Your job contains 1 sequence.
>025266
MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSKVFRLFGREKPIHH
VLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSN
ASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLW
LLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLK
KVLSRIPKGALKKKD
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025266
(255 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2160447 - symbol:BTI3 "VIRB2-interacting prote... 795 4.2e-79 1
TAIR|locus:2128494 - symbol:BTI1 "VIRB2-interacting prote... 759 2.7e-75 1
TAIR|locus:2128238 - symbol:BTI2 "VIRB2-interacting prote... 743 1.4e-73 1
TAIR|locus:2062882 - symbol:AT2G46170 species:3702 "Arabi... 741 2.2e-73 1
TAIR|locus:2082772 - symbol:AT3G61560 species:3702 "Arabi... 467 2.4e-44 1
TAIR|locus:2089663 - symbol:AT3G18260 "AT3G18260" species... 431 1.6e-40 1
TAIR|locus:2049077 - symbol:AT2G15280 "AT2G15280" species... 366 1.2e-33 1
TAIR|locus:2080315 - symbol:AT3G54120 "AT3G54120" species... 332 4.9e-30 1
TAIR|locus:1005716554 - symbol:AT3G10915 species:3702 "Ar... 259 2.6e-22 1
TAIR|locus:2046783 - symbol:RTNLB13 "AT2G23640" species:3... 231 2.5e-19 1
TAIR|locus:2090609 - symbol:AT3G19460 "AT3G19460" species... 194 2.0e-15 1
UNIPROTKB|F1RPY3 - symbol:RTN3 "Uncharacterized protein" ... 173 3.4e-13 1
UNIPROTKB|Q08D83 - symbol:RTN3 "Reticulon-3" species:9913... 172 4.4e-13 1
UNIPROTKB|J9P9U4 - symbol:J9P9U4 "Uncharacterized protein... 174 4.8e-13 1
ZFIN|ZDB-GENE-030710-3 - symbol:rtn1b "reticulon 1b" spec... 179 1.2e-12 1
UNIPROTKB|D4A1U2 - symbol:Rtn3 "Reticulon 3, isoform CRA_... 169 2.1e-12 1
UNIPROTKB|E1BUW7 - symbol:Gga.4205 "Uncharacterized prote... 170 5.0e-12 1
UNIPROTKB|A8MT72 - symbol:RTN1 "Reticulon-1" species:9606... 162 5.0e-12 1
UNIPROTKB|F5H774 - symbol:RTN3 "Reticulon-3" species:9606... 174 5.5e-12 1
UNIPROTKB|Q1LZ76 - symbol:RTN1 "Uncharacterized protein" ... 161 6.4e-12 1
UNIPROTKB|F1PNX5 - symbol:RTN1 "Uncharacterized protein" ... 161 6.4e-12 1
UNIPROTKB|O95197 - symbol:RTN3 "Reticulon-3" species:9606... 174 6.4e-12 1
UNIPROTKB|I3LBH0 - symbol:RTN1 "Uncharacterized protein" ... 160 8.2e-12 1
UNIPROTKB|F1PVP5 - symbol:F1PVP5 "Uncharacterized protein... 172 1.1e-11 1
UNIPROTKB|Q7YRW9 - symbol:RTN4 "Uncharacterized protein" ... 157 1.7e-11 1
UNIPROTKB|Q6IM70 - symbol:RTN4 "RTN4-C" species:9823 "Sus... 157 1.7e-11 1
UNIPROTKB|F1NCK0 - symbol:Gga.4205 "Uncharacterized prote... 156 2.2e-11 1
UNIPROTKB|H7C106 - symbol:RTN4 "Reticulon-4" species:9606... 150 9.4e-11 1
RGD|620988 - symbol:Rtn3 "reticulon 3" species:10116 "Rat... 168 1.2e-10 1
MGI|MGI:1339970 - symbol:Rtn3 "reticulon 3" species:10090... 168 1.3e-10 1
UNIPROTKB|F1NH22 - symbol:RTN1 "Uncharacterized protein" ... 151 1.9e-10 1
ZFIN|ZDB-GENE-030710-2 - symbol:rtn4b "reticulon 4b" spec... 166 2.6e-10 1
UNIPROTKB|E1BP30 - symbol:E1BP30 "Uncharacterized protein... 165 3.1e-10 1
ZFIN|ZDB-GENE-030710-5 - symbol:rtn3 "reticulon 3" specie... 155 4.6e-10 1
UNIPROTKB|I3L6J1 - symbol:RTN1 "Uncharacterized protein" ... 164 5.1e-10 1
UNIPROTKB|Q16799 - symbol:RTN1 "Reticulon-1" species:9606... 164 5.1e-10 1
UNIPROTKB|Q6IFY7 - symbol:rtn1-a "Reticulon-1-A" species:... 149 5.6e-10 1
UNIPROTKB|F1P5B2 - symbol:Gga.4205 "Uncharacterized prote... 159 6.8e-10 1
UNIPROTKB|F1P5B1 - symbol:Gga.4205 "Uncharacterized prote... 157 1.2e-09 1
UNIPROTKB|F1Q231 - symbol:RTN1 "Uncharacterized protein" ... 161 1.3e-09 1
UNIPROTKB|F1Q2B3 - symbol:RTN1 "Uncharacterized protein" ... 161 1.3e-09 1
UNIPROTKB|F8W914 - symbol:RTN4 "Reticulon-4" species:9606... 154 3.5e-09 1
UNIPROTKB|F1NH23 - symbol:RTN1 "Uncharacterized protein" ... 158 3.9e-09 1
RGD|620986 - symbol:Rtn1 "reticulon 1" species:10116 "Rat... 158 4.0e-09 1
MGI|MGI:1933947 - symbol:Rtn1 "reticulon 1" species:10090... 158 4.1e-09 1
UNIPROTKB|Q1RMR8 - symbol:RTN4 "RTN4 protein" species:991... 154 4.3e-09 1
ZFIN|ZDB-GENE-030131-2426 - symbol:rtn1a "reticulon 1a" s... 158 4.3e-09 1
UNIPROTKB|F1NNJ7 - symbol:Gga.4205 "Uncharacterized prote... 156 4.8e-09 2
MGI|MGI:1915835 - symbol:Rtn4 "reticulon 4" species:10090... 155 1.7e-08 1
UNIPROTKB|F8WAM4 - symbol:RTN4 "Reticulon-4" species:9606... 154 1.9e-08 1
UNIPROTKB|D4AEM9 - symbol:Rtn4 "Reticulon-4" species:1011... 154 2.1e-08 1
UNIPROTKB|F1NCP4 - symbol:Gga.4205 "Uncharacterized prote... 156 2.2e-08 2
RGD|620989 - symbol:Rtn4 "reticulon 4" species:10116 "Rat... 154 2.4e-08 1
UNIPROTKB|F1LQN3 - symbol:Rtn4 "Reticulon-4" species:1011... 154 2.4e-08 1
UNIPROTKB|Q9NQC3 - symbol:RTN4 "Reticulon-4" species:9606... 154 2.5e-08 1
UNIPROTKB|F1N405 - symbol:RTN4 "Uncharacterized protein" ... 154 2.5e-08 1
UNIPROTKB|A7MC64 - symbol:rtn1 "Reticulon-1" species:8364... 151 3.5e-08 1
UNIPROTKB|E2R925 - symbol:RTN4 "Uncharacterized protein" ... 154 3.6e-08 2
UNIPROTKB|J9P0R7 - symbol:RTN4 "Uncharacterized protein" ... 154 3.7e-08 2
ZFIN|ZDB-GENE-030710-1 - symbol:rtn4a "reticulon 4a" spec... 141 1.3e-07 1
UNIPROTKB|Q5MY90 - symbol:rtn1-b "Reticulon-1-B" species:... 146 1.4e-07 1
FB|FBgn0053113 - symbol:Rtnl1 "Reticulon-like1" species:7... 134 3.0e-06 1
WB|WBGene00004336 - symbol:ret-1 species:6239 "Caenorhabd... 137 9.8e-06 1
UNIPROTKB|G3X7U3 - symbol:LOC100847649 "Uncharacterized p... 103 2.5e-05 1
TAIR|locus:2058223 - symbol:AT2G43420 species:3702 "Arabi... 119 0.00015 1
CGD|CAL0001315 - symbol:orf19.3799 species:5476 "Candida ... 113 0.00039 1
UNIPROTKB|Q5A691 - symbol:RTN1 "Potential conserved endop... 113 0.00039 1
>TAIR|locus:2160447 [details] [associations]
symbol:BTI3 "VIRB2-interacting protein 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0071458 "integral to cytosolic side of endoplasmic reticulum
membrane" evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular
network" evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IMP] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005233 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 GO:GO:0071782 EMBL:AY035169
EMBL:AY057638 EMBL:AY150449 IPI:IPI00523388 RefSeq:NP_198975.1
UniGene:At.8344 ProteinModelPortal:Q9FFS0 IntAct:Q9FFS0
STRING:Q9FFS0 PaxDb:Q9FFS0 PRIDE:Q9FFS0 EnsemblPlants:AT5G41600.1
GeneID:834162 KEGG:ath:AT5G41600 TAIR:At5g41600 InParanoid:Q9FFS0
OMA:VMWLLTY PhylomeDB:Q9FFS0 ProtClustDB:CLSN2682625
Genevestigator:Q9FFS0 Uniprot:Q9FFS0
Length = 257
Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
Identities = 155/257 (60%), Positives = 187/257 (72%)
Query: 1 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXX-XXXXXXXAFKSKVFRLFGREKPIH 59
M E ES + +VEKI +FKSK++RLFGREKP+H
Sbjct: 1 MVEDHKHEESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVH 60
Query: 60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
VLG GKPADIFLWRNKK+S GVLG TA WVLFEL EYHL+ +CH +I +LA LFLWS
Sbjct: 61 KVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWS 120
Query: 120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
NA TFI+KS P IP V +PE +L+ S LR EINR L +LR IASG+D+KKF+ VIAGL
Sbjct: 121 NACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGL 180
Query: 180 WLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVL 239
W+LSI+G+ NF+TLFY VLL T+PV+YEKYEDK+D++GEKA EIKKQYAV DEKVL
Sbjct: 181 WVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVL 240
Query: 240 KKVLSRIPKGAL-KKKD 255
+KV+S+IP+GAL KKKD
Sbjct: 241 RKVISKIPRGALNKKKD 257
>TAIR|locus:2128494 [details] [associations]
symbol:BTI1 "VIRB2-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0071458 "integral to
cytosolic side of endoplasmic reticulum membrane" evidence=IDA]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161559 EMBL:AL035394 GO:GO:0071458 PANTHER:PTHR10994
GO:GO:0071786 EMBL:AY050321 EMBL:AY133635 EMBL:AY087881
IPI:IPI00517163 PIR:T05595 RefSeq:NP_194094.1 UniGene:At.25485
ProteinModelPortal:Q9SUR3 SMR:Q9SUR3 STRING:Q9SUR3 PaxDb:Q9SUR3
PRIDE:Q9SUR3 EnsemblPlants:AT4G23630.1 GeneID:828463
KEGG:ath:AT4G23630 TAIR:At4g23630 eggNOG:NOG242905
HOGENOM:HOG000237479 InParanoid:Q9SUR3 OMA:EIGHGRD PhylomeDB:Q9SUR3
ProtClustDB:CLSN2685988 Genevestigator:Q9SUR3 GO:GO:0071782
Uniprot:Q9SUR3
Length = 275
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 146/212 (68%), Positives = 174/212 (82%)
Query: 43 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLIT 102
+ KSKV+RLFGRE+P+H VLG GKPADIF+W+NKK+S GVLGGATA WV+FEL+EYHL+T
Sbjct: 65 SMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLT 124
Query: 103 LVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLRE 162
L+CH+ I+ LAVLFLWSNA+ FINKSPP+IP V +PE+ +L+ AS LR EINR + LRE
Sbjct: 125 LLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLRE 184
Query: 163 IASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEK 222
IASGRDLKKFL IAGLW+LSI+G NF+TL YI VLL TVP+ Y+KYEDK+D GEK
Sbjct: 185 IASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEK 244
Query: 223 ATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 254
A IE+KKQYAV DEKVL S+IP G LK K
Sbjct: 245 AMIELKKQYAVLDEKVL----SKIPLGPLKNK 272
>TAIR|locus:2128238 [details] [associations]
symbol:BTI2 "VIRB2-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0071458
"integral to cytosolic side of endoplasmic reticulum membrane"
evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0010286 "heat acclimation" evidence=RCA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005886
GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882
EMBL:AL161531 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 ProtClustDB:CLSN2685988
GO:GO:0071782 EMBL:AY034901 EMBL:AY048273 EMBL:AY057606
EMBL:BT002368 EMBL:AY086294 IPI:IPI00525362 PIR:T13013
RefSeq:NP_192861.1 UniGene:At.3649 ProteinModelPortal:Q9SUT9
SMR:Q9SUT9 IntAct:Q9SUT9 STRING:Q9SUT9 PaxDb:Q9SUT9 PRIDE:Q9SUT9
EnsemblPlants:AT4G11220.1 GeneID:826724 KEGG:ath:AT4G11220
TAIR:At4g11220 InParanoid:Q9SUT9 OMA:FANLRQI PhylomeDB:Q9SUT9
Genevestigator:Q9SUT9 Uniprot:Q9SUT9
Length = 271
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 141/215 (65%), Positives = 176/215 (81%)
Query: 43 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLIT 102
+ KSKV+RLFGRE+P+H VLG GKPADIF+W++KK+S GV GGAT WVLFEL+EYHL+T
Sbjct: 61 SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLT 120
Query: 103 LVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLRE 162
L+CH+ I++LAVLFLWSNA+ FI+KSPP+IP V +PE+ +L+ AS LR EINR ++ LRE
Sbjct: 121 LLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLRE 180
Query: 163 IASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEK 222
IASGRD+KKFL IAGLW+LSI+G +F+TL YI VLL TVP+ Y+KYEDK+DS+GEK
Sbjct: 181 IASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEK 240
Query: 223 ATIEIKKQYAVFDEKVLKKVLSRIPKGALK--KKD 255
A E+KKQYAV D KV S+IP+G LK KKD
Sbjct: 241 AMAELKKQYAVLDAKVF----SKIPRGPLKDKKKD 271
>TAIR|locus:2062882 [details] [associations]
symbol:AT2G46170 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0080167 "response
to karrikin" evidence=IEP] [GO:0006007 "glucose catabolic process"
evidence=RCA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0080167 EMBL:AC005397
PANTHER:PTHR10994 eggNOG:NOG303514 HOGENOM:HOG000237479
EMBL:AY053421 EMBL:AY074836 IPI:IPI00521101 PIR:E84899
RefSeq:NP_566065.1 UniGene:At.13080 ProteinModelPortal:O82352
SMR:O82352 PaxDb:O82352 PRIDE:O82352 EnsemblPlants:AT2G46170.1
GeneID:819224 KEGG:ath:AT2G46170 TAIR:At2g46170 InParanoid:O82352
OMA:RPLICSI PhylomeDB:O82352 ProtClustDB:CLSN2688961
Genevestigator:O82352 Uniprot:O82352
Length = 255
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 143/255 (56%), Positives = 186/255 (72%)
Query: 1 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXXXXXXXX-XAFKSKVFRLFGREKPIH 59
MAE + +++SL+EKI+ A K+K++R+FGREKP+H
Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVH 60
Query: 60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
VLG GKPAD+FLWR+KK+S VLG ATA+WVLFEL+EYHL++L+CHISIL+L LFLWS
Sbjct: 61 KVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWS 120
Query: 120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
NA T INK+ P+IP + +PE+ L AS+LR E+N+A +LR IA GRDLKKFL V+ GL
Sbjct: 121 NAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGL 180
Query: 180 WLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVL 239
W++S+VGNW NF+TL YI FV+LHTVP++YEK+EDK+D EKA E++KQY VFDEKVL
Sbjct: 181 WIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVL 240
Query: 240 KKVLSRIPKGALKKK 254
S+IP +LK K
Sbjct: 241 ----SKIPIASLKAK 251
>TAIR|locus:2082772 [details] [associations]
symbol:AT3G61560 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0005886 GO:GO:0009506 EMBL:CP002686 PANTHER:PTHR10994
IPI:IPI00540028 RefSeq:NP_001030913.1 UniGene:At.34268 PRIDE:F4JFD4
EnsemblPlants:AT3G61560.2 GeneID:825329 KEGG:ath:AT3G61560
Uniprot:F4JFD4
Length = 264
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 118/268 (44%), Positives = 152/268 (56%)
Query: 1 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXXXXXXXX-XAFKSKVFRLFGREKPIH 59
MAE + ++SL+EKI A K+K++RLFGREKP+H
Sbjct: 1 MAEELEKSMHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVH 60
Query: 60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
VLG G PAD+FLWR+KK+SA VLG ATA+WVLFEL+EYH ++LVCHI I +LA LFL S
Sbjct: 61 KVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLS 120
Query: 120 NASTFINKSP-PEIPVVT--LPEKFVLEFAS-ALRY---EINRALAVLR-EIAS--GRDL 169
NA F+NK P T E + F LR EI+ L E S G
Sbjct: 121 NAHAFMNKGTFPYDCFCTEKRAEPGLCYFKEHCLRKGLEEISHELIQSTYETFSIMGFVT 180
Query: 170 KK--FLGVIAGLWLLSIVGNWCN-FVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIE 226
+ ++G+ G W + +G C V L FV+LHTVP++YEK+EDK+D EK E
Sbjct: 181 RTSIYIGISGGFWAVDNLG--CGKLVQLLDSCFVVLHTVPMLYEKHEDKVDPVAEKTLKE 238
Query: 227 IKKQYAVFDEKVLKKVLSRIPKGALKKK 254
+KK Y VFDEKVL S++P +LK K
Sbjct: 239 LKKHYMVFDEKVL----SKLPVASLKAK 262
>TAIR|locus:2089663 [details] [associations]
symbol:AT3G18260 "AT3G18260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005789
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:AP000414 EMBL:BT024845
EMBL:AY087239 IPI:IPI00546437 RefSeq:NP_566604.1 UniGene:At.38585
ProteinModelPortal:Q9LJQ5 PRIDE:Q9LJQ5 EnsemblPlants:AT3G18260.1
GeneID:821354 KEGG:ath:AT3G18260 TAIR:At3g18260 eggNOG:NOG309784
InParanoid:Q9LJQ5 OMA:CSFTTLL PhylomeDB:Q9LJQ5
ProtClustDB:CLSN2688524 Genevestigator:Q9LJQ5 Uniprot:Q9LJQ5
Length = 225
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 87/208 (41%), Positives = 126/208 (60%)
Query: 47 KVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCH 106
K +LF R++ IH + G GK ADI LWR KI+A ++ G + +W L E++EY+ ITL+CH
Sbjct: 19 KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICH 78
Query: 107 ISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASG 166
S+ S+ F+WS AS F+N P IP V L E + A + N+ L L ++A G
Sbjct: 79 ASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACG 138
Query: 167 RDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIE 226
RD F L+++SI+G + NFV L +I FV + T+PV+YE YED +D+ K +
Sbjct: 139 RDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRK 198
Query: 227 IKKQYAVFDEKVLKKVLSRIPKGALKKK 254
+KK Y +KV VLS+IP+G +K K
Sbjct: 199 MKKLY----KKVDTNVLSKIPRGTVKNK 222
>TAIR|locus:2049077 [details] [associations]
symbol:AT2G15280 "AT2G15280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 EMBL:AC007267
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:BX821446 EMBL:BT010716
EMBL:BT010986 IPI:IPI00533223 IPI:IPI00548624 PIR:A84527
RefSeq:NP_179130.2 RefSeq:NP_973467.1 UniGene:At.22376
UniGene:At.40435 ProteinModelPortal:Q6NPD8
EnsemblPlants:AT2G15280.1 GeneID:816017 KEGG:ath:AT2G15280
TAIR:At2g15280 eggNOG:NOG300173 InParanoid:Q6NPD8 OMA:VAREIYV
PhylomeDB:Q6NPD8 ProtClustDB:CLSN2690715 Genevestigator:Q6NPD8
Uniprot:Q6NPD8
Length = 201
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 74/202 (36%), Positives = 120/202 (59%)
Query: 55 EKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAV 114
E+ +H + G AD+ +W+N++ +LG T +W LFE Y V + +LS+ +
Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61
Query: 115 LFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLG 174
LFLW+ ++ N+ P++P + + E+FV A A+R IN LAV REI GR+ K+
Sbjct: 62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121
Query: 175 VIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIE---IKKQY 231
V LW +S VGN+ NF+T+ Y+ VL +P +YE+Y+D ID EK ++ I+ QY
Sbjct: 122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLID---EKLSLTHRVIQTQY 178
Query: 232 AVFDEKVLKKVLSRIPKGALKK 253
DE++L+K++++ P +KK
Sbjct: 179 RKIDERLLQKIIAK-PTNKIKK 199
>TAIR|locus:2080315 [details] [associations]
symbol:AT3G54120 "AT3G54120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005789 EMBL:AL132957
PANTHER:PTHR10994 UniGene:At.25009 UniGene:At.68442
HOGENOM:HOG000237479 EMBL:BT010698 EMBL:BT010978 EMBL:AK229371
IPI:IPI00519528 PIR:T47571 RefSeq:NP_190980.1
ProteinModelPortal:Q9M392 IntAct:Q9M392 EnsemblPlants:AT3G54120.1
GeneID:824579 KEGG:ath:AT3G54120 TAIR:At3g54120 eggNOG:NOG256441
InParanoid:Q9M392 OMA:LWAKAAR PhylomeDB:Q9M392
ProtClustDB:CLSN2685077 Genevestigator:Q9M392 Uniprot:Q9M392
Length = 203
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 62/167 (37%), Positives = 101/167 (60%)
Query: 50 RLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI 109
+LF R++ IH +LG G AD+ LWR K +S G++ A W++FE Y + TL+ + +
Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLL 66
Query: 110 LSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDL 169
L L++LFLWS +++ +N+ P +P + E E + LR +N+ L V +IA RD
Sbjct: 67 LLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDS 126
Query: 170 KKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKI 216
+ + V L+LLS++G+ +F TL + +++ TVP YE+YED I
Sbjct: 127 ELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>TAIR|locus:1005716554 [details] [associations]
symbol:AT3G10915 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 EMBL:CP002686 PANTHER:PTHR10994 IPI:IPI00938902
RefSeq:NP_001154603.1 UniGene:At.44168 ProteinModelPortal:F4J500
EnsemblPlants:AT3G10915.5 GeneID:820262 KEGG:ath:AT3G10915
OMA:HDITLGK Uniprot:F4J500
Length = 249
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 55/189 (29%), Positives = 98/189 (51%)
Query: 68 ADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINK 127
AD+ LWR + +S GV+ +T W++FE +++ + ++ + + F+ + S F N+
Sbjct: 64 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 123
Query: 128 SPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLG-VIAGLWLLSIVG 186
+P + L E+ V A++ R ++N L + ++ G D + F V+ LWLLS +G
Sbjct: 124 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 183
Query: 187 NWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRI 246
++ + TL YI +L T+P +Y KY+ K+D + Y + DE V+ SR+
Sbjct: 184 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVI----SRL 239
Query: 247 PKGALKKKD 255
K KD
Sbjct: 240 SWSLSKDKD 248
>TAIR|locus:2046783 [details] [associations]
symbol:RTNLB13 "AT2G23640" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0071458 "integral to cytosolic side of
endoplasmic reticulum membrane" evidence=IDA] [GO:0071782
"endoplasmic reticulum tubular network" evidence=IDA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:AC003040
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004482 GO:GO:0071458
PANTHER:PTHR10994 GO:GO:0071786 GO:GO:0071782 EMBL:BX822075
IPI:IPI00527827 PIR:T01153 RefSeq:NP_565555.1 UniGene:At.50091
ProteinModelPortal:O64837 STRING:O64837 PaxDb:O64837 PRIDE:O64837
EnsemblPlants:AT2G23640.1 GeneID:816896 KEGG:ath:AT2G23640
TAIR:At2g23640 eggNOG:NOG307342 HOGENOM:HOG000154223
InParanoid:O64837 OMA:WMFRVGA PhylomeDB:O64837
ProtClustDB:CLSN2688372 Genevestigator:O64837 Uniprot:O64837
Length = 206
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 52/185 (28%), Positives = 97/185 (52%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKS 128
DI+LWR KK++ L +T+ W+L + IT+V I I ++++FLW + ++K
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 129 PPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNW 188
PE+ + + E+FV+E + R + + + + + + F + G W+LS +GN
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 189 CNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPK 248
+F T +I V+ TVP ++E+Y D+I + K Y EK+L+ + +++
Sbjct: 138 LDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILE-MKNKLHH 196
Query: 249 GALKK 253
G +K
Sbjct: 197 GTEEK 201
>TAIR|locus:2090609 [details] [associations]
symbol:AT3G19460 "AT3G19460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 EMBL:CP002686 EMBL:AB025624
PANTHER:PTHR10994 HOGENOM:HOG000237479 IPI:IPI00846973
RefSeq:NP_001078186.1 UniGene:At.38403 ProteinModelPortal:A8MR23
PRIDE:A8MR23 EnsemblPlants:AT3G19460.2 GeneID:821480
KEGG:ath:AT3G19460 OMA:RHINTIV ProtClustDB:CLSN2688563
Genevestigator:A8MR23 Uniprot:A8MR23
Length = 218
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 44/137 (32%), Positives = 80/137 (58%)
Query: 68 ADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINK 127
AD+ LWRN+ + +L +T W LFE Y+L++ V ++ +L +A+ FLW+ ++T +N+
Sbjct: 7 ADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNR 66
Query: 128 SPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG-LWLLSIVG 186
P +P + +PE+F + A LR IN L++ +I R+ + L V LW +I
Sbjct: 67 PLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQ-TIC- 124
Query: 187 NWCNFVTLFYIVFVLLH 203
C F+ L +++++ +H
Sbjct: 125 --CIFLFL-HVMYLTVH 138
>UNIPROTKB|F1RPY3 [details] [associations]
symbol:RTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 OMA:VMWLLTY EMBL:FP089542
EMBL:AEMK01195949 Ensembl:ENSSSCT00000014266 Uniprot:F1RPY3
Length = 236
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 51/196 (26%), Positives = 101/196 (51%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 50 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 107
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A IN+AL ++ + DL L +
Sbjct: 108 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINKALKLIIRLFLVEDLVDSLKLAVF 167
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ +VPV+YEKY+ +ID + + I + + +
Sbjct: 168 MWLMTYVGAVFNGITLLILAELLIFSVPVVYEKYKTQIDHY-----VGIARDQT---KSI 219
Query: 239 LKKVLSRIPKGALKKK 254
++K+ +++P G KKK
Sbjct: 220 VEKIQAKVP-GIAKKK 234
>UNIPROTKB|Q08D83 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9913 "Bos taurus"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG000838
HOGENOM:HOG000015254 EMBL:BT030534 EMBL:BC123892 EMBL:BC149634
EMBL:BK001797 IPI:IPI00687234 IPI:IPI00837997 RefSeq:NP_872598.1
UniGene:Bt.16079 ProteinModelPortal:Q08D83 SMR:Q08D83 PRIDE:Q08D83
GeneID:359721 KEGG:bta:359721 CTD:10313 eggNOG:NOG303514
InParanoid:Q08D83 OrthoDB:EOG4229M0 NextBio:20812750 Uniprot:Q08D83
Length = 256
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 50/196 (25%), Positives = 101/196 (51%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 70 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 127
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 128 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 187
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ ++P++YEKY+ +ID + + I + + +
Sbjct: 188 MWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHY-----VGIARDQT---KSI 239
Query: 239 LKKVLSRIPKGALKKK 254
++K+ +++P G KKK
Sbjct: 240 VEKIQAKLP-GIAKKK 254
>UNIPROTKB|J9P9U4 [details] [associations]
symbol:J9P9U4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:IICPYNI
EMBL:AAEX03011658 EMBL:AAEX03011657 Ensembl:ENSCAFT00000043047
Uniprot:J9P9U4
Length = 296
Score = 174 (66.3 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 51/196 (26%), Positives = 101/196 (51%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 110 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 167
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 168 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 227
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ +VP++YEKY+ +ID + + I + + +
Sbjct: 228 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHY-----VGIARDQT---KSI 279
Query: 239 LKKVLSRIPKGALKKK 254
++K+ +++P G KKK
Sbjct: 280 VEKIQAKLP-GIAKKK 294
>ZFIN|ZDB-GENE-030710-3 [details] [associations]
symbol:rtn1b "reticulon 1b" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-3 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG008971 HOGENOM:HOG000134444 EMBL:AY555034
IPI:IPI00650731 UniGene:Dr.673 ProteinModelPortal:Q4G5W7 SMR:Q4G5W7
PRIDE:Q4G5W7 InParanoid:Q4G5W7 ArrayExpress:Q4G5W7 Bgee:Q4G5W7
Uniprot:Q4G5W7
Length = 767
Score = 179 (68.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 50/183 (27%), Positives = 93/183 (50%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLA--VLF-LWSNAS 122
K ++ WR+ K S V G M LF L ++ ++++V ++++ SL+ + F ++ +
Sbjct: 579 KAMELLYWRDLKKSGLVFGSLLLM--LFSLTQFSVVSVVAYLALASLSATISFRVYKSVL 636
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
+ K+ P ++L + ++A ++Y IN L LR + +DL L
Sbjct: 637 QAVQKTDEGHPFKVYLDVEMSLSHDQMQKYAENVQYYINSTLKELRRLFLVQDLVDSLKF 696
Query: 176 IAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFD 235
+WLL+ VG N +TL +V V + ++PV+YEKY+ +ID + + ++ A
Sbjct: 697 AVLMWLLTYVGALFNGLTLLIMVVVCMFSMPVVYEKYQAQIDQYVDLIRTQVNSVVAKIQ 756
Query: 236 EKV 238
EKV
Sbjct: 757 EKV 759
>UNIPROTKB|D4A1U2 [details] [associations]
symbol:Rtn3 "Reticulon 3, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0005783 EMBL:CH473953 PANTHER:PTHR10994
UniGene:Rn.11652 IPI:IPI00562895 Ensembl:ENSRNOT00000046063
Uniprot:D4A1U2
Length = 256
Score = 169 (64.5 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 50/209 (23%), Positives = 106/209 (50%)
Query: 56 KPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLA 113
+P+ + + D+ WR+ K + V G T + +L L + +I++V ++ ++LS+
Sbjct: 58 QPVS-IFSTSQVHDLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVT 114
Query: 114 VLF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIAS 165
+ F ++ + + KS P +TL + + +A +N+AL ++ +
Sbjct: 115 ISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFL 174
Query: 166 GRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATI 225
DL L + +WL++ VG N +TL + +L+ +VP++YEKY+ +ID + +
Sbjct: 175 VEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHY-----V 229
Query: 226 EIKKQYAVFDEKVLKKVLSRIPKGALKKK 254
I + + +++K+ +++P G KKK
Sbjct: 230 GIARDQT---KSIVEKIQAKLP-GIAKKK 254
>UNIPROTKB|E1BUW7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00821143 Ensembl:ENSGALT00000040236 ArrayExpress:E1BUW7
Uniprot:E1BUW7
Length = 347
Score = 170 (64.9 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 52/201 (25%), Positives = 97/201 (48%)
Query: 48 VFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI 107
+F L +P+ H AG D+ WR+ K GV+ GA+ +++L L + ++++ +I
Sbjct: 142 LFALPATSEPLMHS-SAGNIVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYI 198
Query: 108 SI--LSLAVLF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRAL 157
++ LS+ + F ++ I KS P V + E+ + +++S + IN +
Sbjct: 199 ALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTV 258
Query: 158 AVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKID 217
LR + DL L +W+ + VG N +TL + + L +VPVIYE+++ +ID
Sbjct: 259 KELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQID 318
Query: 218 SFGEKATIEIKKQYAVFDEKV 238
+ +K A K+
Sbjct: 319 HYLGLVNKNVKDAMAKIQAKI 339
>UNIPROTKB|A8MT72 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 HGNC:HGNC:10467 ChiTaRS:RTN1
HOGENOM:HOG000015254 EMBL:AL121694 EMBL:AL133299 EMBL:AL139194
IPI:IPI00794113 ProteinModelPortal:A8MT72 SMR:A8MT72 STRING:A8MT72
PRIDE:A8MT72 Ensembl:ENST00000395090 UCSC:uc010apl.2
ArrayExpress:A8MT72 Bgee:A8MT72 Uniprot:A8MT72
Length = 193
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 43/164 (26%), Positives = 88/164 (53%)
Query: 67 PA-DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNAS 122
PA D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ +
Sbjct: 5 PAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 62
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
+ K+ P +TL ++ + ++ L++ +N L LR + +DL L
Sbjct: 63 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 122
Query: 176 IAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+WLL+ VG N +TL + V + T+PV+Y K++ +ID +
Sbjct: 123 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQY 166
>UNIPROTKB|F5H774 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AP006289 PANTHER:PTHR10994 CTD:10313 EMBL:AP000753
RefSeq:NP_001252519.1 UniGene:Hs.473761 GeneID:10313 KEGG:hsa:10313
HGNC:HGNC:10469 ChiTaRS:RTN3 IPI:IPI01009279
ProteinModelPortal:F5H774 SMR:F5H774 Ensembl:ENST00000540798
UCSC:uc009yov.3 ArrayExpress:F5H774 Bgee:F5H774 Uniprot:F5H774
Length = 920
Score = 174 (66.3 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 51/196 (26%), Positives = 101/196 (51%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 734 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 791
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 792 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 851
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ +VP++YEKY+ +ID + + I + + +
Sbjct: 852 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHY-----VGIARDQT---KSI 903
Query: 239 LKKVLSRIPKGALKKK 254
++K+ +++P G KKK
Sbjct: 904 VEKIQAKLP-GIAKKK 918
>UNIPROTKB|Q1LZ76 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:DAAA02029288
EMBL:DAAA02029289 EMBL:BC116162 IPI:IPI00904153 UniGene:Bt.22982
SMR:Q1LZ76 STRING:Q1LZ76 Ensembl:ENSBTAT00000015218
NextBio:20875732 Uniprot:Q1LZ76
Length = 208
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 41/161 (25%), Positives = 86/161 (53%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
K+ P +TL ++ + ++ L++ +N L LR + +DL L
Sbjct: 81 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+WLL+ VG N +TL + V + T+PV+Y K++ +ID +
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQY 181
>UNIPROTKB|F1PNX5 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:DPKKSGI
EMBL:AAEX03005762 Ensembl:ENSCAFT00000024693 Uniprot:F1PNX5
Length = 208
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 41/161 (25%), Positives = 86/161 (53%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
K+ P +TL ++ + ++ L++ +N L LR + +DL L
Sbjct: 81 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+WLL+ VG N +TL + V + T+PV+Y K++ +ID +
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQY 181
>UNIPROTKB|O95197 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0071786 "endoplasmic
reticulum tubular network organization" evidence=IMP] [GO:0005615
"extracellular space" evidence=TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 GO:GO:0016021 GO:GO:0006915
GO:GO:0019048 GO:GO:0005615 GO:GO:0000139 GO:GO:0006950
GO:GO:0016192 GO:GO:0005789 EMBL:CH471076 EMBL:AP006289
PANTHER:PTHR10994 GO:GO:0071786 CTD:10313 eggNOG:NOG303514
EMBL:AF059524 EMBL:AF059529 EMBL:AF059525 EMBL:AF059526
EMBL:AF059527 EMBL:AF059528 EMBL:AF119297 EMBL:AY427821
EMBL:AY750848 EMBL:AP000753 EMBL:AK297529 EMBL:AB209771
EMBL:AK075412 EMBL:AK222898 EMBL:AK295361 EMBL:BC000634
EMBL:BC010556 EMBL:BC011394 EMBL:BC022993 EMBL:BC100822
EMBL:BC100823 EMBL:BC105981 EMBL:BC105982 EMBL:BC118628
EMBL:BC118550 EMBL:BK001685 EMBL:BK001681 EMBL:BK001684
IPI:IPI00028946 IPI:IPI00394896 IPI:IPI00398795 IPI:IPI00412154
IPI:IPI00743293 RefSeq:NP_001252518.1 RefSeq:NP_001252519.1
RefSeq:NP_001252520.1 RefSeq:NP_006045.1 RefSeq:NP_958831.1
RefSeq:NP_958832.1 RefSeq:NP_958833.1 UniGene:Hs.473761
ProteinModelPortal:O95197 SMR:O95197 IntAct:O95197 STRING:O95197
PhosphoSite:O95197 PaxDb:O95197 PRIDE:O95197 DNASU:10313
Ensembl:ENST00000339997 Ensembl:ENST00000341307
Ensembl:ENST00000354497 Ensembl:ENST00000356000
Ensembl:ENST00000377819 Ensembl:ENST00000537981 GeneID:10313
KEGG:hsa:10313 UCSC:uc001nxm.3 UCSC:uc001nxn.3 UCSC:uc001nxo.3
UCSC:uc001nxp.3 UCSC:uc001nxq.3 GeneCards:GC11P063448
H-InvDB:HIX0021346 HGNC:HGNC:10469 HPA:HPA015649 HPA:HPA015650
MIM:604249 neXtProt:NX_O95197 PharmGKB:PA34882 HOVERGEN:HBG093922
InParanoid:O95197 OMA:KGRISTW ChiTaRS:RTN3 GenomeRNAi:10313
NextBio:39085 ArrayExpress:O95197 Bgee:O95197 Genevestigator:O95197
GermOnline:ENSG00000133318 Uniprot:O95197
Length = 1032
Score = 174 (66.3 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 51/196 (26%), Positives = 101/196 (51%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 846 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 903
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 904 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 963
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ +VP++YEKY+ +ID + + I + + +
Sbjct: 964 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHY-----VGIARDQT---KSI 1015
Query: 239 LKKVLSRIPKGALKKK 254
++K+ +++P G KKK
Sbjct: 1016 VEKIQAKLP-GIAKKK 1030
>UNIPROTKB|I3LBH0 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 CTD:6252 GeneTree:ENSGT00390000009934
EMBL:CU469078 EMBL:FP340567 UniGene:Ssc.13916 GeneID:100152394
KEGG:ssc:100152394 RefSeq:NP_001231570.1 RefSeq:XP_003480527.1
ProteinModelPortal:I3LBH0 SMR:I3LBH0 Ensembl:ENSSSCT00000032115
Uniprot:I3LBH0
Length = 208
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 41/161 (25%), Positives = 86/161 (53%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
K+ P +TL ++ + ++ L++ +N L LR + +DL L
Sbjct: 81 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+WLL+ VG N +TL + V + T+PV+Y K++ +ID +
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQY 181
>UNIPROTKB|F1PVP5 [details] [associations]
symbol:F1PVP5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03011658
EMBL:AAEX03011657 Ensembl:ENSCAFT00000023909 Uniprot:F1PVP5
Length = 1042
Score = 172 (65.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 51/197 (25%), Positives = 101/197 (51%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 855 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 912
Query: 126 NKSPPEIPV--------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIA 177
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 913 QKSEEGHPFKRAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 972
Query: 178 GLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEK 237
+WL++ VG N +TL + +L+ +VP++YEKY+ +ID + + I + +
Sbjct: 973 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHY-----VGIARDQT---KS 1024
Query: 238 VLKKVLSRIPKGALKKK 254
+++K+ +++P G KKK
Sbjct: 1025 IVEKIQAKLP-GIAKKK 1040
>UNIPROTKB|Q7YRW9 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
UniGene:Bt.105155 GeneID:359718 KEGG:bta:359718 NextBio:20812748
EMBL:BC116111 EMBL:AY164744 IPI:IPI00718559 RefSeq:NP_001068606.1
SMR:Q7YRW9 STRING:Q7YRW9 Ensembl:ENSBTAT00000014744 Uniprot:Q7YRW9
Length = 199
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 47/183 (25%), Positives = 90/183 (49%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNAS 122
K D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 68
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
I KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 69 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 128
Query: 176 IAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFD 235
+W+ + VG N +TL + + L +VPVIYE+++ +ID + A +K A
Sbjct: 129 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQ 188
Query: 236 EKV 238
K+
Sbjct: 189 AKI 191
>UNIPROTKB|Q6IM70 [details] [associations]
symbol:RTN4 "RTN4-C" species:9823 "Sus scrofa" [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 eggNOG:NOG306139 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 OMA:NWKCQAI EMBL:CU929931
EMBL:CU928339 EMBL:BK001795 RefSeq:NP_001123435.1 UniGene:Ssc.94392
SMR:Q6IM70 STRING:Q6IM70 Ensembl:ENSSSCT00000009205
GeneID:100170118 KEGG:ssc:100170118 Uniprot:Q6IM70
Length = 199
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 47/183 (25%), Positives = 90/183 (49%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNAS 122
K D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 68
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
I KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 69 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 128
Query: 176 IAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFD 235
+W+ + VG N +TL + + L +VPVIYE+++ +ID + A +K A
Sbjct: 129 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQ 188
Query: 236 EKV 238
K+
Sbjct: 189 AKI 191
>UNIPROTKB|F1NCK0 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00820463 Ensembl:ENSGALT00000013195 ArrayExpress:F1NCK0
Uniprot:F1NCK0
Length = 199
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 47/183 (25%), Positives = 89/183 (48%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNAS 122
K D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 68
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
I KS P V + E+ + +++S + IN + LR + DL L
Sbjct: 69 QAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKF 128
Query: 176 IAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFD 235
+W+ + VG N +TL + + L +VPVIYE+++ +ID + +K A
Sbjct: 129 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQ 188
Query: 236 EKV 238
K+
Sbjct: 189 AKI 191
>UNIPROTKB|H7C106 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 ProteinModelPortal:H7C106 PRIDE:H7C106
Ensembl:ENST00000438462 OMA:NWKCQAI Uniprot:H7C106
Length = 203
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 47/181 (25%), Positives = 89/181 (49%)
Query: 63 GAGKPA-DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LW 118
G P D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++
Sbjct: 24 GPWSPVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIY 81
Query: 119 SNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKK 171
I KS P V + E+ V +++++ +N + LR + DL
Sbjct: 82 KGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVD 141
Query: 172 FLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQY 231
L +W+ + VG N +TL + + L +VPVIYE+++ +ID + A +K
Sbjct: 142 SLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAM 201
Query: 232 A 232
A
Sbjct: 202 A 202
>RGD|620988 [details] [associations]
symbol:Rtn3 "reticulon 3" species:10116 "Rattus norvegicus"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization"
evidence=IEA;ISO] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
CTD:10313 eggNOG:NOG303514 HOVERGEN:HBG093922 EMBL:AY164698
EMBL:AY496443 EMBL:AF442357 EMBL:AF442358 EMBL:BC062068
EMBL:BC107448 IPI:IPI00421904 IPI:IPI00564622 RefSeq:NP_001009953.2
RefSeq:NP_543185.2 UniGene:Rn.11652 ProteinModelPortal:Q6RJR6
SMR:Q6RJR6 IntAct:Q6RJR6 STRING:Q6RJR6 PRIDE:Q6RJR6
Ensembl:ENSRNOT00000028785 Ensembl:ENSRNOT00000049812 GeneID:140945
KEGG:rno:140945 UCSC:RGD:620988 HOGENOM:HOG000154220 NextBio:620854
ArrayExpress:Q6RJR6 Genevestigator:Q6RJR6 Uniprot:Q6RJR6
Length = 940
Score = 168 (64.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/196 (25%), Positives = 101/196 (51%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 754 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 811
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A +N+AL ++ + DL L +
Sbjct: 812 QKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 871
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ +VP++YEKY+ +ID + + I + + +
Sbjct: 872 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHY-----VGIARDQT---KSI 923
Query: 239 LKKVLSRIPKGALKKK 254
++K+ +++P G KKK
Sbjct: 924 VEKIQAKLP-GIAKKK 938
>MGI|MGI:1339970 [details] [associations]
symbol:Rtn3 "reticulon 3" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=ISO]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1339970
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 CTD:10313 eggNOG:NOG303514
OrthoDB:EOG4229M0 HOVERGEN:HBG093922 ChiTaRS:RTN3 EMBL:AB046114
EMBL:BK001796 EMBL:AY164700 EMBL:AY507126 EMBL:AY507127
EMBL:AY427822 EMBL:AY750849 EMBL:AF195940 EMBL:AK032109
EMBL:AK036892 EMBL:AK049845 EMBL:AK075883 EMBL:AK088670
EMBL:AK146505 EMBL:AK148792 EMBL:AK148947 EMBL:AK165683
EMBL:BC014697 EMBL:BC036717 EMBL:BC079882 IPI:IPI00112948
IPI:IPI00470981 IPI:IPI00474993 IPI:IPI00480414 IPI:IPI00750847
RefSeq:NP_001003933.1 RefSeq:NP_001003934.1 RefSeq:NP_001258415.1
RefSeq:NP_001258416.1 RefSeq:NP_444306.1 UniGene:Mm.246990
ProteinModelPortal:Q9ES97 SMR:Q9ES97 IntAct:Q9ES97 STRING:Q9ES97
PhosphoSite:Q9ES97 PaxDb:Q9ES97 PRIDE:Q9ES97
Ensembl:ENSMUST00000025667 Ensembl:ENSMUST00000065304
Ensembl:ENSMUST00000088169 Ensembl:ENSMUST00000088171 GeneID:20168
KEGG:mmu:20168 UCSC:uc008glb.1 UCSC:uc008gld.1 UCSC:uc008gle.1
UCSC:uc012bhv.1 InParanoid:Q9ES97 OMA:LTRQFSH NextBio:297685
Bgee:Q9ES97 CleanEx:MM_RTN3 Genevestigator:Q9ES97
GermOnline:ENSMUSG00000024758 Uniprot:Q9ES97
Length = 964
Score = 168 (64.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 49/196 (25%), Positives = 101/196 (51%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 778 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 835
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A +N+AL ++ + DL L +
Sbjct: 836 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 895
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ +VP++YEKY+ +ID + + I + + +
Sbjct: 896 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHY-----VGIARDQT---KSI 947
Query: 239 LKKVLSRIPKGALKKK 254
++K+ +++P G KKK
Sbjct: 948 VEKIQAKLP-GIAKKK 962
>UNIPROTKB|F1NH22 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02003912
EMBL:AADN02003911 IPI:IPI00583109 Ensembl:ENSGALT00000019594
ArrayExpress:F1NH22 Uniprot:F1NH22
Length = 208
Score = 151 (58.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 46/197 (23%), Positives = 101/197 (51%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
++ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ + +
Sbjct: 23 NLLYWRDIK-QTGIVFGSLLL-LLFSLTQFSVVSVVAYLALAGLSATISFRIYKSVLQAV 80
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
K+ P + L + + ++ L+ +N + LR + +DL L
Sbjct: 81 QKTDEGHPFKAYLDMEMNLSQDQIQKYTDCLQLYVNSTVKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WLL+ VG N +TL + V + T+PV+Y+KY+ +ID + + + + + V
Sbjct: 141 MWLLTYVGALFNGLTLLIMAVVSMFTLPVVYDKYQAQIDQY-----LGLVRTHI---NTV 192
Query: 239 LKKVLSRIPKGALKKKD 255
+ K+ ++IP GA +K +
Sbjct: 193 VAKIQAKIP-GAKRKAE 208
>ZFIN|ZDB-GENE-030710-2 [details] [associations]
symbol:rtn4b "reticulon 4b" species:7955 "Danio
rerio" [GO:0005199 "structural constituent of cell wall"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 InterPro:IPR003882 Pfam:PF02453 PRINTS:PR01218
PROSITE:PS50845 ZFIN:ZDB-GENE-030710-2 GO:GO:0005783 GO:GO:0005199
PANTHER:PTHR10994 EMBL:AY555051 IPI:IPI00650525
RefSeq:NP_001035425.1 UniGene:Dr.79909 ProteinModelPortal:Q4G5V0
PRIDE:Q4G5V0 GeneID:678586 KEGG:dre:678586 CTD:678586
HOVERGEN:HBG096757 InParanoid:Q4G5V0 NextBio:20902411 Bgee:Q4G5V0
Uniprot:Q4G5V0
Length = 875
Score = 166 (63.5 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 68/216 (31%), Positives = 96/216 (44%)
Query: 57 PIHHVLGAGKPAD------IFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISIL 110
P H GA PAD + WR+ + SA VLG + +LF L + V S L
Sbjct: 674 PAGHTAGA--PADPTAVLQLLYWRDVRASALVLGSLLLL-LLF--LSCCSVISVLSYSAL 728
Query: 111 SLAVLFLWSNASTFI----NKSPPEIPVVTLPEKFVLEFASA-------LRYEINRALAV 159
L L L + T + K+ P E+ VL A A L IN AL
Sbjct: 729 CLLTLTLSTRVFTAVLQAMRKTEDGHPFRQYLERDVLLSADAVHTHSEALLRRINTALVE 788
Query: 160 LREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
LR + DL L + GLWLL+ VG+W N +TL I + + P+ YE+++ +ID F
Sbjct: 789 LRRLFLVEDLVDSLKLAVGLWLLTYVGSWFNGLTLLIIALIGAFSGPIAYERHQSEIDQF 848
Query: 220 GEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKKD 255
++++ L KVL+ +P G KK D
Sbjct: 849 ISMINTQMRE--------ALGKVLAMVP-GGKKKSD 875
>UNIPROTKB|E1BP30 [details] [associations]
symbol:E1BP30 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:DAAA02029288 EMBL:DAAA02029289
IPI:IPI00924046 Ensembl:ENSBTAT00000061568 ArrayExpress:E1BP30
Uniprot:E1BP30
Length = 697
Score = 165 (63.1 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 43/168 (25%), Positives = 88/168 (52%)
Query: 62 LGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LW 118
L K D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++
Sbjct: 505 LNKQKAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIY 562
Query: 119 SNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKK 171
+ + K+ P +TL ++ + ++ L++ +N L LR + +DL
Sbjct: 563 KSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVD 622
Query: 172 FLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
L +WLL+ VG N +TL + V + T+PV+Y K++ +ID +
Sbjct: 623 SLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQY 670
>ZFIN|ZDB-GENE-030710-5 [details] [associations]
symbol:rtn3 "reticulon 3" species:7955 "Danio rerio"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-5 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 eggNOG:NOG303514 OrthoDB:EOG4229M0
EMBL:CT030012 EMBL:CU457795 EMBL:AY555038 IPI:IPI00774300
RefSeq:XP_003198973.1 UniGene:Dr.130204 SMR:Q4G5W3
Ensembl:ENSDART00000041088 Ensembl:ENSDART00000124244
GeneID:100538268 KEGG:dre:100538268 InParanoid:Q4G5W3
Uniprot:Q4G5W3
Length = 236
Score = 155 (59.6 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 49/180 (27%), Positives = 88/180 (48%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K S GV+ G + + +L L + +I++V ++ S+L + + F ++ + +
Sbjct: 49 DLVHWRDPKKS-GVVFGVSLL-LLLSLAAFSVISVVSYLLLSLLCVTISFRIYKSVIQAV 106
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P VT+P + + +NRAL + + DL L +
Sbjct: 107 QKSNEGHPFKALMDKDVTVPPETFRKHVDGCLSHVNRALKQMSRLFLVEDLVDSLKLAVV 166
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WLL+ VG N +T+ + +LL +VP IYEK + +ID + + A + A EK+
Sbjct: 167 MWLLTYVGAVFNGITILILADILLFSVPPIYEKNKTQIDHYIDIARTQFNTTVAKLQEKL 226
>UNIPROTKB|I3L6J1 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 CTD:6252 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:CU469078 EMBL:FP340567
RefSeq:NP_001231569.1 RefSeq:XP_003480528.1 UniGene:Ssc.13916
Ensembl:ENSSSCT00000022854 GeneID:100152394 KEGG:ssc:100152394
Uniprot:I3L6J1
Length = 770
Score = 164 (62.8 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 43/168 (25%), Positives = 88/168 (52%)
Query: 62 LGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LW 118
L K D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++
Sbjct: 578 LNKQKAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIY 635
Query: 119 SNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKK 171
+ + K+ P +TL ++ + ++ L++ +N L LR + +DL
Sbjct: 636 KSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVD 695
Query: 172 FLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
L +WLL+ VG N +TL + V + T+PV+Y K++ +ID +
Sbjct: 696 SLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQY 743
>UNIPROTKB|Q16799 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0030182
"neuron differentiation" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 EMBL:CH471061 GO:GO:0030182 GO:GO:0004871
GO:GO:0030176 PANTHER:PTHR10994 HOVERGEN:HBG008971 EMBL:L10333
EMBL:L10334 EMBL:L10335 EMBL:BC090862 EMBL:BC000314 EMBL:BC003003
IPI:IPI00003971 IPI:IPI00219812 IPI:IPI00219813 PIR:A46583
PIR:I60904 RefSeq:NP_066959.1 RefSeq:NP_996734.1 UniGene:Hs.368626
ProteinModelPortal:Q16799 SMR:Q16799 IntAct:Q16799 MINT:MINT-154554
STRING:Q16799 PhosphoSite:Q16799 DMDM:12643733 PaxDb:Q16799
PRIDE:Q16799 Ensembl:ENST00000267484 Ensembl:ENST00000342503
GeneID:6252 KEGG:hsa:6252 UCSC:uc001xek.2 UCSC:uc001xem.1
UCSC:uc001xen.1 CTD:6252 GeneCards:GC14M060062 HGNC:HGNC:10467
HPA:CAB002745 MIM:600865 neXtProt:NX_Q16799 PharmGKB:PA34880
eggNOG:NOG306139 HOGENOM:HOG000134444 InParanoid:Q16799 OMA:PFLNKQK
OrthoDB:EOG437RDX PhylomeDB:Q16799 ChiTaRS:RTN1 GenomeRNAi:6252
NextBio:24277 ArrayExpress:Q16799 Bgee:Q16799 CleanEx:HS_RTN1
Genevestigator:Q16799 GermOnline:ENSG00000139970 Uniprot:Q16799
Length = 776
Score = 164 (62.8 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 43/168 (25%), Positives = 88/168 (52%)
Query: 62 LGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LW 118
L K D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++
Sbjct: 584 LNKQKAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIY 641
Query: 119 SNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKK 171
+ + K+ P +TL ++ + ++ L++ +N L LR + +DL
Sbjct: 642 KSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVD 701
Query: 172 FLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
L +WLL+ VG N +TL + V + T+PV+Y K++ +ID +
Sbjct: 702 SLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQY 749
>UNIPROTKB|Q6IFY7 [details] [associations]
symbol:rtn1-a "Reticulon-1-A" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY182251
EMBL:CD360654 EMBL:BK004007 RefSeq:NP_001089006.1 UniGene:Xl.24060
ProteinModelPortal:Q6IFY7 SMR:Q6IFY7 GeneID:496390 KEGG:xla:496390
CTD:496390 Xenbase:XB-GENE-6252069 HOVERGEN:HBG000838
Uniprot:Q6IFY7
Length = 207
Score = 149 (57.5 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 38/161 (23%), Positives = 85/161 (52%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K G++ G+ + +LF L+++ +++++ ++++ LS + F ++ + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSVLL-MLFSLIQFSVVSVMAYLALAALSATISFRIYKSVLQAV 80
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
K+ P ++L ++ + ++ L+ N LR + +DL L
Sbjct: 81 QKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDSLKFAVL 140
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+WLL+ VG N +TL + V + ++PV+Y+KY+ +ID +
Sbjct: 141 MWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQY 181
>UNIPROTKB|F1P5B2 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00594028 Ensembl:ENSGALT00000040233 ArrayExpress:F1P5B2
Uniprot:F1P5B2
Length = 344
Score = 159 (61.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 50/201 (24%), Positives = 96/201 (47%)
Query: 48 VFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI 107
+F L +P+ H + D+ WR+ K GV+ GA+ +++L L + ++++ +I
Sbjct: 141 LFALPATSEPLMH---SSAVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYI 195
Query: 108 SI--LSLAVLF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRAL 157
++ LS+ + F ++ I KS P V + E+ + +++S + IN +
Sbjct: 196 ALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTV 255
Query: 158 AVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKID 217
LR + DL L +W+ + VG N +TL + + L +VPVIYE+++ +ID
Sbjct: 256 KELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQID 315
Query: 218 SFGEKATIEIKKQYAVFDEKV 238
+ +K A K+
Sbjct: 316 HYLGLVNKNVKDAMAKIQAKI 336
>UNIPROTKB|F1P5B1 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00823248 Ensembl:ENSGALT00000040235 ArrayExpress:F1P5B1
Uniprot:F1P5B1
Length = 326
Score = 157 (60.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 49/194 (25%), Positives = 93/194 (47%)
Query: 56 KPIHHVLGAGKPA-DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSL 112
+P V +G D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+
Sbjct: 127 EPRRRVSSSGSAVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSV 184
Query: 113 AVLF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIA 164
+ F ++ I KS P V + E+ + +++S + IN + LR +
Sbjct: 185 TISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLF 244
Query: 165 SGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKAT 224
DL L +W+ + VG N +TL + + L +VPVIYE+++ +ID +
Sbjct: 245 LVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVN 304
Query: 225 IEIKKQYAVFDEKV 238
+K A K+
Sbjct: 305 KNVKDAMAKIQAKI 318
>UNIPROTKB|F1Q231 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000024697 Uniprot:F1Q231
Length = 704
Score = 161 (61.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 41/161 (25%), Positives = 86/161 (53%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ + +
Sbjct: 519 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 576
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
K+ P +TL ++ + ++ L++ +N L LR + +DL L
Sbjct: 577 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 636
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+WLL+ VG N +TL + V + T+PV+Y K++ +ID +
Sbjct: 637 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQY 677
>UNIPROTKB|F1Q2B3 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000039479 Uniprot:F1Q2B3
Length = 715
Score = 161 (61.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 41/161 (25%), Positives = 86/161 (53%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ + +
Sbjct: 524 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 581
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
K+ P +TL ++ + ++ L++ +N L LR + +DL L
Sbjct: 582 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 641
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+WLL+ VG N +TL + V + T+PV+Y K++ +ID +
Sbjct: 642 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQY 682
>UNIPROTKB|F8W914 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01011809
ProteinModelPortal:F8W914 SMR:F8W914 Ensembl:ENST00000402434
ArrayExpress:F8W914 Bgee:F8W914 Uniprot:F8W914
Length = 345
Score = 154 (59.3 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 46/180 (25%), Positives = 89/180 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 160 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 217
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 218 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 277
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L +VPVIYE+++ +ID + A +K A K+
Sbjct: 278 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 337
>UNIPROTKB|F1NH23 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0030182 "neuron differentiation" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 OMA:PFLNKQK GeneTree:ENSGT00390000009934
EMBL:AADN02003912 EMBL:AADN02003911 IPI:IPI00586633
Ensembl:ENSGALT00000019593 ArrayExpress:F1NH23 Uniprot:F1NH23
Length = 760
Score = 158 (60.7 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 49/209 (23%), Positives = 105/209 (50%)
Query: 57 PIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAV 114
P+ L K ++ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS +
Sbjct: 563 PLLPFLNKQKAINLLYWRDIK-QTGIVFGSLLL-LLFSLTQFSVVSVVAYLALAGLSATI 620
Query: 115 LF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASG 166
F ++ + + K+ P + L + + ++ L+ +N + LR +
Sbjct: 621 SFRIYKSVLQAVQKTDEGHPFKAYLDMEMNLSQDQIQKYTDCLQLYVNSTVKELRRLFLV 680
Query: 167 RDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIE 226
+DL L +WLL+ VG N +TL + V + T+PV+Y+KY+ +ID + +
Sbjct: 681 QDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFTLPVVYDKYQAQIDQY-----LG 735
Query: 227 IKKQYAVFDEKVLKKVLSRIPKGALKKKD 255
+ + + V+ K+ ++IP GA +K +
Sbjct: 736 LVRTHI---NTVVAKIQAKIP-GAKRKAE 760
>RGD|620986 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=ISO] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 RGD:620986 GO:GO:0016021 GO:GO:0030182
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252
eggNOG:NOG306139 OrthoDB:EOG437RDX GeneTree:ENSGT00390000009934
EMBL:U17604 EMBL:U17603 IPI:IPI00213559 IPI:IPI00231126
RefSeq:NP_446317.1 UniGene:Rn.55126 ProteinModelPortal:Q64548
SMR:Q64548 STRING:Q64548 PRIDE:Q64548 Ensembl:ENSRNOT00000006373
GeneID:116644 KEGG:rno:116644 UCSC:RGD:620986 HOGENOM:HOG000015254
NextBio:619379 Genevestigator:Q64548 Uniprot:Q64548
Length = 777
Score = 158 (60.7 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 41/164 (25%), Positives = 86/164 (52%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNAS 122
K D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ +
Sbjct: 589 KAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 646
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
+ K+ P +TL ++ + ++ L+ +N L LR + +DL L
Sbjct: 647 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKF 706
Query: 176 IAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+WLL+ VG N +TL + V + T+PV+Y K++ ++D +
Sbjct: 707 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQY 750
>MGI|MGI:1933947 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1933947
GO:GO:0005783 GO:GO:0016021 GO:GO:0030182 GO:GO:0005789
PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
HOGENOM:HOG000134444 OrthoDB:EOG437RDX ChiTaRS:RTN1 EMBL:AB074899
EMBL:BC030455 EMBL:BC053926 EMBL:BC058579 EMBL:BK001694
IPI:IPI00395193 RefSeq:NP_001007597.1 RefSeq:NP_703187.2
UniGene:Mm.221275 ProteinModelPortal:Q8K0T0 SMR:Q8K0T0
IntAct:Q8K0T0 STRING:Q8K0T0 PhosphoSite:Q8K0T0 PaxDb:Q8K0T0
PRIDE:Q8K0T0 Ensembl:ENSMUST00000078505 GeneID:104001
KEGG:mmu:104001 GeneTree:ENSGT00390000009934 InParanoid:Q8K0T0
NextBio:356325 Bgee:Q8K0T0 CleanEx:MM_RTN1 Genevestigator:Q8K0T0
GermOnline:ENSMUSG00000021087 Uniprot:Q8K0T0
Length = 780
Score = 158 (60.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 41/164 (25%), Positives = 86/164 (52%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNAS 122
K D+ WR+ K G++ G+ + +LF L ++ ++++V ++++ LS + F ++ +
Sbjct: 592 KAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 649
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
+ K+ P +TL ++ + ++ L+ +N L LR + +DL L
Sbjct: 650 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKF 709
Query: 176 IAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+WLL+ VG N +TL + V + T+PV+Y K++ ++D +
Sbjct: 710 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQY 753
>UNIPROTKB|Q1RMR8 [details] [associations]
symbol:RTN4 "RTN4 protein" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
EMBL:BC114748 IPI:IPI00730691 RefSeq:NP_001106692.1
UniGene:Bt.105155 SMR:Q1RMR8 STRING:Q1RMR8
Ensembl:ENSBTAT00000036144 GeneID:359718 KEGG:bta:359718
NextBio:20812748 Uniprot:Q1RMR8
Length = 379
Score = 154 (59.3 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 46/180 (25%), Positives = 89/180 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 194 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 251
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 252 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 311
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L +VPVIYE+++ +ID + A +K A K+
Sbjct: 312 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 371
>ZFIN|ZDB-GENE-030131-2426 [details] [associations]
symbol:rtn1a "reticulon 1a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 ZFIN:ZDB-GENE-030131-2426 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG008971 GeneTree:ENSGT00390000009934
EMBL:BX072537 EMBL:AY555044 IPI:IPI00613432 RefSeq:NP_001025138.2
UniGene:Dr.77106 SMR:Q4G5V7 Ensembl:ENSDART00000076574
GeneID:323706 KEGG:dre:323706 CTD:323706 InParanoid:Q4G5V7
OMA:ISHGEER NextBio:20808397 Uniprot:Q4G5V7
Length = 818
Score = 158 (60.7 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 48/205 (23%), Positives = 98/205 (47%)
Query: 60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHIS--ILSLAVLF- 116
H K D+ WR+ K S V G + + +LF L ++ +++++ +++ +LS + F
Sbjct: 625 HGFSRQKVVDLVHWRDLKQSGLVFG--SVLLLLFSLTQFSVVSVIAYLALAVLSATISFR 682
Query: 117 LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDL 169
++ + + K+ P ++L + ++ + IN + LR + +DL
Sbjct: 683 VYKSVLQAVQKTDEGHPFKSYLEVEISLSADQISKYVDKTQLYINTTMKELRRLFLVQDL 742
Query: 170 KKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKK 229
+ +WLL+ VG N +TL + + + +VPV+YEKY+ +ID + ++
Sbjct: 743 VDSIKFAVLMWLLTYVGALFNGLTLLILAVISMFSVPVVYEKYQTQIDQYLGLVRTQVNS 802
Query: 230 QYAVFDEKVLKKVLSRIPKGALKKK 254
V+ K+ ++P GA KK+
Sbjct: 803 --------VMGKIREKVP-GAKKKE 818
>UNIPROTKB|F1NNJ7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0021801 "cerebral cortex radial
glia guided migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 GO:GO:0005635
GO:GO:0030308 GO:GO:0043025 GO:GO:0030334 GO:GO:0042995
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
GO:GO:2000172 EMBL:AADN02044318 IPI:IPI00680876
Ensembl:ENSGALT00000031997 ArrayExpress:F1NNJ7 Uniprot:F1NNJ7
Length = 659
Score = 156 (60.0 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 50/198 (25%), Positives = 93/198 (46%)
Query: 54 REKP---IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI- 109
+EKP L D+ WR+ K GV+ GA+ +++L L + ++++ +I++
Sbjct: 456 KEKPTAVFSAKLNVSSVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALA 513
Query: 110 -LSLAVLF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVL 160
LS+ + F ++ I KS P V + E+ + +++S + IN + L
Sbjct: 514 LLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKEL 573
Query: 161 REIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFG 220
R + DL L +W+ + VG N +TL + + L +VPVIYE+++ +ID +
Sbjct: 574 RRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYL 633
Query: 221 EKATIEIKKQYAVFDEKV 238
+K A K+
Sbjct: 634 GLVNKNVKDAMAKIQAKI 651
Score = 36 (17.7 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 1 MAEHAPEHESSDKSLVEKIT 20
+ EH + S K L EK++
Sbjct: 184 ITEHLSQDVSEHKELAEKLS 203
>MGI|MGI:1915835 [details] [associations]
symbol:Rtn4 "reticulon 4" species:10090 "Mus musculus"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0007399 "nervous system development"
evidence=IDA] [GO:0007413 "axonal fasciculation" evidence=ISO;IMP]
[GO:0010977 "negative regulation of neuron projection development"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0021801 "cerebral cortex
radial glia guided migration" evidence=IMP] [GO:0030176 "integral
to endoplasmic reticulum membrane" evidence=ISO;ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISO] [GO:0030334
"regulation of cell migration" evidence=ISO] [GO:0030517 "negative
regulation of axon extension" evidence=ISO;ISS;IMP] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0033603 "positive
regulation of dopamine secretion" evidence=ISO] [GO:0042995 "cell
projection" evidence=IDA] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO;IDA]
[GO:0043209 "myelin sheath" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISO] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=ISO] [GO:0048679 "regulation
of axon regeneration" evidence=ISO] [GO:0050771 "negative
regulation of axonogenesis" evidence=ISO] [GO:0051930 "regulation
of sensory perception of pain" evidence=ISO] [GO:0051960
"regulation of nervous system development" evidence=IMP]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IMP] [GO:0070571 "negative regulation of neuron projection
regeneration" evidence=ISO] [GO:0071786 "endoplasmic reticulum
tubular network organization" evidence=ISO] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=ISO;IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1915835
GO:GO:0005886 GO:GO:0005635 GO:GO:0043234 GO:GO:0014823
GO:GO:0007568 GO:GO:0051930 GO:GO:0043025 GO:GO:0033603
GO:GO:0045665 GO:GO:0043005 GO:GO:0001525 GO:GO:0030334
GO:GO:0030176 GO:GO:0042995 GO:GO:0060317 GO:GO:0007413
GO:GO:0048709 GO:GO:0043209 GO:GO:0030517 GO:GO:0021553
EMBL:AL929371 UniGene:Mm.445271 GO:GO:0045687 GO:GO:0021801
PANTHER:PTHR10994 GO:GO:0071786 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 CTD:57142 HOVERGEN:HBG023134
ChiTaRS:RTN4 GO:GO:0070571 GO:GO:0048679 GO:GO:2000172
EMBL:AY102280 EMBL:AY102284 EMBL:AY102286 EMBL:AF326337
EMBL:AY114152 EMBL:AK220511 EMBL:BC032192 EMBL:BC056373
EMBL:AB073672 EMBL:AK003859 IPI:IPI00120415 IPI:IPI00270767
IPI:IPI00469392 RefSeq:NP_077188.1 RefSeq:NP_918940.1
RefSeq:NP_918943.1 UniGene:Mm.192580 UniGene:Mm.440639
UniGene:Mm.488364 PDB:2KO2 PDBsum:2KO2 ProteinModelPortal:Q99P72
SMR:Q99P72 IntAct:Q99P72 MINT:MINT-188330 STRING:Q99P72
PhosphoSite:Q99P72 PaxDb:Q99P72 PRIDE:Q99P72
Ensembl:ENSMUST00000060992 Ensembl:ENSMUST00000102841
Ensembl:ENSMUST00000102843 GeneID:68585 KEGG:mmu:68585
UCSC:uc007ihk.2 UCSC:uc007ihn.2 InParanoid:Q99P72 OMA:HTSENKT
OrthoDB:EOG4XH010 EvolutionaryTrace:Q99P72 NextBio:327502
Bgee:Q99P72 CleanEx:MM_RTN4 Genevestigator:Q99P72
GermOnline:ENSMUSG00000020458 Uniprot:Q99P72
Length = 1162
Score = 155 (59.6 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 45/180 (25%), Positives = 89/180 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 977 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1034
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1035 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1094
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L ++PVIYE+++ +ID + A +K A K+
Sbjct: 1095 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYLGLANKSVKDAMAKIQAKI 1154
>UNIPROTKB|F8WAM4 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01025160
ProteinModelPortal:F8WAM4 SMR:F8WAM4 PRIDE:F8WAM4
Ensembl:ENST00000354474 ArrayExpress:F8WAM4 Bgee:F8WAM4
Uniprot:F8WAM4
Length = 960
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 46/180 (25%), Positives = 89/180 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 775 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 832
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 833 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 892
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L +VPVIYE+++ +ID + A +K A K+
Sbjct: 893 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 952
>UNIPROTKB|D4AEM9 [details] [associations]
symbol:Rtn4 "Reticulon-4" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:620989
GO:GO:0005783 PANTHER:PTHR10994 IPI:IPI00568363
Ensembl:ENSRNOT00000051817 ArrayExpress:D4AEM9 Uniprot:D4AEM9
Length = 1045
Score = 154 (59.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 45/180 (25%), Positives = 89/180 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 860 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 917
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 918 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 977
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L ++PVIYE+++ +ID + A +K A K+
Sbjct: 978 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAKIQAKI 1037
>UNIPROTKB|F1NCP4 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0021801 "cerebral cortex radial
glia guided migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 GO:GO:0005635
GO:GO:0030308 GO:GO:0043025 GO:GO:0030334 GO:GO:0042995
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
GO:GO:2000172 EMBL:AADN02044318 IPI:IPI00581683
Ensembl:ENSGALT00000013194 ArrayExpress:F1NCP4 Uniprot:F1NCP4
Length = 1190
Score = 156 (60.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 50/198 (25%), Positives = 93/198 (46%)
Query: 54 REKP---IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI- 109
+EKP L D+ WR+ K GV+ GA+ +++L L + ++++ +I++
Sbjct: 987 KEKPTAVFSAKLNVSSVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALA 1044
Query: 110 -LSLAVLF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVL 160
LS+ + F ++ I KS P V + E+ + +++S + IN + L
Sbjct: 1045 LLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKEL 1104
Query: 161 REIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFG 220
R + DL L +W+ + VG N +TL + + L +VPVIYE+++ +ID +
Sbjct: 1105 RRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYL 1164
Query: 221 EKATIEIKKQYAVFDEKV 238
+K A K+
Sbjct: 1165 GLVNKNVKDAMAKIQAKI 1182
Score = 36 (17.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 1 MAEHAPEHESSDKSLVEKIT 20
+ EH + S K L EK++
Sbjct: 715 ITEHLSQDVSEHKELAEKLS 734
>RGD|620989 [details] [associations]
symbol:Rtn4 "reticulon 4" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007413 "axonal fasciculation" evidence=ISO;IDA]
[GO:0007568 "aging" evidence=IEP] [GO:0010977 "negative regulation
of neuron projection development" evidence=IDA] [GO:0014823
"response to activity" evidence=IEP] [GO:0016021 "integral to
membrane" evidence=TAS] [GO:0021553 "olfactory nerve development"
evidence=IEP] [GO:0021801 "cerebral cortex radial glia guided
migration" evidence=ISO;ISS] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=ISO;IDA] [GO:0030308 "negative
regulation of cell growth" evidence=ISO] [GO:0030334 "regulation of
cell migration" evidence=ISO] [GO:0030517 "negative regulation of
axon extension" evidence=ISO;ISS;IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0033603 "positive regulation of dopamine
secretion" evidence=IMP] [GO:0042995 "cell projection"
evidence=ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043209
"myelin sheath" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IDA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IDA] [GO:0048679 "regulation
of axon regeneration" evidence=IDA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEP] [GO:0050771 "negative regulation of
axonogenesis" evidence=IDA;IMP] [GO:0051930 "regulation of sensory
perception of pain" evidence=IDA] [GO:0051960 "regulation of
nervous system development" evidence=ISO] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=ISO] [GO:0070571
"negative regulation of neuron projection regeneration"
evidence=IMP] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=ISO;IDA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 RGD:620989 GO:GO:0005886 GO:GO:0005635
GO:GO:0043234 GO:GO:0032403 GO:GO:0014823 GO:GO:0007568
GO:GO:0051930 GO:GO:0043025 GO:GO:0033603 GO:GO:0045665
GO:GO:0043005 GO:GO:0001525 GO:GO:0030334 GO:GO:0030176
GO:GO:0060317 GO:GO:0007413 GO:GO:0048709 GO:GO:0043209
GO:GO:0030517 GO:GO:0021553 GO:GO:0045687 GO:GO:0021801
PANTHER:PTHR10994 GO:GO:0071786 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 CTD:57142 HOVERGEN:HBG023134
GO:GO:0070571 GO:GO:0048679 GO:GO:2000172 OrthoDB:EOG4XH010
EMBL:AF051335 EMBL:AJ242961 EMBL:AJ242962 EMBL:AJ242963
EMBL:AF132045 EMBL:AF132046 IPI:IPI00230986 IPI:IPI00230987
IPI:IPI00231765 IPI:IPI00778998 RefSeq:NP_114019.1 UniGene:Rn.1348
UniGene:Rn.163269 ProteinModelPortal:Q9JK11 SMR:Q9JK11
IntAct:Q9JK11 STRING:Q9JK11 PhosphoSite:Q9JK11 PRIDE:Q9JK11
Ensembl:ENSRNOT00000006957 Ensembl:ENSRNOT00000042965
Ensembl:ENSRNOT00000056823 GeneID:83765 KEGG:rno:83765
UCSC:RGD:620989 HOGENOM:HOG000148576 InParanoid:Q9JK11
NextBio:616333 ArrayExpress:Q9JK11 Genevestigator:Q9JK11
GermOnline:ENSRNOG00000004621 Uniprot:Q9JK11
Length = 1163
Score = 154 (59.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 45/180 (25%), Positives = 89/180 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 978 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1035
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1036 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1095
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L ++PVIYE+++ +ID + A +K A K+
Sbjct: 1096 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAKIQAKI 1155
>UNIPROTKB|F1LQN3 [details] [associations]
symbol:Rtn4 "Reticulon-4" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0021801 "cerebral cortex radial glia guided migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IEA]
[GO:2000172 "regulation of branching morphogenesis of a nerve"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620989 GO:GO:0005783 GO:GO:0005635 GO:GO:0030308 GO:GO:0043025
GO:GO:0001525 GO:GO:0030334 GO:GO:0042995 GO:GO:0060317
GO:GO:0007413 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 GO:GO:2000172 IPI:IPI00231765
PRIDE:F1LQN3 Ensembl:ENSRNOT00000006443 ArrayExpress:F1LQN3
Uniprot:F1LQN3
Length = 1163
Score = 154 (59.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 45/180 (25%), Positives = 89/180 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 978 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1035
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1036 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1095
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L ++PVIYE+++ +ID + A +K A K+
Sbjct: 1096 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAKIQAKI 1155
>UNIPROTKB|Q9NQC3 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0060317 "cardiac epithelial to mesenchymal
transition" evidence=IEA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=IDA] [GO:0030517 "negative regulation of axon extension"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0042981
"regulation of apoptotic process" evidence=NAS] [GO:0006915
"apoptotic process" evidence=NAS] [GO:0021801 "cerebral cortex
radial glia guided migration" evidence=ISS] [GO:0007413 "axonal
fasciculation" evidence=ISS] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=ISS] [GO:0071786 "endoplasmic
reticulum tubular network organization" evidence=IMP] [GO:0030334
"regulation of cell migration" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005886 GO:GO:0005635 Reactome:REACT_111102
GO:GO:0006915 GO:GO:0048011 Pathway_Interaction_DB:p75ntrpathway
EMBL:CH471053 GO:GO:0043234 GO:GO:0042981 GO:GO:0014823
GO:GO:0007568 GO:GO:0051930 GO:GO:0043025 GO:GO:0033603
GO:GO:0045665 GO:GO:0043005 GO:GO:0001525 GO:GO:0030334
GO:GO:0030176 GO:GO:0060317 GO:GO:0007413 GO:GO:0048709
GO:GO:0043209 GO:GO:0030517 GO:GO:0021553 EMBL:AC013414
GO:GO:0045687 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG306139 EMBL:AF087901 EMBL:AF148537 EMBL:AF148538
EMBL:AJ251383 EMBL:AJ251384 EMBL:AJ251385 EMBL:AB040462
EMBL:AB040463 EMBL:AF333336 EMBL:AY102285 EMBL:AY102276
EMBL:AY102277 EMBL:AY102278 EMBL:AY102279 EMBL:AY123245
EMBL:AY123246 EMBL:AY123247 EMBL:AY123248 EMBL:AY123249
EMBL:AY123250 EMBL:AB015639 EMBL:AF077050 EMBL:AF132047
EMBL:AF132048 EMBL:AF320999 EMBL:AB020693 EMBL:AF125103
EMBL:AF177332 EMBL:AC092461 EMBL:AC093165 EMBL:BC001035
EMBL:BC007109 EMBL:BC010737 EMBL:BC012619 EMBL:BC014366
EMBL:BC016165 EMBL:BC026788 EMBL:BC068991 EMBL:BC150182
EMBL:BC152425 EMBL:BC152555 EMBL:AF063601 IPI:IPI00021766
IPI:IPI00219207 IPI:IPI00298289 IPI:IPI00477663 IPI:IPI00478442
IPI:IPI00894213 RefSeq:NP_008939.1 RefSeq:NP_065393.1
RefSeq:NP_722550.1 RefSeq:NP_997403.1 RefSeq:NP_997404.1
UniGene:Hs.741208 PDB:2G31 PDB:2JV5 PDBsum:2G31 PDBsum:2JV5
ProteinModelPortal:Q9NQC3 SMR:Q9NQC3 IntAct:Q9NQC3 MINT:MINT-154434
STRING:Q9NQC3 PhosphoSite:Q9NQC3 DMDM:17369290 PaxDb:Q9NQC3
PRIDE:Q9NQC3 DNASU:57142 Ensembl:ENST00000317610
Ensembl:ENST00000337526 Ensembl:ENST00000357376
Ensembl:ENST00000357732 Ensembl:ENST00000394609
Ensembl:ENST00000394611 Ensembl:ENST00000404909
Ensembl:ENST00000405240 GeneID:57142 KEGG:hsa:57142 UCSC:uc002ryd.3
UCSC:uc002ryf.3 CTD:57142 GeneCards:GC02M055199 H-InvDB:HIX0002059
HGNC:HGNC:14085 HPA:CAB005388 MIM:604475 neXtProt:NX_Q9NQC3
PharmGKB:PA34883 HOVERGEN:HBG023134 InParanoid:Q9NQC3 ChiTaRS:RTN4
EvolutionaryTrace:Q9NQC3 GenomeRNAi:57142 NextBio:63075
PMAP-CutDB:Q9NQC3 ArrayExpress:Q9NQC3 Bgee:Q9NQC3
Genevestigator:Q9NQC3 GermOnline:ENSG00000115310 GO:GO:0070571
GO:GO:0048679 GO:GO:2000172 Uniprot:Q9NQC3
Length = 1192
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 46/180 (25%), Positives = 89/180 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 1007 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1064
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1065 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1124
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L +VPVIYE+++ +ID + A +K A K+
Sbjct: 1125 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 1184
>UNIPROTKB|F1N405 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000172 "regulation of branching morphogenesis of a
nerve" evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IEA] [GO:0060317 "cardiac epithelial
to mesenchymal transition" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0021801 "cerebral cortex radial glia guided migration"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0005635 GO:GO:0030308 GO:GO:0043025
GO:GO:0001525 GO:GO:0030334 GO:GO:0042995 GO:GO:0060317
GO:GO:0007413 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 GO:GO:2000172 OMA:HTSENKT
EMBL:DAAA02030906 EMBL:DAAA02030907 IPI:IPI00705603
Ensembl:ENSBTAT00000014745 ArrayExpress:F1N405 Uniprot:F1N405
Length = 1202
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 46/180 (25%), Positives = 89/180 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 1017 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1074
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1075 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1134
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L +VPVIYE+++ +ID + A +K A K+
Sbjct: 1135 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 1194
>UNIPROTKB|A7MC64 [details] [associations]
symbol:rtn1 "Reticulon-1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994
HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BC118846
EMBL:BC152060 EMBL:AL635298 EMBL:BK004008 RefSeq:NP_001078819.2
UniGene:Str.40113 ProteinModelPortal:A7MC64 SMR:A7MC64
STRING:A7MC64 Ensembl:ENSXETT00000037003 GeneID:677736
KEGG:xtr:677736 Xenbase:XB-GENE-1011333 Bgee:A7MC64 Uniprot:A7MC64
Length = 764
Score = 151 (58.2 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 41/174 (23%), Positives = 90/174 (51%)
Query: 56 KPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLA 113
KP+ L K ++ WR+ K G++ G+ + +LF L ++ +++++ ++++ LS
Sbjct: 568 KPLPF-LSKRKAIELLYWRDIK-QTGIVFGSVLL-MLFSLTQFSVVSVIAYLALAALSAT 624
Query: 114 VLF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIAS 165
+ F ++ + + K+ P ++L ++ + ++ L+ N + LR +
Sbjct: 625 ISFRIYKSVLQAVQKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQAYTNSIVKELRRLFL 684
Query: 166 GRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+DL L +WLL+ VG N +TL + V + ++PV+Y+KY+ +ID +
Sbjct: 685 VQDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQY 738
>UNIPROTKB|E2R925 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03007528
EMBL:AAEX03007529 Ensembl:ENSCAFT00000004428 Uniprot:E2R925
Length = 1186
Score = 154 (59.3 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 46/180 (25%), Positives = 89/180 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I ++LS+ + F ++ I
Sbjct: 1001 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIVLALLSVTISFRIYKGVIQAI 1058
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1059 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1118
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L +VPVIYE+++ +ID + A +K A K+
Sbjct: 1119 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKSVKDAMAKIQAKI 1178
Score = 37 (18.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 4 HAPEHESSDKSLVEKI 19
H P+ S D+S + K+
Sbjct: 927 HVPDELSKDRSDISKV 942
>UNIPROTKB|J9P0R7 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:HTSENKT
EMBL:AAEX03007528 EMBL:AAEX03007529 Ensembl:ENSCAFT00000045541
Uniprot:J9P0R7
Length = 1198
Score = 154 (59.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 46/180 (25%), Positives = 89/180 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I ++LS+ + F ++ I
Sbjct: 1013 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIVLALLSVTISFRIYKGVIQAI 1070
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1071 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1130
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L +VPVIYE+++ +ID + A +K A K+
Sbjct: 1131 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKSVKDAMAKIQAKI 1190
Score = 37 (18.1 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 4 HAPEHESSDKSLVEKI 19
H P+ S D+S + K+
Sbjct: 939 HVPDELSKDRSDISKV 954
>ZFIN|ZDB-GENE-030710-1 [details] [associations]
symbol:rtn4a "reticulon 4a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0002040 "sprouting angiogenesis"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IGI;IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-1 GO:GO:0005783 GO:GO:0007411 GO:GO:0002040
GO:GO:0048936 PANTHER:PTHR10994 HOVERGEN:HBG000838
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BX324134
EMBL:AY555039 IPI:IPI00650155 RefSeq:NP_001073381.1
UniGene:Dr.121711 UniGene:Dr.47577 SMR:Q4G5W2 STRING:Q4G5W2
Ensembl:ENSDART00000081966 GeneID:447816 KEGG:dre:447816 CTD:447816
InParanoid:Q4G5W2 NextBio:20832340 Uniprot:Q4G5W2
Length = 322
Score = 141 (54.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 51/197 (25%), Positives = 97/197 (49%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
++ WR+ + GV+ GA +++L L +I+++ ++++ LS+ V F ++ +
Sbjct: 137 ELLYWRDLQ-RTGVVFGA-GLFLLLSLSMCSIISVLSYVALALLSVTVSFRIYKGILQAV 194
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P LP + V +++ + IN + LR + DL L
Sbjct: 195 QKSEDGHPFKMYLDKDTALPAEMVHKYSDSTLVHINTVIKELRRLFLVEDLVDSLKFAVL 254
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+L+ VG N +TL + F+ + PVIYEK++ +ID + + KQ+ + V
Sbjct: 255 MWILTYVGALFNGLTLIILGFIGAFSCPVIYEKHQAQIDHYYGL----VNKQF----KDV 306
Query: 239 LKKVLSRIPKGALKKKD 255
+ K+ ++IP GA K +
Sbjct: 307 VGKIQAKIP-GAKPKTE 322
>UNIPROTKB|Q5MY90 [details] [associations]
symbol:rtn1-b "Reticulon-1-B" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY484582
EMBL:AF498369 EMBL:BC084108 EMBL:CD326067 EMBL:BK004058
RefSeq:NP_001089011.1 UniGene:Xl.8555 ProteinModelPortal:Q5MY90
SMR:Q5MY90 GeneID:496397 KEGG:xla:496397 CTD:496397
Xenbase:XB-GENE-1011340 HOVERGEN:HBG008971 Uniprot:Q5MY90
Length = 752
Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/187 (22%), Positives = 91/187 (48%)
Query: 43 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLIT 102
A++SKV + P K D+ WR+ K G++ G+ + +LF L + +++
Sbjct: 542 AYQSKVIGMTSILGPKPLTFFKKKAIDLLYWRDVK-QTGIVFGSILL-MLFSLTLFSVVS 599
Query: 103 LVCHISI--LSLAVLF-LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYE 152
++ ++++ LS + F ++ + + K+ P ++L ++ + ++ +
Sbjct: 600 VIAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKSYLDIEISLSQEQIQKYTGCFQLY 659
Query: 153 INRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKY 212
N LR + +DL L +WLL+ VG N +TL + V + ++PV+Y+KY
Sbjct: 660 TNSIAKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKY 719
Query: 213 EDKIDSF 219
+ +ID +
Sbjct: 720 QAQIDQY 726
>FB|FBgn0053113 [details] [associations]
symbol:Rtnl1 "Reticulon-like1" species:7227 "Drosophila
melanogaster" [GO:0042048 "olfactory behavior" evidence=IMP]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0044432 "endoplasmic reticulum part"
evidence=IDA] [GO:0005790 "smooth endoplasmic reticulum"
evidence=IDA] [GO:0045169 "fusome" evidence=IDA] [GO:0002121
"inter-male aggressive behavior" evidence=IMP] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 EMBL:AE014134 GO:GO:0005811
GO:GO:0002121 GO:GO:0042048 GO:GO:0045169 GO:GO:0005790
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
RefSeq:NP_001162875.1 UniGene:Dm.1559 ProteinModelPortal:E1JHT6
SMR:E1JHT6 EnsemblMetazoa:FBtr0301538 GeneID:33721
KEGG:dme:Dmel_CG33113 CTD:33721 FlyBase:FBgn0053113 OMA:YFANEQK
PhylomeDB:E1JHT6 GenomeRNAi:33721 NextBio:784952 Bgee:E1JHT6
GO:GO:0044432 Uniprot:E1JHT6
Length = 607
Score = 134 (52.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 47/162 (29%), Positives = 81/162 (50%)
Query: 70 IFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSL--AVLF-LWSNASTFIN 126
+ WR+ K S G++ GA + L + + +I++ ++S+L+L V F ++ + + +
Sbjct: 414 LIYWRDVKKS-GIVFGA-GLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAVQ 471
Query: 127 KSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLK---KFLGVI 176
K+ P +TL + V A IN ++ LR + D+ KF GVI
Sbjct: 472 KTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDSIKF-GVI 530
Query: 177 AGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDS 218
LW+ + VG W N +TL + FV L T+P +YE + ID+
Sbjct: 531 --LWVFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDT 570
>WB|WBGene00004336 [details] [associations]
symbol:ret-1 species:6239 "Caenorhabditis elegans"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GeneTree:ENSGT00550000074593 PANTHER:PTHR10994 EMBL:Z78066
GeneID:179981 KEGG:cel:CELE_W06A7.3 CTD:179981 NextBio:907638
EMBL:Z78067 RefSeq:NP_001123026.1 ProteinModelPortal:G5EDI2
SMR:G5EDI2 IntAct:G5EDI2 EnsemblMetazoa:W06A7.3f WormBase:W06A7.3f
OMA:EITQNDD Uniprot:G5EDI2
Length = 3303
Score = 137 (53.3 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 57/204 (27%), Positives = 95/204 (46%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSL-------AVLFLWSNA 121
D+ WR+ K SA VL + A+ VLF L +Y L+T+V + +L+L ++ ++
Sbjct: 3106 DVIYWRDAKKSAIVL--SLALLVLFVLAKYPLLTVVTYSLLLALGAAAGFRSIFSVFKKV 3163
Query: 122 STFINKSPPEIPV-------VTLPEKFVLEFASALRYE---INRALAVLREIASGRDLKK 171
I K+ E P +TLP++ V A I L L + S + K
Sbjct: 3164 EAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVESPLESIK 3223
Query: 172 FLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQY 231
F G++ LW L+ + +W + TL + + + +VP +YE ++ ID + +K
Sbjct: 3224 F-GLV--LWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHLATISGHLKNVQ 3280
Query: 232 AVFDEKVLKKVLSRIPKGALKKKD 255
+ DEK+ L P A +KKD
Sbjct: 3281 NIIDEKL--PFLRSAPVAAEEKKD 3302
>UNIPROTKB|G3X7U3 [details] [associations]
symbol:LOC100847649 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:DAAA02063501
Ensembl:ENSBTAT00000046142 Uniprot:G3X7U3
Length = 74
Score = 103 (41.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 22/76 (28%), Positives = 46/76 (60%)
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ ++P++YEKY+ +ID + + I + + +
Sbjct: 6 MWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHY-----VGIARDQT---KSI 57
Query: 239 LKKVLSRIPKGALKKK 254
++K+ +++P G KKK
Sbjct: 58 VEKIQAKLP-GIAKKK 72
>TAIR|locus:2058223 [details] [associations]
symbol:AT2G43420 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISS] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA;ISS]
[GO:0016616 "oxidoreductase activity, acting on the CH-OH group of
donors, NAD or NADP as acceptor" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005886 GO:GO:0009506 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0016126 EMBL:AC002335 GO:GO:0047012 UniGene:At.12188
EMBL:DQ415280 EMBL:AK117930 EMBL:AY045841 IPI:IPI00543388
PIR:H84865 RefSeq:NP_565998.1 UniGene:At.59216
ProteinModelPortal:A9X4U2 SMR:A9X4U2 PaxDb:A9X4U2 PRIDE:A9X4U2
EnsemblPlants:AT2G43420.1 GeneID:818943 KEGG:ath:AT2G43420
TAIR:At2g43420 InParanoid:Q94AR9 OMA:HAHICAA PhylomeDB:A9X4U2
ProtClustDB:CLSN2688905 Genevestigator:A9X4U2 Uniprot:A9X4U2
Length = 561
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 45/159 (28%), Positives = 70/159 (44%)
Query: 61 VLGAGKPADIFLWRNKK---ISAGVLGGATAMWVLFE--LLEYHLITLVCHISILSLAVL 115
+LG GK ADI LWRN+K +S VL W F L+ ++ V
Sbjct: 373 LLGCGKVADILLWRNEKKTFVSFLVLN-LFYYWFFFSGNTFTSSAAQLLFIFAVALYGVS 431
Query: 116 FLWSNASTF-INKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLG 174
F+ S F +NK PP + E V + +S + N+ + + ++SG D KF
Sbjct: 432 FVPSKIFGFQVNKIPPWR--FEISESAVRDLSSDIVVVWNQGVRSFKSLSSGGDWIKFFK 489
Query: 175 VIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYE 213
+ L+LL ++ + + + V T IYE+YE
Sbjct: 490 IAGSLYLLKLIVSR-SLAAFLFTVMSFSFTGFFIYEQYE 527
>CGD|CAL0001315 [details] [associations]
symbol:orf19.3799 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] [GO:0032541 "cortical endoplasmic
reticulum" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0071788 "endoplasmic reticulum tubular network maintenance"
evidence=IEA] [GO:0051292 "nuclear pore complex assembly"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
CGD:CAL0001315 GO:GO:0005783 EMBL:AACQ01000057 EMBL:AACQ01000056
PANTHER:PTHR10994 eggNOG:NOG116114 RefSeq:XP_717204.1
RefSeq:XP_717280.1 STRING:Q5A691 GeneID:3641084 GeneID:3641113
KEGG:cal:CaO19.11280 KEGG:cal:CaO19.3799 Uniprot:Q5A691
Length = 366
Score = 113 (44.8 bits), Expect = 0.00039, P = 0.00039
Identities = 47/187 (25%), Positives = 79/187 (42%)
Query: 59 HHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLW 118
HH + D W+N I G + G+ ++ L L +L + H++ + L +
Sbjct: 50 HH--SSCSTTDFLTWKNP-IKTGKVFGSL-VFGLIVLKTVNLFNIFFHLAYIGLLISAAA 105
Query: 119 SNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLRE----IASGRDLKKFLG 174
+ I + + F + E+ L E I D++ L
Sbjct: 106 EYSGKLITGKGFLANFKPTGKLYAKRFNDEVLPELANFNVHLEESFNKIVYSHDIETTLK 165
Query: 175 VIAGL-WLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAV 233
AG+ ++L + +W + TL +I VL+ TVPVIY+ Y+ +ID+ T IK + A
Sbjct: 166 A-AGISYILYKLTSWFSLYTLIFIFVVLIFTVPVIYKTYKKEIDAAVADITKTIKTKSAE 224
Query: 234 FDEKVLK 240
F EK K
Sbjct: 225 FTEKAHK 231
>UNIPROTKB|Q5A691 [details] [associations]
symbol:RTN1 "Potential conserved endoplasmic reticulum
protein" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 CGD:CAL0001315 GO:GO:0005783 EMBL:AACQ01000057
EMBL:AACQ01000056 PANTHER:PTHR10994 eggNOG:NOG116114
RefSeq:XP_717204.1 RefSeq:XP_717280.1 STRING:Q5A691 GeneID:3641084
GeneID:3641113 KEGG:cal:CaO19.11280 KEGG:cal:CaO19.3799
Uniprot:Q5A691
Length = 366
Score = 113 (44.8 bits), Expect = 0.00039, P = 0.00039
Identities = 47/187 (25%), Positives = 79/187 (42%)
Query: 59 HHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLW 118
HH + D W+N I G + G+ ++ L L +L + H++ + L +
Sbjct: 50 HH--SSCSTTDFLTWKNP-IKTGKVFGSL-VFGLIVLKTVNLFNIFFHLAYIGLLISAAA 105
Query: 119 SNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLRE----IASGRDLKKFLG 174
+ I + + F + E+ L E I D++ L
Sbjct: 106 EYSGKLITGKGFLANFKPTGKLYAKRFNDEVLPELANFNVHLEESFNKIVYSHDIETTLK 165
Query: 175 VIAGL-WLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAV 233
AG+ ++L + +W + TL +I VL+ TVPVIY+ Y+ +ID+ T IK + A
Sbjct: 166 A-AGISYILYKLTSWFSLYTLIFIFVVLIFTVPVIYKTYKKEIDAAVADITKTIKTKSAE 224
Query: 234 FDEKVLK 240
F EK K
Sbjct: 225 FTEKAHK 231
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.140 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 255 233 0.00086 113 3 11 22 0.36 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 67
No. of states in DFA: 604 (64 KB)
Total size of DFA: 179 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.56u 0.11s 18.67t Elapsed: 00:00:00
Total cpu time: 18.57u 0.11s 18.68t Elapsed: 00:00:01
Start: Mon May 20 21:23:37 2013 End: Mon May 20 21:23:38 2013