BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025266
(255 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SH59|RTNLC_ARATH Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1
SV=1
Length = 255
Score = 318 bits (815), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/255 (66%), Positives = 202/255 (79%), Gaps = 5/255 (1%)
Query: 5 APEHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDA-FKSKVFRLFGREKPIHHVLG 63
A EH+ ++S++EKI++KIHGHD SSS S D A K+K++RLFGRE+P+H + G
Sbjct: 2 AEEHKH-EESIMEKISEKIHGHDDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFG 60
Query: 64 AGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNAST 123
GKPADIFLWRNKK+S GVLG AT W+LFELLEY+L+TL HISIL+LAVLFLWS+AST
Sbjct: 61 GGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSAST 120
Query: 124 FINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLS 183
FI+KSP IP V +PE VL+ AS LR EINR VLR+IASGRDLKKFL VIAGLW+LS
Sbjct: 121 FIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLS 180
Query: 184 IVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVL 243
VG+ CNF+TL YI VLL T+PV+YEKYEDK+D FGEKA EIKKQY FD KVL KV+
Sbjct: 181 KVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVM 240
Query: 244 SRIPKGA---LKKKD 255
S+IPKGA +KKKD
Sbjct: 241 SKIPKGAFAFIKKKD 255
>sp|O82352|RTNLE_ARATH Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1
SV=1
Length = 255
Score = 311 bits (798), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/255 (60%), Positives = 201/255 (78%), Gaps = 5/255 (1%)
Query: 1 MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDD-DKPSSIDAFKSKVFRLFGREKPIH 59
MAE + +++SL+EKI++KIH HDSSSS + +KP S A K+K++R+FGREKP+H
Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVH 60
Query: 60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
VLG GKPAD+FLWR+KK+S VLG ATA+WVLFEL+EYHL++L+CHISIL+L LFLWS
Sbjct: 61 KVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWS 120
Query: 120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
NA T INK+ P+IP + +PE+ L AS+LR E+N+A +LR IA GRDLKKFL V+ GL
Sbjct: 121 NAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGL 180
Query: 180 WLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVL 239
W++S+VGNW NF+TL YI FV+LHTVP++YEK+EDK+D EKA E++KQY VFDE
Sbjct: 181 WIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDE--- 237
Query: 240 KKVLSRIPKGALKKK 254
KVLS+IP +LK K
Sbjct: 238 -KVLSKIPIASLKAK 251
>sp|Q9FFS0|RTNLD_ARATH Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1
SV=1
Length = 257
Score = 308 bits (789), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/253 (62%), Positives = 193/253 (76%), Gaps = 5/253 (1%)
Query: 7 EHESSDKSLVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSK-----VFRLFGREKPIHHV 61
E ++S++EKI +KIHGH SSS SD D + S ++RLFGREKP+H V
Sbjct: 3 EDHKHEESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKV 62
Query: 62 LGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNA 121
LG GKPADIFLWRNKK+S GVLG TA WVLFEL EYHL+ +CH +I +LA LFLWSNA
Sbjct: 63 LGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNA 122
Query: 122 STFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWL 181
TFI+KS P IP V +PE +L+ S LR EINR L +LR IASG+D+KKF+ VIAGLW+
Sbjct: 123 CTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWV 182
Query: 182 LSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKK 241
LSI+G+ NF+TLFY VLL T+PV+YEKYEDK+D++GEKA EIKKQYAV DEKVL+K
Sbjct: 183 LSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRK 242
Query: 242 VLSRIPKGALKKK 254
V+S+IP+GAL KK
Sbjct: 243 VISKIPRGALNKK 255
>sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1
SV=1
Length = 275
Score = 296 bits (759), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 143/207 (69%), Positives = 170/207 (82%), Gaps = 4/207 (1%)
Query: 48 VFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI 107
V+RLFGRE+P+H VLG GKPADIF+W+NKK+S GVLGGATA WV+FEL+EYHL+TL+CH+
Sbjct: 70 VYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHV 129
Query: 108 SILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGR 167
I+ LAVLFLWSNA+ FINKSPP+IP V +PE+ +L+ AS LR EINR + LREIASGR
Sbjct: 130 MIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGR 189
Query: 168 DLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEI 227
DLKKFL IAGLW+LSI+G NF+TL YI VLL TVP+ Y+KYEDK+D GEKA IE+
Sbjct: 190 DLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIEL 249
Query: 228 KKQYAVFDEKVLKKVLSRIPKGALKKK 254
KKQYAV DE KVLS+IP G LK K
Sbjct: 250 KKQYAVLDE----KVLSKIPLGPLKNK 272
>sp|Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1
SV=1
Length = 271
Score = 290 bits (742), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 150/249 (60%), Positives = 191/249 (76%), Gaps = 11/249 (4%)
Query: 13 KSLVEKITDKIHGHDSSS-------SDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAG 65
+SL+EK+++KIH SS + SS + KSKV+RLFGRE+P+H VLG G
Sbjct: 24 ESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGG 83
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFI 125
KPADIF+W++KK+S GV GGAT WVLFEL+EYHL+TL+CH+ I++LAVLFLWSNA+ FI
Sbjct: 84 KPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFI 143
Query: 126 NKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIV 185
+KSPP+IP V +PE+ +L+ AS LR EINR ++ LREIASGRD+KKFL IAGLW+LSI+
Sbjct: 144 HKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSIL 203
Query: 186 GNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSR 245
G +F+TL YI VLL TVP+ Y+KYEDK+DS+GEKA E+KKQYAV D KV S+
Sbjct: 204 GGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLD----AKVFSK 259
Query: 246 IPKGALKKK 254
IP+G LK K
Sbjct: 260 IPRGPLKDK 268
>sp|Q6DBN4|RTNLF_ARATH Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1
SV=1
Length = 253
Score = 288 bits (738), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 192/255 (75%), Gaps = 5/255 (1%)
Query: 1 MAEHAPEHESSDKSLVEKITDKIHGHDSSSSDSDDD-KPSSIDAFKSKVFRLFGREKPIH 59
MAE + ++SL+EKI DKIH HDSSSS + KP S A K+K++RLFGREKP+H
Sbjct: 1 MAEELEKSMHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVH 60
Query: 60 HVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS 119
VLG G PAD+FLWR+KK+SA VLG ATA+WVLFEL+EYH ++LVCHI I +LA LFL S
Sbjct: 61 KVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLS 120
Query: 120 NASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGL 179
NA F+NK+PP+IP + + E+ L SALR E+N+A +LR IA GRDLKKFL V+ GL
Sbjct: 121 NAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGL 180
Query: 180 WLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVL 239
W++S+VGNW NF+TL YI FV+LHTVP++YEK+EDK+D EK E+KK Y VFDE
Sbjct: 181 WIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDE--- 237
Query: 240 KKVLSRIPKGALKKK 254
KVLS++P +LK K
Sbjct: 238 -KVLSKLPVASLKAK 251
>sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1
SV=1
Length = 247
Score = 218 bits (554), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/243 (44%), Positives = 156/243 (64%), Gaps = 11/243 (4%)
Query: 15 LVEKITDKIHGHDSSSSDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWR 74
LV+ T+ + + SS + + D+ S+ RLF R+KPIHHVLG GK AD+ LWR
Sbjct: 14 LVDNFTETVQKNKHGSSFFEQE-----DSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWR 68
Query: 75 NKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPV 134
NKKISA VL GATA+WVLFE + +H ++LVC+ +L + F+WSNAS F+N+S +P
Sbjct: 69 NKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPR 128
Query: 135 VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTL 194
+ LP+ F E A+ E+NR L L+++A +LK+FL + GLW+ ++VG+ CNF+T+
Sbjct: 129 LVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTV 188
Query: 195 FYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKG--ALK 252
YI FV HT+PV+YE+YED++D F + ++ Y D LSRIP G LK
Sbjct: 189 LYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLD----TGFLSRIPSGKFGLK 244
Query: 253 KKD 255
K++
Sbjct: 245 KRE 247
>sp|Q9M145|RTNLG_ARATH Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=3
SV=2
Length = 244
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 147/207 (71%), Gaps = 3/207 (1%)
Query: 36 DKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFEL 95
+KP S + ++R+FGRE+PIH VLG GKPAD+ LWR+KK++ G+L T +W+LF
Sbjct: 39 EKPDSPVPINAPIYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGF 98
Query: 96 LEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINR 155
L+T +C SIL L + FLWSNA +NKSP + + +PEK +L+ ASA+ +E+N
Sbjct: 99 GGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNC 155
Query: 156 ALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDK 215
A A LR IA RD+K F+ + GLWL+S++GNW +F++L YI FVL+HTVP++YEKYED+
Sbjct: 156 AFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDE 215
Query: 216 IDSFGEKATIEIKKQYAVFDEKVLKKV 242
ID EKA IE+KK Y VF+ K L K+
Sbjct: 216 IDPIAEKAVIEMKKHYQVFEAKFLSKI 242
>sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2
SV=1
Length = 225
Score = 177 bits (449), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 135/226 (59%), Gaps = 10/226 (4%)
Query: 29 SSSDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATA 88
SSSDS+D++ K +LF R++ IH + G GK ADI LWR KI+A ++ G +
Sbjct: 7 SSSDSEDERTIH------KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSI 60
Query: 89 MWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASA 148
+W L E++EY+ ITL+CH S+ S+ F+WS AS F+N P IP V L E + A +
Sbjct: 61 LWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARS 120
Query: 149 LRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVI 208
N+ L L ++A GRD F L+++SI+G + NFV L +I FV + T+PV+
Sbjct: 121 FHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVM 180
Query: 209 YEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGALKKK 254
YE YED +D+ K ++KK Y +KV VLS+IP+G +K K
Sbjct: 181 YEMYEDDVDTAAGKLMRKMKKLY----KKVDTNVLSKIPRGTVKNK 222
>sp|Q6NPD8|RTNLJ_ARATH Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2
SV=1
Length = 201
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 55 EKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAV 114
E+ +H + G AD+ +W+N++ +LG T +W LFE Y V + +LS+ +
Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61
Query: 115 LFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLG 174
LFLW+ ++ N+ P++P + + E+FV A A+R IN LAV REI GR+ K+
Sbjct: 62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121
Query: 175 VIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIE---IKKQY 231
V LW +S VGN+ NF+T+ Y+ VL +P +YE+Y+D ID EK ++ I+ QY
Sbjct: 122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLID---EKLSLTHRVIQTQY 178
Query: 232 AVFDEKVLKKVLSRIPKGALKK 253
DE++L+K++++ P +KK
Sbjct: 179 RKIDERLLQKIIAK-PTNKIKK 199
>sp|Q8GYH6|RTNLP_ARATH Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2
SV=1
Length = 226
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 113/214 (52%)
Query: 29 SSSDSDDDKPSSIDAFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATA 88
S SD D D + S +RL GR+ +H +G GK AD+ LWR + +S GV+ +T
Sbjct: 3 SLSDIDGDFDGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTV 62
Query: 89 MWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASA 148
W++FE +++ + ++ + + F+ + S F N+ +P + L E+ V A++
Sbjct: 63 AWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAAS 122
Query: 149 LRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVI 208
R ++N L + ++ G D + F V+ LWLLS +G++ + TL YI +L T+P +
Sbjct: 123 FRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPAL 182
Query: 209 YEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKV 242
Y KY+ K+D + Y + DE V+ ++
Sbjct: 183 YSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRL 216
>sp|A2RVT6|RTNLN_ARATH Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2
SV=2
Length = 215
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 117/202 (57%), Gaps = 16/202 (7%)
Query: 58 IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFL 117
++H LG G+ ADI W+NKK S +LG T +W LFE++EY IT +C I +L + + +
Sbjct: 22 LYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLI 81
Query: 118 WS--NASTFINKSPPEIPVVTLPEKFVLEFASALRY---EINRALAVLREIASGRDLKKF 172
WS +S I PP I + + E S R+ +IN + L +I+SG+D +
Sbjct: 82 WSYIGSSQLIQSKPPSINDLRISE-------SNWRFLFNKINWFIIKLYDISSGKDFRLL 134
Query: 173 LGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYA 232
+ LW+LS+VGN+ + +TL YIVFV L T+P++YE+YE+++ K+ ++KK
Sbjct: 135 FLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLN 194
Query: 233 VFDEKVLKKVLSRIPKGALKKK 254
F+ KV+ K IPK K +
Sbjct: 195 KFNSKVINK----IPKAQAKTR 212
>sp|Q9LT71|RTNLK_ARATH Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2
SV=1
Length = 200
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 96/159 (60%)
Query: 59 HHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLW 118
H LGAG AD+ LWRN+ + +L +T W LFE Y+L++ V ++ +L +A+ FLW
Sbjct: 14 HQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLW 73
Query: 119 SNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
+ ++T +N+ P +P + +PE+F + A LR IN L++ +I R+ + L V
Sbjct: 74 AKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLV 133
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKID 217
LW +S VG N +TL YI +L + P++YEKY+D ID
Sbjct: 134 LWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172
>sp|Q9M392|RTNLL_ARATH Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2
SV=1
Length = 203
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 101/167 (60%)
Query: 50 RLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI 109
+LF R++ IH +LG G AD+ LWR K +S G++ A W++FE Y + TL+ + +
Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLL 66
Query: 110 LSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDL 169
L L++LFLWS +++ +N+ P +P + E E + LR +N+ L V +IA RD
Sbjct: 67 LLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDS 126
Query: 170 KKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKI 216
+ + V L+LLS++G+ +F TL + +++ TVP YE+YED I
Sbjct: 127 ELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>sp|O64837|RTNLM_ARATH Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2
SV=1
Length = 206
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKS 128
DI+LWR KK++ L +T+ W+L + IT+V I I ++++FLW + ++K
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 129 PPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNW 188
PE+ + + E+FV+E + R + + + + + + F + G W+LS +GN
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 189 CNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLK 240
+F T +I V+ TVP ++E+Y D+I + K Y EK+L+
Sbjct: 138 LDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILE 189
>sp|Q9ZU43|RTNLO_ARATH Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2
SV=2
Length = 191
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 10/193 (5%)
Query: 58 IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFL 117
+ +LG G AD+ LW++K S L AT W L E +E L+ L+C I +L + +LFL
Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFL 63
Query: 118 WSN-ASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVI 176
W+ F + PP + P+ + AL + L +L EIA G+D K FL I
Sbjct: 64 WAKFGEVFFTRRPPTPEELNQPDSPL----KALFSMMEGHLLMLYEIAYGKDNKTFLKTI 119
Query: 177 AGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDE 236
+ ++ +G++ + +T+ YI V T+PV+Y ++++ IDSF K + E VF
Sbjct: 120 LYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSFMGKVSEEKNNLLEVF-- 177
Query: 237 KVLKKVLSRIPKG 249
K+V+S+IP+
Sbjct: 178 ---KQVVSKIPRA 187
>sp|O95197|RTN3_HUMAN Reticulon-3 OS=Homo sapiens GN=RTN3 PE=1 SV=2
Length = 1032
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 100/196 (51%), Gaps = 21/196 (10%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 846 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 903
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 904 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 963
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ +VP++YEKY+ +ID + A + K +
Sbjct: 964 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTK--------SI 1015
Query: 239 LKKVLSRIPKGALKKK 254
++K+ +++P G KKK
Sbjct: 1016 VEKIQAKLP-GIAKKK 1030
>sp|Q5RBL9|RTN3_PONAB Reticulon-3 OS=Pongo abelii GN=RTN3 PE=2 SV=1
Length = 236
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 50 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 107
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 108 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 167
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ +VP++YEKY+ +ID + A + K +
Sbjct: 168 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTK--------SI 219
Query: 239 LKKVLSRIPKGALKKKD 255
++K+ +++P A KK +
Sbjct: 220 VEKIQAKLPGIAKKKAE 236
>sp|Q08D83|RTN3_BOVIN Reticulon-3 OS=Bos taurus GN=RTN3 PE=2 SV=1
Length = 256
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 70 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 127
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A INRAL ++ + DL L +
Sbjct: 128 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 187
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ ++P++YEKY+ +ID + A + K +
Sbjct: 188 MWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARDQTK--------SI 239
Query: 239 LKKVLSRIPKGALKKKD 255
++K+ +++P A KK +
Sbjct: 240 VEKIQAKLPGIAKKKAE 256
>sp|Q68EW1|RTN3B_XENLA Reticulon-3-B OS=Xenopus laevis GN=rtn3-b PE=2 SV=1
Length = 214
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 23/198 (11%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K S V GG M +L L + +I+++ ++ S+LS+ + F ++ + +
Sbjct: 28 DLLYWRDVKQSGMVFGGT--MVLLLSLAAFSIISVISYLVLSLLSVTISFRVYKSVLQAV 85
Query: 126 NKSPPEIPVVTLPEK--------FVLEFASALRYEINRALAVLREIASGRDLKKFLGVIA 177
K+ P L EK F +S+L + +N AL + + DL L +
Sbjct: 86 QKTEEGHPFKPLLEKDIALSSDSFQKGLSSSLAH-VNHALKSIVRLFLVEDLVDSLKLAL 144
Query: 178 GLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEK 237
+WL++ +G N +TL + +L T P++YEKY+ +ID + ++K
Sbjct: 145 LMWLMTYIGAVFNGITLLILGVLLAFTTPLVYEKYKVQIDHYVSLVHSQVK--------S 196
Query: 238 VLKKVLSRIPKGALKKKD 255
+ +K+ +++P GALKKK
Sbjct: 197 ITEKIQAKLP-GALKKKS 213
>sp|Q9ES97|RTN3_MOUSE Reticulon-3 OS=Mus musculus GN=Rtn3 PE=1 SV=2
Length = 964
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 100/196 (51%), Gaps = 21/196 (10%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 778 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 835
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A +N+AL ++ + DL L +
Sbjct: 836 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 895
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ +VP++YEKY+ +ID + A + K +
Sbjct: 896 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTK--------SI 947
Query: 239 LKKVLSRIPKGALKKK 254
++K+ +++P G KKK
Sbjct: 948 VEKIQAKLP-GIAKKK 962
>sp|Q6RJR6|RTN3_RAT Reticulon-3 OS=Rattus norvegicus GN=Rtn3 PE=1 SV=1
Length = 940
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 100/196 (51%), Gaps = 21/196 (10%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K + V G T + +L L + +I++V ++ ++LS+ + F ++ + +
Sbjct: 754 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 811
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P +TL + + +A +N+AL ++ + DL L +
Sbjct: 812 QKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 871
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L+ +VP++YEKY+ +ID + A + K +
Sbjct: 872 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTK--------SI 923
Query: 239 LKKVLSRIPKGALKKK 254
++K+ +++P G KKK
Sbjct: 924 VEKIQAKLP-GIAKKK 938
>sp|Q28D16|RTN3_XENTR Reticulon-3 OS=Xenopus tropicalis GN=rtn3 PE=2 SV=1
Length = 213
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 21/197 (10%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLF---LWSNASTFI 125
D+ WR+ K S V GG M +L L + +I+++ ++ + LAV ++ + +
Sbjct: 27 DLLYWRDVKQSGMVFGGT--MVLLLSLAAFSIISVISYLVLSLLAVTISYRVYKSVLQAV 84
Query: 126 NKSPPEIPVVTLPEKFVL----EFASALRYE---INRALAVLREIASGRDLKKFLGVIAG 178
K+ P L EK + F AL +N AL + + DL L +
Sbjct: 85 QKTDEGHPFKPLLEKDIALSSDAFQKALSTSLAHVNHALKYIVRLFLVEDLVDSLKLALL 144
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L T P++YEKY+ +ID + +K +
Sbjct: 145 MWLMTYVGAVFNGITLLILGVLLAFTAPIVYEKYKVQIDHYVSLVHSHVK--------SI 196
Query: 239 LKKVLSRIPKGALKKKD 255
+K+ +++P GALKKK
Sbjct: 197 TEKIQAKLP-GALKKKS 212
>sp|Q5J6M8|RTN3A_XENLA Reticulon-3-A OS=Xenopus laevis GN=rtn3-a PE=2 SV=2
Length = 214
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 21/197 (10%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHI--SILSLAVLF-LWSNASTFI 125
D+ WR+ K S V GG M +L L + +I+++ ++ S+L++ + + ++ + +
Sbjct: 28 DLLYWRDVKQSGMVFGGT--MVLLLSLAAFSIISVISYLVLSLLTVTISYRVYKSVLQAV 85
Query: 126 NKSPPEIPVVTLPEKFVL----EFASALRYE---INRALAVLREIASGRDLKKFLGVIAG 178
K+ P L EK + F AL +N AL + + DL L +
Sbjct: 86 QKTDEGHPFKPLLEKDITLSSDSFQKALTASLAHVNHALKYIVRLFLVDDLVDSLKLALL 145
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+WL++ VG N +TL + +L T P++YEKY+ +ID + ++K +
Sbjct: 146 MWLMTYVGAVFNGITLLILGVLLTFTAPIVYEKYKVQIDHYVSLVHSQVK--------SI 197
Query: 239 LKKVLSRIPKGALKKKD 255
+K+ +++P GALKKK
Sbjct: 198 TEKIQAKLP-GALKKKS 213
>sp|Q99P72|RTN4_MOUSE Reticulon-4 OS=Mus musculus GN=Rtn4 PE=1 SV=2
Length = 1162
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 22/196 (11%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 977 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1034
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1035 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1094
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L ++PVIYE+++ +ID + A +K A
Sbjct: 1095 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYLGLANKSVKDAMA------ 1148
Query: 239 LKKVLSRIPKGALKKK 254
K+ ++IP LK+K
Sbjct: 1149 --KIQAKIP--GLKRK 1160
>sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2
Length = 1192
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 97/196 (49%), Gaps = 22/196 (11%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 1007 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1064
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1065 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1124
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L +VPVIYE+++ +ID + A +K A
Sbjct: 1125 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMA------ 1178
Query: 239 LKKVLSRIPKGALKKK 254
K+ ++IP LK+K
Sbjct: 1179 --KIQAKIP--GLKRK 1190
>sp|Q9JK11|RTN4_RAT Reticulon-4 OS=Rattus norvegicus GN=Rtn4 PE=1 SV=1
Length = 1163
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 22/196 (11%)
Query: 69 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISI--LSLAVLF-LWSNASTFI 125
D+ WR+ K GV+ GA+ +++L L + ++++ +I++ LS+ + F ++ I
Sbjct: 978 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1035
Query: 126 NKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAG 178
KS P V + E+ V +++++ +N + LR + DL L
Sbjct: 1036 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1095
Query: 179 LWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKV 238
+W+ + VG N +TL + + L ++PVIYE+++ +ID + A +K A
Sbjct: 1096 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMA------ 1149
Query: 239 LKKVLSRIPKGALKKK 254
K+ ++IP LK+K
Sbjct: 1150 --KIQAKIP--GLKRK 1161
>sp|Q5IS59|RTN1_PANTR Reticulon-1 OS=Pan troglodytes GN=RTN1 PE=2 SV=1
Length = 776
Score = 50.8 bits (120), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 135 VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTL 194
+TL ++ + ++ L++ +N L LR + +DL L +WLL+ VG N +TL
Sbjct: 665 ITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTL 724
Query: 195 FYIVFVLLHTVPVIYEKYEDKIDSF 219
+ V + T+PV+Y K++ +ID +
Sbjct: 725 LLMAVVSMFTLPVVYVKHQAQIDQY 749
>sp|Q16799|RTN1_HUMAN Reticulon-1 OS=Homo sapiens GN=RTN1 PE=1 SV=1
Length = 776
Score = 50.8 bits (120), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 135 VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTL 194
+TL ++ + ++ L++ +N L LR + +DL L +WLL+ VG N +TL
Sbjct: 665 ITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTL 724
Query: 195 FYIVFVLLHTVPVIYEKYEDKIDSF 219
+ V + T+PV+Y K++ +ID +
Sbjct: 725 LLMAVVSMFTLPVVYVKHQAQIDQY 749
>sp|A7MC64|RTN1_XENTR Reticulon-1 OS=Xenopus tropicalis GN=rtn1 PE=2 SV=2
Length = 764
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 62 LGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLF---LW 118
L K ++ WR+ K + V G + + +LF L ++ +++++ ++++ +L+ ++
Sbjct: 573 LSKRKAIELLYWRDIKQTGIVFG--SVLLMLFSLTQFSVVSVIAYLALAALSATISFRIY 630
Query: 119 SNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKK 171
+ + K+ P ++L ++ + ++ L+ N + LR + +DL
Sbjct: 631 KSVLQAVQKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQAYTNSIVKELRRLFLVQDLVD 690
Query: 172 FLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
L +WLL+ VG N +TL + V + ++PV+Y+KY+ +ID +
Sbjct: 691 SLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQY 738
>sp|Q5MY90|RTN1B_XENLA Reticulon-1-B OS=Xenopus laevis GN=rtn1-b PE=2 SV=1
Length = 752
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 43 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLIT 102
A++SKV + P K D+ WR+ K + V G + + +LF L + +++
Sbjct: 542 AYQSKVIGMTSILGPKPLTFFKKKAIDLLYWRDVKQTGIVFG--SILLMLFSLTLFSVVS 599
Query: 103 LVCHISILSLAVLF---LWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYE 152
++ ++++ +L+ ++ + + K+ P ++L ++ + ++ +
Sbjct: 600 VIAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKSYLDIEISLSQEQIQKYTGCFQLY 659
Query: 153 INRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKY 212
N LR + +DL L +WLL+ VG N +TL + V + ++PV+Y+KY
Sbjct: 660 TNSIAKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKY 719
Query: 213 EDKIDSF 219
+ +ID +
Sbjct: 720 QAQIDQY 726
>sp|Q6IFY7|RTN1A_XENLA Reticulon-1-A OS=Xenopus laevis GN=rtn1-a PE=2 SV=1
Length = 207
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 66 KPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLF---LWSNAS 122
+ D+ WR+ K + V G M LF L+++ +++++ ++++ +L+ ++ +
Sbjct: 20 QAIDLLYWRDIKQTGIVFGSVLLM--LFSLIQFSVVSVMAYLALAALSATISFRIYKSVL 77
Query: 123 TFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGV 175
+ K+ P ++L ++ + ++ L+ N LR + +DL L
Sbjct: 78 QAVQKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDSLKF 137
Query: 176 IAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+WLL+ VG N +TL + V + ++PV+Y+KY+ +ID +
Sbjct: 138 AVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQY 181
>sp|Q8K0T0|RTN1_MOUSE Reticulon-1 OS=Mus musculus GN=Rtn1 PE=1 SV=1
Length = 780
Score = 48.9 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 135 VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTL 194
+TL ++ + ++ L+ +N L LR + +DL L +WLL+ VG N +TL
Sbjct: 669 ITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTL 728
Query: 195 FYIVFVLLHTVPVIYEKYEDKIDSF 219
+ V + T+PV+Y K++ ++D +
Sbjct: 729 LLMAVVSMFTLPVVYVKHQAQVDQY 753
>sp|Q64548|RTN1_RAT Reticulon-1 OS=Rattus norvegicus GN=Rtn1 PE=2 SV=1
Length = 777
Score = 48.9 bits (115), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 135 VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTL 194
+TL ++ + ++ L+ +N L LR + +DL L +WLL+ VG N +TL
Sbjct: 666 ITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTL 725
Query: 195 FYIVFVLLHTVPVIYEKYEDKIDSF 219
+ V + T+PV+Y K++ ++D +
Sbjct: 726 LLMAVVSMFTLPVVYVKHQAQVDQY 750
>sp|O70622|RTN2_MOUSE Reticulon-2 OS=Mus musculus GN=Rtn2 PE=1 SV=1
Length = 471
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 68 ADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAV---LFLWSNASTF 124
AD+ W++ + S V G M L LL + ++++ H+++L L L ++
Sbjct: 273 ADLLYWKDTRTSGAVFTGL--MASLLCLLHFSIVSVAAHLALLGLCATISLRVYRKVLQA 330
Query: 125 INKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIA 177
+++ P +TL + + + + LR DL L +
Sbjct: 331 VHRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDSLKLAL 390
Query: 178 GLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
++L+ VG N +TL + V L TVP++Y +++ +ID +
Sbjct: 391 LFYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQY 432
>sp|A9X4U2|HSDD3_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3
OS=Arabidopsis thaliana GN=3BETAHSD/D3 PE=2 SV=2
Length = 561
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 60 HVLGAGKPADIFLWRNKK---ISAGVLGGATAMWVLF--ELLEYHLITLVCHISILSLAV 114
+LG GK ADI LWRN+K +S VL W F L+ ++ V
Sbjct: 372 QLLGCGKVADILLWRNEKKTFVSFLVL-NLFYYWFFFSGNTFTSSAAQLLFIFAVALYGV 430
Query: 115 LFLWSNASTF-INKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFL 173
F+ S F +NK PP + E V + +S + N+ + + ++SG D KF
Sbjct: 431 SFVPSKIFGFQVNKIPPW--RFEISESAVRDLSSDIVVVWNQGVRSFKSLSSGGDWIKFF 488
Query: 174 GVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYE 213
+ L+LL ++ + + + V T IYE+YE
Sbjct: 489 KIAGSLYLLKLIVSR-SLAAFLFTVMSFSFTGFFIYEQYE 527
>sp|Q4FZ58|RTN2_XENTR Reticulon-2 OS=Xenopus tropicalis GN=rtn2 PE=2 SV=2
Length = 321
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 53 GREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSL 112
+ +P V A K D+ WR+ +SAG L G T L L ++ +I++ + ++ L
Sbjct: 122 AKPQPQLEVFRAVK--DLLYWRDILLSAGCLTGVT--LSLLCLSQFSVISVFAYGCLIIL 177
Query: 113 AV---LFLWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLRE 162
+V L L++ + + P + L K E + + ++ + LR
Sbjct: 178 SVTLTLRLYTKLLHALKRGNGANPFQYYLDADLKLTTKQAEEITARVLSLLSTTICTLRS 237
Query: 163 IASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+ +LK L + ++LL+ VG N +T+ + + T P++Y++++ ++D +
Sbjct: 238 LFLVEELKDSLKFLVIIYLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHY 294
>sp|Q04947|RTN1_YEAST Reticulon-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RTN1 PE=1 SV=1
Length = 295
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 37/182 (20%)
Query: 68 ADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNAS-TFIN 126
D+ LWRN + GG+ + L L + +LIT L +A L++ S F++
Sbjct: 21 CDLLLWRNPVQTGKYFGGS--LLALLILKKVNLITF-----FLKVAYTILFTTGSIEFVS 73
Query: 127 K-----------SPPEIPVVTLPEKFVLEFASALRYEINRAL-------AVLREIASGRD 168
K P E P + A ++ I+ AL A +R+ +
Sbjct: 74 KLFLGQGLITKYGPKECPNI----------AGFIKPHIDEALKQLPVFQAHIRKTVFAQV 123
Query: 169 LKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIK 228
K L+LL +W + T+ ++ + T+PVIY Y+ +ID+ + +EI
Sbjct: 124 PKHTFKTAVALFLLHKFFSWFSIWTIVFVADIFTFTLPVIYHSYKHEIDATVAQG-VEIS 182
Query: 229 KQ 230
KQ
Sbjct: 183 KQ 184
>sp|Q4FZ76|RTN2_XENLA Reticulon-2 OS=Xenopus laevis GN=rtn2 PE=2 SV=1
Length = 321
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 53 GREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSL 112
+ +P V A K D+ WR+ +S G L G T L L ++ +I++ + ++ L
Sbjct: 122 AKPQPQVEVFRAVK--DLLYWRDTLLSTGCLTGVT--LSLLCLSQFSVISVFAYGCLIIL 177
Query: 113 AV---LFLWSNASTFINKSPPEIPV-------VTLPEKFVLEFASALRYEINRALAVLRE 162
+V L L++ + + P + L K E + + L LR
Sbjct: 178 SVTLTLRLYTKLLHALKRGNGANPFQYYLDTDLKLTTKQAEEIVARAFSLASTTLCTLRS 237
Query: 163 IASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
+ +LK L + ++LL+ VG N +T+ + + T P++Y++++ ++D +
Sbjct: 238 LFLVEELKDSLKFLVIVYLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHY 294
>sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2
Length = 564
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 38/186 (20%)
Query: 54 REKP--IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILS 111
RE P +LG GK AD LW++ K + A+++L + + T ++ LS
Sbjct: 369 REGPSKASRILGGGKVADTLLWKDLKQT------LIAIFILISIYYNFVATGSTVVTALS 422
Query: 112 LAVLFLWSNASTFINKSPPEIPVVTLPEK---FVLEFASALRYEI--------------- 153
A+L AS F+ LPEK + +E A ++ +
Sbjct: 423 KALLV----ASVFLFLHG------ILPEKIFGYTVEKIPASQFHLSKDSSHDLSLSVISS 472
Query: 154 -NRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKY 212
N + LR + G D F V+ L LS+ G + ++F I + ++YEK
Sbjct: 473 WNTTVKALRSLCQGNDWSFFFKVVFVLLALSLAGA-ISLHSIFVIGLPIAFLAFLVYEKK 531
Query: 213 EDKIDS 218
E +IDS
Sbjct: 532 EQEIDS 537
>sp|O67035|Y880_AQUAE UPF0278 protein aq_880 OS=Aquifex aeolicus (strain VF5) GN=aq_880
PE=3 SV=1
Length = 192
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 117 LWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAV----LREIASGRDLKKF 172
LW+ + P +T+P F+ EF LRY IN+ L + RE + D+ K
Sbjct: 61 LWAEFEMVVKIRSPRRFQLTVPADFLYEFIEELRYRINKGLRIAEEHTREASGCEDVGKL 120
Query: 173 LG 174
+
Sbjct: 121 IA 122
>sp|O75298|RTN2_HUMAN Reticulon-2 OS=Homo sapiens GN=RTN2 PE=1 SV=1
Length = 545
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 180 WLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 219
++L+ VG N +TL + + L T+P++Y +++ +ID +
Sbjct: 466 YILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQY 505
>sp|Q1LTT6|HSLV_BAUCH ATP-dependent protease subunit HslV OS=Baumannia cicadellinicola
subsp. Homalodisca coagulata GN=hslV PE=3 SV=1
Length = 180
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 30/151 (19%)
Query: 72 LWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLW------------- 118
L+ N K+ AG GG + LFEL E L + H+ ++ + W
Sbjct: 38 LYYNDKVIAGFAGGTADAFTLFELFERKLESYQGHLVKAAVELAKDWRTDRRLRRLEALL 97
Query: 119 ----SNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIA-SGRDLKKFL 173
NAS I + I PEK ++ S Y + A A+L S R++ K
Sbjct: 98 AVADENASLIITGNGDVIQ----PEKDLIAIGSGGPYAQSAARALLENTNFSAREIVK-- 151
Query: 174 GVIAGLWLLSIVGNWCNFVTLFYIVFVLLHT 204
L I G+ C + F+ + L T
Sbjct: 152 ------KSLVIAGDICIYTNQFHTIEELTST 176
>sp|A1BJ20|RS8_CHLPD 30S ribosomal protein S8 OS=Chlorobium phaeobacteroides (strain DSM
266) GN=rpsH PE=3 SV=1
Length = 131
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 133 PVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLS 183
P++ + K+ SA++ EI R R + G+D+KK+LG + GL++LS
Sbjct: 58 PIIRVDLKYGATGESAIK-EITRVSKPGRRVYDGKDIKKYLGGL-GLYILS 106
>sp|B3QR79|RS8_CHLP8 30S ribosomal protein S8 OS=Chlorobaculum parvum (strain NCIB 8327)
GN=rpsH PE=3 SV=1
Length = 133
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 123 TFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLL 182
T I + P + + K+ + A++ EI+R + R + G+D+K++LG + GL++L
Sbjct: 50 TVIKTEADKFPFIRVELKYTADGRHAIK-EISRVSSPGRRVYQGKDIKRYLGGL-GLFIL 107
Query: 183 S 183
S
Sbjct: 108 S 108
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,428,632
Number of Sequences: 539616
Number of extensions: 3962054
Number of successful extensions: 12670
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 12594
Number of HSP's gapped (non-prelim): 68
length of query: 255
length of database: 191,569,459
effective HSP length: 115
effective length of query: 140
effective length of database: 129,513,619
effective search space: 18131906660
effective search space used: 18131906660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)