Query 025265
Match_columns 255
No_of_seqs 162 out of 1269
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 06:54:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025265.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025265hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 2.9E-38 9.9E-43 294.6 17.2 192 51-254 6-221 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 8.1E-34 2.8E-38 263.3 19.1 189 52-253 8-225 (403)
3 2apr_A Rhizopuspepsin; hydrola 100.0 2.9E-33 9.8E-38 252.6 17.1 166 64-253 13-191 (325)
4 1t6e_X Xylanase inhibitor; two 100.0 2E-33 6.8E-38 258.9 15.1 182 53-253 2-200 (381)
5 1mpp_A Pepsin; hydrolase(acid 100.0 2.1E-32 7.3E-37 250.0 18.4 175 52-254 6-205 (361)
6 3c9x_A Trichoderma reesei aspa 100.0 9.9E-33 3.4E-37 249.5 15.9 166 64-253 13-191 (329)
7 1b5f_A Protein (cardosin A); h 100.0 6.9E-33 2.4E-37 240.3 14.2 171 55-253 4-187 (239)
8 3psg_A Pepsinogen; hydrolase(a 100.0 9.4E-33 3.2E-37 253.9 15.3 174 54-253 46-231 (370)
9 1oew_A Endothiapepsin; hydrola 100.0 2.2E-32 7.6E-37 247.2 16.3 165 64-253 13-190 (329)
10 1tzs_A Cathepsin E; hydrolase, 100.0 3.3E-32 1.1E-36 248.1 16.3 172 54-253 13-200 (351)
11 2x0b_A Renin; hydrolase-hormon 100.0 1.5E-32 5E-37 253.8 14.0 172 53-253 50-241 (383)
12 1am5_A Pepsin, acid proteinase 100.0 5.7E-32 1.9E-36 243.8 16.8 170 55-252 3-186 (324)
13 3cms_A Chymosin B; hydrolase, 100.0 2.1E-32 7.2E-37 246.6 12.7 172 54-253 4-188 (323)
14 3k1w_A Renin; protease, altern 100.0 3.5E-32 1.2E-36 246.3 13.7 173 52-253 6-198 (341)
15 1j71_A Candidapepsin, aspartic 100.0 6.2E-32 2.1E-36 244.6 14.3 168 53-253 2-192 (334)
16 3fv3_A SAPP1P-secreted asparti 100.0 2.1E-31 7.1E-36 241.2 17.2 167 53-253 2-194 (339)
17 1dpj_A Proteinase A; proteinas 100.0 4.5E-32 1.5E-36 244.9 12.7 171 55-253 4-191 (329)
18 2qzx_A Candidapepsin-5; aspart 100.0 1.7E-31 5.8E-36 242.3 15.8 168 53-253 2-192 (342)
19 4aa9_A Chymosin; hydrolase, as 100.0 4.8E-32 1.6E-36 243.6 11.9 170 56-253 3-185 (320)
20 1htr_B Gastricsin; aspartyl pr 100.0 5.5E-32 1.9E-36 244.3 12.3 169 56-253 5-188 (329)
21 3pvk_A Candidapepsin-2; hydrol 100.0 4E-31 1.4E-35 239.4 15.9 166 54-253 3-191 (342)
22 2bju_A Plasmepsin II; aspartic 100.0 2.5E-31 8.4E-36 250.4 14.2 170 54-252 128-313 (453)
23 1miq_A Plasmepsin; aspartic pr 100.0 1.5E-31 5.1E-36 246.2 10.5 170 54-253 52-238 (375)
24 1ibq_A Aspergillopepsin; aspar 100.0 1.1E-30 3.9E-35 235.6 14.7 163 64-253 12-186 (325)
25 1qdm_A Prophytepsin; aspartic 100.0 4.9E-31 1.7E-35 250.0 12.7 171 54-252 42-229 (478)
26 1wkr_A Polyporopepsin; hydrola 100.0 4.8E-30 1.6E-34 232.6 17.4 157 55-253 4-182 (340)
27 1izd_A Aspartic proteinase; su 100.0 1E-30 3.6E-35 235.8 12.5 162 65-253 14-187 (323)
28 3qvc_A Histo-aspartic protease 100.0 1.3E-30 4.4E-35 245.5 13.1 169 55-253 128-313 (451)
29 1bxo_A Protein (penicillopepsi 100.0 9.2E-31 3.1E-35 236.0 11.4 162 65-253 14-187 (323)
30 1yg9_A Aspartic protease BLA G 100.0 3.5E-30 1.2E-34 233.0 10.7 168 56-253 9-192 (330)
31 2ewy_A Beta-secretase 2; BACE2 100.0 4.9E-29 1.7E-33 229.3 16.5 163 65-253 12-194 (383)
32 2qp8_A Beta-secretase 1; BACE1 100.0 2.7E-29 9.4E-34 232.1 13.8 169 56-253 13-205 (395)
33 3vf3_A Beta-secretase 1; struc 100.0 2E-28 6.8E-33 226.6 14.0 162 65-253 27-212 (402)
34 3lpj_A Beta-secretase 1; alzhe 100.0 1.4E-28 4.7E-33 231.6 12.9 162 65-253 73-258 (455)
35 1lya_A Cathepsin D; lysosomal 99.9 1.7E-21 5.8E-26 146.5 8.7 88 55-166 4-95 (97)
36 1lya_B Cathepsin D; lysosomal 99.3 4.5E-12 1.5E-16 108.9 7.5 83 171-253 2-98 (241)
37 3liy_A Protease; hydrolase, hy 77.1 2.4 8.1E-05 31.9 3.8 29 69-97 12-43 (116)
38 1fmb_A EIAV protease; hydrolas 76.6 2.7 9.2E-05 30.9 4.0 25 69-95 10-34 (104)
39 2hs1_A HIV-1 protease; ultra-h 75.9 2.9 9.9E-05 30.5 3.9 26 69-96 10-35 (99)
40 2i1a_A DNA damage-inducible pr 73.9 3 0.0001 31.9 3.9 30 65-96 24-53 (148)
41 3ec0_A Protease; HIV-2, inhibi 70.5 4.4 0.00015 29.5 3.8 26 69-96 10-35 (99)
42 2hah_A Protease, retropepsin; 63.9 6.7 0.00023 29.4 3.7 23 72-96 18-40 (116)
43 3sqf_A Protease; folded monome 59.3 9.4 0.00032 28.5 3.8 27 69-97 11-37 (114)
44 3s8i_A Protein DDI1 homolog 1; 58.3 9 0.00031 29.7 3.7 30 65-96 22-51 (148)
45 3slz_A GAG-Pro-POL polyprotein 44.8 21 0.00072 27.2 3.8 28 67-96 22-49 (132)
46 3ka2_A [L-Ala51;Gly51']HIV-1 p 44.4 20 0.00067 29.5 3.8 25 69-95 10-34 (203)
47 2rsp_A RSV protease; hydrolase 40.7 22 0.00076 26.8 3.3 20 78-97 29-48 (124)
48 1b5f_A Protein (cardosin A); h 38.8 36 0.0012 27.9 4.7 30 67-96 189-226 (239)
49 1lya_B Cathepsin D; lysosomal 30.2 49 0.0017 26.9 4.1 27 71-97 107-137 (241)
50 2apr_A Rhizopuspepsin; hydrola 28.1 61 0.0021 27.7 4.5 27 71-97 201-229 (325)
51 1oew_A Endothiapepsin; hydrola 26.8 78 0.0027 27.1 5.0 27 71-97 200-229 (329)
52 1ibq_A Aspergillopepsin; aspar 26.2 85 0.0029 26.8 5.1 32 66-97 188-225 (325)
53 3c9x_A Trichoderma reesei aspa 25.8 48 0.0017 28.4 3.5 32 66-97 193-230 (329)
54 3ka2_A [L-Ala51;Gly51']HIV-1 p 25.6 62 0.0021 26.5 3.8 25 69-95 114-138 (203)
55 1bxo_A Protein (penicillopepsi 23.0 54 0.0018 28.1 3.2 26 72-97 198-224 (323)
56 1qdm_A Prophytepsin; aspartic 22.9 87 0.003 28.7 4.7 31 67-97 232-270 (478)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.9e-38 Score=294.60 Aligned_cols=192 Identities=24% Similarity=0.418 Sum_probs=157.6
Q ss_pred CCceEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCC
Q 025265 51 CSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (255)
Q Consensus 51 ~s~~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~ 130 (255)
.+++++|++++. .+++|+++|+||||||++.|+|||||+++||+|. +|. ....|.+ +.|.++.|.....
T Consensus 6 ~~~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c~-----~Sst~~~----v~C~s~~C~~~~~ 74 (413)
T 3vla_A 6 PSALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QNY-----VSSTYRP----VRCRTSQCSLSGS 74 (413)
T ss_dssp CSEEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SSC-----CCTTCEE----CBTTSHHHHHTTC
T ss_pred CccEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CCC-----CCCCcCc----cCCCccccccccc
Confidence 467899999884 6899999999999999999999999999999998 662 1233443 8999999998765
Q ss_pred CCCC--------CCCCCCCceeeeec-CCCceEeEEEEEEEEEEeecCCC-----cCCCceEEeeeEecCCCCCCCCcce
Q 025265 131 PGHH--------NCEDPAQCDYELEY-ADGGSSLGVLVKDAFAFNYTNGQ-----RLNPRLALGCGYNQVPGASYHPLDG 196 (255)
Q Consensus 131 ~~~~--------~C~~~~~c~~~~~Y-~dgs~~~G~l~~Dtl~l~~~~g~-----~~~~~~~fGc~~~~~~~~~~~~~dG 196 (255)
+.+. .|. .+.|.|.+.| +|++.+.|.|++|+|+|+.++|. +.+++++|||++++.........||
T Consensus 75 ~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dG 153 (413)
T 3vla_A 75 IACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVG 153 (413)
T ss_dssp CEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCE
T ss_pred CCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCccccccc
Confidence 4322 343 3679999999 58888999999999999876654 4568999999987521123467899
Q ss_pred EEeeCCCCCchHHHhhhcCCccceEEEecCC--CCCeEEEECCCCC-------CCCC-eEEEECccCC
Q 025265 197 ILGLGKGKSSIVSQLHSQKLIRNVVGHCLSG--GGGGFLFFGDDLY-------DSSR-VVWTSMSSDY 254 (255)
Q Consensus 197 IlGLg~~~~Sl~~ql~~~g~i~~~FS~cL~~--~~~G~l~fG~~~~-------~~~~-l~~tPli~~~ 254 (255)
|||||++++|+++||..+++++++|||||++ ..+|+|+||+++. +.++ ++||||+.++
T Consensus 154 IlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~ 221 (413)
T 3vla_A 154 MAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNP 221 (413)
T ss_dssp EEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCS
T ss_pred ccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCC
Confidence 9999999999999999988889999999986 4689999999874 3567 9999999874
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=8.1e-34 Score=263.32 Aligned_cols=189 Identities=20% Similarity=0.340 Sum_probs=150.5
Q ss_pred CceEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 025265 52 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (255)
Q Consensus 52 s~~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~ 131 (255)
+.+.+||.++ +.+++|+++|.||||+|++.|+|||||+++||+|. +| . ....|.+ +.|.++.|.....+
T Consensus 8 ~~~~~pl~~~-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~~---~--~Sst~~~----~~C~s~~C~~~~~~ 76 (403)
T 3aup_A 8 NLVVLPVQND-GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQ---Y--SSKTYQA----PFCHSTQCSRANTH 76 (403)
T ss_dssp CCEEEEEEEC-TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SC---C--CCSSCBC----CCTTBHHHHHTTCC
T ss_pred ccEEEeeecC-CCCceEEEEEECCCCCceeEEEEECCCCceeECCC-CC---C--CCCCCCc----cCCCCccccCcccc
Confidence 4577999854 25889999999999999999999999999999998 55 2 2233443 79999999887654
Q ss_pred C--------CCCCCCCCCceeeeecC-CCceEeEEEEEEEEEEeecCCC-------cCCCceEEeeeEecCCC-CCCCCc
Q 025265 132 G--------HHNCEDPAQCDYELEYA-DGGSSLGVLVKDAFAFNYTNGQ-------RLNPRLALGCGYNQVPG-ASYHPL 194 (255)
Q Consensus 132 ~--------~~~C~~~~~c~~~~~Y~-dgs~~~G~l~~Dtl~l~~~~g~-------~~~~~~~fGc~~~~~~~-~~~~~~ 194 (255)
. ...|. .+.|.|.+.|+ |++.+.|.+++|+|+|+.++|. ..++++.|||++..... ......
T Consensus 77 ~c~~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~ 155 (403)
T 3aup_A 77 QCLSCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNT 155 (403)
T ss_dssp CEEECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTC
T ss_pred CccccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCC
Confidence 2 12353 36899999998 7889999999999999875443 45688999999875221 234578
Q ss_pred ceEEeeCCCCCchHHHhhhcCCccceEEEecCC--CCCeEEEECCCCC--C--C-C-----CeEEEECccC
Q 025265 195 DGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSG--GGGGFLFFGDDLY--D--S-S-----RVVWTSMSSD 253 (255)
Q Consensus 195 dGIlGLg~~~~Sl~~ql~~~g~i~~~FS~cL~~--~~~G~l~fG~~~~--~--~-~-----~l~~tPli~~ 253 (255)
+||||||++.+|++.||.+..+.+++||+||.+ ..+|.|+||+ |. + . | +|.||||+.+
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~ 225 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTIT 225 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEEC
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccC
Confidence 999999999999999997665448999999986 4689999999 63 3 3 4 8999999987
No 3
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.9e-33 Score=252.63 Aligned_cols=166 Identities=27% Similarity=0.452 Sum_probs=139.7
Q ss_pred CCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCce
Q 025265 64 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 143 (255)
Q Consensus 64 ~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~~~C~~~~~c~ 143 (255)
.+.+|+++|.||||+|++.|++||||+++||+|. +|..| .+.++.|+|++|+ ++ ....|.
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~c-~~~~~~y~~~~Ss-----------------T~-~~~~~~ 72 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNC-GSGQTKYDPNQSS-----------------TY-QADGRT 72 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSC-CTTSCCBCGGGCT-----------------TC-EEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccC-CCchH-hcCCCCCCcccCC-----------------Ce-eeCCCE
Confidence 3679999999999999999999999999999999 89999 6678899998874 11 114689
Q ss_pred eeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeCCCCCc-------hHHHhhhcCC
Q 025265 144 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSS-------IVSQLHSQKL 216 (255)
Q Consensus 144 ~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~~~~~~~dGIlGLg~~~~S-------l~~ql~~~g~ 216 (255)
|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++.....+...+.+||||||+..++ +..||+++|+
T Consensus 73 ~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~ 148 (325)
T 2apr_A 73 WSISYGDGSSASGILAKDNVNLG----GLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGL 148 (325)
T ss_dssp EEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTS
T ss_pred EEEEECCCCCEEEEEEEEEEEEC----CEEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHhcCC
Confidence 99999999889999999999996 456789999999876322223358999999998764 6789999998
Q ss_pred c-cceEEEecCC---CCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 217 I-RNVVGHCLSG---GGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 217 i-~~~FS~cL~~---~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
| +++||+||.+ ..+|.|+||++|. +.++++|+||+.+
T Consensus 149 i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 191 (325)
T 2apr_A 149 ISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNS 191 (325)
T ss_dssp CSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCT
T ss_pred CCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCC
Confidence 9 8999999953 4689999999974 5789999999753
No 4
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2e-33 Score=258.91 Aligned_cols=182 Identities=23% Similarity=0.413 Sum_probs=145.0
Q ss_pred ceEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCC
Q 025265 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPG 132 (255)
Q Consensus 53 ~~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~ 132 (255)
++++||.++ +.+.+|+++|+|||| |+|||||+++||+|. +|. .|. .+.|.++.|.....++
T Consensus 2 ~~~~pv~~~-~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~-~~~--------~~~----~~~C~s~~C~~~~~~~ 62 (381)
T 1t6e_X 2 PVLAPVTKD-PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GGQ--------PPA----EIPCSSPTCLLANAYP 62 (381)
T ss_dssp CEEEEEEEC-TTTCCEEEEEETTEE-----EEEETTCCCEEECCC-TTC--------CCC----CCBTTSHHHHHHHSSC
T ss_pred ceEEeEEec-CCCcEEEEEEeCCCE-----EEEECCCCceEEeCC-CCC--------CCC----ccCCCCchhccccCCC
Confidence 367888755 358899999999998 999999999999997 552 133 3889999998755444
Q ss_pred CCCCCC--------CCCc-eeeeecCCCceEeEEEEEEEEEEeecCCCcCCCce----EEeeeEecCCCCCCCCcceEEe
Q 025265 133 HHNCED--------PAQC-DYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRL----ALGCGYNQVPGASYHPLDGILG 199 (255)
Q Consensus 133 ~~~C~~--------~~~c-~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~----~fGc~~~~~~~~~~~~~dGIlG 199 (255)
...|.. ...| .|.+.|+||+.++|.+++|+|+|+..+|+..++++ +|||++.+.........|||||
T Consensus 63 ~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlG 142 (381)
T 1t6e_X 63 APGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAG 142 (381)
T ss_dssp CTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEE
T ss_pred CCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCceEEE
Confidence 445642 2467 59999999987899999999999865554444544 6799987521122467899999
Q ss_pred eCCCCCchHHHhhhcCCccceEEEecCCCCCeEEEECCCCC----CCCCeEEEECccC
Q 025265 200 LGKGKSSIVSQLHSQKLIRNVVGHCLSGGGGGFLFFGDDLY----DSSRVVWTSMSSD 253 (255)
Q Consensus 200 Lg~~~~Sl~~ql~~~g~i~~~FS~cL~~~~~G~l~fG~~~~----~~~~l~~tPli~~ 253 (255)
||++++|+++||..+++++++||+||++..+|+|+||+++. +.++++||||+.+
T Consensus 143 Lg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~ 200 (381)
T 1t6e_X 143 LANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTK 200 (381)
T ss_dssp CSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCC
T ss_pred eCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccC
Confidence 99999999999999887799999999876789999999864 3689999999986
No 5
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.1e-32 Score=249.98 Aligned_cols=175 Identities=23% Similarity=0.367 Sum_probs=145.0
Q ss_pred CceEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC---CCCCCCCCCCCCCCCCCCCCCcccccC
Q 025265 52 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV---RCVEAPHPLYRPSNDLVPCEDPICASL 128 (255)
Q Consensus 52 s~~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~---~C~~~~~~~f~p~~S~v~C~s~~C~~~ 128 (255)
+...+|+.+. .+.+|+++|.||||+|++.|+|||||+++||+|. +|. .|.. ++.|+|++|+
T Consensus 6 ~~~~~~l~~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~C~~--~~~y~~~~Ss----------- 69 (361)
T 1mpp_A 6 SVDTPGLYDF--DLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK-GCDNSEGCVG--KRFFDPSSSS----------- 69 (361)
T ss_dssp CEEEEEEEET--TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCGGGTCCS--SCCBCGGGCT-----------
T ss_pred ccceEEeecC--CCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCC-CCCCCccCCC--CCcCCCccCC-----------
Confidence 4556788753 3789999999999999999999999999999999 898 7874 6889998874
Q ss_pred CCCCCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCC------CCCCCCcceEEeeCC
Q 025265 129 HAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVP------GASYHPLDGILGLGK 202 (255)
Q Consensus 129 ~~~~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~------~~~~~~~dGIlGLg~ 202 (255)
++ ....|.|.+.|++|+ +.|.+++|+|+|+ +..++++.|||++.... .+.....+||||||+
T Consensus 70 ------T~-~~~~~~~~i~Yg~Gs-~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~ 137 (361)
T 1mpp_A 70 ------TF-KETDYNLNITYGTGG-ANGIYFRDSITVG----GATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAY 137 (361)
T ss_dssp ------TC-EEEEEEEEEECSSCE-EEEEEEEEEEEET----TEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSC
T ss_pred ------ce-EecCCeEEEEECCce-EEEEEEEEEEEEC----CEEEeceEEEEEEeccCccccccccccCCCCCEEEeCC
Confidence 11 114689999999995 8999999999996 46778999999988632 123457899999999
Q ss_pred CCCc------------hHHHhhhcCCc-cceEEEecCCC-CCeEEEECCCCC--CCCCeEEEECccCC
Q 025265 203 GKSS------------IVSQLHSQKLI-RNVVGHCLSGG-GGGFLFFGDDLY--DSSRVVWTSMSSDY 254 (255)
Q Consensus 203 ~~~S------------l~~ql~~~g~i-~~~FS~cL~~~-~~G~l~fG~~~~--~~~~l~~tPli~~~ 254 (255)
+.++ ++.+|.++|+| +++||+||.+. .+|.|+||++|. +.++++|+||+.+.
T Consensus 138 ~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~ 205 (361)
T 1mpp_A 138 PDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSR 205 (361)
T ss_dssp GGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEET
T ss_pred cccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCC
Confidence 8665 45589999999 89999999874 579999999975 57899999998753
No 6
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=9.9e-33 Score=249.51 Aligned_cols=166 Identities=21% Similarity=0.296 Sum_probs=137.9
Q ss_pred CCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCce
Q 025265 64 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 143 (255)
Q Consensus 64 ~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~~~C~~~~~c~ 143 (255)
.+.+|+++|.||||+|++.|++||||+++||+|. +|..|..+.++.|+|++|+ .|+ .-..|.
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~~~~~y~~~~Ss------T~~-----------~~~~~~ 74 (329)
T 3c9x_A 13 ADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSS-ETPKSSATGHAIYTPSKSS------TSK-----------KVSGAS 74 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCGGGCT------TCE-----------ECTTCB
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecC-CCCccccCCCCcCCcccCc------Cce-----------EcCCCe
Confidence 4779999999999999999999999999999999 8998876678899998774 111 113689
Q ss_pred eeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCC-CCCCcceEEeeCCCCCc---------hHHHhhh
Q 025265 144 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSS---------IVSQLHS 213 (255)
Q Consensus 144 ~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~~-~~~~~dGIlGLg~~~~S---------l~~ql~~ 213 (255)
|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++.....+ .....+||||||+..++ +..+|.+
T Consensus 75 ~~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~ 150 (329)
T 3c9x_A 75 WSISYGDGSSSSGDVYTDKVTIG----GFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAAS 150 (329)
T ss_dssp EEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHT
T ss_pred EEEEeCCCCcEEEEEEEEEEEEC----CEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHH
Confidence 99999999879999999999996 4667899999998763211 12578999999998655 5667877
Q ss_pred cCCc-cceEEEecCCCCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 214 QKLI-RNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 214 ~g~i-~~~FS~cL~~~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+ | +++||+||.+..+|.|+||++|. +.++++|+||+.+
T Consensus 151 ~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 191 (329)
T 3c9x_A 151 S--LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNS 191 (329)
T ss_dssp T--SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCT
T ss_pred h--cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCC
Confidence 6 6 89999999876789999999974 6789999999853
No 7
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=6.9e-33 Score=240.33 Aligned_cols=171 Identities=19% Similarity=0.312 Sum_probs=139.9
Q ss_pred EEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC---CCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 025265 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV---RCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (255)
Q Consensus 55 ~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~---~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~ 131 (255)
.+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|. +|. .|.. ++.|+|++|+
T Consensus 4 ~~~l~n~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~~C~~--~~~y~~~~Ss-------------- 64 (239)
T 1b5f_A 4 VVALTND--RDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS-KCINSKACRA--HSMYESSDSS-------------- 64 (239)
T ss_dssp EEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSCHHHHT--SCCBCGGGCT--------------
T ss_pred eeeeeec--CCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcC-CCCCCcccCC--CCCCCCccCC--------------
Confidence 4667553 3789999999999999999999999999999999 896 5774 6789998774
Q ss_pred CCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc--hH
Q 025265 132 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS--IV 208 (255)
Q Consensus 132 ~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~-~~~~~~dGIlGLg~~~~S--l~ 208 (255)
++ ....|.|.+.|++|+ +.|.+++|+|+|+ +..++++.|||+...... +.....+||||||+..++ +.
T Consensus 65 ---T~-~~~~~~~~i~Yg~Gs-~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~ 135 (239)
T 1b5f_A 65 ---TY-KENGTFGAIIYGTGS-ITGFFSQDSVTIG----DLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVW 135 (239)
T ss_dssp ---TC-EEEEEEEEEECSSCE-EEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHH
T ss_pred ---Ce-eeCCcEEEEEECCCc-EEEEEEEEEEEEC----CcEEccEEEEEEEeccCccccccCcceEEecCccccccHHH
Confidence 11 114688999999995 8999999999996 456789999999875211 234578999999999987 55
Q ss_pred HHhhhcCCc-cceEEEecCC----CCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 209 SQLHSQKLI-RNVVGHCLSG----GGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 209 ~ql~~~g~i-~~~FS~cL~~----~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
.+|.++++| +++||+||.+ ..+|.|+||++|. +.++++|+||+.+
T Consensus 136 ~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 187 (239)
T 1b5f_A 136 YNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ 187 (239)
T ss_dssp HHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE
T ss_pred HHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC
Confidence 678999988 8999999985 2579999999975 5689999999753
No 8
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=9.4e-33 Score=253.86 Aligned_cols=174 Identities=22% Similarity=0.353 Sum_probs=141.8
Q ss_pred eEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q 025265 54 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGH 133 (255)
Q Consensus 54 ~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~ 133 (255)
...||.+. .+.+|+++|+||||||++.|+|||||+++||+|. .|..|..+.++.|+|++|+.
T Consensus 46 ~~~~l~n~--~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~-~C~~~~C~~~~~y~~~~SsT--------------- 107 (370)
T 3psg_A 46 GDEPLENY--LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDSST--------------- 107 (370)
T ss_dssp CCCTTGGG--TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCTT---------------
T ss_pred ceecceec--cCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC-CCCCcccCCCCCCCCccCcC---------------
Confidence 44566543 4789999999999999999999999999999998 89854444678999988741
Q ss_pred CCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc------
Q 025265 134 HNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS------ 206 (255)
Q Consensus 134 ~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~-~~~~~~dGIlGLg~~~~S------ 206 (255)
+ ....|.|.+.|++|+ +.|.+++|+|+|+ +..++++.|||++..... +.....|||||||++.++
T Consensus 108 --~-~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~ 179 (370)
T 3psg_A 108 --F-EATSQELSITYGTGS-MTGILGYDTVQVG----GISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATP 179 (370)
T ss_dssp --C-EEEEEEEEEESSSCE-EEEEEEEEEEEET----TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCC
T ss_pred --c-EECCcEEEEEeCCce-EEEEEEEEEEeeC----CcccCCeEEEEEEeecccccccCCccceeccCCccccccCCCC
Confidence 1 124689999999995 8999999999995 467889999999876321 334678999999998765
Q ss_pred hHHHhhhcCCc-cceEEEecCCC--CCeEEEECCCCC--CCCCeEEEECccC
Q 025265 207 IVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 207 l~~ql~~~g~i-~~~FS~cL~~~--~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+..+|.++|+| +++||+||.+. .+|.|+|||+|. +.++++|+||+.+
T Consensus 180 ~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~ 231 (370)
T 3psg_A 180 VFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE 231 (370)
T ss_dssp HHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE
T ss_pred HHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc
Confidence 56789999999 89999999863 589999999985 6899999999753
No 9
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.2e-32 Score=247.19 Aligned_cols=165 Identities=21% Similarity=0.289 Sum_probs=136.0
Q ss_pred CCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCce
Q 025265 64 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 143 (255)
Q Consensus 64 ~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~~~C~~~~~c~ 143 (255)
.+.+|+++|.||||+|++.|++||||+++||+|. +|..|.. .++.|+|++|+ ++.....|.
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~-~~~~y~~~~Ss-----------------T~~~~~~~~ 73 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSS-ETTASEV-XQTIYTPSKST-----------------TAKLLSGAT 73 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCGGGC--CCCBCGGGCT-----------------TCEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecC-CCCcccc-ccCccCCccCc-----------------cceecCCCe
Confidence 4779999999999999999999999999999999 8988765 67899998874 110113589
Q ss_pred eeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCC-CCCCcceEEeeCCCCCc---------hHHHhhh
Q 025265 144 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSS---------IVSQLHS 213 (255)
Q Consensus 144 ~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~~-~~~~~dGIlGLg~~~~S---------l~~ql~~ 213 (255)
|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++.....+ .....+||||||+..++ +..||.+
T Consensus 74 ~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~ 149 (329)
T 1oew_A 74 WSISYGDGSSSSGDVYTDTVSVG----GLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKA 149 (329)
T ss_dssp EEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTT
T ss_pred EEEEeCCCCcEEEEEEEEEEEEC----CEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHH
Confidence 99999999779999999999996 4667899999998763211 12578999999998765 5578877
Q ss_pred cCCc-cceEEEecCCCCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 214 QKLI-RNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 214 ~g~i-~~~FS~cL~~~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+ | +++||+||.+..+|.|+||++|. +.++++|+||+.+
T Consensus 150 ~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 190 (329)
T 1oew_A 150 S--LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTK 190 (329)
T ss_dssp T--SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCT
T ss_pred h--ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCC
Confidence 6 6 89999999876789999999975 5789999999853
No 10
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=99.98 E-value=3.3e-32 Score=248.14 Aligned_cols=172 Identities=22% Similarity=0.355 Sum_probs=141.1
Q ss_pred eEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 025265 54 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (255)
Q Consensus 54 ~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~--~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~ 131 (255)
..+||.+ +.+.+|+++|.||||+|++.|++||||+++||+|. .|. .|. .++.|+|++|+
T Consensus 13 ~~~~l~n--~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss-------------- 73 (351)
T 1tzs_A 13 AKEPLIN--YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV-YCTSPACK--THSRFQPSQSS-------------- 73 (351)
T ss_dssp -CCTTGG--GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGT--TSCCBCGGGCT--------------
T ss_pred cceecee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccC--CCCcCCcccCc--------------
Confidence 3456654 23789999999999999999999999999999999 897 676 46899998874
Q ss_pred CCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc----
Q 025265 132 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS---- 206 (255)
Q Consensus 132 ~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~-~~~~~~dGIlGLg~~~~S---- 206 (255)
++ ....|.|.+.|++|+ +.|.+++|+|+|+ +..++++.|||++..... +.....+||||||++.++
T Consensus 74 ---T~-~~~~~~~~i~Yg~Gs-~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 144 (351)
T 1tzs_A 74 ---TY-SQPGQSFSIQYGTGS-LSGIIGADQVSVE----GLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGV 144 (351)
T ss_dssp ---TC-BCCSCEEEEESSSCE-EEEEEEEEEEEET----TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGC
T ss_pred ---ce-EECCCEEEEEeCCCC-eEEEEEEeEEEEC----CeEECCeEEEEEEeccccccccCCCceEEecCCccccccCC
Confidence 11 125799999999995 8999999999996 466789999999875221 224578999999998765
Q ss_pred --hHHHhhhcCCc-cceEEEecCCC----CCeEEEECCCCC--CCCCeEEEECccC
Q 025265 207 --IVSQLHSQKLI-RNVVGHCLSGG----GGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 207 --l~~ql~~~g~i-~~~FS~cL~~~----~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+..+|.++++| +++||+||.+. .+|.|+||++|. +.++++|+||+.+
T Consensus 145 ~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 200 (351)
T 1tzs_A 145 TPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ 200 (351)
T ss_dssp CCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE
T ss_pred CcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC
Confidence 56789999999 89999999863 279999999975 5789999999753
No 11
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=99.98 E-value=1.5e-32 Score=253.82 Aligned_cols=172 Identities=20% Similarity=0.329 Sum_probs=141.6
Q ss_pred ceEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC----CCCCCCCCCCCCCCCCCCCCCcccccC
Q 025265 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV----RCVEAPHPLYRPSNDLVPCEDPICASL 128 (255)
Q Consensus 53 ~~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~----~C~~~~~~~f~p~~S~v~C~s~~C~~~ 128 (255)
...+||.+ +.+.+|+++|+||||||++.|+|||||+++||+|. .|. .|.. |+.|+|++|+
T Consensus 50 ~~~~~l~n--~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~-~C~~~~~~C~~--~~~y~~~~Ss----------- 113 (383)
T 2x0b_A 50 TSSVILTN--YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACVY--HKLFDASDSS----------- 113 (383)
T ss_dssp -CEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTSHHHHT--SCCBCGGGCT-----------
T ss_pred cceEeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc-CCCCCcccccC--CCCCCCCCCC-----------
Confidence 34577765 34789999999999999999999999999999999 896 5874 6889998874
Q ss_pred CCCCCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc-
Q 025265 129 HAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS- 206 (255)
Q Consensus 129 ~~~~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~-~~~~~~dGIlGLg~~~~S- 206 (255)
++ ....|.|.+.|++|+ ++|.+++|+|+|+ +..++ +.|||++..... +.....|||||||++.+|
T Consensus 114 ------T~-~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~ 180 (383)
T 2x0b_A 114 ------SY-KHNGTELTLRYSTGT-VSGFLSQDIITVG----GITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAI 180 (383)
T ss_dssp ------TC-EEEEEEEEEECSSCE-EEEEEEEEEEEET----TEEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCG
T ss_pred ------cE-EECCcEEEEEcCCcc-EEEEEEeeEEEEc----CceEE-EEEEEEEecCCcccccCCCceEeccCCCcccc
Confidence 11 125789999999995 8999999999996 45677 999999886211 234678999999999876
Q ss_pred -----hHHHhhhcCCc-cceEEEecCCC------CCeEEEECCCCC--CCCCeEEEECccC
Q 025265 207 -----IVSQLHSQKLI-RNVVGHCLSGG------GGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 207 -----l~~ql~~~g~i-~~~FS~cL~~~------~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+..+|.++|+| +++||+||.+. .+|.|+|||+|. +.++++|+||+.+
T Consensus 181 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~ 241 (383)
T 2x0b_A 181 GRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT 241 (383)
T ss_dssp GGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST
T ss_pred CCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC
Confidence 56789999999 89999999863 389999999985 5789999999864
No 12
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=99.98 E-value=5.7e-32 Score=243.79 Aligned_cols=170 Identities=24% Similarity=0.459 Sum_probs=140.8
Q ss_pred EEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCCC
Q 025265 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAPG 132 (255)
Q Consensus 55 ~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~--~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~ 132 (255)
.+||.+. .+.+|+++|.||||+|++.|++||||+++||+|. +|. .|. .++.|+|++|+
T Consensus 3 ~~~l~n~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss--------------- 62 (324)
T 1am5_A 3 TEQMKNE--ADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS-HCSAQACS--NHNKFKPRQSS--------------- 62 (324)
T ss_dssp EEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT-TCCSHHHH--TSCCBCGGGCT---------------
T ss_pred eeeeecC--CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccc--CCCcCCCccCC---------------
Confidence 4677653 4789999999999999999999999999999999 897 576 36889998874
Q ss_pred CCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc-----
Q 025265 133 HHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS----- 206 (255)
Q Consensus 133 ~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~-~~~~~~dGIlGLg~~~~S----- 206 (255)
++ ....|.|.+.|++|+ +.|.+++|+|+|+ +..++++.|||++..... +.....+||||||++.++
T Consensus 63 --T~-~~~~~~~~i~Yg~Gs-~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 134 (324)
T 1am5_A 63 --TY-VETGKTVDLTYGTGG-MRGILGQDTVSVG----GGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAV 134 (324)
T ss_dssp --TC-EEEEEEEEEECSSCE-EEEEEEEEEEESS----SSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCC
T ss_pred --Ce-EeCCcEEEEEECCCC-eEEEEEECceeEC----CcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCC
Confidence 11 124689999999995 6999999999996 466789999999986321 234578999999998764
Q ss_pred -hHHHhhhcCCc-cceEEEecCCC--CCeEEEECCCCC--CCCCeEEEECcc
Q 025265 207 -IVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSS 252 (255)
Q Consensus 207 -l~~ql~~~g~i-~~~FS~cL~~~--~~G~l~fG~~~~--~~~~l~~tPli~ 252 (255)
+..+|.++++| +++||+||.+. .+|.|+||++|. +.++++|+||+.
T Consensus 135 ~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~ 186 (324)
T 1am5_A 135 PVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTA 186 (324)
T ss_dssp CHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEE
T ss_pred chHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCC
Confidence 56789999999 89999999863 489999999975 578999999975
No 13
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=99.98 E-value=2.1e-32 Score=246.64 Aligned_cols=172 Identities=17% Similarity=0.347 Sum_probs=140.8
Q ss_pred eEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCC--CCCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 025265 54 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPC--VRCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (255)
Q Consensus 54 ~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C--~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~ 131 (255)
..+||.+. .+.+|+++|.||||+|++.|++||||+++||+|. +| ..|. .++.|+|++|+
T Consensus 4 ~~~~l~n~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss-------------- 64 (323)
T 3cms_A 4 ASVPLTNY--LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI-YCKSNACK--NHQRFDPRKSS-------------- 64 (323)
T ss_dssp EEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT--------------
T ss_pred ceeeeEec--cCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC-CCCccccc--CCCCCCCccCC--------------
Confidence 34677653 3789999999999999999999999999999999 89 4687 46889998874
Q ss_pred CCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc----
Q 025265 132 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS---- 206 (255)
Q Consensus 132 ~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~-~~~~~~dGIlGLg~~~~S---- 206 (255)
++ ....|.|.+.|++|+ +.|.+++|+|+|+ +..++++.|||++..... +.....+||||||++.++
T Consensus 65 ---T~-~~~~~~~~i~Yg~Gs-~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 135 (323)
T 3cms_A 65 ---TF-QNLGKPLSIHYGTGS-MQGILGYDTVTVS----NIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYS 135 (323)
T ss_dssp ---TC-EEEEEEEEEEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTC
T ss_pred ---Ce-EECCcEEEEEeCCCC-eEEEEEEEEEEEC----CeEEeccEEEEEEecccccccccCCceEEecCcchhhccCC
Confidence 11 124789999999995 8999999999996 466789999999886221 122468999999998754
Q ss_pred --hHHHhhhcCCc-cceEEEecCCC-CCeEEEECCCCC--CCCCeEEEECccC
Q 025265 207 --IVSQLHSQKLI-RNVVGHCLSGG-GGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 207 --l~~ql~~~g~i-~~~FS~cL~~~-~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+..+|.++++| +++||+||.+. ..|.|+||++|. +.++++|+||+.+
T Consensus 136 ~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 188 (323)
T 3cms_A 136 IPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ 188 (323)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB
T ss_pred CCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC
Confidence 67789999999 89999999863 459999999975 5689999999864
No 14
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=99.97 E-value=3.5e-32 Score=246.26 Aligned_cols=173 Identities=19% Similarity=0.327 Sum_probs=143.1
Q ss_pred CceEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC----CCCCCCCCCCCCCCCCCCCCCccccc
Q 025265 52 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV----RCVEAPHPLYRPSNDLVPCEDPICAS 127 (255)
Q Consensus 52 s~~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~----~C~~~~~~~f~p~~S~v~C~s~~C~~ 127 (255)
....+||.+.. +.+|+++|.||||+|++.|++||||+++||+|. .|. .|. .++.|+|++|+
T Consensus 6 ~~~~~~l~n~~--d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~~C~--~~~~y~~~~Ss---------- 70 (341)
T 3k1w_A 6 TTSSVILTNYM--DTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSS---------- 70 (341)
T ss_dssp BCEEEEEEEET--TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTCHHHH--TSCCBCGGGCT----------
T ss_pred CCccccceEcc--CCEEEEEEEEcCCCcEEEEEEeCCCcceEEccC-CCCCCCCccc--CCCCCCCCcCc----------
Confidence 44567887643 789999999999999999999999999999999 897 576 46899998874
Q ss_pred CCCCCCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc
Q 025265 128 LHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS 206 (255)
Q Consensus 128 ~~~~~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~-~~~~~~dGIlGLg~~~~S 206 (255)
++ ....|.|.+.|++|+ +.|.+++|+|+|+ +..+ ++.|||++..... +.....+||||||++.++
T Consensus 71 -------T~-~~~~~~~~i~Yg~gs-~~G~~~~D~v~ig----~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 136 (341)
T 3k1w_A 71 -------SY-KHNGTELTLRYSTGT-VSGFLSQDIITVG----GITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQA 136 (341)
T ss_dssp -------TC-EEEEEEEEEEETTEE-EEEEEEEEEEEET----TEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGC
T ss_pred -------Ce-eECCCEEEEEECCcE-EEEEEEEEEEEEC----Ccee-eEEEEEEEEccccccccCCcceEEECCchhhc
Confidence 11 124789999999995 8999999999996 4566 9999999886321 234568999999998765
Q ss_pred ------hHHHhhhcCCc-cceEEEecCCCC------CeEEEECCCCC--CCCCeEEEECccC
Q 025265 207 ------IVSQLHSQKLI-RNVVGHCLSGGG------GGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 207 ------l~~ql~~~g~i-~~~FS~cL~~~~------~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
++.+|.++|+| +++||+||.+.. +|.|+||++|. +.++++|+||+..
T Consensus 137 ~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 198 (341)
T 3k1w_A 137 IGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT 198 (341)
T ss_dssp GGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC
Confidence 67899999999 899999998643 89999999975 5789999999753
No 15
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=99.97 E-value=6.2e-32 Score=244.61 Aligned_cols=168 Identities=20% Similarity=0.300 Sum_probs=138.6
Q ss_pred ceEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCC-CCCC---------CCCCCCCCCCCCCCCCCCCC
Q 025265 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDA-PCVR---------CVEAPHPLYRPSNDLVPCED 122 (255)
Q Consensus 53 ~~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~-~C~~---------C~~~~~~~f~p~~S~v~C~s 122 (255)
.+.+|+.+. +.+|+++|.||||+|++.|+|||||+++||+|.. +|.. |. .++.|+|++|+
T Consensus 2 ~~~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~--~~~~y~~~~Ss----- 71 (334)
T 1j71_A 2 DVPTTLINE---GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCK--QEGTFDPSSSS----- 71 (334)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGG--SSCCBCGGGCT-----
T ss_pred ceeEEEecC---CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCccccccccccc--CCCcCCcccCC-----
Confidence 467788654 5799999999999999999999999999998531 3543 43 46778887763
Q ss_pred cccccCCCCCCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeCC
Q 025265 123 PICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGK 202 (255)
Q Consensus 123 ~~C~~~~~~~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~~~~~~~dGIlGLg~ 202 (255)
++ ....|.|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++... ..+||||||+
T Consensus 72 ------------T~-~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~------~~~GilGLg~ 128 (334)
T 1j71_A 72 ------------SA-QNLNQDFSIEYGDLTSSQGSFYKDTVGFG----GISIKNQQFADVTTTS------VDQGIMGIGF 128 (334)
T ss_dssp ------------TC-EEEEEEEEEEBTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEES------SSSCEEECSC
T ss_pred ------------Cc-ccCCCceEEEECCCCEEEEEEEEEEEEEC----CEEEccEEEEEEEecC------CCccEEEEcC
Confidence 11 12478999999999888999999999996 4567899999998752 5799999999
Q ss_pred CCC--------chHHHhhhcCCc-cceEEEecCC--CCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 203 GKS--------SIVSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 203 ~~~--------Sl~~ql~~~g~i-~~~FS~cL~~--~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
..+ +++.||.++++| +++||+||.+ ..+|.|+||++|. +.++++|+||+.+
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 192 (334)
T 1j71_A 129 TADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS 192 (334)
T ss_dssp GGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS
T ss_pred CcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC
Confidence 865 788999999999 7999999985 3579999999975 4689999999875
No 16
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=99.97 E-value=2.1e-31 Score=241.18 Aligned_cols=167 Identities=22% Similarity=0.316 Sum_probs=141.3
Q ss_pred ceEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEe-----cCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 025265 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQ-----CDAPCVRCVEAPHPLYRPSNDLVPCEDPICAS 127 (255)
Q Consensus 53 ~~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~-----c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~ 127 (255)
++.+|+..+ +++|+++|.||||+|++.|++||||+++||+ |. +|..|. .++.|+|++|+.
T Consensus 2 ~i~~~l~~~---~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~-~~~~C~--~~~~y~~~~SsT--------- 66 (339)
T 3fv3_A 2 SISLSLINE---GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCG-KGVDCK--SSGTFTPSSSSS--------- 66 (339)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEEC-TTCCTT--TTCCBCGGGCTT---------
T ss_pred ceeeEEEcC---CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCC-CCCCCC--CCCcCCCccCcc---------
Confidence 356788654 4689999999999999999999999999998 76 666787 468999988741
Q ss_pred CCCCCCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeCCCCCc-
Q 025265 128 LHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSS- 206 (255)
Q Consensus 128 ~~~~~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~~~~~~~dGIlGLg~~~~S- 206 (255)
. ....|.|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++... ..+||||||+..++
T Consensus 67 --------~-~~~~~~~~i~Yg~gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~------~~~GilGLg~~~~~~ 127 (339)
T 3fv3_A 67 --------Y-KNLGAAFTIRYGDGSTSQGTWGKDTVTIN----GVSITGQQIADVTQTS------VDQGILGIGYTSNEA 127 (339)
T ss_dssp --------C-EEEEEEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEES------SSSCEEECSCGGGCC
T ss_pred --------e-eeCCceEEEEECCCceEEEEEEEEEEEEC----CEEECceEEEEEEecC------CCceeEEecCccccc
Confidence 0 12468999999999999999999999996 4677899999998863 26999999998754
Q ss_pred ---------------hHHHhhhcCCc-cceEEEecCCC--CCeEEEECCCCC--CCCCeEEEECccC
Q 025265 207 ---------------IVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 207 ---------------l~~ql~~~g~i-~~~FS~cL~~~--~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
++.||.++|+| +++||+||.+. .+|.|+|||+|. +.++++|+||+.+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 194 (339)
T 3fv3_A 128 VYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS 194 (339)
T ss_dssp CBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS
T ss_pred cccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC
Confidence 78899999999 89999999863 479999999875 5789999999875
No 17
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=99.97 E-value=4.5e-32 Score=244.94 Aligned_cols=171 Identities=20% Similarity=0.378 Sum_probs=140.3
Q ss_pred EEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCC--CCCCCCCCCCCCCCCCCCCCcccccCCCCC
Q 025265 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVR--CVEAPHPLYRPSNDLVPCEDPICASLHAPG 132 (255)
Q Consensus 55 ~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~--C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~ 132 (255)
.+|+.+. .+.+|+++|.||||+|++.|++||||+++||+|. +|.. |. .++.|+|++|+
T Consensus 4 ~~~l~~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss--------------- 63 (329)
T 1dpj_A 4 DVPLTNY--LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN-ECGSLACF--LHSKYDHEASS--------------- 63 (329)
T ss_dssp EEECEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT---------------
T ss_pred ceeeeec--CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecC-CCCCcccC--CcCcCCcccCc---------------
Confidence 4566543 3789999999999999999999999999999999 8986 76 46789998774
Q ss_pred CCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCC-CCCCCCcceEEeeCCCCCch----
Q 025265 133 HHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVP-GASYHPLDGILGLGKGKSSI---- 207 (255)
Q Consensus 133 ~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~-~~~~~~~dGIlGLg~~~~Sl---- 207 (255)
++ ....|.|.+.|++| ++.|.+++|+|+|+ +..++++.|||++.... .+.....+||||||+..+++
T Consensus 64 --T~-~~~~~~~~i~Yg~G-s~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~ 135 (329)
T 1dpj_A 64 --SY-KANGTEFAIQYGTG-SLEGYISQDTLSIG----DLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVV 135 (329)
T ss_dssp --TC-EEEEEEEEEEETTE-EEEEEEEEEEEEET----TEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCC
T ss_pred --Ce-EECCcEEEEEECCc-eEEEEEEEEEEEEC----CeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCC
Confidence 11 12578999999999 79999999999996 46678999999988522 12345689999999988764
Q ss_pred --HHHhhhcCCc-cceEEEecCCC-----CCeEEEECCCCC--CCCCeEEEECccC
Q 025265 208 --VSQLHSQKLI-RNVVGHCLSGG-----GGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 208 --~~ql~~~g~i-~~~FS~cL~~~-----~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
..+|.++|+| +++||+||.+. .+|.|+||++|. +.++++|+||+.+
T Consensus 136 ~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 191 (329)
T 1dpj_A 136 PPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK 191 (329)
T ss_dssp CHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB
T ss_pred CHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC
Confidence 4688999999 89999999752 379999999975 5689999999754
No 18
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=99.97 E-value=1.7e-31 Score=242.32 Aligned_cols=168 Identities=20% Similarity=0.348 Sum_probs=138.2
Q ss_pred ceEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCC-CCC---------CCCCCCCCCCCCCCCCCCCCC
Q 025265 53 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDA-PCV---------RCVEAPHPLYRPSNDLVPCED 122 (255)
Q Consensus 53 ~~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~-~C~---------~C~~~~~~~f~p~~S~v~C~s 122 (255)
.+.+|+.+. +.+|+++|.||||+|++.|+|||||+++||+|.. +|. .|. .++.|+|++|+
T Consensus 2 ~v~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~--~~~~y~~~~Ss----- 71 (342)
T 2qzx_A 2 PVAVTLHNE---AITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCK--SAGSYSPASSR----- 71 (342)
T ss_dssp CEEEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGG--TTCCBCGGGCT-----
T ss_pred ceeEEEecC---CeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCcccccc--CCCcCCcccCC-----
Confidence 356777653 6799999999999999999999999999998531 354 343 46788887764
Q ss_pred cccccCCCCCCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeCC
Q 025265 123 PICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGK 202 (255)
Q Consensus 123 ~~C~~~~~~~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~~~~~~~dGIlGLg~ 202 (255)
++ ....|.|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++... ..+||||||+
T Consensus 72 ------------T~-~~~~~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~------~~~GilGLg~ 128 (342)
T 2qzx_A 72 ------------TS-QNLNTRFDIKYGDGSYAKGKLYKDTVGIG----GVSVRDQLFANVWSTS------ARKGILGIGF 128 (342)
T ss_dssp ------------TC-EEEEEEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEEC------SSSCEEECSC
T ss_pred ------------Cc-ccCCCcEEEEeCCCCeEEEEEEEEEEEEC----CEEecceEEEEEEecC------CCcCEEEEcc
Confidence 11 12478999999999888999999999996 4567899999998752 5799999999
Q ss_pred CCC--------chHHHhhhcCCc-cceEEEecCC--CCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 203 GKS--------SIVSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 203 ~~~--------Sl~~ql~~~g~i-~~~FS~cL~~--~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
..+ +++.||.++++| +++||+||.+ ..+|.|+||++|. +.++++|+||+.+
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 192 (342)
T 2qzx_A 129 QSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE 192 (342)
T ss_dssp GGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS
T ss_pred ccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC
Confidence 865 788999999999 7999999985 3579999999974 5789999999875
No 19
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=99.97 E-value=4.8e-32 Score=243.57 Aligned_cols=170 Identities=21% Similarity=0.392 Sum_probs=137.5
Q ss_pred EeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q 025265 56 FQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAPGH 133 (255)
Q Consensus 56 ~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~--~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~ 133 (255)
.||.+. .+.+|+++|+||||+|++.|++||||+++||+|. +|. .|. .++.|+|++|+
T Consensus 3 ~~l~n~--~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss---------------- 61 (320)
T 4aa9_A 3 EPLTSY--LDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI-YCKSNVCK--NHHRFDPRKSS---------------- 61 (320)
T ss_dssp -----C--CCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT----------------
T ss_pred ccceec--cCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC-CCCccccC--CCCCCCCCCCc----------------
Confidence 355442 3789999999999999999999999999999999 898 465 46899998874
Q ss_pred CCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCC------c
Q 025265 134 HNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS------S 206 (255)
Q Consensus 134 ~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~-~~~~~~dGIlGLg~~~~------S 206 (255)
++ ....|.|.+.|++|+ +.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+..+ +
T Consensus 62 -T~-~~~~~~~~i~Yg~gs-~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 134 (320)
T 4aa9_A 62 -TF-RNLGKPLSIHYGTGS-MEGFLGYDTVTVS----NIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVP 134 (320)
T ss_dssp -TC-EEEEEEEEEEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCC
T ss_pred -Ce-EcCCcEEEEEECCcE-EEEEEEEEEEEEC----CEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCC
Confidence 11 124689999999995 8999999999996 467789999999886321 22356899999999765 4
Q ss_pred hHHHhhhcCCc-cceEEEecCC-CCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 207 IVSQLHSQKLI-RNVVGHCLSG-GGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 207 l~~ql~~~g~i-~~~FS~cL~~-~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+..+|.++|+| +++||+||.+ ..+|.|+||++|. +.++++|+|++..
T Consensus 135 ~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 185 (320)
T 4aa9_A 135 VFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ 185 (320)
T ss_dssp HHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB
T ss_pred HHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC
Confidence 67899999999 8999999997 3689999999985 5789999999753
No 20
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=99.97 E-value=5.5e-32 Score=244.34 Aligned_cols=169 Identities=22% Similarity=0.414 Sum_probs=139.2
Q ss_pred EeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q 025265 56 FQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAPGH 133 (255)
Q Consensus 56 ~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~--~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~ 133 (255)
+||. +.+.+|+++|.||||+|++.|++||||+++||+|. +|. .|. .++.|+|++|+
T Consensus 5 ~~l~---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss---------------- 62 (329)
T 1htr_B 5 EPMA---YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV-YCQSQACT--SHSRFNPSESS---------------- 62 (329)
T ss_dssp CGGG---GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT----------------
T ss_pred eeeE---EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCCcccC--CCCcCCCccCC----------------
Confidence 4554 34789999999999999999999999999999999 897 476 36889998874
Q ss_pred CCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc------
Q 025265 134 HNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS------ 206 (255)
Q Consensus 134 ~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~-~~~~~~dGIlGLg~~~~S------ 206 (255)
++ ....|.|.+.|++|+ +.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+..++
T Consensus 63 -T~-~~~~~~~~i~Yg~gs-~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 135 (329)
T 1htr_B 63 -TY-STNGQTFSLQYGSGS-LTGFFGYDTLTVQ----SIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATT 135 (329)
T ss_dssp -TC-EEEEEEEEEEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCS
T ss_pred -Ce-EECCcEEEEEeCCCC-eEEEEEeeeEEEc----ceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCC
Confidence 11 124689999999995 6999999999995 466789999999875221 223578999999998765
Q ss_pred hHHHhhhcCCc-cceEEEecCCCC---CeEEEECCCCC--CCCCeEEEECccC
Q 025265 207 IVSQLHSQKLI-RNVVGHCLSGGG---GGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 207 l~~ql~~~g~i-~~~FS~cL~~~~---~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+..+|.++++| +++||+||.+.. +|.|+||++|. +.++++|+||+.+
T Consensus 136 ~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 188 (329)
T 1htr_B 136 AMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE 188 (329)
T ss_dssp HHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS
T ss_pred HHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC
Confidence 67789999999 899999998642 79999999975 5689999999764
No 21
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=99.97 E-value=4e-31 Score=239.40 Aligned_cols=166 Identities=24% Similarity=0.355 Sum_probs=137.8
Q ss_pred eEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCC--CC---------CCCCCCCCCCCCCCCCCCCCC
Q 025265 54 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAP--CV---------RCVEAPHPLYRPSNDLVPCED 122 (255)
Q Consensus 54 ~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~--C~---------~C~~~~~~~f~p~~S~v~C~s 122 (255)
+.+|+..+ +++|+++|.||||+|++.|++||||+++||+|. . |. .|. .++.|+|++|+.
T Consensus 3 v~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~~~C~~~~~~~~~~~C~--~~~~y~~~~SsT---- 72 (342)
T 3pvk_A 3 VPVTLHNE---QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDV-NVDCQVTYSDQTADFCK--QKGTYDPSGSSA---- 72 (342)
T ss_dssp EEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGG--TTCCBCGGGCTT----
T ss_pred cceEEecC---CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcC-CCCCcccccccccCCCC--CCCcCCCccCcc----
Confidence 55677653 579999999999999999999999999999854 3 42 454 367899887641
Q ss_pred cccccCCCCCCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeCC
Q 025265 123 PICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGK 202 (255)
Q Consensus 123 ~~C~~~~~~~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~~~~~~~dGIlGLg~ 202 (255)
+ ....|.|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++... ..+||||||+
T Consensus 73 -------------~-~~~~~~~~i~Yg~gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~------~~~GilGLg~ 128 (342)
T 3pvk_A 73 -------------S-QDLNTPFKIGYGDGSSSQGTLYKDTVGFG----GVSIKNQVLADVDSTS------IDQGILGVGY 128 (342)
T ss_dssp -------------C-EEEEEEEEEECSSSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEES------SSSCEEECSC
T ss_pred -------------e-eecCCeEEEEecCCCeEEEEEEEEEEEEC----CEEecceEEEEEEccC------CCccEEEecC
Confidence 0 12468999999999889999999999996 4677899999998762 5799999999
Q ss_pred CC-------CchHHHhhhcCCc-cceEEEecCC--CCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 203 GK-------SSIVSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 203 ~~-------~Sl~~ql~~~g~i-~~~FS~cL~~--~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
.. .+++.||.++++| +++||+||.+ ..+|.|+|||+|. +.++++|+||+.+
T Consensus 129 ~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 191 (342)
T 3pvk_A 129 KTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD 191 (342)
T ss_dssp GGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS
T ss_pred ccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc
Confidence 87 4689999999999 7999999985 3579999999875 5789999999875
No 22
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=99.97 E-value=2.5e-31 Score=250.40 Aligned_cols=170 Identities=22% Similarity=0.314 Sum_probs=139.9
Q ss_pred eEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 025265 54 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (255)
Q Consensus 54 ~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~--~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~ 131 (255)
..+|+.+. .+.+|+++|+||||+|++.|++||||+++||+|. +|. .|. .++.|+|++|+
T Consensus 128 ~~~~L~n~--~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~-~C~~~~C~--~~~~ydps~Ss-------------- 188 (453)
T 2bju_A 128 DNIELVDF--QNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV-KCTTAGCL--TKHLYDSSKSR-------------- 188 (453)
T ss_dssp EEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSTTGG--GSCCBCGGGCT--------------
T ss_pred CceeeEec--CCCEEEEEEEECCCCeEEEEEEECCCcceEEecc-CCCccccC--CCCcCCCccCC--------------
Confidence 45777642 4789999999999999999999999999999999 897 676 47899998774
Q ss_pred CCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecC--CC-CCCCCcceEEeeCCCCCc--
Q 025265 132 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQV--PG-ASYHPLDGILGLGKGKSS-- 206 (255)
Q Consensus 132 ~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~--~~-~~~~~~dGIlGLg~~~~S-- 206 (255)
++ ....|.|.+.|++|+ +.|.+++|+|+|+ +..++ +.|||++... .. +.....+||||||++.++
T Consensus 189 ---T~-~~~~~~~~i~YgdGs-~~G~~~~Dtv~ig----~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~ 258 (453)
T 2bju_A 189 ---TY-EKDGTKVEMNYVSGT-VSGFFSKDLVTVG----NLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIG 258 (453)
T ss_dssp ---TC-EEEEEEEEEECSSSE-EEEEEEEEEEEET----TEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTT
T ss_pred ---ce-eECCcEEEEEcCCCC-eEEEEEEEEEEEe----CcEEE-EEEEEEEEecccCccccccCCceeEeccCCccccc
Confidence 11 124789999999995 8999999999996 45677 9999999863 11 123568999999998654
Q ss_pred ----hHHHhhhcCCc-cceEEEecCCC--CCeEEEECCCCC--CCCCeEEEECcc
Q 025265 207 ----IVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSS 252 (255)
Q Consensus 207 ----l~~ql~~~g~i-~~~FS~cL~~~--~~G~l~fG~~~~--~~~~l~~tPli~ 252 (255)
+..+|.++|+| +++||+||.+. .+|.|+|||+|. +.++++|+||+.
T Consensus 259 ~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~ 313 (453)
T 2bju_A 259 SVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNH 313 (453)
T ss_dssp CCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEE
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCC
Confidence 56789999999 89999999863 589999999985 578999999975
No 23
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=99.97 E-value=1.5e-31 Score=246.23 Aligned_cols=170 Identities=22% Similarity=0.316 Sum_probs=140.2
Q ss_pred eEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 025265 54 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAP 131 (255)
Q Consensus 54 ~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~--~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~ 131 (255)
..+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|+
T Consensus 52 ~~~pl~~~--~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss-------------- 112 (375)
T 1miq_A 52 DVIELDDV--ANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK-KCNSSGCS--IKNLYDSSKSK-------------- 112 (375)
T ss_dssp BCCCGGGT--BCEEEECCCEETTTTEECCEEEETTCCCEEEEBT-TCCSSGGG--GSCCBCGGGCT--------------
T ss_pred ceEEcccC--CCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC-CCCccccc--CCCcCCCccCC--------------
Confidence 34677653 4789999999999999999999999999999999 896 676 46889998774
Q ss_pred CCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEe----cCCCCCCCCcceEEeeCCCCCc-
Q 025265 132 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYN----QVPGASYHPLDGILGLGKGKSS- 206 (255)
Q Consensus 132 ~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~----~~~~~~~~~~dGIlGLg~~~~S- 206 (255)
++ ....|.|.+.|++|+ +.|.+++|+|+|+ +..+++ .|||++. .. .+.....+||||||++.++
T Consensus 113 ---T~-~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~ 181 (375)
T 1miq_A 113 ---SY-EKDGTKVDITYGSGT-VKGFFSKDLVTLG----HLSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSI 181 (375)
T ss_dssp ---TC-EEEEEEEEEEETTEE-EEEEEEEEEEEET----TEEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTC
T ss_pred ---ce-EECCcEEEEEeCCCe-EEEEEEEEEEEEc----CceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccc
Confidence 11 124689999999995 8999999999996 456778 9999998 42 2223568999999998764
Q ss_pred -----hHHHhhhcCCc-cceEEEecCCC--CCeEEEECCCCC--CCCCeEEEECccC
Q 025265 207 -----IVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 207 -----l~~ql~~~g~i-~~~FS~cL~~~--~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+..+|.++|+| +++||+||.+. .+|.|+|||+|. +.++++|+||+..
T Consensus 182 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 238 (375)
T 1miq_A 182 GSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD 238 (375)
T ss_dssp SSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS
T ss_pred cCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC
Confidence 57789999999 89999999864 479999999985 5789999999753
No 24
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=99.97 E-value=1.1e-30 Score=235.59 Aligned_cols=163 Identities=22% Similarity=0.305 Sum_probs=135.6
Q ss_pred CCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCce
Q 025265 64 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 143 (255)
Q Consensus 64 ~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~~~C~~~~~c~ 143 (255)
.+.+|+++|.|| +|++.|++||||+++||+|. +|..|..+.++.|+|++|+ + ....|.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~-----------------~~~~~~ 69 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSD-ELPSSEQTGHDLYTPSSSA--T-----------------KLSGYS 69 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECT-TSCHHHHTTSCCCBCCSSC--E-----------------ECTTCB
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeC-CCCccccCCCCCCCchhcC--C-----------------ccCCCE
Confidence 367999999999 89999999999999999999 8987765678899998774 1 114689
Q ss_pred eeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCC-CCCCcceEEeeCCCCCc---------hHHHhhh
Q 025265 144 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSS---------IVSQLHS 213 (255)
Q Consensus 144 ~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~~-~~~~~dGIlGLg~~~~S---------l~~ql~~ 213 (255)
|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++.....+ .....+||||||++.++ +..||.+
T Consensus 70 ~~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~ 145 (325)
T 1ibq_A 70 WDISYGDGSSASGDVYRDTVTVG----GVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKS 145 (325)
T ss_dssp EEEECSSSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGG
T ss_pred EEEEeCCCCEEEEEEEEeEEEEC----CEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHH
Confidence 99999999779999999999996 4667899999998863211 22478999999998765 4578887
Q ss_pred cCCccceEEEecCCCCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 214 QKLIRNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 214 ~g~i~~~FS~cL~~~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+ +-+++||+||.+..+|.|+||++|. +.++++|+||+.+
T Consensus 146 ~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 186 (325)
T 1ibq_A 146 Q-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSS 186 (325)
T ss_dssp G-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCT
T ss_pred h-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCC
Confidence 6 3389999999976689999999975 5789999999853
No 25
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=99.97 E-value=4.9e-31 Score=250.00 Aligned_cols=171 Identities=19% Similarity=0.285 Sum_probs=139.6
Q ss_pred eEEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC---CCCCCCCCCCCCCCCCCCCCCcccccCCC
Q 025265 54 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV---RCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (255)
Q Consensus 54 ~~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~---~C~~~~~~~f~p~~S~v~C~s~~C~~~~~ 130 (255)
..+|+.+. .+.+|+++|+||||+|++.|+|||||+++||+|. .|. .|.. ++.|+|++|+
T Consensus 42 ~~~~l~n~--~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~-~C~~~~~C~~--~~~y~~~~Ss------------- 103 (478)
T 1qdm_A 42 DIVALKNY--MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA-KCYFSIACYL--HSRYKAGASS------------- 103 (478)
T ss_dssp CSGGGCCG--GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCSCGGGGG--SCCBCGGGCT-------------
T ss_pred ceEEeEec--cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC-CCCCCccccC--CCCCCcccCC-------------
Confidence 44666543 3789999999999999999999999999999999 895 6874 6789998774
Q ss_pred CCCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCch--
Q 025265 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSSI-- 207 (255)
Q Consensus 131 ~~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~-~~~~~~dGIlGLg~~~~Sl-- 207 (255)
++ ....|.|.+.|++|+ ++|.+++|+|+|+ +..++++.|||++..... +...+.|||||||++.+|+
T Consensus 104 ----T~-~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~ 173 (478)
T 1qdm_A 104 ----TY-KKNGKPAAIQYGTGS-IAGYFSEDSVTVG----DLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGK 173 (478)
T ss_dssp ----TC-BCCCCEEEEEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGG
T ss_pred ----Ce-eeCCcEEEEEcCCCC-eEEEEEEEEEEEC----CeEECCEEEEEEEecCCcccccccccceecccccccccCC
Confidence 11 124689999999995 8999999999996 466789999999875221 2235689999999998764
Q ss_pred ----HHHhhhcCCc-cceEEEecCCC----CCeEEEECCCCC--CCCCeEEEECcc
Q 025265 208 ----VSQLHSQKLI-RNVVGHCLSGG----GGGFLFFGDDLY--DSSRVVWTSMSS 252 (255)
Q Consensus 208 ----~~ql~~~g~i-~~~FS~cL~~~----~~G~l~fG~~~~--~~~~l~~tPli~ 252 (255)
..+|.++|+| +++||+||.+. .+|.|+||++|. +.++++|+||+.
T Consensus 174 ~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~ 229 (478)
T 1qdm_A 174 AVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQ 229 (478)
T ss_dssp CCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEE
T ss_pred CCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccC
Confidence 5678999999 89999999863 489999999975 468999999875
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=99.97 E-value=4.8e-30 Score=232.63 Aligned_cols=157 Identities=25% Similarity=0.402 Sum_probs=131.1
Q ss_pred EEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCC
Q 025265 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHH 134 (255)
Q Consensus 55 ~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~~ 134 (255)
.+||.+. +.+|+++|.||||+|++.|+|||||+++||+|. +.|+|++|.
T Consensus 4 ~~~l~n~---~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss----------------- 52 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTS----------------- 52 (340)
T ss_dssp EEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTC-----------------
T ss_pred cEeeecc---CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCc-----------------
Confidence 3666543 458999999999999999999999999999875 468887663
Q ss_pred CCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeCCCCCc--------
Q 025265 135 NCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSS-------- 206 (255)
Q Consensus 135 ~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~~~~~~~dGIlGLg~~~~S-------- 206 (255)
....|.|.+.|++|+ ++|.+++|+|+|+ +..++++.|||++... + +...+||||||+..++
T Consensus 53 ---~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~~g----~~~v~~~~fg~~~~~~-~--~~~~~GilGLg~~~~s~~~~~~~~ 121 (340)
T 1wkr_A 53 ---SATSDKVSVTYGSGS-FSGTEYTDTVTLG----SLTIPKQSIGVASRDS-G--FDGVDGILGVGPVDLTVGTLSPHT 121 (340)
T ss_dssp ---EEEEEEEEEECSSCE-EEEEEEEEEEEET----TEEEEEEEEEEEEEEE-S--CTTCSEEEECSCGGGGTTSEESCT
T ss_pred ---cccCceEEEEECCcE-EEEEEEEEEEEEC----CEEEcceEEEEEEccC-C--CcCCCcEEECCccccccccccccc
Confidence 114689999999995 8999999999995 4677899999999863 3 3468999999998764
Q ss_pred ------hHHHhhhcCCc-cceEEEecCCC-----CCeEEEECCCCC--CCCCeEEEECccC
Q 025265 207 ------IVSQLHSQKLI-RNVVGHCLSGG-----GGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 207 ------l~~ql~~~g~i-~~~FS~cL~~~-----~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
++.+|.++++| +++||+||.+. .+|.|+||++|. +.++++|+||+.+
T Consensus 122 ~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 182 (340)
T 1wkr_A 122 STSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITST 182 (340)
T ss_dssp TCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSS
T ss_pred cccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccC
Confidence 46789999999 79999999842 479999999975 6789999999875
No 27
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=99.97 E-value=1e-30 Score=235.78 Aligned_cols=162 Identities=20% Similarity=0.277 Sum_probs=134.2
Q ss_pred CeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCcee
Q 025265 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (255)
Q Consensus 65 ~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~~~C~~~~~c~~ 144 (255)
+.+|+++|.|| +|++.|+|||||+++||+|. +|..|..+.++.|+|++|+ + ..+.|.|
T Consensus 14 ~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~-----------------~~~~~~~ 71 (323)
T 1izd_A 14 DEEYITQVTVG--DDTLGLDFDTGSADLWVFSS-QTPSSERSGHDYYTPGSSA--Q-----------------KIDGATW 71 (323)
T ss_dssp GCCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTCCCBCCCTTC--E-----------------EEEEEEE
T ss_pred CCEEEEEEEEC--CEEEEEEEcCCCcceEEecC-CCCcccccCCCCCCccccC--C-----------------ccCCCeE
Confidence 56899999999 89999999999999999999 8987765568899998774 1 1146899
Q ss_pred eeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCC-CCCCcceEEeeCCCCCc---------hHHHhhhc
Q 025265 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSS---------IVSQLHSQ 214 (255)
Q Consensus 145 ~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~~-~~~~~dGIlGLg~~~~S---------l~~ql~~~ 214 (255)
.+.|++|+.+.|.+++|+|+|+ +..++++.|||++.....+ .....+||||||++.++ +..+|.++
T Consensus 72 ~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~ 147 (323)
T 1izd_A 72 SISYGDGSSASGDVYKDKVTVG----GVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS 147 (323)
T ss_dssp EEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG
T ss_pred EEEcCCCCeEEEEEEEEEEEEC----CEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh
Confidence 9999999779999999999996 4667899999999863211 12568999999998765 45788876
Q ss_pred CCccceEEEecCCCCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 215 KLIRNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 215 g~i~~~FS~cL~~~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+-+++||+||.++.+|.|+||++|. +.++++|+||+.+
T Consensus 148 -i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 187 (323)
T 1izd_A 148 -LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNS 187 (323)
T ss_dssp -SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCT
T ss_pred -ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCC
Confidence 3389999999976789999999975 4689999999853
No 28
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=99.97 E-value=1.3e-30 Score=245.47 Aligned_cols=169 Identities=17% Similarity=0.226 Sum_probs=139.7
Q ss_pred EEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCCC
Q 025265 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAPG 132 (255)
Q Consensus 55 ~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~--~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~ 132 (255)
.+||.+. .+.+|+++|.||||||++.|++||||+++||+|. .|. .|. .++.|+|++|+
T Consensus 128 ~~pL~n~--~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~-~C~s~~C~--~~~~ydps~Ss--------------- 187 (451)
T 3qvc_A 128 NVELKDL--ANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI-KCTSESCE--SKNHYDSSKSK--------------- 187 (451)
T ss_dssp CCCGGGG--BCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT-TCCSGGGT--TSCCBCGGGCT---------------
T ss_pred ccceeec--CCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCccccC--CCCCCCCCCCc---------------
Confidence 3566543 3789999999999999999999999999999999 894 686 46899998874
Q ss_pred CCCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEe----cCCCCCCCCcceEEeeCCCCC---
Q 025265 133 HHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYN----QVPGASYHPLDGILGLGKGKS--- 205 (255)
Q Consensus 133 ~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~----~~~~~~~~~~dGIlGLg~~~~--- 205 (255)
++ ....|.|.+.|++|+ +.|.+++|+|+|+ +..++ +.|||++. .. ++.....+||||||++.+
T Consensus 188 --T~-~~~~~~f~i~YgdGs-~~G~~~~Dtv~ig----g~~v~-~~Fg~a~~t~~~~~-~f~~~~~dGILGLg~~~~s~~ 257 (451)
T 3qvc_A 188 --TY-EKDDTPVKLTSKAGT-ISGIFSKDLVTIG----KLSVP-YKFIEMTEIVGFEP-FYSESDVDGVFGLGWKDLSIG 257 (451)
T ss_dssp --TC-EEEEEEEEEECSSEE-EEEEEEEEEEEET----TEEEE-EEEEEEEEEEECTT-HHHHSCCCEEEECSSBCSSSS
T ss_pred --cc-ccCCCEEEEEECCCE-EEEEEEEEEEEEC----CEEEE-EEEEEEEeccccCC-CccCCCCCEEEecCCCccccc
Confidence 11 124689999999996 9999999999996 45677 99999988 42 222356899999999865
Q ss_pred ---chHHHhhhcCCc-cceEEEecCCC--CCeEEEECCCCC--CCCCeEEEECccC
Q 025265 206 ---SIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 206 ---Sl~~ql~~~g~i-~~~FS~cL~~~--~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+++.+|.++|+| +++||+||.+. .+|.|+|||+|. +.++++|+|++..
T Consensus 258 ~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~ 313 (451)
T 3qvc_A 258 SIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD 313 (451)
T ss_dssp CCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST
T ss_pred CCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC
Confidence 477899999999 89999999963 479999999985 5789999999853
No 29
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=99.97 E-value=9.2e-31 Score=236.04 Aligned_cols=162 Identities=20% Similarity=0.265 Sum_probs=134.2
Q ss_pred CeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCcee
Q 025265 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (255)
Q Consensus 65 ~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~~~C~~~~~c~~ 144 (255)
+.+|+++|.|| +|++.|+|||||+++||+|. +|..|..+.++.|+|++|+ . ....|.|
T Consensus 14 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~-----------------~~~~~~~ 71 (323)
T 1bxo_A 14 DEEYITPVTIG--GTTLNLNFDTGSADLWVFST-ELPASQQSGHSVYNPSATG--K-----------------ELSGYTW 71 (323)
T ss_dssp GSCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCHHHHC--E-----------------EEEEEEE
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCchhccCCCCCCcccCC--c-----------------ccCCCeE
Confidence 56899999999 89999999999999999999 8987765678899997764 0 1146899
Q ss_pred eeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCC-CCCCcceEEeeCCCCCc---------hHHHhhhc
Q 025265 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSS---------IVSQLHSQ 214 (255)
Q Consensus 145 ~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~~-~~~~~dGIlGLg~~~~S---------l~~ql~~~ 214 (255)
.+.|++|+.+.|.+++|+|+|+ +..++++.|||++.....+ .....+||||||++.++ +..+|.++
T Consensus 72 ~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~ 147 (323)
T 1bxo_A 72 SISYGDGSSASGNVFTDSVTVG----GVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS 147 (323)
T ss_dssp EEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG
T ss_pred EEEeCCCCeEEEEEEEEEEEEC----CEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh
Confidence 9999999779999999999996 4667899999998862211 12578999999998654 56788876
Q ss_pred CCccceEEEecCCCCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 215 KLIRNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 215 g~i~~~FS~cL~~~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+-+++||+||.++.+|.|+||++|. +.++++|+||+.+
T Consensus 148 -i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 187 (323)
T 1bxo_A 148 -LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNS 187 (323)
T ss_dssp -BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCT
T ss_pred -cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCC
Confidence 3389999999876789999999985 6789999999854
No 30
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=99.96 E-value=3.5e-30 Score=233.01 Aligned_cols=168 Identities=15% Similarity=0.184 Sum_probs=137.3
Q ss_pred EeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q 025265 56 FQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAPGH 133 (255)
Q Consensus 56 ~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~--~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~ 133 (255)
.||.+. .+.+|+++|.|| +|++.|++||||+++||+|. +|. .|....++.|+|++| .+
T Consensus 9 ~~l~n~--~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~~~y~~~~S--T~------------- 68 (330)
T 1yg9_A 9 KLVHVF--INTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ-ECVGGACVCPNLQKYEKLKP--KY------------- 68 (330)
T ss_dssp SCEEEE--ECTTSEEEEEET--TEEEEEEEETTCCCEEEECT-TCCSGGGGSTTCCCCCCSSC--EE-------------
T ss_pred eeeecC--CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCCccCcccccCccCCCCC--ce-------------
Confidence 455432 266899999999 89999999999999999999 897 684345789999876 21
Q ss_pred CCCCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc------
Q 025265 134 HNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS------ 206 (255)
Q Consensus 134 ~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~-~~~~~~dGIlGLg~~~~S------ 206 (255)
....|.|.+.|++|+ +.|.+++|+|+|+ +..++++.|||++.. .. +...+.+||||||++.++
T Consensus 69 ----~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~ 138 (330)
T 1yg9_A 69 ----ISDGNVQVKFFDTGS-AVGRGIEDSLTIS----QLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGK 138 (330)
T ss_dssp ----EEEEEEEEEETTTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCC
T ss_pred ----EECCCEEEEEECCce-EEEEEEEEEEEEC----CEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCC
Confidence 113679999999995 5999999999996 466789999999886 32 223568999999999887
Q ss_pred -hHHHhhhcCCccceEEEecCCC--C--CeEEEECCCCC--CCCCeEEEECccC
Q 025265 207 -IVSQLHSQKLIRNVVGHCLSGG--G--GGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 207 -l~~ql~~~g~i~~~FS~cL~~~--~--~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
++.||+++++|+++||+||.+. . +|.|+||++|. +.++++|+||+..
T Consensus 139 ~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 192 (330)
T 1yg9_A 139 TVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD 192 (330)
T ss_dssp CHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT
T ss_pred CHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC
Confidence 7889999998899999999853 2 79999999975 5789999999743
No 31
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=99.96 E-value=4.9e-29 Score=229.26 Aligned_cols=163 Identities=20% Similarity=0.243 Sum_probs=127.5
Q ss_pred CeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCcee
Q 025265 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (255)
Q Consensus 65 ~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~~~C~~~~~c~~ 144 (255)
+..|+++|+||||+|++.|+|||||+++||+|. +|..| ++.|+|++|+- + ....|.|
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~~----~~~f~~~~SsT-----------------~-~~~~~~~ 68 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGT-PHSYI----DTYFDTERSST-----------------Y-RSKGFDV 68 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CBTTB----SCCCCGGGCTT-----------------C-EEEEEEE
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecC-CCCcc----ccCcccccCcc-----------------c-eeCCceE
Confidence 568999999999999999999999999999998 88765 47899988741 1 1146899
Q ss_pred eeecCCCceEeEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCC-CCCCcceEEeeCCCCCc--------hHHHhhhcC
Q 025265 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSS--------IVSQLHSQK 215 (255)
Q Consensus 145 ~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~~~~fGc~~~~~~~~-~~~~~dGIlGLg~~~~S--------l~~ql~~~g 215 (255)
.+.|++|+ +.|.+++|+|+|+. +......+.|+|..+....+ .....+||||||++.++ +..+|.+++
T Consensus 69 ~i~Yg~Gs-~~G~~~~Dtv~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~ 145 (383)
T 2ewy_A 69 TVKYTQGS-WTGFVGEDLVTIPK--GFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQA 145 (383)
T ss_dssp EEECSSCE-EEEEEEEEEEEETT--TEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHH
T ss_pred EEEECCcE-EEEEEEEEEEEECC--CccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHcc
Confidence 99999995 69999999999962 11112246788876542222 12468999999998764 456888888
Q ss_pred CccceEEEecCC---------CCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 216 LIRNVVGHCLSG---------GGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 216 ~i~~~FS~cL~~---------~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
.++++||+||.. ..+|.|+||++|. +.++++|+||+.+
T Consensus 146 ~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 194 (383)
T 2ewy_A 146 NIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE 194 (383)
T ss_dssp TCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB
T ss_pred CCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC
Confidence 788899999842 3579999999974 6789999999864
No 32
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=99.96 E-value=2.7e-29 Score=232.07 Aligned_cols=169 Identities=20% Similarity=0.201 Sum_probs=130.9
Q ss_pred EeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCC
Q 025265 56 FQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHN 135 (255)
Q Consensus 56 ~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~~~ 135 (255)
-+++++. +.+|+++|.||||+|++.|+|||||+++||+|. +|..| ++.|+|++|+ +
T Consensus 13 ~~l~~~~--~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~c~~~----~~~y~~~~Ss-----------------T 68 (395)
T 2qp8_A 13 DNLRGKS--GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PHPFL----HRYYQRQLSS-----------------T 68 (395)
T ss_dssp TCEEEET--TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CCTTC----SCCCCGGGCT-----------------T
T ss_pred eecCCCC--CceEEEEEEecCCCceEEEEEecCCCceEEECC-CCccc----cCCcCcccCC-----------------C
Confidence 3444443 668999999999999999999999999999998 78654 5789998874 1
Q ss_pred CCCCCCceeeeecCCCceEeEEEEEEEEEEeecCCCcCCC-ceEEeeeEecCCCC-CCCCcceEEeeCCCCCc-------
Q 025265 136 CEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNP-RLALGCGYNQVPGA-SYHPLDGILGLGKGKSS------- 206 (255)
Q Consensus 136 C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~-~~~fGc~~~~~~~~-~~~~~dGIlGLg~~~~S------- 206 (255)
+ ....|.|.+.|++|+ ++|.+++|+|+|+. +..+. .+.|+|+.+....+ .....+||||||+..++
T Consensus 69 ~-~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~ 143 (395)
T 2qp8_A 69 Y-RDLRKGVYVPYTQGK-WEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLE 143 (395)
T ss_dssp C-EEEEEEEEEECSSCE-EEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSC
T ss_pred c-eeCCceEEEEECCcE-EEEEEEeEEEEECC---CCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCC
Confidence 1 114689999999995 59999999999962 12222 36688876542222 13568999999998754
Q ss_pred -hHHHhhhcCCccceEEEecCC------------CCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 207 -IVSQLHSQKLIRNVVGHCLSG------------GGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 207 -l~~ql~~~g~i~~~FS~cL~~------------~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
+..+|.+++.|+++||+||.+ ..+|.|+||++|. +.++++|+||+.+
T Consensus 144 ~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 205 (395)
T 2qp8_A 144 PFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE 205 (395)
T ss_dssp CHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB
T ss_pred CHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC
Confidence 556999999888899999963 2579999999975 5789999999763
No 33
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=99.95 E-value=2e-28 Score=226.64 Aligned_cols=162 Identities=20% Similarity=0.199 Sum_probs=126.9
Q ss_pred CeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCcee
Q 025265 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (255)
Q Consensus 65 ~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~~~C~~~~~c~~ 144 (255)
+.+|+++|.||||+|++.|+|||||+++||+|. +| |. .++.|+|++|+. + ....|.|
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c--~~--~~~~y~~~~SsT-----------------~-~~~~~~~ 83 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSST-----------------Y-RDLRKGV 83 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCTT-----------------C-EEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccC-CC--Cc--ccCCcCcccCcc-----------------c-ccCCCEE
Confidence 458999999999999999999999999999998 77 43 468899988741 1 1247899
Q ss_pred eeecCCCceEeEEEEEEEEEEeecCCCcCCC-ceEEeeeEecCCCC-CCCCcceEEeeCCCCC--------chHHHhhhc
Q 025265 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNP-RLALGCGYNQVPGA-SYHPLDGILGLGKGKS--------SIVSQLHSQ 214 (255)
Q Consensus 145 ~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~~-~~~fGc~~~~~~~~-~~~~~dGIlGLg~~~~--------Sl~~ql~~~ 214 (255)
.+.|++|+ +.|.+++|+|+|+. ..... .+.|+|+......+ .....+||||||+..+ +++.+|+++
T Consensus 84 ~i~Yg~Gs-~~G~~~~D~v~ig~---~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q 159 (402)
T 3vf3_A 84 YVPYTQGK-WEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 159 (402)
T ss_dssp EEECSSCE-EEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEECcEE-EEEEEEEEEEEECC---ccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHc
Confidence 99999995 79999999999962 22222 34578877653222 2357899999999865 466799999
Q ss_pred CCccceEEEecCC------------CCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 215 KLIRNVVGHCLSG------------GGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 215 g~i~~~FS~cL~~------------~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
++|.++||+||.. ..+|.|+||++|. +.++++|+||+..
T Consensus 160 ~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 212 (402)
T 3vf3_A 160 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE 212 (402)
T ss_dssp SCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB
T ss_pred cCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC
Confidence 9998899999962 2479999999975 5789999999863
No 34
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=99.95 E-value=1.4e-28 Score=231.55 Aligned_cols=162 Identities=20% Similarity=0.195 Sum_probs=129.2
Q ss_pred CeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCcee
Q 025265 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 144 (255)
Q Consensus 65 ~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~~C~~~~~~~f~p~~S~v~C~s~~C~~~~~~~~~~C~~~~~c~~ 144 (255)
+.+|+++|+||||+|++.|+|||||+++||+|. +| |. .++.|+|++|+. + ....|.|
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~-~c--c~--~~~~y~~~~SsT-----------------~-~~~~~~~ 129 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSST-----------------Y-RDLRKGV 129 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCTT-----------------C-EEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecc-cc--cc--cCCcccCCCCCC-----------------c-ccCCccE
Confidence 558999999999999999999999999999998 77 43 468899988741 1 1146899
Q ss_pred eeecCCCceEeEEEEEEEEEEeecCCCcCC-CceEEeeeEecCCCC-CCCCcceEEeeCCCCC--------chHHHhhhc
Q 025265 145 ELEYADGGSSLGVLVKDAFAFNYTNGQRLN-PRLALGCGYNQVPGA-SYHPLDGILGLGKGKS--------SIVSQLHSQ 214 (255)
Q Consensus 145 ~~~Y~dgs~~~G~l~~Dtl~l~~~~g~~~~-~~~~fGc~~~~~~~~-~~~~~dGIlGLg~~~~--------Sl~~ql~~~ 214 (255)
.+.|++|+ +.|.+++|+|+|+. ...+ ..+.|+|+.+....+ .....+||||||+..+ +++.+|+++
T Consensus 130 ~i~Yg~Gs-~~G~~~~Dtv~ig~---~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q 205 (455)
T 3lpj_A 130 YVPYTQGK-WEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 205 (455)
T ss_dssp EEECSSCE-EEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEeCCeE-EEEEEEEEEEEECC---CcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHc
Confidence 99999995 69999999999962 1222 246788887753222 2357899999999865 456789999
Q ss_pred CCccceEEEecCC------------CCCeEEEECCCCC--CCCCeEEEECccC
Q 025265 215 KLIRNVVGHCLSG------------GGGGFLFFGDDLY--DSSRVVWTSMSSD 253 (255)
Q Consensus 215 g~i~~~FS~cL~~------------~~~G~l~fG~~~~--~~~~l~~tPli~~ 253 (255)
++|.++||+||.+ ..+|.|+||++|. +.++++|+||+..
T Consensus 206 ~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 258 (455)
T 3lpj_A 206 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE 258 (455)
T ss_dssp SCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB
T ss_pred cCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC
Confidence 9998899999963 3579999999975 5789999999763
No 35
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.85 E-value=1.7e-21 Score=146.47 Aligned_cols=88 Identities=20% Similarity=0.361 Sum_probs=74.1
Q ss_pred EEeeecCCCCCeeEEEEEEecCCCceEEEEEeCCCCceeEecCCCCC----CCCCCCCCCCCCCCCCCCCCCcccccCCC
Q 025265 55 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV----RCVEAPHPLYRPSNDLVPCEDPICASLHA 130 (255)
Q Consensus 55 ~~p~~~~~~~~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c~~~C~----~C~~~~~~~f~p~~S~v~C~s~~C~~~~~ 130 (255)
.+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|. +|. .|.. ++.|+|++|+-
T Consensus 4 ~~~l~n~--~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~C~~--~~~y~p~~SsT------------ 66 (97)
T 1lya_A 4 PEVLKNY--MDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI-HCKLLDIACWI--HHKYNSDKSST------------ 66 (97)
T ss_dssp EEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCTTCHHHHT--SCCBCGGGCTT------------
T ss_pred eEeeEEC--CCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc-CccCcccccCC--CCCCCchhCCC------------
Confidence 4677542 3779999999999999999999999999999999 897 6874 68999988741
Q ss_pred CCCCCCCCCCCceeeeecCCCceEeEEEEEEEEEEe
Q 025265 131 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFN 166 (255)
Q Consensus 131 ~~~~~C~~~~~c~~~~~Y~dgs~~~G~l~~Dtl~l~ 166 (255)
+ ....|.|.+.|++|+ +.|.+++|+|+|+
T Consensus 67 -----~-~~~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~ 95 (97)
T 1lya_A 67 -----Y-VKNGTSFDIHYGSGS-LSGYLSQDTVSVP 95 (97)
T ss_dssp -----C-EEEEEEEEEECSSCE-EEEEEEEEEEEES
T ss_pred -----c-eeCCCcEEEEECCcE-EEEEEEEEEEEEC
Confidence 1 124689999999995 8999999999996
No 36
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.28 E-value=4.5e-12 Score=108.87 Aligned_cols=83 Identities=24% Similarity=0.305 Sum_probs=66.8
Q ss_pred CcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc------hHHHhhhcCCc-cceEEEecCCC--C--CeEEEECCC
Q 025265 171 QRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS------IVSQLHSQKLI-RNVVGHCLSGG--G--GGFLFFGDD 238 (255)
Q Consensus 171 ~~~~~~~~fGc~~~~~~~-~~~~~~dGIlGLg~~~~S------l~~ql~~~g~i-~~~FS~cL~~~--~--~G~l~fG~~ 238 (255)
++.++++.|||++..... +.....+||||||++.++ +..||.++|+| +++||+||.+. . +|.|+||++
T Consensus 2 g~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 2 GVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp CEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred CeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 345689999999986321 334578999999998765 56799999999 89999999863 2 899999999
Q ss_pred CC--CCCCeEEEECccC
Q 025265 239 LY--DSSRVVWTSMSSD 253 (255)
Q Consensus 239 ~~--~~~~l~~tPli~~ 253 (255)
|. +.++++|+|++.+
T Consensus 82 d~~~~~g~l~~~p~~~~ 98 (241)
T 1lya_B 82 DSKYYKGSLSYLNVTRK 98 (241)
T ss_dssp CGGGEEEEEEEEECSSB
T ss_pred CHHHcCCceEEEECccc
Confidence 85 5689999999753
No 37
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=77.14 E-value=2.4 Score=31.87 Aligned_cols=29 Identities=21% Similarity=0.251 Sum_probs=23.6
Q ss_pred EEEEEec---CCCceEEEEEeCCCCceeEecC
Q 025265 69 NVTMYIG---QPARPYFLDLDTGSDLTWLQCD 97 (255)
Q Consensus 69 ~~~i~iG---TP~q~~~lilDTGS~~~Wv~c~ 97 (255)
.+.+.|| +|+|....++|||.+++-+.-.
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 4555555 8899999999999999998754
No 38
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=76.62 E-value=2.7 Score=30.93 Aligned_cols=25 Identities=32% Similarity=0.440 Sum_probs=22.0
Q ss_pred EEEEEecCCCceEEEEEeCCCCceeEe
Q 025265 69 NVTMYIGQPARPYFLDLDTGSDLTWLQ 95 (255)
Q Consensus 69 ~~~i~iGTP~q~~~lilDTGS~~~Wv~ 95 (255)
++.+.|| .|.+.+++|||.+++-+.
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 5778888 589999999999999886
No 39
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=75.86 E-value=2.9 Score=30.52 Aligned_cols=26 Identities=38% Similarity=0.312 Sum_probs=22.1
Q ss_pred EEEEEecCCCceEEEEEeCCCCceeEec
Q 025265 69 NVTMYIGQPARPYFLDLDTGSDLTWLQC 96 (255)
Q Consensus 69 ~~~i~iGTP~q~~~lilDTGS~~~Wv~c 96 (255)
++.+.|| .|.+.+.+|||.+++-+.-
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEE 35 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEec
Confidence 5678888 5999999999999998853
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=73.95 E-value=3 Score=31.92 Aligned_cols=30 Identities=20% Similarity=0.218 Sum_probs=25.7
Q ss_pred CeeEEEEEEecCCCceEEEEEeCCCCceeEec
Q 025265 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQC 96 (255)
Q Consensus 65 ~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c 96 (255)
.+.+++.+.|+ .+++.+++|||++.+-+.-
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 56789999998 5799999999999887753
No 41
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=70.49 E-value=4.4 Score=29.55 Aligned_cols=26 Identities=38% Similarity=0.454 Sum_probs=22.0
Q ss_pred EEEEEecCCCceEEEEEeCCCCceeEec
Q 025265 69 NVTMYIGQPARPYFLDLDTGSDLTWLQC 96 (255)
Q Consensus 69 ~~~i~iGTP~q~~~lilDTGS~~~Wv~c 96 (255)
++.+.|| .|.+.+.+|||.+++-+.-
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~ 35 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAG 35 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcC
Confidence 5678888 5999999999999988853
No 42
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=63.89 E-value=6.7 Score=29.40 Aligned_cols=23 Identities=35% Similarity=0.583 Sum_probs=20.2
Q ss_pred EEecCCCceEEEEEeCCCCceeEec
Q 025265 72 MYIGQPARPYFLDLDTGSDLTWLQC 96 (255)
Q Consensus 72 i~iGTP~q~~~lilDTGS~~~Wv~c 96 (255)
+.|| .|.+.+++|||.+++-+.-
T Consensus 18 ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 18 IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EEEC--CEEEEEEecCCCCcEEEcc
Confidence 8888 5999999999999998863
No 43
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=59.30 E-value=9.4 Score=28.52 Aligned_cols=27 Identities=19% Similarity=0.463 Sum_probs=22.6
Q ss_pred EEEEEecCCCceEEEEEeCCCCceeEecC
Q 025265 69 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 97 (255)
Q Consensus 69 ~~~i~iGTP~q~~~lilDTGS~~~Wv~c~ 97 (255)
.+.+.|| .|.+.++||||.+++-+.-.
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecc
Confidence 5668888 59999999999999988644
No 44
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=58.25 E-value=9 Score=29.71 Aligned_cols=30 Identities=13% Similarity=0.244 Sum_probs=25.7
Q ss_pred CeeEEEEEEecCCCceEEEEEeCCCCceeEec
Q 025265 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQC 96 (255)
Q Consensus 65 ~~~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c 96 (255)
...|++++.|. .+++.+++|||++.+-+.-
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~ 51 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQ 51 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCH
Confidence 45789999997 5899999999999988864
No 45
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=44.80 E-value=21 Score=27.23 Aligned_cols=28 Identities=25% Similarity=0.370 Sum_probs=22.5
Q ss_pred eEEEEEEecCCCceEEEEEeCCCCceeEec
Q 025265 67 YYNVTMYIGQPARPYFLDLDTGSDLTWLQC 96 (255)
Q Consensus 67 ~Y~~~i~iGTP~q~~~lilDTGS~~~Wv~c 96 (255)
.-++.+.|+ .|...+++|||.+.+-+.-
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEcc
Confidence 346778887 5899999999999988853
No 46
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=44.44 E-value=20 Score=29.51 Aligned_cols=25 Identities=40% Similarity=0.357 Sum_probs=21.8
Q ss_pred EEEEEecCCCceEEEEEeCCCCceeEe
Q 025265 69 NVTMYIGQPARPYFLDLDTGSDLTWLQ 95 (255)
Q Consensus 69 ~~~i~iGTP~q~~~lilDTGS~~~Wv~ 95 (255)
.+.+.|| .|.+.+++|||.+++-+.
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIE 34 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEe
Confidence 6778888 589999999999998885
No 47
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=40.66 E-value=22 Score=26.83 Aligned_cols=20 Identities=25% Similarity=0.280 Sum_probs=16.3
Q ss_pred CceEEEEEeCCCCceeEecC
Q 025265 78 ARPYFLDLDTGSDLTWLQCD 97 (255)
Q Consensus 78 ~q~~~lilDTGS~~~Wv~c~ 97 (255)
.|.+.+++|||.+++-+.-.
T Consensus 29 gq~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 29 SVYITALLDSGADITIISEE 48 (124)
T ss_dssp EEEEEEEECTTCSSCEEETT
T ss_pred CEEEEEEecCCCCcEEEecc
Confidence 46679999999999988643
No 48
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=38.75 E-value=36 Score=27.92 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=21.9
Q ss_pred eEEEE---EEecC-----CCceEEEEEeCCCCceeEec
Q 025265 67 YYNVT---MYIGQ-----PARPYFLDLDTGSDLTWLQC 96 (255)
Q Consensus 67 ~Y~~~---i~iGT-----P~q~~~lilDTGS~~~Wv~c 96 (255)
.|.+. |.||. +.....+++|||++++++|-
T Consensus 189 ~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 189 YWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp TEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred eEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 45544 66765 23457899999999999974
No 49
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=30.25 E-value=49 Score=26.88 Aligned_cols=27 Identities=19% Similarity=0.108 Sum_probs=20.7
Q ss_pred EEEecCC----CceEEEEEeCCCCceeEecC
Q 025265 71 TMYIGQP----ARPYFLDLDTGSDLTWLQCD 97 (255)
Q Consensus 71 ~i~iGTP----~q~~~lilDTGS~~~Wv~c~ 97 (255)
.|+||.- .....+++|||++++++|-.
T Consensus 107 ~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 107 QVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp EEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred EEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 4667652 34578999999999999864
No 50
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=28.10 E-value=61 Score=27.71 Aligned_cols=27 Identities=30% Similarity=0.304 Sum_probs=20.5
Q ss_pred EEEecC--CCceEEEEEeCCCCceeEecC
Q 025265 71 TMYIGQ--PARPYFLDLDTGSDLTWLQCD 97 (255)
Q Consensus 71 ~i~iGT--P~q~~~lilDTGS~~~Wv~c~ 97 (255)
.|.||. +.....+++|||++++++|-.
T Consensus 201 ~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 201 RATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp EEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred EEEECCEecCCCceEEEecCCccEECCHH
Confidence 366775 234578999999999999854
No 51
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=26.83 E-value=78 Score=27.09 Aligned_cols=27 Identities=22% Similarity=0.223 Sum_probs=20.7
Q ss_pred EEEecCC---CceEEEEEeCCCCceeEecC
Q 025265 71 TMYIGQP---ARPYFLDLDTGSDLTWLQCD 97 (255)
Q Consensus 71 ~i~iGTP---~q~~~lilDTGS~~~Wv~c~ 97 (255)
.|.||.- .....+++|||++++++|-.
T Consensus 200 ~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 200 GYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp EEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred eEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 4677752 24578999999999999864
No 52
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=26.18 E-value=85 Score=26.79 Aligned_cols=32 Identities=28% Similarity=0.481 Sum_probs=23.0
Q ss_pred eeEEEE---EEecCC---CceEEEEEeCCCCceeEecC
Q 025265 66 GYYNVT---MYIGQP---ARPYFLDLDTGSDLTWLQCD 97 (255)
Q Consensus 66 ~~Y~~~---i~iGTP---~q~~~lilDTGS~~~Wv~c~ 97 (255)
+.|.+. |.||.- .....+++|||++++++|-.
T Consensus 188 ~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 188 GYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDE 225 (325)
T ss_dssp SSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHH
T ss_pred ceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHH
Confidence 345443 667652 35688999999999999854
No 53
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=25.81 E-value=48 Score=28.44 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=23.6
Q ss_pred eeEEEE---EEecC---CCceEEEEEeCCCCceeEecC
Q 025265 66 GYYNVT---MYIGQ---PARPYFLDLDTGSDLTWLQCD 97 (255)
Q Consensus 66 ~~Y~~~---i~iGT---P~q~~~lilDTGS~~~Wv~c~ 97 (255)
+.|.+. |.||. +.....+++|||++++++|-.
T Consensus 193 ~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 193 GFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp SSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred ceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 355554 56765 245789999999999999854
No 54
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=25.57 E-value=62 Score=26.50 Aligned_cols=25 Identities=40% Similarity=0.357 Sum_probs=21.6
Q ss_pred EEEEEecCCCceEEEEEeCCCCceeEe
Q 025265 69 NVTMYIGQPARPYFLDLDTGSDLTWLQ 95 (255)
Q Consensus 69 ~~~i~iGTP~q~~~lilDTGS~~~Wv~ 95 (255)
.+++.|+ .|...+++|||.+++-+.
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~ 138 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIE 138 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEC
T ss_pred cEEEEEC--CEEEeeeecccCCceeee
Confidence 6778888 489999999999998874
No 55
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=23.03 E-value=54 Score=28.07 Aligned_cols=26 Identities=23% Similarity=0.198 Sum_probs=20.0
Q ss_pred EEecC-CCceEEEEEeCCCCceeEecC
Q 025265 72 MYIGQ-PARPYFLDLDTGSDLTWLQCD 97 (255)
Q Consensus 72 i~iGT-P~q~~~lilDTGS~~~Wv~c~ 97 (255)
|.||. +.....+++|||++++++|-.
T Consensus 198 i~v~~~~~~~~~aiiDSGTs~~~lP~~ 224 (323)
T 1bxo_A 198 YTAGSQSGDGFSGIADTGTTLLLLDDS 224 (323)
T ss_dssp EEETTEEEEEEEEEECTTCSSEEECHH
T ss_pred EEECCccCCCceEEEeCCCCceeCCHH
Confidence 56764 334578999999999999854
No 56
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=22.89 E-value=87 Score=28.72 Aligned_cols=31 Identities=19% Similarity=0.208 Sum_probs=22.3
Q ss_pred eEEEE---EEecC-----CCceEEEEEeCCCCceeEecC
Q 025265 67 YYNVT---MYIGQ-----PARPYFLDLDTGSDLTWLQCD 97 (255)
Q Consensus 67 ~Y~~~---i~iGT-----P~q~~~lilDTGS~~~Wv~c~ 97 (255)
.|.+. |.||. +.....+++|||++++++|-.
T Consensus 232 ~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (478)
T 1qdm_A 232 YWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTA 270 (478)
T ss_dssp TEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHH
T ss_pred eEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHH
Confidence 45444 56664 235678999999999999843
Done!