-EeccCc--ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-c
Confidence 88998999999999999984 567776 77888888776667999999999762 378999999996 9
Q ss_pred eEEEEccCCCCC-----------ccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchH
Q 025264 167 TSVIVGVAASGQ-----------EISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEI 234 (255)
Q Consensus 167 ~~v~~g~~~~~~-----------~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (255)
+++.+|...... ...++...++. +..+.+... ...+.+.++++++.++++++...+.++|+++++
T Consensus 280 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~ 356 (375)
T cd08282 280 GIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDA 356 (375)
T ss_pred EEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHH
Confidence 999888643211 12233333333 555554432 123568889999999998765557789999999
Q ss_pred HHHHHHhhCCCeeEEEEec
Q 025264 235 NEAFRYMHGGDCLRCVLKM 253 (255)
Q Consensus 235 ~~a~~~~~~~~~~k~vi~~ 253 (255)
++|++.+.++...|+|+++
T Consensus 357 ~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 357 PEAYARFDKRLETKVVIKP 375 (375)
T ss_pred HHHHHHHhcCCceEEEeCC
Confidence 9999999887733999864
No 82
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.96 E-value=1.8e-27 Score=198.39 Aligned_cols=220 Identities=21% Similarity=0.318 Sum_probs=178.9
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIG 100 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~-g~~~v~~ 100 (255)
+|+++||+.++.++++++|+++++++++.++.++.|||+++ ....++++++|||+|+|++|++++++++.. |+ +|++
T Consensus 115 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~ 192 (338)
T PRK09422 115 DGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIA 192 (338)
T ss_pred cCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEE
Confidence 58999999999999999999999999999999999999987 778899999999999999999999999985 99 9999
Q ss_pred EcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 025264 101 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 180 (255)
Q Consensus 101 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 180 (255)
+++++++++.++++|++.++++++ ..++.+.+++.++ ++|.++++.++...++..+++++.+ |+++.+|.... ..
T Consensus 193 ~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~ 267 (338)
T PRK09422 193 VDINDDKLALAKEVGADLTINSKR-VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SM 267 (338)
T ss_pred EeCChHHHHHHHHcCCcEEecccc-cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--Cc
Confidence 999999999999999998888752 1456677777765 6885555555555599999999997 99999987532 23
Q ss_pred ccCchhhc-cCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEecC
Q 025264 181 STRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 254 (255)
Q Consensus 181 ~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~~ 254 (255)
+++...+. ++.++.++... ..++++.++++++++.+.+ .+ ..++++++++|++.+.+++.. |+++.+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 268 DLSIPRLVLDGIEVVGSLVG---TRQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred eecHHHHhhcCcEEEEecCC---CHHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 34433333 37777665432 2357888999999998643 34 468999999999999888766 9998764
No 83
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.96 E-value=2.4e-27 Score=197.81 Aligned_cols=240 Identities=20% Similarity=0.311 Sum_probs=189.8
Q ss_pred CCCCCccccCCcccccc---------------------------cCccceeeEEEEcCCceEEcCCCCCcccccccccch
Q 025264 3 NDRKSRFSINGKPIYHF---------------------------MGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 55 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~---------------------------~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 55 (255)
|+++..+++ |++|++. ..+|+|+||+.++.+.++++|+++++++++.+ .++
T Consensus 73 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~ 150 (341)
T PRK05396 73 GSEVTGFKV-GDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPF 150 (341)
T ss_pred CCCCCcCCC-CCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHH
Confidence 567777888 8888754 13589999999999999999999999888754 466
Q ss_pred hhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHh
Q 025264 56 PTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 135 (255)
Q Consensus 56 ~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~ 135 (255)
.++++++.. ...++++|+|+|+|++|++++|+++++|+.+|+++++++++.++++++|+++++++++ .++.+.+++
T Consensus 151 ~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~~ 226 (341)
T PRK05396 151 GNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAE 226 (341)
T ss_pred HHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHHH
Confidence 677665533 3468999999988999999999999999855888888888999999999999999887 788888888
Q ss_pred hcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhc-cCcEEEEeeeCCCCccCcHHHHHHH
Q 025264 136 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDK 213 (255)
Q Consensus 136 ~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~ 213 (255)
.+.+ ++|++|||.|+...+..++++++++ |+++.+|..... .+++...+. ++.++.++.... ..+.+..++++
T Consensus 227 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~ 301 (341)
T PRK05396 227 LGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGD--MAIDWNKVIFKGLTIKGIYGRE--MFETWYKMSAL 301 (341)
T ss_pred hcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--CcccHHHHhhcceEEEEEEccC--ccchHHHHHHH
Confidence 8776 8999999999877789999999997 999999875422 233333333 377777765221 12456678888
Q ss_pred HHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEecC
Q 025264 214 YMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 254 (255)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~~ 254 (255)
++++ +.+.+.+.++|+++++++|++.+.++...|++++++
T Consensus 302 ~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 302 LQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred HHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 8888 445555678999999999999988776449999764
No 84
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.96 E-value=3e-27 Score=197.21 Aligned_cols=241 Identities=25% Similarity=0.379 Sum_probs=189.2
Q ss_pred CCCCCccccCCccccccc---------------------------CccceeeEEEEcCCceEEcCCCCCcccccccccch
Q 025264 3 NDRKSRFSINGKPIYHFM---------------------------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 55 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~---------------------------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 55 (255)
|+++..+++ ||+|+++. ..|+|++|++++.+.++++|++++.+.+ +++.++
T Consensus 73 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~ 150 (341)
T cd05281 73 GEGVTRVKV-GDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPL 150 (341)
T ss_pred CCCCCCCCC-CCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHH
Confidence 455666778 99997641 3589999999999999999999988555 555678
Q ss_pred hhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHh
Q 025264 56 PTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 135 (255)
Q Consensus 56 ~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~ 135 (255)
.++++++. ...+++++|||+|+|++|++++|+++..|+.+|+++++++++.+.++++|+++++++++ .++. .+.+
T Consensus 151 ~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~-~~~~ 225 (341)
T cd05281 151 GNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE--EDVV-EVKS 225 (341)
T ss_pred HHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccc--ccHH-HHHH
Confidence 88888764 45679999999988999999999999999856888888888998889999998888776 6777 7888
Q ss_pred hcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhccCcEEEEeeeCCCCccCcHHHHHHHH
Q 025264 136 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKY 214 (255)
Q Consensus 136 ~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 214 (255)
.+++ ++|++|||+|+......++++++++ |+++.+|........++....+.++..+.++.... ..+.+.++++++
T Consensus 226 ~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 302 (341)
T cd05281 226 VTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK--MFETWYQVSALL 302 (341)
T ss_pred HcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecCC--cchhHHHHHHHH
Confidence 7777 9999999999877689999999997 99999987543211121122333477777665221 225678899999
Q ss_pred HcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEEEec
Q 025264 215 MKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 253 (255)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~~ 253 (255)
.++.+.+.+.+.++++++++++|++.+.++...|+++++
T Consensus 303 ~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~ 341 (341)
T cd05281 303 KSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP 341 (341)
T ss_pred HcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence 999987655566789999999999999887733999864
No 85
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.96 E-value=1.3e-27 Score=198.52 Aligned_cols=241 Identities=20% Similarity=0.266 Sum_probs=192.2
Q ss_pred CCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-Ch
Q 025264 3 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GT 81 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 81 (255)
|.++..+++ ||+|++.. .|+|++|++++...++++|+. +.+++.++.++.|||+++.+..+++++++|+|+|+ |.
T Consensus 76 G~~v~~~~~-Gd~V~~~~-~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ 151 (329)
T cd08250 76 GEGVTDFKV-GDAVATMS-FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGG 151 (329)
T ss_pred CCCCCCCCC-CCEEEEec-CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccH
Confidence 556667888 99998763 589999999999999999997 35677888899999999888889999999999996 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHh
Q 025264 82 VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC 161 (255)
Q Consensus 82 vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l 161 (255)
+|++++++++..|+ +|+++++++++.+.++++|++.+++..+ .++.+.+....++++|+++|++|+.. +...++++
T Consensus 152 ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~~~~vd~v~~~~g~~~-~~~~~~~l 227 (329)
T cd08250 152 TGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKT--EDLGEVLKKEYPKGVDVVYESVGGEM-FDTCVDNL 227 (329)
T ss_pred HHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCC--ccHHHHHHHhcCCCCeEEEECCcHHH-HHHHHHHh
Confidence 99999999999999 8999999999999999999988888776 66777776654448999999999865 89999999
Q ss_pred ccCCceEEEEccCCCC---------CccccCchhhccCcEEEEeeeCCCC--ccCcHHHHHHHHHcCCCCCCCcceeeee
Q 025264 162 HKGWGTSVIVGVAASG---------QEISTRPFQLVTGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMT 230 (255)
Q Consensus 162 ~~~~G~~v~~g~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
+++ |+++.+|..... ....++...+.++.++.++....+. ..+.+.++++++.++.+.+......+|+
T Consensus 228 ~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 306 (329)
T cd08250 228 ALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRG 306 (329)
T ss_pred ccC-CeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccC
Confidence 996 999999875321 0112222334448888887654321 1245678889999998765433445689
Q ss_pred cchHHHHHHHhhCCCee-EEEEe
Q 025264 231 LGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 231 ~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
++++++|++.+.+++.. |++++
T Consensus 307 ~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 307 LESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHHHcCCCCceEEeC
Confidence 99999999999877766 88864
No 86
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.96 E-value=2.8e-27 Score=197.26 Aligned_cols=235 Identities=23% Similarity=0.294 Sum_probs=186.3
Q ss_pred CCCCCccccCCcccccc--------------------------------cCccceeeEEEEcCCceEEcCCCCCcccccc
Q 025264 3 NDRKSRFSINGKPIYHF--------------------------------MGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL 50 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~--------------------------------~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~ 50 (255)
|.++..|++ ||+|+.. ..+|+|+||++++.+.++++|++++.++++.
T Consensus 69 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~ 147 (339)
T cd08232 69 GPGVTGLAP-GQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL 147 (339)
T ss_pred CCCCCcCCC-CCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh
Confidence 556777888 9998751 1258999999999999999999999998876
Q ss_pred cccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHH
Q 025264 51 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQ 130 (255)
Q Consensus 51 ~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 130 (255)
..++++||+++.....+ ++++|||.|+|.+|++++|+|+.+|+.+++++++++++.+.++++|+++++++++ .++
T Consensus 148 -~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~~~- 222 (339)
T cd08232 148 -AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--DPL- 222 (339)
T ss_pred -cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--hhh-
Confidence 56888999987665556 9999999988999999999999999856889988888888889999999998775 442
Q ss_pred HHHHhhc-CC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhc-cCcEEEEeeeCCCCccCcH
Q 025264 131 QVLVDLT-DG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQV 207 (255)
Q Consensus 131 ~~i~~~~-~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~ 207 (255)
.+.. .. ++|+++|+.|....++..+++++++ |+++.+|... .....+...++ ++.++.++.. ..+.+
T Consensus 223 ---~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 292 (339)
T cd08232 223 ---AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSFR----FDDEF 292 (339)
T ss_pred ---hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEec----CHHHH
Confidence 2222 22 6999999999765589999999997 9999998643 22333333333 3777776642 22568
Q ss_pred HHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 208 PWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
++++++++++.+.+.+.+.++|+++++++|++.+.++... |+|+++
T Consensus 293 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 293 AEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 8899999999887666567899999999999999877655 999874
No 87
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.96 E-value=2.2e-27 Score=197.70 Aligned_cols=215 Identities=27% Similarity=0.388 Sum_probs=178.8
Q ss_pred CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEE
Q 025264 21 GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 100 (255)
Q Consensus 21 ~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~ 100 (255)
..|+|+||++++.+.++++|+++++++++.+++.+.|||+++.. ..++++++++|.|+|++|++++++++..|+ +|++
T Consensus 121 ~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~ 198 (337)
T cd05283 121 TQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKR-NGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTA 198 (337)
T ss_pred CCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEE
Confidence 35899999999999999999999999999999999999998744 568999999998889999999999999999 9999
Q ss_pred EcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 025264 101 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 180 (255)
Q Consensus 101 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 180 (255)
+++++++.++++++|++.+++.++ .++.+.. ++++|++|||++.+..+..++++++++ |+++.+|..... .
T Consensus 199 ~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~----~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~ 269 (337)
T cd05283 199 FSRSPSKKEDALKLGADEFIATKD--PEAMKKA----AGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEP--L 269 (337)
T ss_pred EcCCHHHHHHHHHcCCcEEecCcc--hhhhhhc----cCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCC--C
Confidence 999999999999999998888765 4333221 238999999999875589999999996 999999875432 2
Q ss_pred ccCchhhc-cCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEe
Q 025264 181 STRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 181 ~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
.++...++ ++.++.++.... .++++.++++++++++++ .+ ++|+++++++||+.+.+++.. |+|++
T Consensus 270 ~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 270 PVPPFPLIFGRKSVAGSLIGG---RKETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred ccCHHHHhcCceEEEEecccC---HHHHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 44444533 488998887553 267899999999998654 34 689999999999999888866 98874
No 88
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.96 E-value=4.5e-27 Score=197.84 Aligned_cols=222 Identities=24% Similarity=0.389 Sum_probs=175.2
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
+|+|+||++++...++++|++++++++++.. ++.++++++ ...++.++++|+|+|+|++|++++++++..|+..++++
T Consensus 135 ~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~ 212 (364)
T PLN02702 135 HGSLANQVVHPADLCFKLPENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIV 212 (364)
T ss_pred CCcccceEEcchHHeEECCCCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 5899999999999999999999999887532 455688876 77889999999999889999999999999999557888
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhh---cCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCC
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL---TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 178 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~---~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 178 (255)
++++++.+.++++|++.++++...+.++.+.+.+. +++++|++||++|....+..++++++++ |+++.+|....
T Consensus 213 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-- 289 (364)
T PLN02702 213 DVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN-- 289 (364)
T ss_pred CCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--
Confidence 88888999899999988765432125676666554 2338999999999766699999999996 99999987532
Q ss_pred ccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeec--chHHHHHHHhhCCCee-EEEEe
Q 025264 179 EISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTL--GEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 179 ~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
........... ++++.+++.. ...++.++++++++.+.+.+.+.++|++ +++++|++.+.+++.. |+++.
T Consensus 290 ~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 290 EMTVPLTPAAAREVDVVGVFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred CCcccHHHHHhCccEEEEeccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 22333333433 8888876532 2467889999999998765566778665 7999999998877655 99985
No 89
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.96 E-value=3e-27 Score=197.07 Aligned_cols=237 Identities=22% Similarity=0.325 Sum_probs=188.8
Q ss_pred CCCCCCccccCCcccccccC--------ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCC-----
Q 025264 2 MNDRKSRFSINGKPIYHFMG--------TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKV----- 68 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~~--------~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----- 68 (255)
.|+++..+++ ||+|+++.. +|+|++|++++...++++|+++++++++.+++++.|||+++.+..++
T Consensus 69 vG~~v~~~~~-Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~ 147 (339)
T cd08249 69 VGSGVTRFKV-GDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPP 147 (339)
T ss_pred eCCCcCcCCC-CCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCC
Confidence 3667778888 999997643 58999999999999999999999999999999999999998766554
Q ss_pred -----CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCcc
Q 025264 69 -----EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVD 142 (255)
Q Consensus 69 -----~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d 142 (255)
+++++|+|+|+ |++|++++++++..|+ +|++++ ++++.+.++++|+++++++++ .++.+.+++.+++++|
T Consensus 148 ~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~~~~~d 223 (339)
T cd08249 148 KPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHD--PDVVEDIRAATGGKLR 223 (339)
T ss_pred CCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCC--chHHHHHHHhcCCCee
Confidence 78999999997 9999999999999999 999888 568999999999999998887 7888888877766899
Q ss_pred EEEecCCcHHHHHHHHHHhcc--CCceEEEEccCCCCCccccCchhhccCcEEEEe---eeCC------CCccCcHHHHH
Q 025264 143 YSFECIGNVSVMRAALECCHK--GWGTSVIVGVAASGQEISTRPFQLVTGRVWKGT---AFGG------FKSRSQVPWLV 211 (255)
Q Consensus 143 ~v~d~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~---~~~~------~~~~~~~~~~~ 211 (255)
+++|++|.+..+...++++++ + |+++.+|...... .+. .+..+... .+.. ......+.+++
T Consensus 224 ~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (339)
T cd08249 224 YALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EPR-----KGVKVKFVLGYTVFGEIPEDREFGEVFWKYLP 295 (339)
T ss_pred EEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cCC-----CCceEEEEEeeeecccccccccchHHHHHHHH
Confidence 999999984559999999999 8 9999998754221 111 11222221 1110 11123467788
Q ss_pred HHHHcCCCCCCCcceeeee--cchHHHHHHHhhCCC-ee-EEEEec
Q 025264 212 DKYMKKEIKVDEYVTHNMT--LGEINEAFRYMHGGD-CL-RCVLKM 253 (255)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~~~~~-~~-k~vi~~ 253 (255)
++++++.+.+. ...+++ ++++++|++.+..++ .. |+|+++
T Consensus 296 ~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 296 ELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 99999987764 334677 999999999998877 66 999874
No 90
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.96 E-value=2.7e-27 Score=196.27 Aligned_cols=238 Identities=18% Similarity=0.233 Sum_probs=181.8
Q ss_pred CCccccCCccccccc------CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhc--C-CCCCCEEEE
Q 025264 6 KSRFSINGKPIYHFM------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA--K-VEPGSIVAV 76 (255)
Q Consensus 6 ~~~~~~~g~~v~~~~------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~--~-~~~~~~vlI 76 (255)
+..+++ ||+|++.. ..|+|+||++++++.++++|+++++++++.+++++.||++++.... . ..++++|||
T Consensus 74 ~~~~~~-Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (326)
T cd08289 74 DPRFKP-GDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLV 152 (326)
T ss_pred CCCCCC-CCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence 345777 99998653 3699999999999999999999999999999999999998875432 3 345789999
Q ss_pred EcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHH
Q 025264 77 FGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMR 155 (255)
Q Consensus 77 ~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~ 155 (255)
+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++.+++.++ . ..+.+.+.+++++|+++|++|+.. +.
T Consensus 153 ~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~-~~~~~~~~~~~~~d~vld~~g~~~-~~ 227 (326)
T cd08289 153 TGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE--L-QEESIKPLEKQRWAGAVDPVGGKT-LA 227 (326)
T ss_pred EcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh--H-HHHHHHhhccCCcCEEEECCcHHH-HH
Confidence 998 9999999999999999 9999999999999999999988988764 3 345566664348999999999865 99
Q ss_pred HHHHHhccCCceEEEEccCCCCCccccCchhh-ccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCC---CCCcceeeeec
Q 025264 156 AALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIK---VDEYVTHNMTL 231 (255)
Q Consensus 156 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 231 (255)
..+++++++ |+++.+|.... ...+++...+ .++.++.++...... ......++..+.+ .+. ....+.++|++
T Consensus 228 ~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 303 (326)
T cd08289 228 YLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGIDSVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITL 303 (326)
T ss_pred HHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEEeEecC-chHHHHHHHHHHh-hcCccccccccceEeeH
Confidence 999999996 99999997532 2333334445 448888887532211 1123334333322 221 11234689999
Q ss_pred chHHHHHHHhhCCCee-EEEEec
Q 025264 232 GEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 232 ~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
+++++|++.+.+++.. |+++++
T Consensus 304 ~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 304 DELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred HHHHHHHHHHhcCcccceEEEeC
Confidence 9999999999888776 988863
No 91
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.96 E-value=6.7e-27 Score=192.77 Aligned_cols=242 Identities=22% Similarity=0.286 Sum_probs=197.9
Q ss_pred CCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-Ch
Q 025264 3 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GT 81 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 81 (255)
|+++.+++. ||+|+++...|++++|+.++.+.++++|++++.++++.++..+.++++++....+++++++|+|+|+ |+
T Consensus 70 g~~~~~~~~-G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~ 148 (320)
T cd05286 70 GPGVTGFKV-GDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGG 148 (320)
T ss_pred CCCCCCCCC-CCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCch
Confidence 556677888 9999876436899999999999999999999999999999999999999888899999999999996 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHH
Q 025264 82 VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 160 (255)
Q Consensus 82 vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~ 160 (255)
+|++++++++.+|+ +|+++++++++.+.++++|++.+++..+ .++.+.+...+.+ ++|++++|+++.. ....+++
T Consensus 149 ~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~ 224 (320)
T cd05286 149 VGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRD--EDFVERVREITGGRGVDVVYDGVGKDT-FEGSLDS 224 (320)
T ss_pred HHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCc--hhHHHHHHHHcCCCCeeEEEECCCcHh-HHHHHHh
Confidence 99999999999999 9999999999999999999988888776 7788888888777 8999999999865 8999999
Q ss_pred hccCCceEEEEccCCCCCccccCchhh-ccCcEEEEeeeCCCC-cc----CcHHHHHHHHHcCCCCCCCcceeeeecchH
Q 025264 161 CHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFK-SR----SQVPWLVDKYMKKEIKVDEYVTHNMTLGEI 234 (255)
Q Consensus 161 l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (255)
++++ |+++.+|..... ...++...+ .++.++.+.....+. .. +.+.++++++.++.+.+. ..+.|+++++
T Consensus 225 l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~ 300 (320)
T cd05286 225 LRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADA 300 (320)
T ss_pred hccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHH
Confidence 9996 999999875322 222333334 347777655433222 11 234567888888886543 4578999999
Q ss_pred HHHHHHhhCCCee-EEEEec
Q 025264 235 NEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 235 ~~a~~~~~~~~~~-k~vi~~ 253 (255)
++|++.+.++... |+++++
T Consensus 301 ~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 301 AQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred HHHHHHHHcCCCCceEEEeC
Confidence 9999999887766 888764
No 92
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=6.5e-27 Score=194.61 Aligned_cols=239 Identities=24% Similarity=0.415 Sum_probs=197.7
Q ss_pred CCCCCccccCCccccccc---------------------CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhH
Q 025264 3 NDRKSRFSINGKPIYHFM---------------------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 61 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~---------------------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~ 61 (255)
|.++..+++ ||+|++.. .+|+|++|+.++.+.++++|+++++.+++.+++++.+||++
T Consensus 73 G~~~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~ 151 (336)
T cd08276 73 GEGVTRFKV-GDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNA 151 (336)
T ss_pred CCCCcCCCC-CCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHH
Confidence 456667788 99888653 15889999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-C
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-G 140 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~ 140 (255)
+.....++++++|+|+|+|++|++++++++..|+ +|+++++++++.+.++++|++.+++... +.++.+.+.+.+++ +
T Consensus 152 l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~ 229 (336)
T cd08276 152 LFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVLKLTGGRG 229 (336)
T ss_pred HHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHHHHcCCCC
Confidence 8888899999999999889999999999999999 8999999999999998899988887653 14577788888877 9
Q ss_pred ccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchh-hccCcEEEEeeeCCCCccCcHHHHHHHHHcCCC
Q 025264 141 VDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEI 219 (255)
Q Consensus 141 ~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (255)
+|+++|+++... +..++++++++ |+++.+|...... ....... +.++.++.++..+. ...+.+++++++++.+
T Consensus 230 ~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l 303 (336)
T cd08276 230 VDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLSGFE-APVLLLPLLTKGATLRGIAVGS---RAQFEAMNRAIEAHRI 303 (336)
T ss_pred CcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCCCCc-cCcCHHHHhhcceEEEEEecCc---HHHHHHHHHHHHcCCc
Confidence 999999998766 89999999996 9999998764322 1233333 34488888887553 3578889999988876
Q ss_pred CCCCcceeeeecchHHHHHHHhhCCCee-EEEEe
Q 025264 220 KVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 220 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
.+. ...+|++++++++++.+.+++.. |++++
T Consensus 304 ~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 304 RPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred ccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 543 45789999999999998877766 88875
No 93
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.96 E-value=6.1e-27 Score=194.82 Aligned_cols=237 Identities=26% Similarity=0.409 Sum_probs=189.5
Q ss_pred CCCCCCccccCCcccccc---------------------------cCccceeeEEEEcCCceEEcCCCCCcccccccccc
Q 025264 2 MNDRKSRFSINGKPIYHF---------------------------MGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 54 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~---------------------------~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~ 54 (255)
.|.++.++++ ||+|++. ...|+|++|++++.++++++|+++++.+++.+ .+
T Consensus 67 vG~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~ 144 (334)
T cd08234 67 VGSKVTGFKV-GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EP 144 (334)
T ss_pred eCCCCCCCCC-CCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hH
Confidence 3566777888 9998751 13589999999999999999999999988766 67
Q ss_pred hhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHH
Q 025264 55 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 134 (255)
Q Consensus 55 ~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~ 134 (255)
+.++++++ ...+++++++|+|+|+|.+|.+++++|+..|+.+|+++++++++.+.++++|++.++++.+ .++.+.
T Consensus 145 ~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-- 219 (334)
T cd08234 145 LSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--EDPEAQ-- 219 (334)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC--CCHHHH--
Confidence 88999987 7889999999999988999999999999999933888999999999999999988888776 555544
Q ss_pred hhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhc-cCcEEEEeeeCCCCccCcHHHHHH
Q 025264 135 DLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVD 212 (255)
Q Consensus 135 ~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~ 212 (255)
..+.+ ++|+++||++....+...+++++++ |+++.+|........+++...+. ++.++.+.... ...++++++
T Consensus 220 ~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 294 (334)
T cd08234 220 KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PYTFPRAIA 294 (334)
T ss_pred HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HHHHHHHHH
Confidence 33444 8999999998766689999999996 99999987543223344444433 37777776532 246888999
Q ss_pred HHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEE
Q 025264 213 KYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 251 (255)
+++++.+.+.+.+..+|+++++++|++.+.+ +.. |+|+
T Consensus 295 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 295 LLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 9999987665556678999999999999987 544 8876
No 94
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.96 E-value=3.4e-27 Score=194.92 Aligned_cols=233 Identities=23% Similarity=0.354 Sum_probs=187.9
Q ss_pred ccccCCccccccc------CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-C
Q 025264 8 RFSINGKPIYHFM------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-G 80 (255)
Q Consensus 8 ~~~~~g~~v~~~~------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 80 (255)
.+++ ||+|+++. .+|+|++|+.+++..++++|+++++++++.+++++.|||+++.+...++++++|+|+|+ |
T Consensus 75 ~~~~-Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g 153 (320)
T cd08243 75 TFTP-GQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTS 153 (320)
T ss_pred CCCC-CCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCC
Confidence 4677 99998764 24899999999999999999999999999999999999999888888999999999997 9
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHH
Q 025264 81 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALEC 160 (255)
Q Consensus 81 ~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~ 160 (255)
++|++++|+|+.+|+ +|+++++++++.+.++++|++++++. . .++.+.+.+. ++++|+++|++|+.. +...+++
T Consensus 154 ~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~--~~~~~~i~~~-~~~~d~vl~~~~~~~-~~~~~~~ 227 (320)
T cd08243 154 SVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-D--GAIAEQLRAA-PGGFDKVLELVGTAT-LKDSLRH 227 (320)
T ss_pred hHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-C--ccHHHHHHHh-CCCceEEEECCChHH-HHHHHHH
Confidence 999999999999999 89999999999999999999888754 3 5677778777 448999999999865 9999999
Q ss_pred hccCCceEEEEccCCCCCcc----ccCchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHH
Q 025264 161 CHKGWGTSVIVGVAASGQEI----STRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINE 236 (255)
Q Consensus 161 l~~~~G~~v~~g~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (255)
++++ |+++.+|........ ......+.++.++.++...... ...+++++++++++.+.+. ..++|+++++++
T Consensus 228 l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~ 303 (320)
T cd08243 228 LRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-QTPLQELFDFVAAGHLDIP--PSKVFTFDEIVE 303 (320)
T ss_pred hccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh-HHHHHHHHHHHHCCceecc--cccEEcHHHHHH
Confidence 9996 999999875322111 1111112346666666533221 2357788899999986543 457899999999
Q ss_pred HHHHhhCCCee-EEEE
Q 025264 237 AFRYMHGGDCL-RCVL 251 (255)
Q Consensus 237 a~~~~~~~~~~-k~vi 251 (255)
|++.+.++... |+++
T Consensus 304 a~~~~~~~~~~~kvvv 319 (320)
T cd08243 304 AHAYMESNRAFGKVVV 319 (320)
T ss_pred HHHHHHhCCCCCcEEe
Confidence 99999877665 7775
No 95
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.96 E-value=1.2e-26 Score=192.36 Aligned_cols=236 Identities=19% Similarity=0.212 Sum_probs=180.9
Q ss_pred CCccccCCccccccc------CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcC--CC-CCCEEEE
Q 025264 6 KSRFSINGKPIYHFM------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK--VE-PGSIVAV 76 (255)
Q Consensus 6 ~~~~~~~g~~v~~~~------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~--~~-~~~~vlI 76 (255)
+..+++ ||+|++.. .+|+|++|+++++++++++|+++++++++.+++.+.|||+++....+ ++ ++++|+|
T Consensus 74 ~~~~~~-Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (325)
T cd05280 74 DPRFRE-GDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV 152 (325)
T ss_pred CCCCCC-CCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEE
Confidence 345677 99998642 36899999999999999999999999999999999999998755443 35 4579999
Q ss_pred EcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHH
Q 025264 77 FGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVM 154 (255)
Q Consensus 77 ~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~ 154 (255)
+|+ |++|++++++|+.+|+ +|+++++++++++.++++|+++++++++ . ...+.+...+ ++|+++|+++++. +
T Consensus 153 ~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~--~~~~~~~~~~~~~d~vi~~~~~~~-~ 226 (325)
T cd05280 153 TGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDRED--L--LDESKKPLLKARWAGAIDTVGGDV-L 226 (325)
T ss_pred ECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchh--H--HHHHHHHhcCCCccEEEECCchHH-H
Confidence 998 9999999999999999 8999999999999999999998888654 2 2223333333 8999999999876 9
Q ss_pred HHHHHHhccCCceEEEEccCCCCCccccCchhh-ccCcEEEEeeeCCCCc---cCcHHHHHHHHHcCCCCCCCcceeeee
Q 025264 155 RAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMT 230 (255)
Q Consensus 155 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
...+++++++ |+++.+|..... ..+++...+ .++.++.++....... ...++.+.+++..+.. . .+..+|+
T Consensus 227 ~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~ 301 (325)
T cd05280 227 ANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLL--E-IVVREIS 301 (325)
T ss_pred HHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCc--c-ceeeEec
Confidence 9999999996 999999876432 224444445 3588888876543321 0122334444445532 1 2567999
Q ss_pred cchHHHHHHHhhCCCee-EEEEec
Q 025264 231 LGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 231 ~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
++++++|++.+.+++.. |+|+++
T Consensus 302 ~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 302 LEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHHHHHHHHHHhcCCcceEEEEeC
Confidence 99999999999888766 998864
No 96
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.95 E-value=1e-26 Score=190.51 Aligned_cols=241 Identities=18% Similarity=0.304 Sum_probs=193.1
Q ss_pred CCCCCCccccCCccccccc--CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC
Q 025264 2 MNDRKSRFSINGKPIYHFM--GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL 79 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~--~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~ 79 (255)
.|+++.++++ ||+|+++. ..|+|++|++++.+.++++|+++++++++.++.++.+||+++ +...++++++++|+|+
T Consensus 52 ~G~~v~~~~~-Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~ 129 (303)
T cd08251 52 VGPHVTRLAV-GDEVIAGTGESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTA 129 (303)
T ss_pred ECCCCCCCCC-CCEEEEecCCCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecC
Confidence 3566777888 99998763 358999999999999999999999999999999999999987 5789999999999976
Q ss_pred -ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHH
Q 025264 80 -GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAA 157 (255)
Q Consensus 80 -g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~ 157 (255)
|++|++++|+++.+|+ +|+++++++++.+.++++|++.+++..+ .++.+.+...+++ ++|+++|++++.. ....
T Consensus 130 ~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~~~d~v~~~~~~~~-~~~~ 205 (303)
T cd08251 130 TGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTGGRGVDVVINTLSGEA-IQKG 205 (303)
T ss_pred CcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHcCCCCceEEEECCcHHH-HHHH
Confidence 9999999999999999 9999999999999999999999998876 7788888888877 8999999998765 8899
Q ss_pred HHHhccCCceEEEEccCCCCCccccCchhhccCcEEEEeeeCCCC------ccCcHHHHHHHHHcCCCCCCCcceeeeec
Q 025264 158 LECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK------SRSQVPWLVDKYMKKEIKVDEYVTHNMTL 231 (255)
Q Consensus 158 ~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (255)
+++++++ |+++.+|.........++...+.++..+....+.... ..+.+.+++++++++.+.+ ...+.|++
T Consensus 206 ~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~ 282 (303)
T cd08251 206 LNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRP--TVSRIFPF 282 (303)
T ss_pred HHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccC--CCceEEcH
Confidence 9999996 9999998754222223333334334444433322111 1134667888888888653 35578999
Q ss_pred chHHHHHHHhhCCCee-EEEE
Q 025264 232 GEINEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 232 ~~~~~a~~~~~~~~~~-k~vi 251 (255)
++++++++.+.+++.. |+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 283 DDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHHHHHhCCCcceEeC
Confidence 9999999999877665 7764
No 97
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.95 E-value=1.7e-26 Score=190.95 Aligned_cols=217 Identities=22% Similarity=0.297 Sum_probs=174.3
Q ss_pred cccccc-cCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHH
Q 025264 14 KPIYHF-MGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA 92 (255)
Q Consensus 14 ~~v~~~-~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~ 92 (255)
+++.++ ..+|+|++|++++.++++++|++++.++++.+ .++.+++. +.+..+++++++|||+|+|.+|++++|+|+.
T Consensus 100 ~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~ 177 (319)
T cd08242 100 RTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLAL 177 (319)
T ss_pred CcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 334444 23689999999999999999999999888764 35556665 4588899999999999889999999999999
Q ss_pred cCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEE
Q 025264 93 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 93 ~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
+|+ +|+++++++++.+.++++|++.++++.+ . +.+ ++|+++||+|+...++..+++++++ |+++..
T Consensus 178 ~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~ 244 (319)
T cd08242 178 TGP-DVVLVGRHSEKLALARRLGVETVLPDEA--E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLK 244 (319)
T ss_pred cCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc--c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEE
Confidence 999 8999999999999999999988877653 2 234 8999999999866689999999996 999987
Q ss_pred ccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCeeEEE
Q 025264 172 GVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCV 250 (255)
Q Consensus 172 g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~v 250 (255)
+.... ...++...+.. +.++.+...+ .+++++++++++++++.+.+.++|+++++++|++.+.++..+|++
T Consensus 245 ~~~~~--~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~v 316 (319)
T cd08242 245 STYAG--PASFDLTKAVVNEITLVGSRCG------PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVL 316 (319)
T ss_pred cccCC--CCccCHHHheecceEEEEEecc------cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEE
Confidence 76432 23444444433 7777776432 388899999999986666677899999999999999866656999
Q ss_pred Eec
Q 025264 251 LKM 253 (255)
Q Consensus 251 i~~ 253 (255)
|++
T Consensus 317 i~~ 319 (319)
T cd08242 317 LRP 319 (319)
T ss_pred eCC
Confidence 864
No 98
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.95 E-value=1.9e-26 Score=190.98 Aligned_cols=236 Identities=19% Similarity=0.217 Sum_probs=184.0
Q ss_pred CCCccccCCccccccc------CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhh--cCCCCCC-EEE
Q 025264 5 RKSRFSINGKPIYHFM------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT--AKVEPGS-IVA 75 (255)
Q Consensus 5 ~~~~~~~~g~~v~~~~------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~-~vl 75 (255)
++..|++ ||+|++.. ..|++++|+.++.+.++++|+++++++++.+++.+.+|+.++... ..+.+++ +|+
T Consensus 72 ~~~~~~~-Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vl 150 (323)
T TIGR02823 72 EDPRFRE-GDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVL 150 (323)
T ss_pred CCCCCCC-CCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEE
Confidence 3456778 99998653 368999999999999999999999999999999999998876433 3488998 999
Q ss_pred EEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHH
Q 025264 76 VFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVM 154 (255)
Q Consensus 76 I~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~ 154 (255)
|+|+ |++|++++++|+.+|+ +++++++++++++.++++|++.+++.++ ... .++..+.+++|+++||+|+.. +
T Consensus 151 I~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~--~~~~~~~~~~d~vld~~g~~~-~ 224 (323)
T TIGR02823 151 VTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDRED--LSP--PGKPLEKERWAGAVDTVGGHT-L 224 (323)
T ss_pred EEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc--HHH--HHHHhcCCCceEEEECccHHH-H
Confidence 9997 9999999999999999 8999888889999999999988888654 333 344444447999999999876 8
Q ss_pred HHHHHHhccCCceEEEEccCCCCCccccCchhh-ccCcEEEEeeeCCCCc---cCcHHHHHHHHHcCCCCCCCcceeeee
Q 025264 155 RAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMT 230 (255)
Q Consensus 155 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
...+++++++ |+++.+|.... ...+++...+ .++.++.++....... .+.+..+.+++..+.+.. . ...|+
T Consensus 225 ~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~ 299 (323)
T TIGR02823 225 ANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLES--I-TREIT 299 (323)
T ss_pred HHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcC--c-eeeec
Confidence 9999999997 99999997632 2333433444 4488888876442211 112445556666776543 2 46899
Q ss_pred cchHHHHHHHhhCCCee-EEEEe
Q 025264 231 LGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 231 ~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
++++++|++.+.+++.. |++++
T Consensus 300 l~~~~~a~~~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 300 LEELPEALEQILAGQHRGRTVVD 322 (323)
T ss_pred HHHHHHHHHHHhCCCccceEEEe
Confidence 99999999999888766 98875
No 99
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.95 E-value=1.1e-26 Score=188.76 Aligned_cols=241 Identities=19% Similarity=0.327 Sum_probs=193.8
Q ss_pred CCCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-C
Q 025264 2 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-G 80 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 80 (255)
.|+++..+++ ||+|+++. .|+|+||+.++.+.++++|+++++++++.+++++.++|+++.+...+.++++|+|+|+ |
T Consensus 38 ~G~~~~~~~~-Gd~V~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~ 115 (288)
T smart00829 38 VGPGVTGLAV-GDRVMGLA-PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAG 115 (288)
T ss_pred eCCCCcCCCC-CCEEEEEc-CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCc
Confidence 3566777888 99998763 5899999999999999999999999999999999999998878889999999999986 9
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC--cEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHH
Q 025264 81 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAA 157 (255)
Q Consensus 81 ~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~ 157 (255)
.+|++++++++..|+ +|+++++++++.+.++++|+ +.++++.+ .++.+.+.+.+++ ++|+++|++++.. +...
T Consensus 116 ~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~ 191 (288)
T smart00829 116 GVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD--LSFADEILRATGGRGVDVVLNSLAGEF-LDAS 191 (288)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC--ccHHHHHHHHhCCCCcEEEEeCCCHHH-HHHH
Confidence 999999999999999 99999999999999999998 77888776 7788888887776 8999999999755 8899
Q ss_pred HHHhccCCceEEEEccCCCCCccccCchhhccCcEEEEeeeCCCC-----ccCcHHHHHHHHHcCCCCCCCcceeeeecc
Q 025264 158 LECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK-----SRSQVPWLVDKYMKKEIKVDEYVTHNMTLG 232 (255)
Q Consensus 158 ~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (255)
+++++++ |+++.+|.........++...+.++.++.+..+.... ....+.++++++.++.+.+. ..+.|+++
T Consensus 192 ~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 268 (288)
T smart00829 192 LRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPIS 268 (288)
T ss_pred HHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHH
Confidence 9999996 9999998753222223333334446666665543211 11246678888888886543 34689999
Q ss_pred hHHHHHHHhhCCCee-EEEE
Q 025264 233 EINEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 233 ~~~~a~~~~~~~~~~-k~vi 251 (255)
+++++++.+..+... |+++
T Consensus 269 ~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 269 DVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred HHHHHHHHHhcCCCcceEeC
Confidence 999999999877655 7663
No 100
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.95 E-value=1.2e-26 Score=179.84 Aligned_cols=241 Identities=20% Similarity=0.271 Sum_probs=192.4
Q ss_pred CCCCccccCCcccccccCccceeeEEEEcCCc--eEEcCC--CCCccc-ccccccchhhhhhHHHhhcCCCCCCEEEEEc
Q 025264 4 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS--VAKIDP--QAPLDK-VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG 78 (255)
Q Consensus 4 ~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~--~~~~p~--~~~~~~-aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G 78 (255)
++.+++.+ ||.|+++. +|.||.++++.. .+++|. ..++.. ..++..+.+|||..+++...+++|++|+|.|
T Consensus 86 S~~~~~~~-GD~v~g~~---gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSa 161 (343)
T KOG1196|consen 86 SGHPNYKK-GDLVWGIV---GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSA 161 (343)
T ss_pred cCCCCCCc-CceEEEec---cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEee
Confidence 46778888 99998876 599999998754 445543 344333 4456778999999999999999999999998
Q ss_pred C-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHH
Q 025264 79 L-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRA 156 (255)
Q Consensus 79 ~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~ 156 (255)
| |++|+.+.|+|+.+|+ +|++++.|++|.++++ ++|.+..+||++ +.++.+.+++..+.++|+.||.+|+.. ++.
T Consensus 162 AsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~-e~~~~~aL~r~~P~GIDiYfeNVGG~~-lDa 238 (343)
T KOG1196|consen 162 ASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE-ESDLSAALKRCFPEGIDIYFENVGGKM-LDA 238 (343)
T ss_pred ccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC-ccCHHHHHHHhCCCcceEEEeccCcHH-HHH
Confidence 7 9999999999999999 9999999999999995 579999999998 238888888877779999999999998 999
Q ss_pred HHHHhccCCceEEEEccCCC---CCcccc-C-chhhccCcEEEEeeeCCCCc--cCcHHHHHHHHHcCCCCCCCcceeee
Q 025264 157 ALECCHKGWGTSVIVGVAAS---GQEIST-R-PFQLVTGRVWKGTAFGGFKS--RSQVPWLVDKYMKKEIKVDEYVTHNM 229 (255)
Q Consensus 157 ~~~~l~~~~G~~v~~g~~~~---~~~~~~-~-~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (255)
.+..|+.. ||++.||..+- ..+..+ + ...+.+++++.|+....+.+ .+.+..+..++++|+++..+.+..
T Consensus 239 vl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~-- 315 (343)
T KOG1196|consen 239 VLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIAD-- 315 (343)
T ss_pred HHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHH--
Confidence 99999996 99999997541 111111 1 22244588898987665542 234566778889999988766643
Q ss_pred ecchHHHHHHHhhCCCee-EEEEecC
Q 025264 230 TLGEINEAFRYMHGGDCL-RCVLKMQ 254 (255)
Q Consensus 230 ~~~~~~~a~~~~~~~~~~-k~vi~~~ 254 (255)
.|++.++||.-|.+++.. |.++.+.
T Consensus 316 Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 316 GLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred HHhccHHHHHHHhccCcccceEEEee
Confidence 599999999999888876 8888764
No 101
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.95 E-value=4.1e-26 Score=189.95 Aligned_cols=240 Identities=16% Similarity=0.174 Sum_probs=191.6
Q ss_pred CCCCCccccCCccccccc---CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCC-----CCEE
Q 025264 3 NDRKSRFSINGKPIYHFM---GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIV 74 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~---~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~v 74 (255)
|.++..|++ ||+|+... ..|+|++|+.++..+++++|+++++++++.+++.+.|||+++.+...+++ +++|
T Consensus 75 G~~v~~~~~-Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~v 153 (336)
T cd08252 75 GSEVTLFKV-GDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTL 153 (336)
T ss_pred CCCCCCCCC-CCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEE
Confidence 556667888 99998753 35999999999999999999999999999999999999999888888887 9999
Q ss_pred EEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHH
Q 025264 75 AVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 152 (255)
Q Consensus 75 lI~G~-g~vG~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~ 152 (255)
+|+|+ |++|++++++++.+| + +|+++++++++.++++++|++++++++ .++.+.+....++++|+++|++|.+.
T Consensus 154 lV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~i~~~~~~~~d~vl~~~~~~~ 229 (336)
T cd08252 154 LIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHH---QDLAEQLEALGIEPVDYIFCLTDTDQ 229 (336)
T ss_pred EEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC---ccHHHHHHhhCCCCCCEEEEccCcHH
Confidence 99986 999999999999999 8 999999999999999999999888876 34556666443338999999999765
Q ss_pred HHHHHHHHhccCCceEEEEccCCCCCccccCchhh-ccCcEEEEeeeCCCC--c-------cCcHHHHHHHHHcCCCCCC
Q 025264 153 VMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFK--S-------RSQVPWLVDKYMKKEIKVD 222 (255)
Q Consensus 153 ~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~ 222 (255)
.+..++++++.+ |+++.+|... ..++...+ .++.++.+..+.... . .+.++++++++.++.+.+.
T Consensus 230 ~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (336)
T cd08252 230 HWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTT 304 (336)
T ss_pred HHHHHHHHhcCC-CEEEEecCCC----CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecc
Confidence 599999999996 9999998642 23444444 347777776543211 1 1346788899999987643
Q ss_pred Cc-ceeeeecchHHHHHHHhhCCCee-EEEEe
Q 025264 223 EY-VTHNMTLGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 223 ~~-~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
.. ....++++++++|++.+.+++.. |++++
T Consensus 305 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 305 LTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred eeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 11 12357999999999999887766 88763
No 102
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.95 E-value=3e-26 Score=190.72 Aligned_cols=216 Identities=20% Similarity=0.304 Sum_probs=175.5
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG 100 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~ 100 (255)
.|+|++|+.++.+.++++|+++++++++.+++++.+||+++... .++++++|+|+|+ |.+|++++++++..|+ ++++
T Consensus 115 ~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~ 192 (334)
T PRK13771 115 DGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIA 192 (334)
T ss_pred CceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEE
Confidence 58999999999999999999999999999999999999988655 8999999999998 9999999999999999 9999
Q ss_pred EcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 025264 101 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 180 (255)
Q Consensus 101 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 180 (255)
+++++++.+.++++ ++++++.+ ++.+.+++. +++|+++||+|+.. +...+++++++ |+++.+|........
T Consensus 193 ~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~ 263 (334)
T PRK13771 193 VTSSESKAKIVSKY-ADYVIVGS----KFSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTY 263 (334)
T ss_pred EeCCHHHHHHHHHH-HHHhcCch----hHHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCc
Confidence 99999999999888 76666543 345556554 26999999999876 89999999996 999999975432221
Q ss_pred ccCchh-hccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 181 STRPFQ-LVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 181 ~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
+..... +.++.++.+... ...+++++++++++++.+.. .+.++|+++++++|++.+.++... |+++.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 264 SLRLGYIILKDIEIIGHIS---ATKRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred ccCHHHHHhcccEEEEecC---CCHHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 222222 334778877642 23367889999999998653 366789999999999999877655 998865
No 103
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.95 E-value=2.4e-26 Score=190.79 Aligned_cols=233 Identities=24% Similarity=0.310 Sum_probs=186.2
Q ss_pred ccccCCcccccccCccceeeEEEEcC-CceEEcCCCCC--cccccc-cccchhhhhhHHHhhcCCCCCCEEEEEcC-ChH
Q 025264 8 RFSINGKPIYHFMGTSTFSQYTVVHD-VSVAKIDPQAP--LDKVCL-LGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTV 82 (255)
Q Consensus 8 ~~~~~g~~v~~~~~~g~~ae~~~v~~-~~~~~~p~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~v 82 (255)
.+++ ||+|+++ ++|++|+.++. +.++++|++++ +.+++. +++++.|||+++.....+.++++|||+|+ |++
T Consensus 83 ~~~~-Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~i 158 (329)
T cd05288 83 DFKV-GDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAV 158 (329)
T ss_pred CCCC-CCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchH
Confidence 4667 8998865 48999999999 99999999985 445544 88899999999888888999999999996 999
Q ss_pred HHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHh
Q 025264 83 GLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC 161 (255)
Q Consensus 83 G~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l 161 (255)
|++++|+++..|+ +|+++++++++.+.+++ +|++.++++++ .++.+.+.+.+++++|+++||+|+.. +...++++
T Consensus 159 g~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l 234 (329)
T cd05288 159 GSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT--PDLAEALKEAAPDGIDVYFDNVGGEI-LDAALTLL 234 (329)
T ss_pred HHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC--hhHHHHHHHhccCCceEEEEcchHHH-HHHHHHhc
Confidence 9999999999999 99999999999999988 99998998876 77888888777558999999999866 99999999
Q ss_pred ccCCceEEEEccCCCCCccc----cCch-hhccCcEEEEeeeCCCCc--cCcHHHHHHHHHcCCCCCCCcceeeeecchH
Q 025264 162 HKGWGTSVIVGVAASGQEIS----TRPF-QLVTGRVWKGTAFGGFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEI 234 (255)
Q Consensus 162 ~~~~G~~v~~g~~~~~~~~~----~~~~-~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (255)
+++ |+++.+|......... ++.. .+.++.++.++....... .+.+.++++++.++.+++.+ ..+++++++
T Consensus 235 ~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~ 311 (329)
T cd05288 235 NKG-GRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENA 311 (329)
T ss_pred CCC-ceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHH
Confidence 997 9999998754321111 1222 234488888776543321 13467788999999876553 356899999
Q ss_pred HHHHHHhhCCCee-EEEE
Q 025264 235 NEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 235 ~~a~~~~~~~~~~-k~vi 251 (255)
+++++.+.+++.. |+++
T Consensus 312 ~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 312 PEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHHhcCCCccceeC
Confidence 9999998877655 7763
No 104
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.95 E-value=7.7e-26 Score=186.69 Aligned_cols=240 Identities=19% Similarity=0.270 Sum_probs=197.1
Q ss_pred CCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-Ch
Q 025264 3 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GT 81 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 81 (255)
|.++..+++ ||+|+++..+|+|++|+.++...++++|+++++++++.++.++.++|+++.+...+.++++|+|+|+ |+
T Consensus 73 g~~~~~~~~-Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ 151 (323)
T cd05276 73 GPGVTGWKV-GDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASG 151 (323)
T ss_pred CCCCCCCCC-CCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcCh
Confidence 455667788 9999987667999999999999999999999999999999999999999888888999999999997 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHH
Q 025264 82 VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 160 (255)
Q Consensus 82 vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~ 160 (255)
+|++++++++..|+ +|+++++++++.+.++++|++.+++... .++.+.+.+.+.+ ++|+++|+.|+.. +...+++
T Consensus 152 ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~ 227 (323)
T cd05276 152 VGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRT--EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRA 227 (323)
T ss_pred HHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCc--hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHh
Confidence 99999999999999 9999999989999998899988888776 6787888777766 8999999999887 8889999
Q ss_pred hccCCceEEEEccCCCCCccccCchhh-ccCcEEEEeeeCCCCc-------cCcHHHHHHHHHcCCCCCCCcceeeeecc
Q 025264 161 CHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNMTLG 232 (255)
Q Consensus 161 l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (255)
++++ |+++.+|..... ....+...+ .++.++.++....... ...+.++++++.++.+.+ ...+.|+++
T Consensus 228 ~~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 303 (323)
T cd05276 228 LAPD-GRLVLIGLLGGA-KAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLE 303 (323)
T ss_pred hccC-CEEEEEecCCCC-CCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHH
Confidence 9996 999999875332 233444444 3588888887554311 123466778888888643 356789999
Q ss_pred hHHHHHHHhhCCCee-EEEE
Q 025264 233 EINEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 233 ~~~~a~~~~~~~~~~-k~vi 251 (255)
++++|++.+.++... |+++
T Consensus 304 ~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 304 EAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHHHHHhCCCcceEeC
Confidence 999999999876655 7763
No 105
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.95 E-value=9.7e-26 Score=187.25 Aligned_cols=209 Identities=20% Similarity=0.221 Sum_probs=171.4
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
.|+|+||+.++.+.++++|+++++.+++.+++++.|||+++ +..+++++++|+|+|+|++|++++++++..|+ +|+++
T Consensus 120 ~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~ 197 (329)
T cd08298 120 DGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAF 197 (329)
T ss_pred CCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEE
Confidence 58999999999999999999999999999999999999988 88999999999999989999999999999999 99999
Q ss_pred cCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccc
Q 025264 102 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 181 (255)
++++++++.++++|++.+++.++ . .++++|+++++.+....++.++++++++ |+++.+|.... ....
T Consensus 198 ~~~~~~~~~~~~~g~~~~~~~~~--~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~ 264 (329)
T cd08298 198 TRSGEHQELARELGADWAGDSDD--L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPA 264 (329)
T ss_pred cCChHHHHHHHHhCCcEEeccCc--c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCc
Confidence 99999999999999988877654 2 1237999999877666699999999996 99999885321 1222
Q ss_pred cCchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEE
Q 025264 182 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 182 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 251 (255)
++...+..+..+.++... ..+.+.+++++++++.+++ . .++|+++++++|++.+.+++.. |+++
T Consensus 265 ~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 265 FDYELLWGEKTIRSVANL---TRQDGEEFLKLAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred cchhhhhCceEEEEecCC---CHHHHHHHHHHHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 333333346666665422 2256888999999998754 2 4789999999999999887766 8764
No 106
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.95 E-value=1.3e-25 Score=186.94 Aligned_cols=221 Identities=21% Similarity=0.297 Sum_probs=184.6
Q ss_pred ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE
Q 025264 22 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG 100 (255)
Q Consensus 22 ~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~ 100 (255)
.|++++|++++.+.++++|+++++++++.+++++.+|++++.+..++.++++++|+|+ +.+|++++++++..|+ +|+.
T Consensus 118 ~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~ 196 (342)
T cd08266 118 DGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIA 196 (342)
T ss_pred CcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEE
Confidence 5889999999999999999999999999999999999999888889999999999998 7999999999999999 9999
Q ss_pred EcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCc
Q 025264 101 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 179 (255)
Q Consensus 101 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 179 (255)
+++++++.+.+++.+.+.+++..+ .++.+.+.+.+.+ ++|++++++|... ++..+++++++ |+++.+|..... .
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~~-~ 271 (342)
T cd08266 197 TAGSEDKLERAKELGADYVIDYRK--EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTGY-E 271 (342)
T ss_pred EeCCHHHHHHHHHcCCCeEEecCC--hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCCC-C
Confidence 999999999998888887887765 6777777777766 8999999999876 89999999996 999999875432 2
Q ss_pred cccCchh-hccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 180 ISTRPFQ-LVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 180 ~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
..++... +.++.++.+..... ...+.+++++++++.+.+ .+.++|+++++++|++.+.++... |+++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 272 APIDLRHVFWRQLSILGSTMGT---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred CCcCHHHHhhcceEEEEEecCC---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 2344422 44488887776432 246888999999998553 366789999999999998877666 988863
No 107
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.95 E-value=1.3e-25 Score=185.57 Aligned_cols=242 Identities=19% Similarity=0.281 Sum_probs=196.3
Q ss_pred CCCCCCccccCCccccccc-----CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEE
Q 025264 2 MNDRKSRFSINGKPIYHFM-----GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 76 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~-----~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI 76 (255)
+|+++..|++ ||+|+++. ..|++++|+.++...++++|+++++++++.+++++.+||+++....++.++++++|
T Consensus 72 ~g~~~~~~~~-Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI 150 (325)
T cd08253 72 VGEGVDGLKV-GDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLV 150 (325)
T ss_pred eCCCCCCCCC-CCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEE
Confidence 3566777888 99998764 26899999999999999999999999999999999999999888889999999999
Q ss_pred EcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHH
Q 025264 77 FGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVM 154 (255)
Q Consensus 77 ~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~ 154 (255)
+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++... .++.+.+.+.+.+ ++|+++++++... .
T Consensus 151 ~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~ 226 (325)
T cd08253 151 HGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRA--EDLADRILAATAGQGVDVIIEVLANVN-L 226 (325)
T ss_pred EcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--cCHHHHHHHHcCCCceEEEEECCchHH-H
Confidence 997 9999999999999999 9999999999999999999988888776 7788888877766 8999999999876 8
Q ss_pred HHHHHHhccCCceEEEEccCCCCCccccCchh-hccCcEEEEeeeCCCCc---cCcHHHHHHHHHcCCCCCCCcceeeee
Q 025264 155 RAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMT 230 (255)
Q Consensus 155 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
...+++++.+ |+++.+|... ...+++... +.++.++.+........ ...+..+.+++.++.+.+. ...+|+
T Consensus 227 ~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~ 301 (325)
T cd08253 227 AKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV--IAREYP 301 (325)
T ss_pred HHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEEc
Confidence 8899999996 9999998754 223444444 33377776665332211 1234556667777775443 457899
Q ss_pred cchHHHHHHHhhCCCee-EEEEec
Q 025264 231 LGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 231 ~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
+++++++++.+..+... |+++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 302 LEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred HHHHHHHHHHHHcCCCcceEEEeC
Confidence 99999999999877666 888763
No 108
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.95 E-value=5.4e-26 Score=184.89 Aligned_cols=240 Identities=18% Similarity=0.244 Sum_probs=193.2
Q ss_pred CCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-Ch
Q 025264 3 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GT 81 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 81 (255)
|.++.++++ ||+|+++. .|+|+||+.++...++++|+++++.+++.+++++.+||.++.+...++++++|+|+|+ |+
T Consensus 43 g~~~~~~~~-Gd~V~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~ 120 (293)
T cd05195 43 GSGVTGLKV-GDRVMGLA-PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGG 120 (293)
T ss_pred cCCccCCCC-CCEEEEEe-cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCH
Confidence 556667888 99998764 5899999999999999999999999999999999999999888889999999999986 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC--CcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHH
Q 025264 82 VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG--VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAAL 158 (255)
Q Consensus 82 vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g--~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~ 158 (255)
+|++++++++..|+ +++++++++++.+.++++| ++.++++.+ .++.+.+++.+.+ ++|+++|++|++. ++..+
T Consensus 121 ~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~ 196 (293)
T cd05195 121 VGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD--LSFADGILRATGGRGVDVVLNSLSGEL-LRASW 196 (293)
T ss_pred HHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc--hhHHHHHHHHhCCCCceEEEeCCCchH-HHHHH
Confidence 99999999999999 9999999989999998888 677888776 7788888888877 8999999999985 99999
Q ss_pred HHhccCCceEEEEccCCCCCccccCchhhccCcEEEEeeeCCCC--c----cCcHHHHHHHHHcCCCCCCCcceeeeecc
Q 025264 159 ECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK--S----RSQVPWLVDKYMKKEIKVDEYVTHNMTLG 232 (255)
Q Consensus 159 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (255)
++++++ |+++.+|.........+....+.++..+....+.... . .+.+.++++++.++.+. +.....++++
T Consensus 197 ~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 273 (293)
T cd05195 197 RCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVVPSA 273 (293)
T ss_pred HhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeeechh
Confidence 999996 9999998754321122333333335566555433221 0 12467788888888864 3455679999
Q ss_pred hHHHHHHHhhCCCee-EEEE
Q 025264 233 EINEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 233 ~~~~a~~~~~~~~~~-k~vi 251 (255)
+++++++.+..+... |+++
T Consensus 274 ~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 274 SEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred hHHHHHHHHhcCCCCceecC
Confidence 999999999877665 7763
No 109
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.95 E-value=1.6e-25 Score=186.04 Aligned_cols=233 Identities=27% Similarity=0.402 Sum_probs=187.0
Q ss_pred CCCCCccccCCccccccc---------------------------CccceeeEEEEcCCceEEcCCCCCcccccccccch
Q 025264 3 NDRKSRFSINGKPIYHFM---------------------------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 55 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~---------------------------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 55 (255)
|+++..+.+ ||+|+++. ..|+|++|++++...++++|+++++++++.+++++
T Consensus 70 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~ 148 (332)
T cd08259 70 GEGVERFKP-GDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVV 148 (332)
T ss_pred CCCCccCCC-CCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHH
Confidence 556667778 88888653 25899999999999999999999999999999999
Q ss_pred hhhhhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHH
Q 025264 56 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 134 (255)
Q Consensus 56 ~ta~~~l~~~~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~ 134 (255)
.|||+++.. ..+++++++||+|+ |++|++++++++..|+ +|+++++++++.+.++++|.+.+++.. . +.+.+.
T Consensus 149 ~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~ 222 (332)
T cd08259 149 GTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS---K-FSEDVK 222 (332)
T ss_pred HHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH---H-HHHHHH
Confidence 999998866 88999999999997 9999999999999999 999999998999999888988777653 3 556665
Q ss_pred hhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchh-hccCcEEEEeeeCCCCccCcHHHHHHH
Q 025264 135 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKSRSQVPWLVDK 213 (255)
Q Consensus 135 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~ 213 (255)
+.. ++|++++++|... ....+++++++ |+++.+|...... ..++... .+++.++.++.. .....+.+++++
T Consensus 223 ~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 294 (332)
T cd08259 223 KLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPDP-APLRPGLLILKEIRIIGSIS---ATKADVEEALKL 294 (332)
T ss_pred hcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCCC-cCCCHHHHHhCCcEEEEecC---CCHHHHHHHHHH
Confidence 543 6999999999887 88999999996 9999998754321 1122222 234666666531 123568889999
Q ss_pred HHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEe
Q 025264 214 YMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
++++.+.+ .+.++|+++++++|++.+.+++.. |++++
T Consensus 295 ~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 295 VKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 99998653 366789999999999999887766 88864
No 110
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.95 E-value=1.4e-25 Score=185.55 Aligned_cols=241 Identities=17% Similarity=0.247 Sum_probs=197.7
Q ss_pred CCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-Ch
Q 025264 3 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GT 81 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 81 (255)
|+++..+++ ||+|+++..+|++++|+.++...++++|+++++.+++.++.++.+||+++.+...++++++++|+|+ |+
T Consensus 73 g~~~~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~ 151 (325)
T TIGR02824 73 GEGVSRWKV-GDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASG 151 (325)
T ss_pred CCCCCCCCC-CCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcch
Confidence 455667788 9999987666999999999999999999999999999999999999998888899999999999997 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHH
Q 025264 82 VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 160 (255)
Q Consensus 82 vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~ 160 (255)
+|++++++++..|+ +|+++++++++.+.++++|++.+++... .++.+.+.....+ ++|++++++|... +...+++
T Consensus 152 ~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~ 227 (325)
T TIGR02824 152 IGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYRE--EDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKA 227 (325)
T ss_pred HHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCc--hhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHHh
Confidence 99999999999999 9999999999999888899888887765 6787888877766 8999999999875 8899999
Q ss_pred hccCCceEEEEccCCCCCccccCchhh-ccCcEEEEeeeCCCCc-------cCcHHHHHHHHHcCCCCCCCcceeeeecc
Q 025264 161 CHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNMTLG 232 (255)
Q Consensus 161 l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (255)
++++ |+++.+|....... .++...+ .++.++.++....... ...+.+++++++++.+.+ .....|+++
T Consensus 228 l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~ 303 (325)
T TIGR02824 228 LALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLE 303 (325)
T ss_pred hccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHH
Confidence 9996 99999987542222 4444444 4599998887554211 112455778888887643 355789999
Q ss_pred hHHHHHHHhhCCCee-EEEEe
Q 025264 233 EINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 233 ~~~~a~~~~~~~~~~-k~vi~ 252 (255)
+++++++.+.++... |++++
T Consensus 304 ~~~~~~~~~~~~~~~~~~v~~ 324 (325)
T TIGR02824 304 DAAQAHALMESGDHIGKIVLT 324 (325)
T ss_pred HHHHHHHHHHhCCCcceEEEe
Confidence 999999998877666 88875
No 111
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.94 E-value=1.2e-25 Score=184.85 Aligned_cols=204 Identities=25% Similarity=0.375 Sum_probs=169.9
Q ss_pred CCCCCccccCCccccccc----------------------------CccceeeEEEEcCCceEEcCCCCCcccccccccc
Q 025264 3 NDRKSRFSINGKPIYHFM----------------------------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 54 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~----------------------------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~ 54 (255)
|+++..|++ ||+|++.. ..|+|+||++++..+++++|+++++++++ ++.+
T Consensus 71 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~ 148 (306)
T cd08258 71 GPDVEGWKV-GDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEP 148 (306)
T ss_pred CCCcCcCCC-CCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhch
Confidence 566777888 99887643 24899999999999999999999999887 6668
Q ss_pred hhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC--CcchHHHHHhcCCcEEeCCCCCCchHHHH
Q 025264 55 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI--DPKKFDRAKNFGVTEFVNPKDHDKPIQQV 132 (255)
Q Consensus 55 ~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~--~~~~~~~~~~~g~~~vi~~~~~~~~~~~~ 132 (255)
+.+||+++....+++++++|||.|+|.+|++++|+++..|+ +|++++. ++++.+.++++|++.+ ++++ .++.+.
T Consensus 149 ~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~--~~~~~~ 224 (306)
T cd08258 149 LAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGGE--EDLAEL 224 (306)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCCc--CCHHHH
Confidence 89999998888999999999998889999999999999999 8877743 4457778889999888 7776 788888
Q ss_pred HHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHH
Q 025264 133 LVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWL 210 (255)
Q Consensus 133 i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~ 210 (255)
+...+++ ++|+++|++|....+...+++++++ |+++.+|... .....++...++. ++++.|++.+.. ++++++
T Consensus 225 l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~ 299 (306)
T cd08258 225 VNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRSSTP---ASWETA 299 (306)
T ss_pred HHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEecCch---HhHHHH
Confidence 8887776 8999999998766689999999997 9999999864 2334556566554 999999987544 679999
Q ss_pred HHHHHcC
Q 025264 211 VDKYMKK 217 (255)
Q Consensus 211 ~~~~~~~ 217 (255)
++++++|
T Consensus 300 ~~~~~~~ 306 (306)
T cd08258 300 LRLLASG 306 (306)
T ss_pred HHHHhcC
Confidence 9998875
No 112
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.94 E-value=1.7e-25 Score=185.84 Aligned_cols=215 Identities=27% Similarity=0.404 Sum_probs=174.0
Q ss_pred CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEE
Q 025264 21 GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 100 (255)
Q Consensus 21 ~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~ 100 (255)
..|+|++|+.++..+++++|+++++++++.+++.+.|||+++.. .+++++++|+|+|+|++|++++++++..|+ +|++
T Consensus 114 ~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~ 191 (330)
T cd08245 114 TQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVA 191 (330)
T ss_pred cCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEE
Confidence 35899999999999999999999999999999999999998744 789999999999888899999999999999 9999
Q ss_pred EcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 025264 101 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 180 (255)
Q Consensus 101 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 180 (255)
+++++++.+.++++|++.+++..+ ...... ..+++|+++|+++........+++++++ |+++.++..... ..
T Consensus 192 ~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~ 263 (330)
T cd08245 192 ITRSPDKRELARKLGADEVVDSGA--ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PF 263 (330)
T ss_pred EeCCHHHHHHHHHhCCcEEeccCC--cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-cc
Confidence 999999999999999988887664 433332 2237999999988766689999999996 999999875322 22
Q ss_pred ccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEE
Q 025264 181 STRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 181 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 251 (255)
..+...+.. +.++.++..+. ...++.++++++++.+.+ ..++|+++++++|++.+.+++.. |+|+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 264 SPDIFPLIMKRQSIAGSTHGG---RADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred ccchHHHHhCCCEEEEeccCC---HHHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 222233433 77777776432 257888899999998754 24689999999999999887766 7764
No 113
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.94 E-value=1.9e-25 Score=181.17 Aligned_cols=228 Identities=26% Similarity=0.380 Sum_probs=178.3
Q ss_pred CCCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCCh
Q 025264 2 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGT 81 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~ 81 (255)
.|+++.++++ ||+|+++ ++|++|++++...++++|+++++++++.+ .+++|||+++ ...+++++++++|+|+|+
T Consensus 35 vG~~v~~~~~-Gd~V~~~---~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~ 108 (277)
T cd08255 35 VGSGVTGFKP-GDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGL 108 (277)
T ss_pred eCCCCCCCCC-CCEEEec---CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCH
Confidence 3566778888 9999876 46999999999999999999999998888 6899999986 578999999999998899
Q ss_pred HHHHHHHHHHHcCCCe-EEEEcCCcchHHHHHhcC-CcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHH
Q 025264 82 VGLAVAEGAKAAGASR-VIGIDIDPKKFDRAKNFG-VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAAL 158 (255)
Q Consensus 82 vG~~a~~l~~~~g~~~-v~~~~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~ 158 (255)
+|++++++|+.+|+ + |+++++++++.+.++++| ++.+++..+ ..+.+ ++|++||+++....++..+
T Consensus 109 vg~~~i~~a~~~g~-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~ 177 (277)
T cd08255 109 VGLLAAQLAKAAGA-REVVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETAL 177 (277)
T ss_pred HHHHHHHHHHHcCC-CcEEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHH
Confidence 99999999999999 6 999999999999889999 555554331 11234 8999999988766689999
Q ss_pred HHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCC---------ccCcHHHHHHHHHcCCCCCCCcceee
Q 025264 159 ECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK---------SRSQVPWLVDKYMKKEIKVDEYVTHN 228 (255)
Q Consensus 159 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (255)
++++++ |+++.+|..... .... ...+.. ..++.+....... ..+.++++++++.++.+.. .+.++
T Consensus 178 ~~l~~~-g~~~~~g~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~ 252 (277)
T cd08255 178 RLLRDR-GRVVLVGWYGLK-PLLL-GEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHR 252 (277)
T ss_pred HHhcCC-cEEEEEeccCCC-cccc-HHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCc
Confidence 999997 999999875432 1111 122332 5566666543211 1256889999999998543 35678
Q ss_pred eecchHHHHHHHhhCC--CeeEEEE
Q 025264 229 MTLGEINEAFRYMHGG--DCLRCVL 251 (255)
Q Consensus 229 ~~~~~~~~a~~~~~~~--~~~k~vi 251 (255)
|+++++++|++.+.++ ..+|+++
T Consensus 253 ~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 253 VPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cCHHHHHHHHHHHHcCCccceeeeC
Confidence 9999999999999877 3448764
No 114
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.94 E-value=4.6e-25 Score=182.76 Aligned_cols=237 Identities=16% Similarity=0.188 Sum_probs=183.9
Q ss_pred CCCccccCCccccccc------CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHH--hhcCCC-CCCEEE
Q 025264 5 RKSRFSINGKPIYHFM------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW--NTAKVE-PGSIVA 75 (255)
Q Consensus 5 ~~~~~~~~g~~v~~~~------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~-~~~~vl 75 (255)
++.++++ ||+|++.. ..|+|++|++++.+.++++|+++++++++.++.++++|+.++. +....+ ++++|+
T Consensus 73 ~~~~~~~-Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vl 151 (324)
T cd08288 73 SSPRFKP-GDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVL 151 (324)
T ss_pred CCCCCCC-CCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEE
Confidence 3455777 99998752 3689999999999999999999999999999999999987754 223455 678999
Q ss_pred EEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHH
Q 025264 76 VFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVM 154 (255)
Q Consensus 76 I~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~ 154 (255)
|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|+++++++++ ... .+...+.+++|.++|+++++. +
T Consensus 152 I~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~--~~~~~~~~~~~~~~d~~~~~~-~ 225 (324)
T cd08288 152 VTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE--LSE--PGRPLQKERWAGAVDTVGGHT-L 225 (324)
T ss_pred EECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch--hhH--hhhhhccCcccEEEECCcHHH-H
Confidence 9998 9999999999999999 9999999999999999999999988764 322 455555447899999999865 7
Q ss_pred HHHHHHhccCCceEEEEccCCCCCccccCchhh-ccCcEEEEeeeCCCCc---cCcHHHHHHHHHcCCCCCCCcceeeee
Q 025264 155 RAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMT 230 (255)
Q Consensus 155 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
...+..++.+ |+++.+|.... ...+.+...+ .++.++.+++...... .+.+..+.+++.++.+.+ +.+.++
T Consensus 226 ~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~ 300 (324)
T cd08288 226 ANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA---LTREIP 300 (324)
T ss_pred HHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc---cceeec
Confidence 8888999996 99999987532 2223344444 4588888875433221 124556667777777543 357899
Q ss_pred cchHHHHHHHhhCCCee-EEEEec
Q 025264 231 LGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 231 ~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
++++++|++.+.+++.. |+++++
T Consensus 301 ~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 301 LADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred HHHHHHHHHHHhcCCccCeEEEeC
Confidence 99999999999888776 988863
No 115
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=3.2e-25 Score=183.45 Aligned_cols=237 Identities=20% Similarity=0.278 Sum_probs=192.0
Q ss_pred CCCCCccccCCccccccc-----CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEE
Q 025264 3 NDRKSRFSINGKPIYHFM-----GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 77 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~-----~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~ 77 (255)
|+++..|+. ||+|+++. ..|++++|+.++..+++++|+++++.+++.++..+.+||+++.+..+++++++++|+
T Consensus 73 G~~~~~~~~-Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~ 151 (326)
T cd08272 73 GEGVTRFRV-GDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIH 151 (326)
T ss_pred CCCCCCCCC-CCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 556677888 99999764 268999999999999999999999999999999999999998888999999999999
Q ss_pred cC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHH
Q 025264 78 GL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMR 155 (255)
Q Consensus 78 G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~ 155 (255)
|+ |++|++++++++..|+ +|++++++ ++.+.++++|++.+++... . +.+.+.+.+++ ++|+++|++++.. ..
T Consensus 152 g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~ 225 (326)
T cd08272 152 GGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE--T-VVEYVAEHTGGRGFDVVFDTVGGET-LD 225 (326)
T ss_pred cCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch--h-HHHHHHHhcCCCCCcEEEECCChHH-HH
Confidence 86 9999999999999999 99999987 8888999999988888765 5 77888888877 8999999999876 88
Q ss_pred HHHHHhccCCceEEEEccCCCCCccccCchhhccCcEEEEeeeCC--CC------ccCcHHHHHHHHHcCCCCCCCcce-
Q 025264 156 AALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG--FK------SRSQVPWLVDKYMKKEIKVDEYVT- 226 (255)
Q Consensus 156 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~- 226 (255)
..+++++++ |+++.+|... ..++... ..++.++.++.... .. ....+.++++++.++.+.+ .+.
T Consensus 226 ~~~~~l~~~-g~~v~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~ 298 (326)
T cd08272 226 ASFEAVALY-GRVVSILGGA---THDLAPL-SFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRP--LLDP 298 (326)
T ss_pred HHHHHhccC-CEEEEEecCC---ccchhhH-hhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccc--cccc
Confidence 899999996 9999998753 1222222 13477776665332 10 1234667888888888643 233
Q ss_pred eeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 227 HNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 227 ~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
+.|++++++++++.+.+++.. |+++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 299 RTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 789999999999998876655 888763
No 116
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=5.4e-25 Score=182.18 Aligned_cols=243 Identities=22% Similarity=0.347 Sum_probs=195.1
Q ss_pred CCCCCCccccCCccccccc-----CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEE
Q 025264 2 MNDRKSRFSINGKPIYHFM-----GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 76 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~-----~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI 76 (255)
.|+++..+++ ||+|+++. ..|++++|+.++.+.++++|+++++++++.++.++.+||+++.....+.++++++|
T Consensus 72 ~G~~~~~~~~-Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli 150 (328)
T cd08268 72 VGAGVTGFAV-GDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLI 150 (328)
T ss_pred eCCCCCcCCC-CCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence 3566777888 99998763 24899999999999999999999999999999999999999888889999999999
Q ss_pred EcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHH
Q 025264 77 FGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVM 154 (255)
Q Consensus 77 ~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~ 154 (255)
+|+ |++|++++++++..|+ +++.+++++++.+.++++|++.+++.+. .++.+.+.+.+.+ ++|++++++++.. .
T Consensus 151 ~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~ 226 (328)
T cd08268 151 TAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE--EDLVAEVLRITGGKGVDVVFDPVGGPQ-F 226 (328)
T ss_pred ecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC--ccHHHHHHHHhCCCCceEEEECCchHh-H
Confidence 997 9999999999999999 9999999999999998899888888776 7787778777766 8999999999966 8
Q ss_pred HHHHHHhccCCceEEEEccCCCCCccccCch-hhccCcEEEEeeeCCCC-ccC----cHHHHHHHHHcCCCCCCCcceee
Q 025264 155 RAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVTGRVWKGTAFGGFK-SRS----QVPWLVDKYMKKEIKVDEYVTHN 228 (255)
Q Consensus 155 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~ 228 (255)
...+++++++ |+++.+|.... ....++.. .+.++.++.++...... ... .++.+.+++.++.+.+. ....
T Consensus 227 ~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 302 (328)
T cd08268 227 AKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPV--VDRV 302 (328)
T ss_pred HHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCC--cccE
Confidence 8999999996 99999987543 22233333 34458888777654321 112 23445556667775443 4568
Q ss_pred eecchHHHHHHHhhCCCee-EEEEec
Q 025264 229 MTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 229 ~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
|++++++++++.+..+... |+++++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 303 FPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred EcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 9999999999999877766 888763
No 117
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.94 E-value=2.5e-25 Score=184.52 Aligned_cols=225 Identities=24% Similarity=0.322 Sum_probs=177.7
Q ss_pred CCCCCccccCCcccccc---------------------------cCccceeeEEEEcCCceEEcCCCCCcccccccccch
Q 025264 3 NDRKSRFSINGKPIYHF---------------------------MGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 55 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~---------------------------~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 55 (255)
|+++..+++ ||+|+.+ ...|+|++|++++...++++|+++++++++.+++++
T Consensus 70 G~~v~~~~~-Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~ 148 (325)
T cd08264 70 GDHVKGVKK-GDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAA 148 (325)
T ss_pred CCCCCCCCC-CCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhh
Confidence 556666777 8888643 135899999999999999999999999999999999
Q ss_pred hhhhhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHH
Q 025264 56 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 134 (255)
Q Consensus 56 ~ta~~~l~~~~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~ 134 (255)
.+||+++. ..+++++++|+|+|+ |++|++++++|+.+|+ +|+++++ .+.++++|++++++.++ ..+.+.
T Consensus 149 ~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~~----~~~~l~ 218 (325)
T cd08264 149 LTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYDE----VEEKVK 218 (325)
T ss_pred HHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecchH----HHHHHH
Confidence 99999875 489999999999998 9999999999999999 8888863 37778899988887653 245566
Q ss_pred hhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHH
Q 025264 135 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDK 213 (255)
Q Consensus 135 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~ 213 (255)
+.+ +++|+++|++|... +...+++++++ |+++.+|... .....++...+.. +.++.++..+. ++.+++++++
T Consensus 219 ~~~-~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l 291 (325)
T cd08264 219 EIT-KMADVVINSLGSSF-WDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGGT---RKELLELVKI 291 (325)
T ss_pred HHh-CCCCEEEECCCHHH-HHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCCC---HHHHHHHHHH
Confidence 666 57999999999865 99999999997 9999998742 2224455555544 77777764332 3578888998
Q ss_pred HHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EE
Q 025264 214 YMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RC 249 (255)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~ 249 (255)
+.+.. + .+.++|+++++++|++.+.++... |+
T Consensus 292 ~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 292 AKDLK--V--KVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 86433 2 255789999999999998876554 54
No 118
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.94 E-value=8.9e-25 Score=183.13 Aligned_cols=243 Identities=16% Similarity=0.228 Sum_probs=178.9
Q ss_pred CCCCCC-ccccCCccccccc-----CccceeeEEEEcCC----ceEEcCCCCCcccccccccchhhhhhHHHhhc-CCCC
Q 025264 2 MNDRKS-RFSINGKPIYHFM-----GTSTFSQYTVVHDV----SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA-KVEP 70 (255)
Q Consensus 2 ~g~~~~-~~~~~g~~v~~~~-----~~g~~ae~~~v~~~----~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~ 70 (255)
+|+++. +|++ ||+|+++. ..|+|++|++++.. .++++|+++++++++.++.++.|||+++.+.. ++++
T Consensus 73 vG~~v~~~~~~-Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~ 151 (352)
T cd08247 73 VGSNVASEWKV-GDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGP 151 (352)
T ss_pred eCcccccCCCC-CCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCC
Confidence 356776 7888 99998764 25899999999987 78999999999999999999999999987766 7999
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCCcchHHHHHhcCCcEEeCCCCCCch---HHHH-HHhhcCC-CccE
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP---IQQV-LVDLTDG-GVDY 143 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~---~~~~-i~~~~~~-~~d~ 143 (255)
|++|+|+|+ |.+|++++++|+..|.. .++++. ++++.+.++++|++.+++.++ .+ +... ++..+++ ++|+
T Consensus 152 g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~d~ 228 (352)
T cd08247 152 DSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDA--HSGVKLLKPVLENVKGQGKFDL 228 (352)
T ss_pred CCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCC--CcccchHHHHHHhhcCCCCceE
Confidence 999999998 79999999999988542 466665 566667888999988988765 44 4444 4444434 8999
Q ss_pred EEecCCcHHHHHHHHHHhc---cCCceEEEEccCCCCCcc--c--------cCchhhccCc-----EEEEeeeCCCCccC
Q 025264 144 SFECIGNVSVMRAALECCH---KGWGTSVIVGVAASGQEI--S--------TRPFQLVTGR-----VWKGTAFGGFKSRS 205 (255)
Q Consensus 144 v~d~~g~~~~~~~~~~~l~---~~~G~~v~~g~~~~~~~~--~--------~~~~~~~~~~-----~~~g~~~~~~~~~~ 205 (255)
++||+|+.......+++++ ++ |+++.++........ + .....+.+.. .+....... ..+
T Consensus 229 vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 305 (352)
T cd08247 229 ILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDP--NAD 305 (352)
T ss_pred EEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecC--CHH
Confidence 9999999655889999999 96 999987532111000 0 1111111122 222111111 124
Q ss_pred cHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 206 QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
.+.++++++.++.+.+ .+.++++++++++|++.+.+++.. |+++++
T Consensus 306 ~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 306 WIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred HHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 5778889999998653 356789999999999999887766 988763
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.94 E-value=1.1e-24 Score=179.95 Aligned_cols=241 Identities=25% Similarity=0.396 Sum_probs=195.8
Q ss_pred CCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-Ch
Q 025264 3 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GT 81 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 81 (255)
|+++..++. |++|+++...|++++|+.++...++++|++++..+++.+..++.+|++++.....++++++|+|+|+ |+
T Consensus 73 g~~~~~~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~ 151 (323)
T cd08241 73 GEGVTGFKV-GDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGG 151 (323)
T ss_pred CCCCCCCCC-CCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCch
Confidence 445566778 9999987546899999999999999999999999888888899999998877889999999999998 99
Q ss_pred HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHH
Q 025264 82 VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 160 (255)
Q Consensus 82 vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~ 160 (255)
+|++++++++..|+ +|+++++++++.+.++++|++.+++... .++.+.+.+.+.+ ++|++++++|+.. ....+++
T Consensus 152 ~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~ 227 (323)
T cd08241 152 VGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYRD--PDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRS 227 (323)
T ss_pred HHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecCC--ccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHh
Confidence 99999999999999 8999999999999999999988888776 7788888888777 8999999999865 8899999
Q ss_pred hccCCceEEEEccCCCCCccccCc-hhhccCcEEEEeeeCCCCc------cCcHHHHHHHHHcCCCCCCCcceeeeecch
Q 025264 161 CHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKGTAFGGFKS------RSQVPWLVDKYMKKEIKVDEYVTHNMTLGE 233 (255)
Q Consensus 161 l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (255)
++++ |+++.+|....... .++. ..+.++.++.+.....+.. ...+.++++++.++.+.+ .....|++++
T Consensus 228 ~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 303 (323)
T cd08241 228 LAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQ 303 (323)
T ss_pred hccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHH
Confidence 9996 99999987432111 1222 2233478888876544321 134567888888888643 3567899999
Q ss_pred HHHHHHHhhCCCee-EEEEe
Q 025264 234 INEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 234 ~~~a~~~~~~~~~~-k~vi~ 252 (255)
++++++.+..+... |++++
T Consensus 304 ~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 304 AAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHHHHHhCCCCCcEEeC
Confidence 99999988776665 87763
No 120
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=5.6e-25 Score=182.76 Aligned_cols=238 Identities=24% Similarity=0.289 Sum_probs=182.5
Q ss_pred CCCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-C
Q 025264 2 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-G 80 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g 80 (255)
.|+++..|++ ||+|++....|+|++|+.++...++++|+++++++++.++.++.+||+++.....+.++++|+|+|+ |
T Consensus 72 vG~~v~~~~~-Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g 150 (331)
T cd08273 72 LGSGVTGFEV-GDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASG 150 (331)
T ss_pred eCCCCccCCC-CCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCc
Confidence 3567777888 9999987556999999999999999999999999999999999999999888789999999999997 9
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHH
Q 025264 81 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALEC 160 (255)
Q Consensus 81 ~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~ 160 (255)
++|++++++++..|+ +|+++++ +++.+.++++|+.. ++... .++.+. ...++++|+++||+++.. +...+++
T Consensus 151 ~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~~--~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~ 222 (331)
T cd08273 151 GVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYRT--KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAA 222 (331)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCCC--cchhhh--hccCCCceEEEECCchHH-HHHHHHH
Confidence 999999999999999 9999997 88888889999764 44443 444443 233348999999999988 8999999
Q ss_pred hccCCceEEEEccCCCCCccccC--ch-----------hhccCcEEEEeeeCCCC------ccCcHHHHHHHHHcCCCCC
Q 025264 161 CHKGWGTSVIVGVAASGQEISTR--PF-----------QLVTGRVWKGTAFGGFK------SRSQVPWLVDKYMKKEIKV 221 (255)
Q Consensus 161 l~~~~G~~v~~g~~~~~~~~~~~--~~-----------~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~ 221 (255)
++.+ |+++.+|........... +. .......+.+....... ..+.+.++++++.++.+.+
T Consensus 223 l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 301 (331)
T cd08273 223 LAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP 301 (331)
T ss_pred hcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC
Confidence 9996 999999875432221111 10 11112222222211111 1245778889999998653
Q ss_pred CCcceeeeecchHHHHHHHhhCCCee-EEEE
Q 025264 222 DEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 222 ~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 251 (255)
.+.++|++++++++++.+.++... |+|+
T Consensus 302 --~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 302 --KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred --CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 356789999999999998877665 7775
No 121
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.94 E-value=2.8e-25 Score=186.02 Aligned_cols=240 Identities=21% Similarity=0.248 Sum_probs=180.9
Q ss_pred CCCCCCccccCCccccccc---CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCC----CCEE
Q 025264 2 MNDRKSRFSINGKPIYHFM---GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP----GSIV 74 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~---~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----~~~v 74 (255)
.|.++..+++ ||+|+++. ..|+|++|+.++.+.++++|+++++++++.+++++.|||+++.+...+.+ +++|
T Consensus 88 vG~~v~~~~~-Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~v 166 (350)
T cd08248 88 IGSGVKSFEI-GDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRV 166 (350)
T ss_pred cCCCcccCCC-CCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEE
Confidence 3556777888 99998754 36999999999999999999999999999999999999999877777754 9999
Q ss_pred EEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHH
Q 025264 75 AVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 153 (255)
Q Consensus 75 lI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~ 153 (255)
+|+|+ |++|++++++++.+|+ +|+++.++ ++.+.++++|++.+++..+ .++.+.+... +++|+++|++|.+.
T Consensus 167 lI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~~~l~~~--~~vd~vi~~~g~~~- 239 (350)
T cd08248 167 LILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGADDVIDYNN--EDFEEELTER--GKFDVILDTVGGDT- 239 (350)
T ss_pred EEECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCCceEEECCC--hhHHHHHHhc--CCCCEEEECCChHH-
Confidence 99996 9999999999999999 88888754 6777889999988888765 5666655432 37999999999885
Q ss_pred HHHHHHHhccCCceEEEEccCCCCCc--cccCch------hhcc-CcE-EE-Ee---eeCCCCccCcHHHHHHHHHcCCC
Q 025264 154 MRAALECCHKGWGTSVIVGVAASGQE--ISTRPF------QLVT-GRV-WK-GT---AFGGFKSRSQVPWLVDKYMKKEI 219 (255)
Q Consensus 154 ~~~~~~~l~~~~G~~v~~g~~~~~~~--~~~~~~------~~~~-~~~-~~-g~---~~~~~~~~~~~~~~~~~~~~~~~ 219 (255)
....+++++++ |+++.+|....... ..+... .+.. ... +. +. +.........+.++++++.++.+
T Consensus 240 ~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 318 (350)
T cd08248 240 EKWALKLLKKG-GTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI 318 (350)
T ss_pred HHHHHHHhccC-CEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCE
Confidence 99999999996 99999986431111 011000 0110 100 00 00 00001123468889999999986
Q ss_pred CCCCcceeeeecchHHHHHHHhhCCCee-EEEEe
Q 025264 220 KVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 252 (255)
Q Consensus 220 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~ 252 (255)
.+ .+.+.|+++++++|++.+.+++.. |++++
T Consensus 319 ~~--~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 319 KP--VIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred ec--ccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 43 356789999999999998877655 88763
No 122
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.94 E-value=9.2e-25 Score=176.15 Aligned_cols=202 Identities=27% Similarity=0.375 Sum_probs=166.0
Q ss_pred CCCCCccccCCccccccc-----------------------CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhh
Q 025264 3 NDRKSRFSINGKPIYHFM-----------------------GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGL 59 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~-----------------------~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~ 59 (255)
|.++..|++ ||+|++.. ..|+|++|+.++...++++|+++++++++.++.++.|||
T Consensus 45 G~~v~~~~~-Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~ 123 (271)
T cd05188 45 GPGVTGVKV-GDRVVVLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAY 123 (271)
T ss_pred CCCCCcCCC-CCEEEEcCCCCCCCCHHHHhhCCCCCEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHH
Confidence 556777888 99998654 258999999999999999999999999999999999999
Q ss_pred hHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC
Q 025264 60 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG 139 (255)
Q Consensus 60 ~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~ 139 (255)
+++.....++++++|||+|+|++|++++++++..|. +|+++++++++.+.++++|++.+++..+ .+..+.+. .+.+
T Consensus 124 ~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~-~~~~ 199 (271)
T cd05188 124 HALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR-LTGG 199 (271)
T ss_pred HHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH-HhcC
Confidence 998777777999999999986699999999999998 9999999999999999999988888776 66766666 4455
Q ss_pred -CccEEEecCCcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhccCcEEEEeeeCCCCccCcHHHHHHH
Q 025264 140 -GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDK 213 (255)
Q Consensus 140 -~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 213 (255)
++|+++++++........+++++++ |+++.+|..............+.++.++.++....+ .++++++++
T Consensus 200 ~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 200 GGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred CCCCEEEECCCCHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 8999999999844489999999996 999999886543322222333445889988875543 466666655
No 123
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=1.7e-24 Score=179.19 Aligned_cols=238 Identities=19% Similarity=0.300 Sum_probs=187.1
Q ss_pred CCCCCccccCCccccccc---CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC
Q 025264 3 NDRKSRFSINGKPIYHFM---GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL 79 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~---~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~ 79 (255)
|+++..+++ ||+|+++. ..|+|++|+.++...++++|++++..+++.+++++.+|++++.+...++++++++|+|+
T Consensus 72 G~~~~~~~~-Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~ 150 (325)
T cd08271 72 GAKVTGWKV-GDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGG 150 (325)
T ss_pred CCCCCcCCC-CCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 556667788 99998764 36899999999999999999999999999999999999999888889999999999998
Q ss_pred -ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHH
Q 025264 80 -GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAA 157 (255)
Q Consensus 80 -g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~ 157 (255)
|++|++++++++..|+ +|+++. ++++.+.++++|++.+++... ..+.+.+.+.+.+ ++|++++++++.. ....
T Consensus 151 ~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~ 225 (325)
T cd08271 151 AGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYND--EDVCERIKEITGGRGVDAVLDTVGGET-AAAL 225 (325)
T ss_pred ccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCCC--ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHH
Confidence 8999999999999999 888877 677888888899988888776 6777888887776 8999999999877 6778
Q ss_pred HHHhccCCceEEEEccCCCCCccccCchhhccCcEEEEeeeCCC----------CccCcHHHHHHHHHcCCCCCCCccee
Q 025264 158 LECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF----------KSRSQVPWLVDKYMKKEIKVDEYVTH 227 (255)
Q Consensus 158 ~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (255)
+++++++ |+++.++..... . . ...+..+..+....+... ...+.+.+++++++++.+.+. ..+
T Consensus 226 ~~~l~~~-G~~v~~~~~~~~-~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~ 298 (325)
T cd08271 226 APTLAFN-GHLVCIQGRPDA-S-P--DPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIE 298 (325)
T ss_pred HHhhccC-CEEEEEcCCCCC-c-c--hhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cce
Confidence 9999996 999999754321 1 1 111112333332222111 011235678888888886543 447
Q ss_pred eeecchHHHHHHHhhCCCee-EEEEec
Q 025264 228 NMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 228 ~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
.|+++++.++++.+.++... |+++++
T Consensus 299 ~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 299 VLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred EEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 89999999999999877766 888763
No 124
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=2e-24 Score=178.34 Aligned_cols=237 Identities=22% Similarity=0.302 Sum_probs=180.0
Q ss_pred CCCCCCccccCCcccccccC---ccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEc
Q 025264 2 MNDRKSRFSINGKPIYHFMG---TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG 78 (255)
Q Consensus 2 ~g~~~~~~~~~g~~v~~~~~---~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G 78 (255)
.|+++..+++ ||+|+++.. .|+|++|+.++.+.++++|++++.++++.+++++.+||+++.+..+++++++|+|+|
T Consensus 73 ~G~~v~~~~~-Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g 151 (319)
T cd08267 73 VGSGVTRFKV-GDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLING 151 (319)
T ss_pred eCCCCCCCCC-CCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence 3567778888 999987653 589999999999999999999999999999999999999987777899999999999
Q ss_pred C-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHH-HHH
Q 025264 79 L-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVS-VMR 155 (255)
Q Consensus 79 ~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~-~~~ 155 (255)
+ |++|++++++++..|+ +|++++++ ++.+.++++|++.+++... .++. ...+.+ ++|++++|+++.. ...
T Consensus 152 ~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~~~~~~~~~d~vi~~~~~~~~~~~ 224 (319)
T cd08267 152 ASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---ALTAGGEKYDVIFDAVGNSPFSLY 224 (319)
T ss_pred CCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---hhccCCCCCcEEEECCCchHHHHH
Confidence 7 9999999999999999 99998865 8888889999988887765 4443 334445 8999999998532 234
Q ss_pred HHHHHhccCCceEEEEccCCCCCcccc---CchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecc
Q 025264 156 AALECCHKGWGTSVIVGVAASGQEIST---RPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLG 232 (255)
Q Consensus 156 ~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (255)
..+..++++ |+++.+|.......... ..........+....... ..+.+.++++++.++.+.+ .+.++|+++
T Consensus 225 ~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~--~~~~~~~~~ 299 (319)
T cd08267 225 RASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQLAELVEEGKLKP--VIDSVYPLE 299 (319)
T ss_pred HhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHHHHHHHHHCCCeee--eeeeEEcHH
Confidence 444458996 99999987543222111 111122223333222211 2467888999999988643 356789999
Q ss_pred hHHHHHHHhhCCCee-EEEE
Q 025264 233 EINEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 233 ~~~~a~~~~~~~~~~-k~vi 251 (255)
++++|++.+.++... |+++
T Consensus 300 ~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 300 DAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHHHHhcCCCCCcEeC
Confidence 999999999876655 7663
No 125
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=5.5e-24 Score=177.02 Aligned_cols=242 Identities=19% Similarity=0.295 Sum_probs=189.4
Q ss_pred CCCCCccccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-Ch
Q 025264 3 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GT 81 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~ 81 (255)
|.++.+++. |++|+++...|+|++|+.++...++++|+.+++++++.+++++.+||+++.....++++++|+|+|+ |+
T Consensus 72 g~~~~~~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~ 150 (337)
T cd08275 72 GEGVKDFKV-GDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGG 150 (337)
T ss_pred CCCCcCCCC-CCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcch
Confidence 556677888 9999987666999999999999999999999999999999999999999888899999999999997 99
Q ss_pred HHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHH
Q 025264 82 VGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALEC 160 (255)
Q Consensus 82 vG~~a~~l~~~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~ 160 (255)
+|++++++++.. +. .++.. ..+++.+.++++|++.+++... .++.+.++..+++++|+++||+|+.. ....+++
T Consensus 151 ~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~ 225 (337)
T cd08275 151 VGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDYRT--QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDL 225 (337)
T ss_pred HHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeCCC--CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHh
Confidence 999999999998 33 33322 2345788888899988888876 77888888777558999999999876 8899999
Q ss_pred hccCCceEEEEccCCCCCcccc---------------Cchh-hccCcEEEEeeeCCCCc-----cCcHHHHHHHHHcCCC
Q 025264 161 CHKGWGTSVIVGVAASGQEIST---------------RPFQ-LVTGRVWKGTAFGGFKS-----RSQVPWLVDKYMKKEI 219 (255)
Q Consensus 161 l~~~~G~~v~~g~~~~~~~~~~---------------~~~~-~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~ 219 (255)
++++ |+++.+|.......... .... +.++.++.++....... ...+.++++++.++.+
T Consensus 226 l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (337)
T cd08275 226 LKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKI 304 (337)
T ss_pred hccC-cEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCC
Confidence 9996 99999987532111111 1112 33488888776542211 1235678888888886
Q ss_pred CCCCcceeeeecchHHHHHHHhhCCCee-EEEEec
Q 025264 220 KVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 253 (255)
Q Consensus 220 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi~~ 253 (255)
.+. ....|++++++++++.+.++... |+++++
T Consensus 305 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 305 KPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred CCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 543 45789999999999999877666 988864
No 126
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.92 E-value=9.9e-24 Score=173.22 Aligned_cols=229 Identities=19% Similarity=0.257 Sum_probs=182.9
Q ss_pred CCCCCccccCCccccccc---CccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC
Q 025264 3 NDRKSRFSINGKPIYHFM---GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL 79 (255)
Q Consensus 3 g~~~~~~~~~g~~v~~~~---~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~ 79 (255)
|+++..+++ |++|+++. ..|+|++|+.++...++++|+++++.+++.+++.+.+|++++.+...+.++++|+|+|+
T Consensus 75 G~~~~~~~~-G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~ 153 (309)
T cd05289 75 GPGVTGFKV-GDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGA 153 (309)
T ss_pred CCCCCCCCC-CCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecC
Confidence 455667788 99998764 25899999999999999999999999999999999999999877777999999999997
Q ss_pred -ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHH
Q 025264 80 -GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAA 157 (255)
Q Consensus 80 -g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~ 157 (255)
|.+|++++++++..|+ +|+++++++ +.+.++++|++.+++... .++.+ .+.+ ++|+++|++++.. ....
T Consensus 154 ~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~----~~~~~~~d~v~~~~~~~~-~~~~ 224 (309)
T cd05289 154 AGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTK--GDFER----AAAPGGVDAVLDTVGGET-LARS 224 (309)
T ss_pred CchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh----ccCCCCceEEEECCchHH-HHHH
Confidence 9999999999999999 899988777 888888899888887665 44443 3334 8999999999886 8999
Q ss_pred HHHhccCCceEEEEccCCCCCccccCchhhccCcEEEEeeeCCCCccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHH
Q 025264 158 LECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEA 237 (255)
Q Consensus 158 ~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 237 (255)
+++++++ |+++.+|..... .. ..+.++.++....+... .+.+.+++++++++.+.+ .+.++|++++++++
T Consensus 225 ~~~l~~~-g~~v~~g~~~~~--~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a 294 (309)
T cd05289 225 LALVKPG-GRLVSIAGPPPA--EQ---AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLRP--VVDRVFPLEDAAEA 294 (309)
T ss_pred HHHHhcC-cEEEEEcCCCcc--hh---hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEEE--eeccEEcHHHHHHH
Confidence 9999996 999999875321 11 22233556655544322 357888999999988543 35678999999999
Q ss_pred HHHhhCCCee-EEEE
Q 025264 238 FRYMHGGDCL-RCVL 251 (255)
Q Consensus 238 ~~~~~~~~~~-k~vi 251 (255)
++.+..+... |+++
T Consensus 295 ~~~~~~~~~~~kvv~ 309 (309)
T cd05289 295 HERLESGHARGKVVL 309 (309)
T ss_pred HHHHHhCCCCCcEeC
Confidence 9998876655 7663
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.84 E-value=4.1e-20 Score=132.94 Aligned_cols=127 Identities=29% Similarity=0.445 Sum_probs=113.5
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHH
Q 025264 81 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 159 (255)
Q Consensus 81 ~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~ 159 (255)
++|++++|+|+..|+ +|+++++++++++.++++|+++++++++ .++.+.+++.+++ ++|+||||+|.+..++..++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999997 9999999999999999999999999998 8899999999998 99999999997777999999
Q ss_pred HhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHHHHHHHHH
Q 025264 160 CCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYM 215 (255)
Q Consensus 160 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~ 215 (255)
+++++ |+++.+|... ....+++...++. +.++.|+..++ .++++++++++.
T Consensus 78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la 129 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA 129 (130)
T ss_dssp HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence 99997 9999999975 4566777777766 99999998664 367888888775
No 128
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.62 E-value=2.6e-14 Score=119.95 Aligned_cols=176 Identities=15% Similarity=0.170 Sum_probs=135.0
Q ss_pred hhhHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhh
Q 025264 58 GLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 136 (255)
Q Consensus 58 a~~~l~~~~~-~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~ 136 (255)
.+.++.+... ..+|++|+|.|+|++|+.+++.++..|+ +|++++.++.+.+.+++.|++.+ + ..+.+
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v--- 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV--- 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH---
Confidence 3445555544 3689999999999999999999999999 99999999999999999998533 1 11222
Q ss_pred cCCCccEEEecCCcHHHHHHH-HHHhccCCceEEEEccCCCCCccccCchhhcc-CcEEEEeeeCCCCccCcHH--HHHH
Q 025264 137 TDGGVDYSFECIGNVSVMRAA-LECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVP--WLVD 212 (255)
Q Consensus 137 ~~~~~d~v~d~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~--~~~~ 212 (255)
.++|+|++|+|.+..+... ++.++++ |+++.+|.. ...++...+.. ++++.++..... ...++ ..++
T Consensus 256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~ 326 (413)
T cd00401 256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRII 326 (413)
T ss_pred --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhh
Confidence 1589999999998877765 9999997 999999863 33566666655 888887754321 12445 6899
Q ss_pred HHHcCCC-CCCCcceee-----eecc-hHHHHHHHhhCCCe--eEEEEecC
Q 025264 213 KYMKKEI-KVDEYVTHN-----MTLG-EINEAFRYMHGGDC--LRCVLKMQ 254 (255)
Q Consensus 213 ~~~~~~~-~~~~~~~~~-----~~~~-~~~~a~~~~~~~~~--~k~vi~~~ 254 (255)
++.+|++ ++...+.+. ++|+ |+.++++.+.++.. .|+++.+.
T Consensus 327 LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 327 LLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 9999998 777777777 8899 99999998877653 38877653
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.49 E-value=9.3e-13 Score=113.37 Aligned_cols=154 Identities=17% Similarity=0.196 Sum_probs=111.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEE-eCCCCCC-----------chHHHHHHh
Q 025264 68 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHD-----------KPIQQVLVD 135 (255)
Q Consensus 68 ~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~-----------~~~~~~i~~ 135 (255)
..++++|+|+|+|++|+++++.|+.+|+ +|++++.++++++.++++|++.+ +|..+.+ .++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4589999999999999999999999999 99999999999999999999854 6654310 133333333
Q ss_pred h-cC--CCccEEEecCCc-----HHH-HHHHHHHhccCCceEEEEccCCCCC-ccccCchhhc--cCcEEEEeeeCCCCc
Q 025264 136 L-TD--GGVDYSFECIGN-----VSV-MRAALECCHKGWGTSVIVGVAASGQ-EISTRPFQLV--TGRVWKGTAFGGFKS 203 (255)
Q Consensus 136 ~-~~--~~~d~v~d~~g~-----~~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~--~~~~~~g~~~~~~~~ 203 (255)
. ++ +++|++|+|++. +.. .++.++.++++ |+++.+|...++. ..+.+...++ +++++.|.+- +.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc-
Confidence 2 33 269999999996 334 39999999997 9999999853322 2344434443 4888888752 22
Q ss_pred cCcHHHHHHHHHcCCCCCCCcce
Q 025264 204 RSQVPWLVDKYMKKEIKVDEYVT 226 (255)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~ 226 (255)
.+....+.+++.++.+++.+.+.
T Consensus 317 ~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred hhHHHHHHHHHHhCCccHHHHhc
Confidence 23344688888888876554443
No 130
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.43 E-value=5e-14 Score=100.69 Aligned_cols=120 Identities=22% Similarity=0.298 Sum_probs=77.0
Q ss_pred cCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCC--cHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhccCc
Q 025264 114 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG--NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR 191 (255)
Q Consensus 114 ~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 191 (255)
+|+++++|+++ +++ ...+++|+|||++| .+..+..+++++ ++ |+++.++. ....+.. .....
T Consensus 1 LGAd~vidy~~--~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~----~~~~~~~--~~~~~ 64 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG----DLPSFAR--RLKGR 64 (127)
T ss_dssp CT-SEEEETTC--SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S----HHHHHHH--HHHCH
T ss_pred CCcCEEecCCC--ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC----cccchhh--hhccc
Confidence 68999999987 766 21238999999999 666347777888 96 99999974 0001111 11122
Q ss_pred EEEEeeeCCCC----ccCcHHHHHHHHHcCCCCCCCcceeeeecchHHHHHHHhhCCCee-EEEE
Q 025264 192 VWKGTAFGGFK----SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 251 (255)
Q Consensus 192 ~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-k~vi 251 (255)
.+....+.... ..+.++++.+++++|++++ .+.++||++++++|++.+++++.. |+||
T Consensus 65 ~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~--~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 65 SIRYSFLFSVDPNAIRAEALEELAELVAEGKLKP--PIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEE--eeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 23333322111 2245899999999999655 478899999999999999999877 9986
No 131
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.91 E-value=9.8e-09 Score=83.08 Aligned_cols=163 Identities=20% Similarity=0.278 Sum_probs=100.5
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCCcchHHHHHhc----CCcEEeCCCCCCchHHHHHHhhcCC
Q 025264 65 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG 139 (255)
Q Consensus 65 ~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~-~v~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~i~~~~~~ 139 (255)
...++++++||.+|+|+ |..+.++++..|.. +|++++.+++..+.+++. +...+- ... .++ +.+ .+.++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~--~d~-~~l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRL--GEI-EAL-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEE--cch-hhC-CCCCC
Confidence 45688999999999987 88888888887753 699999999988888653 332221 111 222 111 12233
Q ss_pred CccEEEecC------CcHHHHHHHHHHhccCCceEEEEccCCCCCccccCchhhccCcEEEEeeeCCCCccCcHHHHHHH
Q 025264 140 GVDYSFECI------GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDK 213 (255)
Q Consensus 140 ~~d~v~d~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 213 (255)
.||+|+... ..+..++.+.+.|+++ |+++..+..... . ++ ..+.....+.+...... ....++.++
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~--~~-~~~~~~~~~~~~~~~~~---~~~~e~~~~ 217 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-E--LP-EEIRNDAELYAGCVAGA---LQEEEYLAM 217 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-C--CC-HHHHHhHHHHhccccCC---CCHHHHHHH
Confidence 799998543 3345689999999997 999987764322 1 11 11112222222211211 245666677
Q ss_pred HHc-CCCCCCCcceeeeecchHHHHHHHh
Q 025264 214 YMK-KEIKVDEYVTHNMTLGEINEAFRYM 241 (255)
Q Consensus 214 ~~~-~~~~~~~~~~~~~~~~~~~~a~~~~ 241 (255)
+++ |...........++++++.++++.+
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHh
Confidence 765 4333333334568899999999988
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.82 E-value=4.6e-08 Score=84.44 Aligned_cols=106 Identities=21% Similarity=0.320 Sum_probs=80.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEE-eCCCCC-----------CchHHHHHHhh
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH-----------DKPIQQVLVDL 136 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~-----------~~~~~~~i~~~ 136 (255)
.++++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.++++|++.+ ++..+. .+++.+...+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 367899999999999999999999999 89999999999999999998763 332110 02333333333
Q ss_pred cC--C-CccEEEecC---CcHH---HHHHHHHHhccCCceEEEEccCCC
Q 025264 137 TD--G-GVDYSFECI---GNVS---VMRAALECCHKGWGTSVIVGVAAS 176 (255)
Q Consensus 137 ~~--~-~~d~v~d~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~ 176 (255)
.. . ++|++|+|+ |.+. ..++.++.++++ +.++.++...+
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCC
Confidence 32 2 799999999 5433 468889999997 99999976544
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.72 E-value=5.3e-07 Score=76.51 Aligned_cols=104 Identities=25% Similarity=0.315 Sum_probs=80.0
Q ss_pred hhhhHHHhhcCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHh
Q 025264 57 TGLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 135 (255)
Q Consensus 57 ta~~~l~~~~~~~-~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~ 135 (255)
.+|.++.+...+. .|++|+|.|.|.+|..+++.++.+|+ +|+++++++.+...+...|+. +. ++.+.+.
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~-------~l~eal~- 266 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM-------TMEEAAE- 266 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec-------CHHHHHh-
Confidence 3455554543544 89999999999999999999999999 999999988887766666764 22 1222222
Q ss_pred hcCCCccEEEecCCcHHHHH-HHHHHhccCCceEEEEccCC
Q 025264 136 LTDGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 136 ~~~~~~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 175 (255)
++|++++++|....+. ..+..++++ +.++..|...
T Consensus 267 ----~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 267 ----LGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred ----CCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 5899999999887675 688889996 8999888754
No 134
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.63 E-value=1e-06 Score=71.92 Aligned_cols=95 Identities=21% Similarity=0.302 Sum_probs=75.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
.+++|+|+|.|.+|+.+++.++.+|+ +|+++++++++.+.++++|++.+ .. .++.+.+. .+|+||+|+.
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~l~~~l~-----~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SELAEEVG-----KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HHHHHHhC-----CCCEEEECCC
Confidence 68999999999999999999999999 99999999988888888887533 11 22322222 5999999987
Q ss_pred cHHHHHHHHHHhccCCceEEEEccCCC
Q 025264 150 NVSVMRAALECCHKGWGTSVIVGVAAS 176 (255)
Q Consensus 150 ~~~~~~~~~~~l~~~~G~~v~~g~~~~ 176 (255)
.....+..++.++++ +.++.++...+
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pg 245 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPG 245 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCC
Confidence 665456778889996 99999977543
No 135
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.61 E-value=1e-06 Score=74.32 Aligned_cols=101 Identities=25% Similarity=0.342 Sum_probs=78.0
Q ss_pred hhHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhc
Q 025264 59 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 137 (255)
Q Consensus 59 ~~~l~~~~~-~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~ 137 (255)
+.++.+... ...|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...++..|+. +.+ ..+.++
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal~--- 249 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAAK--- 249 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHHh---
Confidence 344444434 4689999999999999999999999999 999999888877777777763 221 222222
Q ss_pred CCCccEEEecCCcHHHHHH-HHHHhccCCceEEEEccC
Q 025264 138 DGGVDYSFECIGNVSVMRA-ALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 138 ~~~~d~v~d~~g~~~~~~~-~~~~l~~~~G~~v~~g~~ 174 (255)
+.|++++++|.+..+.. .+..++++ +.++.+|..
T Consensus 250 --~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~ 284 (406)
T TIGR00936 250 --IGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF 284 (406)
T ss_pred --cCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence 57999999999887764 88889996 899988875
No 136
>PLN02494 adenosylhomocysteinase
Probab=98.47 E-value=2.5e-06 Score=72.79 Aligned_cols=101 Identities=26% Similarity=0.325 Sum_probs=79.8
Q ss_pred hhHHHhhcCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhc
Q 025264 59 LGAVWNTAKV-EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 137 (255)
Q Consensus 59 ~~~l~~~~~~-~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~ 137 (255)
+.++.+...+ ..|++|+|.|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+..+ ++.+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHHHHHh---
Confidence 4445555444 679999999999999999999999999 99999998887777777776521 1222332
Q ss_pred CCCccEEEecCCcHHH-HHHHHHHhccCCceEEEEccC
Q 025264 138 DGGVDYSFECIGNVSV-MRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 138 ~~~~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~ 174 (255)
..|+++++.|.... ....+..++++ +.++.+|..
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 48999999998874 38899999997 999999874
No 137
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.47 E-value=8.3e-07 Score=73.12 Aligned_cols=108 Identities=20% Similarity=0.210 Sum_probs=79.7
Q ss_pred CceEEcCCCCCcccccccccchhhhhhHHHhhcCC----CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchH-
Q 025264 34 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKV----EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF- 108 (255)
Q Consensus 34 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~- 108 (255)
..++++|+.++.+.++... +.++++.++ +.+.. .++.+|+|.|+|.+|..+++.++..|+.+|+++.+++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 4567889989888877765 677777765 33332 4789999999999999999999988876899999988775
Q ss_pred HHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHHH
Q 025264 109 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 153 (255)
Q Consensus 109 ~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~ 153 (255)
++++++|.. +++. .++.+.+. .+|+||.|++.+..
T Consensus 217 ~la~~~g~~-~~~~----~~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPL----DELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeH----HHHHHHHh-----cCCEEEECCCCCch
Confidence 556778873 3322 22333332 48999999998773
No 138
>PRK08324 short chain dehydrogenase; Validated
Probab=98.25 E-value=8.5e-06 Score=74.38 Aligned_cols=138 Identities=24% Similarity=0.316 Sum_probs=88.0
Q ss_pred cceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 025264 23 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 101 (255)
Q Consensus 23 g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~ 101 (255)
-++++|..+++..++.+ +..+.+++..-.. ...+..+++++||+|+ |++|..+++.+...|+ +|+++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~ 452 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLA 452 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEE
Confidence 46678888887777777 5566666542110 0122346789999997 9999999999999999 99999
Q ss_pred cCCcchHHHHH-hcCC----c-EEeCCCCCCchHHHHHHhhc--CCCccEEEecCCc-----------------------
Q 025264 102 DIDPKKFDRAK-NFGV----T-EFVNPKDHDKPIQQVLVDLT--DGGVDYSFECIGN----------------------- 150 (255)
Q Consensus 102 ~~~~~~~~~~~-~~g~----~-~vi~~~~~~~~~~~~i~~~~--~~~~d~v~d~~g~----------------------- 150 (255)
++++++.+.+. +++. . ...|..+ +..+.+.+.+.. .+++|+++++.|.
T Consensus 453 ~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 453 DLDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred eCCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99887766553 3432 1 1234333 122333333321 2379999999982
Q ss_pred --HHHHHHHHHHhcc---CCceEEEEccC
Q 025264 151 --VSVMRAALECCHK---GWGTSVIVGVA 174 (255)
Q Consensus 151 --~~~~~~~~~~l~~---~~G~~v~~g~~ 174 (255)
...++.+++.++. + |+++.++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1123444555555 4 789998774
No 139
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.23 E-value=1.5e-05 Score=68.21 Aligned_cols=100 Identities=22% Similarity=0.304 Sum_probs=76.3
Q ss_pred hHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcC
Q 025264 60 GAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD 138 (255)
Q Consensus 60 ~~l~~~~~-~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~ 138 (255)
.++.+... .-.|++|+|.|.|.+|..+++.++..|+ +|+++++++.+...+...|+.. .++.+.++
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~--------~~leell~---- 308 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV--------VTLEDVVE---- 308 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee--------ccHHHHHh----
Confidence 44444433 4578999999999999999999999999 9999988877765555556542 12323332
Q ss_pred CCccEEEecCCcHHHH-HHHHHHhccCCceEEEEccC
Q 025264 139 GGVDYSFECIGNVSVM-RAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 139 ~~~d~v~d~~g~~~~~-~~~~~~l~~~~G~~v~~g~~ 174 (255)
..|+|+.++|....+ ...+..++++ +.++.+|-.
T Consensus 309 -~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 309 -TADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred -cCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence 589999999987766 4899999997 999999875
No 140
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.20 E-value=2.2e-05 Score=63.84 Aligned_cols=110 Identities=22% Similarity=0.317 Sum_probs=77.0
Q ss_pred chhhhhhHHHhhc---CC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchH
Q 025264 54 GVPTGLGAVWNTA---KV-EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI 129 (255)
Q Consensus 54 ~~~ta~~~l~~~~---~~-~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 129 (255)
+..+|.+++.... .+ -.+++++|.|.|.+|.++++.++..|+ +|++..+++++.+.+.+.|...+ .. .++
T Consensus 130 ~~~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~----~~l 203 (287)
T TIGR02853 130 SIPTAEGAIMMAIEHTDFTIHGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL----NKL 203 (287)
T ss_pred cHhHHHHHHHHHHHhcCCCCCCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH----HHH
Confidence 4556655542222 11 257899999999999999999999999 99999999888777777775422 11 223
Q ss_pred HHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCC
Q 025264 130 QQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 130 ~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
.+.+. .+|+|++++.....-...+..++++ ..++.++...
T Consensus 204 ~~~l~-----~aDiVint~P~~ii~~~~l~~~k~~-aliIDlas~P 243 (287)
T TIGR02853 204 EEKVA-----EIDIVINTIPALVLTADVLSKLPKH-AVIIDLASKP 243 (287)
T ss_pred HHHhc-----cCCEEEECCChHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence 22222 5899999987654235667778886 8888887643
No 141
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.20 E-value=1.5e-05 Score=67.16 Aligned_cols=97 Identities=21% Similarity=0.241 Sum_probs=69.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 71 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 71 ~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
+.+|+|.|+|.+|+.+++.++.+|+ +|+++++++++.+.+. .++........+ +.++.+.+. .+|++++|++
T Consensus 167 ~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~~~l~~~l~-----~aDvVI~a~~ 239 (370)
T TIGR00518 167 PGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-AYEIEDAVK-----RADLLIGAVL 239 (370)
T ss_pred CceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-HHHHHHHHc-----cCCEEEEccc
Confidence 4569999999999999999999999 8999999988877774 455432222221 123333332 5899999973
Q ss_pred ---c--HH-HHHHHHHHhccCCceEEEEccCC
Q 025264 150 ---N--VS-VMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 150 ---~--~~-~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
. +. ..+..++.++++ +.++.++...
T Consensus 240 ~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~ 270 (370)
T TIGR00518 240 IPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQ 270 (370)
T ss_pred cCCCCCCcCcCHHHHhcCCCC-CEEEEEecCC
Confidence 2 21 136777889997 9999987654
No 142
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.19 E-value=1.1e-05 Score=61.50 Aligned_cols=116 Identities=20% Similarity=0.201 Sum_probs=80.9
Q ss_pred CCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcch----HHHHHhcCCcE
Q 025264 43 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK----FDRAKNFGVTE 118 (255)
Q Consensus 43 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~----~~~~~~~g~~~ 118 (255)
++....-.++-+...|. |.+...++++++||-+|+|+ |..++-+++..| +|+.+.+.++= ++.++.+|...
T Consensus 47 lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~n 121 (209)
T COG2518 47 LPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYEN 121 (209)
T ss_pred ccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCc
Confidence 33334444444555554 55888999999999999975 889999999887 89999988773 33346678654
Q ss_pred Ee-CCCCCCchHHHHHHhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEE
Q 025264 119 FV-NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 119 vi-~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
|. ...| --.-+... +||.|+-+.+.+..-+..++.|+++ |+++..
T Consensus 122 V~v~~gD-------G~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 122 VTVRHGD-------GSKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred eEEEECC-------cccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 32 2222 11222333 8999998888777457889999997 887655
No 143
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.14 E-value=1.7e-05 Score=63.30 Aligned_cols=141 Identities=22% Similarity=0.284 Sum_probs=87.5
Q ss_pred cccCCcccccccCccceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHH
Q 025264 9 FSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAE 88 (255)
Q Consensus 9 ~~~~g~~v~~~~~~g~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~ 88 (255)
+.+ |++++.. .+|.+|.. +...++++++++++..+. .+.+.. ....+. ..+.++++||..|+|. |..++.
T Consensus 67 ~~~-g~~~~i~---p~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~ 136 (250)
T PRK00517 67 IRI-GDRLWIV---PSWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIA 136 (250)
T ss_pred EEE-cCCEEEE---CCCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHH
Confidence 444 5544432 35666644 667788898888877654 221111 111121 1256889999999987 877776
Q ss_pred HHHHcCCCeEEEEcCCcchHHHHHhc----CCcEEeCCCCCCchHHHHHHhhcCC-CccEEEecCCcHH---HHHHHHHH
Q 025264 89 GAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVS---VMRAALEC 160 (255)
Q Consensus 89 l~~~~g~~~v~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d~~g~~~---~~~~~~~~ 160 (255)
++ ..|+.+|++++.++...+.+++. +....+... .+. .||+|+-+..... .++.+.+.
T Consensus 137 ~~-~~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~-------------~~~~~fD~Vvani~~~~~~~l~~~~~~~ 202 (250)
T PRK00517 137 AA-KLGAKKVLAVDIDPQAVEAARENAELNGVELNVYLP-------------QGDLKADVIVANILANPLLELAPDLARL 202 (250)
T ss_pred HH-HcCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEc-------------cCCCCcCEEEEcCcHHHHHHHHHHHHHh
Confidence 54 46775699999999888877542 221101100 011 5999986555432 35678888
Q ss_pred hccCCceEEEEccC
Q 025264 161 CHKGWGTSVIVGVA 174 (255)
Q Consensus 161 l~~~~G~~v~~g~~ 174 (255)
|+++ |+++..|..
T Consensus 203 Lkpg-G~lilsgi~ 215 (250)
T PRK00517 203 LKPG-GRLILSGIL 215 (250)
T ss_pred cCCC-cEEEEEECc
Confidence 9997 999987664
No 144
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.08 E-value=4.5e-06 Score=74.52 Aligned_cols=80 Identities=26% Similarity=0.324 Sum_probs=59.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---------------------cchHHHHHhcCCcEEeCCCCC
Q 025264 67 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---------------------PKKFDRAKNFGVTEFVNPKDH 125 (255)
Q Consensus 67 ~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~---------------------~~~~~~~~~~g~~~vi~~~~~ 125 (255)
.+++|++|+|.|+|+.|+++++.++..|+ +|++++.. ..+.+.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 89999843 245566788998877764320
Q ss_pred CchH-HHHHHhhcCCCccEEEecCCcHH
Q 025264 126 DKPI-QQVLVDLTDGGVDYSFECIGNVS 152 (255)
Q Consensus 126 ~~~~-~~~i~~~~~~~~d~v~d~~g~~~ 152 (255)
.+. .+.+. .++|+||+++|...
T Consensus 212 -~~~~~~~~~----~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 -EDITLEQLE----GEFDAVFVAIGAQL 234 (564)
T ss_pred -CcCCHHHHH----hhCCEEEEeeCCCC
Confidence 111 11221 26999999999754
No 145
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.06 E-value=8.6e-06 Score=70.01 Aligned_cols=105 Identities=17% Similarity=0.193 Sum_probs=69.6
Q ss_pred EEcCCCCCcccccccccchhhhhhHHHhhcC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHH-HHH
Q 025264 37 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK---VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAK 112 (255)
Q Consensus 37 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~-~~~ 112 (255)
+++|..+..+.+ ....+.+.+++++..... -.++.+|+|.|+|.+|.++++.++..|+.+|+++.+++++.+ +++
T Consensus 146 ~~~~k~v~~~t~-i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~ 224 (423)
T PRK00045 146 FSVAKRVRTETG-IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAE 224 (423)
T ss_pred HHHHhhHhhhcC-CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH
Confidence 444554443332 222355666666533222 257799999999999999999999999868999999888765 557
Q ss_pred hcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHH
Q 025264 113 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 152 (255)
Q Consensus 113 ~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~ 152 (255)
++|.+ +++. .++.+.+. ++|+|++|++.+.
T Consensus 225 ~~g~~-~~~~----~~~~~~l~-----~aDvVI~aT~s~~ 254 (423)
T PRK00045 225 EFGGE-AIPL----DELPEALA-----EADIVISSTGAPH 254 (423)
T ss_pred HcCCc-EeeH----HHHHHHhc-----cCCEEEECCCCCC
Confidence 77754 3322 22222222 5899999999755
No 146
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.00 E-value=2.3e-05 Score=56.36 Aligned_cols=74 Identities=23% Similarity=0.317 Sum_probs=54.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCc--EEeCCCCCCchHHHHHHhhcCCCccEEEe
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFE 146 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~--~vi~~~~~~~~~~~~i~~~~~~~~d~v~d 146 (255)
++.+++|.|+|++|.+++..+...|+++|+++.|+.++.+.+ ++++.. .+++.. ++.+.+. .+|+|++
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~~~~~-----~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLEEALQ-----EADIVIN 81 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHCHHHH-----TESEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHHHHHh-----hCCeEEE
Confidence 578999999999999999999999997799999999887776 445322 233332 2222222 5999999
Q ss_pred cCCcHH
Q 025264 147 CIGNVS 152 (255)
Q Consensus 147 ~~g~~~ 152 (255)
|++.+.
T Consensus 82 aT~~~~ 87 (135)
T PF01488_consen 82 ATPSGM 87 (135)
T ss_dssp -SSTTS
T ss_pred ecCCCC
Confidence 988764
No 147
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.99 E-value=4.8e-05 Score=59.08 Aligned_cols=79 Identities=18% Similarity=0.305 Sum_probs=59.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCC----cEEeCCCCCCchHHHHHHhhcCC--Cc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV----TEFVNPKDHDKPIQQVLVDLTDG--GV 141 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~----~~vi~~~~~~~~~~~~i~~~~~~--~~ 141 (255)
+++.++|+|+ +++|.+.++.+...|+ +|+.+.|+.++++.+ .+++. ...+|-.+ .......+...... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 4578999998 8999999999999999 999999999999988 45662 23355544 12444445544444 69
Q ss_pred cEEEecCCc
Q 025264 142 DYSFECIGN 150 (255)
Q Consensus 142 d~v~d~~g~ 150 (255)
|+.+++.|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999998884
No 148
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.90 E-value=9.3e-05 Score=62.72 Aligned_cols=112 Identities=20% Similarity=0.251 Sum_probs=76.2
Q ss_pred cccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHH
Q 025264 51 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQ 130 (255)
Q Consensus 51 ~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 130 (255)
+..+....+..+.+...++++++||.+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-+.... .++.
T Consensus 148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~~ 223 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDYR 223 (383)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cchh
Confidence 333444455556677889999999999986 47788888988899 9999999999999887643211111111 2221
Q ss_pred HHHHhhcCCCccEEEe-----cCCc---HHHHHHHHHHhccCCceEEEEc
Q 025264 131 QVLVDLTDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVIVG 172 (255)
Q Consensus 131 ~~i~~~~~~~~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g 172 (255)
+. .+.||.|+. .+|. +..++.+.+.|+++ |+++...
T Consensus 224 ----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 224 ----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred ----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 11 237998864 3343 23478888899997 9888754
No 149
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.84 E-value=0.00029 Score=56.11 Aligned_cols=80 Identities=20% Similarity=0.288 Sum_probs=57.3
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hc----CCc-EE--eCCCCCCchHHHHHH-hhc
Q 025264 68 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVT-EF--VNPKDHDKPIQQVLV-DLT 137 (255)
Q Consensus 68 ~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~----g~~-~v--i~~~~~~~~~~~~i~-~~~ 137 (255)
...+.+++|+|| +++|...+..+...|. +++.+.|++++++.+. ++ |.. .+ +|..+ .+-.+.+. +..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~--~~~~~~l~~~l~ 79 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD--PEALERLEDELK 79 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC--hhHHHHHHHHHH
Confidence 346789999998 8999999999999999 9999999999988873 32 221 12 34443 33333333 222
Q ss_pred C-C-CccEEEecCCc
Q 025264 138 D-G-GVDYSFECIGN 150 (255)
Q Consensus 138 ~-~-~~d~v~d~~g~ 150 (255)
. + .+|+.++++|-
T Consensus 80 ~~~~~IdvLVNNAG~ 94 (265)
T COG0300 80 ERGGPIDVLVNNAGF 94 (265)
T ss_pred hcCCcccEEEECCCc
Confidence 2 2 79999999994
No 150
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.83 E-value=0.00035 Score=55.13 Aligned_cols=103 Identities=24% Similarity=0.343 Sum_probs=67.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hhc---CCcEEe--CCCCCCchHHHHHHhhcC--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTEFV--NPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~---g~~~vi--~~~~~~~~~~~~i~~~~~--~~ 140 (255)
++++|+|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++. +.-+.+ |..+ +..+.+.+.+... ++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4679999997 9999999999999999 999999988877665 222 221222 3222 1223322322211 26
Q ss_pred ccEEEecCCcHH-----------------------HHHHHHHHhccCCceEEEEccCC
Q 025264 141 VDYSFECIGNVS-----------------------VMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 141 ~d~v~d~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
+|.++.+.+... .++..+++++.+ |+++.++...
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 899998887421 144555667776 8999888653
No 151
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.80 E-value=0.00029 Score=53.30 Aligned_cols=93 Identities=25% Similarity=0.305 Sum_probs=65.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEE-eCCCCCCchHHHHHHhhcCCCccEEEecCCc-
Q 025264 74 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIGN- 150 (255)
Q Consensus 74 vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~- 150 (255)
|+|+|+ |.+|..+++.+...|. +|++++|++++.+. ..+.+.+ .|..+ . +.+.+... ++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~d--~---~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLFD--P---DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTTC--H---HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeehh--h---hhhhhhhh-hcchhhhhhhhh
Confidence 789998 9999999999999998 99999999998877 4455443 23332 3 23333322 69999999984
Q ss_pred ---HHHHHHHHHHhccC-CceEEEEccCC
Q 025264 151 ---VSVMRAALECCHKG-WGTSVIVGVAA 175 (255)
Q Consensus 151 ---~~~~~~~~~~l~~~-~G~~v~~g~~~ 175 (255)
.......++.++.. -.+++.++...
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccccccccceeeeccc
Confidence 22356666766553 13777776653
No 152
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.00024 Score=57.63 Aligned_cols=78 Identities=17% Similarity=0.260 Sum_probs=56.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEE-eCCCCCCchHHHHHH---hhcCCCccEE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLV---DLTDGGVDYS 144 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~i~---~~~~~~~d~v 144 (255)
.+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+.+.+ .|..+ +..+.+.+. +..++.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 4578999998 9999999999988999 99999999888887776665433 34443 122322233 2233479999
Q ss_pred EecCC
Q 025264 145 FECIG 149 (255)
Q Consensus 145 ~d~~g 149 (255)
+++.|
T Consensus 81 i~~Ag 85 (277)
T PRK05993 81 FNNGA 85 (277)
T ss_pred EECCC
Confidence 99876
No 153
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.77 E-value=0.00022 Score=58.23 Aligned_cols=97 Identities=24% Similarity=0.293 Sum_probs=63.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc----CCcE-EeCCCCCCchHHHHHHhhcCCCcc
Q 025264 68 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTE-FVNPKDHDKPIQQVLVDLTDGGVD 142 (255)
Q Consensus 68 ~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~----g~~~-vi~~~~~~~~~~~~i~~~~~~~~d 142 (255)
.+++++||-.|+|+ |..++.+++ .|+.+|++++.++...+.+++. +... +.... .+ ......+.||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~---~~----~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL---IY----LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cc----cccccCCCce
Confidence 46789999999987 777776665 5766999999998877777542 2211 11111 11 1111223799
Q ss_pred EEEecCCcH---HHHHHHHHHhccCCceEEEEccC
Q 025264 143 YSFECIGNV---SVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 143 ~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
+|+...... ..+..+.+.++++ |+++..|..
T Consensus 228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 999655433 2356778899997 999887753
No 154
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.76 E-value=0.00052 Score=52.80 Aligned_cols=102 Identities=25% Similarity=0.425 Sum_probs=69.2
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHH----hcC-CcEEeCCCCCCchHHHHHHhh
Q 025264 63 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFG-VTEFVNPKDHDKPIQQVLVDL 136 (255)
Q Consensus 63 ~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~----~~g-~~~vi~~~~~~~~~~~~i~~~ 136 (255)
.....+.++++|+..|+|+ |..++.+++..+. .+|++++.+++..+.++ ..| .+.+.... .+..+.+...
T Consensus 33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~~ 108 (198)
T PRK00377 33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFTI 108 (198)
T ss_pred HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhhc
Confidence 3567889999999999987 8888888887642 38999999998877664 355 23222111 2222222222
Q ss_pred cCCCccEEEecCCc---HHHHHHHHHHhccCCceEEE
Q 025264 137 TDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVI 170 (255)
Q Consensus 137 ~~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~ 170 (255)
.+.+|.||...+. ...++.+.+.|+++ |+++.
T Consensus 109 -~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~ 143 (198)
T PRK00377 109 -NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVI 143 (198)
T ss_pred -CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEE
Confidence 2379999975542 33477888899997 99875
No 155
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.72 E-value=0.00022 Score=53.92 Aligned_cols=77 Identities=21% Similarity=0.252 Sum_probs=56.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC---cEEeCCCCCCch-HHHHHHhhcCC--CccE
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---TEFVNPKDHDKP-IQQVLVDLTDG--GVDY 143 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~-~~~~i~~~~~~--~~d~ 143 (255)
|.+|||+|+ +++|++.++-....|- +||+..|++++.+.++.... ..+.|-.+ .+ ..+.+.++... ..++
T Consensus 5 gnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d--~~~~~~lvewLkk~~P~lNv 81 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD--RDSRRELVEWLKKEYPNLNV 81 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc--hhhHHHHHHHHHhhCCchhe
Confidence 578999976 8999999999999999 99999999999999876442 34445444 33 22223333333 5899
Q ss_pred EEecCCc
Q 025264 144 SFECIGN 150 (255)
Q Consensus 144 v~d~~g~ 150 (255)
++++.|-
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9998883
No 156
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.71 E-value=0.00065 Score=56.07 Aligned_cols=103 Identities=18% Similarity=0.223 Sum_probs=71.4
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHH----hcCCcEEeCCCCCCchHHHHHHhh
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL 136 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~i~~~ 136 (255)
+.+...++++++||..|+|. |..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+...+.
T Consensus 72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~~ 147 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPEF 147 (322)
T ss_pred HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhccccc
Confidence 34666788999999999984 9999999998763 26999999988666553 45654332212 2222222111
Q ss_pred cCCCccEEEecCCcHHHHHHHHHHhccCCceEEEE
Q 025264 137 TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 137 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
+.+|+|+.+.+.+......++.++++ |+++..
T Consensus 148 --~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 148 --APYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred --CCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 26999998888766466788899997 987764
No 157
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.70 E-value=0.00093 Score=50.93 Aligned_cols=100 Identities=21% Similarity=0.252 Sum_probs=63.6
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHhcCCcEE-eCCCCCCchHHHHHHhhcCC-Cc
Q 025264 65 TAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDG-GV 141 (255)
Q Consensus 65 ~~~~~~~~~vlI~G~g~vG~~a~~l~~~~-g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~i~~~~~~-~~ 141 (255)
...++++++||.+|+|+-+. +..+++.. +..+|++++.++.. +..+...+ .|..+ .+..+.+.+..++ ++
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~--~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD--EEVLNKIRERVGDDKV 99 (188)
T ss_pred hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC--hhHHHHHHHHhCCCCc
Confidence 45578999999999876444 44444443 43389999998754 11233322 23333 4444555555555 89
Q ss_pred cEEEe-cC----Cc------------HHHHHHHHHHhccCCceEEEEc
Q 025264 142 DYSFE-CI----GN------------VSVMRAALECCHKGWGTSVIVG 172 (255)
Q Consensus 142 d~v~d-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 172 (255)
|+|+. .. |. ...+..+.++|+++ |+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 99994 32 21 33578889999997 9988754
No 158
>PRK06182 short chain dehydrogenase; Validated
Probab=97.69 E-value=0.00027 Score=57.11 Aligned_cols=79 Identities=22% Similarity=0.339 Sum_probs=55.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEE-eCCCCCCchHHHHHHhhc--CCCccEEE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF 145 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~i~~~~--~~~~d~v~ 145 (255)
++++++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+...+ .|-.+ ++.+.+.+.+.. .+++|+++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 3578999997 9999999999988999 99999999887776655554432 34433 133333333322 13799999
Q ss_pred ecCCc
Q 025264 146 ECIGN 150 (255)
Q Consensus 146 d~~g~ 150 (255)
++.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99884
No 159
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.67 E-value=0.00084 Score=51.10 Aligned_cols=78 Identities=18% Similarity=0.257 Sum_probs=59.0
Q ss_pred CCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcCCc-EEeCCCCCCch---HHHHHHhhcCCCccE
Q 025264 71 GSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT-EFVNPKDHDKP---IQQVLVDLTDGGVDY 143 (255)
Q Consensus 71 ~~~vlI~G~--g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g~~-~vi~~~~~~~~---~~~~i~~~~~~~~d~ 143 (255)
.+.|||+|+ |++|.+++.-....|+ .|+++.|+-+.+..+. +.|.. .=+|-.+ +++ +..++++.+.|..|+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~-~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSK-PEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCC-hHHHHHHHHHHhhCCCCceEE
Confidence 468999985 8999999999999999 9999999999888875 77742 2244333 133 445667766678999
Q ss_pred EEecCCc
Q 025264 144 SFECIGN 150 (255)
Q Consensus 144 v~d~~g~ 150 (255)
.++..|.
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9998775
No 160
>PRK12742 oxidoreductase; Provisional
Probab=97.65 E-value=0.0017 Score=51.22 Aligned_cols=77 Identities=22% Similarity=0.252 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-CcchHHHH-HhcCCcEE-eCCCCCCchHHHHHHhhcCCCccEEE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 145 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~-~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~v~ 145 (255)
+++++||+|+ |++|..+++.+...|+ +|+.+.+ ++++.+.+ .+.+...+ .|..+ ...+.+.+.+. +++|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRKS--GALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHHh--CCCcEEE
Confidence 4689999997 9999999999999999 8887764 44444444 44555433 34332 12233333322 3699999
Q ss_pred ecCCc
Q 025264 146 ECIGN 150 (255)
Q Consensus 146 d~~g~ 150 (255)
++.|.
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 98874
No 161
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.64 E-value=0.001 Score=49.72 Aligned_cols=104 Identities=28% Similarity=0.343 Sum_probs=70.3
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcEEeCCCCCCchHHHHHHhhcCC
Q 025264 64 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDHDKPIQQVLVDLTDG 139 (255)
Q Consensus 64 ~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~i~~~~~~ 139 (255)
.+.+++||+.++=.|+|+ |..++++++..-..+|++++++++..+.. +++|.+.+.--. .+-.+.+.+..
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~---g~Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVE---GDAPEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEe---ccchHhhcCCC--
Confidence 556889999888789864 77788888544444999999999887776 457876432111 22223333221
Q ss_pred CccEEEecCCc--HHHHHHHHHHhccCCceEEEEccC
Q 025264 140 GVDYSFECIGN--VSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 140 ~~d~v~d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
.+|.+|---|. +..++.+|..|+++ |++|.-...
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait 137 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT 137 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence 59999953332 34588999999997 999876543
No 162
>PRK04148 hypothetical protein; Provisional
Probab=97.64 E-value=0.00039 Score=49.38 Aligned_cols=96 Identities=22% Similarity=0.260 Sum_probs=66.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEe
Q 025264 67 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 146 (255)
Q Consensus 67 ~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d 146 (255)
.-.++.++++.|.| .|...++.++..|. +|++++.+++..+.+++.+.+.+.+.-- ++++ .+- +++|+++.
T Consensus 13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~--~~y----~~a~liys 83 (134)
T PRK04148 13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL--EIY----KNAKLIYS 83 (134)
T ss_pred ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH--HHH----hcCCEEEE
Confidence 33456789999998 78766777778899 9999999999999998888765543221 0222 111 27999999
Q ss_pred cCCcHHHHHHHHHHhccCCceEEEE
Q 025264 147 CIGNVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 147 ~~g~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
.-..+.....++++.+.-+..++..
T Consensus 84 irpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 84 IRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred eCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 8888885556666655531344444
No 163
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00035 Score=56.49 Aligned_cols=77 Identities=23% Similarity=0.370 Sum_probs=55.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEE-eCCCCCCchHHHHHHhhcC--CCccEEEec
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSFEC 147 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~i~~~~~--~~~d~v~d~ 147 (255)
+++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ++.+.+.+..... +++|+++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 47899998 9999999999999999 99999998887777766565433 45443 1333333333322 379999999
Q ss_pred CCc
Q 025264 148 IGN 150 (255)
Q Consensus 148 ~g~ 150 (255)
.|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 883
No 164
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.61 E-value=0.00049 Score=59.16 Aligned_cols=76 Identities=18% Similarity=0.239 Sum_probs=57.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHH-HHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEE
Q 025264 67 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 145 (255)
Q Consensus 67 ~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~ 145 (255)
...++++|+|.|+|.+|..+++.++..|+.+|+++.++.++.+ +++++|.. .++. .++.+.+. ++|+||
T Consensus 176 ~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l~-----~aDvVi 245 (417)
T TIGR01035 176 GSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF----EDLEEYLA-----EADIVI 245 (417)
T ss_pred CCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHHh-----hCCEEE
Confidence 3467899999999999999999999999658999999888755 55677764 2221 22333332 599999
Q ss_pred ecCCcHH
Q 025264 146 ECIGNVS 152 (255)
Q Consensus 146 d~~g~~~ 152 (255)
+|++.+.
T Consensus 246 ~aT~s~~ 252 (417)
T TIGR01035 246 SSTGAPH 252 (417)
T ss_pred ECCCCCC
Confidence 9998755
No 165
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.61 E-value=0.0011 Score=48.54 Aligned_cols=99 Identities=24% Similarity=0.322 Sum_probs=64.5
Q ss_pred HHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC
Q 025264 61 AVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG 139 (255)
Q Consensus 61 ~l~~~~~-~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~ 139 (255)
++.+... .-.|++++|.|-|.+|...++.++.+|+ +|++++.+|.+.-.+..-|... ..+.+.+.
T Consensus 12 ~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v--------~~~~~a~~----- 77 (162)
T PF00670_consen 12 GIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV--------MTLEEALR----- 77 (162)
T ss_dssp HHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE--------E-HHHHTT-----
T ss_pred HHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe--------cCHHHHHh-----
Confidence 3434433 4578999999999999999999999999 9999999997777766667542 22333332
Q ss_pred CccEEEecCCcHHH-HHHHHHHhccCCceEEEEccC
Q 025264 140 GVDYSFECIGNVSV-MRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 140 ~~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~ 174 (255)
..|+++.++|.... -.+-++.|+.+ ..+..+|..
T Consensus 78 ~adi~vtaTG~~~vi~~e~~~~mkdg-ail~n~Gh~ 112 (162)
T PF00670_consen 78 DADIFVTATGNKDVITGEHFRQMKDG-AILANAGHF 112 (162)
T ss_dssp T-SEEEE-SSSSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred hCCEEEECCCCccccCHHHHHHhcCC-eEEeccCcC
Confidence 58999999998763 35778889995 666666653
No 166
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.59 E-value=0.0012 Score=53.12 Aligned_cols=110 Identities=21% Similarity=0.330 Sum_probs=72.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE-E----eCCCCCCchHHHHHHhhc--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F----VNPKDHDKPIQQVLVDLT-- 137 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v----i~~~~~~~~~~~~i~~~~-- 137 (255)
.++.|+|+|| +++|.+.+.-+...|+ +++.+++..++.+.+ ++.+... + .|-.+ .++..+.+.+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~-~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD-EESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC-HHHHHHHHHHHHHh
Confidence 4689999998 8999999988888999 888888888777666 3444322 2 12222 133333332221
Q ss_pred CCCccEEEecCCcHH-------------------------HHHHHHHHhccCC-ceEEEEccCCCCCccc
Q 025264 138 DGGVDYSFECIGNVS-------------------------VMRAALECCHKGW-GTSVIVGVAASGQEIS 181 (255)
Q Consensus 138 ~~~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~ 181 (255)
-|++|+.+++.|-.. ....++..|++.+ |+++.+++..+...++
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 237999999888421 2456677776533 8999998866544433
No 167
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.58 E-value=6.9e-05 Score=60.44 Aligned_cols=100 Identities=23% Similarity=0.332 Sum_probs=62.5
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-EE-eCCCCCCchHHHHHHh
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EF-VNPKDHDKPIQQVLVD 135 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~v-i~~~~~~~~~~~~i~~ 135 (255)
+.++.+++||++||-+|+| .|..+..+++..|+ +|++++.|++..+.++ +.|.. .+ +.. .++ ++
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~----~D~----~~ 123 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL----QDY----RD 123 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE----S-G----GG
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE----eec----cc
Confidence 5688999999999999987 47788889999999 9999999999988874 45532 11 111 111 22
Q ss_pred hcCCCccEEE-----ecCCc---HHHHHHHHHHhccCCceEEEEcc
Q 025264 136 LTDGGVDYSF-----ECIGN---VSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 136 ~~~~~~d~v~-----d~~g~---~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
... .||.|+ +.+|. +.-++.+.+.|+|+ |++++-..
T Consensus 124 ~~~-~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 124 LPG-KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred cCC-CCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 222 688885 34543 23378888899997 98875433
No 168
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.56 E-value=0.00032 Score=56.17 Aligned_cols=105 Identities=17% Similarity=0.331 Sum_probs=75.6
Q ss_pred hhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc-E--E--eCCCCCCc
Q 025264 57 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-E--F--VNPKDHDK 127 (255)
Q Consensus 57 ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~-~--v--i~~~~~~~ 127 (255)
.++..+.++.+++||++||-+|+|- |.+++..|+..|+ +|++++-|++..+.+++ .|.. . + -|+++
T Consensus 59 ~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd--- 133 (283)
T COG2230 59 AKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD--- 133 (283)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc---
Confidence 3444567899999999999999985 8889999999999 99999999998888744 5543 1 1 12221
Q ss_pred hHHHHHHhhcCCCccEEE-----ecCCc---HHHHHHHHHHhccCCceEEEEccCCC
Q 025264 128 PIQQVLVDLTDGGVDYSF-----ECIGN---VSVMRAALECCHKGWGTSVIVGVAAS 176 (255)
Q Consensus 128 ~~~~~i~~~~~~~~d~v~-----d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~ 176 (255)
+.+ .||-|+ +.+|. +.-+..+-++|+++ |++.+-.....
T Consensus 134 --------~~e-~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~ 180 (283)
T COG2230 134 --------FEE-PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGP 180 (283)
T ss_pred --------ccc-ccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCC
Confidence 211 477764 45554 23377888899997 99887766543
No 169
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.55 E-value=0.00068 Score=51.19 Aligned_cols=90 Identities=31% Similarity=0.375 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecC
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 148 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 148 (255)
-.|.+|.|+|.|.+|...++.++..|. +|++.+++........+.+... .++.+.+. ..|+|+.+.
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~ell~-----~aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDELLA-----QADIVSLHL 99 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHHHHH-----H-SEEEE-S
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhhhcc-----hhhhhhhhh
Confidence 468999999999999999999999999 9999999887766455555421 33444444 378888665
Q ss_pred Cc-HH----HHHHHHHHhccCCceEEEEcc
Q 025264 149 GN-VS----VMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 149 g~-~~----~~~~~~~~l~~~~G~~v~~g~ 173 (255)
.. +. .-...+..++++ ..+|.++-
T Consensus 100 plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred ccccccceeeeeeeeeccccc-eEEEeccc
Confidence 52 21 125667888885 77776643
No 170
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.0019 Score=50.91 Aligned_cols=79 Identities=24% Similarity=0.396 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC----CcEE-eCCCCCCchHHHHHHhhcC--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG----VTEF-VNPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g----~~~v-i~~~~~~~~~~~~i~~~~~--~~ 140 (255)
++.+++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++. ...+ .|..+ ...+.+.+.+... ++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD-EADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 4678999997 9999999988888899 999999988766554 3332 2211 23222 1233333333321 26
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|.++++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998764
No 171
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.51 E-value=0.00045 Score=47.66 Aligned_cols=92 Identities=27% Similarity=0.314 Sum_probs=61.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCCcchHHHHHhc----CC-cEE-eCCCCCCchHHHHHHhhcCCCcc
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAK-AAGASRVIGIDIDPKKFDRAKNF----GV-TEF-VNPKDHDKPIQQVLVDLTDGGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~-~~g~~~v~~~~~~~~~~~~~~~~----g~-~~v-i~~~~~~~~~~~~i~~~~~~~~d 142 (255)
|+.+||-.|+|. |..+..+++ ..++ +|++++.+++-.+.+++. +. +.+ +-. .++ ..... ..+.||
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~----~d~-~~~~~-~~~~~D 72 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ----GDA-EFDPD-FLEPFD 72 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE----SCC-HGGTT-TSSCEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE----Ccc-ccCcc-cCCCCC
Confidence 688999999875 888888888 4677 999999999888887542 22 222 111 222 11111 112799
Q ss_pred EEEecC-Cc---------HHHHHHHHHHhccCCceEEE
Q 025264 143 YSFECI-GN---------VSVMRAALECCHKGWGTSVI 170 (255)
Q Consensus 143 ~v~d~~-g~---------~~~~~~~~~~l~~~~G~~v~ 170 (255)
+|+... .. ...++.+.+.|+++ |+++.
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred EEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 999765 21 12378888999997 98875
No 172
>PRK08017 oxidoreductase; Provisional
Probab=97.49 E-value=0.00092 Score=53.34 Aligned_cols=77 Identities=25% Similarity=0.353 Sum_probs=54.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEE-eCCCCCCchH---HHHHHhhcCCCccEEEe
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPI---QQVLVDLTDGGVDYSFE 146 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~---~~~i~~~~~~~~d~v~d 146 (255)
++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+++.+++.+ .|..+ ...+ .+.+....++.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence 47999998 9999999999999999 99999999888888777776543 34332 1222 22333323346888888
Q ss_pred cCCc
Q 025264 147 CIGN 150 (255)
Q Consensus 147 ~~g~ 150 (255)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 7763
No 173
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.00053 Score=57.13 Aligned_cols=78 Identities=21% Similarity=0.342 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE---EeCCCCCCchHH---HHHHhhcC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQ---QVLVDLTD 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~---~~i~~~~~ 138 (255)
+++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.+. ..|-.+ ++... +.+.+..
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~- 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFG- 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhc-
Confidence 4689999998 8999999999999999 999999988876544 3445432 124333 12222 2222222
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 379999999883
No 174
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.48 E-value=0.0026 Score=51.89 Aligned_cols=98 Identities=18% Similarity=0.219 Sum_probs=71.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHH-HcCCCeEEEEcCCcchHHHHHhcCC-cEEeCCCCCCchHHHHHHhhcCCCccEEEe
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAK-AAGASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 146 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~-~~g~~~v~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d 146 (255)
..+.|+|.+| +.+++.++..++ ..+..++|+++ |+.+..+.+.+|+ +.++.|.+ +.++....--+++|
T Consensus 135 ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VD 205 (314)
T PF11017_consen 135 GAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVD 205 (314)
T ss_pred CccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEE
Confidence 4467888877 888888888888 55544899888 6777789999995 77887754 44443335667889
Q ss_pred cCCcHHHHHHHHHHhccCCceEEEEccCCC
Q 025264 147 CIGNVSVMRAALECCHKGWGTSVIVGVAAS 176 (255)
Q Consensus 147 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 176 (255)
..|.......+-..++..--..+.+|....
T Consensus 206 faG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 206 FAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred CCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 999999777777788764245677777543
No 175
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.47 E-value=0.00073 Score=59.38 Aligned_cols=75 Identities=25% Similarity=0.265 Sum_probs=56.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEe
Q 025264 67 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 146 (255)
Q Consensus 67 ~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d 146 (255)
.+.++++|+|+|.|..|++++++++..|+ +|++.+..+++.+.+++.|+..+ ... ...+.+. .+|+|+.
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~----~~~~~l~-----~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STS----DAVQQIA-----DYALVVT 76 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCc----chHhHhh-----cCCEEEE
Confidence 35678999999999999999999999999 99999977666666777787433 211 1112222 4799999
Q ss_pred cCCcHH
Q 025264 147 CIGNVS 152 (255)
Q Consensus 147 ~~g~~~ 152 (255)
+.|.+.
T Consensus 77 SpGi~~ 82 (488)
T PRK03369 77 SPGFRP 82 (488)
T ss_pred CCCCCC
Confidence 988654
No 176
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.00093 Score=53.39 Aligned_cols=79 Identities=28% Similarity=0.411 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCcEE-eCCCCCCchHHHHHHhhcC--CCccEE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYS 144 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~i~~~~~--~~~d~v 144 (255)
++++|+|+|+ |++|...++.+...|+ +|+++++++.+.+.. .+++...+ .|..+ +..+.+.+.+... +.+|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 9999999999999999 999999887766554 34443322 24333 1223223333221 268999
Q ss_pred EecCCc
Q 025264 145 FECIGN 150 (255)
Q Consensus 145 ~d~~g~ 150 (255)
+.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 177
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.46 E-value=0.00059 Score=53.08 Aligned_cols=101 Identities=20% Similarity=0.278 Sum_probs=67.5
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHh----cCCcE--EeCCCCCCchHHHHHH
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLV 134 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~i~ 134 (255)
+.....++++++||-.|+|. |..+..+++..+. .+|++++.+++-.+.+++ .|... ++..+. ...+
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~-~~~~----- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG-TLGY----- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc-ccCC-----
Confidence 45677899999999999874 7777788877653 299999999887776643 44322 221110 0101
Q ss_pred hhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEE
Q 025264 135 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 135 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
...+.||.|+-....+...+..++.|+++ |+++..
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 01137999985554455467888899997 998765
No 178
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0025 Score=51.18 Aligned_cols=79 Identities=29% Similarity=0.349 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCc--E-EeCCCCCCchHHHHHHhhcC--CCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT--E-FVNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~--~-vi~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
++++++|+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++.. . ..|..+ ++.+.+.+.+... +.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4679999997 9999999999999999 999999988765554 444422 1 123333 1333333333221 3689
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
+++++.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998874
No 179
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.45 E-value=0.0029 Score=55.05 Aligned_cols=78 Identities=24% Similarity=0.371 Sum_probs=51.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcc--hHHH-HHhcCCcEE-eCCCCCCchHHHHH-Hhhc--CCC
Q 025264 69 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDR-AKNFGVTEF-VNPKDHDKPIQQVL-VDLT--DGG 140 (255)
Q Consensus 69 ~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~--~~~~-~~~~g~~~v-i~~~~~~~~~~~~i-~~~~--~~~ 140 (255)
.+++++||+|+ |++|...++.+...|+ +|+++++++. +.+. .++++...+ .|..+ .+-.+.+ .... .++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCC
Confidence 35789999998 9999999999999999 9999887432 2222 244554322 34443 3322222 2221 126
Q ss_pred ccEEEecCC
Q 025264 141 VDYSFECIG 149 (255)
Q Consensus 141 ~d~v~d~~g 149 (255)
+|+++++.|
T Consensus 285 id~vi~~AG 293 (450)
T PRK08261 285 LDIVVHNAG 293 (450)
T ss_pred CCEEEECCC
Confidence 999999988
No 180
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.45 E-value=0.0022 Score=53.98 Aligned_cols=94 Identities=21% Similarity=0.228 Sum_probs=65.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC---Cc-EEeCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 72 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---VT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 72 ~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g---~~-~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
.+|||+|+|.+|+.+++.+.+.|-.+|++.+++.++.+.+.+.. .. ..+|-.+ .+.+.+.++ ++|+|++|
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-~~al~~li~-----~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-VDALVALIK-----DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-hHHHHHHHh-----cCCEEEEe
Confidence 57999999999999999999888449999999999998886653 22 3445443 123333343 46999999
Q ss_pred CCcHHHHHHHH-HHhccCCceEEEEcc
Q 025264 148 IGNVSVMRAAL-ECCHKGWGTSVIVGV 173 (255)
Q Consensus 148 ~g~~~~~~~~~-~~l~~~~G~~v~~g~ 173 (255)
......+ .++ .+++.+ =.++....
T Consensus 76 ~p~~~~~-~i~ka~i~~g-v~yvDts~ 100 (389)
T COG1748 76 APPFVDL-TILKACIKTG-VDYVDTSY 100 (389)
T ss_pred CCchhhH-HHHHHHHHhC-CCEEEccc
Confidence 9987744 444 455553 45555544
No 181
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.43 E-value=0.0023 Score=56.53 Aligned_cols=105 Identities=13% Similarity=0.152 Sum_probs=67.2
Q ss_pred hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh---------cC------CcEE-eCCCCCC
Q 025264 64 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---------FG------VTEF-VNPKDHD 126 (255)
Q Consensus 64 ~~~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~---------~g------~~~v-i~~~~~~ 126 (255)
...+.+.+++|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ .| +..+ .|-.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-- 149 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-- 149 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--
Confidence 4456678899999998 9999999999988999 99999998887655421 12 1111 23322
Q ss_pred chHHHHHHhhcCCCccEEEecCCcHH---------------HHHHHHHHhcc-CCceEEEEccCC
Q 025264 127 KPIQQVLVDLTDGGVDYSFECIGNVS---------------VMRAALECCHK-GWGTSVIVGVAA 175 (255)
Q Consensus 127 ~~~~~~i~~~~~~~~d~v~d~~g~~~---------------~~~~~~~~l~~-~~G~~v~~g~~~ 175 (255)
. +.+.+.. +++|+||++.|... ....+++.+.. +.++||.++...
T Consensus 150 ~---esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 150 P---DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred H---HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 2 2233332 26999999987531 12233444333 226899887754
No 182
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.42 E-value=0.0014 Score=50.64 Aligned_cols=100 Identities=20% Similarity=0.196 Sum_probs=66.7
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC--CCeEEEEcCCcchHHHHH----hcCCc---EEeCCCCCCchHHHH
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG--ASRVIGIDIDPKKFDRAK----NFGVT---EFVNPKDHDKPIQQV 132 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g--~~~v~~~~~~~~~~~~~~----~~g~~---~vi~~~~~~~~~~~~ 132 (255)
+.+...++++++||-.|+|. |..+..+++..+ . +|++++.+++-.+.++ ..+.. .++..+ ..+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g-~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d-----~~~~ 136 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRG-KVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD-----GKRG 136 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC-----cccC
Confidence 44667788999999999875 777777787764 4 8999999988766654 34432 122211 1111
Q ss_pred HHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEE
Q 025264 133 LVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 133 i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
+.. .+.||.|+-+.......+...+.|+++ |+++..
T Consensus 137 ~~~--~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 137 LEK--HAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred Ccc--CCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 111 137999986655555457888999997 988764
No 183
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.39 E-value=0.00042 Score=53.59 Aligned_cols=101 Identities=25% Similarity=0.328 Sum_probs=66.1
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCCcchHHHH----HhcCCcEE-eCCCCCCchHHHHHHh
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRA----KNFGVTEF-VNPKDHDKPIQQVLVD 135 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~-~v~~~~~~~~~~~~~----~~~g~~~v-i~~~~~~~~~~~~i~~ 135 (255)
+.+...++||++||-.|+|. |..++-+++..|.. +|+.+++.++-.+.+ +++|.+.+ +...+ . ..-
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd--g-----~~g 135 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD--G-----SEG 135 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES---G-----GGT
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc--h-----hhc
Confidence 45778899999999999874 78888888887743 689999887655544 44565432 11111 1 111
Q ss_pred hcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEEE
Q 025264 136 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 136 ~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
+... +||.|+-+.+.+..-...++.|+++ |+++..
T Consensus 136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 1122 7999998877776457888999997 988874
No 184
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0038 Score=52.14 Aligned_cols=79 Identities=18% Similarity=0.206 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE---EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
++++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++.|... ..|..+ ++.+.+.+..... +
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 4678999998 9999999999999999 999999988766544 2345432 134333 1223222222211 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|+++++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999998884
No 185
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0033 Score=49.87 Aligned_cols=101 Identities=22% Similarity=0.254 Sum_probs=61.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcc-hHHHH----HhcCCc--E-EeCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRA----KNFGVT--E-FVNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~-~~~~~----~~~g~~--~-vi~~~~~~~~~~~~i~~~~~-- 138 (255)
+++++||+|+ |.+|...++.+...|. +|+++.++.+ +.+.+ +..+.. . ..|..+ ++++.+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 4578999997 9999999998888999 9999887653 22222 222322 1 124333 1223333332221
Q ss_pred CCccEEEecCCcH-------------------HHHHHHHHHhccCCceEEEEcc
Q 025264 139 GGVDYSFECIGNV-------------------SVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 139 ~~~d~v~d~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
+++|+++.+.+.. ..++.+.+.+..+ |+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 2689998877642 1244555555565 78888865
No 186
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.37 E-value=0.0028 Score=44.40 Aligned_cols=101 Identities=23% Similarity=0.332 Sum_probs=66.4
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCcE--EeCCCCCCchHHHHHHhh
Q 025264 63 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDL 136 (255)
Q Consensus 63 ~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~i~~~ 136 (255)
.....+.++++|+-.|+|. |..+..+++..+..+|++++.++...+.+++ .+... ++.... ... ....
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~--~~~---~~~~ 85 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA--PEA---LEDS 85 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc--ccc---Chhh
Confidence 3555677888999999976 8888899988753499999999887777643 34322 221111 110 1111
Q ss_pred cCCCccEEEecCCc---HHHHHHHHHHhccCCceEEEE
Q 025264 137 TDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 137 ~~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 171 (255)
.+.+|.|+-.... ...++.+.+.|+++ |+++.-
T Consensus 86 -~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 86 -LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred -cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 1279999865432 23478889999997 998764
No 187
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0017 Score=50.78 Aligned_cols=77 Identities=17% Similarity=0.208 Sum_probs=52.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcE--EeCCCCCCchHHHHHHhhcCCCccEEEecC
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFECI 148 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 148 (255)
++++|+|+ |++|...++.+...|+ +|+++++++++.+.+++.+... ..|-.+ .+.+.+.+.....+++|+++.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 47899997 9999999988888999 9999999888776665543221 233333 12333333333333799999887
Q ss_pred Cc
Q 025264 149 GN 150 (255)
Q Consensus 149 g~ 150 (255)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 64
No 188
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0014 Score=51.58 Aligned_cols=79 Identities=23% Similarity=0.269 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH----HHhcCCcEE-eCCCCCCchHHHHHHhhcC--CCc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGV 141 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~----~~~~g~~~v-i~~~~~~~~~~~~i~~~~~--~~~ 141 (255)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++.+. ++..+...+ .|..+ .+++.+.+.+... +++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 3689999998 9999999998888899 99999987765332 222333322 23222 1233332332221 279
Q ss_pred cEEEecCCc
Q 025264 142 DYSFECIGN 150 (255)
Q Consensus 142 d~v~d~~g~ 150 (255)
|+++++.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998773
No 189
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0016 Score=52.67 Aligned_cols=78 Identities=28% Similarity=0.341 Sum_probs=52.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC-CcEE-eCCCCCCchHHHHHHhhcC--CCccEE
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG-VTEF-VNPKDHDKPIQQVLVDLTD--GGVDYS 144 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g-~~~v-i~~~~~~~~~~~~i~~~~~--~~~d~v 144 (255)
+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++ ...+ .|..+ ++.+.+.+.+... +++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 578999998 9999999998888999 999999988776655 3444 3222 34333 1233333333221 379999
Q ss_pred EecCCc
Q 025264 145 FECIGN 150 (255)
Q Consensus 145 ~d~~g~ 150 (255)
+++.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 998874
No 190
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0016 Score=53.37 Aligned_cols=79 Identities=22% Similarity=0.366 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCC--cEE---eCCCCCCchHHHHHHhhcC--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--TEF---VNPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~--~~v---i~~~~~~~~~~~~i~~~~~--~~ 140 (255)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++. ... .|-.+ .....+.+.+... ++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 5689999997 9999999999999999 999999988876655 44442 211 34333 1223333333221 37
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 191
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=97.30 E-value=0.0026 Score=49.85 Aligned_cols=105 Identities=25% Similarity=0.293 Sum_probs=75.6
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHH----hcCCcEEeCCCCCCchHHHHHHhh
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL 136 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~i~~~ 136 (255)
+....++.||++|+--|.|+ |-+++-||+..|. .+|+..+..++..+.++ ++|....+.... . .+.+.
T Consensus 86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~--~----Dv~~~ 158 (256)
T COG2519 86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL--G----DVREG 158 (256)
T ss_pred HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe--c----ccccc
Confidence 45778999999999888765 8888999988875 49999999988877774 345332121111 1 22222
Q ss_pred cCC-CccEEE-ecCCcHHHHHHHHHHhccCCceEEEEccC
Q 025264 137 TDG-GVDYSF-ECIGNVSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 137 ~~~-~~d~v~-d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
..+ .||.+| |-...-..++.+.+.|+++ |.++.+..+
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~ 197 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPT 197 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCC
Confidence 223 799887 7777777789999999997 999988553
No 192
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0013 Score=52.63 Aligned_cols=83 Identities=27% Similarity=0.295 Sum_probs=54.6
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc-C-C--c-EEeCCCCCCchHHHHHHhhcC--
Q 025264 67 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-G-V--T-EFVNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 67 ~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~-g-~--~-~vi~~~~~~~~~~~~i~~~~~-- 138 (255)
...++.++||+|+ |.+|..+++.+...|+ +|++++++++..+.+.+. . . . ...|..+ +..+.+.+.+...
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERF 84 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 3457789999998 9999999999999999 999999987766655332 2 1 1 1234333 1222222222211
Q ss_pred CCccEEEecCCcH
Q 025264 139 GGVDYSFECIGNV 151 (255)
Q Consensus 139 ~~~d~v~d~~g~~ 151 (255)
+++|.|+.+.|..
T Consensus 85 ~~~d~vi~~ag~~ 97 (264)
T PRK12829 85 GGLDVLVNNAGIA 97 (264)
T ss_pred CCCCEEEECCCCC
Confidence 2799999988753
No 193
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0023 Score=49.98 Aligned_cols=77 Identities=18% Similarity=0.254 Sum_probs=53.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcE-EeCCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
++++|+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+... ..|-.+ ...+.+.+.+..++++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 46899997 9999999988888899 9999999888777776665432 234333 122333222333237999998877
Q ss_pred c
Q 025264 150 N 150 (255)
Q Consensus 150 ~ 150 (255)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
No 194
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.29 E-value=0.0018 Score=53.70 Aligned_cols=80 Identities=16% Similarity=0.188 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hc----C-Cc---EEeCCCCCCchHHHHHHhhcCC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----G-VT---EFVNPKDHDKPIQQVLVDLTDG 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~----g-~~---~vi~~~~~~~~~~~~i~~~~~~ 139 (255)
.|++++|+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++ + .. ...|-.+...+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 5789999998 8999999988888999 9999999988776552 21 1 11 1233332112334445554455
Q ss_pred -CccEEEecCCc
Q 025264 140 -GVDYSFECIGN 150 (255)
Q Consensus 140 -~~d~v~d~~g~ 150 (255)
++|++++++|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 67799988763
No 195
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0016 Score=52.38 Aligned_cols=79 Identities=18% Similarity=0.236 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-EE--eCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EF--VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~v--i~~~~~~~~~~~~i~~~~~--~ 139 (255)
++.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +.+.. .+ .|..+ +..+.+.+.+... +
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999997 8999999999999999 9999999887655442 22322 11 34333 1223222232211 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|+++++.|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 196
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.28 E-value=0.00088 Score=50.07 Aligned_cols=100 Identities=23% Similarity=0.281 Sum_probs=64.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEE-eCCCCC--------------CchHHHHHHhh
Q 025264 72 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH--------------DKPIQQVLVDL 136 (255)
Q Consensus 72 ~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~--------------~~~~~~~i~~~ 136 (255)
.+|+|+|+|.+|+.|+++++.+|+ +|+..+..+++.+..+..+...+ +.+.+. +......+.+.
T Consensus 21 ~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 99 (168)
T PF01262_consen 21 AKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAEF 99 (168)
T ss_dssp -EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHHH
Confidence 789999999999999999999999 99999999888888888776543 221110 12222223222
Q ss_pred cCCCccEEEecCC-----cHH-HHHHHHHHhccCCceEEEEccC
Q 025264 137 TDGGVDYSFECIG-----NVS-VMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 137 ~~~~~d~v~d~~g-----~~~-~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
.. .+|+++.+.- .|. ..+..++.++++ ..++.+..-
T Consensus 100 i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D 141 (168)
T PF01262_consen 100 IA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD 141 (168)
T ss_dssp HH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred Hh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence 11 4788885322 122 136777888885 788888553
No 197
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.27 E-value=0.0031 Score=47.98 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=62.9
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHH----hcCCcEEeCCCCCCchHHHHHHhhcCCC
Q 025264 66 AKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDGG 140 (255)
Q Consensus 66 ~~~~~~~~vlI~G~g~vG~~a~~l~~~~-g~~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~i~~~~~~~ 140 (255)
..++++.+||-.|+|+ |..+..+++.. +. +|++++.+++..+.++ +.+.+.+ .... .+..+ +.. .+.
T Consensus 41 ~~l~~g~~VLDiGcGt-G~~al~la~~~~~~-~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~--~d~~~-~~~--~~~ 112 (187)
T PRK00107 41 PYLPGGERVLDVGSGA-GFPGIPLAIARPEL-KVTLVDSLGKKIAFLREVAAELGLKNV-TVVH--GRAEE-FGQ--EEK 112 (187)
T ss_pred hhcCCCCeEEEEcCCC-CHHHHHHHHHCCCC-eEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe--ccHhh-CCC--CCC
Confidence 3455689999999864 66666666655 45 9999999988776664 3454322 1111 22222 211 237
Q ss_pred ccEEEec-CCc-HHHHHHHHHHhccCCceEEEEc
Q 025264 141 VDYSFEC-IGN-VSVMRAALECCHKGWGTSVIVG 172 (255)
Q Consensus 141 ~d~v~d~-~g~-~~~~~~~~~~l~~~~G~~v~~g 172 (255)
||+|+-. .+. +..++.+.+.++++ |+++.+-
T Consensus 113 fDlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 113 FDVVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred ccEEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 9999953 222 34477889999997 9988773
No 198
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.27 E-value=0.0017 Score=52.11 Aligned_cols=78 Identities=21% Similarity=0.259 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc-CCc--EE-eCCCCCCchHHHHHHhhcC--CCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVT--EF-VNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~-g~~--~v-i~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
++++++|+|+ |++|...++.+...|+ +|++++++.++.+.+++. +.. .+ .|..+ +....+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999997 8999999999999999 999999988777666543 321 11 23332 1223333333222 3689
Q ss_pred EEEecCC
Q 025264 143 YSFECIG 149 (255)
Q Consensus 143 ~v~d~~g 149 (255)
+++++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999886
No 199
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0022 Score=50.74 Aligned_cols=77 Identities=25% Similarity=0.360 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcCCcEE-eCCCCCCchHHHHHHhhcCCCccEEEe
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE 146 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~v~d 146 (255)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+...+ .|..+ ..-.+...+. .+++|++++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~-~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD--DAAIRAALAA-AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC--HHHHHHHHHH-hCCCCEEEE
Confidence 5679999998 8999999999999999 9999999887766553 3454332 34443 3322222221 136999999
Q ss_pred cCCc
Q 025264 147 CIGN 150 (255)
Q Consensus 147 ~~g~ 150 (255)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 8874
No 200
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.26 E-value=0.0048 Score=47.81 Aligned_cols=109 Identities=22% Similarity=0.220 Sum_probs=72.3
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHH----hcCCcEEeCCCCCCchHHHHHHhh
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL 136 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~i~~~ 136 (255)
|....+.++.++||-+|.+ .|..++++|..+. -.+++.++.++++.+.++ +.|.+..+.-... .+..+.+.+.
T Consensus 51 L~~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~~ 128 (219)
T COG4122 51 LRLLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSRL 128 (219)
T ss_pred HHHHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHhc
Confidence 3455666788999999864 3777888888775 338999999999888875 4565432211110 1444555543
Q ss_pred cCCCccEEE-ecCCc--HHHHHHHHHHhccCCceEEEEcc
Q 025264 137 TDGGVDYSF-ECIGN--VSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 137 ~~~~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
..+.||+|| |+--. +..++.+++.+++| |.++.=..
T Consensus 129 ~~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNv 167 (219)
T COG4122 129 LDGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNV 167 (219)
T ss_pred cCCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeec
Confidence 334899998 54432 44589999999996 77765443
No 201
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.26 E-value=0.00063 Score=46.41 Aligned_cols=88 Identities=25% Similarity=0.283 Sum_probs=59.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
++.+|||.|+|.+|..-++.+...|+ +|++++... +..+ +--... . ..+. ..+ .++++|+-+++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~----~~~~---~~l--~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R----REFE---EDL--DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E----SS-G---GGC--TTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h----hhHH---HHH--hhheEEEecCC
Confidence 46899999999999999999999999 999999765 2222 211121 1 2231 111 26999999999
Q ss_pred cHHHHHHHHHHhccCCceEEEEccC
Q 025264 150 NVSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 150 ~~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
.+..-+.+....+.. |.++.+...
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~ 93 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDD 93 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCC
Confidence 988566777777775 888887653
No 202
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0017 Score=51.79 Aligned_cols=80 Identities=19% Similarity=0.258 Sum_probs=53.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCC-cEE--eCCCCCCchHHHHHHhhc--C
Q 025264 69 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGV-TEF--VNPKDHDKPIQQVLVDLT--D 138 (255)
Q Consensus 69 ~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~-~~v--i~~~~~~~~~~~~i~~~~--~ 138 (255)
..+++++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+ .+. ..+ .|..+ ++++.+.+.+.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 35689999997 9999999999999999 99999998877655422 121 112 23322 123333333221 1
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+.+|+++++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 368999998883
No 203
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.26 E-value=0.0013 Score=53.01 Aligned_cols=94 Identities=20% Similarity=0.214 Sum_probs=70.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcE--EeCCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 72 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 72 ~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
.+|.|+|+|.+|.-++..|..+|+ +|.+.+.+.+|.+.+..+-..+ +.-... .++.+.+. ..|+++.++-
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~--~~iee~v~-----~aDlvIgaVL 240 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTP--SNIEEAVK-----KADLVIGAVL 240 (371)
T ss_pred ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCH--HHHHHHhh-----hccEEEEEEE
Confidence 468888999999999999999999 9999999999998887644332 222222 56666555 4788887553
Q ss_pred c------HHHHHHHHHHhccCCceEEEEccC
Q 025264 150 N------VSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 150 ~------~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
- ....++.++.|+++ +.++.+..-
T Consensus 241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiD 270 (371)
T COG0686 241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAID 270 (371)
T ss_pred ecCCCCceehhHHHHHhcCCC-cEEEEEEEc
Confidence 2 22468889999997 999888653
No 204
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0019 Score=51.55 Aligned_cols=79 Identities=23% Similarity=0.278 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc----EEeCCCCCCchHHHHHHhhcC--CCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT----EFVNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
+++++||+|+ |++|...++.+...|+ +|+.++++++..+...+.... ...|..+ +..+.+.+.+... +++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4679999998 9999999999989999 999999887655544443211 1133332 1223322322211 2689
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
+++.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
No 205
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.25 E-value=0.002 Score=51.77 Aligned_cols=79 Identities=23% Similarity=0.250 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCC--cE-EeCCCCCCchHHHHHHhhcC--CCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV--TE-FVNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~--~~-vi~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
+++++||+|+ +++|...++.+...|+ +|+++++++++.+.+.+ ++. .. ..|-.+ +....+.+.+... +.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 4679999997 8999999999999999 99999998877766643 332 11 123332 1223333333221 3699
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
+++++.|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99998873
No 206
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=97.24 E-value=0.005 Score=48.44 Aligned_cols=114 Identities=20% Similarity=0.256 Sum_probs=76.9
Q ss_pred hhhhhhH-HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCcEEeCCCCCCchH
Q 025264 55 VPTGLGA-VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPI 129 (255)
Q Consensus 55 ~~ta~~~-l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~ 129 (255)
.-..|.- +.....+.||++||=.|+|. |-.+..+++..|..+|++++.|+.-++.+++ .|... +..-. .+
T Consensus 35 ~~~~Wr~~~i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~--~d- 109 (238)
T COG2226 35 LHRLWRRALISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV--GD- 109 (238)
T ss_pred chHHHHHHHHHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE--ec-
Confidence 3344443 44556677999999998874 9999999999986699999999987777744 33221 11110 11
Q ss_pred HHHHHhhcCCCccEEEecCC------cHHHHHHHHHHhccCCceEEEEccCC
Q 025264 130 QQVLVDLTDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 130 ~~~i~~~~~~~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
.+.+. +.+..||+|.-+.| -+.++.+..|.++|+ |+++.+....
T Consensus 110 Ae~LP-f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~ 159 (238)
T COG2226 110 AENLP-FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSK 159 (238)
T ss_pred hhhCC-CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCC
Confidence 11221 22237899876555 244689999999997 9998887653
No 207
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.23 E-value=0.005 Score=45.88 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=63.1
Q ss_pred ccccccchhhhhhHHHhhcCCCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCC
Q 025264 48 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 126 (255)
Q Consensus 48 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~-vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 126 (255)
....|+....+...+.+...--.+.+|+|.|+|. +|..++..++..|+ +|+++.++.
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~--------------------- 78 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT--------------------- 78 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------
Confidence 3445543333333332333335789999999986 59989999999999 888887642
Q ss_pred chHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccC
Q 025264 127 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 127 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
+++.+.+. .+|+||.+++.+..+.. ..++++ -.++.++..
T Consensus 79 ~~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~p 118 (168)
T cd01080 79 KNLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGIN 118 (168)
T ss_pred hhHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCC
Confidence 22333333 48999999998773322 356775 677777664
No 208
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0022 Score=51.98 Aligned_cols=79 Identities=23% Similarity=0.262 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc---E-EeCCCCCCchHHHHHHhhcC--CCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT---E-FVNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~---~-vi~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.... . ..|..+ ++.+.+.+.+... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 3568999998 9999999999988999 999999988877666543211 1 123333 1223333333221 2689
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
+++++.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999885
No 209
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.21 E-value=0.0029 Score=54.20 Aligned_cols=75 Identities=12% Similarity=0.141 Sum_probs=54.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
-++.+|+|.|+|.+|.+++..+...|+.+++++.|+.++.+.+ .+++...++.. .++.+.+. .+|+||.|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~----~~l~~~l~-----~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL----SELPQLIK-----KADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH----HHHHHHhc-----cCCEEEEC
Confidence 4578999999999999999999999986899999998876666 44542222222 12222222 59999999
Q ss_pred CCcHH
Q 025264 148 IGNVS 152 (255)
Q Consensus 148 ~g~~~ 152 (255)
++.+.
T Consensus 250 T~a~~ 254 (414)
T PRK13940 250 VNVLE 254 (414)
T ss_pred cCCCC
Confidence 99877
No 210
>PRK00536 speE spermidine synthase; Provisional
Probab=97.21 E-value=0.0014 Score=52.37 Aligned_cols=96 Identities=17% Similarity=0.013 Sum_probs=64.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCC-cEEeCCCCCCchHHHHHHhhcCCCccEEE-e
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV-TEFVNPKDHDKPIQQVLVDLTDGGVDYSF-E 146 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~-~~vi~~~~~~~~~~~~i~~~~~~~~d~v~-d 146 (255)
.-++|||.|+|- |.++-+++|+- . +|+.++.+++-.+.+++ +.. ...++... -++...+.+...+.||+|+ |
T Consensus 72 ~pk~VLIiGGGD-Gg~~REvLkh~-~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR--v~l~~~~~~~~~~~fDVIIvD 146 (262)
T PRK00536 72 ELKEVLIVDGFD-LELAHQLFKYD-T-HVDFVQADEKILDSFISFFPHFHEVKNNKN--FTHAKQLLDLDIKKYDLIICL 146 (262)
T ss_pred CCCeEEEEcCCc-hHHHHHHHCcC-C-eeEEEECCHHHHHHHHHHCHHHHHhhcCCC--EEEeehhhhccCCcCCEEEEc
Confidence 348999998865 66778888886 3 99999999988888887 321 11222221 2222233333334799998 7
Q ss_pred cCCcHHHHHHHHHHhccCCceEEEE
Q 025264 147 CIGNVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 147 ~~g~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
+.-.+.-++.+.++|+++ |.++.=
T Consensus 147 s~~~~~fy~~~~~~L~~~-Gi~v~Q 170 (262)
T PRK00536 147 QEPDIHKIDGLKRMLKED-GVFISV 170 (262)
T ss_pred CCCChHHHHHHHHhcCCC-cEEEEC
Confidence 565666478899999997 887754
No 211
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0028 Score=50.79 Aligned_cols=81 Identities=22% Similarity=0.355 Sum_probs=53.0
Q ss_pred CCCCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-----cCCcEE----eCCCCCCchHHHHHHhh
Q 025264 68 VEPGSIVAVFGL-G-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTEF----VNPKDHDKPIQQVLVDL 136 (255)
Q Consensus 68 ~~~~~~vlI~G~-g-~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-----~g~~~v----i~~~~~~~~~~~~i~~~ 136 (255)
+.++++++|+|+ | ++|.++++.+...|+ +|+++++++++.+...+ .+...+ .|..+ +..+.+.+.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence 445789999997 6 799999999999999 89999988766554422 343222 24333 12233323222
Q ss_pred c--CCCccEEEecCCc
Q 025264 137 T--DGGVDYSFECIGN 150 (255)
Q Consensus 137 ~--~~~~d~v~d~~g~ 150 (255)
. .+.+|+++++.|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 1 1378999999984
No 212
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.20 E-value=0.0021 Score=51.06 Aligned_cols=79 Identities=22% Similarity=0.289 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC--Cc--E-EeCCCCCCchHHHHHHhhc--CCC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG--VT--E-FVNPKDHDKPIQQVLVDLT--DGG 140 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g--~~--~-vi~~~~~~~~~~~~i~~~~--~~~ 140 (255)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ .++. .. . ..|..+ +..+...+.+.. .+.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4578999998 9999999998889999 899999998776554 2222 11 1 123332 123333333221 126
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 213
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.003 Score=50.77 Aligned_cols=79 Identities=20% Similarity=0.328 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hc----CCc--E-EeCCCCCCchHHHHHHhhcC-C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVT--E-FVNPKDHDKPIQQVLVDLTD-G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~----g~~--~-vi~~~~~~~~~~~~i~~~~~-~ 139 (255)
+++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. ++ +.. . ..|-.+ +....+.+.+... +
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 4688999997 8999999999999999 9999999877765542 21 321 1 223333 1233333333221 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|+++++.|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999998874
No 214
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.16 E-value=0.00079 Score=58.59 Aligned_cols=94 Identities=15% Similarity=0.118 Sum_probs=63.6
Q ss_pred hhcCCCCCCEEE----EEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc-EEeCCCCCCchHHHHHHhhc
Q 025264 64 NTAKVEPGSIVA----VFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLT 137 (255)
Q Consensus 64 ~~~~~~~~~~vl----I~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~i~~~~ 137 (255)
...++++++++| |+|+ |++|.+++|+++..|+ +|+++...+.+....+..+.+ .++|... ..+.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG--ITDPADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC--CCCHHHHHHHH
Confidence 456778888888 8875 9999999999999999 999988766644443444444 3555554 33444443221
Q ss_pred CCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCC
Q 025264 138 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 138 ~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
. .+...++.+.++ |+++.++...
T Consensus 104 -------------~-~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 104 -------------E-FFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred -------------H-HHHHHHHhccCC-CEEEEEcccc
Confidence 1 256667777886 8888887643
No 215
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0027 Score=50.39 Aligned_cols=79 Identities=25% Similarity=0.342 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCcE-E--eCCCCCCchHHHHHHhhcC--CCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++... . .|..+ ..+....+..... +++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4679999998 9999999999999999 999999887665554 4455432 1 23322 1222222222211 3699
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
+++++.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998874
No 216
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0025 Score=50.85 Aligned_cols=73 Identities=16% Similarity=0.115 Sum_probs=50.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc--E-EeCCCCCCchHHHHHHhhcCCCcc
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT--E-FVNPKDHDKPIQQVLVDLTDGGVD 142 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~--~-vi~~~~~~~~~~~~i~~~~~~~~d 142 (255)
+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+++ .+.. . ..|..+ . +.+.+...+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD--A---IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC--H---HHHHHHhcCCCC
Confidence 458999998 9999999999999999 99999988766555432 2322 1 123332 2 223333233799
Q ss_pred EEEecCC
Q 025264 143 YSFECIG 149 (255)
Q Consensus 143 ~v~d~~g 149 (255)
+++++.|
T Consensus 76 ~vi~~ag 82 (257)
T PRK09291 76 VLLNNAG 82 (257)
T ss_pred EEEECCC
Confidence 9999887
No 217
>PRK06484 short chain dehydrogenase; Validated
Probab=97.16 E-value=0.0058 Score=54.24 Aligned_cols=103 Identities=26% Similarity=0.361 Sum_probs=68.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCcE---EeCCCCCCchHHHHHHhhcC--CCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE---FVNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~---vi~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
.++++||+|+ +++|...++.+...|+ +|+++++++++.+.+.+ .+... ..|..+ ++.+.+.+.+... +.+|
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRLD 345 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5689999997 8999999999999999 99999998877776643 44321 234333 1233333333221 3699
Q ss_pred EEEecCCcHH--------------------------HHHHHHHHhccCCceEEEEccCC
Q 025264 143 YSFECIGNVS--------------------------VMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 143 ~v~d~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
+++++.|... ..+.++..++.+ |+++.++...
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~ 403 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIA 403 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchh
Confidence 9999887420 133444556665 8999887653
No 218
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0026 Score=50.75 Aligned_cols=79 Identities=20% Similarity=0.240 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc---EEeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT---EFVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~---~vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+.. ...|..+ +..+.+.+.+... +
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4689999998 8999999999999999 9999999887665542 22321 1233333 1233333333221 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|+++++.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 219
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0032 Score=49.99 Aligned_cols=79 Identities=25% Similarity=0.334 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCC--cE-EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--TE-FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~--~~-vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
.+.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+. .. ..|-.+ ...+.+.+.+... +
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4578999998 9999999998888999 9999998876554432 2222 11 233332 1222222222211 2
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999998884
No 220
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0037 Score=50.15 Aligned_cols=79 Identities=23% Similarity=0.307 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hc--C--CcEE-eCCCCCCchHHHHHHhhc-CCCc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--G--VTEF-VNPKDHDKPIQQVLVDLT-DGGV 141 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~--g--~~~v-i~~~~~~~~~~~~i~~~~-~~~~ 141 (255)
++.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++ + ...+ .|-.+ +..+.+.+.... .+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 4678999997 9999999998889999 9999999887765553 22 2 1111 23322 122222222211 2378
Q ss_pred cEEEecCCc
Q 025264 142 DYSFECIGN 150 (255)
Q Consensus 142 d~v~d~~g~ 150 (255)
|.++.+.|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999998874
No 221
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0035 Score=51.31 Aligned_cols=79 Identities=23% Similarity=0.314 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-EE--eCCCCCCchHHHHHHhhc--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EF--VNPKDHDKPIQQVLVDLT--DG 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~v--i~~~~~~~~~~~~i~~~~--~~ 139 (255)
.+.+++|+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +.+.. .. .|-.+ ++.+.+.+.... -+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 3578999997 9999999998888999 9999999887765542 22322 11 23332 122322233221 13
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|+++++.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 222
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.11 E-value=0.0046 Score=50.12 Aligned_cols=140 Identities=24% Similarity=0.333 Sum_probs=79.9
Q ss_pred ceeeEEEEcCCceEEcCCCCCcccccccccchhhhhhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 025264 24 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 103 (255)
Q Consensus 24 ~~ae~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~ 103 (255)
+|.+|..-....+.++.+++.+- ......|++..=.....++++.+||=.|+|+ |.+++-.++ +|+.+|++++.
T Consensus 120 sw~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~Di 193 (300)
T COG2264 120 SWREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALEKLLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDI 193 (300)
T ss_pred CCccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHHHhhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecC
Confidence 45544322234456666665442 2223344443211223466999999999864 666665554 78868999999
Q ss_pred CcchHHHHHh----cCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHH---HHHHHHHHhccCCceEEEEccCC
Q 025264 104 DPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS---VMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 104 ~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~---~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
++-..+.+++ .+.+..+.... .+..+ ...++.||+|+-+.=... ..+...+.++++ |++++-|...
T Consensus 194 Dp~AV~aa~eNa~~N~v~~~~~~~~--~~~~~---~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 194 DPQAVEAARENARLNGVELLVQAKG--FLLLE---VPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred CHHHHHHHHHHHHHcCCchhhhccc--ccchh---hcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 8876666543 33332110000 11111 111237999996554322 256778899997 9999998764
No 223
>PRK06196 oxidoreductase; Provisional
Probab=97.10 E-value=0.0039 Score=51.56 Aligned_cols=79 Identities=22% Similarity=0.249 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC-CcE-EeCCCCCCchHHHHHHhhcC--CCccE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG-VTE-FVNPKDHDKPIQQVLVDLTD--GGVDY 143 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g-~~~-vi~~~~~~~~~~~~i~~~~~--~~~d~ 143 (255)
.+.+++|+|+ |++|.++++.+...|+ +|+++++++++.+.+ .++. ... ..|-.+ ...+.+.+.+... +++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 4679999998 9999999998888999 999999988766554 2222 221 123333 1223333333222 37999
Q ss_pred EEecCCc
Q 025264 144 SFECIGN 150 (255)
Q Consensus 144 v~d~~g~ 150 (255)
++++.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9998873
No 224
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.09 E-value=0.0038 Score=51.72 Aligned_cols=95 Identities=16% Similarity=0.160 Sum_probs=62.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEe-CCCCCCchHHHHHHhhcCCCccEEEecCCc
Q 025264 73 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN 150 (255)
Q Consensus 73 ~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 150 (255)
+|+|+|+ |-+|..+++.+...|. +|++++|+.++...+...+++.+. |..+ +..+.+.++ ++|+|+++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d-~~~l~~al~-----g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL-PETLPPSFK-----GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC-HHHHHHHHC-----CCCEEEECCCC
Confidence 6999998 9999999999989999 999999987766655556665442 3222 122333332 58999998653
Q ss_pred HH------------HHHHHHHHhccCC-ceEEEEccC
Q 025264 151 VS------------VMRAALECCHKGW-GTSVIVGVA 174 (255)
Q Consensus 151 ~~------------~~~~~~~~l~~~~-G~~v~~g~~ 174 (255)
.. ....+++.++..+ .+++.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 11 1134455555431 378887764
No 225
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0051 Score=48.59 Aligned_cols=79 Identities=16% Similarity=0.183 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc--E-EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT--E-FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~--~-vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
..++++|+|+ |.+|..++..+...|. +|+++++++++.+.+. +.+.. . ..|-.+ .+.+...+.+... +
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4578999997 9999999999999999 9999999887655442 22221 1 123332 1333333333221 2
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|.++.+.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999998884
No 226
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0037 Score=49.95 Aligned_cols=79 Identities=18% Similarity=0.151 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh---cCCc--E-EeCCCCCCchHHHHHHhhcC--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVT--E-FVNPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~---~g~~--~-vi~~~~~~~~~~~~i~~~~~--~~ 140 (255)
++.++||+|+ |++|...++.+...|+ +|+++++++++.+..++ .+.. . ..|..+ ++.+...+.+... ++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence 4679999997 8999999988888999 99999988776544433 3422 1 123332 1223333333221 37
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999883
No 227
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0038 Score=49.78 Aligned_cols=79 Identities=20% Similarity=0.287 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCcE-E--eCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 139 (255)
++++++|+|+ |++|...++.+...|+ +|+.+++++++.+.+. +.+... . .|..+ +....+.+.+... +
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4678999997 8999999999999999 9999999887765542 233221 1 23332 1222222332221 2
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|+++++.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 69999998874
No 228
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.05 E-value=0.0052 Score=45.80 Aligned_cols=93 Identities=19% Similarity=0.293 Sum_probs=63.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC--cEEeCCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 73 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 73 ~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
+|.|+|+ |-+|...++=++.+|. .|++++|++.|....+..-+ ..+++. ..+.+.+. ++|+|+++.+
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~----~~~a~~l~-----g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDL----TSLASDLA-----GHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccCh----hhhHhhhc-----CCceEEEecc
Confidence 5788888 9999999999999999 99999999988766422211 113322 11222222 7999999988
Q ss_pred cHH---------HHHHHHHHhccC-CceEEEEccCC
Q 025264 150 NVS---------VMRAALECCHKG-WGTSVIVGVAA 175 (255)
Q Consensus 150 ~~~---------~~~~~~~~l~~~-~G~~v~~g~~~ 175 (255)
... ..+.++..++.. --|+..+|..+
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 641 244567777762 24888888764
No 229
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=97.05 E-value=0.0025 Score=49.00 Aligned_cols=101 Identities=19% Similarity=0.286 Sum_probs=62.7
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCcEEeCCCCCCchHHHHHHhhcC
Q 025264 63 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD 138 (255)
Q Consensus 63 ~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~i~~~~~ 138 (255)
.......++.+||-.|+|. |..+..+++. |. +|++++.+++-.+.+++ .+...+ .... .++.+ . .. .
T Consensus 23 ~~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~--~d~~~-~-~~-~ 93 (197)
T PRK11207 23 LEAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV--VDLNN-L-TF-D 93 (197)
T ss_pred HHhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe--cChhh-C-Cc-C
Confidence 3444566778999999875 7777788774 88 99999999887666643 232211 1110 11111 0 11 2
Q ss_pred CCccEEEecCC----c----HHHHHHHHHHhccCCceEEEEcc
Q 025264 139 GGVDYSFECIG----N----VSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 139 ~~~d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
+.||+|+.+.. . +..+..+.+.|+++ |.++.+..
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~~ 135 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVAA 135 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEEE
Confidence 36999986433 1 23467788889997 98655433
No 230
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.05 E-value=0.0052 Score=48.50 Aligned_cols=79 Identities=20% Similarity=0.287 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcEE---eCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~i~~~~~--~ 139 (255)
++.++||+|+ |.+|...++.+...|. +|+++++++++.+.+ ++.+.... .|..+ +..+.+.+.+... +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 3578999998 9999999999888999 899999988765443 33343221 24333 1233333333221 2
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|.++.++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998864
No 231
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.05 E-value=0.0019 Score=50.39 Aligned_cols=103 Identities=19% Similarity=0.236 Sum_probs=65.9
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHH----hcCCcEEeCCCCCCchHHHHHHhh
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL 136 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~i~~~ 136 (255)
+.+...++++++||-.|+|. |..++.+++..+. .+|++++.+++-.+.++ +.|.+.+.-.. .+..+...
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~---~d~~~~~~-- 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIV---GDGTQGWE-- 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEE---CCcccCCc--
Confidence 45667889999999999874 7777777776653 26999999988776664 34543221001 11111110
Q ss_pred cCCCccEEEecCCcHHHHHHHHHHhccCCceEEEE
Q 025264 137 TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 137 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
..+.||+|+-....+...+...+.|+++ |+++..
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 1127999985544444467788999997 998764
No 232
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0045 Score=49.52 Aligned_cols=78 Identities=17% Similarity=0.152 Sum_probs=51.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cC----CcE-EeCCCCCCchHHHHHHhhcC--CCc
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FG----VTE-FVNPKDHDKPIQQVLVDLTD--GGV 141 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g----~~~-vi~~~~~~~~~~~~i~~~~~--~~~ 141 (255)
+.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +. ... ..|-.+ ++.+.+.+.+... +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 368999997 9999999998888999 99999998877665432 21 111 123332 1233333333222 258
Q ss_pred cEEEecCCc
Q 025264 142 DYSFECIGN 150 (255)
Q Consensus 142 d~v~d~~g~ 150 (255)
|+++++.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998773
No 233
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0044 Score=49.48 Aligned_cols=80 Identities=21% Similarity=0.238 Sum_probs=52.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hc---CCc---EEeCCCCCCchHHHHHHhhcC--
Q 025264 69 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVT---EFVNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 69 ~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~---g~~---~vi~~~~~~~~~~~~i~~~~~-- 138 (255)
.++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+. ++ +.. ...|..+ ++.+...+.+...
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERF 80 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHc
Confidence 35688999997 9999999999999999 9999999887655542 22 321 1233332 1233333333221
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+.+|+++.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 368999998874
No 234
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.04 E-value=0.0041 Score=49.40 Aligned_cols=78 Identities=21% Similarity=0.372 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE---EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|-.+ +....+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999997 9999999999999999 999999887665544 2234321 223222 1233333333322 2
Q ss_pred CccEEEecCC
Q 025264 140 GVDYSFECIG 149 (255)
Q Consensus 140 ~~d~v~d~~g 149 (255)
++|.++++.|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 235
>PLN02366 spermidine synthase
Probab=97.04 E-value=0.0093 Score=49.03 Aligned_cols=102 Identities=17% Similarity=0.125 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc--EEeCCCCC---CchHHHHHHhhcCCCcc
Q 025264 68 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVD 142 (255)
Q Consensus 68 ~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~--~vi~~~~~---~~~~~~~i~~~~~~~~d 142 (255)
..+.++|||.|+|. |..+..++++.+..+|++++.+++-.+.+++.-.. ..++.... ..+-.+.+++..++.||
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence 34568999999875 66777888876665899999988877777663110 00100000 02222233333234799
Q ss_pred EEE-ecCCc---------HHHHHHHHHHhccCCceEEEE
Q 025264 143 YSF-ECIGN---------VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 143 ~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 171 (255)
+|+ |+... ..-++.+.+.|+++ |.++.-
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q 205 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQ 205 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEC
Confidence 998 44321 12377888999997 998654
No 236
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.02 E-value=0.0055 Score=48.61 Aligned_cols=79 Identities=20% Similarity=0.326 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcch--HHHHHhcCCc--E-EeCCCCCCchHHHHHHhhcC--CCc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVT--E-FVNPKDHDKPIQQVLVDLTD--GGV 141 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~--~~~~~~~g~~--~-vi~~~~~~~~~~~~i~~~~~--~~~ 141 (255)
+++++||+|+ |++|...++.+...|+ +|+++++++.. .+.+++.+.. . ..|..+ +..+...+.+... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4689999998 8999999998889999 99999986521 2233444432 1 123332 2333333333322 269
Q ss_pred cEEEecCCc
Q 025264 142 DYSFECIGN 150 (255)
Q Consensus 142 d~v~d~~g~ 150 (255)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 237
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.02 E-value=0.0078 Score=49.65 Aligned_cols=91 Identities=21% Similarity=0.368 Sum_probs=62.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCc
Q 025264 72 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 150 (255)
Q Consensus 72 ~~vlI~G~g~vG~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 150 (255)
.+|.|+|+|.+|...++.++..|. .+|++.++++++.+.+++.|....+. .+..+.+ ..+|+|+.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHHh-----cCCCEEEECCCH
Confidence 579999999999999999888884 38999999998888888887532111 1222222 158999999986
Q ss_pred HHH---HHHHHHHhccCCceEEEEcc
Q 025264 151 VSV---MRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 151 ~~~---~~~~~~~l~~~~G~~v~~g~ 173 (255)
... ++.....++++ ..++.+|.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 541 23333455664 66666655
No 238
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.02 E-value=0.0066 Score=46.81 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
.+.+|+|.|+|++|..+++.+...|+.+++.++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 44789999999999999999999999889999876
No 239
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.0037 Score=50.20 Aligned_cols=79 Identities=25% Similarity=0.323 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hc--CCc---EEeCCCCCCchHHHHHHhhcC-
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NF--GVT---EFVNPKDHDKPIQQVLVDLTD- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~--g~~---~vi~~~~~~~~~~~~i~~~~~- 138 (255)
++++++|+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +. +.. ...|-.+ ++...+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4689999998 8999999999999999 9999999887665442 11 111 1124333 1223222332221
Q ss_pred -CCccEEEecCCc
Q 025264 139 -GGVDYSFECIGN 150 (255)
Q Consensus 139 -~~~d~v~d~~g~ 150 (255)
+.+|+++++.|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 369999999884
No 240
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.02 E-value=0.0071 Score=47.65 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=51.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-HHHHHhcCCcEE-eCCCCCCchHHHHHHhhcC--CCccEEE
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSF 145 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~-~~~~~~~g~~~v-i~~~~~~~~~~~~i~~~~~--~~~d~v~ 145 (255)
++++||+|+ |++|...++.+...|+ +|+++++++++ .+.+++.++..+ .|..+ +....+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 468999997 8999999999989999 99999987654 333444554322 23332 1233333333322 2699999
Q ss_pred ecCCc
Q 025264 146 ECIGN 150 (255)
Q Consensus 146 d~~g~ 150 (255)
++.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98874
No 241
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0076 Score=48.19 Aligned_cols=82 Identities=23% Similarity=0.290 Sum_probs=51.2
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCCcch-HHH----HHhcCC-c-EE--eCCCCCCchHHHHHHh
Q 025264 67 KVEPGSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKK-FDR----AKNFGV-T-EF--VNPKDHDKPIQQVLVD 135 (255)
Q Consensus 67 ~~~~~~~vlI~G~-g~vG~~a~~l~~~~g-~~~v~~~~~~~~~-~~~----~~~~g~-~-~v--i~~~~~~~~~~~~i~~ 135 (255)
.+..+.+|||+|+ |++|...++-+...| + +|+++++++++ .+. +++.+. . ++ .|..+ +....+.+++
T Consensus 4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~ 81 (253)
T PRK07904 4 AVGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDA 81 (253)
T ss_pred ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHH
Confidence 3456789999998 999999998777674 8 99999998775 333 233332 1 12 34332 1233333333
Q ss_pred hcC-CCccEEEecCCc
Q 025264 136 LTD-GGVDYSFECIGN 150 (255)
Q Consensus 136 ~~~-~~~d~v~d~~g~ 150 (255)
... +++|+++.+.|.
T Consensus 82 ~~~~g~id~li~~ag~ 97 (253)
T PRK07904 82 AFAGGDVDVAIVAFGL 97 (253)
T ss_pred HHhcCCCCEEEEeeec
Confidence 222 379998877764
No 242
>PRK06128 oxidoreductase; Provisional
Probab=97.01 E-value=0.011 Score=48.58 Aligned_cols=102 Identities=19% Similarity=0.219 Sum_probs=61.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcch--H----HHHHhcCCcEE---eCCCCCCchHHHHHHhhcC-
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--F----DRAKNFGVTEF---VNPKDHDKPIQQVLVDLTD- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~--~----~~~~~~g~~~v---i~~~~~~~~~~~~i~~~~~- 138 (255)
.++++||+|+ |++|.++++.+...|+ +|+.+.++.+. . +.+++.|.... .|-.+ .....+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 4689999997 9999999999999999 88887654332 1 12233443221 23332 1222222332221
Q ss_pred -CCccEEEecCCcHH--------------------------HHHHHHHHhccCCceEEEEccC
Q 025264 139 -GGVDYSFECIGNVS--------------------------VMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 139 -~~~d~v~d~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
+++|+++++.|... ..+.+++.+..+ |+++.++..
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~ 193 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI 193 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence 36999999887310 123444455665 898888664
No 243
>PRK00811 spermidine synthase; Provisional
Probab=97.01 E-value=0.0051 Score=50.06 Aligned_cols=95 Identities=15% Similarity=0.178 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC------C---c--EEeCCCCCCchHHHHHHhhc
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG------V---T--EFVNPKDHDKPIQQVLVDLT 137 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g------~---~--~vi~~~~~~~~~~~~i~~~~ 137 (255)
...++||++|+|. |..+..++++.+..+|++++.+++-.+.+++.- . . .++. .+..+.+.+ +
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~-----~Da~~~l~~-~ 147 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI-----GDGIKFVAE-T 147 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE-----CchHHHHhh-C
Confidence 3457999999875 777778888767669999999998888876521 1 1 1111 222333333 3
Q ss_pred CCCccEEEe-cCCc---------HHHHHHHHHHhccCCceEEEE
Q 025264 138 DGGVDYSFE-CIGN---------VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 138 ~~~~d~v~d-~~g~---------~~~~~~~~~~l~~~~G~~v~~ 171 (255)
.+.||+|+- +... ..-++.+.+.|+++ |.++.-
T Consensus 148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~ 190 (283)
T PRK00811 148 ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQ 190 (283)
T ss_pred CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence 347999984 3211 22256778899997 988865
No 244
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0064 Score=47.62 Aligned_cols=74 Identities=19% Similarity=0.236 Sum_probs=49.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCcEE-eCCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 73 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 73 ~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
+++|+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++.+...+ .|-.+ +..+.+.+.+.. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHHh-hcCcEEEECCC
Confidence 5899987 9999999999988999 999999988776655 34444332 34333 122333333332 25899998765
No 245
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.00 E-value=0.018 Score=42.73 Aligned_cols=88 Identities=20% Similarity=0.251 Sum_probs=59.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHH
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 152 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~ 152 (255)
+|-++|.|.+|...++-+...|. +|.+.++++++.+.+.+.|+... .+..+.+. ..|+|+-|+....
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~-----~~dvvi~~v~~~~ 69 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAE-----QADVVILCVPDDD 69 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHH-----HBSEEEE-SSSHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhhhHhh-----cccceEeecccch
Confidence 68889999999999999999999 99999999999999988885432 23333343 3689998888755
Q ss_pred HHHHHHH------HhccCCceEEEEccC
Q 025264 153 VMRAALE------CCHKGWGTSVIVGVA 174 (255)
Q Consensus 153 ~~~~~~~------~l~~~~G~~v~~g~~ 174 (255)
..+..+. .+.++ ..++.++..
T Consensus 70 ~v~~v~~~~~i~~~l~~g-~iiid~sT~ 96 (163)
T PF03446_consen 70 AVEAVLFGENILAGLRPG-KIIIDMSTI 96 (163)
T ss_dssp HHHHHHHCTTHGGGS-TT-EEEEE-SS-
T ss_pred hhhhhhhhhHHhhccccc-eEEEecCCc
Confidence 4555443 34453 566655543
No 246
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=97.00 E-value=0.0019 Score=51.10 Aligned_cols=107 Identities=20% Similarity=0.317 Sum_probs=67.5
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHH----hcCCc-EE-eCCCC-CCchHHHHH
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVT-EF-VNPKD-HDKPIQQVL 133 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~----~~g~~-~v-i~~~~-~~~~~~~~i 133 (255)
+....+++||++|+--|.|+ |.+...+++..|. .+|+..+.++++.+.++ ..|.. .+ +..++ +...+.+.+
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~ 110 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEEL 110 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccccc
Confidence 55778999999999988654 6677778877763 39999999998887774 35543 22 21221 011221111
Q ss_pred HhhcCCCccEEE-ecCCcHHHHHHHHHHh-ccCCceEEEEccC
Q 025264 134 VDLTDGGVDYSF-ECIGNVSVMRAALECC-HKGWGTSVIVGVA 174 (255)
Q Consensus 134 ~~~~~~~~d~v~-d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~ 174 (255)
.+.+|.|| |-...-..++.+.+.| +++ |+++.+...
T Consensus 111 ----~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP~ 148 (247)
T PF08704_consen 111 ----ESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSPC 148 (247)
T ss_dssp ----TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEESS
T ss_pred ----cCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCC
Confidence 12689887 7666655689999999 896 999988553
No 247
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.00 E-value=0.065 Score=41.43 Aligned_cols=93 Identities=20% Similarity=0.182 Sum_probs=61.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcc-hHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 148 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 148 (255)
.|.+|||.|+|.+|..-++.+...|+ +|++++.... ..+.+.+.|--..+. .+ .. .+.+ .++++|+-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~--~~-~~dl-----~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC--FD-ADIL-----EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC--CC-HHHh-----CCcEEEEECC
Confidence 46799999999999999999999999 9999986543 233333333212222 11 11 1111 2699999999
Q ss_pred CcHHHHHHHHHHhccCCceEEEEcc
Q 025264 149 GNVSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 149 g~~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
+.+..-..+....+.. |..+.+..
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d 101 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVD 101 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECC
Confidence 9986455666677775 77775543
No 248
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.003 Score=50.86 Aligned_cols=76 Identities=26% Similarity=0.383 Sum_probs=50.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEE-eCCCCCCchHHHHHHhhcC--CCccEEEe
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSFE 146 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~i~~~~~--~~~d~v~d 146 (255)
+++++|+|+ |++|...++.+...|+ +|+++++++++.+.. .+...+ .|..+ ++.+.+.+.+... +.+|++++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTD-DASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCC-HHHHHHHHHHHHHhCCCCCEEEE
Confidence 468999997 9999999998888999 999999876654332 223222 23333 2334443433322 26999999
Q ss_pred cCCc
Q 025264 147 CIGN 150 (255)
Q Consensus 147 ~~g~ 150 (255)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9884
No 249
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.00 E-value=0.0033 Score=50.80 Aligned_cols=44 Identities=25% Similarity=0.357 Sum_probs=39.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 113 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~ 113 (255)
++++++|.|+|+.+.+++.-++..|+.+++++.|+.+|.+.+.+
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 57899999999999999999999998799999999998877754
No 250
>PRK14967 putative methyltransferase; Provisional
Probab=96.99 E-value=0.019 Score=45.05 Aligned_cols=97 Identities=22% Similarity=0.236 Sum_probs=63.4
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc-EEeCCCCCCchHHHHHHhhcC
Q 025264 64 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFVNPKDHDKPIQQVLVDLTD 138 (255)
Q Consensus 64 ~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~i~~~~~ 138 (255)
....++++++||-.|+|. |..+..+++. ++.+|++++.+++..+.+++ .+.. .+++ .++.+.+ ..
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~-----~d~~~~~---~~ 99 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR-----GDWARAV---EF 99 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE-----Cchhhhc---cC
Confidence 445678899999999986 8888888775 54599999999887776543 3432 1222 2232221 12
Q ss_pred CCccEEEecCCc---------------------------HHHHHHHHHHhccCCceEEEE
Q 025264 139 GGVDYSFECIGN---------------------------VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 139 ~~~d~v~d~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~ 171 (255)
+.||+|+....- ...++.+.+.|+++ |+++.+
T Consensus 100 ~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 100 RPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred CCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 379999864210 11245678899997 998865
No 251
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.99 E-value=0.021 Score=43.72 Aligned_cols=103 Identities=23% Similarity=0.344 Sum_probs=64.1
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHh----cCCcE--EeCCCCCCchHHHHHH
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLV 134 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~-g~~~v~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~i~ 134 (255)
+.....++++++||-.|+|. |..++.+++.. +. +|++++.+++..+.+++ .+... ++. .+..+.+.
T Consensus 32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~-~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~-----~d~~~~~~ 104 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKG-RVIAIERDEEVVNLIRRNCDRFGVKNVEVIE-----GSAPECLA 104 (196)
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE-----CchHHHHh
Confidence 44666788999999998764 55666666654 45 99999999988777643 45432 222 22222222
Q ss_pred hhcCCCccEE-EecCCc-HHHHHHHHHHhccCCceEEEEcc
Q 025264 135 DLTDGGVDYS-FECIGN-VSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 135 ~~~~~~~d~v-~d~~g~-~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
... ..+|.+ ++.... ...++.+.+.|+++ |+++....
T Consensus 105 ~~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 105 QLA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred hCC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 221 124444 443222 34578889999997 99887744
No 252
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.99 E-value=0.0046 Score=54.08 Aligned_cols=78 Identities=31% Similarity=0.404 Sum_probs=55.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCc---------------------chHHHHHhcCCcEEeCCCCCCch
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDHDKP 128 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~---------------------~~~~~~~~~g~~~vi~~~~~~~~ 128 (255)
++++|+|.|+|+.|+.++..++..|. +|++++..+ ...+.++++|++..++..-. .+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-RD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-Cc
Confidence 57899999999999999999999999 899887654 23566778898766654320 11
Q ss_pred HHHHHHhhcCCCccEEEecCCcHH
Q 025264 129 IQQVLVDLTDGGVDYSFECIGNVS 152 (255)
Q Consensus 129 ~~~~i~~~~~~~~d~v~d~~g~~~ 152 (255)
+ .+.+.. ..+|.||.++|...
T Consensus 218 ~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 218 I--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred c--CHHHHH-hcCCEEEEEeCCCC
Confidence 1 111111 16999999999743
No 253
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.98 E-value=0.015 Score=46.66 Aligned_cols=104 Identities=22% Similarity=0.313 Sum_probs=60.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcc-------------------hH----HHHHhcCCc-EEeCCCCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------KF----DRAKNFGVT-EFVNPKDH 125 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~-------------------~~----~~~~~~g~~-~vi~~~~~ 125 (255)
.+.+|+|.|+|++|..++..+...|..+++.++.+.- |. +.++++... .+....+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~- 107 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD- 107 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec-
Confidence 4578999999999999999999999878988885421 11 111223321 1211111
Q ss_pred CchHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccCC
Q 025264 126 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 126 ~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
.-..+.+.++....+|+|+||.+....-..+.+.+...+-.++..|...
T Consensus 108 -~i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag 156 (268)
T PRK15116 108 -FITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAG 156 (268)
T ss_pred -ccChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 0001122222223699999999985534445555554314666666543
No 254
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.98 E-value=0.023 Score=37.97 Aligned_cols=85 Identities=22% Similarity=0.330 Sum_probs=57.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CCeEEEE-cCCcchHHHH-HhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAG---ASRVIGI-DIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g---~~~v~~~-~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
+|.|+|+|.+|.+.++-+...| . +|+.+ .+++++.+.+ ++.+..... .+..+.++ ..|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhc-----cCCEEEEE
Confidence 4678899999999999999998 6 88855 9999988887 556644321 23444444 37999999
Q ss_pred CCcHHHHHHHHHHh---ccCCceEEEE
Q 025264 148 IGNVSVMRAALECC---HKGWGTSVIV 171 (255)
Q Consensus 148 ~g~~~~~~~~~~~l---~~~~G~~v~~ 171 (255)
+.... +...++.+ .++ ..++.+
T Consensus 69 v~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 69 VKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred ECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 98877 66665554 343 455544
No 255
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.98 E-value=0.006 Score=49.02 Aligned_cols=78 Identities=21% Similarity=0.261 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcch----HHHHHhcC-Cc-EEeCCCCCCchH---HHHHHhhcCC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK----FDRAKNFG-VT-EFVNPKDHDKPI---QQVLVDLTDG 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~----~~~~~~~g-~~-~vi~~~~~~~~~---~~~i~~~~~~ 139 (255)
.|+.|||+|+ +++|.+.++=...+|+ +++..+.+++. .+.+++.| +. .+.|-.+ .++. .+++++..+
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~G- 113 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEVG- 113 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhcC-
Confidence 6899999987 7999998877777899 88888877654 33445555 32 3344332 1333 334444333
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|++++++|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 79999998884
No 256
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.97 E-value=0.01 Score=48.38 Aligned_cols=43 Identities=28% Similarity=0.360 Sum_probs=38.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 112 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~ 112 (255)
++.+|+|.|+|++|.+++..+...|+.+|+++.++.++.+.+.
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 5578999999999999999999999878999999988877663
No 257
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0033 Score=50.57 Aligned_cols=78 Identities=23% Similarity=0.318 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE---EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
+++++||+|+ |++|...++.+...|+ +|+++++++++.+.. .+.+... .+|..+ +..+...+++... +
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999997 9999999999999999 999999887665433 2223221 134332 1233333443322 2
Q ss_pred CccEEEecCC
Q 025264 140 GVDYSFECIG 149 (255)
Q Consensus 140 ~~d~v~d~~g 149 (255)
++|+++.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 6899998876
No 258
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0046 Score=49.15 Aligned_cols=79 Identities=22% Similarity=0.250 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hc--CCc-EE--eCCCCCCchHHHHHHhhcC--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVT-EF--VNPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~--g~~-~v--i~~~~~~~~~~~~i~~~~~--~~ 140 (255)
++.+++|+|+ |.+|...++.+...|+ +|+.++++.++.+... ++ +.. .+ .|..+ +..+.+.+.+... ++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS-AEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4578999998 9999999988888899 9999998876654432 22 321 11 23332 1223333332221 37
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999998884
No 259
>PRK06194 hypothetical protein; Provisional
Probab=96.96 E-value=0.0049 Score=50.14 Aligned_cols=78 Identities=23% Similarity=0.319 Sum_probs=50.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hh---cCCcE-E--eCCCCCCchHHHHHHhhc--CCC
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 140 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~---~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 140 (255)
+.++||+|+ |++|..+++.+...|+ +|++++++.++.+.. .+ .+... + .|..+ .+.+.+.+.... .++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFGA 83 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 578999997 9999999999999999 999999887655443 22 23321 1 23332 122322222221 136
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++++.|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999998885
No 260
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.95 E-value=0.0045 Score=49.38 Aligned_cols=79 Identities=29% Similarity=0.394 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE-E--eCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 139 (255)
.++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++.|... . .|..+ ++.+.+.+.+... +
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 4689999997 9999999998888999 999999887665443 2233221 1 24333 1233333333221 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|+++.+.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 69999998874
No 261
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0056 Score=49.49 Aligned_cols=77 Identities=21% Similarity=0.214 Sum_probs=51.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc-CC--cE-EeCCCCCCchHHHHHHhhcC--CCccEE
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GV--TE-FVNPKDHDKPIQQVLVDLTD--GGVDYS 144 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~-g~--~~-vi~~~~~~~~~~~~i~~~~~--~~~d~v 144 (255)
.++||+|+ |.+|...++.+...|. +|+++++++++.+.+++. +. .. ..|..+ ...+.+.+.+... +++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 57999997 9999999998888999 999999988777666442 22 11 123332 1223333333221 368999
Q ss_pred EecCCc
Q 025264 145 FECIGN 150 (255)
Q Consensus 145 ~d~~g~ 150 (255)
+.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998874
No 262
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.0053 Score=48.88 Aligned_cols=79 Identities=24% Similarity=0.348 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc-EE--eCCCCCCchHHHHHHhhc--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVT-EF--VNPKDHDKPIQQVLVDLT--DG 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~-~v--i~~~~~~~~~~~~i~~~~--~~ 139 (255)
++++++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.+.. .. .|-.+ +..+.+.+.+.. .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4689999998 9999999988888999 999999987765443 233322 11 23222 122322222221 13
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 263
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.0064 Score=50.27 Aligned_cols=79 Identities=20% Similarity=0.158 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hhc-----CCc--E-EeCCCCCCchHHHHHHhhcC-
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVT--E-FVNPKDHDKPIQQVLVDLTD- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~-----g~~--~-vi~~~~~~~~~~~~i~~~~~- 138 (255)
++++++|+|+ +++|.++++.+...|+ +|+.+++++++.+.+ +++ +.. . ..|-.+ .....+...+...
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4679999998 8999999998888999 999999988765544 221 111 1 124333 1222222222221
Q ss_pred -CCccEEEecCCc
Q 025264 139 -GGVDYSFECIGN 150 (255)
Q Consensus 139 -~~~d~v~d~~g~ 150 (255)
+.+|+++++.|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 269999988873
No 264
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.93 E-value=0.006 Score=55.56 Aligned_cols=76 Identities=26% Similarity=0.318 Sum_probs=56.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcc---------------------hHHHHHhcCCcEEeCCCCC-Cc
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-DK 127 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~---------------------~~~~~~~~g~~~vi~~~~~-~~ 127 (255)
.+++|+|+|+|+.|+.+++.++..|. +|+++++.+. ..++++++|++..++..-. +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 9999987653 4566678888766665320 11
Q ss_pred hHHHHHHhhcCCCccEEEecCCcH
Q 025264 128 PIQQVLVDLTDGGVDYSFECIGNV 151 (255)
Q Consensus 128 ~~~~~i~~~~~~~~d~v~d~~g~~ 151 (255)
.+.+ +. ..+|.||.++|..
T Consensus 388 ~~~~-l~----~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSD-LT----SEYDAVFIGVGTY 406 (639)
T ss_pred CHHH-HH----hcCCEEEEeCCCC
Confidence 2221 11 2699999999864
No 265
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0054 Score=49.10 Aligned_cols=79 Identities=23% Similarity=0.318 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hc-----CCc--E-EeCCCCCCchHHHHHHhhcC-
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVT--E-FVNPKDHDKPIQQVLVDLTD- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~-----g~~--~-vi~~~~~~~~~~~~i~~~~~- 138 (255)
.+++++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ++ +.. . ..|..+ +..+.+.+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4678999997 9999999999999999 9999998877665542 22 211 1 123332 1233333333221
Q ss_pred -CCccEEEecCCc
Q 025264 139 -GGVDYSFECIGN 150 (255)
Q Consensus 139 -~~~d~v~d~~g~ 150 (255)
+.+|+++++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 369999998873
No 266
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.93 E-value=0.0057 Score=49.70 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCcEEeCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
..+.+++|+|+|++|.+++..+...|+.+|+++.|+.++.+.+.+ ++....+.. + .+..+.+ ..+|+|++|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~--~~~~~~~-----~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D--LELQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c--ccchhcc-----ccCCEEEEC
Confidence 356789999999999999999999995599999999888766643 331100111 0 1111111 268999999
Q ss_pred CCcHH
Q 025264 148 IGNVS 152 (255)
Q Consensus 148 ~g~~~ 152 (255)
+....
T Consensus 193 Tp~g~ 197 (278)
T PRK00258 193 TSAGM 197 (278)
T ss_pred CcCCC
Confidence 87543
No 267
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0058 Score=48.44 Aligned_cols=79 Identities=24% Similarity=0.198 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE---EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
++.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+ +..+... ..|-.+ ++.+.+.+.+... +
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4689999997 9999999999999999 999999887765544 2233221 124333 1222222222211 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|+++.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999885
No 268
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0051 Score=49.03 Aligned_cols=77 Identities=19% Similarity=0.245 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcE-EeCCCCCCchHHHHHHhhcC--CCccEEE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD--GGVDYSF 145 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~i~~~~~--~~~d~v~ 145 (255)
.++++||+|+ |++|...++.+...|+ +|+.+++++++. .....+.. ..|..+ +..+.+.+.+... +.+|+++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 80 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDVLV 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999997 9999999999999999 999999876541 11111221 123332 1223333333221 3689999
Q ss_pred ecCCc
Q 025264 146 ECIGN 150 (255)
Q Consensus 146 d~~g~ 150 (255)
.+.|.
T Consensus 81 ~~ag~ 85 (252)
T PRK07856 81 NNAGG 85 (252)
T ss_pred ECCCC
Confidence 98873
No 269
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.90 E-value=0.0038 Score=50.78 Aligned_cols=76 Identities=13% Similarity=0.054 Sum_probs=51.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcCCc-EEeCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g~~-~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
++.+++|+|+|+.+.+++..+...|+.+|+++.|+.++.+.+. +++.. .+... ..+ +++.... ..+|+|++|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~----~~~-~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRL----EGD-SGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceec----cch-hhhhhcc-cCCCEEEEC
Confidence 5789999999999999999999999878999999988877763 33321 11100 000 1111111 258999999
Q ss_pred CCcH
Q 025264 148 IGNV 151 (255)
Q Consensus 148 ~g~~ 151 (255)
+...
T Consensus 198 Tp~g 201 (282)
T TIGR01809 198 VPAD 201 (282)
T ss_pred CCCC
Confidence 8753
No 270
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.90 E-value=0.0065 Score=48.59 Aligned_cols=79 Identities=25% Similarity=0.368 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc---EEeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT---EFVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~---~vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
++.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+. ..+.. ...|..+ +..+.+.+.+... +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4689999997 9999999999888999 9999999887665543 22322 1123333 1233322332221 2
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|.++.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 271
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.88 E-value=0.023 Score=44.76 Aligned_cols=102 Identities=25% Similarity=0.312 Sum_probs=59.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcc-------------------hHH----HHHhcCCcEEeCCCCCCc
Q 025264 71 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------KFD----RAKNFGVTEFVNPKDHDK 127 (255)
Q Consensus 71 ~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~-------------------~~~----~~~~~g~~~vi~~~~~~~ 127 (255)
+.+|+|.|+|++|..++..+...|..+++.++...- |.+ .++++....-+...+ .
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--~ 88 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--E 88 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee--e
Confidence 368999999999999999999999989988885431 111 112222211111111 1
Q ss_pred hH-HHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccC
Q 025264 128 PI-QQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 128 ~~-~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
.+ .+...++....+|+|+||......-..+.+.+...+-.++..+..
T Consensus 89 ~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~g~ 136 (231)
T cd00755 89 FLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSMGA 136 (231)
T ss_pred ecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 11 122223332369999999998774444555555531355555443
No 272
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.88 E-value=0.014 Score=47.30 Aligned_cols=94 Identities=18% Similarity=0.250 Sum_probs=65.2
Q ss_pred ccccchhhhhhHHHhhcCC-CCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCc
Q 025264 50 LLGCGVPTGLGAVWNTAKV-EPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 127 (255)
Q Consensus 50 ~~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~g-~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 127 (255)
.+||+....+. +.+...+ -.|++|+|.|.| .+|.-++.++...|+ +|++..+.. .
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------~ 193 (286)
T PRK14175 137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------K 193 (286)
T ss_pred CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------h
Confidence 45543333333 3344443 478999999985 599999999999999 888877431 2
Q ss_pred hHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccC
Q 025264 128 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 128 ~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
++.+.++ .+|+|+.++|.+..+.. +.++++ ..++.+|..
T Consensus 194 ~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 194 DMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred hHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 2333333 48999999999874444 468886 888888874
No 273
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0055 Score=49.02 Aligned_cols=77 Identities=21% Similarity=0.324 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-c----CCc-EE--eCCCCCCchHHHHHHhhcCCC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F----GVT-EF--VNPKDHDKPIQQVLVDLTDGG 140 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~----g~~-~v--i~~~~~~~~~~~~i~~~~~~~ 140 (255)
.+++++|+|+ +++|...++.+...|+ +|+++++++++.+.+.+ + +.. .. .|-.+ +..+.+.+... +.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~--g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAEA--GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHh--CC
Confidence 4689999997 8999999998889999 99999998876655421 1 221 11 23322 12232323222 37
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++++.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 274
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.88 E-value=0.023 Score=44.66 Aligned_cols=92 Identities=18% Similarity=0.209 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCC----cch--------HHHHHhcCCcEEeCCCCCCchHHHHHH
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGAS--RVIGIDID----PKK--------FDRAKNFGVTEFVNPKDHDKPIQQVLV 134 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~--~v~~~~~~----~~~--------~~~~~~~g~~~vi~~~~~~~~~~~~i~ 134 (255)
-++.+++|+|+|+.|..++..+...|++ +++.++++ .++ .+++++.+... . + .++.+.++
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~--~~l~~~l~ 96 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G--GTLKEALK 96 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c--CCHHHHHh
Confidence 4568999999999999999999999997 79999987 343 22334433211 1 1 23434443
Q ss_pred hhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEc
Q 025264 135 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 172 (255)
Q Consensus 135 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 172 (255)
++|+++++++....-+..++.+.++ ..++.+.
T Consensus 97 -----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 97 -----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred -----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 4899999997333124666777775 5555443
No 275
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.87 E-value=0.0073 Score=48.29 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcEE---eCCCCCCchHHHHHHhhc--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~ 139 (255)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++.+.... .|..+ +..+.+.+.+.. .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4679999998 9999999999999999 999999988655443 33443321 23332 122222222221 12
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|+++.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 276
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.87 E-value=0.0083 Score=47.90 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCc-chHHHHHhcCCcEE-eCCCCCCchHHHHHHhhcC--CCccEE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYS 144 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~-~~~~~~~~~g~~~v-i~~~~~~~~~~~~i~~~~~--~~~d~v 144 (255)
.+.+++|+|+ |++|.+.++.+...|+ +|+++.++. +..+.+++.+...+ .|-.+ +..+.+.+.+... +++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4678999997 9999999999999999 888776543 33444444343322 23333 1333333333221 369999
Q ss_pred EecCCc
Q 025264 145 FECIGN 150 (255)
Q Consensus 145 ~d~~g~ 150 (255)
+.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 277
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0056 Score=48.77 Aligned_cols=78 Identities=21% Similarity=0.290 Sum_probs=51.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc-EEe--CCCCCCchHHHHHHhhcC--CC
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFV--NPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~-~vi--~~~~~~~~~~~~i~~~~~--~~ 140 (255)
++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+.. ..+ |-.+ +..+.+.+.+... +.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence 468999997 8999999999999999 99999988776555422 2221 122 3332 1233333333221 36
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++++.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999998873
No 278
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.87 E-value=0.0078 Score=51.33 Aligned_cols=90 Identities=30% Similarity=0.402 Sum_probs=55.4
Q ss_pred EEEEcCChHHHHHHHHHHHcCCC-eEEEEcCCcchHHHHHh--cC--Cc-EEeCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 74 VAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKN--FG--VT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 74 vlI~G~g~vG~~a~~l~~~~g~~-~v~~~~~~~~~~~~~~~--~g--~~-~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
|+|+|+|.+|..+++.+...+-. +|++.+++.++.+.+.+ .+ .. ..+|..+ . +.+.++.. +.|+|++|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~--~---~~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND--P---ESLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT--H---HHHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC--H---HHHHHHHh-cCCEEEEC
Confidence 68999999999999999877643 79999999999777754 22 22 2234332 2 12333332 47999999
Q ss_pred CCcHHHHHHHHHHhccCCceEEE
Q 025264 148 IGNVSVMRAALECCHKGWGTSVI 170 (255)
Q Consensus 148 ~g~~~~~~~~~~~l~~~~G~~v~ 170 (255)
+|......-+-.++..+ -.++.
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CccchhHHHHHHHHHhC-CCeec
Confidence 99875334444455554 56655
No 279
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.008 Score=47.99 Aligned_cols=78 Identities=27% Similarity=0.373 Sum_probs=50.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcC---CcE-EeCCCCCCchHHHHHHhhcC--CCcc
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG---VTE-FVNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g---~~~-vi~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. ++. +.. ..|-.+ .+.+...+.+... +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 468999998 8999999988888999 9999999887765543 221 221 123332 1222233332211 2689
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99998874
No 280
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.86 E-value=0.025 Score=41.72 Aligned_cols=81 Identities=16% Similarity=0.281 Sum_probs=54.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
.|.+|+|.|+|.+|..-++.+...|+ +|++++ ++..+.+++++.-.+ ..+ .+.+. ++ .++|+|+-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~----~~~~~--dl--~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQK----TFSND--DI--KDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eec----ccChh--cC--CCceEEEECCC
Confidence 56899999999999999998888999 998884 454455555542222 111 11110 01 26999999999
Q ss_pred cHHHHHHHHHHhcc
Q 025264 150 NVSVMRAALECCHK 163 (255)
Q Consensus 150 ~~~~~~~~~~~l~~ 163 (255)
.+. .+..+.....
T Consensus 80 d~e-~N~~i~~~a~ 92 (157)
T PRK06719 80 QHA-VNMMVKQAAH 92 (157)
T ss_pred CHH-HHHHHHHHHH
Confidence 888 6655555544
No 281
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.005 Score=48.63 Aligned_cols=80 Identities=25% Similarity=0.327 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCC---cE-EeCCCCC-Cch---HHHHHHhh
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV---TE-FVNPKDH-DKP---IQQVLVDL 136 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~---~~-vi~~~~~-~~~---~~~~i~~~ 136 (255)
++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+. +.+. .. -.|..+. ... +.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4579999997 9999999999999999 9999999887655442 2221 11 1222110 022 23334433
Q ss_pred cCCCccEEEecCCc
Q 025264 137 TDGGVDYSFECIGN 150 (255)
Q Consensus 137 ~~~~~d~v~d~~g~ 150 (255)
..+.+|+++.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32468999998884
No 282
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0097 Score=47.55 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=51.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCe-EEEEcCCcchHHH----HHhcCCcE---EeCCCCCCchHHHHHHhhcC-
Q 025264 69 EPGSIVAVFGL-GTVGLAVAEGAKAAGASR-VIGIDIDPKKFDR----AKNFGVTE---FVNPKDHDKPIQQVLVDLTD- 138 (255)
Q Consensus 69 ~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~-v~~~~~~~~~~~~----~~~~g~~~---vi~~~~~~~~~~~~i~~~~~- 138 (255)
.++++++|+|+ |++|..+++.+...|+ + |+++++++++.+. +++.+... ..|..+ +..+.+.+.....
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 81 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGA-AGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEA 81 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 35688999998 8999999999999999 6 9999987665542 23344321 234333 1222222222211
Q ss_pred -CCccEEEecCCc
Q 025264 139 -GGVDYSFECIGN 150 (255)
Q Consensus 139 -~~~d~v~d~~g~ 150 (255)
+++|.++++.|.
T Consensus 82 ~g~id~li~~ag~ 94 (260)
T PRK06198 82 FGRLDALVNAAGL 94 (260)
T ss_pred hCCCCEEEECCCc
Confidence 369999999874
No 283
>PRK05717 oxidoreductase; Validated
Probab=96.86 E-value=0.0071 Score=48.29 Aligned_cols=79 Identities=20% Similarity=0.283 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCcE---EeCCCCCCchHHHHHHhhcC--CCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE---FVNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
.+++++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++++... ..|-.+ +..+.+.+.+... +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999997 9999999999988999 999998877655444 3444221 123332 1223222333322 2689
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
+++.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
No 284
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0078 Score=48.15 Aligned_cols=77 Identities=23% Similarity=0.270 Sum_probs=52.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cC---CcE-EeCCCCCCchHHHHHHhhc---CCCcc
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FG---VTE-FVNPKDHDKPIQQVLVDLT---DGGVD 142 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g---~~~-vi~~~~~~~~~~~~i~~~~---~~~~d 142 (255)
+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ .+ ... ..|-.+ ...+.+.+.+.. .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 47999997 9999999998888999 99999998887766633 22 111 234333 123333333321 34799
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99998884
No 285
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].
Probab=96.85 E-value=0.014 Score=44.07 Aligned_cols=71 Identities=28% Similarity=0.434 Sum_probs=58.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEE
Q 025264 67 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 145 (255)
Q Consensus 67 ~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~ 145 (255)
-++||.+||=+|+|. |.+...|-...++ ...+++.++++...+.+.|.. |+. .++.+.+..+.++.||+|+
T Consensus 10 ~I~pgsrVLDLGCGd-G~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq-----~Dld~gL~~f~d~sFD~VI 80 (193)
T PF07021_consen 10 WIEPGSRVLDLGCGD-GELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQ-----GDLDEGLADFPDQSFDYVI 80 (193)
T ss_pred HcCCCCEEEecCCCc-hHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEE-----CCHHHhHhhCCCCCccEEe
Confidence 478999999999974 7777777777899 999999999999999898987 442 5666777777666899998
No 286
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.84 E-value=0.015 Score=45.38 Aligned_cols=97 Identities=24% Similarity=0.296 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc--EEeCCCCCCchHHHHHHhhcCCCccEEEe
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFE 146 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~~i~~~~~~~~d~v~d 146 (255)
-+|.+||=.|+|+ |+++ +-+...|+ +|++++-+++..+.++.-... .-+|+. ....+++...- +.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Ls-e~mAr~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~---~~~~edl~~~~-~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG-GILS-EPLARLGA-SVTGIDASEKPIEVAKLHALESGVNIDYR---QATVEDLASAG-GQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc-cHhh-HHHHHCCC-eeEEecCChHHHHHHHHhhhhccccccch---hhhHHHHHhcC-CCccEEEE
Confidence 4788999999863 5444 44455889 999999999988888632211 125565 34444444331 38999974
Q ss_pred -----cCCcHH-HHHHHHHHhccCCceEEEEcc
Q 025264 147 -----CIGNVS-VMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 147 -----~~g~~~-~~~~~~~~l~~~~G~~v~~g~ 173 (255)
-+..+. .+....++++|+ |.++.--.
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~STi 162 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLSTI 162 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEecc
Confidence 333433 357788899997 88765533
No 287
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.0073 Score=48.39 Aligned_cols=77 Identities=18% Similarity=0.282 Sum_probs=50.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE---EeCCCCCCchHHHHHHhhcC--CCc
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--GGV 141 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~~~ 141 (255)
.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +..+... ..|..+ +..+.+.+.+... +++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGGI 79 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 57999998 9999999999889999 999999987665443 2234321 123332 1233333333321 268
Q ss_pred cEEEecCCc
Q 025264 142 DYSFECIGN 150 (255)
Q Consensus 142 d~v~d~~g~ 150 (255)
|+++.+.|.
T Consensus 80 d~vi~~ag~ 88 (263)
T PRK06181 80 DILVNNAGI 88 (263)
T ss_pred CEEEECCCc
Confidence 999999874
No 288
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.0077 Score=48.76 Aligned_cols=78 Identities=19% Similarity=0.236 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCC----cE-EeCCCCCCchHHHHHHhhcC-
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV----TE-FVNPKDHDKPIQQVLVDLTD- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~----~~-vi~~~~~~~~~~~~i~~~~~- 138 (255)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ..+. .. ..|..+ ++.+.+ +.+...
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~ 78 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKE 78 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHh
Confidence 3568999998 9999999998888999 9999998877655542 2221 11 124333 123333 433321
Q ss_pred -CCccEEEecCCc
Q 025264 139 -GGVDYSFECIGN 150 (255)
Q Consensus 139 -~~~d~v~d~~g~ 150 (255)
+++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 368999998874
No 289
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.84 E-value=0.077 Score=40.90 Aligned_cols=92 Identities=13% Similarity=0.083 Sum_probs=56.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcc-hHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 148 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 148 (255)
.+.+|||.|+|.+|...++.+...|+ +|+++.+... ....+.+.+.-.. .... +.+. .+ .++|+|+-|+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~~-~~~~----~~~~--~l--~~adlViaaT 78 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIRW-KQKE----FEPS--DI--VDAFLVIAAT 78 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEEE-EecC----CChh--hc--CCceEEEEcC
Confidence 46799999999999999998888998 9998875432 1122222221111 1111 1110 01 2689999999
Q ss_pred CcHHHHHHHHHHhccCCceEEEEcc
Q 025264 149 GNVSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 149 g~~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
+.+. ++..+...... +.++.+..
T Consensus 79 ~d~e-lN~~i~~~a~~-~~lvn~~d 101 (202)
T PRK06718 79 NDPR-VNEQVKEDLPE-NALFNVIT 101 (202)
T ss_pred CCHH-HHHHHHHHHHh-CCcEEECC
Confidence 9988 55555544454 55655543
No 290
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.83 E-value=0.0075 Score=50.02 Aligned_cols=78 Identities=22% Similarity=0.206 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC---C--cE-EeCCCCCCchHHHHHHhhc--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---V--TE-FVNPKDHDKPIQQVLVDLT--DG 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g---~--~~-vi~~~~~~~~~~~~i~~~~--~~ 139 (255)
++.+++|+|+ |++|..+++.+...|+ +|+++++++++.+.+ .++. . .. ..|-.+ ...+.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 4678999997 9999999998888999 999999988776554 3332 1 11 123332 122222232221 22
Q ss_pred CccEEEecCC
Q 025264 140 GVDYSFECIG 149 (255)
Q Consensus 140 ~~d~v~d~~g 149 (255)
.+|+++++.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999887
No 291
>PLN02253 xanthoxin dehydrogenase
Probab=96.82 E-value=0.0069 Score=49.08 Aligned_cols=79 Identities=16% Similarity=0.186 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCC----cE-EeCCCCCCchHHHHHHhhcC--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV----TE-FVNPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~----~~-vi~~~~~~~~~~~~i~~~~~--~~ 140 (255)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ .+++. .. ..|-.+ +..+.+.+.+... ++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 4678999997 9999999988888999 999999876655443 33321 11 133333 1223332332221 36
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++++.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 292
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.82 E-value=0.012 Score=45.04 Aligned_cols=76 Identities=26% Similarity=0.317 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-c----CCcE-EeCCCCCCchHHHHHHhhcCCCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F----GVTE-FVNPKDHDKPIQQVLVDLTDGGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~----g~~~-vi~~~~~~~~~~~~i~~~~~~~~d 142 (255)
++.+++|+|+ |++|...+..+...|+ +|+++.++.++.+.+.+ + +... ..+..+ ..++.+.+. ++|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~-----~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-DAARAAAIK-----GAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-HHHHHHHHh-----cCC
Confidence 5689999997 9999999888888898 99999998877666532 2 2221 122211 122223332 589
Q ss_pred EEEecCCcHH
Q 025264 143 YSFECIGNVS 152 (255)
Q Consensus 143 ~v~d~~g~~~ 152 (255)
+|+.++....
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999887654
No 293
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0078 Score=47.90 Aligned_cols=78 Identities=21% Similarity=0.230 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-EE--eCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EF--VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~v--i~~~~~~~~~~~~i~~~~~--~ 139 (255)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +.+.. .. .|..+ .....+.+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999997 9999999999999999 9999998876655442 22321 11 23332 1223222333221 2
Q ss_pred CccEEEecCC
Q 025264 140 GVDYSFECIG 149 (255)
Q Consensus 140 ~~d~v~d~~g 149 (255)
.+|+++++.|
T Consensus 85 ~id~li~~ag 94 (252)
T PRK07035 85 RLDILVNNAA 94 (252)
T ss_pred CCCEEEECCC
Confidence 6899998887
No 294
>PRK08589 short chain dehydrogenase; Validated
Probab=96.82 E-value=0.0073 Score=48.79 Aligned_cols=78 Identities=22% Similarity=0.377 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HH---hcCC--cE-EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AK---NFGV--TE-FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~-~~---~~g~--~~-vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
+++++||+|+ +++|.+.++.+...|+ +|++++++ ++.+. +. +.+. .. ..|-.+ +......+.+... +
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcC
Confidence 4679999998 8999999998888999 99999988 44332 22 2232 11 234333 1233333333221 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|+++++.|.
T Consensus 82 ~id~li~~Ag~ 92 (272)
T PRK08589 82 RVDVLFNNAGV 92 (272)
T ss_pred CcCEEEECCCC
Confidence 68999998874
No 295
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0092 Score=47.32 Aligned_cols=77 Identities=18% Similarity=0.318 Sum_probs=50.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----c--CCc-E--EeCCCCCCchHHHHHHhhcC--
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----F--GVT-E--FVNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~--g~~-~--vi~~~~~~~~~~~~i~~~~~-- 138 (255)
+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ . +.. . ..|..+ +..+.+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 468999997 9999999988888898 99999998877655422 1 211 1 124433 1233333333222
Q ss_pred CCccEEEecCC
Q 025264 139 GGVDYSFECIG 149 (255)
Q Consensus 139 ~~~d~v~d~~g 149 (255)
+++|+++.+.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 26999999887
No 296
>PRK08643 acetoin reductase; Validated
Probab=96.81 E-value=0.0079 Score=47.98 Aligned_cols=78 Identities=18% Similarity=0.256 Sum_probs=50.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCcE---EeCCCCCCchHHHHHHhhcC--CC
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE---FVNPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~~---vi~~~~~~~~~~~~i~~~~~--~~ 140 (255)
++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +.+... ..|-.+ ++.+.+.+.+... ++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 568999997 9999999999999999 9999998876655442 223221 123332 1223332332221 36
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 297
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.011 Score=47.02 Aligned_cols=74 Identities=19% Similarity=0.213 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcc-hHHHHHhcCCc-EEeCCCCCCchHHHHHHhhcCCCccEEEe
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFE 146 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~-~~~~~~~~g~~-~vi~~~~~~~~~~~~i~~~~~~~~d~v~d 146 (255)
.+++++|+|+ |++|.+.++.+...|+ +|+++++++. ..+...+.... ...|-.+ . +.+.+.. +.+|++++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~-~~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDESPNEWIKWECGK--E---ESLDKQL-ASLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhccCCCeEEEeeCCC--H---HHHHHhc-CCCCEEEE
Confidence 3579999997 8999999999999999 9999988762 22221111111 1123322 2 2233332 26999999
Q ss_pred cCCc
Q 025264 147 CIGN 150 (255)
Q Consensus 147 ~~g~ 150 (255)
+.|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9874
No 298
>PRK06398 aldose dehydrogenase; Validated
Probab=96.81 E-value=0.0054 Score=49.13 Aligned_cols=74 Identities=22% Similarity=0.304 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcE-EeCCCCCCchHHHHHHhhcC--CCccEEE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD--GGVDYSF 145 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~i~~~~~--~~~d~v~ 145 (255)
+++++||+|+ +++|.+.+..+...|+ +|+++++++++.. .... ..|-.+ +..+.+.+.+... +.+|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4679999997 8999999999999999 9999998765432 1111 123332 1233333333222 2699999
Q ss_pred ecCCc
Q 025264 146 ECIGN 150 (255)
Q Consensus 146 d~~g~ 150 (255)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98873
No 299
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.81 E-value=0.0095 Score=45.86 Aligned_cols=82 Identities=30% Similarity=0.394 Sum_probs=57.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCcEEeCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
-+|.+++|.|.|.+|..+++.+...|+ +|+++++++++.+.+++ +|+. .++.. ++.. ..+|+++.|
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~--------~l~~---~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPE--------EIYS---VDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcch--------hhcc---ccCCEEEec
Confidence 367899999999999999999999999 99999998887777654 4654 33322 1111 158999866
Q ss_pred CCcHHHHHHHHHHhcc
Q 025264 148 IGNVSVMRAALECCHK 163 (255)
Q Consensus 148 ~g~~~~~~~~~~~l~~ 163 (255)
......-+..++.++.
T Consensus 93 A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 93 ALGGVINDDTIPQLKA 108 (200)
T ss_pred ccccccCHHHHHHcCC
Confidence 5544334555566654
No 300
>PRK06484 short chain dehydrogenase; Validated
Probab=96.80 E-value=0.0077 Score=53.43 Aligned_cols=79 Identities=22% Similarity=0.331 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCcE---EeCCCCCCchHHHHHHhhcC--CCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE---FVNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
+++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++... ..|-.+ ++.+.+.+.+... +++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999997 8999999999999999 999999988876655 4455322 234333 1333333333221 3699
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
+++++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998774
No 301
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.80 E-value=0.0086 Score=47.61 Aligned_cols=76 Identities=20% Similarity=0.311 Sum_probs=50.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCc--EE-eCCCCCCchHHHHHHhhcC--CCccEEE
Q 025264 73 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT--EF-VNPKDHDKPIQQVLVDLTD--GGVDYSF 145 (255)
Q Consensus 73 ~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~--~v-i~~~~~~~~~~~~i~~~~~--~~~d~v~ 145 (255)
+++|+|+ |++|.+.++.+...|+ +|+++++++++.+.+.. ++.. .+ .|-.+ ...+.+.+.+... +++|.++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 6899997 9999999999999999 99999998887766533 3432 11 23332 1233333333221 2699999
Q ss_pred ecCCc
Q 025264 146 ECIGN 150 (255)
Q Consensus 146 d~~g~ 150 (255)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 88774
No 302
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.80 E-value=0.018 Score=45.27 Aligned_cols=34 Identities=35% Similarity=0.384 Sum_probs=30.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 71 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 71 ~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
+.+|+|.|+|++|..++..+...|..+++.++.+
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4789999999999999999999999888888643
No 303
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.0094 Score=49.04 Aligned_cols=79 Identities=19% Similarity=0.180 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hhc-----CCc--E-EeCCCCCCchHHHHHHhhcC-
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVT--E-FVNPKDHDKPIQQVLVDLTD- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~-----g~~--~-vi~~~~~~~~~~~~i~~~~~- 138 (255)
.+++++|+|+ |++|..+++.+...|+ +|++++++.++.+.+ +++ +.. . ..|-.+ .+...+.+.+...
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 5689999997 9999999998888999 999999887665433 111 111 1 123333 1223333333221
Q ss_pred -CCccEEEecCCc
Q 025264 139 -GGVDYSFECIGN 150 (255)
Q Consensus 139 -~~~d~v~d~~g~ 150 (255)
+++|+++++.|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 269999998873
No 304
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.029 Score=44.32 Aligned_cols=79 Identities=18% Similarity=0.172 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-HHH----HHhcCCc-EE--eCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDR----AKNFGVT-EF--VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~-~~~----~~~~g~~-~v--i~~~~~~~~~~~~i~~~~~-- 138 (255)
++.+++|+|+ |++|...++.+...|+ +++.+.++... .+. ++..+.. .. .|-.+ +..+.+.+.+...
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4678999997 9999999999999999 88877654332 222 2233321 11 23222 1233333333211
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+++|+++.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (245)
T PRK12937 82 GRIDVLVNNAGV 93 (245)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
No 305
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.008 Score=48.69 Aligned_cols=79 Identities=24% Similarity=0.341 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE---EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +..+... ..|-.+ +.++.+.+.+... +
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999997 9999999999999999 999999887665543 2234321 123322 1223332222211 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|+++++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 306
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.79 E-value=0.028 Score=43.84 Aligned_cols=103 Identities=24% Similarity=0.285 Sum_probs=62.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcc-----hHHHH---HhcC---------------C-cEEeCCCCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-----KFDRA---KNFG---------------V-TEFVNPKDH 125 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~-----~~~~~---~~~g---------------~-~~vi~~~~~ 125 (255)
+...|+|.|.|+||.+++..+.+.|+.++..++...- +++.- ...| + .+|.-.++
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~- 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND- 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence 4578999999999999999999999988888864321 11111 1122 1 11111111
Q ss_pred CchHHHHHHhhcCCCccEEEecCCcHHH-HHHHHHHhccCCceEEEEccCC
Q 025264 126 DKPIQQVLVDLTDGGVDYSFECIGNVSV-MRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 126 ~~~~~~~i~~~~~~~~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
--..+.+.++...++|+|+||...-.. ...+..|.+.+ -.++..+..+
T Consensus 108 -f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag 156 (263)
T COG1179 108 -FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAG 156 (263)
T ss_pred -hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecccc
Confidence 112234455555589999999987552 23333355554 5777776654
No 307
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.012 Score=46.99 Aligned_cols=79 Identities=18% Similarity=0.308 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-HHH----HHhcCCc--EE-eCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDR----AKNFGVT--EF-VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~-~~~----~~~~g~~--~v-i~~~~~~~~~~~~i~~~~~-- 138 (255)
+++++||+|+ +++|.++++.+...|+ +|+++++++++ .+. ++..+.. .+ .|-.+ +..+.+.+.+...
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4679999997 8999999999999999 99999876542 222 2233422 11 23332 1233333333221
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+.+|+++++.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 368999998884
No 308
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.78 E-value=0.009 Score=48.30 Aligned_cols=79 Identities=19% Similarity=0.279 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcEE--eCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF--VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g--~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~v--i~~~~~~~~~~~~i~~~~~-- 138 (255)
+++++||+|+ + ++|.+.++.+...|+ +|+.++++++..+.+ ++.|.... .|-.+ ++...+.+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 5689999997 4 899999999999999 999988765322222 33453322 23333 1223333333222
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
|.+|+++++.|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 379999998873
No 309
>PLN03075 nicotianamine synthase; Provisional
Probab=96.78 E-value=0.012 Score=47.85 Aligned_cols=97 Identities=20% Similarity=0.153 Sum_probs=64.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHhc-----CCcEEeCCCCCCchHHHHHHhhcCCCccE
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF-----GVTEFVNPKDHDKPIQQVLVDLTDGGVDY 143 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~~-----g~~~vi~~~~~~~~~~~~i~~~~~~~~d~ 143 (255)
+.++|+-.|+|+.++.++.+++.+.. .+++.++.+++..+.+++. |...-+.... .+..+.... .+.||+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~~~~~--l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMDVTES--LKEYDV 198 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhhcccc--cCCcCE
Confidence 77899999999999999988876543 2799999999888887653 2222122221 222221111 137999
Q ss_pred EEecC-------CcHHHHHHHHHHhccCCceEEEE
Q 025264 144 SFECI-------GNVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 144 v~d~~-------g~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
||-.+ .....++.+.+.|++| |.++.=
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 98654 2344578999999996 877644
No 310
>PRK09186 flagellin modification protein A; Provisional
Probab=96.77 E-value=0.009 Score=47.61 Aligned_cols=78 Identities=22% Similarity=0.403 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hhc----CCc---E-EeCCCCCCchHHHHHHhhcC-
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVT---E-FVNPKDHDKPIQQVLVDLTD- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~----g~~---~-vi~~~~~~~~~~~~i~~~~~- 138 (255)
+++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ +++ +.. . ..|-.+ +..+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 4689999997 8999999999999999 999999887776544 222 211 1 224333 1233333333222
Q ss_pred -CCccEEEecCC
Q 025264 139 -GGVDYSFECIG 149 (255)
Q Consensus 139 -~~~d~v~d~~g 149 (255)
+++|+++++.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 26899999875
No 311
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0083 Score=47.10 Aligned_cols=74 Identities=23% Similarity=0.245 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc-EEeCCCCCCchHHHHHHhhcCC-CccEEEe
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 146 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~i~~~~~~-~~d~v~d 146 (255)
+++++||+|+ |.+|...++.+...|. +|+++.+++++ ..... ...|..+ +..+.+.+.+.... +.|+++.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD-IEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEE
Confidence 3578999998 9999999999999999 99999987654 11211 1223332 13333334443333 6899999
Q ss_pred cCCc
Q 025264 147 CIGN 150 (255)
Q Consensus 147 ~~g~ 150 (255)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
No 312
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.77 E-value=0.009 Score=48.36 Aligned_cols=78 Identities=23% Similarity=0.315 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc--E-EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT--E-FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~--~-vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
++++++|+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+.. . ..|..+ +..+...+.+... +
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4688999997 9999999999999999 9999998876654442 22322 1 123332 1223333332221 3
Q ss_pred CccEEEecCC
Q 025264 140 GVDYSFECIG 149 (255)
Q Consensus 140 ~~d~v~d~~g 149 (255)
.+|+++.+.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 313
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.77 E-value=0.0092 Score=47.78 Aligned_cols=76 Identities=22% Similarity=0.316 Sum_probs=49.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCcEE--eCCCCCCchHHHHHHhhcC--CCccE
Q 025264 73 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF--VNPKDHDKPIQQVLVDLTD--GGVDY 143 (255)
Q Consensus 73 ~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~~v--i~~~~~~~~~~~~i~~~~~--~~~d~ 143 (255)
++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+.-.. .|-.+ ++.+.+.+.+... +++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 6899997 8999999999988999 9999999877655442 2231112 23332 1233333333221 37999
Q ss_pred EEecCCc
Q 025264 144 SFECIGN 150 (255)
Q Consensus 144 v~d~~g~ 150 (255)
++++.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
No 314
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.77 E-value=0.0072 Score=48.33 Aligned_cols=78 Identities=26% Similarity=0.314 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH---hcCCcE---EeCCCCCCchHHHHHHhhcC--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK---NFGVTE---FVNPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~~i~~~~~--~~ 140 (255)
+++++||+|+ |++|.+.++.+...|+ +|+++++++...+..+ +.+.+. ..|..+ .....+.+.+... +.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 4678999997 9999999999999999 9999998754333332 234321 234332 1223333333221 36
Q ss_pred ccEEEecCC
Q 025264 141 VDYSFECIG 149 (255)
Q Consensus 141 ~d~v~d~~g 149 (255)
+|+++++.|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999887
No 315
>PLN02476 O-methyltransferase
Probab=96.77 E-value=0.014 Score=47.15 Aligned_cols=106 Identities=17% Similarity=0.181 Sum_probs=66.4
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHH----hcCCcEEeCCCCCCchHHHHHHhh
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL 136 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~i~~~ 136 (255)
+....+..+.++||-+|.+ +|..++.+++.++. .+|+.++.+++..+.++ +.|..+-+.... .+..+.+.++
T Consensus 110 L~~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l 186 (278)
T PLN02476 110 LAMLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSM 186 (278)
T ss_pred HHHHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHH
Confidence 3445566678899999874 36677777776632 27999999998777774 456532222221 3333334332
Q ss_pred c----CCCccEEE-ecCCc--HHHHHHHHHHhccCCceEEEE
Q 025264 137 T----DGGVDYSF-ECIGN--VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 137 ~----~~~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~ 171 (255)
. .+.||.|| |+--. +..++.+++.+++| |.++.=
T Consensus 187 ~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D 227 (278)
T PLN02476 187 IQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD 227 (278)
T ss_pred HhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence 1 23799998 54432 33478889999996 876643
No 316
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0094 Score=48.14 Aligned_cols=78 Identities=24% Similarity=0.379 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hh---cC--Cc-EE--eCCCCCCchHHHHHHhhcC-
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FG--VT-EF--VNPKDHDKPIQQVLVDLTD- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~---~g--~~-~v--i~~~~~~~~~~~~i~~~~~- 138 (255)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.. .+ .+ .. .+ .|-.+ +..+.+.+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4689999997 9999999999999999 999999887665433 22 21 11 12 23332 1233333333322
Q ss_pred -CCccEEEecCC
Q 025264 139 -GGVDYSFECIG 149 (255)
Q Consensus 139 -~~~d~v~d~~g 149 (255)
+++|+++.+.|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 26899999887
No 317
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.76 E-value=0.01 Score=47.31 Aligned_cols=79 Identities=18% Similarity=0.282 Sum_probs=49.7
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC---cEE-eCCCCCCchHHHHHHhhcC--CC
Q 025264 70 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---TEF-VNPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 70 ~~~~vlI~G~g---~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~---~~v-i~~~~~~~~~~~~i~~~~~--~~ 140 (255)
.+++++|+|++ ++|.+.++.+...|+ +|+.+.++++..+.++++.. ..+ .|-.+ ++...+.+.+... +.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 56899999873 899999998888999 99999887443344444321 111 23332 1223333333221 36
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++++.|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999998873
No 318
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.76 E-value=0.0078 Score=47.95 Aligned_cols=79 Identities=24% Similarity=0.337 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-h---cCCc--E-EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVT--E-FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~---~g~~--~-vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. + .+.. . ..|..+ +..+.+.+..... +
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4578999997 9999999998888999 9999999887655442 2 2322 1 223332 1223232322211 2
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|+++.+++.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 69999998873
No 319
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.76 E-value=0.0093 Score=47.04 Aligned_cols=79 Identities=19% Similarity=0.289 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE-E--eCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 139 (255)
.+.+++|+|+ |.+|..++..+...|+ +|+.+++++++.+.+ +..+... + .|..+ +..+.+.++.... +
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD-YEEVTAAIEQLKNELG 83 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999997 8999999998889999 999999987665443 2223221 1 23222 1233333333221 2
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|.++.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (239)
T PRK07666 84 SIDILINNAGI 94 (239)
T ss_pred CccEEEEcCcc
Confidence 79999998874
No 320
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.76 E-value=0.014 Score=45.96 Aligned_cols=69 Identities=26% Similarity=0.358 Sum_probs=50.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcc--hHHHHHhcCCcEEe-CCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 74 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 74 vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~--~~~~~~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
|+|+|+ |.+|...++.+...+. +|.+..|++. ..+.+++.|+..+. |+.+ .+.+.+... ++|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~-----~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVEADYDD-----PESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEES-TT------HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEeecccCC-----HHHHHHHHc-CCceEEeecC
Confidence 789998 9999999999999888 9999999864 35566788987542 2222 233333332 6999998888
No 321
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.75 E-value=0.01 Score=47.33 Aligned_cols=79 Identities=28% Similarity=0.430 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcCCc--E-EeCCCCCCchHHHHHHhhcC--CCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT--E-FVNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g~~--~-vi~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
.++++||+|+ |++|...++.+...|+ +|+.++++.++.+.+. +++.. . ..|-.+ +....+.+.+... +.+|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR-QDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 3578999997 9999999999999999 9999999887766553 33321 1 123222 1233333333221 3689
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
+++.+.|.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998763
No 322
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.75 E-value=0.016 Score=45.02 Aligned_cols=102 Identities=21% Similarity=0.240 Sum_probs=63.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCcEEeC-------CCCCCch-HHHHHHhhc-
Q 025264 68 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVN-------PKDHDKP-IQQVLVDLT- 137 (255)
Q Consensus 68 ~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi~-------~~~~~~~-~~~~i~~~~- 137 (255)
+.++.+||+.|+|. |.-++.+|. .|. +|++++.|+.-.+.+ ++.+...... ++...-+ +...+.++.
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35778999999985 888888875 799 999999999888875 3333221000 0000000 000111111
Q ss_pred --CCCccEEEecCC--------cHHHHHHHHHHhccCCceEEEEcc
Q 025264 138 --DGGVDYSFECIG--------NVSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 138 --~~~~d~v~d~~g--------~~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
.+.||.|+|+.. .+..++.+.++|+++ |+++.++.
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 126899999653 123477899999997 98766654
No 323
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.011 Score=47.82 Aligned_cols=76 Identities=24% Similarity=0.299 Sum_probs=49.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc--E--EeCCCCCCchHHHHHHhhcC--CCc
Q 025264 73 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVT--E--FVNPKDHDKPIQQVLVDLTD--GGV 141 (255)
Q Consensus 73 ~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~--~--vi~~~~~~~~~~~~i~~~~~--~~~ 141 (255)
+++|+|+ |++|..+++.+...|+ +|+++++++++.+.+ +..+.. . ..|-.+ +....+.+.+... +++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence 6899997 9999999999989999 999999887665443 223332 1 234433 1222222222211 269
Q ss_pred cEEEecCCc
Q 025264 142 DYSFECIGN 150 (255)
Q Consensus 142 d~v~d~~g~ 150 (255)
|.++++.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 324
>PRK08264 short chain dehydrogenase; Validated
Probab=96.74 E-value=0.0074 Score=47.54 Aligned_cols=77 Identities=22% Similarity=0.258 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEE-eCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
.+.+++|+|+ |.+|..+++.+...|+.+|+++++++++.+. ....+..+ .|..+ +..+.+.+... +.+|+++.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTD-PASVAAAAEAA--SDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCC-HHHHHHHHHhc--CCCCEEEEC
Confidence 4578999997 9999999999999997689989887765543 11112211 23332 12232222221 258999998
Q ss_pred CCc
Q 025264 148 IGN 150 (255)
Q Consensus 148 ~g~ 150 (255)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 876
No 325
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.74 E-value=0.0094 Score=47.52 Aligned_cols=79 Identities=19% Similarity=0.342 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcch--HHHHHhcCCcE---EeCCCCCCchHHHHHHhhcC--CCc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTE---FVNPKDHDKPIQQVLVDLTD--GGV 141 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~--~~~~~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~~~ 141 (255)
+++++||+|+ +++|.+.++.+...|+ +|+++++++.. .+.+++.+... ..|-.+ +++..+.+.+... +++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4689999997 8999999999999999 99988765422 22334444321 234333 1233333333221 369
Q ss_pred cEEEecCCc
Q 025264 142 DYSFECIGN 150 (255)
Q Consensus 142 d~v~d~~g~ 150 (255)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998873
No 326
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.74 E-value=0.043 Score=45.65 Aligned_cols=94 Identities=15% Similarity=0.073 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCChHHHHHHHH-HHHcCCCeEEEEcCCcchHHHHHh-----cCCcEEeCCCCCCchHHHHHHhhcCCCcc
Q 025264 69 EPGSIVAVFGLGTVGLAVAEG-AKAAGASRVIGIDIDPKKFDRAKN-----FGVTEFVNPKDHDKPIQQVLVDLTDGGVD 142 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l-~~~~g~~~v~~~~~~~~~~~~~~~-----~g~~~vi~~~~~~~~~~~~i~~~~~~~~d 142 (255)
+...+++|.|+|..|...+.. +...++++|.+..+++++.+.+.+ ++.... .. .++.+.++ ..|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~----~~~~~~~~-----~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VV----NSADEAIE-----EAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-Ee----CCHHHHHh-----cCC
Confidence 456789999999999876654 446688799999999888766532 343311 11 23333442 589
Q ss_pred EEEecCCcHHHHHHHHHHhccCCceEEEEccCC
Q 025264 143 YSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 143 ~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
+|+.|++... .... ..+++| -++..+|...
T Consensus 195 iVi~aT~s~~-p~i~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKT-PVFS-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred EEEEccCCCC-cchH-HhcCCC-cEEEecCCCC
Confidence 9999998766 3334 888996 8888998864
No 327
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.01 Score=47.48 Aligned_cols=79 Identities=20% Similarity=0.296 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh---cCCc--E-EeCCCCCCchHHHHHHhhcC--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVT--E-FVNPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~---~g~~--~-vi~~~~~~~~~~~~i~~~~~--~~ 140 (255)
++.+++|+|+ |++|...++.+...|+ +|+.++++++..+..++ .+.. . ..|..+ +..+.+.+.+... +.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4679999997 9999999999888999 99999987654333322 2322 1 123332 1222222222211 36
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998883
No 328
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.73 E-value=0.018 Score=47.03 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 105 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~ 105 (255)
++++++|+|+|++|.+++..+...|+++|+++.|++
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 567999999999999999988899995699999886
No 329
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.73 E-value=0.013 Score=49.69 Aligned_cols=96 Identities=16% Similarity=0.142 Sum_probs=65.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
-.+.++||.|+|-+|..++..+...|..+|++.-|+.++.+.+ +++|+.. +.. +++.+.+. .+|+||.+
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~l----~el~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VAL----EELLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ecH----HHHHHhhh-----hCCEEEEe
Confidence 4678999999999999999999999987899999988887765 7788542 222 22323332 59999999
Q ss_pred CCcHHH---HHHHHHHhccCCc-eEEEEccC
Q 025264 148 IGNVSV---MRAALECCHKGWG-TSVIVGVA 174 (255)
Q Consensus 148 ~g~~~~---~~~~~~~l~~~~G-~~v~~g~~ 174 (255)
++.+.. -....+.++.... -++.++.+
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 997662 1233344444313 34555543
No 330
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.014 Score=45.53 Aligned_cols=74 Identities=20% Similarity=0.297 Sum_probs=46.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-c-CCcEE-eCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F-GVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~-g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
.++||+|+ |.+|..++..+... . +|+++++++++.+.+.+ . +...+ .|-.+ +..+.+.+... +++|.++.+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD-PEAIAAAVEQL--GRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC-HHHHHHHHHhc--CCCCEEEEC
Confidence 57999997 99999988777766 7 99999998777655542 2 22211 23222 12222222221 269999998
Q ss_pred CCc
Q 025264 148 IGN 150 (255)
Q Consensus 148 ~g~ 150 (255)
.|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 874
No 331
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.73 E-value=0.032 Score=44.65 Aligned_cols=78 Identities=18% Similarity=0.314 Sum_probs=48.0
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCc---chHHHH-Hhc-CCc--E-EeCCCCCCchHHHHHHhhcC
Q 025264 70 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA-KNF-GVT--E-FVNPKDHDKPIQQVLVDLTD 138 (255)
Q Consensus 70 ~~~~vlI~G~---g~vG~~a~~l~~~~g~~~v~~~~~~~---~~~~~~-~~~-g~~--~-vi~~~~~~~~~~~~i~~~~~ 138 (255)
.+++++|+|+ +++|.++++.+...|+ +|+.++++. ++.+.+ .++ +.. . ..|-.+ ++...+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 4689999986 5999999988888999 999887643 233333 233 211 1 134333 1233333333322
Q ss_pred --CCccEEEecCC
Q 025264 139 --GGVDYSFECIG 149 (255)
Q Consensus 139 --~~~d~v~d~~g 149 (255)
|.+|+++++.|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 37999998876
No 332
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.72 E-value=0.014 Score=47.22 Aligned_cols=71 Identities=23% Similarity=0.207 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hhc---CCcEEeCCCCCCchHHHHHHhhcCCCccEE
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 144 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~---g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v 144 (255)
.++++++|+|+|++|.+.+..+...|+ +|+++.+++++.+.+ +++ +....+... + .....+|+|
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-------~----~~~~~~Div 182 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD-------E----LPLHRVDLI 182 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh-------h----hcccCccEE
Confidence 457899999999999999988888898 999999988776555 333 221122111 1 111258999
Q ss_pred EecCCcH
Q 025264 145 FECIGNV 151 (255)
Q Consensus 145 ~d~~g~~ 151 (255)
++|++..
T Consensus 183 Inatp~g 189 (270)
T TIGR00507 183 INATSAG 189 (270)
T ss_pred EECCCCC
Confidence 9998863
No 333
>PRK09242 tropinone reductase; Provisional
Probab=96.72 E-value=0.011 Score=47.16 Aligned_cols=79 Identities=22% Similarity=0.276 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-h---c--CCcE---EeCCCCCCchHHHHHHhhcC-
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---F--GVTE---FVNPKDHDKPIQQVLVDLTD- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~---~--g~~~---vi~~~~~~~~~~~~i~~~~~- 138 (255)
.+++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+. + . +... ..|..+ +..+.+.+.+...
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 4689999997 8999999999999999 9999999887655442 2 1 2211 123332 1223333332221
Q ss_pred -CCccEEEecCCc
Q 025264 139 -GGVDYSFECIGN 150 (255)
Q Consensus 139 -~~~d~v~d~~g~ 150 (255)
+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 379999999984
No 334
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.71 E-value=0.015 Score=45.96 Aligned_cols=106 Identities=20% Similarity=0.213 Sum_probs=66.1
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHh----cCCcEEeCCCCCCchHHHHHHhh
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL 136 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~i~~~ 136 (255)
|....+..+.++||-.|.| .|..++.+++..+ ..+|+.++.+++..+.+++ .|...-+.... .+..+.+.++
T Consensus 60 L~~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l 136 (234)
T PLN02781 60 LSMLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQL 136 (234)
T ss_pred HHHHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHH
Confidence 4455667778899999975 3666667777653 3399999999988777743 45322111111 3333333333
Q ss_pred c----CCCccEEEecCCc---HHHHHHHHHHhccCCceEEEE
Q 025264 137 T----DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 137 ~----~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 171 (255)
. .+.||+||--... ...++.+++.+++| |.++.-
T Consensus 137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 1 2379999843321 33478889999996 876653
No 335
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.71 E-value=0.01 Score=47.01 Aligned_cols=79 Identities=24% Similarity=0.295 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE-E--eCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 139 (255)
.+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ ++.+... + .|-.+ +..+.+.+.+... +
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4578999997 9999999988888999 999999986554333 2333221 1 23322 1223333332221 2
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|.++.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999988764
No 336
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=96.71 E-value=0.032 Score=44.71 Aligned_cols=98 Identities=15% Similarity=0.139 Sum_probs=67.8
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCC
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGG 140 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~ 140 (255)
+.......++++||-.|+|. |..+..+++.. +. +|++++.++.-.+.+++.+.+.+. .+.. .+. ..+.
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~~-~~~--~~~~ 89 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDVR-DWK--PKPD 89 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cChh-hCC--CCCC
Confidence 34556677889999999875 77777777765 56 999999999888888776654332 1221 111 1237
Q ss_pred ccEEEecCC------cHHHHHHHHHHhccCCceEEEE
Q 025264 141 VDYSFECIG------NVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 141 ~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
||+|+-... ....+..+.+.|+++ |+++..
T Consensus 90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 999985332 233478888999997 998765
No 337
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.026 Score=46.15 Aligned_cols=81 Identities=17% Similarity=0.181 Sum_probs=49.4
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-HHH----HHhcCCcE-E--eCCCCCCchHHHHHHhhcC
Q 025264 68 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDR----AKNFGVTE-F--VNPKDHDKPIQQVLVDLTD 138 (255)
Q Consensus 68 ~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~-~~~----~~~~g~~~-v--i~~~~~~~~~~~~i~~~~~ 138 (255)
..++.++||+|+ |++|...++.+...|+ +|+.+.+++++ .+. ++..+... + .|-.+ +..+.+.+.+...
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~ 120 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVR 120 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHH
Confidence 335689999997 9999999988888999 99998876532 222 22233221 1 23332 1223232332211
Q ss_pred --CCccEEEecCCc
Q 025264 139 --GGVDYSFECIGN 150 (255)
Q Consensus 139 --~~~d~v~d~~g~ 150 (255)
+.+|+++.+.|.
T Consensus 121 ~~~~iD~lI~~Ag~ 134 (290)
T PRK06701 121 ELGRLDILVNNAAF 134 (290)
T ss_pred HcCCCCEEEECCcc
Confidence 268999988774
No 338
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.013 Score=45.98 Aligned_cols=78 Identities=13% Similarity=0.118 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE---EeCCCCCCchHHHHHH---hhcC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLV---DLTD 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~---~~~~ 138 (255)
++++++|+|+ +++|.+.+..+...|+ +|+.+.+++++.+.+ ++.+... ..|..+ ++.+.+.+. +..+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4679999998 8999999988888999 999999988776554 2334321 123332 122322222 2222
Q ss_pred CCccEEEecCC
Q 025264 139 GGVDYSFECIG 149 (255)
Q Consensus 139 ~~~d~v~d~~g 149 (255)
+.+|+++++.|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 26999999886
No 339
>PRK01581 speE spermidine synthase; Validated
Probab=96.69 E-value=0.034 Score=46.54 Aligned_cols=102 Identities=17% Similarity=0.077 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC-c----EEeCCCCC---CchHHHHHHhhcCCC
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-T----EFVNPKDH---DKPIQQVLVDLTDGG 140 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~-~----~vi~~~~~---~~~~~~~i~~~~~~~ 140 (255)
...++|||.|+| .|.++..+++..+..+|++++.+++-.+.+++... . ..++.... -.+-.+.+.+ +.+.
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSSL 226 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCCC
Confidence 344699999976 36677788887665599999999998888875210 0 00000000 0222333333 2337
Q ss_pred ccEEE-ecCCc----------HHHHHHHHHHhccCCceEEEEcc
Q 025264 141 VDYSF-ECIGN----------VSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 141 ~d~v~-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
||+|+ |.... ..-++.+.+.|+++ |.++.-..
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 99998 54221 12367888899997 98876643
No 340
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.016 Score=45.77 Aligned_cols=75 Identities=16% Similarity=0.127 Sum_probs=48.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcC--CcE-EeCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG--VTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g--~~~-vi~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+ ... ..|-.+ .+++.+.+.+.. ...|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~-~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQLP-FIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhcc-cCCCEEEEc
Confidence 57899997 9999999988888999 9999999888777665433 221 233332 133333333321 235666655
Q ss_pred CC
Q 025264 148 IG 149 (255)
Q Consensus 148 ~g 149 (255)
.|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 54
No 341
>PRK07985 oxidoreductase; Provisional
Probab=96.68 E-value=0.03 Score=45.85 Aligned_cols=102 Identities=18% Similarity=0.167 Sum_probs=61.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCc--chHHHH----HhcCCcE---EeCCCCCCchHHHHHHhhcC-
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~--~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~~~~~- 138 (255)
+++++||+|+ |++|.+.++.+...|+ +|+++.++. ++.+.+ ++.+... ..|-.+ ++.+.+.+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 5679999997 9999999999999999 998877543 233333 2233221 123332 1223333333222
Q ss_pred -CCccEEEecCCcH-----------H---------------HHHHHHHHhccCCceEEEEccC
Q 025264 139 -GGVDYSFECIGNV-----------S---------------VMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 139 -~~~d~v~d~~g~~-----------~---------------~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
+++|+++.+.|.. . .++..++.++.+ |+++.++..
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 3689999887631 0 133444555665 899988764
No 342
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.012 Score=47.55 Aligned_cols=78 Identities=18% Similarity=0.236 Sum_probs=51.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCc-EE--eCCCCCCchHHHHHHhhcC--CCccE
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT-EF--VNPKDHDKPIQQVLVDLTD--GGVDY 143 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~-~v--i~~~~~~~~~~~~i~~~~~--~~~d~ 143 (255)
+.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+.+ .+.. .+ .|..+ +..+.+.+..... +++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 468999997 9999999998888899 99999998877666543 2211 11 23322 1233333332211 36899
Q ss_pred EEecCCc
Q 025264 144 SFECIGN 150 (255)
Q Consensus 144 v~d~~g~ 150 (255)
++.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999884
No 343
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.67 E-value=0.0048 Score=45.10 Aligned_cols=94 Identities=20% Similarity=0.234 Sum_probs=57.6
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCC----CchHHHHHHhhcCCCccEEEecCC
Q 025264 74 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 74 vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~----~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
|+|.|+|++|...+..++..|. +|..+.+++ +.+.+++.|........+. +...... ....+.+|++|-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888888999 999999887 7777776553211111000 0000000 111137999999987
Q ss_pred cHHHHHHHHH----HhccCCceEEEEcc
Q 025264 150 NVSVMRAALE----CCHKGWGTSVIVGV 173 (255)
Q Consensus 150 ~~~~~~~~~~----~l~~~~G~~v~~g~ 173 (255)
... .+.+++ .+.++ ..++.+.+
T Consensus 77 a~~-~~~~l~~l~~~~~~~-t~iv~~qN 102 (151)
T PF02558_consen 77 AYQ-LEQALQSLKPYLDPN-TTIVSLQN 102 (151)
T ss_dssp GGG-HHHHHHHHCTGEETT-EEEEEESS
T ss_pred ccc-hHHHHHHHhhccCCC-cEEEEEeC
Confidence 655 444444 45554 56776644
No 344
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.66 E-value=0.014 Score=46.23 Aligned_cols=34 Identities=35% Similarity=0.497 Sum_probs=30.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 71 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 71 ~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
+.+|+|.|+|++|..+++.+...|..+++.++.+
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3789999999999999999999999888888754
No 345
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.64 E-value=0.019 Score=45.63 Aligned_cols=35 Identities=34% Similarity=0.468 Sum_probs=30.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
.+.+|+|.|+|++|..+++.+...|..++..++.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 44799999999999999999999999888888754
No 346
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=96.64 E-value=0.032 Score=44.71 Aligned_cols=100 Identities=19% Similarity=0.244 Sum_probs=66.2
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCc-EEeCCCCCCchHHHHHHhhcCC-
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDG- 139 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~i~~~~~~- 139 (255)
+.....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++.... .++. .+.. ++...
T Consensus 23 ll~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~-----~d~~----~~~~~~ 92 (258)
T PRK01683 23 LLARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE-----ADIA----SWQPPQ 92 (258)
T ss_pred HHhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE-----Cchh----ccCCCC
Confidence 34556678889999999874 77777888776433999999999888877654221 1221 1111 11122
Q ss_pred CccEEEecCC------cHHHHHHHHHHhccCCceEEEEc
Q 025264 140 GVDYSFECIG------NVSVMRAALECCHKGWGTSVIVG 172 (255)
Q Consensus 140 ~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g 172 (255)
.+|+|+-... ....+..+.+.|+++ |+++...
T Consensus 93 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 93 ALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred CccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 7999975332 233578899999997 9987753
No 347
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.64 E-value=0.012 Score=53.88 Aligned_cols=76 Identities=25% Similarity=0.333 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcc---------------------hHHHHHhcCCcEEeCCCCC-C
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-D 126 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~---------------------~~~~~~~~g~~~vi~~~~~-~ 126 (255)
..+++|+|.|+|+.|+.++..++..|. +|+++++.+. ..+.++++|++...+..-. +
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 357899999999999999999999999 9999986543 3455567786644443210 0
Q ss_pred chHHHHHHhhcCCCccEEEecCCc
Q 025264 127 KPIQQVLVDLTDGGVDYSFECIGN 150 (255)
Q Consensus 127 ~~~~~~i~~~~~~~~d~v~d~~g~ 150 (255)
..+. .+. ..||.||.++|.
T Consensus 404 i~~~-~~~----~~~DavilAtGa 422 (654)
T PRK12769 404 ISLE-SLL----EDYDAVFVGVGT 422 (654)
T ss_pred CCHH-HHH----hcCCEEEEeCCC
Confidence 1121 111 168999998885
No 348
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.63 E-value=0.013 Score=46.41 Aligned_cols=78 Identities=19% Similarity=0.264 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-EE--eCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EF--VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~v--i~~~~~~~~~~~~i~~~~~--~ 139 (255)
++.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. +.+.. .+ .|..+ +..+.+.+..... +
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999997 9999999999999999 9999998877655442 22321 12 23322 1223333333221 2
Q ss_pred CccEEEecCC
Q 025264 140 GVDYSFECIG 149 (255)
Q Consensus 140 ~~d~v~d~~g 149 (255)
++|+++.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 349
>PRK04457 spermidine synthase; Provisional
Probab=96.62 E-value=0.046 Score=43.99 Aligned_cols=95 Identities=14% Similarity=0.153 Sum_probs=63.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc-CC----c--EEeCCCCCCchHHHHHHhhcCCCc
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GV----T--EFVNPKDHDKPIQQVLVDLTDGGV 141 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~-g~----~--~vi~~~~~~~~~~~~i~~~~~~~~ 141 (255)
.+.++||++|+|+ |..+..+++.....++++++.+++-.+.+++. +. + .++. .+..+.+.+. .+.+
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~-----~Da~~~l~~~-~~~y 137 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE-----ADGAEYIAVH-RHST 137 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE-----CCHHHHHHhC-CCCC
Confidence 3557899999875 77788888877433999999999988888763 21 1 1221 3333334332 2379
Q ss_pred cEEE-ecCCc---------HHHHHHHHHHhccCCceEEEE
Q 025264 142 DYSF-ECIGN---------VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 142 d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 171 (255)
|+|+ |+... ...++.+.+.|+++ |.++.-
T Consensus 138 D~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 138 DVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred CEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 9997 54321 24478889999997 998763
No 350
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.62 E-value=0.015 Score=46.29 Aligned_cols=79 Identities=20% Similarity=0.349 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE-E--eCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 139 (255)
.++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ +..+... . .|-.+ +..+.+.+..... +
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 4678999997 9999999998888999 999999887665443 2223221 1 23332 1223322322211 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 351
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.62 E-value=0.016 Score=46.20 Aligned_cols=79 Identities=22% Similarity=0.324 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcc--hHHHHHhcCCcE-E--eCCCCCCchHHHHHHhhcC--CCc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGV 141 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~--~~~~~~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~ 141 (255)
++.++||+|+ |++|.+.++.+...|+ +|+.+++++. ..+.+++.+... . .|-.+ .++..+.+.+... +.+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCC
Confidence 4679999997 8999999999999999 9988876432 223334444221 1 23222 1233333333221 269
Q ss_pred cEEEecCCc
Q 025264 142 DYSFECIGN 150 (255)
Q Consensus 142 d~v~d~~g~ 150 (255)
|+++++.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 352
>PRK08317 hypothetical protein; Provisional
Probab=96.62 E-value=0.031 Score=43.97 Aligned_cols=102 Identities=26% Similarity=0.373 Sum_probs=67.6
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHhc----CCc-EEeCCCCCCchHHHHHHh
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVT-EFVNPKDHDKPIQQVLVD 135 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g-~~~v~~~~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~~i~~ 135 (255)
+.+...+.++++||..|+|. |..+..+++..+ ..++++++.+++..+.+++. +.. .++.... .++ .
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~--~~~-----~ 82 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA--DGL-----P 82 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc--ccC-----C
Confidence 44667888999999999976 888888888773 23899999998888877554 111 1111110 111 1
Q ss_pred hcCCCccEEEecC------CcHHHHHHHHHHhccCCceEEEEc
Q 025264 136 LTDGGVDYSFECI------GNVSVMRAALECCHKGWGTSVIVG 172 (255)
Q Consensus 136 ~~~~~~d~v~d~~------g~~~~~~~~~~~l~~~~G~~v~~g 172 (255)
...+.||+|+-.. .....++...++|+++ |.++...
T Consensus 83 ~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 83 FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 1223789887432 1233578999999997 9988764
No 353
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.61 E-value=0.014 Score=46.98 Aligned_cols=105 Identities=19% Similarity=0.218 Sum_probs=67.9
Q ss_pred HHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC--cEEeCCCCCCchHHHHHHhhcC
Q 025264 61 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTD 138 (255)
Q Consensus 61 ~l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~i~~~~~ 138 (255)
.+....++.++.+||-.|+|. |..+..+++..++ +|++++.+++..+.+++... ..+ .... .+..+ .....
T Consensus 43 ~~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i-~~~~--~D~~~--~~~~~ 115 (263)
T PTZ00098 43 KILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKI-EFEA--NDILK--KDFPE 115 (263)
T ss_pred HHHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCce-EEEE--CCccc--CCCCC
Confidence 355677889999999999864 5566777777788 99999999888887765321 111 0000 11110 01112
Q ss_pred CCccEEEec--C------CcHHHHHHHHHHhccCCceEEEEcc
Q 025264 139 GGVDYSFEC--I------GNVSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 139 ~~~d~v~d~--~------g~~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
+.||+|+.. . .....++.+.+.|+++ |+++....
T Consensus 116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 379999852 1 1133477888999997 99987754
No 354
>PRK07574 formate dehydrogenase; Provisional
Probab=96.61 E-value=0.032 Score=47.40 Aligned_cols=89 Identities=18% Similarity=0.179 Sum_probs=56.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
.|.+|.|+|.|.+|...++.++..|. +|++.+++....+..++.|.... .++.+.+. ..|+|+-++.
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH-------VSFDSLVS-----VCDVVTIHCP 257 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec-------CCHHHHhh-----cCCEEEEcCC
Confidence 56789999999999999999999999 99999987644444444553211 22222222 3677765554
Q ss_pred c-HH---HH-HHHHHHhccCCceEEEEc
Q 025264 150 N-VS---VM-RAALECCHKGWGTSVIVG 172 (255)
Q Consensus 150 ~-~~---~~-~~~~~~l~~~~G~~v~~g 172 (255)
- +. .+ +..+..|+++ ..+|.++
T Consensus 258 lt~~T~~li~~~~l~~mk~g-a~lIN~a 284 (385)
T PRK07574 258 LHPETEHLFDADVLSRMKRG-SYLVNTA 284 (385)
T ss_pred CCHHHHHHhCHHHHhcCCCC-cEEEECC
Confidence 2 21 11 3445566664 5555554
No 355
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.60 E-value=0.02 Score=47.04 Aligned_cols=74 Identities=20% Similarity=0.290 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHH---HHHhcC-Cc---EEe--CCCCCCchHHHHHHhhcCC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD---RAKNFG-VT---EFV--NPKDHDKPIQQVLVDLTDG 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~---~~~~~g-~~---~vi--~~~~~~~~~~~~i~~~~~~ 139 (255)
.+..|+|+|| |-+|...+..+..+|+ +|.+++|++++.+ .++++. +. .++ |-.+ +..|.+.+.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d-~~sf~~ai~----- 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLD-EGSFDKAID----- 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccc-cchHHHHHh-----
Confidence 5689999998 9999999999999999 9999999988643 366654 22 122 1111 233444443
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
|+|.||.+...
T Consensus 78 gcdgVfH~Asp 88 (327)
T KOG1502|consen 78 GCDGVFHTASP 88 (327)
T ss_pred CCCEEEEeCcc
Confidence 69999986653
No 356
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.59 E-value=0.018 Score=46.58 Aligned_cols=79 Identities=20% Similarity=0.273 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc------EEeCCCCCCch---HHHHHHh
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT------EFVNPKDHDKP---IQQVLVD 135 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~------~vi~~~~~~~~---~~~~i~~ 135 (255)
.++.+||+|+ .++|.+.+..+...|+ +|+.+.+++++.+..+. .+.. .+.|..+ +++ +.+...+
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK-EVDVEKLVEFAVE 84 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC-HHHHHHHHHHHHH
Confidence 5688999987 8999999999999999 99999999887666532 2221 2233332 122 2333333
Q ss_pred hcCCCccEEEecCCc
Q 025264 136 LTDGGVDYSFECIGN 150 (255)
Q Consensus 136 ~~~~~~d~v~d~~g~ 150 (255)
...|+.|+.+++.|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 334579999998874
No 357
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.59 E-value=0.013 Score=46.80 Aligned_cols=78 Identities=21% Similarity=0.295 Sum_probs=49.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-h----cCCc--EE--eCCCCCCchHHHHHHhhcC--
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVT--EF--VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~----~g~~--~v--i~~~~~~~~~~~~i~~~~~-- 138 (255)
++++||+|+ |.+|...++.+...|+ +|+.++++..+.+.+. + .+.. .. .|..+ +......+.+...
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 468999997 8999999999999999 9999998876554432 1 2211 11 23222 1223222333211
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+++|.++++.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 378999998873
No 358
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.014 Score=47.22 Aligned_cols=79 Identities=18% Similarity=0.313 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-------HH----HHHhcCCcE---EeCCCCCCchHHHHHH
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------FD----RAKNFGVTE---FVNPKDHDKPIQQVLV 134 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~-------~~----~~~~~g~~~---vi~~~~~~~~~~~~i~ 134 (255)
++.+++|+|+ |++|...++.+...|+ +|++++++.++ .+ .++..+... ..|..+ ++.+.+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHH
Confidence 4578999997 9999999998889999 99999986542 11 122333321 134333 122333233
Q ss_pred hhcC--CCccEEEecCCc
Q 025264 135 DLTD--GGVDYSFECIGN 150 (255)
Q Consensus 135 ~~~~--~~~d~v~d~~g~ 150 (255)
+... +.+|+++++.|.
T Consensus 83 ~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 2211 269999998874
No 359
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=96.59 E-value=0.014 Score=44.68 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=60.9
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCcEEeCCCCCCchHHHHHHhhc
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT 137 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~i~~~~ 137 (255)
+.......++.+||-.|+|. |..+..+++ .|. +|++++.+++-.+.+++ .+.. +.... .++.. . ..
T Consensus 22 l~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~--~d~~~-~-~~- 91 (195)
T TIGR00477 22 VREAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA--YDINA-A-AL- 91 (195)
T ss_pred HHHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe--ccchh-c-cc-
Confidence 44445555667999999864 777777776 588 99999999877766643 2322 11100 11100 0 11
Q ss_pred CCCccEEEecC-----Cc---HHHHHHHHHHhccCCceEEEEcc
Q 025264 138 DGGVDYSFECI-----GN---VSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 138 ~~~~d~v~d~~-----g~---~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
.+.+|+|+.+. .. +..++.+.+.|+++ |.++.+..
T Consensus 92 ~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~~ 134 (195)
T TIGR00477 92 NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVAA 134 (195)
T ss_pred cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEEe
Confidence 12699997542 11 23477888899997 98655533
No 360
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.59 E-value=0.012 Score=46.78 Aligned_cols=83 Identities=19% Similarity=0.216 Sum_probs=52.6
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc--EE--eCCCC-CCchHHHHHHhh
Q 025264 67 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVT--EF--VNPKD-HDKPIQQVLVDL 136 (255)
Q Consensus 67 ~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~--~v--i~~~~-~~~~~~~~i~~~ 136 (255)
...++.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++.+.. .+ .|... ...++.+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3557889999997 9999999988888999 999999987664443 233321 11 22211 012333322222
Q ss_pred cC--CCccEEEecCCc
Q 025264 137 TD--GGVDYSFECIGN 150 (255)
Q Consensus 137 ~~--~~~d~v~d~~g~ 150 (255)
.. +.+|.++.+.+.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 22 268999988764
No 361
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.57 E-value=0.022 Score=46.45 Aligned_cols=95 Identities=28% Similarity=0.451 Sum_probs=58.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCC-cEE-eCCCCCCchHHHHHHhhcCCCc
Q 025264 68 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGV-TEF-VNPKDHDKPIQQVLVDLTDGGV 141 (255)
Q Consensus 68 ~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~-~~v-i~~~~~~~~~~~~i~~~~~~~~ 141 (255)
.+++++||=.|+|+ |.+++-.++ +|+++|++++.++...+.+++ .|. +.+ +... .+. ..+.|
T Consensus 159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~---~~~-------~~~~~ 226 (295)
T PF06325_consen 159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLS---EDL-------VEGKF 226 (295)
T ss_dssp SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCT---SCT-------CCS-E
T ss_pred ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEe---ccc-------ccccC
Confidence 67889999999753 555554444 698889999999876666543 232 122 2111 111 11479
Q ss_pred cEEEecCCcHH---HHHHHHHHhccCCceEEEEccCC
Q 025264 142 DYSFECIGNVS---VMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 142 d~v~d~~g~~~---~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
|+|+-+.-... ......+.++++ |.+++-|...
T Consensus 227 dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 227 DLVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred CEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 99996655443 244556678897 9999988864
No 362
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.56 E-value=0.017 Score=46.11 Aligned_cols=79 Identities=19% Similarity=0.362 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCC--cEE-eCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGV--TEF-VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~--~~v-i~~~~~~~~~~~~i~~~~~--~ 139 (255)
++.+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+. ..+ .|..+ +..+...+.+... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999997 9999999988888999 999999987665443 23342 211 23332 1233333333222 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|.++.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998884
No 363
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.56 E-value=0.028 Score=40.70 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=28.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
+|+|.|+|++|...++.+...|..++..++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999888888754
No 364
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.022 Score=46.37 Aligned_cols=80 Identities=26% Similarity=0.247 Sum_probs=49.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCc---------chHHHH----HhcCCcE-E--eCCCCCCchHHH
Q 025264 69 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP---------KKFDRA----KNFGVTE-F--VNPKDHDKPIQQ 131 (255)
Q Consensus 69 ~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~---------~~~~~~----~~~g~~~-v--i~~~~~~~~~~~ 131 (255)
.+++++||+|+ +++|.+.++.+...|+ +|++++++. ++.+.+ ++.+... . .|-.+ ++...+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHH
Confidence 45789999997 8999999998888999 998887654 333222 2223221 1 23322 122333
Q ss_pred HHHhhcC--CCccEEEecCCc
Q 025264 132 VLVDLTD--GGVDYSFECIGN 150 (255)
Q Consensus 132 ~i~~~~~--~~~d~v~d~~g~ 150 (255)
.+.+... +.+|+++++.|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 3333221 379999998874
No 365
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.55 E-value=0.021 Score=40.93 Aligned_cols=34 Identities=29% Similarity=0.453 Sum_probs=29.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 71 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 71 ~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
..+|+|.|+|++|..++..+...|+.+++.++..
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 4689999999999999999999999888888753
No 366
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.54 E-value=0.018 Score=45.46 Aligned_cols=79 Identities=23% Similarity=0.243 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCc-EE--eCCCCCCchHHHHHHhhcC--CCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT-EF--VNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~-~v--i~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
++.++||+|+ |.+|..+++.+...|+ .|+...++.++.+.+ .+.+.. .+ .|-.+ .+.+.+.+.+... +++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4679999997 9999999998888999 898888877666554 333321 11 23222 1223222222211 3699
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
.++.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999874
No 367
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.54 E-value=0.017 Score=48.19 Aligned_cols=35 Identities=34% Similarity=0.401 Sum_probs=31.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
...+|+|.|+|++|..+++.+...|..++..++.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34789999999999999999999999899999875
No 368
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.54 E-value=0.013 Score=45.49 Aligned_cols=101 Identities=21% Similarity=0.175 Sum_probs=62.4
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCcEEeCCCCCCchHHHHHHhhc
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT 137 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~i~~~~ 137 (255)
+....+++++++||-.|+|. |..+..+++. +. +|+.++.+++..+.++ +.+...+ +... .+..+... .
T Consensus 70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~-~~-~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~--~d~~~~~~--~ 141 (212)
T PRK00312 70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHL-VR-RVFSVERIKTLQWEAKRRLKQLGLHNV-SVRH--GDGWKGWP--A 141 (212)
T ss_pred HHHhcCCCCCCEEEEECCCc-cHHHHHHHHH-hC-EEEEEeCCHHHHHHHHHHHHHCCCCce-EEEE--CCcccCCC--c
Confidence 34667889999999999864 5555555554 34 8999999887766653 3343321 1110 11111111 1
Q ss_pred CCCccEEEecCCcHHHHHHHHHHhccCCceEEEE
Q 025264 138 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 138 ~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
.+.||+|+-........+...+.|+++ |+++..
T Consensus 142 ~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~ 174 (212)
T PRK00312 142 YAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP 174 (212)
T ss_pred CCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence 137999986555455467788899997 987654
No 369
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.54 E-value=0.049 Score=43.18 Aligned_cols=102 Identities=18% Similarity=0.152 Sum_probs=60.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCc-chH----HHHHhcCCcE-E--eCCCCCCchHHHHHHhhcC--C
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKF----DRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~-~~~----~~~~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 139 (255)
+.++||+|+ |.+|...++.+...|+ +|+...++. ++. +.+++.+... . .|..+ +..+...+.+... +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHcC
Confidence 578999997 8999999988888999 887766432 222 1223333321 1 23332 1223222332221 2
Q ss_pred CccEEEecCCc----------HH---------------HHHHHHHHhccCCceEEEEccCC
Q 025264 140 GVDYSFECIGN----------VS---------------VMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 140 ~~d~v~d~~g~----------~~---------------~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
++|.++.+.|. .. ..+.+.+.++.. |+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 68999998873 10 133445556675 8999987753
No 370
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.54 E-value=0.017 Score=46.38 Aligned_cols=78 Identities=19% Similarity=0.297 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcEE--eCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF--VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g--~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~v--i~~~~~~~~~~~~i~~~~~-- 138 (255)
.++.++|+|+ + ++|.+.++.+...|+ +|+...++++..+.+ ++.|.... .|-.+ ++...+.+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence 5688999997 4 799999988888999 999888764222222 22343222 34333 1233333333222
Q ss_pred CCccEEEecCC
Q 025264 139 GGVDYSFECIG 149 (255)
Q Consensus 139 ~~~d~v~d~~g 149 (255)
+.+|+++++.|
T Consensus 85 g~iDilVnnag 95 (260)
T PRK06603 85 GSFDFLLHGMA 95 (260)
T ss_pred CCccEEEEccc
Confidence 36999998876
No 371
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.53 E-value=0.017 Score=46.16 Aligned_cols=78 Identities=21% Similarity=0.275 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCc---EEeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVT---EFVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~---~vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
.+.++||+|+ |++|.+.++.+...|+ +|++++++ ++.+.+ .+.+.. ...|-.+ ++.+...+.+... +
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFG 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999998 9999999999999999 99999877 333332 233322 1223333 1222222332221 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|+++.+.|.
T Consensus 91 ~id~li~~ag~ 101 (258)
T PRK06935 91 KIDILVNNAGT 101 (258)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 372
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.53 E-value=0.022 Score=41.67 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCcE-EeCCCCCCchHHHHHHhhcCCCccEEEe
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE 146 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~v~d 146 (255)
.++.+++|.|+|.+|...++.+...|..+|++.++++++.+.+ ++++... .... .+..+.+ +++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDLEELL-----AEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cchhhcc-----ccCCEEEe
Confidence 4568999999999999999998888633899999988776664 4455321 0111 1121111 26999999
Q ss_pred cCCcHH
Q 025264 147 CIGNVS 152 (255)
Q Consensus 147 ~~g~~~ 152 (255)
|++...
T Consensus 88 ~~~~~~ 93 (155)
T cd01065 88 TTPVGM 93 (155)
T ss_pred CcCCCC
Confidence 987654
No 373
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.52 E-value=0.053 Score=38.38 Aligned_cols=91 Identities=16% Similarity=0.273 Sum_probs=56.0
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCCcchH---HHHHhcCCcEEeCCCCCCchHHHHH--------------
Q 025264 74 VAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKKF---DRAKNFGVTEFVNPKDHDKPIQQVL-------------- 133 (255)
Q Consensus 74 vlI~G~-g~vG~~a~~l~~~~g--~~~v~~~~~~~~~~---~~~~~~g~~~vi~~~~~~~~~~~~i-------------- 133 (255)
|.|+|+ |++|..++++.+... + +|++..-...-. +.++++.+..+.-.+ +...+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~---~~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIAD---EEAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESS---HHHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcC---HHHHHHHHHHhhhcCCCCEEE
Confidence 578898 999999999999987 5 788776543322 223667777665444 2222222
Q ss_pred ------HhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEE
Q 025264 134 ------VDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV 169 (255)
Q Consensus 134 ------~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 169 (255)
.+.... .+|+|+.+..+-..+.-.+..++.+ -++.
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~ia 118 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDIA 118 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEEE
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeEE
Confidence 222222 6888888777766678888888874 4443
No 374
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.52 E-value=0.017 Score=46.78 Aligned_cols=79 Identities=25% Similarity=0.294 Sum_probs=57.5
Q ss_pred CCCCEEEEEcC-ChHHHHHH-HHHHHcCCCeEEEEcCCcchHHHHHh-c----CC---cEEeCCCCCCchHHHHHHhhcC
Q 025264 69 EPGSIVAVFGL-GTVGLAVA-EGAKAAGASRVIGIDIDPKKFDRAKN-F----GV---TEFVNPKDHDKPIQQVLVDLTD 138 (255)
Q Consensus 69 ~~~~~vlI~G~-g~vG~~a~-~l~~~~g~~~v~~~~~~~~~~~~~~~-~----g~---~~vi~~~~~~~~~~~~i~~~~~ 138 (255)
+-|++.+|+|+ .++|.+-+ +||+ +|. +|+.+.|+++|++..++ + ++ ..++|+.+.+. ..+.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence 34689999998 79998865 5555 999 99999999999988743 2 32 23567766222 3556666666
Q ss_pred C-CccEEEecCCc
Q 025264 139 G-GVDYSFECIGN 150 (255)
Q Consensus 139 ~-~~d~v~d~~g~ 150 (255)
+ .+-+.++++|.
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 6 88888899985
No 375
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.51 E-value=0.016 Score=46.05 Aligned_cols=77 Identities=25% Similarity=0.318 Sum_probs=50.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc--EE-eCCCCCCchHHHHHHhhc--CCCc
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT--EF-VNPKDHDKPIQQVLVDLT--DGGV 141 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~--~v-i~~~~~~~~~~~~i~~~~--~~~~ 141 (255)
.++||+|+ |.+|...+..+...|. +|+++++++++.+.+.+ .+.. .+ .|..+ .+.+...+.+.. .++.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCCC
Confidence 57999997 9999999988888999 99999998877665533 2221 11 23333 122323222221 1268
Q ss_pred cEEEecCCc
Q 025264 142 DYSFECIGN 150 (255)
Q Consensus 142 d~v~d~~g~ 150 (255)
|+++.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999987763
No 376
>PLN02244 tocopherol O-methyltransferase
Probab=96.51 E-value=0.009 Score=50.01 Aligned_cols=98 Identities=21% Similarity=0.250 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCcEEeCCCCCCchHHHHHHhhcCCCccEE
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 144 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v 144 (255)
+++++||-.|+|. |..+..+++..|+ +|++++.++...+.+++ .|...-+.... .+.. .+ .+..+.||+|
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~--~D~~-~~-~~~~~~FD~V 190 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQV--ADAL-NQ-PFEDGQFDLV 190 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--cCcc-cC-CCCCCCccEE
Confidence 7889999999874 6777888888898 99999999987776643 23211000000 1110 00 1122379999
Q ss_pred EecCCc------HHHHHHHHHHhccCCceEEEEcc
Q 025264 145 FECIGN------VSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 145 ~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
+-.... ...+..+.+.|++| |+++....
T Consensus 191 ~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 191 WSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred EECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 853221 23478899999997 99988754
No 377
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.51 E-value=0.021 Score=47.74 Aligned_cols=36 Identities=31% Similarity=0.332 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 105 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~ 105 (255)
.+.+|+|.|+|++|..+++.+...|..++..++.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 346899999999999999999999998888888753
No 378
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.51 E-value=0.017 Score=49.15 Aligned_cols=35 Identities=29% Similarity=0.259 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
++.+|+|.|+|++|..++..+...|..+++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999889999876
No 379
>PRK06720 hypothetical protein; Provisional
Probab=96.48 E-value=0.026 Score=42.18 Aligned_cols=39 Identities=31% Similarity=0.282 Sum_probs=33.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHH
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 109 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~ 109 (255)
++..++|+|+ +++|...+..+...|+ +|++++++.+..+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~ 54 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQ 54 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHH
Confidence 5679999997 7999999988888999 9999998766543
No 380
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=96.48 E-value=0.056 Score=43.83 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=66.1
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc-CCcE-Ee-CCCCC--CchHHHHHHhhcCCCc
Q 025264 67 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTE-FV-NPKDH--DKPIQQVLVDLTDGGV 141 (255)
Q Consensus 67 ~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~-g~~~-vi-~~~~~--~~~~~~~i~~~~~~~~ 141 (255)
...| ++|||.|+|. |..+-.++++....++++++.+++=.+++++. +... .. |++-. ..+-.+-+++... +|
T Consensus 74 h~~p-k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~f 150 (282)
T COG0421 74 HPNP-KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KF 150 (282)
T ss_pred CCCC-CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cC
Confidence 3445 5999998764 66777888888877999999999988888763 2111 01 11110 0223334444433 79
Q ss_pred cEEE-ecCCc---------HHHHHHHHHHhccCCceEEEE
Q 025264 142 DYSF-ECIGN---------VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 142 d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 171 (255)
|+|+ |+... +.-++..-++|+++ |.++.-
T Consensus 151 DvIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 151 DVIIVDSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred CEEEEcCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 9998 65544 33378888999997 887766
No 381
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.48 E-value=0.013 Score=46.94 Aligned_cols=103 Identities=17% Similarity=0.299 Sum_probs=62.8
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCCcchHH---HH-HhcCCcEE--eCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFD---RA-KNFGVTEF--VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~g---~vG~~a~~l~~~~g~~~v~~~~~~~~~~~---~~-~~~g~~~v--i~~~~~~~~~~~~i~~~~~-- 138 (255)
+++++||+|++ ++|.+.++.+...|+ +|+.++++++..+ .+ ++++.... .|-.+ +++..+.+.+...
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE-PGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC-HHHHHHHHHHHHHHc
Confidence 46899999863 899999999989999 9999988754332 22 23342222 23222 1233333332221
Q ss_pred CCccEEEecCCcH--------------H---------------HHHHHHHHhccCCceEEEEccCC
Q 025264 139 GGVDYSFECIGNV--------------S---------------VMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 139 ~~~d~v~d~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
|.+|+++++.|.. . ..+..+..++.+ |+++.++...
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-g~Ii~iss~~ 151 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG-GSLLTMSYYG 151 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC-CEEEEEeccc
Confidence 3799999988731 0 124455666665 8888876543
No 382
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.47 E-value=0.021 Score=45.87 Aligned_cols=79 Identities=23% Similarity=0.425 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE---EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
++.+++|+|+ +++|...+..+...|+ +|+++.+++++.+.+ ++.|... ..|-.+ +....+.+.+... +
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 5678999997 8999999988888999 899999887765443 2334321 123332 1222222322211 2
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|+++.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 383
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.47 E-value=0.025 Score=43.46 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=30.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
.+.+|+|.|+|++|.-.++.+...|.+++..++..
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 44789999999999999999999999888888754
No 384
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.46 E-value=0.0091 Score=44.17 Aligned_cols=78 Identities=22% Similarity=0.274 Sum_probs=48.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--cchHHHH----HhcCCcE-Ee--CCCCCCchHHHHHHhhc--CC
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID--PKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 139 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~--~~~~~~~----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 139 (255)
++++|+|+ +++|...++.+...|..+|+.+.++ .++.+.+ +..+... ++ |..+ .+.+...+.+.. .+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 36899997 9999999988888877577888887 3433333 3344321 12 2222 123333333333 23
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|+++.+.|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 79999998885
No 385
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.051 Score=43.18 Aligned_cols=103 Identities=18% Similarity=0.154 Sum_probs=61.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CCcchHHHH----HhcCCcE-E--eCCCCCCch---HHHHHHh--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA----KNFGVTE-F--VNPKDHDKP---IQQVLVD-- 135 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~-~~~~~~~~~----~~~g~~~-v--i~~~~~~~~---~~~~i~~-- 135 (255)
.+.+++|+|+ |++|.++++.+...|+ +|++.. +++++.+.+ ++.+... . .|-.+ ... +.+.+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES-LHGVEALYSSLDNEL 80 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCC-HHHHHHHHHHHHHHh
Confidence 4679999997 8999999999999999 888765 444443322 2223221 1 12222 111 2222222
Q ss_pred --hcC-CCccEEEecCCcHH-------------------------HHHHHHHHhccCCceEEEEccCC
Q 025264 136 --LTD-GGVDYSFECIGNVS-------------------------VMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 136 --~~~-~~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
..+ +++|+++++.|... ..+.+++.+... |+++.++...
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 147 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA 147 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence 112 26999999887311 123355566675 8999987754
No 386
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.46 E-value=0.048 Score=45.43 Aligned_cols=94 Identities=19% Similarity=0.140 Sum_probs=64.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcE------EeCCCC-CCchHHHHHHhhcCCCccEE
Q 025264 72 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE------FVNPKD-HDKPIQQVLVDLTDGGVDYS 144 (255)
Q Consensus 72 ~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~------vi~~~~-~~~~~~~~i~~~~~~~~d~v 144 (255)
.+|.|+|+|.+|.+.+..+...|. +|.+.++++++.+.+++.+... .+..+- ...+..+.+ ..+|+|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V 78 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA 78 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence 369999999999999999988998 9999999888877776542110 000000 002232222 258999
Q ss_pred EecCCcHHHHHHHHHHhccCCceEEEEcc
Q 025264 145 FECIGNVSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 145 ~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
+-|+.... ++..++.++++ -.++.+..
T Consensus 79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 79 VVAVPSKA-LRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence 99999887 78888888885 66665643
No 387
>PLN03139 formate dehydrogenase; Provisional
Probab=96.46 E-value=0.034 Score=47.18 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=37.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 116 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~ 116 (255)
.|++|.|.|.|.+|...++.++..|. +|++.+++....+..++.|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 56799999999999999999999999 99999987544444445554
No 388
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.015 Score=46.47 Aligned_cols=74 Identities=23% Similarity=0.234 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcE-EeCCCCCCchHHH---HHHhhcCCCccEE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQ---VLVDLTDGGVDYS 144 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~---~i~~~~~~~~d~v 144 (255)
+++++||+|+ |++|...++.+...|+ +|+++++++++. . ...... ..|-.+ ++...+ .+.+.. +++|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~--~-~~~~~~~~~D~~~-~~~~~~~~~~~~~~~-~~id~v 81 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD--L-PEGVEFVAADLTT-AEGCAAVARAVLERL-GGVDIL 81 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh--c-CCceeEEecCCCC-HHHHHHHHHHHHHHc-CCCCEE
Confidence 4689999997 9999999999888999 999999875431 1 111111 123333 122222 222222 269999
Q ss_pred EecCC
Q 025264 145 FECIG 149 (255)
Q Consensus 145 ~d~~g 149 (255)
+++.|
T Consensus 82 i~~ag 86 (260)
T PRK06523 82 VHVLG 86 (260)
T ss_pred EECCc
Confidence 99887
No 389
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.46 E-value=0.065 Score=37.09 Aligned_cols=74 Identities=24% Similarity=0.318 Sum_probs=53.4
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHH
Q 025264 74 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 152 (255)
Q Consensus 74 vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~ 152 (255)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|...+.-.. .-.+.+++..-..++.++-+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i~gd~----~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVIYGDA----TDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEEES-T----TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccccccccc----hhhhHHhhcCccccCEEEEccCCHH
Confidence 5788999999999999999777 999999999999999998866443221 1122333332227899988877655
No 390
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.44 E-value=0.022 Score=45.68 Aligned_cols=79 Identities=22% Similarity=0.342 Sum_probs=48.5
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCcEE--eCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF--VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~---g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~~v--i~~~~~~~~~~~~i~~~~~-- 138 (255)
+++.+||+|+ +++|.+.++.+...|+ +|+...++++..+.++ +.|.... .|-.+ +++..+.+.+...
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS-DDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC-HHHHHHHHHHHHHHh
Confidence 5679999984 4899999999989999 9988866543333332 2342121 23332 2333333333222
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 379999998864
No 391
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.43 E-value=0.021 Score=45.54 Aligned_cols=79 Identities=19% Similarity=0.255 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE---EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
.+.++||+|+ +++|...++.+...|+ +++.++++.++.+.+ ++.+... ..|..+ ++...+.+.+... +
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4689999997 9999999998889999 999998877665443 2233221 134333 1223333333222 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 392
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.42 E-value=0.0095 Score=50.01 Aligned_cols=75 Identities=20% Similarity=0.215 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC----CcEE-eCCCCCCchHHHHHHhhcCC-Cc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG----VTEF-VNPKDHDKPIQQVLVDLTDG-GV 141 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g----~~~v-i~~~~~~~~~~~~i~~~~~~-~~ 141 (255)
++.+|||+|+ |.+|..+++.+...|. +|+++++++...... ..++ ...+ .|-.+ . +.+.+...+ ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~---~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD--A---AKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC--H---HHHHHHHhhcCC
Confidence 4689999997 9999999999999999 999998776543322 2221 1111 12222 2 223333333 68
Q ss_pred cEEEecCCc
Q 025264 142 DYSFECIGN 150 (255)
Q Consensus 142 d~v~d~~g~ 150 (255)
|+|+++.+.
T Consensus 77 d~vih~A~~ 85 (349)
T TIGR02622 77 EIVFHLAAQ 85 (349)
T ss_pred CEEEECCcc
Confidence 999998873
No 393
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.42 E-value=0.025 Score=44.00 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
+..+|+|.|+|++|...++.+...|..+++.++.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34689999999999999999999999789998876
No 394
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=96.42 E-value=0.022 Score=43.15 Aligned_cols=94 Identities=15% Similarity=0.160 Sum_probs=57.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCcEEeCCCCCCchHHHHHHhhcCCCccEEE
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 145 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~ 145 (255)
++++||-.|+|+ |..++.+++.....+|++++.+++..+.++ +.+.+.+ .... .+..+ +. ..+.||+|+
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~--~d~~~-~~--~~~~fD~I~ 114 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVN--GRAED-FQ--HEEQFDVIT 114 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEe--cchhh-cc--ccCCccEEE
Confidence 478999999864 666666666553338999999987665553 3454322 1111 22211 11 123799998
Q ss_pred ecC-Cc-HHHHHHHHHHhccCCceEEEE
Q 025264 146 ECI-GN-VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 146 d~~-g~-~~~~~~~~~~l~~~~G~~v~~ 171 (255)
-.. .. +..++.+.+.|+++ |+++..
T Consensus 115 s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 115 SRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred ehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 432 22 33356778889997 998866
No 395
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.42 E-value=0.027 Score=49.55 Aligned_cols=70 Identities=29% Similarity=0.294 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcc-----hHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccE
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-----KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 143 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~-----~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~ 143 (255)
-.+.+|+|+|+|.+|+.++.+++..|. +|++++.++. ..+.+++.|.....+... . . ...+|+
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~--~--------~-~~~~D~ 81 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP--T--------L-PEDTDL 81 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc--c--------c-cCCCCE
Confidence 346799999999999999999999999 9999986542 224456678765544332 1 0 115888
Q ss_pred EEecCCc
Q 025264 144 SFECIGN 150 (255)
Q Consensus 144 v~d~~g~ 150 (255)
|+-+.|.
T Consensus 82 Vv~s~Gi 88 (480)
T PRK01438 82 VVTSPGW 88 (480)
T ss_pred EEECCCc
Confidence 8888775
No 396
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=96.41 E-value=0.007 Score=46.71 Aligned_cols=101 Identities=21% Similarity=0.322 Sum_probs=63.7
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCCcchHHHHH----hcCCcEEeCCCCCCchHHHHHHhhc--
Q 025264 66 AKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT-- 137 (255)
Q Consensus 66 ~~~~~~~~vlI~G~g~vG~~a~~l~~~~--g~~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~i~~~~-- 137 (255)
.+..+..+||-+|.+ +|..++++++.+ +. +|+.++.+++..+.++ +.|...-+.... .+..+.+.++.
T Consensus 41 ~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~ 116 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELAND 116 (205)
T ss_dssp HHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHT
T ss_pred HHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhc
Confidence 344455799999975 378888888876 45 9999999998887774 345422111111 33333333332
Q ss_pred --CCCccEEE-ecCCc--HHHHHHHHHHhccCCceEEEE
Q 025264 138 --DGGVDYSF-ECIGN--VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 138 --~~~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~ 171 (255)
.+.||.|| |+--. ...++.++++++++ |.++.=
T Consensus 117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~D 154 (205)
T PF01596_consen 117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIAD 154 (205)
T ss_dssp TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEc
Confidence 23799998 65443 22377888999995 666544
No 397
>PRK12743 oxidoreductase; Provisional
Probab=96.39 E-value=0.029 Score=44.78 Aligned_cols=78 Identities=19% Similarity=0.145 Sum_probs=47.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-CcchHHHH----HhcCCcE-E--eCCCCCCchHHHHHHhhcC--C
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~-~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 139 (255)
++++||+|+ |++|..+++.+...|+ +|+.+.+ +.++.+.+ +..+... . .|-.+ +......+.+... +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 468999998 8999999999999999 8888754 33333332 3345321 2 23332 1222222222211 2
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|.++.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 398
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.38 E-value=0.022 Score=48.73 Aligned_cols=74 Identities=26% Similarity=0.326 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcC--CcEE-eCCCCCCchHHHHHHhhcCCCccEE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG--VTEF-VNPKDHDKPIQQVLVDLTDGGVDYS 144 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g--~~~v-i~~~~~~~~~~~~i~~~~~~~~d~v 144 (255)
++++++|+|+ |++|.+.++.+...|+ +|+++++++++.+.. .+.+ ...+ .|..+ . +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd--~---~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ--E---AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC--H---HHHHHHh-CCCCEE
Confidence 4689999998 9999999998888999 999999877655432 1111 1111 23332 2 2233322 269999
Q ss_pred EecCCc
Q 025264 145 FECIGN 150 (255)
Q Consensus 145 ~d~~g~ 150 (255)
+++.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 988764
No 399
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.38 E-value=0.034 Score=43.86 Aligned_cols=79 Identities=24% Similarity=0.321 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-HHH----HHhcCCcE-Ee--CCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDR----AKNFGVTE-FV--NPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~-~~~----~~~~g~~~-vi--~~~~~~~~~~~~i~~~~~-- 138 (255)
++.++||+|+ |.+|...+..+...|+ +|+++.++..+ .+. ++..+... ++ |-.+ +..+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 3568999997 9999999999999999 88777765542 222 22223221 22 3333 1223333333322
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+++|.++.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 268999998874
No 400
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.022 Score=45.91 Aligned_cols=76 Identities=18% Similarity=0.267 Sum_probs=48.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE-E--eCCCCCCchHHHHHHhhcC--CCcc
Q 025264 73 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 142 (255)
Q Consensus 73 ~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~d 142 (255)
+++|+|+ |++|...++.+...|+ +|++++++.++.+.+ +..+... + .|..+ +..+.+.+..... +++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 6899998 9999999988888999 999999887765543 2233221 1 23222 1222222222211 2699
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
+++.+.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99998884
No 401
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.37 E-value=0.043 Score=44.62 Aligned_cols=68 Identities=18% Similarity=0.290 Sum_probs=50.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHH
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 152 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~ 152 (255)
+|.|+|.|.+|...+..++..|. +|++.++++++.+.+.+.|.-.... .+. +.+ ..+|+|+.|+....
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~~-----~~~-~~~-----~~aDlVilavp~~~ 69 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEAS-----TDL-SLL-----KDCDLVILALPIGL 69 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccccc-----CCH-hHh-----cCCCEEEEcCCHHH
Confidence 58899999999999988888898 9999999998888888777421111 111 112 15899999888655
No 402
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=96.37 E-value=0.063 Score=43.00 Aligned_cols=93 Identities=24% Similarity=0.276 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCc---EEeCCCCCCchHHHHHHhhcCCCc
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLVDLTDGGV 141 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~i~~~~~~~~ 141 (255)
.++.+||-.|+|. |..+..+++. |. +|++++.+++..+.+++ .|.. .++. .+.. .+.....+.|
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~-----~d~~-~l~~~~~~~f 113 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH-----CAAQ-DIAQHLETPV 113 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE-----cCHH-HHhhhcCCCC
Confidence 4567899989874 7777777774 87 99999999988887754 3321 1221 1121 1222223379
Q ss_pred cEEEecC-----Cc-HHHHHHHHHHhccCCceEEEE
Q 025264 142 DYSFECI-----GN-VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 142 d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~ 171 (255)
|+|+... .. ...+..+.+.|+++ |+++.+
T Consensus 114 D~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 114 DLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred CEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 9998432 22 33478899999997 998765
No 403
>PRK08328 hypothetical protein; Provisional
Probab=96.36 E-value=0.019 Score=45.24 Aligned_cols=35 Identities=40% Similarity=0.473 Sum_probs=30.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
.+.+|+|.|+|++|..+++.+...|.++++.++.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 34789999999999999999999999888888743
No 404
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.35 E-value=0.023 Score=45.70 Aligned_cols=78 Identities=19% Similarity=0.296 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCcEE--eCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF--VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g--~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~v--i~~~~~~~~~~~~i~~~~~-- 138 (255)
+++++||+|+ + ++|.+.++.+...|+ +|+..+++++..+.+++ .+.... .|-.+ ++.+.+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence 4688999997 3 799999998888999 99888876321222322 221112 23333 1233333333222
Q ss_pred CCccEEEecCC
Q 025264 139 GGVDYSFECIG 149 (255)
Q Consensus 139 ~~~d~v~d~~g 149 (255)
+.+|+++++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 36999999887
No 405
>PLN00203 glutamyl-tRNA reductase
Probab=96.35 E-value=0.018 Score=50.82 Aligned_cols=73 Identities=14% Similarity=0.268 Sum_probs=52.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcC-CcE-EeCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 71 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG-VTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 71 ~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g-~~~-vi~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
+.+|+|.|+|.+|.++++.+...|+.+|+++.++.++.+.+. +++ ... +... .+..+.+. .+|+||.|
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~----~dl~~al~-----~aDVVIsA 336 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL----DEMLACAA-----EADVVFTS 336 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH----hhHHHHHh-----cCCEEEEc
Confidence 689999999999999999999999868999999988877764 343 221 1111 12222222 58999999
Q ss_pred CCcHH
Q 025264 148 IGNVS 152 (255)
Q Consensus 148 ~g~~~ 152 (255)
++.+.
T Consensus 337 T~s~~ 341 (519)
T PLN00203 337 TSSET 341 (519)
T ss_pred cCCCC
Confidence 87544
No 406
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.34 E-value=0.052 Score=44.39 Aligned_cols=67 Identities=22% Similarity=0.278 Sum_probs=48.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHH
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 152 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~ 152 (255)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+|+.|+....
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDivi~~vp~~~ 67 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA-------ETARQVTE-----QADVIFTMVPDSP 67 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc-------CCHHHHHh-----cCCEEEEecCCHH
Confidence 37788999999998888888898 99999999999888877775321 12222222 4677777776543
No 407
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.34 E-value=0.033 Score=47.58 Aligned_cols=82 Identities=21% Similarity=0.319 Sum_probs=52.3
Q ss_pred cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHH-------HHHhc-CCcEE-eCCCCCCchHHHHHHh
Q 025264 66 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-------RAKNF-GVTEF-VNPKDHDKPIQQVLVD 135 (255)
Q Consensus 66 ~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~-------~~~~~-g~~~v-i~~~~~~~~~~~~i~~ 135 (255)
.+...+.+|||+|+ |.+|..+++.+...|. +|++++++..+.+ ..... ++..+ .|..+ ++.+.+.++.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~ 132 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFS 132 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHH
Confidence 34456779999998 9999999999988999 9999998765421 11111 33332 24333 1223333332
Q ss_pred hcCCCccEEEecCCc
Q 025264 136 LTDGGVDYSFECIGN 150 (255)
Q Consensus 136 ~~~~~~d~v~d~~g~ 150 (255)
. ++++|+|++|.+.
T Consensus 133 ~-~~~~D~Vi~~aa~ 146 (390)
T PLN02657 133 E-GDPVDVVVSCLAS 146 (390)
T ss_pred h-CCCCcEEEECCcc
Confidence 2 1169999998864
No 408
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.34 E-value=0.017 Score=46.33 Aligned_cols=76 Identities=21% Similarity=0.307 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEE-eCCCCCCchHHHHHHhhcC--CCccEEE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSF 145 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~i~~~~~--~~~d~v~ 145 (255)
.++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+. .....+ .|-.+ +..+.+.+.+... +.+|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999997 9999999999999999 99999887654321 112111 23333 1233333333221 3689999
Q ss_pred ecCCc
Q 025264 146 ECIGN 150 (255)
Q Consensus 146 d~~g~ 150 (255)
++.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98873
No 409
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.025 Score=46.58 Aligned_cols=35 Identities=29% Similarity=0.272 Sum_probs=31.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 105 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~ 105 (255)
.+++++|+|+ +++|.+.++.+...|+ +|++++++.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~ 42 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRST 42 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeccc
Confidence 4689999997 8999999999999999 999998863
No 410
>PRK04266 fibrillarin; Provisional
Probab=96.33 E-value=0.096 Score=41.13 Aligned_cols=101 Identities=13% Similarity=0.209 Sum_probs=61.3
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hc-CCcEEeCCCCCCchHHHHHHhhcC
Q 025264 64 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NF-GVTEFVNPKDHDKPIQQVLVDLTD 138 (255)
Q Consensus 64 ~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~-g~~~vi~~~~~~~~~~~~i~~~~~ 138 (255)
+...++++++||=.|+|+ |..+..+++..+..+|++++.+++..+.+. +. +.. .+.-+. .+. .......
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~-~i~~D~--~~~-~~~~~l~- 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNII-PILADA--RKP-ERYAHVV- 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcE-EEECCC--CCc-chhhhcc-
Confidence 457889999999999864 556666777665338999999987666442 22 122 221111 110 0001111
Q ss_pred CCccEEEecCCcHH----HHHHHHHHhccCCceEEEE
Q 025264 139 GGVDYSFECIGNVS----VMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 139 ~~~d~v~d~~g~~~----~~~~~~~~l~~~~G~~v~~ 171 (255)
+.+|+++.-...+. .++.+.+.|+++ |+++..
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 25999995444321 257888899997 998874
No 411
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.33 E-value=0.028 Score=45.58 Aligned_cols=103 Identities=13% Similarity=0.267 Sum_probs=65.2
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCcc---hHHHH-HhcCCcEE--eCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~---g~vG~~a~~l~~~~g~~~v~~~~~~~~---~~~~~-~~~g~~~v--i~~~~~~~~~~~~i~~~~~-- 138 (255)
.++++||+|+ +++|.++++.+...|+ +|+.++++++ +.+.+ ++++.... .|-.+ .+...+.+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4689999986 4899999999999999 9999888753 22333 33443222 34333 1233333333322
Q ss_pred CCccEEEecCCcH--------------H---------------HHHHHHHHhccCCceEEEEccCC
Q 025264 139 GGVDYSFECIGNV--------------S---------------VMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 139 ~~~d~v~d~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
+.+|+++++.|.. . ..+..+..+..+ |+++.++...
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~ 146 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLG 146 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCC
Confidence 3799999988831 0 134556667775 8998887643
No 412
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.31 E-value=0.025 Score=44.86 Aligned_cols=79 Identities=18% Similarity=0.247 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCCcchHHHH----HhcCCcE-E--eCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~-~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~-- 138 (255)
++.++||+|+ |.+|...++.+...|+ +|++. .+++++.+.+ +..+... . .|-.+ +.+....+.+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD-VEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4578999997 9999999999999999 87764 5665554333 3334321 1 23332 1233333333221
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+++|+++.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 368999998873
No 413
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=96.31 E-value=0.037 Score=43.23 Aligned_cols=100 Identities=19% Similarity=0.215 Sum_probs=61.5
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCcEEe---------CCCCCCch-HHHHHH
Q 025264 66 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---------NPKDHDKP-IQQVLV 134 (255)
Q Consensus 66 ~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi---------~~~~~~~~-~~~~i~ 134 (255)
..+.++.+||+.|+|. |.-++.||. .|+ +|++++.++...+.+ ++.+..... .... -. +...+.
T Consensus 33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~--v~~~~~D~~ 107 (218)
T PRK13255 33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE--ITIYCGDFF 107 (218)
T ss_pred hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc--eEEEECccc
Confidence 3456778999999874 788888875 799 999999999888765 333321100 0000 00 000111
Q ss_pred hhc--C-CCccEEEecCC--------cHHHHHHHHHHhccCCceEEEE
Q 025264 135 DLT--D-GGVDYSFECIG--------NVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 135 ~~~--~-~~~d~v~d~~g--------~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
++. . +.||.|+|..- .+..+..+.++|+++ |++..+
T Consensus 108 ~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 108 ALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred CCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 110 1 26899998553 123478888999997 875554
No 414
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.31 E-value=0.022 Score=45.37 Aligned_cols=100 Identities=19% Similarity=0.139 Sum_probs=60.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc--CCcEE-eCCCCCCchHHHHHHhhcCCCccEEE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF--GVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 145 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~--g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~v~ 145 (255)
.+.+|||+|+ |.+|..+++.+...|. +|+++.+++++....... ++..+ .|..+ . .+.+.+....++|+||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d--~--~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE--G--SDKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC--C--HHHHHHHhhcCCCEEE
Confidence 3579999997 9999999988888899 999999887765443221 23322 23332 1 1222222212689999
Q ss_pred ecCCcHH-------------HHHHHHHHhccC-CceEEEEccC
Q 025264 146 ECIGNVS-------------VMRAALECCHKG-WGTSVIVGVA 174 (255)
Q Consensus 146 d~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 174 (255)
.+.|... ....+++.+... .++++.++..
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 8876421 123445544432 2578887654
No 415
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.31 E-value=0.02 Score=44.02 Aligned_cols=35 Identities=37% Similarity=0.541 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
+..+|+|.|+|++|...++.+...|..+++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34789999999999999999999999779999876
No 416
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.029 Score=44.37 Aligned_cols=76 Identities=22% Similarity=0.270 Sum_probs=48.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-h---cC-Cc-EE--eCCCCCCchHHHHHHhhcCCCcc
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FG-VT-EF--VNPKDHDKPIQQVLVDLTDGGVD 142 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~---~g-~~-~v--i~~~~~~~~~~~~i~~~~~~~~d 142 (255)
++++|+|+ |++|...++.+...|+ +|+++++++++.+... + .+ .. .+ .|-.+ +.+..+.+.+.. ..+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~-~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD-TASHAAFLDSLP-ALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC-hHHHHHHHHHHh-hcCC
Confidence 47999997 9999999999989999 9999999887655432 1 11 11 11 23222 122333333321 2579
Q ss_pred EEEecCCc
Q 025264 143 YSFECIGN 150 (255)
Q Consensus 143 ~v~d~~g~ 150 (255)
+++.+.|.
T Consensus 79 ~vv~~ag~ 86 (243)
T PRK07102 79 IVLIAVGT 86 (243)
T ss_pred EEEECCcC
Confidence 99987763
No 417
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.29 E-value=0.028 Score=45.47 Aligned_cols=82 Identities=20% Similarity=0.333 Sum_probs=50.3
Q ss_pred CCCCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCcc---hHHHH-HhcCCcEE--eCCCCCCchHHHHHHhhc
Q 025264 67 KVEPGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLT 137 (255)
Q Consensus 67 ~~~~~~~vlI~G~---g~vG~~a~~l~~~~g~~~v~~~~~~~~---~~~~~-~~~g~~~v--i~~~~~~~~~~~~i~~~~ 137 (255)
++..++++||+|+ +++|.+.++.+...|+ +|+.+.++++ +.+.+ ++++.... .|-.+ ++...+.+.+..
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~ 83 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLE 83 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHH
Confidence 3445789999986 5899999999999999 9988876532 23333 33453222 23322 123333333322
Q ss_pred C--CCccEEEecCCc
Q 025264 138 D--GGVDYSFECIGN 150 (255)
Q Consensus 138 ~--~~~d~v~d~~g~ 150 (255)
. +.+|+++++.|.
T Consensus 84 ~~~g~iD~lv~nAG~ 98 (272)
T PRK08159 84 KKWGKLDFVVHAIGF 98 (272)
T ss_pred HhcCCCcEEEECCcc
Confidence 2 369999998873
No 418
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.29 E-value=0.074 Score=43.57 Aligned_cols=70 Identities=19% Similarity=0.264 Sum_probs=49.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcHH
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 152 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~ 152 (255)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .++.+.+. ..|+|+.|+....
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~~~~e~~~-----~~d~vi~~vp~~~ 70 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA-------STAKAVAE-----QCDVIITMLPNSP 70 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHh-----cCCEEEEeCCCHH
Confidence 68899999999988888888898 99999999988888777665311 12222222 4677777776544
Q ss_pred HHH
Q 025264 153 VMR 155 (255)
Q Consensus 153 ~~~ 155 (255)
..+
T Consensus 71 ~~~ 73 (296)
T PRK11559 71 HVK 73 (296)
T ss_pred HHH
Confidence 333
No 419
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.26 E-value=0.034 Score=45.83 Aligned_cols=77 Identities=22% Similarity=0.254 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCc-chHHH----HHhcCCcEE---eCCCCCCchH---HHHHHhhc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDR----AKNFGVTEF---VNPKDHDKPI---QQVLVDLT 137 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~-~~~~~----~~~~g~~~v---i~~~~~~~~~---~~~i~~~~ 137 (255)
++.+++|+|+ +++|...++.+...|+ +|++.+++. ++.+. ++..|.... .|-.+ .+.. .+.+.+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~-- 86 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVG-- 86 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHH--
Confidence 4678999997 8999999998888999 999887643 22222 233343221 12222 1122 222222
Q ss_pred CCCccEEEecCCc
Q 025264 138 DGGVDYSFECIGN 150 (255)
Q Consensus 138 ~~~~d~v~d~~g~ 150 (255)
-+.+|+++++.|.
T Consensus 87 ~g~iD~li~nAG~ 99 (306)
T PRK07792 87 LGGLDIVVNNAGI 99 (306)
T ss_pred hCCCCEEEECCCC
Confidence 2479999998874
No 420
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.25 E-value=0.18 Score=40.21 Aligned_cols=99 Identities=16% Similarity=0.259 Sum_probs=62.9
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC-cEEeCCCCCCchHHHHHHhhcCCCcc
Q 025264 64 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVD 142 (255)
Q Consensus 64 ~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~i~~~~~~~~d 142 (255)
......++.+||-.|+|. |..+..+++ .|. +|++++.+++..+.+++... ..++.. +.. .+ ...++.||
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~-----d~~-~~-~~~~~~fD 105 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAG-----DIE-SL-PLATATFD 105 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEc-----Ccc-cC-cCCCCcEE
Confidence 334445678999999875 655555544 687 99999999998888876542 122211 110 01 11122699
Q ss_pred EEEecCC------cHHHHHHHHHHhccCCceEEEEcc
Q 025264 143 YSFECIG------NVSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 143 ~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
+|+.... ....+..+.+.++++ |.++....
T Consensus 106 ~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~ 141 (251)
T PRK10258 106 LAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL 141 (251)
T ss_pred EEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence 9986432 233478888999997 99887644
No 421
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=96.25 E-value=0.1 Score=39.57 Aligned_cols=99 Identities=21% Similarity=0.278 Sum_probs=63.1
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCcE--EeCCCCCCchHHHHHHh
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVD 135 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~i~~ 135 (255)
+.....+.++.+||-.|+|. |..++.+++.....+|++++.+++..+.+++ .+... ++.. +....+
T Consensus 23 ~~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~-----d~~~~~-- 94 (187)
T PRK08287 23 ALSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG-----EAPIEL-- 94 (187)
T ss_pred HHHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec-----Cchhhc--
Confidence 34556778899999999864 6677777776532399999999887777643 33322 2221 111111
Q ss_pred hcCCCccEEEecCCc---HHHHHHHHHHhccCCceEEEE
Q 025264 136 LTDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 136 ~~~~~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 171 (255)
.+.+|+|+..... ...++.+.+.|+++ |+++..
T Consensus 95 --~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 95 --PGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred --CcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 1369999853321 23467888999997 998764
No 422
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=96.24 E-value=0.19 Score=40.97 Aligned_cols=60 Identities=22% Similarity=0.331 Sum_probs=46.7
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc---CCcchHHHHHhcCCcEEeCCC
Q 025264 63 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID---IDPKKFDRAKNFGVTEFVNPK 123 (255)
Q Consensus 63 ~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~---~~~~~~~~~~~~g~~~vi~~~ 123 (255)
.....++||.+|+---+|.+|.+++.+++.+|+ +++.+. .|+++++.++.+|+..+..+.
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 356779999965543459999999999999999 776664 467889999999998665444
No 423
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.24 E-value=0.02 Score=45.26 Aligned_cols=79 Identities=18% Similarity=0.205 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-Ccch-HHHH---HhcCCcEE---eCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKK-FDRA---KNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~-~~~~-~~~~---~~~g~~~v---i~~~~~~~~~~~~i~~~~~-- 138 (255)
+++.++|+|+ |++|...++.+...|+ +|++..+ ++.+ .+.+ ++.+.... .|..+ .+++.+.+.+...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 3578999997 9999999999999999 8877543 2222 2222 23343322 23332 1223222322211
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+++|+++++.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 379999999885
No 424
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=96.22 E-value=0.068 Score=39.39 Aligned_cols=84 Identities=18% Similarity=0.149 Sum_probs=56.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC------cEEeCCCC-CCchHHHHHHhhcCCCccEEE
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV------TEFVNPKD-HDKPIQQVLVDLTDGGVDYSF 145 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~------~~vi~~~~-~~~~~~~~i~~~~~~~~d~v~ 145 (255)
+|.|+|+|..|.+++..+...|. +|....++++..+.+++-+. ...+...- ...++.+.++ +.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~-----~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE-----DADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT-----T-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC-----cccEEE
Confidence 58899999999999999999998 99999999888887754321 00010000 0134544443 589999
Q ss_pred ecCCcHHHHHHHHHHhcc
Q 025264 146 ECIGNVSVMRAALECCHK 163 (255)
Q Consensus 146 d~~g~~~~~~~~~~~l~~ 163 (255)
-++.... .+..++.+++
T Consensus 75 iavPs~~-~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPSQA-HREVLEQLAP 91 (157)
T ss_dssp E-S-GGG-HHHHHHHHTT
T ss_pred ecccHHH-HHHHHHHHhh
Confidence 8888766 6666666665
No 425
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=96.22 E-value=0.11 Score=40.09 Aligned_cols=98 Identities=22% Similarity=0.265 Sum_probs=63.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh----cCCcEEeCCCCCCchHHHHHHhhc-CCCccEE
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT-DGGVDYS 144 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~i~~~~-~~~~d~v 144 (255)
++.+||-.|+|. |..+..+++.....+|++++.+++..+.+++ .+.+.+ .... .+..+.+.... .+.+|.|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v-~~~~--~d~~~~l~~~~~~~~~D~V 115 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNL-RLLC--GDAVEVLLDMFPDGSLDRI 115 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCE-EEEe--cCHHHHHHHHcCccccceE
Confidence 668899999875 7777788876643389999999988887743 233222 1111 22323333222 2378998
Q ss_pred EecCC--------------cHHHHHHHHHHhccCCceEEEEc
Q 025264 145 FECIG--------------NVSVMRAALECCHKGWGTSVIVG 172 (255)
Q Consensus 145 ~d~~g--------------~~~~~~~~~~~l~~~~G~~v~~g 172 (255)
+-... .+..++.+.+.|+++ |.++...
T Consensus 116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 75322 234478889999997 9988763
No 426
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.21 E-value=0.041 Score=45.57 Aligned_cols=39 Identities=21% Similarity=0.141 Sum_probs=32.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHH
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 109 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~ 109 (255)
.+.+|||+|+ |.+|..+++.+...|. +|+++.++.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchH
Confidence 4679999997 9999999998888999 9998888766543
No 427
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.036 Score=44.78 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE-E--eCCCCCCchHHHHHHhhc--CC
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 139 (255)
+..+++|+|+ |.+|..+++.+...|+ +|++++++.++.+.+ +..+... + .|..+ ...+.+.+.+.. -+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 3468999997 9999999998888999 999998876654433 2234321 1 23332 122333333221 13
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|+++.+.|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 68999998874
No 428
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=96.20 E-value=0.026 Score=44.35 Aligned_cols=103 Identities=22% Similarity=0.315 Sum_probs=65.0
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHh----cCCcE--EeCCCCCCchHHHHHH
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLV 134 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~i~ 134 (255)
+.....++++++||-.|+|. |..+..+++..+. .+|++++.+++..+.+++ .+.+. ++.. +.. .+
T Consensus 37 ~l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~-----d~~-~~- 108 (231)
T TIGR02752 37 TMKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG-----NAM-EL- 108 (231)
T ss_pred HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe-----chh-cC-
Confidence 44556788999999999874 6677788877642 289999999887776643 22221 1211 111 01
Q ss_pred hhcCCCccEEEecCC------cHHHHHHHHHHhccCCceEEEEcc
Q 025264 135 DLTDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 135 ~~~~~~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
....+.+|+|+-+.. ....++.+.+.|+++ |+++....
T Consensus 109 ~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 109 PFDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred CCCCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 111237999974321 123367788999997 99987644
No 429
>PRK09135 pteridine reductase; Provisional
Probab=96.20 E-value=0.04 Score=43.57 Aligned_cols=78 Identities=17% Similarity=0.160 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcc-hHHHH----HhcC---CcE-EeCCCCCCchHHHHHHhhc--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRA----KNFG---VTE-FVNPKDHDKPIQQVLVDLT-- 137 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~-~~~~~----~~~g---~~~-vi~~~~~~~~~~~~i~~~~-- 137 (255)
.+.++||+|+ |.+|..+++.+...|+ +|++++++.+ +.+.+ .+.+ ... ..|..+ .+.+...+.+..
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4578999998 9999999988888999 9999997643 33322 2221 111 224333 122222233221
Q ss_pred CCCccEEEecCC
Q 025264 138 DGGVDYSFECIG 149 (255)
Q Consensus 138 ~~~~d~v~d~~g 149 (255)
-+++|+++.+.|
T Consensus 83 ~~~~d~vi~~ag 94 (249)
T PRK09135 83 FGRLDALVNNAS 94 (249)
T ss_pred cCCCCEEEECCC
Confidence 126899999988
No 430
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.18 E-value=0.025 Score=45.90 Aligned_cols=84 Identities=27% Similarity=0.308 Sum_probs=56.3
Q ss_pred cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-hcCCcEEe---CCCCCC---chHHHHHHhhc
Q 025264 66 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFV---NPKDHD---KPIQQVLVDLT 137 (255)
Q Consensus 66 ~~~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi---~~~~~~---~~~~~~i~~~~ 137 (255)
.+.+|...++|+|+ .++|++.+.-++..|+ +|..+.++.++...++ .++....+ .+...+ .+-++.+.+-+
T Consensus 28 ~~~k~~~hi~itggS~glgl~la~e~~~~ga-~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l 106 (331)
T KOG1210|consen 28 VKPKPRRHILITGGSSGLGLALALECKREGA-DVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL 106 (331)
T ss_pred cccCccceEEEecCcchhhHHHHHHHHHccC-ceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh
Confidence 34566689999986 8999999999999999 9999999999988874 45422111 111100 11122222222
Q ss_pred ---CCCccEEEecCCc
Q 025264 138 ---DGGVDYSFECIGN 150 (255)
Q Consensus 138 ---~~~~d~v~d~~g~ 150 (255)
.+.+|.+|.|.|.
T Consensus 107 ~~~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 107 RDLEGPIDNLFCCAGV 122 (331)
T ss_pred hhccCCcceEEEecCc
Confidence 2379999999995
No 431
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.18 E-value=0.038 Score=48.14 Aligned_cols=70 Identities=29% Similarity=0.347 Sum_probs=48.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCc-chH----HHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEE
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKF----DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 144 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~-~~~----~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v 144 (255)
.+++|+|+|+|.+|+.+++.+...|+ +|++++.+. +.. +.+.+.|...+.... .+ .. .+++|+|
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~---~~---~~----~~~~d~v 72 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIELVLGEY---PE---EF----LEGVDLV 72 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCEEEeCCc---ch---hH----hhcCCEE
Confidence 46899999998899999999999999 999999864 222 334455655333222 11 11 1268999
Q ss_pred EecCCc
Q 025264 145 FECIGN 150 (255)
Q Consensus 145 ~d~~g~ 150 (255)
+.++|.
T Consensus 73 v~~~g~ 78 (450)
T PRK14106 73 VVSPGV 78 (450)
T ss_pred EECCCC
Confidence 998885
No 432
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=96.17 E-value=0.066 Score=46.34 Aligned_cols=104 Identities=15% Similarity=0.185 Sum_probs=64.5
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----hcCCc-EE--eCCCCCCchHHHHHHh
Q 025264 63 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EF--VNPKDHDKPIQQVLVD 135 (255)
Q Consensus 63 ~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~----~~g~~-~v--i~~~~~~~~~~~~i~~ 135 (255)
.....++++++||-.|+|+ |..++.+++..+..+|++++.++++.+.++ ..|.+ .+ .+... ..... .
T Consensus 231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~--~~~~~-~-- 304 (426)
T TIGR00563 231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG--RGPSQ-W-- 304 (426)
T ss_pred HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc--ccccc-c--
Confidence 3456788999999998764 555556666555239999999999877763 45654 22 22111 11100 0
Q ss_pred hcCCCccEEE-e--cCCc-------------------------HHHHHHHHHHhccCCceEEEEcc
Q 025264 136 LTDGGVDYSF-E--CIGN-------------------------VSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 136 ~~~~~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
...+.||.|+ | |+|. ...+..+++.+++| |+++..-.
T Consensus 305 ~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc 369 (426)
T TIGR00563 305 AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC 369 (426)
T ss_pred ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 0112699998 4 4442 22477888999997 99886543
No 433
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=96.17 E-value=0.023 Score=46.70 Aligned_cols=93 Identities=16% Similarity=0.183 Sum_probs=58.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCC--CchHHHHHHhhcCCCccEEEecCCc
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH--DKPIQQVLVDLTDGGVDYSFECIGN 150 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~--~~~~~~~i~~~~~~~~d~v~d~~g~ 150 (255)
+|+|+|+|.+|...+..+...|. +|+.+++++++.+.+++.|... +..+. .........+. ..+|+|+-|+..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 58999999999999988888898 9999999888877777656421 10000 00000011111 269999998886
Q ss_pred HHHHHHHHHHhc----cCCceEEEEc
Q 025264 151 VSVMRAALECCH----KGWGTSVIVG 172 (255)
Q Consensus 151 ~~~~~~~~~~l~----~~~G~~v~~g 172 (255)
.. .+.++..++ ++ ..++.+.
T Consensus 77 ~~-~~~~~~~l~~~l~~~-~~iv~~~ 100 (304)
T PRK06522 77 YQ-LPAALPSLAPLLGPD-TPVLFLQ 100 (304)
T ss_pred cc-HHHHHHHHhhhcCCC-CEEEEec
Confidence 55 455555444 43 4555553
No 434
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.16 E-value=0.026 Score=46.49 Aligned_cols=95 Identities=16% Similarity=0.125 Sum_probs=58.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc-CCcEEeCCCCCCchHHHHHHhhc---CCCccEEEec
Q 025264 72 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHDKPIQQVLVDLT---DGGVDYSFEC 147 (255)
Q Consensus 72 ~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~~i~~~~---~~~~d~v~d~ 147 (255)
.+|+|.|+|++|......+...|. +|..+++++++.+.+++. |.. +.+..+ ...+ .+...+ .+.+|+||-|
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~-~~~~--~~~~~~~~~~~~~D~viv~ 77 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ-ASLY--AIPAETADAAEPIHRLLLA 77 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc-ceee--ccCCCCcccccccCEEEEE
Confidence 369999999999988877788898 999999987777777643 432 211111 0000 000000 1268999998
Q ss_pred CCcHHHHHHHH----HHhccCCceEEEEcc
Q 025264 148 IGNVSVMRAAL----ECCHKGWGTSVIVGV 173 (255)
Q Consensus 148 ~g~~~~~~~~~----~~l~~~~G~~v~~g~ 173 (255)
+-... ...++ ..+.++ ..++.+-+
T Consensus 78 vK~~~-~~~al~~l~~~l~~~-t~vv~lQN 105 (305)
T PRK05708 78 CKAYD-AEPAVASLAHRLAPG-AELLLLQN 105 (305)
T ss_pred CCHHh-HHHHHHHHHhhCCCC-CEEEEEeC
Confidence 87655 44444 445565 66666643
No 435
>PLN02256 arogenate dehydrogenase
Probab=96.15 E-value=0.15 Score=41.96 Aligned_cols=97 Identities=18% Similarity=0.161 Sum_probs=63.1
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCc
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGV 141 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~ 141 (255)
+.+...-.+..+|.|.|.|.+|...+..++..|. +|+++++++. .+.+++.|+.. . .+..+.+. ...
T Consensus 27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~------~~~~e~~~----~~a 93 (304)
T PLN02256 27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F------RDPDDFCE----EHP 93 (304)
T ss_pred HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e------CCHHHHhh----CCC
Confidence 3344444466789999999999999998888898 9999998763 45566677632 1 22222221 147
Q ss_pred cEEEecCCcHHHHHHHHHH-----hccCCceEEEEcc
Q 025264 142 DYSFECIGNVSVMRAALEC-----CHKGWGTSVIVGV 173 (255)
Q Consensus 142 d~v~d~~g~~~~~~~~~~~-----l~~~~G~~v~~g~ 173 (255)
|+|+-|+.... +...++- ++++ ..++.++.
T Consensus 94 DvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 94 DVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 88988887654 4444443 3454 56666655
No 436
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.14 E-value=0.032 Score=39.50 Aligned_cols=79 Identities=22% Similarity=0.373 Sum_probs=50.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc-CCcchHHHHHh-cCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecC
Q 025264 71 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 148 (255)
Q Consensus 71 ~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~-~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 148 (255)
.-+|-|+|+|.+|..+...++..|. .|..+. ++.++.+++.. ++...+.+.. +.. ..+|++|-++
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~-----------~~~-~~aDlv~iav 76 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLE-----------EIL-RDADLVFIAV 76 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TT-----------GGG-CC-SEEEE-S
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCcccccccccccccccccccc-----------ccc-ccCCEEEEEe
Confidence 3588999999999999999999999 888875 55556666644 3433333322 111 1689999999
Q ss_pred CcHHHHHHHHHHhcc
Q 025264 149 GNVSVMRAALECCHK 163 (255)
Q Consensus 149 g~~~~~~~~~~~l~~ 163 (255)
.... +...+..|..
T Consensus 77 pDda-I~~va~~La~ 90 (127)
T PF10727_consen 77 PDDA-IAEVAEQLAQ 90 (127)
T ss_dssp -CCH-HHHHHHHHHC
T ss_pred chHH-HHHHHHHHHH
Confidence 9877 7777777764
No 437
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.045 Score=44.33 Aligned_cols=100 Identities=21% Similarity=0.324 Sum_probs=60.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE---EeCCCCCCchHHHHHHhhc-CCCcc
Q 025264 71 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLT-DGGVD 142 (255)
Q Consensus 71 ~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~~~~-~~~~d 142 (255)
++.++|+|+|++|.++++.+. .|+ +|+.+++++++.+.+ +..|... ..|-.+ ++.+.+.+.+.. .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 357899999999999998875 798 999999987665443 2223221 124333 123333333321 13799
Q ss_pred EEEecCCcHH------------------HHHHHHHHhccCCceEEEEccC
Q 025264 143 YSFECIGNVS------------------VMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 143 ~v~d~~g~~~------------------~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
+++++.|... .++...+.+..+ |+++.++..
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS~ 127 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIASQ 127 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEec
Confidence 9999988421 133444555665 666666543
No 438
>PLN02823 spermine synthase
Probab=96.12 E-value=0.067 Score=44.61 Aligned_cols=99 Identities=19% Similarity=0.146 Sum_probs=60.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC--cEEeCCCCC---CchHHHHHHhhcCCCccEE
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDH---DKPIQQVLVDLTDGGVDYS 144 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~--~~vi~~~~~---~~~~~~~i~~~~~~~~d~v 144 (255)
..++|||+|+|. |..+.++++..+..+|++++.+++-.+.+++.-. ...++.... ..+-.+.+++ +.+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 346899998864 6667778887776689999999998888876421 111110000 0222233332 23379999
Q ss_pred E-ecCC----c-------HHHHH-HHHHHhccCCceEEEE
Q 025264 145 F-ECIG----N-------VSVMR-AALECCHKGWGTSVIV 171 (255)
Q Consensus 145 ~-d~~g----~-------~~~~~-~~~~~l~~~~G~~v~~ 171 (255)
| |... + ..-++ .+.+.|+++ |.++.-
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 8 6432 1 11245 677899997 987654
No 439
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.11 E-value=0.044 Score=46.16 Aligned_cols=36 Identities=31% Similarity=0.296 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 105 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~ 105 (255)
.+.+|+|.|+|++|..+++.+...|..++..++.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 347999999999999999999999998998888654
No 440
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.10 E-value=0.053 Score=48.69 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=57.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcH
Q 025264 72 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 151 (255)
Q Consensus 72 ~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~ 151 (255)
++++|.|.|.+|...++.++..|. ++++++.++++.+.+++.|...+.-... -.+.+++..-+.+|.++-++++.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~----~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA----NEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC----CHHHHHhcCccccCEEEEEcCCh
Confidence 688999999999999999999999 9999999999999999988766553322 12233333212789888776654
Q ss_pred H
Q 025264 152 S 152 (255)
Q Consensus 152 ~ 152 (255)
.
T Consensus 493 ~ 493 (558)
T PRK10669 493 Y 493 (558)
T ss_pred H
Confidence 3
No 441
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=96.10 E-value=0.061 Score=42.75 Aligned_cols=104 Identities=16% Similarity=0.294 Sum_probs=65.7
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCCcchHHHHH----hcCCcEEeCCCCCCchHHHHHHh
Q 025264 62 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVD 135 (255)
Q Consensus 62 l~~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~--g~~~v~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~i~~ 135 (255)
|....+..+-++||-.|.+ +|..++.+++.+ +. +|+.++.+++..+.++ +.|...-|.... .+..+.+.+
T Consensus 71 L~~l~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~ 146 (247)
T PLN02589 71 LNMLLKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQ 146 (247)
T ss_pred HHHHHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHH
Confidence 3344555566789999874 477778888876 45 8999999988777664 456332222222 344444444
Q ss_pred hc-----CCCccEEE-ecCCc--HHHHHHHHHHhccCCceEEE
Q 025264 136 LT-----DGGVDYSF-ECIGN--VSVMRAALECCHKGWGTSVI 170 (255)
Q Consensus 136 ~~-----~~~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~ 170 (255)
+. .+.||.|| |+--. ...++.+++++++| |.++.
T Consensus 147 l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 147 MIEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred HHhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 32 13799998 54432 22377888999996 76553
No 442
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.09 E-value=0.08 Score=42.86 Aligned_cols=94 Identities=20% Similarity=0.211 Sum_probs=65.0
Q ss_pred ccccchhhhhhHHHhhcCCC-CCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCc
Q 025264 50 LLGCGVPTGLGAVWNTAKVE-PGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 127 (255)
Q Consensus 50 ~~~~~~~ta~~~l~~~~~~~-~~~~vlI~G~g-~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 127 (255)
.+||+....+. +.+..++. .|++|+|.|.| .+|.-++.++...|+ .|.+... .. .
T Consensus 136 ~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs-------------------~t--~ 192 (285)
T PRK14191 136 FVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHI-------------------LT--K 192 (285)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeC-------------------Cc--H
Confidence 34544333332 44555654 69999999985 999999999999999 8876632 11 3
Q ss_pred hHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccC
Q 025264 128 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 128 ~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
++.+.++ .+|+++-++|.+. + -.-++++++ ..++.+|..
T Consensus 193 ~l~~~~~-----~ADIvV~AvG~p~-~-i~~~~vk~G-avVIDvGi~ 231 (285)
T PRK14191 193 DLSFYTQ-----NADIVCVGVGKPD-L-IKASMVKKG-AVVVDIGIN 231 (285)
T ss_pred HHHHHHH-----hCCEEEEecCCCC-c-CCHHHcCCC-cEEEEeecc
Confidence 3443444 4899999999887 3 224577896 899999864
No 443
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.08 E-value=0.19 Score=40.87 Aligned_cols=107 Identities=16% Similarity=0.106 Sum_probs=72.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhc---C-C-cEEeCCCCCCchHH---HHHHhhcCC
Q 025264 69 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF---G-V-TEFVNPKDHDKPIQ---QVLVDLTDG 139 (255)
Q Consensus 69 ~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~---g-~-~~vi~~~~~~~~~~---~~i~~~~~~ 139 (255)
-+++-|+|+|+ ++.|..++.-+...|. +|++.+-.++..+.++.. + . +..+|-.+ ++.+. +.+++..+.
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~-~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK-PESVKEAAQWVKKHLGE 104 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCC-HHHHHHHHHHHHHhccc
Confidence 46678999998 9999999999999999 999999888887777432 1 1 12234332 13333 344555555
Q ss_pred -CccEEEecCCcH--------------------------HHHHHHHHHhccCCceEEEEccCCCC
Q 025264 140 -GVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVAASG 177 (255)
Q Consensus 140 -~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~~~ 177 (255)
+.--+++++|-. ......+.++++..||+|.+++..+.
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 777778888721 12445566777645999999886543
No 444
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.08 E-value=0.051 Score=46.02 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
.+.+|+|.|+|++|..+++.+...|..+++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999999889888865
No 445
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.08 E-value=0.053 Score=49.23 Aligned_cols=76 Identities=18% Similarity=0.333 Sum_probs=58.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeC-CCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 71 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN-PKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 71 ~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~-~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++- ..+ ++ .+++..-+.+|.++-+++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat~--~~---~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDATR--MD---LLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeCCC--HH---HHHhcCCCcCCEEEEEeC
Confidence 3689999999999999999999999 9999999999999999888765442 222 22 233332127999998888
Q ss_pred cHH
Q 025264 150 NVS 152 (255)
Q Consensus 150 ~~~ 152 (255)
...
T Consensus 474 d~~ 476 (621)
T PRK03562 474 DPQ 476 (621)
T ss_pred CHH
Confidence 765
No 446
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.08 E-value=0.065 Score=43.55 Aligned_cols=96 Identities=8% Similarity=0.013 Sum_probs=59.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcE-EeCCCCCCchHHHHHHhhcC-CC-ccEEEecC
Q 025264 73 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD-GG-VDYSFECI 148 (255)
Q Consensus 73 ~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~i~~~~~-~~-~d~v~d~~ 148 (255)
+|||+|+ |.+|..+++.+...|. +|.+.+|++++.. ..+... ..|..+ +..+.+.++.... .+ +|.+|.+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~-~V~~~~R~~~~~~---~~~~~~~~~d~~d-~~~l~~a~~~~~~~~g~~d~v~~~~ 75 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV-PFLVASRSSSSSA---GPNEKHVKFDWLD-EDTWDNPFSSDDGMEPEISAVYLVA 75 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC-cEEEEeCCCcccc---CCCCccccccCCC-HHHHHHHHhcccCcCCceeEEEEeC
Confidence 4899998 9999999999998999 9999999877542 223332 234443 2334444432222 25 89998776
Q ss_pred CcH----HHHHHHHHHhccCC-ceEEEEcc
Q 025264 149 GNV----SVMRAALECCHKGW-GTSVIVGV 173 (255)
Q Consensus 149 g~~----~~~~~~~~~l~~~~-G~~v~~g~ 173 (255)
+.. ......++.++..+ .++|.++.
T Consensus 76 ~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 76 PPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 531 11344555555431 36777754
No 447
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.07 E-value=0.037 Score=43.98 Aligned_cols=77 Identities=18% Similarity=0.258 Sum_probs=49.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE-E--eCCCCCCchHHHHHHhhcC--CCc
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGV 141 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~ 141 (255)
++++|+|+ |++|...++.+...|+ +|+.+.+++++.+.+ +..+... . .|-.+ ++.+.+.+.+... +.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence 36899997 9999999999999999 999999876654433 2233221 1 23332 1223333333221 268
Q ss_pred cEEEecCCc
Q 025264 142 DYSFECIGN 150 (255)
Q Consensus 142 d~v~d~~g~ 150 (255)
|+++++.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998874
No 448
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=96.07 E-value=0.039 Score=40.34 Aligned_cols=97 Identities=23% Similarity=0.294 Sum_probs=63.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCC----CCchHHHHHHhhcCC-CccEE
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD----HDKPIQQVLVDLTDG-GVDYS 144 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~----~~~~~~~~i~~~~~~-~~d~v 144 (255)
..+|+|+|+ |.+|.+.++..+..++ -|..++-++... .....+++..+ .++...+++.+...| .+|.|
T Consensus 3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 358999998 9999999999999999 888888654322 12222333321 113344555555667 99999
Q ss_pred EecCCc--------HH------------------HHHHHHHHhccCCceEEEEccC
Q 025264 145 FECIGN--------VS------------------VMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 145 ~d~~g~--------~~------------------~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
|...|+ ++ +...+-..|+++ |-+.+.|..
T Consensus 77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGAk 131 (236)
T KOG4022|consen 77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGAK 131 (236)
T ss_pred EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeecccc
Confidence 986664 11 123344578896 888777653
No 449
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.07 E-value=0.093 Score=43.53 Aligned_cols=88 Identities=24% Similarity=0.336 Sum_probs=61.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEE-ecC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF-ECI 148 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~-d~~ 148 (255)
.|+++.|.|.|.+|.+.++.++..|. +|+..++++. .+..++.++.++ + +.+.++ ..|++. .|.
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~-------~-l~ell~-----~sDii~l~~P 209 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV-------D-LDELLA-----ESDIISLHCP 209 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec-------c-HHHHHH-----hCCEEEEeCC
Confidence 57899999999999999999999999 9999998876 444445555432 2 333333 366665 555
Q ss_pred CcHHH----HHHHHHHhccCCceEEEEcc
Q 025264 149 GNVSV----MRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 149 g~~~~----~~~~~~~l~~~~G~~v~~g~ 173 (255)
..+.+ -...+..|+++ +.+|-++-
T Consensus 210 lt~~T~hLin~~~l~~mk~g-a~lVNtaR 237 (324)
T COG1052 210 LTPETRHLINAEELAKMKPG-AILVNTAR 237 (324)
T ss_pred CChHHhhhcCHHHHHhCCCC-eEEEECCC
Confidence 55442 24566778885 77776654
No 450
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.07 E-value=0.079 Score=44.24 Aligned_cols=37 Identities=32% Similarity=0.512 Sum_probs=33.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcch
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 107 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~ 107 (255)
.|++|.|+|.|.+|...++.++..|. +|++.+++++.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 99999987544
No 451
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.07 E-value=0.05 Score=40.87 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 105 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~ 105 (255)
+|+|.|+|++|...++.+...|..+++.++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999997799988764
No 452
>PLN02686 cinnamoyl-CoA reductase
Probab=96.06 E-value=0.044 Score=46.44 Aligned_cols=45 Identities=18% Similarity=0.146 Sum_probs=36.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh
Q 025264 68 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 113 (255)
Q Consensus 68 ~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~ 113 (255)
...+++|||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l~~ 95 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLRE 95 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 456789999997 9999999999999999 99888877665544433
No 453
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.06 E-value=0.071 Score=40.96 Aligned_cols=34 Identities=24% Similarity=0.396 Sum_probs=30.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 71 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 71 ~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
+.+|+|.|+|++|...++.+...|.++++.++.+
T Consensus 19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3789999999999999999999999888888754
No 454
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.06 E-value=0.046 Score=45.22 Aligned_cols=78 Identities=22% Similarity=0.182 Sum_probs=50.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHH-HhcC---C--cEE-eCCCCCCchHHHHHHhhc--CC
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRA-KNFG---V--TEF-VNPKDHDKPIQQVLVDLT--DG 139 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g-~~~v~~~~~~~~~~~~~-~~~g---~--~~v-i~~~~~~~~~~~~i~~~~--~~ 139 (255)
+.+++|+|+ +++|.+.++.+...| + +|+.+++++++.+.+ ++++ . ..+ .|-.+ .....+.+.+.. .+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 568999998 899999998888899 8 999999887766544 3332 1 111 34333 122322233221 23
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|+++++.|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 69999988773
No 455
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.04 E-value=0.044 Score=43.26 Aligned_cols=78 Identities=22% Similarity=0.353 Sum_probs=48.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCCcchHHHHH----hcCCcE-E--eCCCCCCchHHHHHHhhcC--C
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~-~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 139 (255)
++++||+|+ |.+|...+..+...|+ +|+++ .+++++.+.+. ..+... + .|..+ +..+.+.+..... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 468999997 9999999988888899 89888 88776654432 222211 1 23332 1222222222211 2
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
++|+++.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 456
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.04 E-value=0.075 Score=43.18 Aligned_cols=81 Identities=16% Similarity=0.191 Sum_probs=57.8
Q ss_pred hhcCC-CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCc
Q 025264 64 NTAKV-EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGV 141 (255)
Q Consensus 64 ~~~~~-~~~~~vlI~G~g~-vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~ 141 (255)
+...+ -.|++|+|.|.|+ +|...+.++...|+ .|++..+. . .++.+.++ .+
T Consensus 151 ~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~-------------------t--~~L~~~~~-----~a 203 (283)
T PRK14192 151 KAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSR-------------------T--QNLPELVK-----QA 203 (283)
T ss_pred HHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCC-------------------c--hhHHHHhc-----cC
Confidence 34443 4788999999976 99999999999999 88877641 1 22322232 58
Q ss_pred cEEEecCCcHHHHHHHHHHhccCCceEEEEccC
Q 025264 142 DYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 142 d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
|+++.++|.+.. -..+.++++ ..++.+|..
T Consensus 204 DIvI~AtG~~~~--v~~~~lk~g-avViDvg~n 233 (283)
T PRK14192 204 DIIVGAVGKPEL--IKKDWIKQG-AVVVDAGFH 233 (283)
T ss_pred CEEEEccCCCCc--CCHHHcCCC-CEEEEEEEe
Confidence 999999987662 223568886 888888764
No 457
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.03 E-value=0.034 Score=44.53 Aligned_cols=103 Identities=20% Similarity=0.293 Sum_probs=61.5
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCcc------hHHHHHhcCCc-EE--eCCCCCCchHHHHHHhhc
Q 025264 70 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK------KFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLT 137 (255)
Q Consensus 70 ~~~~vlI~G~---g~vG~~a~~l~~~~g~~~v~~~~~~~~------~~~~~~~~g~~-~v--i~~~~~~~~~~~~i~~~~ 137 (255)
++++++|+|+ +++|.+.++.+...|+ +|+.+.++.+ ..+.+++.+.. .. .|-.+ ++...+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence 4688999986 4899999998888999 8888754332 22223222211 11 23332 123333333322
Q ss_pred C--CCccEEEecCCcH-------H----------------------HHHHHHHHhccCCceEEEEccCC
Q 025264 138 D--GGVDYSFECIGNV-------S----------------------VMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 138 ~--~~~d~v~d~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
. +.+|+++++.|.. . ..+..++.++.+ |+++.++...
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~ 150 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLG 150 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEeccc
Confidence 2 3799999988731 1 124456667775 8998887643
No 458
>PLN00016 RNA-binding protein; Provisional
Probab=96.02 E-value=0.1 Score=44.36 Aligned_cols=95 Identities=14% Similarity=0.130 Sum_probs=60.4
Q ss_pred CCEEEEE----cC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-----------HhcCCcEEeCCCCCCchHHHHHH
Q 025264 71 GSIVAVF----GL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-----------KNFGVTEFVNPKDHDKPIQQVLV 134 (255)
Q Consensus 71 ~~~vlI~----G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-----------~~~g~~~vi~~~~~~~~~~~~i~ 134 (255)
..+|||+ |+ |-+|..+++.+...|. +|+++++++.+.+.+ ...|...+. .++.+ +.
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~------~D~~d-~~ 123 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW------GDPAD-VK 123 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE------ecHHH-HH
Confidence 3689999 98 9999999998888998 999999887643221 223444332 22222 22
Q ss_pred hhcCC-CccEEEecCCcHH-HHHHHHHHhccCC-ceEEEEcc
Q 025264 135 DLTDG-GVDYSFECIGNVS-VMRAALECCHKGW-GTSVIVGV 173 (255)
Q Consensus 135 ~~~~~-~~d~v~d~~g~~~-~~~~~~~~l~~~~-G~~v~~g~ 173 (255)
+.... ++|+|+++.+... ....+++.++..+ .+++.++.
T Consensus 124 ~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 124 SKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred hhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 22223 7999999877432 2445566665431 37887764
No 459
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.02 E-value=0.052 Score=42.34 Aligned_cols=93 Identities=11% Similarity=0.070 Sum_probs=58.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcc-hHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 148 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 148 (255)
++.+|||.|+|.++.-=++.+...|+ +|++++..-. ....+.+.|.-.++. ++ +.+. ++ .++++||-|+
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~----~~~~--dl--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GN----YDKE--FI--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CC----CChH--Hh--CCCcEEEECC
Confidence 46799999999999888888888999 9988875331 222222333222221 11 1111 11 2699999999
Q ss_pred CcHHHHHHHHHHhccCCceEEEEcc
Q 025264 149 GNVSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 149 g~~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
+.+..-+.+....+.. +.++....
T Consensus 94 dD~~vN~~I~~~a~~~-~~lvn~vd 117 (223)
T PRK05562 94 DDEKLNNKIRKHCDRL-YKLYIDCS 117 (223)
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEcC
Confidence 9988445566666664 66665543
No 460
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.17 Score=38.61 Aligned_cols=63 Identities=25% Similarity=0.331 Sum_probs=40.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCc
Q 025264 73 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 150 (255)
Q Consensus 73 ~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 150 (255)
+++|+|+ |++|...+..+... . +|+.+++++.. ...|-.+ ++.+.+.+.+. +++|+++.+.|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~~----------~~~D~~~-~~~~~~~~~~~--~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSGD----------VQVDITD-PASIRALFEKV--GKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCCc----------eEecCCC-hHHHHHHHHhc--CCCCEEEECCCC
Confidence 6899997 89999988777666 7 99999876531 1233333 12233333322 368898888873
No 461
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=96.00 E-value=0.16 Score=39.38 Aligned_cols=97 Identities=23% Similarity=0.308 Sum_probs=58.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC-CccEEE
Q 025264 68 VEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSF 145 (255)
Q Consensus 68 ~~~~~~vlI~G~g~vG~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v~ 145 (255)
++++++||=+|+|+ |..+..+++..+. .+|++++.++... .-++. ++.-+-......+.+.+.... .+|+|+
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~~----~~~v~-~i~~D~~~~~~~~~i~~~~~~~~~D~V~ 122 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMDP----IVGVD-FLQGDFRDELVLKALLERVGDSKVQVVM 122 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEecccccC----CCCcE-EEecCCCChHHHHHHHHHhCCCCCCEEe
Confidence 58899999999875 6666667776653 2899999876211 11222 222111013333444443334 899999
Q ss_pred ecC-----Cc------------HHHHHHHHHHhccCCceEEEE
Q 025264 146 ECI-----GN------------VSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 146 d~~-----g~------------~~~~~~~~~~l~~~~G~~v~~ 171 (255)
... |. ...++.+.+.|++| |+++..
T Consensus 123 S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~ 164 (209)
T PRK11188 123 SDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVK 164 (209)
T ss_pred cCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 533 22 12467888899997 998875
No 462
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=96.00 E-value=0.11 Score=42.43 Aligned_cols=92 Identities=20% Similarity=0.242 Sum_probs=57.6
Q ss_pred CEEEEEcCChHHHH-HHHHHHHcCCCeEEEEcC-Ccc--hHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEec
Q 025264 72 SIVAVFGLGTVGLA-VAEGAKAAGASRVIGIDI-DPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 147 (255)
Q Consensus 72 ~~vlI~G~g~vG~~-a~~l~~~~g~~~v~~~~~-~~~--~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~ 147 (255)
-+|.|.|.|.+|.. +..+.+..+. ++.+++. +++ ..++++++|..... .++.+.+.+..-.++|+||++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~~~~dIDiVf~A 77 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMPEFDDIDIVFDA 77 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCcCCCCCCEEEEC
Confidence 47899999999987 4455554466 7776653 333 33566778864332 333333332101269999999
Q ss_pred CCcHHHHHHHHHHhccCCceEEEE
Q 025264 148 IGNVSVMRAALECCHKGWGTSVIV 171 (255)
Q Consensus 148 ~g~~~~~~~~~~~l~~~~G~~v~~ 171 (255)
++.....+....+...| -.++..
T Consensus 78 T~a~~H~e~a~~a~eaG-k~VID~ 100 (302)
T PRK08300 78 TSAGAHVRHAAKLREAG-IRAIDL 100 (302)
T ss_pred CCHHHHHHHHHHHHHcC-CeEEEC
Confidence 99888677777777774 455444
No 463
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.99 E-value=0.036 Score=50.86 Aligned_cols=79 Identities=24% Similarity=0.390 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-h----cCCcE----EeCCCCCCchHHHHHHhhc--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLT-- 137 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~-~----~g~~~----vi~~~~~~~~~~~~i~~~~-- 137 (255)
.++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. + .+... ..|-.+ +..+.+.+.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 4689999997 9999999998888999 9999999877655442 2 23211 123332 123333333322
Q ss_pred CCCccEEEecCCc
Q 025264 138 DGGVDYSFECIGN 150 (255)
Q Consensus 138 ~~~~d~v~d~~g~ 150 (255)
-+++|+++++.|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 1379999998884
No 464
>PRK05855 short chain dehydrogenase; Validated
Probab=95.98 E-value=0.035 Score=49.76 Aligned_cols=79 Identities=24% Similarity=0.307 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HhcCCcE---EeCCCCCCchHHHHHHhhcC--C
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G 139 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~ 139 (255)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+ ++.|... ..|-.+ ++...+.+.+... +
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4578999998 9999999998889999 999999988766554 2334321 123333 1223233333221 3
Q ss_pred CccEEEecCCc
Q 025264 140 GVDYSFECIGN 150 (255)
Q Consensus 140 ~~d~v~d~~g~ 150 (255)
.+|+++++.|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 69999999885
No 465
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=95.98 E-value=0.13 Score=41.64 Aligned_cols=88 Identities=22% Similarity=0.255 Sum_probs=62.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcch-HHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCcH
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 151 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~-~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~~ 151 (255)
+|-++|-|.+|.-.++-+...|. .|.+.++++++ .++++..|+... .+..+... ..|+||-|+...
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a-------~s~~eaa~-----~aDvVitmv~~~ 68 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVA-------ASPAEAAA-----EADVVITMLPDD 68 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCccc-------CCHHHHHH-----hCCEEEEecCCH
Confidence 57788999999999999999999 99999999999 888888887543 22223333 467777777766
Q ss_pred HHHHHHH-------HHhccCCceEEEEccC
Q 025264 152 SVMRAAL-------ECCHKGWGTSVIVGVA 174 (255)
Q Consensus 152 ~~~~~~~-------~~l~~~~G~~v~~g~~ 174 (255)
...+..+ ..++++ ..++.+...
T Consensus 69 ~~V~~V~~g~~g~~~~~~~G-~i~IDmSTi 97 (286)
T COG2084 69 AAVRAVLFGENGLLEGLKPG-AIVIDMSTI 97 (286)
T ss_pred HHHHHHHhCccchhhcCCCC-CEEEECCCC
Confidence 5444444 233454 566665543
No 466
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.98 E-value=0.038 Score=44.69 Aligned_cols=70 Identities=21% Similarity=0.168 Sum_probs=50.4
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh-cCCcEEeCCCCCCchHHHHHHhhcCCCccEEE
Q 025264 67 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 145 (255)
Q Consensus 67 ~~~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~ 145 (255)
...++++++|.|+|+.+.+++.-+...|+.+|.++.|++++.+.+.+ ++.+ . . +.+. ...+|+|+
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~----~---~~~~---~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W----R---PDLG---GIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c----h---hhcc---cccCCEEE
Confidence 34456789999999999999999999998679999999888777643 3311 1 0 1111 12589999
Q ss_pred ecCCc
Q 025264 146 ECIGN 150 (255)
Q Consensus 146 d~~g~ 150 (255)
+|+..
T Consensus 184 NaTp~ 188 (272)
T PRK12550 184 NVTPI 188 (272)
T ss_pred ECCcc
Confidence 98753
No 467
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.97 E-value=0.05 Score=43.29 Aligned_cols=77 Identities=22% Similarity=0.271 Sum_probs=47.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcc-hHH----HHHhcCCc-EE--eCCCCCCchHHHHHHhhcC--CC
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVT-EF--VNPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~-~~~----~~~~~g~~-~v--i~~~~~~~~~~~~i~~~~~--~~ 140 (255)
++++|+|+ |++|..+++.+...|+ +|++++++.. +.+ .++..+.. .+ .|..+ +..+.+.+..... +.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 57999998 9999999999889999 9999987543 221 12223321 11 23333 1233333333322 26
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++.+.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 9999998874
No 468
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=95.97 E-value=0.22 Score=36.64 Aligned_cols=85 Identities=22% Similarity=0.252 Sum_probs=57.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcc-hHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 148 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 148 (255)
++++|.|+|-|.-|++-++-+|-.|. +|++..+... ..+.+++-|... .++.+.++ ..|+|+-.+
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~v--------~~~~eAv~-----~aDvV~~L~ 68 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFEV--------MSVAEAVK-----KADVVMLLL 68 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-EC--------CEHHHHHH-----C-SEEEE-S
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCee--------ccHHHHHh-----hCCEEEEeC
Confidence 57899999999999999999999999 9998887766 788888888752 34555555 479998777
Q ss_pred CcHH---HH-HHHHHHhccCCceEE
Q 025264 149 GNVS---VM-RAALECCHKGWGTSV 169 (255)
Q Consensus 149 g~~~---~~-~~~~~~l~~~~G~~v 169 (255)
..+. .+ +.+...|+++ -.++
T Consensus 69 PD~~q~~vy~~~I~p~l~~G-~~L~ 92 (165)
T PF07991_consen 69 PDEVQPEVYEEEIAPNLKPG-ATLV 92 (165)
T ss_dssp -HHHHHHHHHHHHHHHS-TT--EEE
T ss_pred ChHHHHHHHHHHHHhhCCCC-CEEE
Confidence 6533 23 4555678884 4444
No 469
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=95.97 E-value=0.063 Score=43.57 Aligned_cols=74 Identities=20% Similarity=0.256 Sum_probs=44.3
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-Hhc----C---Cc-E----EeCCCCCCchHHHHHHhhcCC
Q 025264 74 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----G---VT-E----FVNPKDHDKPIQQVLVDLTDG 139 (255)
Q Consensus 74 vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~----g---~~-~----vi~~~~~~~~~~~~i~~~~~~ 139 (255)
|||+|+ |.+|...++-+...++.+++.+++++.+.-.+ +++ . .. . +-|-+ -.+.+......
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr-----d~~~l~~~~~~ 75 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR-----DKERLNRIFEE 75 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC-----HHHHHHHHTT-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc-----CHHHHHHHHhh
Confidence 799987 99999999888888887899999998776666 344 1 11 1 11222 23345555445
Q ss_pred -CccEEEecCCcHH
Q 025264 140 -GVDYSFECIGNVS 152 (255)
Q Consensus 140 -~~d~v~d~~g~~~ 152 (255)
++|+||.++.-++
T Consensus 76 ~~pdiVfHaAA~Kh 89 (293)
T PF02719_consen 76 YKPDIVFHAAALKH 89 (293)
T ss_dssp -T-SEEEE------
T ss_pred cCCCEEEEChhcCC
Confidence 8999999887544
No 470
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.96 E-value=0.12 Score=41.51 Aligned_cols=102 Identities=16% Similarity=0.203 Sum_probs=65.7
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHhcC-------CcE--EeCCCCCCchHHHHH
Q 025264 64 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFG-------VTE--FVNPKDHDKPIQQVL 133 (255)
Q Consensus 64 ~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g~-~~v~~~~~~~~~~~~~~~~g-------~~~--vi~~~~~~~~~~~~i 133 (255)
+...++++++||-.|+|+ |..+..+++..|. .+|++++.+++-.+.+++.. ... ++.... .+ +
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~--~~----l 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA--TD----L 139 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc--cc----C
Confidence 445678899999999875 6677777777652 28999999998888775321 111 111110 11 1
Q ss_pred HhhcCCCccEEEecCC------cHHHHHHHHHHhccCCceEEEEccC
Q 025264 134 VDLTDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 134 ~~~~~~~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
...++.||.|+-..+ ....+.++.+.|+++ |+++.....
T Consensus 140 -p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~ 184 (261)
T PLN02233 140 -PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFN 184 (261)
T ss_pred -CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECC
Confidence 111226999975332 233588999999997 999887654
No 471
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.94 E-value=0.076 Score=41.68 Aligned_cols=82 Identities=22% Similarity=0.321 Sum_probs=57.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHh--cCCcEEe-CCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN--FGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~--~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
+++|.|+|.+|...++.+...|. .|+++++++++.+.... .+...+. +..+ + +.+++.--..+|+++=++|
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~--~---~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIGDATD--E---DVLEEAGIDDADAVVAATG 75 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEEecCCC--H---HHHHhcCCCcCCEEEEeeC
Confidence 58899999999999999999999 99999999999877433 5554433 2222 2 3344441127999998888
Q ss_pred cHHHHHHHHHHh
Q 025264 150 NVSVMRAALECC 161 (255)
Q Consensus 150 ~~~~~~~~~~~l 161 (255)
... .+..+-.+
T Consensus 76 ~d~-~N~i~~~l 86 (225)
T COG0569 76 NDE-VNSVLALL 86 (225)
T ss_pred CCH-HHHHHHHH
Confidence 754 44444333
No 472
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.94 E-value=0.13 Score=43.43 Aligned_cols=94 Identities=15% Similarity=0.251 Sum_probs=62.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcC--CcchHH-HHHhcCCcEEeCCCCCCchHHHHH------------
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDI--DPKKFD-RAKNFGVTEFVNPKDHDKPIQQVL------------ 133 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~--g~~~v~~~~~--~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~i------------ 133 (255)
++|.|.|+ |++|..+++.++.. .+ +|++++. +.++.. .++++++..+.-..+ ...+.+
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~---~~~~~l~~~l~~~~~~v~ 77 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADE---EAAKELKEALAAAGIEVL 77 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHhhccCCceEE
Confidence 47899997 99999999988765 46 8888863 333333 346788776543332 211222
Q ss_pred ------HhhcCC-CccEEEecCCcHHHHHHHHHHhccCCceEEE
Q 025264 134 ------VDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVI 170 (255)
Q Consensus 134 ------~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 170 (255)
.++... .+|+|+.+.++...+.-.+..++.| -++.+
T Consensus 78 ~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 78 AGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred EChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 222223 5999999998876688888889885 55554
No 473
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.93 E-value=0.11 Score=45.21 Aligned_cols=87 Identities=22% Similarity=0.202 Sum_probs=54.4
Q ss_pred EEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCCcchH-HHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCCc
Q 025264 73 IVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 150 (255)
Q Consensus 73 ~vlI~G-~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 150 (255)
+|.|.| .|.+|.+.+..++..|. +|+++++++++. +.+.+.|+.. . .+..+.+. .+|+|+-|+..
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~gv~~-~------~~~~e~~~-----~aDvVIlavp~ 68 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKELGVEY-A------NDNIDAAK-----DADIVIISVPI 68 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHcCCee-c------cCHHHHhc-----cCCEEEEecCH
Confidence 588998 49999999999999998 999999887764 4556667531 1 12222221 46777777665
Q ss_pred HHH---HHHHHHHhccCCceEEEEcc
Q 025264 151 VSV---MRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 151 ~~~---~~~~~~~l~~~~G~~v~~g~ 173 (255)
... ++.....++++ ..++.++.
T Consensus 69 ~~~~~vl~~l~~~l~~~-~iViDvsS 93 (437)
T PRK08655 69 NVTEDVIKEVAPHVKEG-SLLMDVTS 93 (437)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEEccc
Confidence 431 22223334443 45555554
No 474
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.93 E-value=0.048 Score=47.49 Aligned_cols=71 Identities=23% Similarity=0.191 Sum_probs=48.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcch----HHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEE
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK----FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 145 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~----~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~ 145 (255)
.+.+++|+|+|++|++++++++..|+ +|++.+.+... .+.+++.|......... .+. +. .++|+|+
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~---~~----~~~d~vV 73 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHP--LEL---LD----EDFDLMV 73 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCC--HHH---hc----CcCCEEE
Confidence 36789999998899999999999999 99999865422 23455567654332221 221 11 1488888
Q ss_pred ecCCc
Q 025264 146 ECIGN 150 (255)
Q Consensus 146 d~~g~ 150 (255)
.+.|-
T Consensus 74 ~s~gi 78 (447)
T PRK02472 74 KNPGI 78 (447)
T ss_pred ECCCC
Confidence 87764
No 475
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.92 E-value=0.045 Score=43.45 Aligned_cols=74 Identities=30% Similarity=0.330 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC--cE-EeCCCCCCchHHHHHHhhcC--CCccE
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TE-FVNPKDHDKPIQQVLVDLTD--GGVDY 143 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~--~~-vi~~~~~~~~~~~~i~~~~~--~~~d~ 143 (255)
+++++||+|+ |.+|...++.+...|+ +|++++++. ....+. .. ..|-.+ ++.+.+.+.+... +.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4678999997 8999999998888999 999999875 222221 11 123332 1223333333221 26899
Q ss_pred EEecCCc
Q 025264 144 SFECIGN 150 (255)
Q Consensus 144 v~d~~g~ 150 (255)
++.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998874
No 476
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.91 E-value=0.037 Score=45.02 Aligned_cols=44 Identities=25% Similarity=0.256 Sum_probs=37.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 112 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~ 112 (255)
.++++++|+|+|+.+.+++.-+...|+.+++++.|+.++.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34679999999999999998888899878999999988877764
No 477
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.89 E-value=0.26 Score=34.21 Aligned_cols=88 Identities=20% Similarity=0.332 Sum_probs=60.6
Q ss_pred EEEEEcCChHHHHHHHHHHHc--CCCeEEEE-cCCcchHHHH-HhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecC
Q 025264 73 IVAVFGLGTVGLAVAEGAKAA--GASRVIGI-DIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 148 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~--g~~~v~~~-~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 148 (255)
+|.|.|.|..|.....-++.. +. +++++ ++++++.+.+ +++|.. .+ .++.+.+.+. .+|+|+.++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~------~~~~~ll~~~---~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY------TDLEELLADE---DVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE------SSHHHHHHHT---TESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch------hHHHHHHHhh---cCCEEEEec
Confidence 588999999998887666655 45 66654 5566666654 667877 44 3344444432 699999999
Q ss_pred CcHHHHHHHHHHhccCCceEEEEcc
Q 025264 149 GNVSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 149 g~~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
......+.+..++..+ .-+.+..
T Consensus 71 p~~~h~~~~~~~l~~g--~~v~~EK 93 (120)
T PF01408_consen 71 PPSSHAEIAKKALEAG--KHVLVEK 93 (120)
T ss_dssp SGGGHHHHHHHHHHTT--SEEEEES
T ss_pred CCcchHHHHHHHHHcC--CEEEEEc
Confidence 9887788888888884 4555533
No 478
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=95.88 E-value=0.061 Score=43.03 Aligned_cols=79 Identities=16% Similarity=0.149 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCc-chHHHH----HhcCCcE---EeCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~-~~~~~~----~~~g~~~---vi~~~~~~~~~~~~i~~~~~-- 138 (255)
+++++||+|+ |++|...++.+...|+ +|+.+.++. +..+.+ +..+... ..|-.+ .....+.+.+...
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5789999997 9999999999999999 888877643 222222 2234321 124333 1222222332221
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+++|+++++.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 269999998884
No 479
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.88 E-value=0.098 Score=42.37 Aligned_cols=83 Identities=22% Similarity=0.270 Sum_probs=61.2
Q ss_pred HHhhcCCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCC
Q 025264 62 VWNTAKVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG 139 (255)
Q Consensus 62 l~~~~~~~-~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~ 139 (255)
+.+..++. .|++|+|.|. +.+|.-.+.++...|+ .|++..+ +. .++.+.++
T Consensus 148 lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs-------------------~t--~~l~~~~~----- 200 (285)
T PRK14189 148 MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHS-------------------KT--RDLAAHTR----- 200 (285)
T ss_pred HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecC-------------------CC--CCHHHHhh-----
Confidence 44555543 7899999998 5669999999999999 8887432 12 44444444
Q ss_pred CccEEEecCCcHHHHHHHHHHhccCCceEEEEccC
Q 025264 140 GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 140 ~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
..|+|+-++|.+..+. -++++++ ..++.+|..
T Consensus 201 ~ADIVV~avG~~~~i~--~~~ik~g-avVIDVGin 232 (285)
T PRK14189 201 QADIVVAAVGKRNVLT--ADMVKPG-ATVIDVGMN 232 (285)
T ss_pred hCCEEEEcCCCcCccC--HHHcCCC-CEEEEcccc
Confidence 4899999999887333 3889996 899999864
No 480
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.88 E-value=0.063 Score=44.21 Aligned_cols=93 Identities=15% Similarity=0.045 Sum_probs=63.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCCcchHHHH-HhcC---CcEEeCCCCCCchHHHHHHhhcCCCccE
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAK-AAGASRVIGIDIDPKKFDRA-KNFG---VTEFVNPKDHDKPIQQVLVDLTDGGVDY 143 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~-~~g~~~v~~~~~~~~~~~~~-~~~g---~~~vi~~~~~~~~~~~~i~~~~~~~~d~ 143 (255)
....+++|.|+|..|.+.++.+. ..+..+|.+..+++++.+.+ .++. ..... .+..+.++ .+|+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~------~~~~~av~-----~aDi 191 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEP------LDGEAIPE-----AVDL 191 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEE------CCHHHHhh-----cCCE
Confidence 45678999999999998887775 46776899999998877665 3332 22111 23434443 5999
Q ss_pred EEecCCcHHHHHHHHHHhccCCceEEEEccCC
Q 025264 144 SFECIGNVSVMRAALECCHKGWGTSVIVGVAA 175 (255)
Q Consensus 144 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 175 (255)
|+.|+.++.-+-.. .++++ -++..+|...
T Consensus 192 VitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~ 220 (304)
T PRK07340 192 VVTATTSRTPVYPE--AARAG-RLVVAVGAFT 220 (304)
T ss_pred EEEccCCCCceeCc--cCCCC-CEEEecCCCC
Confidence 99988865422222 37886 7888888764
No 481
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=95.87 E-value=0.05 Score=41.12 Aligned_cols=32 Identities=25% Similarity=0.292 Sum_probs=28.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 025264 73 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 104 (255)
Q Consensus 73 ~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~ 104 (255)
++||+|+ |++|+..++.+...|.++++.+.++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~ 34 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRS 34 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccC
Confidence 6899987 9999999999999988799999988
No 482
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.86 E-value=0.12 Score=42.14 Aligned_cols=93 Identities=20% Similarity=0.208 Sum_probs=64.5
Q ss_pred ccccchhhhhhHHHhhcCC-CCCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEc-CCcchHHHHHhcCCcEEeCCCCCC
Q 025264 50 LLGCGVPTGLGAVWNTAKV-EPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKNFGVTEFVNPKDHD 126 (255)
Q Consensus 50 ~~~~~~~ta~~~l~~~~~~-~~~~~vlI~G-~g~vG~~a~~l~~~~g~~~v~~~~-~~~~~~~~~~~~g~~~vi~~~~~~ 126 (255)
.+||+....+. +.+...+ -.|++|+|+| .+.+|.-.+.++...|+ .|++.. +++
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~--------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR--------------------- 193 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence 34544333332 4455554 4789999999 49999999999999999 888874 332
Q ss_pred chHHHHHHhhcCCCccEEEecCCcHHHHHHHHHHhccCCceEEEEccC
Q 025264 127 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 127 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
++.+.++ ..|+|+-++|.+..++..+ +++| ..++.+|..
T Consensus 194 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 194 -DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred -CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 1222222 4899999999988556554 8886 888888874
No 483
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.86 E-value=0.026 Score=47.16 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=31.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcc
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 106 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~ 106 (255)
++.+|||+|+ |.+|..+++.+...|. +|++++++++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~-~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGY-EVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-EEEEEecccc
Confidence 3578999997 9999999999999999 9999987643
No 484
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.85 E-value=0.073 Score=48.19 Aligned_cols=92 Identities=10% Similarity=0.099 Sum_probs=65.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeC-CCCCCchHHHHHHhhcCCCccEEEecCCc
Q 025264 72 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN-PKDHDKPIQQVLVDLTDGGVDYSFECIGN 150 (255)
Q Consensus 72 ~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~-~~~~~~~~~~~i~~~~~~~~d~v~d~~g~ 150 (255)
++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++- ..+ + +.+++..-+.+|.++-+.+.
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat~--~---~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGDATQ--L---ELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEeeCCC--H---HHHHhcCCccCCEEEEEeCC
Confidence 589999999999999999999999 9999999999999999988765542 222 2 23333322279999988888
Q ss_pred HHHHHHHH---HHhccCCceEEE
Q 025264 151 VSVMRAAL---ECCHKGWGTSVI 170 (255)
Q Consensus 151 ~~~~~~~~---~~l~~~~G~~v~ 170 (255)
...-..+. +...++ -+++.
T Consensus 475 ~~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 475 PEDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred HHHHHHHHHHHHHHCCC-CeEEE
Confidence 66333333 334443 45443
No 485
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.83 E-value=0.074 Score=42.58 Aligned_cols=78 Identities=12% Similarity=0.225 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-CcchHHHH-Hh----cCCc-E--EeCCCCCCchHHHHHHhhcC-
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA-KN----FGVT-E--FVNPKDHDKPIQQVLVDLTD- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~-~~~~~~~~-~~----~g~~-~--vi~~~~~~~~~~~~i~~~~~- 138 (255)
+++++||+|+ +++|.+.++.+...|+ +|+.+.+ ++++.+.+ ++ .+.. . ..|-.+ ++.+.+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 5689999998 8999999998889999 8888764 34443322 21 2321 1 124333 1233333333221
Q ss_pred -CCccEEEecCC
Q 025264 139 -GGVDYSFECIG 149 (255)
Q Consensus 139 -~~~d~v~d~~g 149 (255)
+.+|+++++.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 36899998875
No 486
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=95.83 E-value=0.087 Score=43.95 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecC
Q 025264 69 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 148 (255)
Q Consensus 69 ~~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~ 148 (255)
.++.+||-.|+|. |..+..+++..+..+|++++.+++-.+.+++.....-+.... .+.. .+ ....+.||+|+.+.
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~--gD~e-~l-p~~~~sFDvVIs~~ 186 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE--GDAE-DL-PFPTDYADRYVSAG 186 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe--ccHH-hC-CCCCCceeEEEEcC
Confidence 4678999999875 777777787765349999999988777776532110011111 1111 11 11123699988532
Q ss_pred C------cHHHHHHHHHHhccCCceEEEEcc
Q 025264 149 G------NVSVMRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 149 g------~~~~~~~~~~~l~~~~G~~v~~g~ 173 (255)
. ....++.+.+.|+++ |+++..+.
T Consensus 187 ~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 187 SIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred hhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 1 233578999999997 99987754
No 487
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=95.83 E-value=0.07 Score=42.22 Aligned_cols=79 Identities=16% Similarity=0.171 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-CcchHHHH----HhcCCcE-E--eCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~-~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~-- 138 (255)
++.+++|+|+ |.+|..+++.+...|+ +|+++.+ ++++.+.+ ++.+... . .|..+ +..+.+.+.+...
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK-VEDANRLVEEAVNHF 82 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 3689999997 9999999998888999 8877654 33433332 2333221 1 23322 1233333333222
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+.+|+++.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (247)
T PRK12935 83 GKVDILVNNAGI 94 (247)
T ss_pred CCCCEEEECCCC
Confidence 268999998875
No 488
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.83 E-value=0.062 Score=42.26 Aligned_cols=77 Identities=17% Similarity=0.176 Sum_probs=46.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-CcchHHHH-Hh---cCCc--E-EeCCCCCCchHHHHHHhhc--CCC
Q 025264 72 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA-KN---FGVT--E-FVNPKDHDKPIQQVLVDLT--DGG 140 (255)
Q Consensus 72 ~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~-~~~~~~~~-~~---~g~~--~-vi~~~~~~~~~~~~i~~~~--~~~ 140 (255)
+++||+|+ |++|...++.+...|+ +|+++.+ ++++.+.. .+ .+.. . ..|..+ +..+.+.+.+.. .+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 36899997 9999999999999999 9988887 44333222 22 2211 1 123332 122333333222 136
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999998874
No 489
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=95.82 E-value=0.028 Score=46.51 Aligned_cols=70 Identities=21% Similarity=0.161 Sum_probs=47.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEe-CCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 73 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 73 ~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
+|+|+|+ |.+|..+++.+...|. +|+++++++++...+.+.+...+. |..+ . +.+.+... ++|+|+++.+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~~--~---~~l~~~~~-~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGE-EVRVLVRPTSDRRNLEGLDVEIVEGDLRD--P---ASLRKAVA-GCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCC-EEEEEEecCccccccccCCceEEEeeCCC--H---HHHHHHHh-CCCEEEEece
Confidence 6899997 9999999999999999 999999887665444334444332 3322 2 22333222 5899998775
No 490
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.82 E-value=0.074 Score=44.71 Aligned_cols=43 Identities=21% Similarity=0.105 Sum_probs=35.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH
Q 025264 68 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 111 (255)
Q Consensus 68 ~~~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~ 111 (255)
-..+.+|||+|+ |-+|..+++.+...|. +|++++++.++.+.+
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~ 50 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKSLHL 50 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence 345679999997 9999999999999999 999988876655443
No 491
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.82 E-value=0.081 Score=41.67 Aligned_cols=78 Identities=19% Similarity=0.273 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-HHHH----HhcCCc--EE-eCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRA----KNFGVT--EF-VNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~-~~~~----~~~g~~--~v-i~~~~~~~~~~~~i~~~~~-- 138 (255)
+..++||+|+ |.+|..+++.+...|. +|+++.++..+ .+.+ +..+.. .+ .|..+ +..+.+.+.+...
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD-KAALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC-HHHHHHHHHHHHHHc
Confidence 3468999998 9999999999999999 87776655443 2222 222322 11 23332 1223333322211
Q ss_pred CCccEEEecCC
Q 025264 139 GGVDYSFECIG 149 (255)
Q Consensus 139 ~~~d~v~d~~g 149 (255)
+++|.++.+.|
T Consensus 83 ~~id~vi~~ag 93 (249)
T PRK12825 83 GRIDILVNNAG 93 (249)
T ss_pred CCCCEEEECCc
Confidence 26999999887
No 492
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=95.81 E-value=0.22 Score=40.91 Aligned_cols=43 Identities=21% Similarity=0.361 Sum_probs=37.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 116 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~ 116 (255)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~ 44 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT 44 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence 57889999999998888888898 99999999999988887664
No 493
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.81 E-value=0.071 Score=44.05 Aligned_cols=88 Identities=17% Similarity=0.215 Sum_probs=54.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhhcCCCccEEEecCC
Q 025264 70 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 149 (255)
Q Consensus 70 ~~~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v~d~~g 149 (255)
.+.+|.|+|.|.+|...++.++..|. +|++.+++.++.. +..... .. .++.+.+. ..|+|+.+..
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~--~~--~~l~e~l~-----~aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA--GR--EELSAFLS-----QTRVLINLLP 199 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec--cc--ccHHHHHh-----cCCEEEECCC
Confidence 57899999999999999999999999 9999987654321 111111 00 22333332 3677766555
Q ss_pred cHHH-----HHHHHHHhccCCceEEEEcc
Q 025264 150 NVSV-----MRAALECCHKGWGTSVIVGV 173 (255)
Q Consensus 150 ~~~~-----~~~~~~~l~~~~G~~v~~g~ 173 (255)
.... -...+..|+++ ..+|.+|-
T Consensus 200 lt~~T~~li~~~~l~~mk~g-a~lIN~aR 227 (312)
T PRK15469 200 NTPETVGIINQQLLEQLPDG-AYLLNLAR 227 (312)
T ss_pred CCHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence 3221 13455666775 66666643
No 494
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.80 E-value=0.077 Score=42.45 Aligned_cols=79 Identities=19% Similarity=0.294 Sum_probs=48.8
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCc--chHHHH-HhcCC--cE-EeCCCCCCchHHHHHHhhcC--
Q 025264 70 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRA-KNFGV--TE-FVNPKDHDKPIQQVLVDLTD-- 138 (255)
Q Consensus 70 ~~~~vlI~G~---g~vG~~a~~l~~~~g~~~v~~~~~~~--~~~~~~-~~~g~--~~-vi~~~~~~~~~~~~i~~~~~-- 138 (255)
.+++++|+|+ +++|.+.++.+...|+ +|+.++++. +..+.+ .+++. .. ..|-.+ ++...+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 4678999985 6999999998888999 999988653 333333 33432 11 133333 1223222322221
Q ss_pred CCccEEEecCCc
Q 025264 139 GGVDYSFECIGN 150 (255)
Q Consensus 139 ~~~d~v~d~~g~ 150 (255)
+.+|+++++.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 379999998874
No 495
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=95.80 E-value=0.17 Score=41.51 Aligned_cols=43 Identities=26% Similarity=0.471 Sum_probs=37.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCC
Q 025264 73 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 116 (255)
Q Consensus 73 ~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~ 116 (255)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+
T Consensus 3 ~Ig~IGlG~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~g~ 45 (296)
T PRK15461 3 AIAFIGLGQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDKGA 45 (296)
T ss_pred eEEEEeeCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHcCC
Confidence 68889999999999888888898 99999999999888877664
No 496
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=95.79 E-value=0.066 Score=42.10 Aligned_cols=104 Identities=23% Similarity=0.249 Sum_probs=64.8
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC--CCeEEEEcCCcchHHHHHhcCCc----EEeCCCCCCchHHHHHHhhc
Q 025264 64 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG--ASRVIGIDIDPKKFDRAKNFGVT----EFVNPKDHDKPIQQVLVDLT 137 (255)
Q Consensus 64 ~~~~~~~~~~vlI~G~g~vG~~a~~l~~~~g--~~~v~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~~i~~~~ 137 (255)
......++.+||..|+|. |..+..+++..+ . ++++++.+++..+.+++.-.. ..++... .+..+ . ...
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~-~-~~~ 118 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTG-EVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEA-L-PFP 118 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHHhhcccccccCeEEEe--ccccc-C-CCC
Confidence 444566788999999876 778888888775 6 999999988877777553211 0011110 11111 0 011
Q ss_pred CCCccEEEecCC------cHHHHHHHHHHhccCCceEEEEccC
Q 025264 138 DGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGVA 174 (255)
Q Consensus 138 ~~~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~~ 174 (255)
.+.+|+|+.... ....+..+.++++++ |+++.+...
T Consensus 119 ~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~ 160 (239)
T PRK00216 119 DNSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFS 160 (239)
T ss_pred CCCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEec
Confidence 236899874221 233478888999997 998877553
No 497
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=95.79 E-value=0.2 Score=43.16 Aligned_cols=73 Identities=22% Similarity=0.337 Sum_probs=52.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHhcCCcEEeCCCCCCchHHHHHHhh---------cCC-Cc
Q 025264 72 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL---------TDG-GV 141 (255)
Q Consensus 72 ~~vlI~G~g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~i~~~---------~~~-~~ 141 (255)
.+|.|+|.|-+|+..+..+...|. +|+++++++++.+.++.-.. .+ .+ +.+.+.+++. +.- ..
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~g~~-~~---~e--~~l~~~l~~~~~~g~l~~~~~~~~a 76 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINRGEI-HI---VE--PDLDMVVKTAVEGGYLRATTTPEPA 76 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHCCCC-Cc---CC--CCHHHHHHHHhhcCceeeecccccC
Confidence 579999999999999998888998 99999999999887654322 12 22 4444443321 111 58
Q ss_pred cEEEecCCcH
Q 025264 142 DYSFECIGNV 151 (255)
Q Consensus 142 d~v~d~~g~~ 151 (255)
|++|-|++.+
T Consensus 77 Dvvii~vptp 86 (415)
T PRK11064 77 DAFLIAVPTP 86 (415)
T ss_pred CEEEEEcCCC
Confidence 9999999975
No 498
>PRK06849 hypothetical protein; Provisional
Probab=95.77 E-value=0.12 Score=44.13 Aligned_cols=92 Identities=18% Similarity=0.130 Sum_probs=58.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HhcCCcEEeC-CCCCCchHHHHHHhhcCC-CccEEEe
Q 025264 71 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVN-PKDHDKPIQQVLVDLTDG-GVDYSFE 146 (255)
Q Consensus 71 ~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi~-~~~~~~~~~~~i~~~~~~-~~d~v~d 146 (255)
..+|||+|+ .+.|+..++.++..|. +|++++.++...... +-......+. ++.+++.+.+.+.++... ++|+++-
T Consensus 4 ~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vIP 82 (389)
T PRK06849 4 KKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLIP 82 (389)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 478999998 5789999999999999 999999876443221 1111112232 222225577777776655 8999997
Q ss_pred cCCcHHHHHHHHHHhcc
Q 025264 147 CIGNVSVMRAALECCHK 163 (255)
Q Consensus 147 ~~g~~~~~~~~~~~l~~ 163 (255)
+......+......+..
T Consensus 83 ~~e~~~~~a~~~~~l~~ 99 (389)
T PRK06849 83 TCEEVFYLSHAKEELSA 99 (389)
T ss_pred CChHHHhHHhhhhhhcC
Confidence 76543222233344555
No 499
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.065 Score=42.59 Aligned_cols=79 Identities=18% Similarity=0.201 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCCcchHHHH-Hh---cCCc-EE--eCCCCCCchHHHHHHhhc---
Q 025264 70 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA-KN---FGVT-EF--VNPKDHDKPIQQVLVDLT--- 137 (255)
Q Consensus 70 ~~~~vlI~G~-g~vG~~a~~l~~~~g~~~v~~~-~~~~~~~~~~-~~---~g~~-~v--i~~~~~~~~~~~~i~~~~--- 137 (255)
.+.+++|+|+ |.+|..+++.+...|+ +|++. .++.++.+.+ .+ .+.. .+ .|-.+ ++.+.+.+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHh
Confidence 3578999997 9999999998888999 88765 5665554333 22 2321 11 23333 123333333321
Q ss_pred ----C-CCccEEEecCCc
Q 025264 138 ----D-GGVDYSFECIGN 150 (255)
Q Consensus 138 ----~-~~~d~v~d~~g~ 150 (255)
+ +++|+++.+.|.
T Consensus 83 ~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGI 100 (254)
T ss_pred ccccCCCCccEEEECCCC
Confidence 1 268999998874
No 500
>PRK07069 short chain dehydrogenase; Validated
Probab=95.76 E-value=0.058 Score=42.73 Aligned_cols=75 Identities=25% Similarity=0.367 Sum_probs=47.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-cchHHHHH-hc----CCcE----EeCCCCCCchHHHHHHhhcC--CC
Q 025264 74 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDRAK-NF----GVTE----FVNPKDHDKPIQQVLVDLTD--GG 140 (255)
Q Consensus 74 vlI~G~-g~vG~~a~~l~~~~g~~~v~~~~~~-~~~~~~~~-~~----g~~~----vi~~~~~~~~~~~~i~~~~~--~~ 140 (255)
++|+|+ |++|...++.+...|+ +|++++++ .++.+.+. ++ +... ..|..+ ++.+.+.+.+... ++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD-EAQWQALLAQAADAMGG 79 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 789987 9999999999988999 99999987 55444332 21 2111 123332 1333333333221 36
Q ss_pred ccEEEecCCc
Q 025264 141 VDYSFECIGN 150 (255)
Q Consensus 141 ~d~v~d~~g~ 150 (255)
+|+++.+.|.
T Consensus 80 id~vi~~ag~ 89 (251)
T PRK07069 80 LSVLVNNAGV 89 (251)
T ss_pred ccEEEECCCc
Confidence 8999998873
Done!