Your job contains 1 sequence.
>025268
MGSETFDHFHEDKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKAL
EKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALR
LDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVSSENANAQLLT
SPPSFSPLFTGSSSSSHPSMNWVQFSDSRTILSNVYQQPQLVKVEEQSLLFNPEDPCNIF
SVDQAPTLQWYFTGH
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025268
(255 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 417 1.0e-47 3
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 408 6.7e-43 2
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 384 2.8e-40 2
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 348 9.8e-32 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 340 6.9e-31 1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 326 2.1e-29 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 325 2.7e-29 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 315 3.1e-28 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 298 1.9e-26 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 267 3.8e-23 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 251 1.9e-21 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 236 7.2e-20 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 228 5.1e-19 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 225 1.1e-18 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 221 2.8e-18 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 220 3.6e-18 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 192 3.3e-15 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 190 5.4e-15 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 191 9.8e-15 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 185 1.8e-14 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 185 1.8e-14 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 179 9.8e-14 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 180 1.3e-13 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 180 1.4e-13 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 175 2.3e-13 1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 163 3.9e-12 1
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 160 2.1e-09 1
ZFIN|ZDB-GENE-010108-2 - symbol:vent "ventral expressed h... 136 4.2e-09 1
UNIPROTKB|K7GS77 - symbol:LOC100520816 "Uncharacterized p... 147 1.8e-08 1
UNIPROTKB|F1Q361 - symbol:SHOX "Uncharacterized protein" ... 146 2.5e-08 1
UNIPROTKB|O15266 - symbol:SHOX "Short stature homeobox pr... 143 6.1e-08 1
UNIPROTKB|Q8AWG6 - symbol:hhex "Hematopoietically-express... 142 6.6e-08 1
UNIPROTKB|G3V2N9 - symbol:NOBOX "Homeobox protein NOBOX" ... 124 1.0e-07 1
UNIPROTKB|F1SG33 - symbol:LOC100520816 "Uncharacterized p... 141 1.1e-07 1
UNIPROTKB|O13023 - symbol:hhex "Hematopoietically-express... 140 1.2e-07 1
UNIPROTKB|H0YLI9 - symbol:SHOX "Short stature homeobox pr... 137 1.3e-07 1
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 145 1.9e-07 1
UNIPROTKB|H0YMR3 - symbol:SHOX "Short stature homeobox pr... 137 3.0e-07 1
UNIPROTKB|F1NFE6 - symbol:SHOX "Uncharacterized protein" ... 133 3.8e-07 1
UNIPROTKB|E2QXS9 - symbol:HHEX "Uncharacterized protein" ... 135 4.9e-07 1
UNIPROTKB|F1SC87 - symbol:HHEX "Uncharacterized protein" ... 134 6.3e-07 1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd... 117 6.6e-07 1
ZFIN|ZDB-GENE-051030-21 - symbol:shox "short stature home... 135 6.8e-07 1
UNIPROTKB|A7YWK1 - symbol:HHEX "HHEX protein" species:991... 133 8.5e-07 1
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1... 116 8.6e-07 1
WB|WBGene00000434 - symbol:ceh-9 species:6239 "Caenorhabd... 116 8.6e-07 1
UNIPROTKB|F1P169 - symbol:DBX2 "Homeobox protein DBX2" sp... 114 1.5e-06 1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 114 1.5e-06 1
UNIPROTKB|D6RAR5 - symbol:D6RAR5 "Uncharacterized protein... 114 1.5e-06 1
UNIPROTKB|G3X7M1 - symbol:SHOX "Uncharacterized protein" ... 132 1.6e-06 1
UNIPROTKB|F1NXJ0 - symbol:DBX2 "Homeobox protein DBX2" sp... 116 1.7e-06 1
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 137 1.9e-06 1
ZFIN|ZDB-GENE-010108-1 - symbol:vox "ventral homeobox" sp... 130 1.9e-06 1
UNIPROTKB|H9L2H7 - symbol:Gga.20677 "Uncharacterized prot... 113 1.9e-06 1
UNIPROTKB|H9L2H8 - symbol:Gga.20677 "Uncharacterized prot... 113 1.9e-06 1
UNIPROTKB|F8VWZ5 - symbol:HLX "H2.0-like homeobox protein... 113 1.9e-06 1
UNIPROTKB|D2H028 - symbol:PANDA_002743 "Putative uncharac... 113 1.9e-06 1
UNIPROTKB|F1PRX2 - symbol:NKX3-1 "Uncharacterized protein... 112 2.5e-06 1
UNIPROTKB|F1SHT6 - symbol:F1SHT6 "Uncharacterized protein... 112 2.5e-06 1
UNIPROTKB|G3ECA1 - symbol:HoxA10 "Homebox A10" species:98... 112 2.5e-06 1
UNIPROTKB|Q03014 - symbol:HHEX "Hematopoietically-express... 129 2.7e-06 1
UNIPROTKB|Q91975 - symbol:DBX2 "Homeobox protein DBX2" sp... 114 2.9e-06 1
UNIPROTKB|P24341 - symbol:HOXD10 "Homeobox protein Hox-D1... 111 3.2e-06 1
UNIPROTKB|F1NF72 - symbol:F1NF72 "Uncharacterized protein... 110 4.1e-06 1
UNIPROTKB|F6VMK5 - symbol:NKX3-1 "Uncharacterized protein... 110 4.1e-06 1
RGD|1305369 - symbol:Nkx3-1 "NK3 homeobox 1" species:1011... 126 4.2e-06 1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd... 117 4.6e-06 1
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 133 4.8e-06 1
WB|WBGene00000439 - symbol:ceh-16 species:6239 "Caenorhab... 121 5.1e-06 1
UNIPROTKB|P79775 - symbol:P79775 "Homeobox protein ANF-1"... 122 5.3e-06 1
ZFIN|ZDB-GENE-001206-2 - symbol:lbx2 "ladybird homeobox h... 126 5.3e-06 1
ZFIN|ZDB-GENE-031016-2 - symbol:hopx "HOP homeobox" speci... 109 5.4e-06 1
UNIPROTKB|Q0P4H6 - symbol:lbx1 "Transcription factor LBX1... 126 5.8e-06 1
UNIPROTKB|P53412 - symbol:LHX3 "LIM/homeobox protein Lhx3... 129 6.1e-06 1
UNIPROTKB|P36200 - symbol:lhx3 "LIM/homeobox protein Lhx3... 129 6.1e-06 1
RGD|619932 - symbol:Hhex "hematopoietically expressed hom... 126 6.2e-06 1
ZFIN|ZDB-GENE-990415-117 - symbol:hoxd11a "homeo box D11a... 126 6.5e-06 1
UNIPROTKB|E1C1I8 - symbol:LOC100858967 "Uncharacterized p... 122 6.6e-06 1
UNIPROTKB|F1NE15 - symbol:LOC100858551 "Uncharacterized p... 108 6.9e-06 1
UNIPROTKB|P13544 - symbol:HOXD1 "Homeobox protein Hox-D1"... 108 6.9e-06 1
MGI|MGI:97352 - symbol:Nkx3-1 "NK-3 transcription factor,... 124 7.1e-06 1
UNIPROTKB|F1PND7 - symbol:DBX2 "Uncharacterized protein" ... 122 7.1e-06 1
UNIPROTKB|O97581 - symbol:LHX3 "LIM/homeobox protein Lhx3... 128 7.6e-06 1
ZFIN|ZDB-GENE-980526-167 - symbol:eng2a "engrailed 2a" sp... 125 7.6e-06 1
ZFIN|ZDB-GENE-040724-40 - symbol:lbx1a "ladybird homeobox... 125 8.0e-06 1
UNIPROTKB|Q9UBR4 - symbol:LHX3 "LIM/homeobox protein Lhx3... 128 8.1e-06 1
UNIPROTKB|A6NLG4 - symbol:SHOX2 "cDNA FLJ38019 fis, clone... 120 8.2e-06 1
MGI|MGI:102673 - symbol:Lhx3 "LIM homeobox protein 3" spe... 128 8.2e-06 1
UNIPROTKB|G3V8E3 - symbol:Lhx3 "Protein Lhx3" species:101... 128 8.2e-06 1
UNIPROTKB|G3V9E7 - symbol:Lhx3 "RCG45383, isoform CRA_b" ... 128 8.3e-06 1
UNIPROTKB|Q2TEA4 - symbol:Lhx3 "LIM homeodomain 3 protein... 128 8.3e-06 1
UNIPROTKB|F1NHM4 - symbol:CDX4 "Uncharacterized protein" ... 107 8.9e-06 1
UNIPROTKB|F1MJX0 - symbol:CDX2 "Uncharacterized protein" ... 107 8.9e-06 1
UNIPROTKB|P51783 - symbol:HOXA9 "Homeobox protein Hox-A9"... 114 1.0e-05 1
ZFIN|ZDB-GENE-040426-1457 - symbol:shox2 "short stature h... 125 1.0e-05 1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot... 106 1.2e-05 1
UNIPROTKB|P24340 - symbol:HOXD9 "Homeobox protein Hox-D9"... 106 1.2e-05 1
RGD|1563929 - symbol:Nobox "NOBOX oogenesis homeobox" spe... 126 1.2e-05 2
TAIR|locus:2135368 - symbol:PDF2 "AT4G04890" species:3702... 130 1.2e-05 1
TAIR|locus:2127008 - symbol:ANL2 "ANTHOCYANINLESS 2" spec... 130 1.3e-05 1
WARNING: Descriptions of 408 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 417 (151.9 bits), Expect = 1.0e-47, Sum P(3) = 1.0e-47
Identities = 88/160 (55%), Positives = 122/160 (76%)
Query: 12 DKTSTKRKQIYGREFQAMMDCLEEED--CREEASQA--TEKKRRLTVDQVKALEKNFEVD 67
D+ S +R GREFQ+M++ EEE+ EE +EKKRRL+++QVKALEKNFE++
Sbjct: 24 DEQSPRRYG--GREFQSMLEGYEEEEEAIVEERGHVGLSEKKRRLSINQVKALEKNFELE 81
Query: 68 NKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQ 127
NKLEP+RKVKLA+ELGLQPRQ+AVWFQNRRAR K+K+LE+DYG+LK YD+LR ++++L+
Sbjct: 82 NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLR 141
Query: 128 QENEALTAELRELKAKLC-----QENEETSHAVEAEAPVS 162
++NE+L E+ +LK KL +E EE + AV E+ +S
Sbjct: 142 RDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDIS 181
Score = 73 (30.8 bits), Expect = 1.0e-47, Sum P(3) = 1.0e-47
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 214 NVYQQPQLVKVEEQSLLFNPEDPCNIFSVDQAPTLQWYFT 253
N +Q ++ + E+ + E+ C FS +Q P+L WY T
Sbjct: 267 NFFQFVKMEQTEDHEDFLSGEEACEFFSDEQPPSLHWYST 306
Score = 37 (18.1 bits), Expect = 1.0e-47, Sum P(3) = 1.0e-47
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 148 NEETSHAVEAEAPVSEQSKN 167
NEE+S V APV+ N
Sbjct: 248 NEESSSNVTVAAPVTVPGGN 267
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 408 (148.7 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 86/156 (55%), Positives = 118/156 (75%)
Query: 25 EFQAMMDCLEEEDCREE-------ASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVK 77
++ M D LE++ E+ +S A EKKRRL V+QVKALEKNFE+DNKLEP+RKVK
Sbjct: 42 DYSQMFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVK 101
Query: 78 LAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAEL 137
LA+ELGLQPRQ+A+WFQNRRAR K+K+LERDYG+LK+N+DAL+ + ++LQ++N++L ++
Sbjct: 102 LAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQI 161
Query: 138 RELKAKLCQENE---ETSHAVEA-EAPVSEQSKNHV 169
+ELKAKL E E + A++A EA S + N V
Sbjct: 162 KELKAKLNVEGVKGIEENGALKAVEANQSVMANNEV 197
Score = 62 (26.9 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 220 QLVKVEEQSLLFNPEDPCNIFSVDQAPTLQWY 251
Q VK+EE LF+ E+ C +F+ ++ QWY
Sbjct: 278 QFVKMEEHEDLFSGEEACKLFADNE----QWY 305
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 384 (140.2 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 79/157 (50%), Positives = 114/157 (72%)
Query: 22 YGREFQAMMDCLEEEDCR-EEASQ------ATEKKRRLTVDQVKALEKNFEVDNKLEPDR 74
YG +Q+M++ +E+ EE S +EKKRRL VDQVKALEKNFE++NKLEP+R
Sbjct: 26 YGSNYQSMLEGYDEDATLIEEYSGNHHHMGLSEKKRRLKVDQVKALEKNFELENKLEPER 85
Query: 75 KVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALT 134
K KLA+ELGLQPRQ+AVWFQNRRAR K+K+LE+DYG+LK YD+LR ++++L+++N++L
Sbjct: 86 KTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLL 145
Query: 135 AELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVSS 171
E+ ++KAK+ E + ++ E V E+ + S
Sbjct: 146 QEISKIKAKVNGEEDNNNNKAITEG-VKEEEVHKTDS 181
Score = 61 (26.5 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 223 KVEEQSLLFNPEDPCNIFSVDQAPTLQWY 251
+ E+ + E+ C FS +Q P+L WY
Sbjct: 259 QTEDHEDFLSGEEACGFFSDEQPPSLHWY 287
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 73/139 (52%), Positives = 97/139 (69%)
Query: 35 EEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQ 94
EED ++ SQ EKKRRL ++QVK LEKNFE+ NKLEP+RK++LA LGLQPRQIA+WFQ
Sbjct: 72 EEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQ 131
Query: 95 NRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHA 154
NRRAR K+K+LE+DY LK +D L+ + + LQ N+ L AE+ LK + ++ E +
Sbjct: 132 NRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNR--EQTESINLN 189
Query: 155 VEAEAPVSEQSKNHVSSEN 173
E E S +S N SS+N
Sbjct: 190 KETEGSCSNRSDN--SSDN 206
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 70/141 (49%), Positives = 99/141 (70%)
Query: 24 REFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELG 83
R F + + L ++D ++ Q EKKRRLT +QV LEK+FE +NKLEP+RK +LA++LG
Sbjct: 46 RPFFSSPEDLYDDDFYDD--QLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLG 103
Query: 84 LQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAK 143
LQPRQ+AVWFQNRRAR K+K+LERDY LLK+ YD L +Y+++ +N+ L +E+ L K
Sbjct: 104 LQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEK 163
Query: 144 LCQENEETSHAVEAEAPVSEQ 164
L Q +ET++ + P Q
Sbjct: 164 L-QGKQETANEPPGQVPEPNQ 183
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 69/142 (48%), Positives = 96/142 (67%)
Query: 33 LEEEDCREEASQAT--EKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIA 90
L+EE+ ++ + EKK+RL ++QVKALEK+FE+ NKLEP+RK++LA+ LG+QPRQIA
Sbjct: 70 LDEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIA 129
Query: 91 VWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEE 150
+WFQNRRAR K+++LERDY LK +++L+ D +L N+ L AE+ LK K C E
Sbjct: 130 IWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALKNKECNEGNI 189
Query: 151 TSHAVEAEAPVSEQSKNHVSSE 172
EAEA S SS+
Sbjct: 190 VKR--EAEASWSNNGSTENSSD 209
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 66/138 (47%), Positives = 99/138 (71%)
Query: 30 MDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQI 89
+D +E+ ++ S+ EKKRRL ++Q+KALEK+FE+ NKLE DRK++LA LGLQPRQI
Sbjct: 53 LDMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQI 112
Query: 90 AVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENE 149
A+WFQNRRAR K+K+LE+DY +LK +++LR + LQ +N+ L A++ LK++ + E
Sbjct: 113 AIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSR--EPIE 170
Query: 150 ETSHAVEAEAPVSEQSKN 167
+ E E S++S+N
Sbjct: 171 SINLNKETEGSCSDRSEN 188
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 68/144 (47%), Positives = 97/144 (67%)
Query: 34 EEEDCREEASQAT--EKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAV 91
EE++ ++ S EKK+RL ++QV+ALEK+FE+ NKLEP+RK++LA+ LGLQPRQIA+
Sbjct: 99 EEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAI 158
Query: 92 WFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEET 151
WFQNRRAR K+K+LERDY LK +D L+ D ++L N+ L AEL LK + + +
Sbjct: 159 WFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALK----KHDRKE 214
Query: 152 SHAVEAEAPVSEQSKNHVSSENAN 175
S ++ E + S N + N N
Sbjct: 215 SAKIKREFAEASWSNNGSTENNHN 238
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 57/134 (42%), Positives = 88/134 (65%)
Query: 40 EEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR 99
++++ +RR + +Q+K+LE FE + +LEP +KV+LA ELGLQPRQ+A+WFQN+RAR
Sbjct: 24 KKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRAR 83
Query: 100 LKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEA 159
KSK+LE +Y +L+ NYD L + +L++E +AL +EL+ LK ++ +E +
Sbjct: 84 WKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQ 143
Query: 160 PVSEQSKNHVSSEN 173
V S H SEN
Sbjct: 144 AVVALSSTHHESEN 157
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 50/135 (37%), Positives = 88/135 (65%)
Query: 46 TEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKEL 105
+ ++R + +Q+K+LE FE + +LEP +KV++A ELGLQPRQ+A+WFQN+RAR K+K+L
Sbjct: 28 SNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQL 87
Query: 106 ERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAV--EAEAPVSE 163
E++Y L+ANY+ L + +++E ++L +EL+ L ++ + EE H + +S
Sbjct: 88 EKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHECCGDQGLALSS 147
Query: 164 QSKNHVSSENANAQL 178
+++H +L
Sbjct: 148 STESHNGKSEPEGRL 162
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 59/132 (44%), Positives = 82/132 (62%)
Query: 48 KKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELER 107
KK+RLT Q+ +LE++F+ + KL+ DRKVKL+ ELGLQPRQIAVWFQNRRAR K+K+LE+
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136
Query: 108 DYGLLKANYDALRLDYNNLQQENEALTAELRE---LKAKLCQENEETSHAVEAEAPVSEQ 164
Y L+ YD + + L E + L A LR+ +K ++ + S E +S
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTIKVS-GEEDTVEISSV 195
Query: 165 SKNHVSSENANA 176
H +EN NA
Sbjct: 196 VVAHPRTENMNA 207
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 59/141 (41%), Positives = 85/141 (60%)
Query: 35 EEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQ 94
EED E +KR+LT +QV LE +F ++KLE RK K+A ELGL PRQ+AVWFQ
Sbjct: 60 EEDVAEIGGML--RKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQ 117
Query: 95 NRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHA 154
NRRAR K+K+LE +Y LK ++D + L L+ + LT +L E ++++ + S
Sbjct: 118 NRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEI----RKLSER 173
Query: 155 VEAEAPVSEQSKN-HVSSENA 174
+E E P + S + V + NA
Sbjct: 174 LE-EMPTNSSSSSLSVEANNA 193
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 50/115 (43%), Positives = 74/115 (64%)
Query: 48 KKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELER 107
+KR+LT +QV LE +F ++KLE +RK +LA ELGL PRQ+AVWFQNRRAR K+K LE
Sbjct: 55 RKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEE 114
Query: 108 DYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVS 162
+Y LK ++D + +D L+ E L +L + + ++ Q E + +P+S
Sbjct: 115 EYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREI-QRLAERVEGGSSNSPIS 168
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 46/102 (45%), Positives = 69/102 (67%)
Query: 43 SQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKS 102
SQ KK+RLT DQV+ LEK F ++ KLEPD K++L+ +LGL RQ+AVWFQN+RAR K+
Sbjct: 6 SQGKNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKT 65
Query: 103 KELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKL 144
+ LE + L++ ++A D L+ + + L EL+ + +L
Sbjct: 66 QSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQL 107
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 57/148 (38%), Positives = 90/148 (60%)
Query: 6 FDHFHEDKTSTKRKQIYGREFQAMMD---CLEEEDCREEASQAT---EKKRRLTVDQVKA 59
FDHF ++ + + G + Q ++ + E EE++ +KK+++T +Q+K
Sbjct: 24 FDHFSGNQDNRCLGTMMGAQ-QDILHVPLAMVESGYGEESNSFNGQEKKKKKMTSEQLKF 82
Query: 60 LEKNFEVD---N-----KLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGL 111
LE++F+ + N KL PDRK+KL++ELGLQPRQIAVWFQNR+AR K+K+LE Y
Sbjct: 83 LERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEHLYES 142
Query: 112 LKANYDALRLDYNNLQQENEALTAELRE 139
L+ +D + + LQ+E L + +RE
Sbjct: 143 LRQEFDIVSREKELLQEELIQLKSMIRE 170
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 51/126 (40%), Positives = 76/126 (60%)
Query: 48 KKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELER 107
+KR+L+ +QV+ LE +FE D+KLE +RK +LA ELGL PRQ+AVWFQNRRAR K+K +E
Sbjct: 61 RKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVED 120
Query: 108 DYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQ--- 164
+Y LK Y+ ++ L E L +L E + ++ Q + + +P+S
Sbjct: 121 EYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREI-QRLAKRVEGTLSNSPISSSVTI 179
Query: 165 SKNHVS 170
NH +
Sbjct: 180 EANHTT 185
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 49/112 (43%), Positives = 63/112 (56%)
Query: 36 EDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQN 95
+D +E + KK RLT Q LE NF++ + L P +K LA +L L+PRQ+ VWFQN
Sbjct: 114 DDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQN 173
Query: 96 RRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKA-KLCQ 146
RRAR K K+ E D LK + L EN L EL++LKA KL Q
Sbjct: 174 RRARTKLKQTEVDCEFLKKCCETLT-------DENRRLQKELQDLKALKLSQ 218
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 51/108 (47%), Positives = 63/108 (58%)
Query: 34 EEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
EEED E + KK RL+ DQ LE F+ N L P +K+ LA++LGL RQ+ VWF
Sbjct: 124 EEEDYGGETCR---KKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWF 180
Query: 94 QNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELK 141
QNRRAR K K+ E D LK + +L N + E EA AELR LK
Sbjct: 181 QNRRARTKLKQTEVDCEYLKRCVE--KLTEENRRLEKEA--AELRALK 224
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 191 (72.3 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 46/106 (43%), Positives = 65/106 (61%)
Query: 36 EDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQN 95
ED ++ + +T KK RL+ DQ LE +F+ + L P +K+ LA++L L+PRQ+ VWFQN
Sbjct: 179 ED-NDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQN 237
Query: 96 RRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELK 141
RRAR K K+ E D LK ++L + LQ+E ELR LK
Sbjct: 238 RRARTKLKQTEVDCEYLKRCCESLTEENRRLQKE----VKELRTLK 279
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 45/109 (41%), Positives = 65/109 (59%)
Query: 34 EEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
+EE ++ S KK RLT +Q + LE +F ++ L P +K LA+ L L+PRQI VWF
Sbjct: 125 DEEFSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWF 184
Query: 94 QNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKA 142
QNRRAR K K+ E ++ Y L+ + +L +EN L E+ EL+A
Sbjct: 185 QNRRARSKLKQTE-----MECEY--LKRWFGSLTEENHRLHREVEELRA 226
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 46/105 (43%), Positives = 62/105 (59%)
Query: 37 DCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNR 96
D E+ + + KK RL+ DQ LE+ F+ N L P +K+ LA++L L RQ+ VWFQNR
Sbjct: 119 DEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNR 178
Query: 97 RARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELK 141
RAR K K+ E D LK + L + LQ+E A+ ELR LK
Sbjct: 179 RARTKLKQTEVDCEYLKRCVEKLTEENRRLQKE--AM--ELRTLK 219
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 179 (68.1 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 44/103 (42%), Positives = 60/103 (58%)
Query: 40 EEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR 99
+E + KK RL+ DQ LE+ F+ + L P +K LA++LGL+ RQ+ VWFQNRRAR
Sbjct: 121 DEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRAR 180
Query: 100 LKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKA 142
K K+ E D + LR NL +EN L E+ EL+A
Sbjct: 181 TKLKQTEVDC-------EFLRRCCENLTEENRRLQKEVTELRA 216
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 180 (68.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 43/108 (39%), Positives = 63/108 (58%)
Query: 34 EEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
++ED ++ KK RL+ +Q LE+ F+ + L P +K+ LA++L L+ RQ+ VWF
Sbjct: 148 DDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWF 207
Query: 94 QNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELK 141
QNRRAR K K+ E D LK + L + LQ+E +ELR LK
Sbjct: 208 QNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKE----VSELRALK 251
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 180 (68.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 43/97 (44%), Positives = 58/97 (59%)
Query: 46 TEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKEL 105
+ KK RL+ DQ LE+ F+ + L P +K+ LA++L L+ RQ+ VWFQNRRAR K K+
Sbjct: 161 SRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQT 220
Query: 106 ERDYGLLKANYDALRLDYNNLQQENEALTAELRELKA 142
E D LK D NL +EN L E+ EL+A
Sbjct: 221 EVDCEYLKRCCD-------NLTEENRRLQKEVSELRA 250
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 175 (66.7 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 53/134 (39%), Positives = 69/134 (51%)
Query: 17 KRKQIYGREFQAMMDCLEE--EDCRE-EASQATEKKRRLTVDQVKALEKNFEVDNKLEPD 73
KR++ G E + E D E E + KK RLT Q LE++F+ + L P
Sbjct: 79 KRERDGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPK 138
Query: 74 RKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEAL 133
+K LA +L L+PRQ+ VWFQNRRAR K K+ E D LK + L EN L
Sbjct: 139 QKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLA-------DENIRL 191
Query: 134 TAELRELKA-KLCQ 146
E++ELK KL Q
Sbjct: 192 QKEIQELKTLKLTQ 205
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 59/182 (32%), Positives = 84/182 (46%)
Query: 2 GSETFDHFHEDKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALE 61
G FD KT R+ + G + E+D + KK RLT +Q LE
Sbjct: 30 GMRDFDINQTPKTEEDREWMIGATPH-----VNEDDSNSGGRR--RKKLRLTKEQSHLLE 82
Query: 62 KNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRL 121
++F ++ L P +K LA L L RQ+ VWFQNRRAR K K E + LK + +L+
Sbjct: 83 ESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKE 142
Query: 122 DYNNLQQENEALTAELRELKAKL--CQENEET-------SHAVEAEAPVSEQSKNHVSSE 172
LQ E E L A + L C E S+AV+ A +S +S+ +SS
Sbjct: 143 QNRRLQIEVEELRALKPSSTSALTMCPRCERVTDAVDNDSNAVQEGAVLSSRSRMTISSS 202
Query: 173 NA 174
++
Sbjct: 203 SS 204
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 160 (61.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 46/150 (30%), Positives = 75/150 (50%)
Query: 35 EEDCREEASQATEKKR--RLTVDQVKALEKNFEVDNKLEPDRK--VKLAEELGLQPRQIA 90
E E+ A +KKR R T Q++ +E F+ +N PD K ++L+++LGL P Q+
Sbjct: 76 ENTAIEQEPPAAKKKRYHRHTASQIQQMEALFK-ENA-HPDTKTRLRLSKKLGLSPIQVK 133
Query: 91 VWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAE-----LRELKAKLC 145
WFQN+R ++K+++ D LKA + L+ + N+Q + L LR A+L
Sbjct: 134 FWFQNKRTQIKAQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCGHNLRLENARLR 193
Query: 146 QENEETSHAVEAEAPVSEQSKNHVSSENAN 175
QE + V P Q +++N N
Sbjct: 194 QELDRLRSIVSMRNPSPSQEITPETNKNNN 223
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/150 (23%), Positives = 69/150 (46%)
Query: 39 REEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRA 98
+E + ++ R T Q++ +E F+ + + +++L+++LGL P Q+ WFQN+R
Sbjct: 82 QEPPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRT 141
Query: 99 RLKSKELERDYGLLKANYDALRLDYNNLQQ----------------ENEALTAELRELKA 142
++K+++ D LKA + L+ + N+Q EN L EL L++
Sbjct: 142 QIKAQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCGHNLRLENARLRQELDRLRS 201
Query: 143 KLCQENEETSHAVEAEAPVSEQSKNHVSSE 172
+ N S + E + ++ E
Sbjct: 202 IVSMRNPSPSQEITPETNKNNNDNMLIAEE 231
>ZFIN|ZDB-GENE-010108-2 [details] [associations]
symbol:vent "ventral expressed homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI] [GO:0042661
"regulation of mesodermal cell fate specification" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-010108-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0009953 HSSP:P06602 GO:GO:0042661 eggNOG:NOG150160
GeneTree:ENSGT00610000086217 OrthoDB:EOG44TP97 EMBL:CABZ01072677
EMBL:AF255044 EMBL:AF277077 IPI:IPI00511939 RefSeq:NP_571775.1
UniGene:Dr.106743 STRING:Q9DGM9 Ensembl:ENSDART00000017456
GeneID:64810 KEGG:dre:64810 CTD:64810 HOGENOM:HOG000206355
InParanoid:Q9DGM9 OMA:RRMRTKF NextBio:20901999 Uniprot:Q9DGM9
Length = 170
Score = 136 (52.9 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 33 LEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVW 92
+E +D EA Q + + T DQ+ LEK+F L ++ K+AE+L L Q+ W
Sbjct: 52 VESDDSEVEAGQNRRVRTKFTCDQISGLEKSFSKHRYLGATQRRKIAEKLHLSETQVKTW 111
Query: 93 FQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQEN 130
FQNRR +LK +E++ D Y A+ +LQ ++
Sbjct: 112 FQNRRMKLK-REVQ-DMRAADFLYPAVFPPMTSLQHQS 147
>UNIPROTKB|K7GS77 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:FP015869 GeneID:100520816 RefSeq:XP_003134962.1
Ensembl:ENSSSCT00000035048 Uniprot:K7GS77
Length = 292
Score = 147 (56.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 46/158 (29%), Positives = 82/158 (51%)
Query: 7 DHFHEDKTSTKRKQIYGREFQAMMDCLEE-EDCR--EEASQATEKKRR----LTVDQVKA 59
DH DK K GR + + DC ++ ED + +E Q K+RR T++Q+
Sbjct: 73 DHVDNDKDKLKEFGT-GRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNE 131
Query: 60 LEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLL---KANY 116
LE+ F+ + + + +L++ LGL ++ VWFQNRRA+ + +E + G++ ++
Sbjct: 132 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHL 191
Query: 117 DALRL-DYNNLQQENEALTAELRELKAKLCQENEETSH 153
DA R+ Y N+ AL ++++A+L E +H
Sbjct: 192 DACRVAPYVNMG----ALRMPFQQVQAQLQLEGVAHAH 225
>UNIPROTKB|F1Q361 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 OMA:SNHCPVH
EMBL:AAEX03026084 Ensembl:ENSCAFT00000017459 Uniprot:F1Q361
Length = 291
Score = 146 (56.5 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 46/158 (29%), Positives = 82/158 (51%)
Query: 7 DHFHEDKTSTKRKQIYGREFQAMMDCLEE-EDCR--EEASQATEKKRR----LTVDQVKA 59
DH DK K GR + + +C E+ ED + +E Q K+RR T++Q+
Sbjct: 72 DHVDSDKDKLKEFGT-GRAAEGVYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNE 130
Query: 60 LEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLL---KANY 116
LE+ F+ + + + +L++ LGL ++ VWFQNRRA+ + +E + G++ ++
Sbjct: 131 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHL 190
Query: 117 DALRL-DYNNLQQENEALTAELRELKAKLCQENEETSH 153
DA R+ Y N+ AL ++++A+L E +H
Sbjct: 191 DACRVAPYVNMG----ALRMPFQQVQAQLQLEGVAHAH 224
>UNIPROTKB|O15266 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
Orphanet:137693 eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331
OrthoDB:EOG41C6X2 EMBL:Y11536 EMBL:Y11535 EMBL:U82668 EMBL:U89331
EMBL:BX004827 IPI:IPI00005744 IPI:IPI00411417 RefSeq:NP_000442.1
RefSeq:NP_006874.1 UniGene:Hs.105932 ProteinModelPortal:O15266
SMR:O15266 IntAct:O15266 STRING:O15266 PhosphoSite:O15266
PRIDE:O15266 DNASU:6473 Ensembl:ENST00000334060
Ensembl:ENST00000381575 Ensembl:ENST00000381578
Ensembl:ENST00000554971 GeneID:6473 KEGG:hsa:6473 UCSC:uc004cph.1
UCSC:uc004cpi.3 CTD:6473 GeneCards:GC0XP000585 HGNC:HGNC:10853
MIM:127300 MIM:249700 MIM:300582 MIM:312865 MIM:400020
neXtProt:NX_O15266 Orphanet:2632 Orphanet:240 PharmGKB:PA134978644
InParanoid:O15266 OMA:SNHCPVH PhylomeDB:O15266 GenomeRNAi:6473
NextBio:25145 Bgee:O15266 CleanEx:HS_SHOX Genevestigator:O15266
Uniprot:O15266
Length = 292
Score = 143 (55.4 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 47/158 (29%), Positives = 82/158 (51%)
Query: 7 DHFHEDKTSTKRKQIYGREFQAMMDCLEE-EDCR--EEASQATEKKRR----LTVDQVKA 59
DH DK K R + + +C E+ ED + +E Q K+RR T++Q+
Sbjct: 73 DHVDNDKEKLKEFGT-ARVAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNE 131
Query: 60 LEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLL--KANY- 116
LE+ F+ + + + +L++ LGL ++ VWFQNRRA+ + +E + G++ AN+
Sbjct: 132 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTANHL 191
Query: 117 DALRL-DYNNLQQENEALTAELRELKAKLCQENEETSH 153
DA R+ Y N+ AL ++++A+L E +H
Sbjct: 192 DACRVAPYVNMG----ALRMPFQQVQAQLQLEGVAHAH 225
>UNIPROTKB|Q8AWG6 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
[GO:0001889 "liver development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 eggNOG:NOG252905 CTD:3087
HOGENOM:HOG000049110 HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W
HSSP:P22808 EMBL:AY160969 EMBL:CR761571 RefSeq:NP_989420.1
UniGene:Str.111 ProteinModelPortal:Q8AWG6 SMR:Q8AWG6 STRING:Q8AWG6
GeneID:395060 KEGG:xtr:395060 Xenbase:XB-GENE-487159
InParanoid:Q8AWG6 Uniprot:Q8AWG6
Length = 274
Score = 142 (55.0 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 51 RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
R + DQ LEK FE L P + +LA+ L L RQ+ WFQNRRA+ + + E G
Sbjct: 145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQG 204
Query: 111 LLKANYDALRLDYNNLQQENE--ALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNH 168
K ++L N+ +E++ L+AE + ++ L + + ++ VS+ S
Sbjct: 205 NKKDETESLE----NICEESQERCLSAEQKSRESSLDEPTSSPTSQETLDSEVSDDSDQE 260
Query: 169 VSSE 172
V E
Sbjct: 261 VDIE 264
>UNIPROTKB|G3V2N9 [details] [associations]
symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC004534 HGNC:HGNC:22448
ProteinModelPortal:G3V2N9 SMR:G3V2N9 Ensembl:ENST00000555556
ArrayExpress:G3V2N9 Bgee:G3V2N9 Uniprot:G3V2N9
Length = 166
Score = 124 (48.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 40 EEASQATEKKRRL-TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRA 98
E Q +K R L DQ++ LEK F+ D+ + D++ ++A+ +G+ P++I VWFQNRRA
Sbjct: 55 EVTCQIRKKTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRA 114
Query: 99 RLKSKE 104
+ + E
Sbjct: 115 KWRKME 120
>UNIPROTKB|F1SG33 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 OMA:SNHCPVH
EMBL:FP015869 RefSeq:XP_003134961.1 Ensembl:ENSSSCT00000013224
GeneID:100520816 KEGG:ssc:100520816 Uniprot:F1SG33
Length = 300
Score = 141 (54.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/131 (30%), Positives = 70/131 (53%)
Query: 7 DHFHEDKTSTKRKQIYGREFQAMMDCLEE-EDCR--EEASQATEKKRR----LTVDQVKA 59
DH DK K GR + + DC ++ ED + +E Q K+RR T++Q+
Sbjct: 73 DHVDNDKDKLKEFGT-GRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNE 131
Query: 60 LEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLL---KANY 116
LE+ F+ + + + +L++ LGL ++ VWFQNRRA+ + +E + G++ ++
Sbjct: 132 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHL 191
Query: 117 DALRL-DYNNL 126
DA R+ Y N+
Sbjct: 192 DACRVAPYVNM 202
>UNIPROTKB|O13023 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0001570 "vasculogenesis" evidence=IMP]
[GO:0001889 "liver development" evidence=IEP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEP;IMP] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 CTD:3087 HOVERGEN:HBG055460 KO:K08024
HSSP:P22808 EMBL:U94837 EMBL:BC059320 RefSeq:NP_001079059.1
UniGene:Xl.225 ProteinModelPortal:O13023 SMR:O13023 GeneID:373590
KEGG:xla:373590 Xenbase:XB-GENE-865680 Uniprot:O13023
Length = 272
Score = 140 (54.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 51 RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
R + DQ LEK FE L P + +LA+ L L RQ+ WFQNRRA+ + + E G
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQG 202
Query: 111 LLKANYDALRLDYNNLQQENE--ALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNH 168
K ++L N+ +E++ L+AE + ++ L + ++ VS+ S
Sbjct: 203 NKKDETESLE----NICEESQERCLSAEQKSRESSLDDPTSSPTSQGNLDSEVSDDSDQE 258
Query: 169 VSSE 172
V E
Sbjct: 259 VDIE 262
>UNIPROTKB|H0YLI9 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YLI9 SMR:H0YLI9
Ensembl:ENST00000558872 Bgee:H0YLI9 Uniprot:H0YLI9
Length = 225
Score = 137 (53.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 41/131 (31%), Positives = 70/131 (53%)
Query: 7 DHFHEDKTSTKRKQIYGREFQAMMDCLEE-EDCR--EEASQATEKKRR----LTVDQVKA 59
DH DK K R + + +C E+ ED + +E Q K+RR T++Q+
Sbjct: 73 DHVDNDKEKLKEFGT-ARVAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNE 131
Query: 60 LEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLL--KANY- 116
LE+ F+ + + + +L++ LGL ++ VWFQNRRA+ + +E + G++ AN+
Sbjct: 132 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTANHL 191
Query: 117 DALRL-DYNNL 126
DA R+ Y N+
Sbjct: 192 DACRVAPYVNM 202
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 41 EASQATEKKRRL---TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRR 97
+ S+ KK+R T Q++ LE +F+ + ++ +L+ ELGL PRQI WFQNRR
Sbjct: 25 DGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQNRR 84
Query: 98 ARLKSKELERDYGLLKANYDALRLD 122
+LK++ D LKA D +R +
Sbjct: 85 TQLKAQHERADNSALKAENDKIRCE 109
>UNIPROTKB|H0YMR3 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YMR3 SMR:H0YMR3
Ensembl:ENST00000560001 Bgee:H0YMR3 Uniprot:H0YMR3
Length = 279
Score = 137 (53.3 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 41/131 (31%), Positives = 70/131 (53%)
Query: 7 DHFHEDKTSTKRKQIYGREFQAMMDCLEE-EDCR--EEASQATEKKRR----LTVDQVKA 59
DH DK K R + + +C E+ ED + +E Q K+RR T++Q+
Sbjct: 73 DHVDNDKEKLKEFGT-ARVAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNE 131
Query: 60 LEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLL--KANY- 116
LE+ F+ + + + +L++ LGL ++ VWFQNRRA+ + +E + G++ AN+
Sbjct: 132 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTANHL 191
Query: 117 DALRL-DYNNL 126
DA R+ Y N+
Sbjct: 192 DACRVAPYVNM 202
>UNIPROTKB|F1NFE6 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0002063
"chondrocyte development" evidence=IEA] [GO:0003170 "heart valve
development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0032330
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0048743
GO:GO:0045880 GO:GO:2000172 EMBL:AADN02017635 EMBL:AADN02017636
EMBL:AADN02017637 EMBL:AADN02017638 IPI:IPI00577004
Ensembl:ENSGALT00000026949 OMA:ARVQXVQ Uniprot:F1NFE6
Length = 221
Score = 133 (51.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 40/132 (30%), Positives = 70/132 (53%)
Query: 7 DHFHEDKTSTKRKQIYGREFQAMMDCLEE-EDCR--EEASQATEKKRR----LTVDQVKA 59
DH DK K GR + + +C E+ ED + +E Q K+RR T++Q+
Sbjct: 7 DHVESDKDKMKEFAA-GRTAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNE 65
Query: 60 LEKNFEVDNKLEPDRKVKLAEELGLQPRQIA-VWFQNRRARLKSKELERDYGLL---KAN 115
LE+ F+ + + + +L++ LGL ++ VWFQNRRA+ + +E + G++ ++
Sbjct: 66 LERLFDETHYPDAFMREELSQRLGLSEARVQQVWFQNRRAKCRKQENQMHKGVILGTASH 125
Query: 116 YDALRL-DYNNL 126
DA R+ Y N+
Sbjct: 126 LDACRVAPYVNM 137
>UNIPROTKB|E2QXS9 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:AAEX03015414 RefSeq:XP_850204.1
Ensembl:ENSCAFT00000012018 GeneID:608175 KEGG:cfa:608175
NextBio:20893846 Uniprot:E2QXS9
Length = 270
Score = 135 (52.6 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 51 RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
R + DQ LEK FE L P + +LA+ L L RQ+ WFQNRRA+ + + E
Sbjct: 144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 111 LLKANYDALRLDYNNLQQENEALTAELRE--LKAKLCQENEETSHAVEAEAPVSEQSKNH 168
K ++L +N + + L++E + L + C + + +E+E +SE S
Sbjct: 204 NKKEELESL----DNPCDQRQDLSSEQNKGALDSSQCSPSPASQEDLESE--ISEDSDQE 257
Query: 169 VSSE 172
V E
Sbjct: 258 VDIE 261
>UNIPROTKB|F1SC87 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:CU467586 RefSeq:NP_001231508.1
UniGene:Ssc.15862 Ensembl:ENSSSCT00000011460 GeneID:397232
KEGG:ssc:397232 Uniprot:F1SC87
Length = 269
Score = 134 (52.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 51 RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
R + DQ LEK FE L P + +LA+ L L RQ+ WFQNRRA+ + + E
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQN 202
Query: 111 LLKANYDALRLDYNNLQQENEALTAELRE--LKAKLCQENEETSHAVEAEAPVSEQSKNH 168
K ++L D N+ Q + L +E + L + C + + +E+E +SE S
Sbjct: 203 NKKEELESL--D-NSCDQRQD-LPSEQNKGALDSSQCSPSPVSQEDLESE--ISEDSDQE 256
Query: 169 VSSE 172
V E
Sbjct: 257 VDIE 260
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 117 (46.2 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 53 TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK---SKELERDY 109
T +Q++ LE++F L + KLAE LGL Q+ VWFQNRR + K S++ +
Sbjct: 43 TDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQKKIDSRDPIKPE 102
Query: 110 GLLKA-NYDALRLDYNN 125
L A NY + +Y N
Sbjct: 103 TLKPAENYQNVYQNYQN 119
>ZFIN|ZDB-GENE-051030-21 [details] [associations]
symbol:shox "short stature homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-051030-21 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104279 EMBL:BX294669 IPI:IPI00742503
Ensembl:ENSDART00000029238 ArrayExpress:F1Q5T6 Bgee:F1Q5T6
Uniprot:F1Q5T6
Length = 304
Score = 135 (52.6 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 45/159 (28%), Positives = 84/159 (52%)
Query: 7 DHFHEDKTSTKRKQIYGREFQAMMDCLEE-EDCR--EEASQATEKKRR----LTVDQVKA 59
+H +K K + R + DC ++ ED + +E +Q+ K+RR T++Q+
Sbjct: 65 EHVELEKEKLKEFSVT-RASDGIYDCKDKKEDVKSEDEDAQSKLKQRRSRTNFTLEQLNE 123
Query: 60 LEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLL---KANY 116
LE+ F+ + + + +L++ LGL ++ VWFQNRRA+ + +E + G++ ++
Sbjct: 124 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHL 183
Query: 117 DALRL-DYNNLQQENEALTAELRELKAKLCQENEET-SH 153
DA R+ Y N+ AL ++++A+L E T SH
Sbjct: 184 DACRVAPYVNMG----ALRMPFQQVQAQLQLEGVGTHSH 218
>UNIPROTKB|A7YWK1 [details] [associations]
symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0061009 "common bile duct
development" evidence=IEA] [GO:0060431 "primary lung bud formation"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
"B cell differentiation" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
Length = 271
Score = 133 (51.9 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 51 RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
R + DQ LEK FE L P + +LA+ L L RQ+ WFQNRRA+ + + E
Sbjct: 145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQN 204
Query: 111 LLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVS 170
K ++L D + Q+++ L++ C + + +E+E +SE S V
Sbjct: 205 NKKEELESL--DNSCDQRQDLPSDQNTGALESSQCSPSPVSQEDLESE--ISEDSDQEVD 260
Query: 171 SE 172
E
Sbjct: 261 IE 262
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 116 (45.9 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 31 DCLEEEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQI 89
+ + E+ Q + KKR T Q++ LE+ F + + +++++L+ L L RQ+
Sbjct: 22 EAVAEKSNSSAVPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQV 81
Query: 90 AVWFQNRRARLKSKELERD 108
+WFQNRR +K K+L RD
Sbjct: 82 KIWFQNRR--MKEKKLNRD 98
>WB|WBGene00000434 [details] [associations]
symbol:ceh-9 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
NextBio:953494 Uniprot:P56407
Length = 147
Score = 116 (45.9 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 22 YGREFQAMMDCLEEEDCREEASQATEKKRRLTVD--QVKALEKNFEVDNKLEPDRKVKLA 79
+GR ++ +D +E E+ + KK R T QV LEK FE L + +LA
Sbjct: 47 FGR-CKSSLDQAKESPI-EKCQKTKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELA 104
Query: 80 EELGLQPRQIAVWFQNRRARLKSKELERD 108
+ L + Q+ +WFQNRR + K E E++
Sbjct: 105 KRLDVTETQVKIWFQNRRTKWKKIESEKE 133
>UNIPROTKB|F1P169 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 EMBL:AADN02010005
EMBL:AADN02010006 IPI:IPI00822985 Ensembl:ENSGALT00000015650
ArrayExpress:F1P169 Uniprot:F1P169
Length = 156
Score = 114 (45.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 37 DCREEASQATEKKRRLTVDQVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQN 95
+ +A + ++ + DQ KALEK F+ + + DRK KLA LGL+ Q+ +WFQN
Sbjct: 1 ESNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRK-KLAINLGLKESQVKIWFQN 59
Query: 96 RRARLK-SKELE 106
RR + + SKE E
Sbjct: 60 RRMKWRNSKEKE 71
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 114 (45.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 14 TSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPD 73
T+ + ++ R + D E E +S+A +++ T +Q++ LE F N L
Sbjct: 25 TANETEKKSSRRRKESSDNQENRGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRL 84
Query: 74 RKVKLAEELGLQPRQIAVWFQNRRARLK 101
R+ ++A L L RQ+ VWFQNRR + K
Sbjct: 85 RRYEIAVNLDLSERQVKVWFQNRRMKWK 112
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 114 (45.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 43 SQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+++T KKR T Q LEK F + L DR+ ++A L L RQ+ +WFQNRR +K
Sbjct: 43 ARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRR--MK 100
Query: 102 SKELERD 108
K++ +D
Sbjct: 101 MKKINKD 107
>UNIPROTKB|G3X7M1 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 CTD:6473
OMA:SNHCPVH EMBL:DAAA02005893 RefSeq:NP_001178475.1
UniGene:Bt.106108 Ensembl:ENSBTAT00000038279 GeneID:615159
KEGG:bta:615159 NextBio:20899478 Uniprot:G3X7M1
Length = 306
Score = 132 (51.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/129 (28%), Positives = 67/129 (51%)
Query: 10 HEDKTSTKRKQI-YGREFQAMMDCLEEED---CREEASQATEKKRR----LTVDQVKALE 61
H D K K+ GR + + DC ++ D +E Q K+RR T++Q+ LE
Sbjct: 76 HVDTEKDKLKEFGSGRAAEGIYDCKDKRDDVKSEDEDGQTKLKQRRSRTNFTLEQLNELE 135
Query: 62 KNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLL---KANYDA 118
+ F+ + + + +L++ LGL ++ VWFQNRRA+ + +E + ++ ++ DA
Sbjct: 136 RLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHNSVILGTASHLDA 195
Query: 119 LRL-DYNNL 126
R+ Y N+
Sbjct: 196 CRVAPYVNM 204
>UNIPROTKB|F1NXJ0 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 IPI:IPI00822533
EMBL:AADN02010005 EMBL:AADN02010006 Ensembl:ENSGALT00000038779
ArrayExpress:F1NXJ0 Uniprot:F1NXJ0
Length = 160
Score = 116 (45.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 36 EDCREEASQATEKKRRLTVDQVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQ 94
++ +A + ++ + DQ KALEK F+ + + DRK KLA LGL+ Q+ +WFQ
Sbjct: 3 QESNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRK-KLAINLGLKESQVKIWFQ 61
Query: 95 NRRARLK-SKELE 106
NRR + + SKE E
Sbjct: 62 NRRMKWRNSKEKE 74
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 41/119 (34%), Positives = 64/119 (53%)
Query: 10 HEDKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRRL---TVDQVKALEKNF-E 65
HE+ TK G E M + LEEE ++ +Q KK+R T Q++ LE F E
Sbjct: 31 HEEDFETKS----GAEV-TMENPLEEE--LQDPNQRPNKKKRYHRHTQRQIQELESFFKE 83
Query: 66 VDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYN 124
+ + RK +L+ EL L+P Q+ WFQN+R ++K++ + +LK+ D LR + N
Sbjct: 84 CPHPDDKQRK-ELSRELSLEPLQVKFWFQNKRTQMKAQHERHENQILKSENDKLRAENN 141
>ZFIN|ZDB-GENE-010108-1 [details] [associations]
symbol:vox "ventral homeobox" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI] [GO:0042661
"regulation of mesodermal cell fate specification" evidence=IGI]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-010108-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009953
GO:GO:0000976 GO:GO:0042661 EMBL:BC092695 IPI:IPI00629975
UniGene:Dr.82511 STRING:Q568V6 HOGENOM:HOG000170671
HOVERGEN:HBG098403 InParanoid:Q568V6 ArrayExpress:Q568V6
Uniprot:Q568V6
Length = 265
Score = 130 (50.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 28 AMMDCLEEEDCRE-EASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQ 85
A +C ED + E AT + R + T +Q+ LEK F L+ +VK A +LGL
Sbjct: 121 AASECASVEDGHDAEKDGATRRIRTKFTPEQIDKLEKIFNKHKYLDAGERVKTALKLGLS 180
Query: 86 PRQIAVWFQNRRARLKSK--ELERDY 109
QI WFQNRR +LK + E+ D+
Sbjct: 181 ETQIRTWFQNRRMKLKREVQEMRADF 206
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 113 (44.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 42 ASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
A +K+ T Q LEK F + L +R++++++ + L RQ+ +WFQNRR +LK
Sbjct: 18 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLK 77
Query: 102 SKELERDYGLLKANYD 117
E L +N++
Sbjct: 78 KMNRENRIRELTSNFN 93
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 113 (44.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 42 ASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
A +K+ T Q LEK F + L +R++++++ + L RQ+ +WFQNRR +LK
Sbjct: 22 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLK 81
Query: 102 SKELERDYGLLKANYD 117
E L +N++
Sbjct: 82 KMNRENRIRELTSNFN 97
>UNIPROTKB|F8VWZ5 [details] [associations]
symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IEA] [GO:0045629 "negative regulation of
T-helper 2 cell differentiation" evidence=IEA] [GO:0046622
"positive regulation of organ growth" evidence=IEA] [GO:0048484
"enteric nervous system development" evidence=IEA] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
GO:GO:0000976 GO:GO:0048484 GO:GO:0045629 GO:GO:0007519
GO:GO:0045627 GO:GO:0048557 EMBL:AL445423 HGNC:HGNC:4978
IPI:IPI00643042 ProteinModelPortal:F8VWZ5 SMR:F8VWZ5
Ensembl:ENST00000427693 ArrayExpress:F8VWZ5 Bgee:F8VWZ5
Uniprot:F8VWZ5
Length = 151
Score = 113 (44.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 56 QVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQNRRARLK-SKELE 106
Q K LEK FE+ + +PDRK +LA LGL Q+ VWFQNRR + + SKE +
Sbjct: 20 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQ 71
>UNIPROTKB|D2H028 [details] [associations]
symbol:PANDA_002743 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0000988 "protein binding transcription factor activity"
evidence=ISS] [GO:0001047 "core promoter binding" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0004882 "androgen
receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0007431 "salivary gland development" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0010942 "positive regulation of cell death"
evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISS] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=ISS] [GO:0051781 "positive
regulation of cell division" evidence=ISS] [GO:0060442 "branching
involved in prostate gland morphogenesis" evidence=ISS] [GO:0060664
"epithelial cell proliferation involved in salivary gland
morphogenesis" evidence=ISS] [GO:0060770 "negative regulation of
epithelial cell proliferation involved in prostate gland
development" evidence=ISS] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=ISS] [GO:0071899 "negative
regulation of estrogen receptor binding" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0014068 GO:GO:0030295
GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942 GO:GO:0033574
GO:GO:0001047 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0030331 GO:GO:0060770 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:2001022 GO:GO:0060442 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 GO:GO:0071899
GO:GO:2000836 EMBL:GL192401 Uniprot:D2H028
Length = 140
Score = 113 (44.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/111 (29%), Positives = 49/111 (44%)
Query: 24 REFQA-MMDCLEEEDCRE---EASQATEKKRRLTVD--QVKALEKNFEVDNKLEPDRKVK 77
R F+ ++DC + S+ +K+ R QV LE+ F L +
Sbjct: 3 RHFETYLLDCENSAGSLPSLPQTSKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAH 62
Query: 78 LAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQ 128
LA+ L L Q+ +WFQNRR + K K+L D G L+ + L L Q
Sbjct: 63 LAKNLKLTETQVKIWFQNRRYKTKRKQLTSDLGDLEKHSSLPALKEEGLSQ 113
>UNIPROTKB|F1PRX2 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0010942 "positive
regulation of cell death" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=ISS] [GO:2000836 "positive regulation of
androgen secretion" evidence=ISS] [GO:2001022 "positive regulation
of response to DNA damage stimulus" evidence=ISS] [GO:0030521
"androgen receptor signaling pathway" evidence=ISS] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0030331 "estrogen receptor binding" evidence=ISS]
[GO:0030284 "estrogen receptor activity" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:0051781 "positive regulation of cell
division" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
"negative regulation of cell proliferation" evidence=ISS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
gland development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0060664 "epithelial cell proliferation involved in salivary
gland morphogenesis" evidence=ISS] [GO:0060442 "branching involved
in prostate gland morphogenesis" evidence=ISS] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=ISS] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0030295 "protein kinase activator activity" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0097162 "MADS box domain binding" evidence=IEA]
[GO:0071850 "mitotic cell cycle arrest" evidence=IEA] [GO:0071456
"cellular response to hypoxia" evidence=IEA] [GO:0071356 "cellular
response to tumor necrosis factor" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0060037
"pharyngeal system development" evidence=IEA] [GO:0045930 "negative
regulation of mitotic cell cycle" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0035907 "dorsal
aorta development" evidence=IEA] [GO:0035690 "cellular response to
drug" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584
GO:GO:0001756 GO:GO:0006919 GO:GO:0035690 GO:GO:0010942
GO:GO:0060037 GO:GO:0033574 GO:GO:0001047 GO:GO:0008656
GO:GO:0043491 GO:GO:0000976 GO:GO:0004882 GO:GO:0071347
GO:GO:0071356 GO:GO:0030331 GO:GO:0000983 GO:GO:0060770
GO:GO:0001656 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:0035907 GO:GO:2000836
EMBL:AAEX03014362 Ensembl:ENSCAFT00000014483 OMA:YCLGGWN
Uniprot:F1PRX2
Length = 140
Score = 112 (44.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 33/111 (29%), Positives = 49/111 (44%)
Query: 24 REFQA-MMDCLEEEDCRE---EASQATEKKRRLTVD--QVKALEKNFEVDNKLEPDRKVK 77
R F+ ++DC + S+ +K+ R QV LE+ F L +
Sbjct: 3 RHFETYLLDCENSAGSLPSLPQTSKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAH 62
Query: 78 LAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQ 128
LA+ L L Q+ +WFQNRR + K K+L D G L+ + L L Q
Sbjct: 63 LAKNLKLTETQVKIWFQNRRYKTKRKQLTSDLGDLEKHSSLPALKEEGLPQ 113
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 112 (44.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 42 ASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
A +K+ T Q LEK F + L +R+++++ + L RQ+ +WFQNRR +LK
Sbjct: 16 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLK 75
Query: 102 SKELERDYGLLKANYD 117
E L AN++
Sbjct: 76 KMNRENRIRELTANFN 91
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 112 (44.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 42 ASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
A +K+ T Q LEK F + L +R+++++ + L RQ+ +WFQNRR +LK
Sbjct: 17 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLK 76
Query: 102 SKELERDYGLLKANYD 117
E L AN++
Sbjct: 77 KMNRENRIRELTANFN 92
>UNIPROTKB|Q03014 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IDA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IDA] [GO:0008283
"cell proliferation" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0030154 "cell differentiation" evidence=IC]
[GO:0030183 "B cell differentiation" evidence=ISS] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0070491
"repressing transcription factor binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA;TAS]
[GO:0010944 "negative regulation of transcription by competitive
promoter binding" evidence=TAS] [GO:0017025 "TBP-class protein
binding" evidence=TAS] [GO:0034504 "protein localization to
nucleus" evidence=IDA] [GO:0010621 "negative regulation of
transcription by transcription factor localization" evidence=IC]
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0071103 "DNA conformation
change" evidence=IDA] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISS] [GO:0030948 "negative regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009611
GO:GO:0016055 GO:GO:0009952 GO:GO:0008283 EMBL:CH471066
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0008301 GO:GO:0044212 GO:GO:0007049
GO:GO:0030183 GO:GO:0035264 GO:GO:0001570 GO:GO:0016525
GO:GO:0031016 GO:GO:0007492 GO:GO:0070365 GO:GO:0010944
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0017025 GO:GO:0070491
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0008190
GO:GO:0016973 GO:GO:0030878 EMBL:AL590080 GO:GO:0048853
GO:GO:0010621 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W EMBL:X67235
EMBL:L16499 EMBL:AK314891 EMBL:BC014336 EMBL:BC015110 EMBL:BC050638
EMBL:Z21533 IPI:IPI00008771 PIR:JN0767 RefSeq:NP_002720.1
UniGene:Hs.118651 PDB:2E1O PDBsum:2E1O ProteinModelPortal:Q03014
SMR:Q03014 IntAct:Q03014 MINT:MINT-1439118 STRING:Q03014
PhosphoSite:Q03014 DMDM:547658 PRIDE:Q03014 DNASU:3087
Ensembl:ENST00000282728 GeneID:3087 KEGG:hsa:3087 UCSC:uc001kid.3
GeneCards:GC10P094439 HGNC:HGNC:4901 MIM:604420 neXtProt:NX_Q03014
PharmGKB:PA29274 InParanoid:Q03014 OMA:DNSCDQR PhylomeDB:Q03014
EvolutionaryTrace:Q03014 GenomeRNAi:3087 NextBio:12253
ArrayExpress:Q03014 Bgee:Q03014 CleanEx:HS_HHEX
Genevestigator:Q03014 GermOnline:ENSG00000152804 GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 Uniprot:Q03014
Length = 270
Score = 129 (50.5 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 51 RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
R + DQ LEK FE L P + +LA+ L L RQ+ WFQNRRA+ + + E
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 202
Query: 111 LLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVS 170
K ++L + +Q+ + + L + C + + +E+E +SE S V
Sbjct: 203 NKKEELESLDSSCDQ-RQDLPSEQNKGASLDSSQCSPSPASQEDLESE--ISEDSDQEVD 259
Query: 171 SE 172
E
Sbjct: 260 IE 261
>UNIPROTKB|Q91975 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG270330 HOGENOM:HOG000112172
HOVERGEN:HBG104467 OrthoDB:EOG4MPHQG EMBL:X59548 EMBL:X59549
IPI:IPI00822533 PIR:A56566 UniGene:Gga.12249
ProteinModelPortal:Q91975 SMR:Q91975 ArrayExpress:Q91975
Uniprot:Q91975
Length = 157
Score = 114 (45.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 37 DCREEASQATEKKRRLTVDQVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQN 95
+ +A + ++ + DQ KALEK F+ + + DRK KLA LGL+ Q+ +WFQN
Sbjct: 1 ESNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRK-KLAINLGLKESQVKIWFQN 59
Query: 96 RRARLK-SKELE 106
RR + + SKE E
Sbjct: 60 RRMKWRNSKEKE 71
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 111 (44.1 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 42 ASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
A +K+ T Q LEK F + L +R++++++ + L RQ+ +WFQNRR +LK
Sbjct: 18 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLK 77
Query: 102 SKELERDYGLLKAN 115
E L AN
Sbjct: 78 KMSRENRIRELTAN 91
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 110 (43.8 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 47 EKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+K+ R T +Q++ L+ F+ + + R+ LA+EL L QI +WFQN+RA++K
Sbjct: 3 DKRPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIK 59
>UNIPROTKB|F6VMK5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 GO:GO:0071899 GO:GO:0035907
GO:GO:2000836 OMA:YCLGGWN Ensembl:ENSECAT00000001320 Uniprot:F6VMK5
Length = 142
Score = 110 (43.8 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 41 EASQATEKKRRLTVD--QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRA 98
+ S+ +K+ R QV LE+ F L + LA+ L L Q+ +WFQNRR
Sbjct: 26 QPSKQPQKRSRAAFSHTQVIELERKFSRQKYLSAPERAHLAKNLKLTETQVKIWFQNRRY 85
Query: 99 RLKSKELERDYGLLK 113
+ K K+L D G L+
Sbjct: 86 KTKRKQLSSDLGNLE 100
>RGD|1305369 [details] [associations]
symbol:Nkx3-1 "NK3 homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISO;ISS] [GO:0000983 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO;ISS] [GO:0001047 "core
promoter binding" evidence=ISO;ISS] [GO:0001656 "metanephros
development" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0004882
"androgen receptor activity" evidence=ISO;ISS] [GO:0005622
"intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;ISS] [GO:0007431 "salivary gland development"
evidence=ISO;ISS] [GO:0007507 "heart development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO;ISS] [GO:0008584 "male gonad
development" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=ISO;ISS] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0010942 "positive regulation of cell
death" evidence=ISO;ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO;ISS]
[GO:0030284 "estrogen receptor activity" evidence=ISO;ISS]
[GO:0030295 "protein kinase activator activity" evidence=ISO;ISS]
[GO:0030331 "estrogen receptor binding" evidence=ISO;ISS]
[GO:0030521 "androgen receptor signaling pathway" evidence=ISO;ISS]
[GO:0033574 "response to testosterone stimulus" evidence=ISO;ISS]
[GO:0035690 "cellular response to drug" evidence=IEA;ISO]
[GO:0035907 "dorsal aorta development" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA;ISO] [GO:0043280
"positive regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO;ISS] [GO:0043491
"protein kinase B signaling cascade" evidence=ISO;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0043569 "negative
regulation of insulin-like growth factor receptor signaling
pathway" evidence=ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISO;ISS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IEA;ISO] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISO;ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO;ISS] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=ISO;ISS] [GO:0051781
"positive regulation of cell division" evidence=ISO;ISS]
[GO:0060037 "pharyngeal system development" evidence=IEA]
[GO:0060442 "branching involved in prostate gland morphogenesis"
evidence=ISO;ISS] [GO:0060664 "epithelial cell proliferation
involved in salivary gland morphogenesis" evidence=ISO;ISS]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=ISO;ISS]
[GO:0071347 "cellular response to interleukin-1" evidence=IEA;ISO]
[GO:0071356 "cellular response to tumor necrosis factor"
evidence=IEA;ISO] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=ISO;ISS] [GO:0071456 "cellular response to
hypoxia" evidence=IEA;ISO] [GO:0071850 "mitotic cell cycle arrest"
evidence=IEA;ISO] [GO:0071899 "negative regulation of estrogen
receptor binding" evidence=ISO;ISS] [GO:0097162 "MADS box domain
binding" evidence=IEA;ISO] [GO:2000836 "positive regulation of
androgen secretion" evidence=ISO;ISS] [GO:2001022 "positive
regulation of response to DNA damage stimulus" evidence=ISO;ISS]
[GO:2001235 "positive regulation of apoptotic signaling pathway"
evidence=ISO] [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=ISO;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1305369 GO:GO:0005634
GO:GO:0045892 GO:GO:0007507 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0071456 GO:GO:0014068
GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584 GO:GO:0001756
GO:GO:0006919 GO:GO:0035690 GO:GO:0010942 GO:GO:0060037
GO:GO:0033574 GO:GO:0001047 GO:GO:0008656 GO:GO:0043491
GO:GO:0000976 GO:GO:0004882 GO:GO:0071347 GO:GO:0071356
GO:GO:0030331 GO:GO:0000983 GO:GO:0060770 GO:GO:0001656
GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 EMBL:CH473951 HOGENOM:HOG000231923 HOVERGEN:HBG006689
KO:K09348 GO:GO:0071899 CTD:4824 eggNOG:NOG238786 OMA:TEPERHL
OrthoDB:EOG46Q6TS GO:GO:0035907 GO:GO:2000836 EMBL:BC100628
IPI:IPI00373298 RefSeq:NP_001029316.1 UniGene:Rn.43468 SMR:Q497B7
STRING:Q497B7 Ensembl:ENSRNOT00000020753 GeneID:305999
KEGG:rno:305999 UCSC:RGD:1305369 InParanoid:Q497B7 NextBio:655374
Genevestigator:Q497B7 Uniprot:Q497B7
Length = 238
Score = 126 (49.4 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 34/108 (31%), Positives = 51/108 (47%)
Query: 14 TSTKRKQIYGREFQA-MMDCLEEEDCREEASQAT---EKKRRLTVD--QVKALEKNFEVD 67
T T+ + F+ ++DC E A Q T +K+ R QV LE+ F
Sbjct: 90 TETRAETESDAHFETYLLDC-EHTPVLSSAPQVTKQPQKRSRAAFSHTQVIELERKFSHQ 148
Query: 68 NKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKAN 115
L + LA+ L L Q+ +WFQNRR + K ++L D G+L+ N
Sbjct: 149 KYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRRQLSEDLGVLEKN 196
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 117 (46.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 43 SQATEKKR----RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRA 98
S++ +K++ R T +Q ALE F+ L P + KLA+ L L RQ+ WFQNRRA
Sbjct: 70 SKSPQKRKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRA 129
Query: 99 R 99
+
Sbjct: 130 K 130
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 36/94 (38%), Positives = 50/94 (53%)
Query: 34 EEEDCREEASQATEKKR--RLTVDQVKALEKNFEVDNKLE-PDRKVK--LAEELGLQPRQ 88
+ D E + +KKR R T Q++ LE F N+ + PD K + L+ ELGL PRQ
Sbjct: 8 QNHDSSETEKKNKKKKRFHRHTPHQIQRLESTF---NECQHPDEKQRNQLSRELGLAPRQ 64
Query: 89 IAVWFQNRRARLKSKELERDYGLLKANYDALRLD 122
I WFQNRR + K++ D LK D +R +
Sbjct: 65 IKFWFQNRRTQKKAQHERADNCALKEENDKIRCE 98
>WB|WBGene00000439 [details] [associations]
symbol:ceh-16 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0009957 "epidermal cell fate specification" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0045026 "plasma membrane fusion" evidence=IGI;IMP] [GO:0048859
"formation of anatomical boundary" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0043565 GO:GO:0045944 GO:GO:0040011 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0040015 GO:GO:0000976 GO:GO:0010172
GO:GO:0009957 GO:GO:0048859 GeneTree:ENSGT00680000099870
EMBL:AY647457 EMBL:FO080380 PIR:S44752 PIR:T15488
RefSeq:NP_498898.2 UniGene:Cel.25260 ProteinModelPortal:P34326
SMR:P34326 STRING:P34326 EnsemblMetazoa:C13G5.1.1
EnsemblMetazoa:C13G5.1.2 GeneID:191618 KEGG:cel:CELE_C13G5.1
UCSC:C13G5.1 CTD:191618 WormBase:C13G5.1 eggNOG:NOG306728
HOGENOM:HOG000022417 InParanoid:P34326 OMA:PTFASPN NextBio:949698
GO:GO:0045026 PROSITE:PS00033 Uniprot:P34326
Length = 187
Score = 121 (47.7 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 30/79 (37%), Positives = 41/79 (51%)
Query: 34 EEEDCREEASQATEKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAV 91
+ E S EK+ R T DQ+ L+ F L R+ +LA ELGL QI +
Sbjct: 74 KRESTGSSGSSEEEKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKI 133
Query: 92 WFQNRRARLK--SKELERD 108
WFQN+RA+LK + + RD
Sbjct: 134 WFQNKRAKLKKSTSSVPRD 152
>UNIPROTKB|P79775 [details] [associations]
symbol:P79775 "Homeobox protein ANF-1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:U65436 IPI:IPI00575485
RefSeq:NP_990343.1 UniGene:Gga.32344 ProteinModelPortal:P79775
STRING:P79775 GeneID:395864 KEGG:gga:395864 CTD:8820
eggNOG:NOG326168 HOGENOM:HOG000112889 HOVERGEN:HBG004226 KO:K09354
NextBio:20815931 Uniprot:P79775
Length = 196
Score = 122 (48.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 31/116 (26%), Positives = 60/116 (51%)
Query: 9 FHEDKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRR--LTVDQVKALEKNFEV 66
FH + + +++ E + E + E S ++ R T +Q++ LE F++
Sbjct: 81 FHANSNLMQEEKVLNCEKYFSVTVTERLSFKRELSWYRGRRPRTAFTRNQIEVLENVFKM 140
Query: 67 DNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLD 122
++ D + +LA +L L+ +I +WFQNRRA+LK E + ++K N+ + L+
Sbjct: 141 NSYPGIDIREELARKLDLEEDRIQIWFQNRRAKLKRSHRESQFLMVKNNFTSSLLE 196
>ZFIN|ZDB-GENE-001206-2 [details] [associations]
symbol:lbx2 "ladybird homeobox homolog 2
(Drosophila)" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0055001
"muscle cell development" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-001206-2 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0055001
HSSP:P13297 HOVERGEN:HBG006244 EMBL:AJ295165 IPI:IPI00511662
UniGene:Dr.27181 ProteinModelPortal:Q9DD91 InParanoid:Q9DD91
Uniprot:Q9DD91
Length = 257
Score = 126 (49.4 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 QATEKKRR----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR 99
QA++K+R+ T Q+ LEK F L P + ++A++LGL Q+ WFQNRRA+
Sbjct: 121 QASKKRRKSRTAFTNHQIYELEKRFWYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 180
Query: 100 LKSKELERDYGLLKANYDALR 120
LK ++LE +KA+ ++L+
Sbjct: 181 LK-RDLEE----MKADVESLK 196
>ZFIN|ZDB-GENE-031016-2 [details] [associations]
symbol:hopx "HOP homeobox" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007507 "heart development" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-031016-2 GO:GO:0005634 GO:GO:0007507
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 CTD:84525 GeneTree:ENSGT00390000017143
HOGENOM:HOG000112932 HOVERGEN:HBG051921 EMBL:AF536198 EMBL:BC096856
EMBL:BC153537 IPI:IPI00498482 RefSeq:NP_937852.1 UniGene:Dr.117691
UniGene:Dr.151001 ProteinModelPortal:Q8AYB8 SMR:Q8AYB8 PRIDE:Q8AYB8
Ensembl:ENSDART00000125203 GeneID:386589 KEGG:dre:386589
NextBio:20813951 Bgee:Q8AYB8 Uniprot:Q8AYB8
Length = 77
Score = 109 (43.4 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 29/66 (43%), Positives = 38/66 (57%)
Query: 51 RLTVDQVKALEKNFEVDNKLEPDRK--VKLAEELGLQPRQIAVWFQNRRARLKSKE-LER 107
RLT DQVK LE+NF +K PD + +A E GL Q AVWF+ R A+ + E L
Sbjct: 12 RLTEDQVKVLEENFTKVSK-HPDETTLMLIAAECGLSEEQTAVWFRMRNAQWRKAEGLPA 70
Query: 108 DYGLLK 113
+ G +K
Sbjct: 71 ELGSVK 76
>UNIPROTKB|Q0P4H6 [details] [associations]
symbol:lbx1 "Transcription factor LBX1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
evidence=ISS] [GO:0051450 "myoblast proliferation" evidence=ISS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 GO:GO:0051450 CTD:10660
HOVERGEN:HBG006244 KO:K09353 EMBL:BC122077 RefSeq:NP_001072559.1
UniGene:Str.53738 ProteinModelPortal:Q0P4H6 GeneID:780014
KEGG:xtr:780014 Xenbase:XB-GENE-6455157 Uniprot:Q0P4H6
Length = 265
Score = 126 (49.4 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 41/139 (29%), Positives = 69/139 (49%)
Query: 46 TEKKRR-----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
T KKRR T Q+ LEK F L P + ++A++LGL Q+ WFQNRRA+L
Sbjct: 121 TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL 180
Query: 101 KS--KELERDYGLLK----ANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHA 154
K +E++ D +K + +A+ L + L++E ++ + R +L
Sbjct: 181 KRDLEEMKADVESVKKMSPSTVEAV-LTISELEEETNSVRDDSRSRSPQLGLSGHMP--- 236
Query: 155 VEAEAPVSEQSKNHVSSEN 173
+ +P++EQ + SE+
Sbjct: 237 LSPSSPLTEQHTSKECSED 255
>UNIPROTKB|P53412 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0000988 eggNOG:NOG275246
GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 EMBL:L35570 IPI:IPI00651346 PIR:I50376
RefSeq:NP_001025506.1 UniGene:Gga.91 ProteinModelPortal:P53412
SMR:P53412 STRING:P53412 Ensembl:ENSGALT00000002663 GeneID:373940
KEGG:gga:373940 CTD:8022 InParanoid:P53412 OMA:PLCAGCN
NextBio:20813472 ArrayExpress:P53412 Uniprot:P53412
Length = 395
Score = 129 (50.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 40/103 (38%), Positives = 56/103 (54%)
Query: 17 KRKQIYGREFQAMMD----CLEE-EDCREEASQATEKKRRLTVDQVKALE--KNFEVDNK 69
KR+ G EF M D C + E ++ +++T K+ R T+ K LE KN +N
Sbjct: 119 KRQLATGDEFYLMEDSRLVCKADYETAKQREAESTAKRPRTTIT-AKQLETLKN-AYNNS 176
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
+P R V+ L+ E GL R + VWFQNRRA K K L++D G
Sbjct: 177 PKPARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAG 217
>UNIPROTKB|P36200 [details] [associations]
symbol:lhx3 "LIM/homeobox protein Lhx3" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 KO:K09374 HOVERGEN:HBG006263
CTD:8022 EMBL:Z22702 EMBL:Z11589 PIR:S38821 RefSeq:NP_001081623.1
UniGene:Xl.32 ProteinModelPortal:P36200 SMR:P36200 GeneID:397959
KEGG:xla:397959 Xenbase:XB-GENE-865930 Uniprot:P36200
Length = 395
Score = 129 (50.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 40/103 (38%), Positives = 56/103 (54%)
Query: 17 KRKQIYGREFQAMMD----CLEE-EDCREEASQATEKKRRLTVDQVKALE--KNFEVDNK 69
KR+ G EF M D C + E ++ +++T K+ R T+ K LE KN +N
Sbjct: 119 KRQLATGDEFYLMEDSRLVCKADYETAKQREAESTAKRPRTTIT-AKQLETLKN-AYNNS 176
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
+P R V+ L+ E GL R + VWFQNRRA K K L++D G
Sbjct: 177 PKPARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAG 217
>RGD|619932 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=IEA;ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0002009 "morphogenesis of an
epithelium" evidence=ISO] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=IEA;ISO] [GO:0007492
"endoderm development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA;ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
[GO:0030097 "hemopoiesis" evidence=ISO;TAS] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0030183 "B
cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development"
evidence=IEA;ISO] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048568 "embryonic organ
development" evidence=IEA;ISO] [GO:0048729 "tissue morphogenesis"
evidence=ISO] [GO:0048853 "forebrain morphogenesis"
evidence=IEA;ISO] [GO:0060431 "primary lung bud formation"
evidence=IEA;ISO] [GO:0061009 "common bile duct development"
evidence=IEA;ISO] [GO:0061010 "gall bladder development"
evidence=IEA;ISO] [GO:0061011 "hepatic duct development"
evidence=IEA;ISO] [GO:0061017 "hepatoblast differentiation"
evidence=IEA;ISO] [GO:0070365 "hepatocyte differentiation"
evidence=IEA;ISO] [GO:0070491 "repressing transcription factor
binding" evidence=IEA;ISO] [GO:0071103 "DNA conformation change"
evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] [GO:0090009 "primitive streak formation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:619932 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0030154 GO:GO:0009611 GO:GO:0043565 GO:GO:0001701
GO:GO:0043434 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
GO:GO:0007049 GO:GO:0030183 GO:GO:0035264 GO:GO:0030097
GO:GO:0001570 GO:GO:0016525 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504
GO:GO:0032993 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0016973 GO:GO:0030878
EMBL:CH473953 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W HSSP:P22808 OMA:DNSCDQR GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 EMBL:BC088135 EMBL:D86383 IPI:IPI00211318
RefSeq:NP_077361.1 UniGene:Rn.12188 SMR:Q9WV22 STRING:Q9WV22
Ensembl:ENSRNOT00000022384 GeneID:79237 KEGG:rno:79237
UCSC:RGD:619932 InParanoid:Q9WV22 NextBio:614664
Genevestigator:Q9WV22 Uniprot:Q9WV22
Length = 271
Score = 126 (49.4 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 37/122 (30%), Positives = 55/122 (45%)
Query: 51 RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
R + DQ LEK FE L P + +LA+ L L RQ+ WFQNRRA+ + + E
Sbjct: 144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 111 LLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVS 170
K D+L + Q+ + + L + C + + E+E +SE S V
Sbjct: 204 NKKDELDSLDTSCDQ-GQDLPSEQNKGASLDSSQCSPSPASPEDPESE--ISEDSDQEVD 260
Query: 171 SE 172
E
Sbjct: 261 IE 262
>ZFIN|ZDB-GENE-990415-117 [details] [associations]
symbol:hoxd11a "homeo box D11a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-117 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231898
HOVERGEN:HBG052048 KO:K09296 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X GeneTree:ENSGT00700000104263 eggNOG:NOG305087
EMBL:BC114271 EMBL:X87751 EMBL:DQ069272 EMBL:Y14543 IPI:IPI00934960
RefSeq:NP_571242.1 UniGene:Dr.47548 ProteinModelPortal:Q90470
SMR:Q90470 Ensembl:ENSDART00000082344 GeneID:30405 KEGG:dre:30405
CTD:30405 NextBio:20806815 ArrayExpress:Q90470 Bgee:Q90470
Uniprot:Q90470
Length = 276
Score = 126 (49.4 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 26/84 (30%), Positives = 51/84 (60%)
Query: 25 EFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGL 84
E ++ C EE++ A+++ +K+ + Q++ LE+ F + + +++++L+ L L
Sbjct: 184 EESSVSTCDEEKNSGSSATKSRKKRCPYSKYQIRELEREFFFNVYINKEKRLQLSRMLSL 243
Query: 85 QPRQIAVWFQNRRARLKSKELERD 108
RQ+ +WFQNRR +K K+L RD
Sbjct: 244 TDRQVKIWFQNRR--MKEKKLNRD 265
>UNIPROTKB|E1C1I8 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 EMBL:AADN02000990 EMBL:AADN02000991
EMBL:AADN02000992 EMBL:AADN02000993 IPI:IPI00818363
Ensembl:ENSGALT00000037817 ArrayExpress:E1C1I8 Uniprot:E1C1I8
Length = 203
Score = 122 (48.0 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 35 EEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
EE + Q T KKR T Q++ LE+ F + +++++L+ L L RQ+ +WF
Sbjct: 120 EEKSGSSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 179
Query: 94 QNRRARLKSKELERD 108
QNRR +K K++ RD
Sbjct: 180 QNRR--MKEKKINRD 192
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 108 (43.1 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 46 TEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
T KKR T Q LEK F + L DR+ ++A L L RQ+ +WFQNRR ++K
Sbjct: 1 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|P13544 [details] [associations]
symbol:HOXD1 "Homeobox protein Hox-D1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314488 EMBL:M23611 IPI:IPI01017276
PIR:JU0068 ProteinModelPortal:P13544 SMR:P13544 InParanoid:P13544
Uniprot:P13544
Length = 67
Score = 108 (43.1 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELER 107
Q+ LEK F L R++++A L L+ Q+ VWFQNRR + K +E ER
Sbjct: 12 QLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERER 63
>MGI|MGI:97352 [details] [associations]
symbol:Nkx3-1 "NK-3 transcription factor, locus 1
(Drosophila)" species:10090 "Mus musculus" [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISO] [GO:0000983 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0000988 "protein binding transcription factor
activity" evidence=ISO] [GO:0001047 "core promoter binding"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=TAS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0004882
"androgen receptor activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007431 "salivary gland development" evidence=IMP] [GO:0008134
"transcription factor binding" evidence=ISO;IDA;IPI] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO;IGI] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0010942 "positive regulation of cell
death" evidence=ISO] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO] [GO:0030284
"estrogen receptor activity" evidence=ISO] [GO:0030295 "protein
kinase activator activity" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0030850 "prostate gland
development" evidence=TAS] [GO:0033574 "response to testosterone
stimulus" evidence=IMP] [GO:0035260 "internal genitalia
morphogenesis" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0043569 "negative regulation of insulin-like
growth factor receptor signaling pathway" evidence=IDA] [GO:0043621
"protein self-association" evidence=ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO] [GO:0045860 "positive
regulation of protein kinase activity" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IMP]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=ISO] [GO:0060442 "branching involved in prostate gland
morphogenesis" evidence=IMP] [GO:0060664 "epithelial cell
proliferation involved in salivary gland morphogenesis"
evidence=IMP] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=IMP]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISO] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071850 "mitotic cell cycle arrest" evidence=ISO]
[GO:0071899 "negative regulation of estrogen receptor binding"
evidence=ISO] [GO:0097162 "MADS box domain binding" evidence=IDA]
[GO:2000836 "positive regulation of androgen secretion"
evidence=ISO] [GO:2001022 "positive regulation of response to DNA
damage stimulus" evidence=ISO] [GO:2001235 "positive regulation of
apoptotic signaling pathway" evidence=ISO] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97352 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0008134 GO:GO:0043491 GO:GO:0000976
GO:GO:0004882 GO:GO:0071347 GO:GO:0071356 GO:GO:0030331
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:0045930 GO:GO:2001022 GO:GO:0060442
GO:GO:0071850 GO:GO:0000988 GO:GO:0030284 GO:GO:0060664
HOGENOM:HOG000231923 HOVERGEN:HBG006689 KO:K09348 GO:GO:0071899
CTD:4824 eggNOG:NOG238786 OMA:TEPERHL OrthoDB:EOG46Q6TS
GO:GO:0035907 GO:GO:2000836 EMBL:U73460 EMBL:U88542 IPI:IPI00125359
RefSeq:NP_035051.1 UniGene:Mm.3520 ProteinModelPortal:P97436
SMR:P97436 STRING:P97436 PhosphoSite:P97436 PRIDE:P97436
Ensembl:ENSMUST00000022646 GeneID:18095 KEGG:mmu:18095
InParanoid:P97436 NextBio:293247 Bgee:P97436 CleanEx:MM_NKX3-1
Genevestigator:P97436 GermOnline:ENSMUSG00000022061 GO:GO:0097162
GO:GO:0035260 Uniprot:P97436
Length = 237
Score = 124 (48.7 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 31/92 (33%), Positives = 44/92 (47%)
Query: 29 MMDCLEEEDCREEASQAT---EKKRRLTVD--QVKALEKNFEVDNKLEPDRKVKLAEELG 83
++DC A Q T +K+ R QV LE+ F L + LA+ L
Sbjct: 104 LLDCEHNPGDLASAPQVTKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLK 163
Query: 84 LQPRQIAVWFQNRRARLKSKELERDYGLLKAN 115
L Q+ +WFQNRR + K K+L D G+L+ N
Sbjct: 164 LTETQVKIWFQNRRYKTKRKQLSEDLGVLEKN 195
>UNIPROTKB|F1PND7 [details] [associations]
symbol:DBX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104097 EMBL:AAEX03015118
Ensembl:ENSCAFT00000014915 OMA:HEMRITL Uniprot:F1PND7
Length = 206
Score = 122 (48.0 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 22 YGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKL-EPDRKVKLAE 80
+ RE ++++ L + D +A + ++ + DQ KALEK F+ + + DRK KLA
Sbjct: 33 FARE-ESVLPLLTQ-DSNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRK-KLAI 89
Query: 81 ELGLQPRQIAVWFQNRRARLK-SKELE 106
LGL+ Q+ +WFQNRR + + SKE E
Sbjct: 90 SLGLKESQVKIWFQNRRMKWRNSKEKE 116
>UNIPROTKB|O97581 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006263 EMBL:AF063245 UniGene:Ssc.26829
ProteinModelPortal:O97581 SMR:O97581 Uniprot:O97581
Length = 383
Score = 128 (50.1 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 38/103 (36%), Positives = 55/103 (53%)
Query: 17 KRKQIYGREFQAMMD----CLEE-EDCREEASQATEKKRRLTVD--QVKALEKNFEVDNK 69
KR+ G EF M D C + E ++ ++AT K+ R T+ Q++ L+ + K
Sbjct: 107 KRQLATGDEFYLMEDSRLVCKADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPK 166
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
P R V+ L+ E GL R + VWFQNRRA K K L++D G
Sbjct: 167 --PARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAG 205
>ZFIN|ZDB-GENE-980526-167 [details] [associations]
symbol:eng2a "engrailed 2a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0001708 "cell fate specification" evidence=IGI]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-167 GO:GO:0005634 GO:GO:0001708 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0000976
GeneTree:ENSGT00680000099870 eggNOG:NOG306728 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 HOGENOM:HOG000247054 OrthoDB:EOG4H72D0 EMBL:X68151
EMBL:X68446 EMBL:X07622 EMBL:X59126 IPI:IPI00509115 PIR:A56557
PIR:S00562 RefSeq:NP_571119.2 UniGene:Dr.162132 UniGene:Dr.162307
UniGene:Dr.75073 ProteinModelPortal:P09015 SMR:P09015 STRING:P09015
Ensembl:ENSDART00000031700 GeneID:30243 KEGG:dre:30243 CTD:30243
InParanoid:P09015 OMA:ERHEECE NextBio:20806696 ArrayExpress:P09015
Bgee:P09015 Uniprot:P09015
Length = 265
Score = 125 (49.1 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 39 REEASQATEKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNR 96
+++A+ +K+ R T +Q++ L+ F+ + L R+ LA+ELGL QI +WFQN+
Sbjct: 168 KKKAASKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNK 227
Query: 97 RARLK 101
RA++K
Sbjct: 228 RAKIK 232
>ZFIN|ZDB-GENE-040724-40 [details] [associations]
symbol:lbx1a "ladybird homeobox 1a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040724-40 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 HOGENOM:HOG000007247
HOVERGEN:HBG006244 KO:K09353 OrthoDB:EOG4TTGJP EMBL:BX950184
EMBL:AL928816 IPI:IPI00513398 RefSeq:NP_001020703.1
UniGene:Dr.135691 Ensembl:ENSDART00000045351 GeneID:564103
KEGG:dre:564103 CTD:564103 InParanoid:Q6ZM39 OMA:DHTTSKE
NextBio:20885231 Uniprot:Q6ZM39
Length = 269
Score = 125 (49.1 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 36/99 (36%), Positives = 54/99 (54%)
Query: 46 TEKKRR-----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
T KKRR T Q+ LEK F L P + ++A++LGL Q+ WFQNRRA+L
Sbjct: 121 TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL 180
Query: 101 KSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRE 139
K ++LE +KA+ ++ + N+ E A A+L +
Sbjct: 181 K-RDLEE----MKADVESAKA-VGNVPFEKMAKLADLEK 213
>UNIPROTKB|Q9UBR4 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0009887 "organ morphogenesis" evidence=TAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0021983 GO:GO:0048839 GO:GO:0021527 EMBL:AL138781
GO:GO:0000988 GO:GO:0021521 Orphanet:226307 eggNOG:NOG275246
HOGENOM:HOG000231629 KO:K09374 GO:GO:0021520 HOVERGEN:HBG006263
CTD:8022 OMA:PLCAGCN EMBL:AF156888 EMBL:AF156889 EMBL:AH008761
EMBL:AF096169 EMBL:AF214637 EMBL:AF367089 EMBL:AF367085
EMBL:AF367086 EMBL:AF367087 EMBL:AF367088 IPI:IPI00002747
IPI:IPI00220680 RefSeq:NP_055379.1 RefSeq:NP_835258.1
UniGene:Hs.148427 ProteinModelPortal:Q9UBR4 SMR:Q9UBR4
STRING:Q9UBR4 PhosphoSite:Q9UBR4 DMDM:12643415 PRIDE:Q9UBR4
DNASU:8022 Ensembl:ENST00000371746 Ensembl:ENST00000371748
GeneID:8022 KEGG:hsa:8022 UCSC:uc004cha.3 GeneCards:GC09M139088
HGNC:HGNC:6595 MIM:221750 MIM:600577 neXtProt:NX_Q9UBR4
Orphanet:231720 PharmGKB:PA30366 OrthoDB:EOG4SBDZ0 ChiTaRS:LHX3
GenomeRNAi:8022 NextBio:30588 ArrayExpress:Q9UBR4 Bgee:Q9UBR4
CleanEx:HS_LHX3 Genevestigator:Q9UBR4 GermOnline:ENSG00000107187
GO:GO:0021526 Uniprot:Q9UBR4
Length = 397
Score = 128 (50.1 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 38/103 (36%), Positives = 55/103 (53%)
Query: 17 KRKQIYGREFQAMMD----CLEE-EDCREEASQATEKKRRLTVD--QVKALEKNFEVDNK 69
KR+ G EF M D C + E ++ ++AT K+ R T+ Q++ L+ + K
Sbjct: 122 KRQLATGDEFYLMEDSRLVCKADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPK 181
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
P R V+ L+ E GL R + VWFQNRRA K K L++D G
Sbjct: 182 --PARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAG 220
>UNIPROTKB|A6NLG4 [details] [associations]
symbol:SHOX2 "cDNA FLJ38019 fis, clone CTONG2012758, highly
similar to Short stature homeobox protein 2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471052
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 UniGene:Hs.55967 HGNC:HGNC:10854
HOVERGEN:HBG007233 NextBio:25151 EMBL:AC112502 EMBL:AK095338
IPI:IPI01024865 SMR:A6NLG4 STRING:A6NLG4 Ensembl:ENST00000441443
Ensembl:ENST00000490689 Uniprot:A6NLG4
Length = 190
Score = 120 (47.3 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 36/123 (29%), Positives = 68/123 (55%)
Query: 40 EEASQATEKKRR----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQN 95
E+ Q K+RR T++Q+ LE+ F+ + + + +L++ LGL ++ VWFQN
Sbjct: 2 EDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQN 61
Query: 96 RRARLKSKELERDYGLL---KANYDALRL-DYNNLQQENEALTAELRELKAKLCQENEET 151
RRA+ + +E + G+L + ++A R+ Y N+ AL ++++A+L Q +
Sbjct: 62 RRAKCRKQENQLHKGVLIGAASQFEACRVAPYVNVG----ALRMPFQQVQAQL-QLDSAV 116
Query: 152 SHA 154
+HA
Sbjct: 117 AHA 119
>MGI|MGI:102673 [details] [associations]
symbol:Lhx3 "LIM homeobox protein 3" species:10090 "Mus
musculus" [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001890
"placenta development" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IGI] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IDA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IGI] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IDA] [GO:0021983
"pituitary gland development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:102673 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890 GO:GO:0021983
GO:GO:0048839 GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 GO:GO:0021520 PDB:2RGT PDBsum:2RGT PDB:2JTN PDBsum:2JTN
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN OrthoDB:EOG4SBDZ0
GO:GO:0021526 EMBL:L33776 EMBL:L38857 EMBL:L38249 EMBL:L38248
IPI:IPI00118214 IPI:IPI00263557 PIR:I59360 RefSeq:NP_001034742.1
UniGene:Mm.386765 ProteinModelPortal:P50481 SMR:P50481
MINT:MINT-7009840 STRING:P50481 PhosphoSite:P50481 PRIDE:P50481
Ensembl:ENSMUST00000028302 Ensembl:ENSMUST00000054099 GeneID:16871
KEGG:mmu:16871 EvolutionaryTrace:P50481 NextBio:290838 Bgee:P50481
CleanEx:MM_LHX3 Genevestigator:P50481 GermOnline:ENSMUSG00000026934
Uniprot:P50481
Length = 400
Score = 128 (50.1 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 38/103 (36%), Positives = 55/103 (53%)
Query: 17 KRKQIYGREFQAMMD----CLEE-EDCREEASQATEKKRRLTVD--QVKALEKNFEVDNK 69
KR+ G EF M D C + E ++ ++AT K+ R T+ Q++ L+ + K
Sbjct: 125 KRQLATGDEFYLMEDSRLVCKADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPK 184
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
P R V+ L+ E GL R + VWFQNRRA K K L++D G
Sbjct: 185 --PARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAG 223
>UNIPROTKB|G3V8E3 [details] [associations]
symbol:Lhx3 "Protein Lhx3" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 RefSeq:XP_002726117.1 RefSeq:XP_002729190.1
UniGene:Rn.198623 PRIDE:G3V8E3 Ensembl:ENSRNOT00000025047
GeneID:170671 KEGG:rno:170671 NextBio:621169 Uniprot:G3V8E3
Length = 400
Score = 128 (50.1 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 38/103 (36%), Positives = 55/103 (53%)
Query: 17 KRKQIYGREFQAMMD----CLEE-EDCREEASQATEKKRRLTVD--QVKALEKNFEVDNK 69
KR+ G EF M D C + E ++ ++AT K+ R T+ Q++ L+ + K
Sbjct: 125 KRQLATGDEFYLMEDSRLVCKADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPK 184
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
P R V+ L+ E GL R + VWFQNRRA K K L++D G
Sbjct: 185 --PARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAG 223
>UNIPROTKB|G3V9E7 [details] [associations]
symbol:Lhx3 "RCG45383, isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 OMA:PLCAGCN UniGene:Rn.198623 GeneID:170671
KEGG:rno:170671 NextBio:621169 RefSeq:XP_001059910.2
RefSeq:XP_001078243.2 Ensembl:ENSRNOT00000045587 Uniprot:G3V9E7
Length = 402
Score = 128 (50.1 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 38/103 (36%), Positives = 55/103 (53%)
Query: 17 KRKQIYGREFQAMMD----CLEE-EDCREEASQATEKKRRLTVD--QVKALEKNFEVDNK 69
KR+ G EF M D C + E ++ ++AT K+ R T+ Q++ L+ + K
Sbjct: 127 KRQLATGDEFYLMEDSRLVCKADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPK 186
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
P R V+ L+ E GL R + VWFQNRRA K K L++D G
Sbjct: 187 --PARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAG 225
>UNIPROTKB|Q2TEA4 [details] [associations]
symbol:Lhx3 "LIM homeodomain 3 protein b isoform"
species:9913 "Bos taurus" [GO:0048839 "inner ear development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0021521 "ventral spinal cord interneuron
specification" evidence=IEA] [GO:0021520 "spinal cord motor neuron
cell fate specification" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021983 GO:GO:0048839
GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021520
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN GO:GO:0021526
EMBL:DAAA02032311 EMBL:AY923832 EMBL:AY923833 IPI:IPI00687531
IPI:IPI01028343 RefSeq:NP_001033709.1 UniGene:Bt.45155
Ensembl:ENSBTAT00000055580 GeneID:539213 KEGG:bta:539213
NextBio:20877851 Uniprot:Q2TEA4
Length = 403
Score = 128 (50.1 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 38/103 (36%), Positives = 55/103 (53%)
Query: 17 KRKQIYGREFQAMMD----CLEE-EDCREEASQATEKKRRLTVD--QVKALEKNFEVDNK 69
KR+ G EF M D C + E ++ ++AT K+ R T+ Q++ L+ + K
Sbjct: 127 KRQLATGDEFYLMEDSRLVCKADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPK 186
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
P R V+ L+ E GL R + VWFQNRRA K K L++D G
Sbjct: 187 --PARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAG 225
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 107 (42.7 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 47 EKKRRLTVDQVKA-LEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR 99
EK R + D + LEK F + + RK +LA LGL RQ+ +WFQNRRA+
Sbjct: 2 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAK 55
>UNIPROTKB|F1MJX0 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
Length = 142
Score = 107 (42.7 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 46 TEKKRRL--TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR---L 100
T+ K R+ T Q LEK F + RK +LA LGL RQ+ +WFQNRRA+ +
Sbjct: 21 TKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKI 80
Query: 101 KSKELER 107
K+L++
Sbjct: 81 NKKKLQQ 87
>UNIPROTKB|P51783 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:10141 "Cavia
porcellus" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
GO:GO:0045638 HOGENOM:HOG000294138 HOVERGEN:HBG016849
OrthoDB:EOG4D26QZ EMBL:X13536 PIR:A48428 ProteinModelPortal:P51783
SMR:P51783 Uniprot:P51783
Length = 162
Score = 114 (45.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 43 SQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+++T KKR T Q LEK F + L DR+ ++A L L RQ+ +WFQNRR +K
Sbjct: 93 ARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRR--MK 150
Query: 102 SKELERD 108
K++ +D
Sbjct: 151 MKKINKD 157
>ZFIN|ZDB-GENE-040426-1457 [details] [associations]
symbol:shox2 "short stature homeobox 2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040426-1457 GO:GO:0005634 GO:GO:0007507 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 HSSP:P06601 CTD:6474 eggNOG:NOG113578
HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2 EMBL:BX004974
EMBL:BC056324 EMBL:BC065345 IPI:IPI00491363 RefSeq:NP_957490.1
UniGene:Dr.26980 SMR:Q7SZN8 Ensembl:ENSDART00000009564
GeneID:394171 KEGG:dre:394171 InParanoid:Q7SZN8 NextBio:20815116
Uniprot:Q7SZN8
Length = 299
Score = 125 (49.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 32/102 (31%), Positives = 60/102 (58%)
Query: 35 EEDCR--EEASQATEKKRR----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQ 88
+EDC+ E+ +Q K+RR T++Q+ LE+ F+ + + + +L++ LGL +
Sbjct: 92 KEDCKPLEDETQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 151
Query: 89 IAVWFQNRRARLKSKELERDYGLL---KANYDALRL-DYNNL 126
+ VWFQNRRA+ + +E + G+L + ++A R+ Y N+
Sbjct: 152 VQVWFQNRRAKCRKQENQLHKGVLIGAASQFEACRVAPYVNV 193
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/58 (44%), Positives = 32/58 (55%)
Query: 47 EKKRRLTV---DQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
E KR T QV LEK F + L R+V++A L L RQI +WFQNRR + K
Sbjct: 9 EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 66
>UNIPROTKB|P24340 [details] [associations]
symbol:HOXD9 "Homeobox protein Hox-D9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231180 eggNOG:NOG288226
OrthoDB:EOG4SXNCJ IPI:IPI00814164 PIR:S14797 UniGene:Gga.12699
ProteinModelPortal:P24340 SMR:P24340 STRING:P24340
InParanoid:P24340 Uniprot:P24340
Length = 60
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 46 TEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
T KKR T Q LEK F + L DR+ ++A L L RQ+ +WFQNRR ++K
Sbjct: 1 TRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMK 57
>RGD|1563929 [details] [associations]
symbol:Nobox "NOBOX oogenesis homeobox" species:10116 "Rattus
norvegicus" [GO:0001541 "ovarian follicle development"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
RGD:1563929 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001541 EMBL:CH473959
CTD:135935 GeneTree:ENSGT00650000093445 OMA:PLLMDVP
OrthoDB:EOG4JQ3X2 IPI:IPI00394115 RefSeq:NP_001178942.1
UniGene:Rn.228183 Ensembl:ENSRNOT00000029651 GeneID:502759
KEGG:rno:502759 UCSC:RGD:1563929 NextBio:712378 Uniprot:D3ZXL8
Length = 524
Score = 126 (49.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 35 EEDCREEASQAT---EKKRRLTV--DQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQI 89
E D ++E +AT KK R DQ++ LE+ F+ D+ + D++ ++A+ +G+ P++I
Sbjct: 120 ERDLKKEPLEATCQFRKKTRTLYRSDQLEELERIFQEDHYPDSDKRHEIAQMVGVTPQRI 179
Query: 90 AVWFQNRRARLKSKE 104
VWFQNRRA+ + E
Sbjct: 180 MVWFQNRRAKWRKVE 194
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 148 NEETSHAVEAEAPVSEQSKN 167
+E+TS ++E AP + KN
Sbjct: 495 DEQTSSSLEQPAPEEVRDKN 514
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/96 (31%), Positives = 57/96 (59%)
Query: 36 EDCREEASQATEKKR--RLTVDQVKALEKNF-EVDNKLEPDRKVKLAEELGLQPRQIAVW 92
E+ ++ + + +KKR R T Q++ LE F E + + RK +L+ +L L+P Q+ W
Sbjct: 51 EELQDPSQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRK-ELSRDLNLEPLQVKFW 109
Query: 93 FQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQ 128
FQN+R ++K++ + +LK++ D LR + N ++
Sbjct: 110 FQNKRTQMKAQSERHENQILKSDNDKLRAENNRYKE 145
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/130 (28%), Positives = 71/130 (54%)
Query: 2 GSETFDHFHEDKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKR--RLTVDQVKA 59
G +TFD ++ + + R ++ + ED ++ A + KKR R T Q++
Sbjct: 92 GGDTFDGSVNRRSREEEHE--SRSGSDNVEGISGED-QDAADKPPRKKRYHRHTPQQIQE 148
Query: 60 LEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELER-DYGLLKANYDA 118
LE F+ + ++++L++ L L+ RQ+ WFQNRR ++K+ +LER + LL+ D
Sbjct: 149 LESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHENALLRQENDK 207
Query: 119 LRLDYNNLQQ 128
LR + ++++
Sbjct: 208 LRAENMSIRE 217
>UNIPROTKB|E1B707 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 KO:K09353 CTD:85474 OMA:MVPRAPS
EMBL:DAAA02030322 IPI:IPI00705587 RefSeq:NP_001179057.1
UniGene:Bt.106435 Ensembl:ENSBTAT00000022088 GeneID:538906
KEGG:bta:538906 NextBio:20877656 Uniprot:E1B707
Length = 196
Score = 119 (46.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 41 EASQATEKKRR-LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR 99
+A + K R T QV LE+ F L P + LA LGL Q+ WFQNRRA+
Sbjct: 80 QAGRRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLASRLGLANAQVVTWFQNRRAK 139
Query: 100 LKS--KELERDYGLLKA 114
LK +E+ D L++
Sbjct: 140 LKRDVEEMRADLASLRS 156
>UNIPROTKB|F1SNT2 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 KO:K09353 OMA:MVPRAPS EMBL:CU468647
RefSeq:XP_003125045.1 Ensembl:ENSSSCT00000009066 GeneID:100514830
KEGG:ssc:100514830 Uniprot:F1SNT2
Length = 196
Score = 119 (46.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/76 (39%), Positives = 38/76 (50%)
Query: 42 ASQATEKKRR-LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
A + K R T QV LE+ F L P + LA LGL Q+ WFQNRRA+L
Sbjct: 81 AGRRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKL 140
Query: 101 KS--KELERDYGLLKA 114
K +E+ D L+A
Sbjct: 141 KRDVEEMRADVASLRA 156
>MGI|MGI:96086 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0007049 "cell cycle" evidence=ISO] [GO:0007165
"signal transduction" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008190 "eukaryotic initiation factor 4E
binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IMP]
[GO:0030097 "hemopoiesis" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IMP] [GO:0030183 "B cell
differentiation" evidence=IMP] [GO:0030878 "thyroid gland
development" evidence=IMP] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0032993 "protein-DNA complex" evidence=ISO] [GO:0034504
"protein localization to nucleus" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048568
"embryonic organ development" evidence=IMP] [GO:0048729 "tissue
morphogenesis" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060431 "primary lung bud formation"
evidence=IMP] [GO:0061009 "common bile duct development"
evidence=IMP] [GO:0061010 "gall bladder development" evidence=IMP]
[GO:0061011 "hepatic duct development" evidence=IMP] [GO:0061017
"hepatoblast differentiation" evidence=IMP] [GO:0070365 "hepatocyte
differentiation" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0071103 "DNA
conformation change" evidence=ISO] [GO:0071837 "HMG box domain
binding" evidence=IPI] [GO:0090009 "primitive streak formation"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96086 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0009611 GO:GO:0016055 GO:GO:0043565
GO:GO:0001701 GO:GO:0043434 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0016525 GO:GO:0031016
GO:GO:0007492 GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905
GO:GO:0034504 GO:GO:0032993 GO:GO:0048568 GO:GO:0090009
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0016973
GO:GO:0030878 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR GO:GO:0071103 GO:GO:0061010
GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431 EMBL:Z21524
EMBL:AB017132 EMBL:AF132550 EMBL:AK014111 EMBL:AK033664
EMBL:BC057986 IPI:IPI00474062 PIR:S30230 RefSeq:NP_032271.1
UniGene:Mm.33896 ProteinModelPortal:P43120 SMR:P43120 STRING:P43120
PhosphoSite:P43120 PRIDE:P43120 Ensembl:ENSMUST00000025944
GeneID:15242 KEGG:mmu:15242 UCSC:uc008hio.1 InParanoid:P43120
NextBio:287843 Bgee:P43120 CleanEx:MM_HHEX Genevestigator:P43120
GermOnline:ENSMUSG00000024986 Uniprot:P43120
Length = 271
Score = 123 (48.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 51 RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
R + DQ LEK FE L P + +LA+ L L RQ+ WFQNRRA+ + + E
Sbjct: 144 RFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 111 LLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVS 170
K D+L D + +Q + + + + Q + + + ++ +SE S V
Sbjct: 204 NKKDALDSL--D-TSCEQGQDLPSEQNKGASLDRSQCSPSPASQEDPDSEISEDSDQEVD 260
Query: 171 SE 172
E
Sbjct: 261 IE 262
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 105 (42.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 46 TEKKRRL--TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR---L 100
T+ K R+ T Q LEK F + RK +LA LGL RQ+ +WFQNRRA+ +
Sbjct: 5 TKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKV 64
Query: 101 KSKELER 107
K+L++
Sbjct: 65 NKKKLQQ 71
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 105 (42.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 42 ASQATEKKRRL-TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
+S+ T++ R+ + Q LEK F + L R+++++ LGL RQ+ +WFQNRR +
Sbjct: 7 SSRRTQRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKW 66
Query: 101 KSKELERD 108
K KE +D
Sbjct: 67 K-KENNKD 73
>UNIPROTKB|F1S681 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 GO:GO:0021526
OMA:LSFRDDQ EMBL:CU855640 EMBL:FP476046 Ensembl:ENSSSCT00000016925
Uniprot:F1S681
Length = 369
Score = 125 (49.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 47/131 (35%), Positives = 69/131 (52%)
Query: 18 RKQIYGREFQAMMD----CLEE-EDCRE-EASQATEKKRRLTVDQVKALE--KNFEVDNK 69
R+ G EF M D C E+ E ++ + S+A K+ R T+ K LE KN N
Sbjct: 101 RQLATGDEFYLMEDGRLVCKEDYETAKQNDDSEAGAKRPRTTIT-AKQLETLKN-AYKNS 158
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKAN--YDALRLDYNN 125
+P R V+ L+ E GL R + VWFQNRRA K K L++D G + Y +++ +
Sbjct: 159 PKPARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAGRHRWGQFYKSVKRSRGS 216
Query: 126 LQQENEALTAE 136
+QE E+ +AE
Sbjct: 217 SKQEKES-SAE 226
>UNIPROTKB|Q969G2 [details] [associations]
symbol:LHX4 "LIM/homeobox protein Lhx4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 EMBL:AL139141 Orphanet:226307
Orphanet:95496 eggNOG:NOG275246 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0 GO:GO:0021526 EMBL:AY053457
EMBL:AF179849 EMBL:AF405430 EMBL:AF405425 EMBL:AF405426
EMBL:AF405427 EMBL:AF405428 EMBL:AF405429 EMBL:BC011759
EMBL:AB055703 EMBL:AB037683 EMBL:AF282899 EMBL:AH011598
IPI:IPI00169275 RefSeq:NP_203129.1 UniGene:Hs.658487
ProteinModelPortal:Q969G2 SMR:Q969G2 IntAct:Q969G2 STRING:Q969G2
DMDM:209572644 PRIDE:Q969G2 DNASU:89884 Ensembl:ENST00000263726
GeneID:89884 KEGG:hsa:89884 UCSC:uc001goe.2 CTD:89884
GeneCards:GC01P180199 HGNC:HGNC:21734 MIM:262700 MIM:602146
neXtProt:NX_Q969G2 Orphanet:85442 PharmGKB:PA134962876
InParanoid:Q969G2 OMA:LSFRDDQ PhylomeDB:Q969G2 GenomeRNAi:89884
NextBio:76401 ArrayExpress:Q969G2 Bgee:Q969G2 CleanEx:HS_LHX4
Genevestigator:Q969G2 GermOnline:ENSG00000121454 Uniprot:Q969G2
Length = 390
Score = 125 (49.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/131 (35%), Positives = 69/131 (52%)
Query: 18 RKQIYGREFQAMMD----CLEE-EDCRE-EASQATEKKRRLTVDQVKALE--KNFEVDNK 69
R+ G EF M D C E+ E ++ + S+A K+ R T+ K LE KN N
Sbjct: 122 RQLATGDEFYLMEDGRLVCKEDYETAKQNDDSEAGAKRPRTTIT-AKQLETLKN-AYKNS 179
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKAN--YDALRLDYNN 125
+P R V+ L+ E GL R + VWFQNRRA K K L++D G + Y +++ +
Sbjct: 180 PKPARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAGRHRWGQFYKSVKRSRGS 237
Query: 126 LQQENEALTAE 136
+QE E+ +AE
Sbjct: 238 SKQEKES-SAE 247
>UNIPROTKB|Q6ZNG2 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG270330 HSSP:P06602 HOGENOM:HOG000112172
CTD:440097 HOVERGEN:HBG104467 OMA:GTRWAFQ OrthoDB:EOG4MPHQG
EMBL:AK131230 EMBL:AC008127 EMBL:AC079033 EMBL:AC089986
IPI:IPI00418609 RefSeq:NP_001004329.2 UniGene:Hs.302764
ProteinModelPortal:Q6ZNG2 SMR:Q6ZNG2 STRING:Q6ZNG2
PhosphoSite:Q6ZNG2 DMDM:296434473 PRIDE:Q6ZNG2 DNASU:440097
Ensembl:ENST00000332700 GeneID:440097 KEGG:hsa:440097
UCSC:uc001rok.1 GeneCards:GC12M045408 HGNC:HGNC:33186
neXtProt:NX_Q6ZNG2 PharmGKB:PA162383249 InParanoid:Q6ZNG2
GenomeRNAi:440097 NextBio:108942 Bgee:Q6ZNG2 CleanEx:HS_DBX2
Genevestigator:Q6ZNG2 Uniprot:Q6ZNG2
Length = 339
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/87 (39%), Positives = 52/87 (59%)
Query: 22 YGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKL-EPDRKVKLAE 80
+ RE ++M+ L + D +A + ++ + DQ KALEK F+ + + DRK KLA
Sbjct: 165 FPRE-ESMLPLLTQ-DSNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRK-KLAI 221
Query: 81 ELGLQPRQIAVWFQNRRARLK-SKELE 106
LGL+ Q+ +WFQNRR + + SKE E
Sbjct: 222 NLGLKESQVKIWFQNRRMKWRNSKEKE 248
>WB|WBGene00000432 [details] [associations]
symbol:ceh-7 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00680000099870
EMBL:AF091459 EMBL:Z66494 PIR:S05708 PIR:T43646 RefSeq:NP_495848.1
UniGene:Cel.9303 ProteinModelPortal:P20270 SMR:P20270
EnsemblMetazoa:C34C6.8 GeneID:174391 KEGG:cel:CELE_C34C6.8
UCSC:C34C6.8 CTD:174391 WormBase:C34C6.8 eggNOG:NOG298372
HOGENOM:HOG000294138 InParanoid:P20270 OMA:RRIRMRR NextBio:883830
Uniprot:P20270
Length = 84
Score = 104 (41.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 39 REEASQATEKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNR 96
R EAS + +RR TV+Q+ LE F + D + +LA L L Q+ +WFQNR
Sbjct: 15 RPEASTSRIPRRRTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQVKIWFQNR 74
Query: 97 RARLK 101
R R++
Sbjct: 75 RIRMR 79
>UNIPROTKB|F6QGM2 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0000988 EMBL:AADN02026398 IPI:IPI00820696
ProteinModelPortal:F6QGM2 Ensembl:ENSGALT00000006259
ArrayExpress:F6QGM2 Uniprot:F6QGM2
Length = 214
Score = 119 (46.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 38/100 (38%), Positives = 54/100 (54%)
Query: 17 KRKQIYGREFQAMMD----CLEE-EDCREEASQATEKKRRLTVDQVKALE--KNFEVDNK 69
KR+ G EF M D C + E ++ +++T K+ R T+ K LE KN +N
Sbjct: 119 KRQLATGDEFYLMEDSRLVCKADYETAKQREAESTAKRPRTTIT-AKQLETLKN-AYNNS 176
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELER 107
+P R V+ L+ E GL R + VWFQNRRA K K L++
Sbjct: 177 PKPARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKK 214
>UNIPROTKB|F1NE14 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00682592
Ensembl:ENSGALT00000018035 Uniprot:F1NE14
Length = 169
Score = 114 (45.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 43 SQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+++T KKR T Q LEK F + L DR+ ++A L L RQ+ +WFQNRR +K
Sbjct: 100 ARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRR--MK 157
Query: 102 SKELERD 108
K++ +D
Sbjct: 158 MKKINKD 164
>UNIPROTKB|Q98924 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
HOVERGEN:HBG016849 HOGENOM:HOG000231180 EMBL:X97750 IPI:IPI00583350
UniGene:Gga.649 ProteinModelPortal:Q98924 SMR:Q98924 STRING:Q98924
InParanoid:Q98924 Uniprot:Q98924
Length = 169
Score = 114 (45.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 43 SQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+++T KKR T Q LEK F + L DR+ ++A L L RQ+ +WFQNRR +K
Sbjct: 100 ARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRR--MK 157
Query: 102 SKELERD 108
K++ +D
Sbjct: 158 MKKINKD 164
>UNIPROTKB|F6Y4K5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 CTD:6474 KO:K09331
OMA:CTEAGRD EMBL:AAEX03013721 Ensembl:ENSCAFT00000014128
RefSeq:XP_003639881.1 GeneID:485732 KEGG:cfa:485732 Uniprot:F6Y4K5
Length = 319
Score = 123 (48.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/130 (29%), Positives = 72/130 (55%)
Query: 35 EEDCR--EEASQATEKKRR----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQ 88
+ED + E+ Q K+RR T++Q+ LE+ F+ + + + +L++ LGL +
Sbjct: 124 KEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 183
Query: 89 IAVWFQNRRARLKSKELERDYGLL---KANYDALRL-DYNNLQQENEALTAELRELKAKL 144
+ VWFQNRRA+ + +E + G+L + ++A R+ Y N+ AL ++++A+L
Sbjct: 184 VQVWFQNRRAKCRKQENQLHKGVLIGAASQFEACRVAPYVNVG----ALRMPFQQVQAQL 239
Query: 145 CQENEETSHA 154
Q + +HA
Sbjct: 240 -QLDSAVAHA 248
>UNIPROTKB|I3L828 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
KO:K09331 OMA:CTEAGRD GO:GO:0003170 EMBL:FP312663
RefSeq:NP_001230281.1 UniGene:Ssc.38718 Ensembl:ENSSSCT00000025053
GeneID:100628206 KEGG:ssc:100628206 Uniprot:I3L828
Length = 321
Score = 123 (48.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/130 (29%), Positives = 72/130 (55%)
Query: 35 EEDCR--EEASQATEKKRR----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQ 88
+ED + E+ Q K+RR T++Q+ LE+ F+ + + + +L++ LGL +
Sbjct: 126 KEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 185
Query: 89 IAVWFQNRRARLKSKELERDYGLL---KANYDALRL-DYNNLQQENEALTAELRELKAKL 144
+ VWFQNRRA+ + +E + G+L + ++A R+ Y N+ AL ++++A+L
Sbjct: 186 VQVWFQNRRAKCRKQENQLHKGVLIGAASQFEACRVAPYVNVG----ALRMPFQQVQAQL 241
Query: 145 CQENEETSHA 154
Q + +HA
Sbjct: 242 -QLDSAVAHA 250
>UNIPROTKB|B0W1V2 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7176 "Culex quinquefasciatus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968
OrthoDB:EOG4F7M1W Gene3D:1.10.10.60 InterPro:IPR022132
InterPro:IPR020479 Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:DS231824 RefSeq:XP_001842686.1 ProteinModelPortal:B0W1V2
SMR:B0W1V2 EnsemblMetazoa:CPIJ001016-RA GeneID:6032019
KEGG:cqu:CpipJ_CPIJ001016 VectorBase:CPIJ001016 OMA:CHGIASP
PhylomeDB:B0W1V2 Uniprot:B0W1V2
Length = 216
Score = 119 (46.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKAN 115
Q LEK F ++ L R++++A L L RQI +WFQNRR +LK KEL + + N
Sbjct: 54 QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK-KELR---AVKEIN 109
Query: 116 YDALRLDYNNLQQENEALTAELRELKAKLCQENEET 151
A R + +N++L + + +++ Q+ E T
Sbjct: 110 EQARREREEQDKMKNDSLKSAQQHHQSQKQQQQEHT 145
>UNIPROTKB|F1MFM7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021526
CTD:89884 OMA:LSFRDDQ EMBL:DAAA02043487 EMBL:DAAA02043488
EMBL:DAAA02043489 EMBL:DAAA02043490 IPI:IPI00695061
RefSeq:NP_001179714.1 UniGene:Bt.60930 Ensembl:ENSBTAT00000005216
GeneID:540797 KEGG:bta:540797 NextBio:20878839 Uniprot:F1MFM7
Length = 390
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 47/131 (35%), Positives = 68/131 (51%)
Query: 18 RKQIYGREFQAMMD----CLEE-EDCRE-EASQATEKKRRLTVDQVKALE--KNFEVDNK 69
R+ G EF M D C E+ E ++ + S+A K+ R T+ K LE KN N
Sbjct: 122 RQLATGDEFYLMEDGRLVCKEDYETAKQNDDSEAGAKRPRTTIT-AKQLETLKN-AYKNS 179
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKAN--YDALRLDYNN 125
+P R V+ L+ E GL R + VWFQNRRA K K L++D G + Y +++
Sbjct: 180 PKPARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAGRHRWGQFYKSVKRSRGG 237
Query: 126 LQQENEALTAE 136
+QE E+ +AE
Sbjct: 238 SKQEKES-SAE 247
>MGI|MGI:101776 [details] [associations]
symbol:Lhx4 "LIM homeobox protein 4" species:10090 "Mus
musculus" [GO:0001890 "placenta development" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101776 GO:GO:0005634 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 PDB:3MMK PDBsum:3MMK HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0
GO:GO:0021526 CTD:89884 OMA:LSFRDDQ EMBL:BC049834 EMBL:AF135415
EMBL:U89343 EMBL:S71659 IPI:IPI00134772 PIR:S46332
RefSeq:NP_034842.2 UniGene:Mm.103624 UniGene:Mm.351266
ProteinModelPortal:P53776 SMR:P53776 STRING:P53776 PRIDE:P53776
Ensembl:ENSMUST00000027740 GeneID:16872 KEGG:mmu:16872
UCSC:uc007dbn.2 InParanoid:P53776 NextBio:290842 Bgee:P53776
CleanEx:MM_LHX4 Genevestigator:P53776 GermOnline:ENSMUSG00000026468
Uniprot:P53776
Length = 390
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 47/131 (35%), Positives = 68/131 (51%)
Query: 18 RKQIYGREFQAMMD----CLEE-EDCRE-EASQATEKKRRLTVDQVKALE--KNFEVDNK 69
R+ G EF M D C E+ E ++ + S+A K+ R T+ K LE KN N
Sbjct: 122 RQLATGDEFYLMEDGRLVCKEDYETAKQNDDSEAGAKRPRTTIT-AKQLETLKN-AYKNS 179
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKAN--YDALRLDYNN 125
+P R V+ L+ E GL R + VWFQNRRA K K L++D G + Y +++
Sbjct: 180 PKPARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAGRHRWGQFYKSVKRSRGG 237
Query: 126 LQQENEALTAE 136
+QE E+ +AE
Sbjct: 238 SKQEKES-SAE 247
>UNIPROTKB|G1K364 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
UniGene:Gga.957 OMA:GGCRETA NextBio:20815412 InterPro:IPR021918
Pfam:PF12045 GeneTree:ENSGT00700000104263 EMBL:AADN02000990
EMBL:AADN02000991 EMBL:AADN02000992 EMBL:AADN02000993
Ensembl:ENSGALT00000037819 Uniprot:G1K364
Length = 296
Score = 122 (48.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 35 EEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
EE + Q T KKR T Q++ LE+ F + +++++L+ L L RQ+ +WF
Sbjct: 213 EEKSGSSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 272
Query: 94 QNRRARLKSKELERD 108
QNRR +K K++ RD
Sbjct: 273 QNRR--MKEKKINRD 285
>UNIPROTKB|P31258 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0032332 GO:GO:0048589 GO:GO:0032993
GO:GO:0001759 EMBL:M81250 IPI:IPI00585648 RefSeq:NP_989950.1
RefSeq:XP_003640756.1 RefSeq:XP_003640763.1 UniGene:Gga.957
ProteinModelPortal:P31258 SMR:P31258 STRING:P31258 GeneID:100858967
GeneID:100859078 GeneID:395327 KEGG:gga:100858967
KEGG:gga:100859078 KEGG:gga:395327 CTD:3207 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 InParanoid:P31258 KO:K09296
OMA:GGCRETA NextBio:20815412 ArrayExpress:P31258 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 Uniprot:P31258
Length = 297
Score = 122 (48.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 35 EEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
EE + Q T KKR T Q++ LE+ F + +++++L+ L L RQ+ +WF
Sbjct: 214 EEKSGSSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 273
Query: 94 QNRRARLKSKELERD 108
QNRR +K K++ RD
Sbjct: 274 QNRR--MKEKKINRD 286
>UNIPROTKB|F1PCI5 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 GeneTree:ENSGT00700000104177
GO:GO:0021526 OMA:LSFRDDQ EMBL:AAEX03005118 EMBL:AAEX03005119
Ensembl:ENSCAFT00000031328 Uniprot:F1PCI5
Length = 395
Score = 124 (48.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 47/131 (35%), Positives = 68/131 (51%)
Query: 18 RKQIYGREFQAMMD----CLEE-EDCRE-EASQATEKKRRLTVDQVKALE--KNFEVDNK 69
R+ G EF M D C E+ E ++ + S+A K+ R T+ K LE KN N
Sbjct: 127 RQLATGDEFYLMEDGRLVCKEDYETAKQNDDSEAGAKRPRTTIT-AKQLETLKN-AYKNS 184
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKAN--YDALRLDYNN 125
+P R V+ L+ E GL R + VWFQNRRA K K L++D G + Y +++
Sbjct: 185 PKPARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAGRHRWGQFYKSVKRSRGG 242
Query: 126 LQQENEALTAE 136
+QE E+ +AE
Sbjct: 243 SKQEKES-SAE 252
>UNIPROTKB|Q28J15 [details] [associations]
symbol:hesx1 "Homeobox expressed in ES cells 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0030900
"forebrain development" evidence=ISS] [GO:0045664 "regulation of
neuron differentiation" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0060061 "Spemann organizer formation" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045664 GO:GO:0043565 GO:GO:0030900
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
CTD:8820 eggNOG:NOG326168 HOGENOM:HOG000112889 HOVERGEN:HBG004226
KO:K09354 GO:GO:0060061 OrthoDB:EOG46T32J EMBL:CR760108
EMBL:BC159020 RefSeq:NP_001016712.1 UniGene:Str.27088
ProteinModelPortal:Q28J15 STRING:Q28J15 GeneID:549466
KEGG:xtr:549466 Xenbase:XB-GENE-483193 Bgee:Q28J15 Uniprot:Q28J15
Length = 186
Score = 116 (45.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/97 (34%), Positives = 51/97 (52%)
Query: 23 GREFQAMMD-CLEEED---CREEASQATEKKRR--LTVDQVKALEKNFEVDNKLEPDRKV 76
G E Q ++ C EED + E S ++ R T Q++ LE F V++ D +
Sbjct: 81 GEETQVRLEKCCGEEDRLTYKRELSWYRGRRPRTAFTRSQIEILENVFRVNSYPGIDIRE 140
Query: 77 KLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLK 113
+LA +L L +I +WFQNRRA+LK E + ++K
Sbjct: 141 ELAGKLALDEDRIQIWFQNRRAKLKRSHRESQFLMVK 177
>UNIPROTKB|H0YJ32 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HGNC:HGNC:10854
EMBL:AC112502 Ensembl:ENST00000555977 Uniprot:H0YJ32
Length = 178
Score = 115 (45.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 31/102 (30%), Positives = 58/102 (56%)
Query: 35 EEDCR--EEASQATEKKRR----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQ 88
+ED + E+ Q K+RR T++Q+ LE+ F+ + + + +L++ LGL +
Sbjct: 28 KEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 87
Query: 89 IAVWFQNRRARLKSKELERDYGLL---KANYDALRL-DYNNL 126
+ VWFQNRRA+ + +E + G+L + ++A R+ Y N+
Sbjct: 88 VQVWFQNRRAKCRKQENQLHKGVLIGAASQFEACRVAPYVNV 129
>UNIPROTKB|F1P4V0 [details] [associations]
symbol:F1P4V0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 EMBL:AADN02020016 IPI:IPI00596552
Ensembl:ENSGALT00000015078 OMA:VKENQIS Uniprot:F1P4V0
Length = 67
Score = 103 (41.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELE 106
Q+ LEK F L R++++A L L+ Q+ VWFQNRR + K +E E
Sbjct: 12 QLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERE 62
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 103 (41.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 46 TEKKRRL--TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR 99
T+ K R+ T Q LEK F + RK +LA LGL RQ+ +WFQNRRA+
Sbjct: 6 TKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 61
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 103 (41.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 47 EKKRRLTV---DQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
E KR T QV LEK F + L R++++A L L RQ+ +WFQNRR + K
Sbjct: 34 EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 91
>UNIPROTKB|P09078 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GO:GO:0045638 EMBL:X06668 ProteinModelPortal:P09078 SMR:P09078
Uniprot:P09078
Length = 93
Score = 103 (41.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKE 104
Q LEK F+ + L R ++++ LGL RQI +WFQNRR + K +E
Sbjct: 18 QTLELEKEFQCNPYLTCKRWIEVSHALGLTERQIKIWFQNRRMKWKKRE 66
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 103 (41.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 46 TEKKRRL--TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR 99
T+ K R+ T Q LEK F + RK +LA LGL RQ+ +WFQNRRA+
Sbjct: 4 TKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 59
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 103 (41.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 46 TEKKRRL--TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR 99
T+ K R+ T Q LEK F + RK +LA LGL RQ+ +WFQNRRA+
Sbjct: 4 TKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 59
>UNIPROTKB|Q05502 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG252905 EMBL:X64711 IPI:IPI00584628
PIR:S78063 RefSeq:NP_990583.1 UniGene:Gga.3316
ProteinModelPortal:Q05502 SMR:Q05502 STRING:Q05502 GeneID:396182
KEGG:gga:396182 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W NextBio:20816236 Uniprot:Q05502
Length = 277
Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 35/122 (28%), Positives = 55/122 (45%)
Query: 51 RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
R + +Q LEK FE L P + +LA+ L L RQ+ WFQNRRA+ + + E
Sbjct: 150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQENPQA 209
Query: 111 LLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVS 170
K + D+ + + E A E + Q++ + + E+ VS+ S V
Sbjct: 210 TKKEEAEGTG-DHGDPRSEGSPSPAGGGEAEP---QDSPSAASQEDPESDVSDDSDQEVD 265
Query: 171 SE 172
E
Sbjct: 266 IE 267
>ZFIN|ZDB-GENE-980526-299 [details] [associations]
symbol:hhex "hematopoietically expressed homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0060217 "hemangioblast cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0046620
"regulation of organ growth" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0001889 "liver development" evidence=IMP] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-299 GO:GO:0005634 GO:GO:0007507 GO:GO:0009952
GO:GO:0043565 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0045603 GO:GO:0007368 GO:GO:0009953
GO:GO:0048565 GO:GO:0035162 eggNOG:NOG252905 GO:GO:0046620
GO:GO:0030878 CTD:3087 HOVERGEN:HBG055460 KO:K08024
OrthoDB:EOG4XKV7W EMBL:AF131070 IPI:IPI00485854 RefSeq:NP_571009.1
UniGene:Dr.79053 HSSP:P22808 ProteinModelPortal:Q9IAV3 SMR:Q9IAV3
STRING:Q9IAV3 GeneID:30098 KEGG:dre:30098 NextBio:20806580
Uniprot:Q9IAV3
Length = 228
Score = 119 (46.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 35/100 (35%), Positives = 51/100 (51%)
Query: 51 RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
R + DQ LEK FE L P + +LA+ L L RQ+ WFQNRRA K + L+++
Sbjct: 123 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRA--KWRRLKQENP 180
Query: 111 LLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEE 150
+A D L ++A A REL++ ++EE
Sbjct: 181 PSTGKREAEDSDTRRL---SDA-AARARELESGASTDSEE 216
>UNIPROTKB|Q6XYB7 [details] [associations]
symbol:LBX2 "Transcription factor LBX2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471053
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:P13297 HOGENOM:HOG000007247 HOVERGEN:HBG006244
KO:K09353 EMBL:AY305861 EMBL:AY203953 EMBL:BC150517 IPI:IPI00376237
IPI:IPI00550811 RefSeq:NP_001009812.1 UniGene:Hs.722114
ProteinModelPortal:Q6XYB7 SMR:Q6XYB7 IntAct:Q6XYB7
PhosphoSite:Q6XYB7 DMDM:74749508 PaxDb:Q6XYB7 PRIDE:Q6XYB7
DNASU:85474 Ensembl:ENST00000377566 Ensembl:ENST00000460508
GeneID:85474 KEGG:hsa:85474 UCSC:uc002slv.4 UCSC:uc002slw.3
CTD:85474 GeneCards:GC02M074724 HGNC:HGNC:15525 HPA:HPA044257
MIM:607164 neXtProt:NX_Q6XYB7 PharmGKB:PA30305 eggNOG:NOG235470
InParanoid:Q6XYB7 OMA:MVPRAPS GenomeRNAi:85474 NextBio:76128
ArrayExpress:Q6XYB7 Bgee:Q6XYB7 CleanEx:HS_LBX2
Genevestigator:Q6XYB7 Uniprot:Q6XYB7
Length = 198
Score = 117 (46.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 47 EKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKS--KE 104
+ + T QV LE+ F L P + LA LGL Q+ WFQNRRA+LK +E
Sbjct: 87 KSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEE 146
Query: 105 LERDYGLLKA 114
+ D L+A
Sbjct: 147 MRADVASLRA 156
>UNIPROTKB|F6Q274 [details] [associations]
symbol:F6Q274 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
OrthoDB:EOG4TTGJP EMBL:CU498958 Ensembl:ENSSSCT00000011554
OMA:CGSEDED Uniprot:F6Q274
Length = 280
Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 39 REEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRA 98
+ + + K R T Q+ LEK F L P + ++A++LGL Q+ WFQNRRA
Sbjct: 118 QRQTPKKRRKSRTFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRA 177
Query: 99 RLKSKELE 106
+LK ++LE
Sbjct: 178 KLK-RDLE 184
>UNIPROTKB|F1NXJ2 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 OMA:HEMRITL
EMBL:AADN02010005 EMBL:AADN02010006 IPI:IPI00582102
Ensembl:ENSGALT00000038776 ArrayExpress:F1NXJ2 Uniprot:F1NXJ2
Length = 258
Score = 120 (47.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 22 YGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKL-EPDRKVKLAE 80
+ RE ++++ L +E +A + ++ + DQ KALEK F+ + + DRK KLA
Sbjct: 89 FPRE-ESVLPLLTQES-NSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRK-KLAI 145
Query: 81 ELGLQPRQIAVWFQNRRARLK-SKELE 106
LGL+ Q+ +WFQNRR + + SKE E
Sbjct: 146 NLGLKESQVKIWFQNRRMKWRNSKEKE 172
>UNIPROTKB|J9P1P5 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 OMA:MVPRAPS EMBL:AAEX03010965
Ensembl:ENSCAFT00000042884 Uniprot:J9P1P5
Length = 192
Score = 116 (45.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 30/76 (39%), Positives = 37/76 (48%)
Query: 42 ASQATEKKRR-LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
A + K R T QV LE+ F L P + LA LGL Q+ WFQNRRA+L
Sbjct: 81 AGRRRRKSRTAFTAQQVLELERRFLFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKL 140
Query: 101 KS--KELERDYGLLKA 114
K +E+ D L A
Sbjct: 141 KRDVEEMRADVASLSA 156
>ZFIN|ZDB-GENE-030328-42 [details] [associations]
symbol:pnx "posterior neuron-specific homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030328-42 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HSSP:P13297 HOVERGEN:HBG066288 EMBL:BC162069
EMBL:BC162454 EMBL:AB067731 IPI:IPI00491629 RefSeq:NP_840087.1
UniGene:Dr.88552 STRING:Q8AXR6 GeneID:352939 KEGG:dre:352939
CTD:352939 eggNOG:NOG325253 HOGENOM:HOG000205901 InParanoid:Q8AXR6
OrthoDB:EOG4H72D8 NextBio:20812680 Uniprot:Q8AXR6
Length = 182
Score = 115 (45.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 42 ASQATEKKRRL----TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRR 97
AS A K +R+ T+DQ++ LE++F+ + L + +A LGL Q+ +WFQNRR
Sbjct: 60 ASAAKVKSKRIRTAFTLDQLRILERSFQSSHYLSVFERHCIASALGLSETQVKIWFQNRR 119
Query: 98 ARLKSKELE 106
+ K KEL+
Sbjct: 120 TKWK-KELD 127
>UNIPROTKB|H9L2C7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0021526 "medial motor column neuron
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02073379 EMBL:AADN02073380
Ensembl:ENSGALT00000035845 OMA:ERSWHSK Uniprot:H9L2C7
Length = 237
Score = 119 (46.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 41/103 (39%), Positives = 55/103 (53%)
Query: 18 RKQIYGREFQAMMD----CLEE-EDCRE-EASQATEKKRRLTVDQVKALE--KNFEVDNK 69
R+ G EF M D C E+ E ++ + S+A K+ R T+ K LE KN N
Sbjct: 97 RQLATGDEFYLMEDGRLVCKEDYETAKQNDDSEAGAKRPRTTIT-AKQLETLKN-AYKNS 154
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
+P R V+ L+ E GL R + VWFQNRRA K K L++D G
Sbjct: 155 PKPARHVREQLSSETGLDMRVVQVWFQNRRA--KEKRLKKDAG 195
>UNIPROTKB|F1N8D2 [details] [associations]
symbol:HESX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 IPI:IPI00575485 GeneTree:ENSGT00700000104128
EMBL:AADN02014018 Ensembl:ENSGALT00000008836
Ensembl:ENSGALT00000036259 Uniprot:F1N8D2
Length = 193
Score = 116 (45.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 9 FHEDKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRR--LTVDQVKALEKNFEV 66
FH + + +++ E E + E S ++ R T +Q++ LE F++
Sbjct: 80 FHANSNLMQEEKVLNCE--KYFSVTERLSFKRELSWYRGRRPRTAFTRNQIEVLENVFKM 137
Query: 67 DNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLD 122
++ D + +LA +L L+ +I +WFQNRRA+LK E + ++K N+ + L+
Sbjct: 138 NSYPGIDIREELARKLDLEEDRIQIWFQNRRAKLKRSHRESQFLMVKNNFTSSLLE 193
>ZFIN|ZDB-GENE-980526-131 [details] [associations]
symbol:lhx3 "LIM homeobox 3" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-980526-131 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG275246 KO:K09374 HOVERGEN:HBG006263 CTD:8022 EMBL:U34590
IPI:IPI00486105 RefSeq:NP_571283.1 UniGene:Dr.570
ProteinModelPortal:Q90421 SMR:Q90421 STRING:Q90421 GeneID:30455
KEGG:dre:30455 NextBio:20806850 Uniprot:Q90421
Length = 398
Score = 123 (48.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/103 (37%), Positives = 55/103 (53%)
Query: 17 KRKQIYGREFQAMMD----CLEE-EDCREEASQATEKKRRLTVDQVKALE--KNFEVDNK 69
KR+ G E+ M D C + E ++ + +T K+ R T+ K LE KN +N
Sbjct: 119 KRQLATGDEYYLMEDSRLVCKADYETAKQREADSTAKRPRTTIT-AKQLETLKN-AYNNS 176
Query: 70 LEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDYG 110
+P R V+ L+ E GL R + VWFQNRRA K K L++D G
Sbjct: 177 PKPARHVREQLSTETGLDMRVVQVWFQNRRA--KEKRLKKDAG 217
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 109 (43.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 34 EEEDCREEASQATEKKRR-LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVW 92
+E + + E + K+R T +Q++ LE F N L R+ ++A L L RQ+ VW
Sbjct: 25 QEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVW 84
Query: 93 FQNRRARLK 101
FQNRR + K
Sbjct: 85 FQNRRMKWK 93
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 102 (41.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERD 108
Q LEK F + L R+++++ LGL RQ+ +WFQNRR + K KE +D
Sbjct: 6 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 57
>RGD|1586210 [details] [associations]
symbol:Hoxc4 "homeo box C4" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0071837
"HMG box domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 102 (41.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
QV LEK F + L R++++A L L RQI +WFQNRR + K
Sbjct: 22 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 102 (41.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERD 108
Q LEK F + L R+++++ LGL RQ+ +WFQNRR + K KE +D
Sbjct: 26 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 77
>UNIPROTKB|P18865 [details] [associations]
symbol:Hoxc4 "Homeobox protein Hox-C4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 102 (41.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
QV LEK F + L R++++A L L RQI +WFQNRR + K
Sbjct: 22 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 102 (41.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERD 108
Q LEK F + L R+++++ LGL RQ+ +WFQNRR + K KE +D
Sbjct: 26 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD 77
>UNIPROTKB|F1N8D1 [details] [associations]
symbol:HESX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0030916 "otic vesicle
formation" evidence=IEA] [GO:0043584 "nose development"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0047485 "protein N-terminus
binding" evidence=IEA] [GO:0048853 "forebrain morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104128 OMA:PWADTCS EMBL:AADN02014018
IPI:IPI00820422 Ensembl:ENSGALT00000036260 ArrayExpress:F1N8D1
Uniprot:F1N8D1
Length = 199
Score = 116 (45.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 9 FHEDKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRR--LTVDQVKALEKNFEV 66
FH + + +++ E E + E S ++ R T +Q++ LE F++
Sbjct: 86 FHANSNLMQEEKVLNCE--KYFSVTERLSFKRELSWYRGRRPRTAFTRNQIEVLENVFKM 143
Query: 67 DNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLD 122
++ D + +LA +L L+ +I +WFQNRRA+LK E + ++K N+ + L+
Sbjct: 144 NSYPGIDIREELARKLDLEEDRIQIWFQNRRAKLKRSHRESQFLMVKNNFTSSLLE 199
>UNIPROTKB|H9L043 [details] [associations]
symbol:H9L043 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AADN02053375
Ensembl:ENSGALT00000021923 OMA:CECERRL Uniprot:H9L043
Length = 280
Score = 120 (47.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 35/106 (33%), Positives = 56/106 (52%)
Query: 36 EDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVK--LAEELGLQPRQIAVWF 93
ED ++ ++ + LT Q +A + +FEV +K P RKV+ LA E GL R + VWF
Sbjct: 95 EDSKDH-KRSKRPRTILTTQQRRAFKASFEVSSK--PCRKVRETLAAETGLTVRVVQVWF 151
Query: 94 QNRRARLKS----------KELERDYGLLKANYDALRLDYNNLQQE 129
QN+RA++K ++ E+++G D L + Y L Q+
Sbjct: 152 QNQRAKMKKIARRQQQQQQQQQEQEHGASVHGLDGLMVPYPRLPQQ 197
>UNIPROTKB|J9NYL4 [details] [associations]
symbol:LBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
CTD:10660 KO:K09353 OMA:NSEATAG EMBL:AAEX03015474
RefSeq:XP_543979.1 Ensembl:ENSCAFT00000047871 GeneID:486850
KEGG:cfa:486850 Uniprot:J9NYL4
Length = 281
Score = 120 (47.3 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 46 TEKKRR-----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
T KKRR T Q+ LEK F L P + ++A++LGL Q+ WFQNRRA+L
Sbjct: 121 TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL 180
Query: 101 KSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRE 139
K ++LE +KA+ ++ + + Q + AL AEL +
Sbjct: 181 K-RDLEE----MKADVESAKKLGPSGQMDIVAL-AELEQ 213
>UNIPROTKB|P52954 [details] [associations]
symbol:LBX1 "Transcription factor LBX1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0021920
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord association neuron specification"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048664 "neuron fate
determination" evidence=IEA] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0008285
EMBL:CH471066 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007517
GO:GO:0001947 GO:GO:0009653 GO:GO:0000976 eggNOG:NOG240187
GO:GO:0048664 EMBL:X90828 EMBL:AL135794 EMBL:BC069156 EMBL:BC136321
IPI:IPI00006058 RefSeq:NP_006553.2 UniGene:Hs.37128
ProteinModelPortal:P52954 SMR:P52954 STRING:P52954 DMDM:117949813
PRIDE:P52954 Ensembl:ENST00000370193 GeneID:10660 KEGG:hsa:10660
UCSC:uc001ksx.3 CTD:10660 GeneCards:GC10M102976 HGNC:HGNC:16960
HPA:HPA002086 MIM:604255 neXtProt:NX_P52954 PharmGKB:PA142671561
HOGENOM:HOG000007247 HOVERGEN:HBG006244 InParanoid:P52954 KO:K09353
OMA:NSEATAG OrthoDB:EOG4TTGJP GenomeRNAi:10660 NextBio:40539
ArrayExpress:P52954 Bgee:P52954 CleanEx:HS_LBX1
Genevestigator:P52954 GermOnline:ENSG00000138136 GO:GO:0021920
Uniprot:P52954
Length = 281
Score = 120 (47.3 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 46 TEKKRR-----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
T KKRR T Q+ LEK F L P + ++A++LGL Q+ WFQNRRA+L
Sbjct: 121 TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL 180
Query: 101 KSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRE 139
K ++LE +KA+ ++ + + Q + AL AEL +
Sbjct: 181 K-RDLEE----MKADVESAKKLGPSGQMDIVAL-AELEQ 213
>UNIPROTKB|D7R811 [details] [associations]
symbol:LBX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
CTD:10660 KO:K09353 OMA:NSEATAG OrthoDB:EOG4TTGJP EMBL:CU469143
EMBL:HM044216 RefSeq:NP_001193265.1 UniGene:Ssc.101871
Ensembl:ENSSSCT00000031910 GeneID:100155030 KEGG:ssc:100155030
Uniprot:D7R811
Length = 281
Score = 120 (47.3 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 46 TEKKRR-----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
T KKRR T Q+ LEK F L P + ++A++LGL Q+ WFQNRRA+L
Sbjct: 121 TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL 180
Query: 101 KSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRE 139
K ++LE +KA+ ++ + + Q + AL AEL +
Sbjct: 181 K-RDLEE----MKADVESAKKLGPSGQMDIVAL-AELEQ 213
>UNIPROTKB|E1BC20 [details] [associations]
symbol:LBX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048664 "neuron fate determination" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0008285 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001947
GO:GO:0000976 GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
KO:K09353 OMA:NSEATAG GO:GO:0021920 EMBL:DAAA02058980
IPI:IPI00685675 RefSeq:NP_001179743.1 UniGene:Bt.54498
Ensembl:ENSBTAT00000032902 GeneID:534470 KEGG:bta:534470
NextBio:20876409 Uniprot:E1BC20
Length = 282
Score = 120 (47.3 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 46 TEKKRR-----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
T KKRR T Q+ LEK F L P + ++A++LGL Q+ WFQNRRA+L
Sbjct: 121 TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL 180
Query: 101 KSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRE 139
K ++LE +KA+ ++ + + Q + AL AEL +
Sbjct: 181 K-RDLEE----MKADVESAKKLGPSGQMDIVAL-AELEQ 213
>MGI|MGI:104867 [details] [associations]
symbol:Lbx1 "ladybird homeobox homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0001947
"heart looping" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IMP] [GO:0048663 "neuron fate commitment"
evidence=IMP] [GO:0048664 "neuron fate determination"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:104867
GO:GO:0008285 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007517
GO:GO:0001947 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 OMA:NSEATAG
OrthoDB:EOG4TTGJP GO:GO:0021920 EMBL:X90829 EMBL:AB108497
EMBL:BC119177 EMBL:BC120586 EMBL:AK144562 IPI:IPI00132589
RefSeq:NP_034821.2 UniGene:Mm.116815 ProteinModelPortal:P52955
SMR:P52955 IntAct:P52955 STRING:P52955 PRIDE:P52955
Ensembl:ENSMUST00000099401 GeneID:16814 KEGG:mmu:16814
UCSC:uc008hqv.1 InParanoid:P52955 NextBio:290692 Bgee:P52955
CleanEx:MM_LBX1 Genevestigator:P52955 GermOnline:ENSMUSG00000025216
Uniprot:P52955
Length = 282
Score = 120 (47.3 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 46 TEKKRR-----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
T KKRR T Q+ LEK F L P + ++A++LGL Q+ WFQNRRA+L
Sbjct: 121 TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL 180
Query: 101 KSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRE 139
K ++LE +KA+ ++ + + Q + AL AEL +
Sbjct: 181 K-RDLEE----MKADVESAKKLGPSGQMDIVAL-AELEQ 213
>ZFIN|ZDB-GENE-000128-11 [details] [associations]
symbol:dbx1b "developing brain homeobox 1b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0021515 "cell
differentiation in spinal cord" evidence=IGI] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000128-11 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 HOGENOM:HOG000112172
HOVERGEN:HBG005454 GO:GO:0021515 EMBL:AF030285 IPI:IPI00508605
RefSeq:NP_571253.1 UniGene:Dr.81310 HSSP:P23441
ProteinModelPortal:Q9PTU0 PRIDE:Q9PTU0 GeneID:30416 KEGG:dre:30416
CTD:30416 eggNOG:NOG257690 InParanoid:Q9PTU0 OrthoDB:EOG4T4CW6
NextBio:20806822 ArrayExpress:Q9PTU0 Uniprot:Q9PTU0
Length = 322
Score = 121 (47.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 45/132 (34%), Positives = 71/132 (53%)
Query: 56 QVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQNRRARLK-SKELER-DYGLL 112
Q KALEK F+ + +PDRK KLA +LGL+ Q+ +WFQNRR + + SKE E G
Sbjct: 190 QRKALEKMFQKQKYISKPDRK-KLATKLGLKDSQVKIWFQNRRMKWRNSKERELLSSGGC 248
Query: 113 KANYDALRLDYN-NLQQENEALTAE--LREL-KAKLCQE--NEETSHAVEAEAPVSEQSK 166
+ +++ N +L + E LRE +A CQ + E + + ++P S SK
Sbjct: 249 REQTLPTKMNPNPDLSDVGKRFEHEAVLRESPRAPFCQSRGDHEFNADLHFKSP-SISSK 307
Query: 167 NHVSSENANAQL 178
+ SE+ + ++
Sbjct: 308 HSDFSESEDEEI 319
>RGD|1564197 [details] [associations]
symbol:Lbx1 "ladybird homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IEA;ISO] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA;ISO] [GO:0048663 "neuron
fate commitment" evidence=ISO] [GO:0048664 "neuron fate
determination" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564197 GO:GO:0008285 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007517 GO:GO:0001947 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 OrthoDB:EOG4TTGJP
GO:GO:0021920 EMBL:AB197923 IPI:IPI00392001 RefSeq:NP_001040573.1
UniGene:Rn.194904 ProteinModelPortal:Q1XID0 PRIDE:Q1XID0
Ensembl:ENSRNOT00000021748 GeneID:499362 KEGG:rno:499362
NextBio:702666 Genevestigator:Q1XID0 Uniprot:Q1XID0
Length = 285
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 46 TEKKRR-----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
T KKRR T Q+ LEK F L P + ++A++LGL Q+ WFQNRRA+L
Sbjct: 121 TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL 180
Query: 101 KSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRE 139
K ++LE +KA+ ++ + + Q + AL AEL +
Sbjct: 181 K-RDLEE----MKADVESAKKLGPSGQMDIVAL-AELEQ 213
>MGI|MGI:94867 [details] [associations]
symbol:Dbx1 "developing brain homeobox 1" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0021521 "ventral spinal cord interneuron specification"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:94867
GO:GO:0005634 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104097 HOGENOM:HOG000112172
HOVERGEN:HBG005454 eggNOG:NOG257690 OrthoDB:EOG4T4CW6 CTD:120237
OMA:YHASPDP GO:GO:0021521 EMBL:S75837 EMBL:BC082541 EMBL:AK134473
IPI:IPI00132583 PIR:E41606 RefSeq:NP_001005232.1 UniGene:Mm.307176
ProteinModelPortal:P52950 SMR:P52950 STRING:P52950
PhosphoSite:P52950 PRIDE:P52950 Ensembl:ENSMUST00000032717
GeneID:13172 KEGG:mmu:13172 UCSC:uc009hbn.1 InParanoid:P52950
NextBio:283272 Bgee:P52950 CleanEx:MM_DBX1 Genevestigator:P52950
GermOnline:ENSMUSG00000030507 Uniprot:P52950
Length = 335
Score = 121 (47.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 56 QVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQNRRARLK-SKELE 106
Q KALEK F+ + +PDRK KLA +LGL+ Q+ +WFQNRR + + SKE E
Sbjct: 192 QRKALEKTFQKQKYISKPDRK-KLASKLGLKDSQVKIWFQNRRMKWRNSKERE 243
>RGD|1308896 [details] [associations]
symbol:Dbx1 "developing brain homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0021521 "ventral spinal cord interneuron
specification" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1308896 GO:GO:0005634 GO:GO:0003700 GO:GO:0006357
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 HOGENOM:HOG000112172
HOVERGEN:HBG005454 HSSP:P23441 eggNOG:NOG257690 OrthoDB:EOG4T4CW6
CTD:120237 OMA:YHASPDP GO:GO:0021521 EMBL:AB197138 IPI:IPI00203263
RefSeq:NP_001009644.1 UniGene:Rn.104881 ProteinModelPortal:Q5NSW5
STRING:Q5NSW5 PRIDE:Q5NSW5 Ensembl:ENSRNOT00000019739 GeneID:292934
KEGG:rno:292934 UCSC:RGD:1308896 InParanoid:Q5NSW5 NextBio:635079
Genevestigator:Q5NSW5 Uniprot:Q5NSW5
Length = 335
Score = 121 (47.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 56 QVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQNRRARLK-SKELE 106
Q KALEK F+ + +PDRK KLA +LGL+ Q+ +WFQNRR + + SKE E
Sbjct: 192 QRKALEKTFQKQKYISKPDRK-KLASKLGLKDSQVKIWFQNRRMKWRNSKERE 243
>UNIPROTKB|F1N4F7 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:DAAA02032139 IPI:IPI00694069 Ensembl:ENSBTAT00000038767
Uniprot:F1N4F7
Length = 294
Score = 120 (47.3 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 52 LTVDQVKALEKNFEVDNKLEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDY 109
LT Q +A + +FEV +K P RKV+ LA E GL R + VWFQN+RA++K +L R +
Sbjct: 118 LTTQQRRAFKASFEVSSK--PCRKVRETLAAETGLSVRVVQVWFQNQRAKMK--KLARRH 173
Query: 110 GLLKANYDALRLDYNNLQQENEALTAELREL 140
+ ++ RL L E + A L
Sbjct: 174 QQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 204
>UNIPROTKB|F1RS26 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:CU062602 Ensembl:ENSSSCT00000006164 Uniprot:F1RS26
Length = 294
Score = 120 (47.3 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 52 LTVDQVKALEKNFEVDNKLEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDY 109
LT Q +A + +FEV +K P RKV+ LA E GL R + VWFQN+RA++K +L R +
Sbjct: 118 LTTQQRRAFKASFEVSSK--PCRKVRETLAAETGLSVRVVQVWFQNQRAKMK--KLARRH 173
Query: 110 GLLKANYDALRLDYNNLQQENEALTAELREL 140
+ ++ RL L E + A L
Sbjct: 174 QQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 204
>UNIPROTKB|H9KV25 [details] [associations]
symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC004534 HGNC:HGNC:22448
ProteinModelPortal:H9KV25 SMR:H9KV25 Ensembl:ENST00000223140
Bgee:H9KV25 Uniprot:H9KV25
Length = 574
Score = 124 (48.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 40 EEASQATEKKRRL-TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRA 98
E Q +K R L DQ++ LEK F+ D+ + D++ ++A+ +G+ P++I VWFQNRRA
Sbjct: 181 EVTCQIRKKTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRA 240
Query: 99 RLKSKE 104
+ + E
Sbjct: 241 KWRKME 246
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 101 (40.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSK 103
Q+ ALEK FE L + +LA LG+ Q+ VWFQNRR + + +
Sbjct: 34 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKR 81
>UNIPROTKB|Q02814 [details] [associations]
symbol:CHOX-CAD2 "Homeobox protein CHOX-CAD2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG291290 OrthoDB:EOG42FSK7
EMBL:L06621 IPI:IPI00576916 PIR:PC1228 ProteinModelPortal:Q02814
SMR:Q02814 InParanoid:Q02814 Uniprot:Q02814
Length = 60
Score = 101 (40.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 47 EKKRRLTVDQVKA-LEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR 99
EK R + D + LEK F + + RK +LA LGL RQ+ WFQNRRA+
Sbjct: 2 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKSWFQNRRAK 55
>RGD|1588601 [details] [associations]
symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 101 (40.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 53 TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLL 112
T Q+ LEK F + L R+V++A L L RQI +WFQNRR +K K+ ++ G+L
Sbjct: 19 TSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRR--MKYKKDQKAKGIL 76
>UNIPROTKB|P18867 [details] [associations]
symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 101 (40.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 53 TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLL 112
T Q+ LEK F + L R+V++A L L RQI +WFQNRR +K K+ ++ G+L
Sbjct: 19 TSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRR--MKYKKDQKAKGIL 76
>UNIPROTKB|Q9UBX0 [details] [associations]
symbol:HESX1 "Homeobox expressed in ES cells 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0030916 "otic vesicle formation" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048853
"forebrain morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007420
"brain development" evidence=TAS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045892
GO:GO:0007420 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:8820 eggNOG:NOG326168 HOGENOM:HOG000112889 HOVERGEN:HBG004226
KO:K09354 GO:GO:0030916 GO:GO:0043584 GO:GO:0048853 Orphanet:95494
EMBL:AF059734 EMBL:U82811 EMBL:U65437 EMBL:BC069515 EMBL:BC093979
EMBL:BC112089 IPI:IPI00002815 RefSeq:NP_003856.1 UniGene:Hs.171980
PDB:2K40 PDBsum:2K40 ProteinModelPortal:Q9UBX0 SMR:Q9UBX0
STRING:Q9UBX0 DMDM:12230168 PRIDE:Q9UBX0 DNASU:8820
Ensembl:ENST00000295934 GeneID:8820 KEGG:hsa:8820 UCSC:uc003din.4
GeneCards:GC03M057207 HGNC:HGNC:4877 HPA:HPA024187 MIM:182230
MIM:262600 MIM:601802 neXtProt:NX_Q9UBX0 Orphanet:226307
Orphanet:95496 Orphanet:3157 PharmGKB:PA29255 InParanoid:Q9UBX0
OMA:PWADTCS OrthoDB:EOG46T32J PhylomeDB:Q9UBX0 ChiTaRS:HESX1
EvolutionaryTrace:Q9UBX0 GenomeRNAi:8820 NextBio:33086
ArrayExpress:Q9UBX0 Bgee:Q9UBX0 CleanEx:HS_HESX1
Genevestigator:Q9UBX0 GermOnline:ENSG00000163666 Uniprot:Q9UBX0
Length = 185
Score = 114 (45.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 25 EFQAMMDCLEEEDCREEASQATEKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEEL 82
+++ E + E S ++ R T +Q++ LE F V+ D + LA++L
Sbjct: 86 KYENYFSASERLSLKRELSWYRGRRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKL 145
Query: 83 GLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLD 122
L+ +I +WFQNRRA+LK E + + K N++ L+
Sbjct: 146 NLEEDRIQIWFQNRRAKLKRSHRESQFLMAKKNFNTNLLE 185
>UNIPROTKB|E1B7H9 [details] [associations]
symbol:LOC539422 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0055123
"digestive system development" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007267 "cell-cell signaling" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0007267
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048536 GO:GO:0000976 GO:GO:0030178
GeneTree:ENSGT00700000104097 OMA:ARPFHSH GO:GO:0055123
GO:GO:0030855 EMBL:DAAA02024075 IPI:IPI00713277
Ensembl:ENSBTAT00000005865 Uniprot:E1B7H9
Length = 249
Score = 118 (46.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 49/137 (35%), Positives = 66/137 (48%)
Query: 33 LEEEDCREEASQATEKKRRLTVD---QVKALEKNFEVDNKLE-PDRKVKLAEELGLQPRQ 88
LE E ++A + +R TV Q+ LEK FE L PDR + LAE LGL Q
Sbjct: 122 LEAPGAGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDR-IDLAESLGLSQLQ 180
Query: 89 IAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQEN 148
+ W+QNRR + K L+ GL R N++ +E LT + R AK E
Sbjct: 181 VKTWYQNRRMKWKKIVLQGG-GLESPTKPKGRPKKNSIPT-SEQLTEQER---AK---EA 232
Query: 149 EETSHAVEAEAPVSEQS 165
E+T VEA S++S
Sbjct: 233 EKT---VEAPGEASDRS 246
>UNIPROTKB|J9NU69 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:NRMEGMM EMBL:AAEX03006872
EMBL:AAEX03006873 Ensembl:ENSCAFT00000044276 Uniprot:J9NU69
Length = 327
Score = 120 (47.3 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 52 LTVDQVKALEKNFEVDNKLEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDY 109
LT Q +A + +FEV +K P RKV+ LA E GL R + VWFQN+RA++K +L R +
Sbjct: 158 LTTQQRRAFKASFEVSSK--PCRKVRETLAAETGLSVRVVQVWFQNQRAKMK--KLARRH 213
Query: 110 GLLKANYDALRLDYNNLQQENEALTAELREL 140
+ ++ RL L E + A L
Sbjct: 214 QQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 244
>UNIPROTKB|Q2PYN8 [details] [associations]
symbol:lbx1 "Transcription factor LBX1" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0051450 "myoblast proliferation" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 HSSP:P06601 GO:GO:0051450
CTD:10660 HOVERGEN:HBG006244 KO:K09353 EMBL:DQ294722
RefSeq:NP_001089192.1 UniGene:Xl.55973 ProteinModelPortal:Q2PYN8
GeneID:734237 KEGG:xla:734237 Xenbase:XB-GENE-6251676
Uniprot:Q2PYN8
Length = 267
Score = 118 (46.6 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 46 TEKKRR-----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
T KKRR T Q+ LEK F L P + ++A++LGL Q+ WFQNRRA+L
Sbjct: 123 TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL 182
Query: 101 KSKELE 106
K ++LE
Sbjct: 183 K-RDLE 187
>TAIR|locus:2167230 [details] [associations]
symbol:HDG9 "AT5G17320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AB005238 ProtClustDB:CLSN2679643
IPI:IPI00529269 RefSeq:NP_197234.1 UniGene:At.54882
ProteinModelPortal:Q9FFI0 SMR:Q9FFI0 EnsemblPlants:AT5G17320.1
GeneID:831598 KEGG:ath:AT5G17320 TAIR:At5g17320 eggNOG:KOG0493
InParanoid:Q9FFI0 PhylomeDB:Q9FFI0 Genevestigator:Q9FFI0
Uniprot:Q9FFI0
Length = 718
Score = 124 (48.7 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 40/114 (35%), Positives = 58/114 (50%)
Query: 35 EEDCREEASQATEKK--RRLTVDQVKALEKNF-EVDNKLEPDRKVKLAEELGLQPRQIAV 91
E D + EKK R T +Q+ LE F E + E R++ L EEL L+P+QI
Sbjct: 14 ENDVDANTNNRHEKKGYHRHTNEQIHRLETYFKECPHPDEFQRRL-LGEELNLKPKQIKF 72
Query: 92 WFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLC 145
WFQN+R + KS E KA+ ALR + +++ENE++ L + C
Sbjct: 73 WFQNKRTQAKSHN-E------KADNAALRAENIKIRRENESMEDALNNVVCPPC 119
>UNIPROTKB|E2R1U3 [details] [associations]
symbol:HESX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048853
"forebrain morphogenesis" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0030916 "otic vesicle formation"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030916 GO:GO:0043584 GeneTree:ENSGT00700000104128
GO:GO:0048853 OMA:PWADTCS EMBL:AAEX03012167
Ensembl:ENSCAFT00000012770 Uniprot:E2R1U3
Length = 185
Score = 113 (44.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 25 EFQAMMDCLEEEDCREEASQATEKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEEL 82
+++ E + E S ++ R T +Q++ LE F V+ D + LA +L
Sbjct: 86 KYENYFSASERLSLKRELSWYRGRRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLARKL 145
Query: 83 GLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLD 122
L+ +I +WFQNRRA+LK E + + K N+++ L+
Sbjct: 146 NLEEDRIQIWFQNRRAKLKRSHRESQFLMAKKNFNSNLLE 185
>WB|WBGene00002988 [details] [associations]
symbol:lim-6 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030421 "defecation"
evidence=IMP] [GO:0060756 "foraging behavior" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0009449 "gamma-aminobutyric acid
biosynthetic process" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0061038 "uterus morphogenesis"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007409 GO:GO:0010468 GO:GO:0030421
GeneTree:ENSGT00700000104050 GO:GO:0009449 eggNOG:NOG243427
GO:GO:0061038 EMBL:FO080324 GeneID:180459 KEGG:cel:CELE_K03E6.1
CTD:180459 GO:GO:0060756 RefSeq:NP_001256980.1
ProteinModelPortal:Q21192 SMR:Q21192 PaxDb:Q21192
EnsemblMetazoa:K03E6.1b UCSC:K03E6.1 WormBase:K03E6.1b
HOGENOM:HOG000018451 InParanoid:Q21192 OMA:HGNIYCE NextBio:909480
ArrayExpress:Q21192 Uniprot:Q21192
Length = 316
Score = 119 (46.9 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 34/85 (40%), Positives = 46/85 (54%)
Query: 31 DCLEEEDCREEASQATEKKRR--LTVDQVKALEKNFEVDNKLEPDRKVK--LAEELGLQP 86
D L EE R E + T K+ R L Q + + FE +K P RKV+ LA E GL
Sbjct: 170 DPLMEEVVRSEIHRKTPKRPRTILNAQQRRQFKTAFERSSK--PSRKVREQLANETGLSV 227
Query: 87 RQIAVWFQNRRARLKS-KELERDYG 110
R + VWFQN+RA++K + + D G
Sbjct: 228 RVVQVWFQNQRAKIKKLNKKDSDSG 252
>FB|FBgn0004054 [details] [associations]
symbol:zen2 "zerknullt-related" species:7227 "Drosophila
melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007450
"dorsal/ventral pattern formation, imaginal disc" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE014297 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311 EMBL:AE001572
eggNOG:NOG325574 ChiTaRS:br GeneTree:ENSGT00700000104161
EMBL:X68348 PIR:B43697 RefSeq:NP_476794.1 UniGene:Dm.27226
ProteinModelPortal:P09090 SMR:P09090 EnsemblMetazoa:FBtr0081671
GeneID:40827 KEGG:dme:Dmel_CG1048 CTD:40827 FlyBase:FBgn0004054
InParanoid:P09090 OMA:CWDSNSS OrthoDB:EOG4KD53G PhylomeDB:P09090
GenomeRNAi:40827 NextBio:820795 Bgee:P09090 GermOnline:CG1048
Uniprot:P09090
Length = 252
Score = 117 (46.2 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 35/142 (24%), Positives = 66/142 (46%)
Query: 29 MMDCLE--EEDCREEASQATEKKRRLTVD----QVKALEKNFEVDNKLEPDRKVKLAEEL 82
M C+E E ++++EK +R Q+ LE+ F ++ L R++++++ L
Sbjct: 21 MYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRL 80
Query: 83 GLQPRQIAVWFQNRRARLK-SKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELK 141
L RQ+ +WFQNRR +LK S + G L + +LQ++++ + LR
Sbjct: 81 ALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYAN 140
Query: 142 AKL-CQENEETSHAVEAEAPVS 162
+ + H V E ++
Sbjct: 141 TNVETAPLRQVDHGVLEEGQIT 162
>UNIPROTKB|H0YIA6 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0005730
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080 InterPro:IPR021918
Pfam:PF12045 HGNC:HGNC:5101 ChiTaRS:HOXA11 Ensembl:ENST00000517402
Uniprot:H0YIA6
Length = 283
Score = 118 (46.6 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 35 EEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
E+ + Q T KKR T Q++ LE+ F + +++++L+ L L RQ+ +WF
Sbjct: 200 EDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 259
Query: 94 QNRRARLKSKELERD 108
QNRR +K K++ RD
Sbjct: 260 QNRR--MKEKKINRD 272
>UNIPROTKB|Q0VCS4 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG321520 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
OrthoDB:EOG43TZVT EMBL:BC120030 IPI:IPI00689409
RefSeq:NP_001069322.1 UniGene:Bt.111374 ProteinModelPortal:Q0VCS4
SMR:Q0VCS4 PRIDE:Q0VCS4 GeneID:524150 KEGG:bta:524150 CTD:3199
InParanoid:Q0VCS4 NextBio:20873901 Uniprot:Q0VCS4
Length = 372
Score = 120 (47.3 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 42/150 (28%), Positives = 70/150 (46%)
Query: 32 CLEEEDCREEASQATEKKRRL----TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPR 87
CL ++ E A + RRL T Q+ LEK F + L R+V++A L L R
Sbjct: 122 CLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTER 181
Query: 88 QIAVWFQNRRARLKS----KELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAK 143
Q+ VWFQNRR + K KE + G K+ D+ ++D + +E ++L + +
Sbjct: 182 QVKVWFQNRRMKHKRQTQCKENQNSEGKFKSLEDSEKVDED---EEEKSLFEQALSVSGA 238
Query: 144 LCQENEETSHAVEAEAPVSEQSKNHVSSEN 173
L E + + A +Q+ N + ++
Sbjct: 239 LL---EREGYTFQQNALSQQQASNGYNGDS 265
>MGI|MGI:1100513 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002930 "trabecular meshwork development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008219 "cell death" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0021587 "cerebellum morphogenesis"
evidence=IMP] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0030199 "collagen fibril organization"
evidence=IMP] [GO:0030326 "embryonic limb morphogenesis"
evidence=NAS] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0035108 "limb morphogenesis" evidence=IMP] [GO:0035265 "organ
growth" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AF078166
MGI:MGI:1100513 GO:GO:0005634 GO:GO:0001764 GO:GO:0046872
GO:GO:0008283 GO:GO:0008219 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0030326 GO:GO:0030901 GO:GO:0035265 EMBL:CH466542
GO:GO:0009953 GO:GO:0021954 GeneTree:ENSGT00700000104050
GO:GO:0021587 HOGENOM:HOG000231629 eggNOG:NOG243427
HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN CTD:4010
EMBL:AL929212 EMBL:BC119169 EMBL:BC125469 IPI:IPI00132794
RefSeq:NP_034855.2 UniGene:Mm.39825 ProteinModelPortal:O88609
SMR:O88609 STRING:O88609 PhosphoSite:O88609 PRIDE:O88609
Ensembl:ENSMUST00000041730 GeneID:16917 KEGG:mmu:16917
InParanoid:Q0VEN6 OMA:NRMEGMM NextBio:290964 Bgee:O88609
CleanEx:MM_LMX1B Genevestigator:O88609
GermOnline:ENSMUSG00000038765 GO:GO:0002930 Uniprot:O88609
Length = 372
Score = 120 (47.3 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 52 LTVDQVKALEKNFEVDNKLEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDY 109
LT Q +A + +FEV +K P RKV+ LA E GL R + VWFQN+RA++K +L R +
Sbjct: 203 LTTQQRRAFKASFEVSSK--PCRKVRETLAAETGLSVRVVQVWFQNQRAKMK--KLARRH 258
Query: 110 GLLKANYDALRLDYNNLQQENEALTAELREL 140
+ ++ RL L E + A L
Sbjct: 259 QQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 289
>UNIPROTKB|G3V877 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002930 "trabecular meshwork development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021587 "cerebellum morphogenesis" evidence=IEA]
[GO:0021954 "central nervous system neuron development"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0035265 "organ
growth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:620843 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CH474001 OMA:NRMEGMM
UniGene:Rn.92364 Ensembl:ENSRNOT00000022953 Uniprot:G3V877
Length = 372
Score = 120 (47.3 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 52 LTVDQVKALEKNFEVDNKLEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDY 109
LT Q +A + +FEV +K P RKV+ LA E GL R + VWFQN+RA++K +L R +
Sbjct: 203 LTTQQRRAFKASFEVSSK--PCRKVRETLAAETGLSVRVVQVWFQNQRAKMK--KLARRH 258
Query: 110 GLLKANYDALRLDYNNLQQENEALTAELREL 140
+ ++ RL L E + A L
Sbjct: 259 QQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 289
>MGI|MGI:96175 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10090 "Mus musculus"
[GO:0001974 "blood vessel remodeling" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0010159 "specification of organ
position" evidence=IGI] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IGI;IMP] [GO:0030878 "thyroid gland
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=IGI;IMP] [GO:0048645 "organ formation" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=IGI]
[GO:0051216 "cartilage development" evidence=IGI] [GO:0060017
"parathyroid gland development" evidence=IGI] [GO:0071837 "HMG box
domain binding" evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96175
GO:GO:0005634 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615 EMBL:Y11717
EMBL:BC096612 EMBL:U56399 EMBL:K02591 IPI:IPI00113737 PIR:I49746
RefSeq:NP_034582.1 UniGene:Mm.159945 UniGene:Mm.483277
ProteinModelPortal:P02831 SMR:P02831 STRING:P02831
PhosphoSite:P02831 PRIDE:P02831 Ensembl:ENSMUST00000114434
GeneID:15400 KEGG:mmu:15400 UCSC:uc009bya.2 InParanoid:P02831
NextBio:288094 Bgee:P02831 CleanEx:MM_HOXA3 Genevestigator:P02831
GermOnline:ENSMUSG00000059723 Uniprot:P02831
Length = 443
Score = 121 (47.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 36/117 (30%), Positives = 60/117 (51%)
Query: 1 MGSETFDHFHEDKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRRL--TVDQVK 58
+G + F E + +TK+K ++ C + + QA+ K+ R T Q+
Sbjct: 152 VGKQIFPWMKESRQNTKQKTSGSSSGES---CAGD---KSPPGQASSKRARTAYTSAQLV 205
Query: 59 ALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKAN 115
LEK F + L R+V++A L L RQI +WFQNRR +K K+ ++ G+L ++
Sbjct: 206 ELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRR--MKYKKDQKGKGMLTSS 260
>RGD|1561431 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0001974 "blood vessel
remodeling" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0010159 "specification of organ
position" evidence=ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=ISO] [GO:0030878 "thyroid gland
development" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=ISO] [GO:0048645 "organ formation" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0051216 "cartilage development" evidence=ISO] [GO:0060017
"parathyroid gland development" evidence=ISO] [GO:0071837 "HMG box
domain binding" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1561431 GO:GO:0005634
GO:GO:0009952 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001974 GO:GO:0051216 GO:GO:0048538
GO:GO:0048645 GO:GO:0048704 GO:GO:0010159 GO:GO:0060017
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293 CTD:3200
GO:GO:0021615 EMBL:CH474011 EMBL:AC122669 IPI:IPI00187912
RefSeq:XP_001058923.1 RefSeq:XP_003749795.1 RefSeq:XP_003752226.1
Ensembl:ENSRNOT00000008447 GeneID:100911474 GeneID:500125
KEGG:rno:100911474 KEGG:rno:500125 UCSC:RGD:1561431 NextBio:705172
Uniprot:D3ZM81
Length = 444
Score = 121 (47.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 36/117 (30%), Positives = 60/117 (51%)
Query: 1 MGSETFDHFHEDKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRRL--TVDQVK 58
+G + F E + +TK+K ++ C + + QA+ K+ R T Q+
Sbjct: 152 VGKQIFPWMKESRQNTKQKTSGSSSGES---CAGD---KSPPGQASSKRARTAYTSAQLV 205
Query: 59 ALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKAN 115
LEK F + L R+V++A L L RQI +WFQNRR +K K+ ++ G+L ++
Sbjct: 206 ELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRR--MKYKKDQKGKGMLTSS 260
>DICTYBASE|DDB_G0284293 [details] [associations]
symbol:hbx10 "putative homeobox transcription factor"
species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 dictyBase:DDB_G0284293 GO:GO:0007275 GO:GO:0005634
GenomeReviews:CM000153_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AAFI02000064 eggNOG:COG5576
RefSeq:XP_638704.1 HSSP:P20263 ProteinModelPortal:Q54PU1
EnsemblProtists:DDB0220476 GeneID:8624535 KEGG:ddi:DDB_G0284293
InParanoid:Q54PU1 OMA:DNIVPSI Uniprot:Q54PU1
Length = 638
Score = 123 (48.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 45 ATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
A +KKR R + +Q+ LE+ FE D +V+LA +LG+ R++ +WFQN+RA++K
Sbjct: 300 ANKKKRQRTSPEQLAILEQIFETDKMPSQQIRVRLANQLGMSSRRVQIWFQNKRAKVK 357
>UNIPROTKB|O60663 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001701 "in utero embryonic development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0001701
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0009953 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
CTD:4010 EMBL:AF057135 EMBL:AF059575 EMBL:AF059572 EMBL:AF059573
EMBL:AF059574 EMBL:AL161908 EMBL:AL161731 EMBL:BC069601
EMBL:BC112120 EMBL:BC113491 IPI:IPI00030989 IPI:IPI00220363
RefSeq:NP_001167618.1 RefSeq:NP_002307.2 UniGene:Hs.129133
ProteinModelPortal:O60663 SMR:O60663 IntAct:O60663 STRING:O60663
PhosphoSite:O60663 PaxDb:O60663 PRIDE:O60663 DNASU:4010
Ensembl:ENST00000373474 Ensembl:ENST00000425646 GeneID:4010
KEGG:hsa:4010 UCSC:uc004bqj.3 GeneCards:GC09P129376 HGNC:HGNC:6654
MIM:161200 MIM:602575 neXtProt:NX_O60663 Orphanet:2614
PharmGKB:PA30417 InParanoid:O60663 PhylomeDB:O60663 GenomeRNAi:4010
NextBio:15732 ArrayExpress:O60663 Bgee:O60663 CleanEx:HS_LMX1B
Genevestigator:O60663 GermOnline:ENSG00000136944 Uniprot:O60663
Length = 379
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 52 LTVDQVKALEKNFEVDNKLEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDY 109
LT Q +A + +FEV +K P RKV+ LA E GL R + VWFQN+RA++K +L R +
Sbjct: 203 LTTQQRRAFKASFEVSSK--PCRKVRETLAAETGLSVRVVQVWFQNQRAKMK--KLARRH 258
Query: 110 GLLKANYDALRLDYNNLQQENEALTAELREL 140
+ ++ RL L E + A L
Sbjct: 259 QQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 289
>UNIPROTKB|Q05917 [details] [associations]
symbol:EN2 "Homeobox protein engrailed-2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030175 "filopodium" evidence=IDA] [GO:0030027 "lamellipodium"
evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0045727 "positive regulation of translation" evidence=IDA]
[GO:0042327 "positive regulation of phosphorylation" evidence=IDA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0003700 GO:GO:0030027
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030175 GO:GO:0030426 GO:GO:0045727 GO:GO:0000976
GO:GO:0042327 PROSITE:PS00033 HOVERGEN:HBG005975 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 KO:K09319 EMBL:L12696 EMBL:L12697
IPI:IPI00579837 PIR:F48423 RefSeq:NP_001254648.1 UniGene:Gga.56328
GeneID:100859435 KEGG:gga:100859435 CTD:2020 Uniprot:Q05917
Length = 289
Score = 118 (46.6 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 47 EKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+K+ R T +Q++ L+ F+ + L R+ LA+ELGL QI +WFQN+RA++K
Sbjct: 200 DKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKRAKIK 256
>UNIPROTKB|E2R395 [details] [associations]
symbol:NKX6-3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
CTD:157848 KO:K09351 RefSeq:XP_849158.1 Ensembl:ENSCAFT00000009208
GeneID:607413 KEGG:cfa:607413 NextBio:20893140 Uniprot:E2R395
Length = 262
Score = 117 (46.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 23 GREFQAMMDCLEEEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEE 81
G++++A C + D ++ + R T Q+ ALEK FE L + +LA
Sbjct: 116 GQDWRAGRQCSDTPDPLSDSIHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYS 175
Query: 82 LGLQPRQIAVWFQNRRARLKSK 103
LG+ Q+ VWFQNRR + + K
Sbjct: 176 LGMTESQVKVWFQNRRTKWRKK 197
>UNIPROTKB|F8VYP0 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
IPI:IPI00220363 RefSeq:NP_002307.2 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 GenomeRNAi:4010
NextBio:15732 ProteinModelPortal:F8VYP0 SMR:F8VYP0 PRIDE:F8VYP0
Ensembl:ENST00000526117 UCSC:uc004bqi.3 ArrayExpress:F8VYP0
Bgee:F8VYP0 Uniprot:F8VYP0
Length = 395
Score = 120 (47.3 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 52 LTVDQVKALEKNFEVDNKLEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDY 109
LT Q +A + +FEV +K P RKV+ LA E GL R + VWFQN+RA++K +L R +
Sbjct: 226 LTTQQRRAFKASFEVSSK--PCRKVRETLAAETGLSVRVVQVWFQNQRAKMK--KLARRH 281
Query: 110 GLLKANYDALRLDYNNLQQENEALTAELREL 140
+ ++ RL L E + A L
Sbjct: 282 QQQQEQQNSQRLGQEVLSSRMEGMMASYTPL 312
>UNIPROTKB|F1NHF8 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
IPI:IPI00819450 Ensembl:ENSGALT00000039481 Uniprot:F1NHF8
Length = 60
Score = 99 (39.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 47 EKKRRLTVDQVKA-LEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR 99
EK R + D + LEK F + + RK +LA L L RQ+ +WFQNRRA+
Sbjct: 2 EKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAK 55
>UNIPROTKB|P14838 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
Uniprot:P14838
Length = 82
Score = 99 (39.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKA 114
Q LEK F + L R++++A L L RQI +WFQNRR + K + L A
Sbjct: 18 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLASA 76
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 99 (39.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 45 ATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSK 103
A ++ T Q LEK F + L R++++A L L RQI +WFQNRR + K +
Sbjct: 7 ARRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKE 65
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 99 (39.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 29/93 (31%), Positives = 43/93 (46%)
Query: 18 RKQIYGREFQAMMDCLEEEDCREEASQATEKKRR--LTVDQVKALEKNFEVDNKLEPDRK 75
R + G FQ D E A K+ R + Q+ LE FE ++ + +
Sbjct: 8 RYRYLGHRFQGN-DTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAER 66
Query: 76 VKLAEELGLQPRQIAVWFQNRRARLKSKELERD 108
+LA L L Q+ VWFQNRR + K ++LE +
Sbjct: 67 KQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEE 99
>UNIPROTKB|E1B732 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030331 "estrogen receptor binding" evidence=ISS]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=ISS] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0010942 "positive regulation of
cell death" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0043491
"protein kinase B signaling cascade" evidence=ISS] [GO:0004882
"androgen receptor activity" evidence=ISS] [GO:0071383 "cellular
response to steroid hormone stimulus" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:0030521 "androgen receptor signaling
pathway" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0043621 "protein self-association" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:0051781 "positive regulation of cell
division" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
"negative regulation of cell proliferation" evidence=ISS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
gland development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060664 "epithelial cell proliferation involved
in salivary gland morphogenesis" evidence=ISS] [GO:0060442
"branching involved in prostate gland morphogenesis" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0097162 "MADS box domain binding" evidence=IEA] [GO:0071850
"mitotic cell cycle arrest" evidence=IEA] [GO:0071456 "cellular
response to hypoxia" evidence=IEA] [GO:0071356 "cellular response
to tumor necrosis factor" evidence=IEA] [GO:0071347 "cellular
response to interleukin-1" evidence=IEA] [GO:0060037 "pharyngeal
system development" evidence=IEA] [GO:0045930 "negative regulation
of mitotic cell cycle" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0035907 "dorsal aorta
development" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008584
"male gonad development" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0000983 "RNA polymerase
II core promoter sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 KO:K09348 GO:GO:0071899 CTD:4824
OMA:TEPERHL GO:GO:0035907 GO:GO:2000836 EMBL:DAAA02023594
IPI:IPI00700831 RefSeq:NP_001178084.1 UniGene:Bt.87691 PRIDE:E1B732
Ensembl:ENSBTAT00000001615 GeneID:782252 KEGG:bta:782252
NextBio:20925348 Uniprot:E1B732
Length = 243
Score = 116 (45.9 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 31/97 (31%), Positives = 45/97 (46%)
Query: 23 GREFQA-MMDCLEEEDCREEASQAT---EKKRRLTVD--QVKALEKNFEVDNKLEPDRKV 76
GR + ++DC + AT +K+ R QV LE+ F L +
Sbjct: 105 GRHLETYLLDCENPPSALQSLPPATKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERA 164
Query: 77 KLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLK 113
LA+ L L Q+ +WFQNRR + K K+L D G L+
Sbjct: 165 HLAKNLKLTETQVKIWFQNRRYKTKRKQLTSDLGNLE 201
>UNIPROTKB|J9NSM7 [details] [associations]
symbol:EN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00680000099870 PROSITE:PS00033 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 EMBL:AAEX03011883
Ensembl:ENSCAFT00000048402 OMA:IGPAHRE Uniprot:J9NSM7
Length = 194
Score = 113 (44.8 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 21/65 (32%), Positives = 41/65 (63%)
Query: 39 REEASQATEKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNR 96
+++ ++ +K+ R T +Q++ L+ F+ + + R+ LA+EL L QI +WFQN+
Sbjct: 97 KKKKNEKEDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNK 156
Query: 97 RARLK 101
RA++K
Sbjct: 157 RAKIK 161
>UNIPROTKB|Q9W6D8 [details] [associations]
symbol:BARX1 "Homeobox protein BarH-like 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AF116460 IPI:IPI00600643
UniGene:Gga.44 ProteinModelPortal:Q9W6D8 SMR:Q9W6D8
HOVERGEN:HBG050665 Uniprot:Q9W6D8
Length = 207
Score = 114 (45.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 32/78 (41%), Positives = 41/78 (52%)
Query: 33 LEEEDCREEASQATEKKRRLTVD---QVKALEKNFEVDNKLE-PDRKVKLAEELGLQPRQ 88
LE E S+A + +R TV Q+ LEK FE L PDR + LAE LGL Q
Sbjct: 80 LEAAGSGEPGSKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDR-IDLAESLGLSQLQ 138
Query: 89 IAVWFQNRRARLKSKELE 106
+ W+QNRR + K L+
Sbjct: 139 VKTWYQNRRMKWKKIVLQ 156
>ZFIN|ZDB-GENE-980526-6 [details] [associations]
symbol:eng1b "engrailed 1b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEP]
InterPro:IPR000747 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-6 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048663
GeneTree:ENSGT00680000099870 PROSITE:PS00033 eggNOG:NOG238866
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 HOGENOM:HOG000247054 KO:K09319 OrthoDB:EOG4H72D0
EMBL:BX908756 EMBL:CU861653 EMBL:BC091669 IPI:IPI00555352
RefSeq:NP_001013516.1 UniGene:Dr.79493 SMR:Q5BJ08
Ensembl:ENSDART00000016642 GeneID:541371 KEGG:dre:541371 CTD:541371
InParanoid:Q5BJ08 OMA:LPHQAAQ NextBio:20879183 Uniprot:Q5BJ08
Length = 274
Score = 117 (46.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 22/65 (33%), Positives = 41/65 (63%)
Query: 39 REEASQATEKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNR 96
+++ S+ +K+ R T +Q++ L+ F+ + + R+ LA+EL L QI +WFQN+
Sbjct: 176 KKKKSEKEDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELNLNESQIKIWFQNK 235
Query: 97 RARLK 101
RA++K
Sbjct: 236 RAKIK 240
>UNIPROTKB|P31270 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001759 "organ induction" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0060272 "embryonic skeletal joint morphogenesis" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0001658 "branching involved
in ureteric bud morphogenesis" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0010720
"positive regulation of cell development" evidence=ISS] [GO:0030326
"embryonic limb morphogenesis" evidence=ISS] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISS]
[GO:0048589 "developmental growth" evidence=ISS] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007501
GO:GO:0030326 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 EMBL:AC004080 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
EMBL:AF071164 EMBL:AF039307 EMBL:BC040948 IPI:IPI00010754
PIR:S14931 RefSeq:NP_005514.1 UniGene:Hs.249171
ProteinModelPortal:P31270 SMR:P31270 IntAct:P31270 STRING:P31270
PhosphoSite:P31270 DMDM:13124744 PRIDE:P31270 DNASU:3207
Ensembl:ENST00000006015 GeneID:3207 KEGG:hsa:3207 UCSC:uc003syx.3
GeneCards:GC07M027220 HGNC:HGNC:5101 HPA:HPA035623 MIM:142958
MIM:605432 neXtProt:NX_P31270 Orphanet:71289 PharmGKB:PA29378
InParanoid:P31270 OrthoDB:EOG4KKZ3X PhylomeDB:P31270 ChiTaRS:HOXA11
GenomeRNAi:3207 NextBio:12762 Bgee:P31270 CleanEx:HS_HOXA11
Genevestigator:P31270 GermOnline:ENSG00000005073 Uniprot:P31270
Length = 313
Score = 118 (46.6 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 35 EEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
E+ + Q T KKR T Q++ LE+ F + +++++L+ L L RQ+ +WF
Sbjct: 230 EDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 289
Query: 94 QNRRARLKSKELERD 108
QNRR +K K++ RD
Sbjct: 290 QNRR--MKEKKINRD 302
>ZFIN|ZDB-GENE-000128-8 [details] [associations]
symbol:dbx1a "developing brain homeobox 1a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0021515 "cell
differentiation in spinal cord" evidence=IGI] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000128-8 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06602
GeneTree:ENSGT00700000104097 EMBL:AF030284 EMBL:BC095020
IPI:IPI00496328 RefSeq:NP_571233.1 UniGene:Dr.8070
ProteinModelPortal:Q9PTU1 Ensembl:ENSDART00000022441 GeneID:30394
KEGG:dre:30394 CTD:30394 HOGENOM:HOG000112172 HOVERGEN:HBG005454
InParanoid:Q9PTU1 NextBio:20806805 Bgee:Q9PTU1 GO:GO:0021515
Uniprot:Q9PTU1
Length = 314
Score = 118 (46.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 56 QVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQNRRARLK-SKELE 106
Q KALEK F+ + +PDRK KLA +LGL+ Q+ +WFQNRR + + SKE E
Sbjct: 186 QRKALEKMFQKQKYISKPDRK-KLAAKLGLKDSQVKIWFQNRRMKWRNSKERE 237
>UNIPROTKB|E1BNP2 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0048589 "developmental growth"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISS] [GO:0010720 "positive regulation of
cell development" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007501 "mesodermal cell fate specification"
evidence=ISS] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0030326 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:DAAA02010937 IPI:IPI00715888
Ensembl:ENSBTAT00000019611 Uniprot:E1BNP2
Length = 315
Score = 118 (46.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 35 EEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
E+ + Q T KKR T Q++ LE+ F + +++++L+ L L RQ+ +WF
Sbjct: 232 EDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 291
Query: 94 QNRRARLKSKELERD 108
QNRR +K K++ RD
Sbjct: 292 QNRR--MKEKKINRD 304
>UNIPROTKB|F1SHT7 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042733 "embryonic
digit morphogenesis" evidence=IEA] [GO:0032993 "protein-DNA
complex" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0010720 "positive
regulation of cell development" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
EMBL:CU570959 EMBL:CU480612 Ensembl:ENSSSCT00000018179
Uniprot:F1SHT7
Length = 316
Score = 118 (46.6 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 35 EEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
E+ + Q T KKR T Q++ LE+ F + +++++L+ L L RQ+ +WF
Sbjct: 233 EDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 292
Query: 94 QNRRARLKSKELERD 108
QNRR +K K++ RD
Sbjct: 293 QNRR--MKEKKINRD 305
>UNIPROTKB|F1MPM0 [details] [associations]
symbol:HESX1 "Homeobox 1" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0047485 "protein N-terminus
binding" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0030916 "otic vesicle formation"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
CTD:8820 KO:K09354 GO:GO:0030916 GO:GO:0043584
GeneTree:ENSGT00700000104128 GO:GO:0048853 OMA:PWADTCS
EMBL:DAAA02054314 EMBL:JQ711178 IPI:IPI00710649
RefSeq:NP_001178069.1 UniGene:Bt.32880 Ensembl:ENSBTAT00000001886
GeneID:781811 KEGG:bta:781811 NextBio:20925056 Uniprot:F1MPM0
Length = 185
Score = 112 (44.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 53 TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLL 112
T +Q++ LE F V+ D + LA++L L+ +I +WFQNRRA+LK E + +
Sbjct: 116 TQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRAKLKRSHRESQFLMA 175
Query: 113 KANYD 117
K N++
Sbjct: 176 KKNFN 180
>DICTYBASE|DDB_G0291075 [details] [associations]
symbol:warA "putative homeobox transcription factor"
species:44689 "Dictyostelium discoideum" [GO:0045595 "regulation of
cell differentiation" evidence=IMP] [GO:0009653 "anatomical
structure morphogenesis" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR002110 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00023 Pfam:PF00046
PRINTS:PR01415 PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS50088
SMART:SM00248 SMART:SM00389 dictyBase:DDB_G0291075 GO:GO:0007275
GO:GO:0005634 GO:GO:0045595 eggNOG:COG0666 GO:GO:0043565
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003700 GO:GO:0006351
GenomeReviews:CM000154_GR Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009653 HSSP:P09959 EMBL:AAFI02000175 EMBL:AF036170
RefSeq:XP_635408.1 ProteinModelPortal:Q54F46
EnsemblProtists:DDB0191441 GeneID:8627992 KEGG:ddi:DDB_G0291075
ProtClustDB:CLSZ2846613 Uniprot:Q54F46
Length = 803
Score = 112 (44.5 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 40 EEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR 99
++ + +K++R + DQ+K LEK F + + +LA EL + R + +WFQNRRA+
Sbjct: 157 DQDDPSKKKRKRTSPDQLKLLEKIFMAHQHPNLNLRSQLAVELHMTARSVQIWFQNRRAK 216
Query: 100 LKSKEL--ERDYGLLKANYDAL 119
++ E + +G Y+AL
Sbjct: 217 ARNMEFKPQLSHGGSDLIYNAL 238
Score = 53 (23.7 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 143 KLCQENEETSHAVEAEAPVSEQSKNHVSSENAN 175
KL QEN++ E+ V++ S N+ S+ N N
Sbjct: 675 KLIQENQDKEIIQMLESTVTKSSNNNNSNSNIN 707
>UNIPROTKB|F1MD21 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 IPI:IPI00689409 UniGene:Bt.111374
OMA:NCGSGLN GO:GO:0021658 EMBL:DAAA02010939
Ensembl:ENSBTAT00000010699 Uniprot:F1MD21
Length = 372
Score = 119 (46.9 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 42/144 (29%), Positives = 67/144 (46%)
Query: 32 CLEEEDCREEASQATEKKRRL----TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPR 87
CL ++ E A + RRL T Q+ LEK F + L R+V++A L L R
Sbjct: 122 CLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTER 181
Query: 88 QIAVWFQNRRARLKS----KELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAK 143
Q+ VWFQNRR + K KE + G K+ D+ ++D + +E ++L + +
Sbjct: 182 QVKVWFQNRRMKHKRQTQCKENQNSEGKFKSLEDSEKVDED---EEEKSLFEQALSVSGA 238
Query: 144 LCQENEETSHAVEAEAPVSEQSKN 167
L E + + A +Q+ N
Sbjct: 239 LL---EREGYTFQQNALSQQQASN 259
>ZFIN|ZDB-GENE-990415-4 [details] [associations]
symbol:hoxa11b "homeo box A11b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-4 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X EMBL:AF287137
EMBL:DQ060539 EMBL:Y07698 IPI:IPI00487877 RefSeq:NP_571222.1
UniGene:Dr.85393 ProteinModelPortal:Q9DDU1 SMR:Q9DDU1 GeneID:30382
KEGG:dre:30382 CTD:30382 InParanoid:Q9DDU1 NextBio:20806797
ArrayExpress:Q9DDU1 Uniprot:Q9DDU1
Length = 283
Score = 117 (46.2 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 44 QATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKS 102
Q T KKR T Q++ LE+ F + +++++L+ L L RQ+ +WFQNRR +K
Sbjct: 209 QKTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRR--MKE 266
Query: 103 KELERD 108
K+L RD
Sbjct: 267 KKLNRD 272
>UNIPROTKB|A2VDR0 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 CTD:4222 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J EMBL:DAAA02049232 EMBL:BC133359 IPI:IPI00702466
RefSeq:NP_001030453.2 UniGene:Bt.65876 SMR:A2VDR0
Ensembl:ENSBTAT00000054676 GeneID:529059 KEGG:bta:529059
InParanoid:A2VDR0 NextBio:20874954 Uniprot:A2VDR0
Length = 254
Score = 116 (45.9 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 12 DKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLE 71
+K ST+RK+ D E E AS+A +++ T +Q++ LE F N L
Sbjct: 145 EKKSTRRKK-------ENSDNQENRAKPEGASKARKERTAFTKEQLRELEAEFAHHNYLT 197
Query: 72 PDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
R+ ++A L L RQ+ VWFQNRR + K
Sbjct: 198 RLRRYEIAVNLDLSERQVKVWFQNRRMKWK 227
>UNIPROTKB|F1MXQ1 [details] [associations]
symbol:F1MXQ1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 GO:GO:0030902
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:DAAA02012122
EMBL:DAAA02012123 IPI:IPI00718569 Ensembl:ENSBTAT00000028648
OMA:PSTHMEA Uniprot:F1MXQ1
Length = 186
Score = 112 (44.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 47 EKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+K+ R T +Q++ L+ F+ + L R+ LA+EL L QI +WFQN+RA++K
Sbjct: 97 DKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKRAKIK 153
>ZFIN|ZDB-GENE-980526-216 [details] [associations]
symbol:eng1a "engrailed 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-216 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 EMBL:CABZ01070420 EMBL:BC080209 IPI:IPI00500053
UniGene:Dr.75072 SMR:Q68EL7 STRING:Q68EL7
Ensembl:ENSDART00000012506 InParanoid:Q68EL7 Uniprot:Q68EL7
Length = 231
Score = 115 (45.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 43 SQATEKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
+++ +K+ R T +Q++ L+ F+ + R+ LA ELGL QI +WFQN+RA++
Sbjct: 139 TESDDKRPRTAFTAEQLQRLKAEFQTSRYITEQRRQALARELGLNESQIKIWFQNKRAKI 198
Query: 101 K 101
K
Sbjct: 199 K 199
>RGD|3116 [details] [associations]
symbol:Msx2 "msh homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000989 "transcription factor binding transcription
factor activity" evidence=IEA;ISO] [GO:0001503 "ossification"
evidence=ISO] [GO:0001649 "osteoblast differentiation"
evidence=ISO;ISS] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;IEP;ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IEA;ISO] [GO:0003151 "outflow tract
morphogenesis" evidence=ISO] [GO:0003198 "epithelial to mesenchymal
transition involved in endocardial cushion formation"
evidence=IEA;ISO] [GO:0003416 "endochondral bone growth"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription factor
complex" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA;ISO]
[GO:0030326 "embryonic limb morphogenesis" evidence=ISO] [GO:0030509
"BMP signaling pathway" evidence=ISO] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA;ISO] [GO:0032792
"negative regulation of CREB transcription factor activity"
evidence=IEA;ISO] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA;ISO] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA;ISO] [GO:0035313 "wound healing, spreading of epidermal
cells" evidence=IEA;ISO] [GO:0035880 "embryonic nail plate
morphogenesis" evidence=IEA;ISO] [GO:0042060 "wound healing"
evidence=ISO] [GO:0042476 "odontogenesis" evidence=ISO] [GO:0042640
"anagen" evidence=IEA;ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO;ISS] [GO:0045599 "negative
regulation of fat cell differentiation" evidence=IEA;ISO] [GO:0045617
"negative regulation of keratinocyte differentiation"
evidence=IEA;ISO] [GO:0045669 "positive regulation of osteoblast
differentiation" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;ISS] [GO:0048863 "stem
cell differentiation" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=ISO;IMP] [GO:0051795 "positive regulation of
catagen" evidence=IEA;ISO] [GO:0060346 "bone trabecula formation"
evidence=IEA;ISO] [GO:0060349 "bone morphogenesis" evidence=ISO]
[GO:0060364 "frontal suture morphogenesis" evidence=IEA;ISO]
[GO:0060444 "branching involved in mammary gland duct morphogenesis"
evidence=IEA;ISO] [GO:0061180 "mammary gland epithelium development"
evidence=ISO] [GO:0061312 "BMP signaling pathway involved in heart
development" evidence=IEA;ISO] [GO:0070166 "enamel mineralization"
evidence=IEA;ISO] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEA;ISO] [GO:0071392 "cellular response to
estradiol stimulus" evidence=IEA;ISO] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3116 GO:GO:0005737
GO:GO:0045892 GO:GO:0043066 GO:GO:0008285 GO:GO:0071363 GO:GO:0009952
GO:GO:0048863 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000978 GO:GO:0000122
GO:GO:0043065 GO:GO:0000982 GO:GO:0002076 GO:GO:0030513 GO:GO:0035313
GO:GO:0051216 GO:GO:0045669 GO:GO:0045599 GO:GO:0035116 GO:GO:0042640
GO:GO:0035115 GO:GO:0070166 GO:GO:0071392 GO:GO:0000989 GO:GO:0023019
GO:GO:0060444 GO:GO:0002063 GO:GO:0060346 GO:GO:0032792 GO:GO:0003416
GO:GO:0003148 GO:GO:0003198 GO:GO:2000678 GO:GO:0060364
eggNOG:NOG298790 HOGENOM:HOG000231922 OrthoDB:EOG4HQDK0 GO:GO:0045617
GO:GO:0061312 GO:GO:0035880 GO:GO:0051795 EMBL:U12514 IPI:IPI00231048
UniGene:Rn.10414 ProteinModelPortal:P52953 SMR:P52953 STRING:P52953
HOVERGEN:HBG066288 InParanoid:P52953 Genevestigator:P52953
GermOnline:ENSRNOG00000018355 Uniprot:P52953
Length = 139
Score = 101 (40.6 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 46 TEKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRA---RL 100
T +K R T Q+ ALE+ F L + + + L L Q+ +WFQNRRA RL
Sbjct: 13 TNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRL 72
Query: 101 KSKELER 107
+ ELE+
Sbjct: 73 QEAELEK 79
>UNIPROTKB|P52953 [details] [associations]
symbol:Msx2 "Homeobox protein MSX-2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000989
"transcription factor binding transcription factor activity"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0003148 "outflow tract septum morphogenesis" evidence=IEA]
[GO:0003198 "epithelial to mesenchymal transition involved in
endocardial cushion formation" evidence=IEA] [GO:0003416
"endochondral bone growth" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0030513 "positive regulation of BMP signaling pathway"
evidence=IEA] [GO:0032792 "negative regulation of CREB
transcription factor activity" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IEA] [GO:0035880 "embryonic
nail plate morphogenesis" evidence=IEA] [GO:0042640 "anagen"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=IEA] [GO:0048863
"stem cell differentiation" evidence=IEA] [GO:0051795 "positive
regulation of catagen" evidence=IEA] [GO:0060346 "bone trabecula
formation" evidence=IEA] [GO:0060364 "frontal suture morphogenesis"
evidence=IEA] [GO:0060444 "branching involved in mammary gland duct
morphogenesis" evidence=IEA] [GO:0061312 "BMP signaling pathway
involved in heart development" evidence=IEA] [GO:0070166 "enamel
mineralization" evidence=IEA] [GO:0071363 "cellular response to
growth factor stimulus" evidence=IEA] [GO:0071392 "cellular
response to estradiol stimulus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3116
GO:GO:0005737 GO:GO:0045892 GO:GO:0043066 GO:GO:0008285
GO:GO:0071363 GO:GO:0009952 GO:GO:0048863 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000978 GO:GO:0000122 GO:GO:0043065 GO:GO:0000982
GO:GO:0002076 GO:GO:0030513 GO:GO:0035313 GO:GO:0051216
GO:GO:0045669 GO:GO:0045599 GO:GO:0035116 GO:GO:0042640
GO:GO:0035115 GO:GO:0070166 GO:GO:0071392 GO:GO:0000989
GO:GO:0023019 GO:GO:0060444 GO:GO:0002063 GO:GO:0060346
GO:GO:0032792 GO:GO:0003416 GO:GO:0003148 GO:GO:0003198
GO:GO:2000678 GO:GO:0060364 eggNOG:NOG298790 HOGENOM:HOG000231922
OrthoDB:EOG4HQDK0 GO:GO:0045617 GO:GO:0061312 GO:GO:0035880
GO:GO:0051795 EMBL:U12514 IPI:IPI00231048 UniGene:Rn.10414
ProteinModelPortal:P52953 SMR:P52953 STRING:P52953
HOVERGEN:HBG066288 InParanoid:P52953 Genevestigator:P52953
GermOnline:ENSRNOG00000018355 Uniprot:P52953
Length = 139
Score = 101 (40.6 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 46 TEKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRA---RL 100
T +K R T Q+ ALE+ F L + + + L L Q+ +WFQNRRA RL
Sbjct: 13 TNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRL 72
Query: 101 KSKELER 107
+ ELE+
Sbjct: 73 QEAELEK 79
>UNIPROTKB|E2R114 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
CTD:3207 KO:K09296 OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:AAEX03009390
RefSeq:XP_003431971.2 Ensembl:ENSCAFT00000004754 GeneID:100683897
KEGG:cfa:100683897 Uniprot:E2R114
Length = 327
Score = 118 (46.6 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 35 EEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
E+ + Q T KKR T Q++ LE+ F + +++++L+ L L RQ+ +WF
Sbjct: 244 EDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 303
Query: 94 QNRRARLKSKELERD 108
QNRR +K K++ RD
Sbjct: 304 QNRR--MKEKKINRD 316
>ZFIN|ZDB-GENE-990415-121 [details] [associations]
symbol:hoxd9a "homeo box D9a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR006711 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-121 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 InterPro:IPR017112 PIRSF:PIRSF037109 KO:K09294
EMBL:AF071268 EMBL:BC056695 EMBL:DQ060566 EMBL:Y14536
IPI:IPI00504959 RefSeq:NP_571201.3 UniGene:Dr.75792
ProteinModelPortal:Q9PWM6 SMR:Q9PWM6 Ensembl:ENSDART00000082354
GeneID:30350 KEGG:dre:30350 CTD:30350 InParanoid:Q9PWM6 OMA:WSSVHPQ
OrthoDB:EOG4MPHRC NextBio:20806778 Bgee:Q9PWM6 Uniprot:Q9PWM6
Length = 262
Score = 116 (45.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 43 SQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+++T KKR T Q LEK F + L DR+ ++A L L RQ+ +WFQNRR ++K
Sbjct: 192 ARSTRKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMK 251
Query: 102 SKELER 107
ER
Sbjct: 252 KMNRER 257
>UNIPROTKB|H0YJ33 [details] [associations]
symbol:CDX2 "Homeobox protein CDX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AL591024 HGNC:HGNC:1806 Ensembl:ENST00000548877
Uniprot:H0YJ33
Length = 156
Score = 107 (42.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 46 TEKKRRL--TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRAR---L 100
T+ K R+ T Q LEK F + RK +LA LGL RQ+ +WFQNRRA+ +
Sbjct: 28 TKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKI 87
Query: 101 KSKELER 107
K+L++
Sbjct: 88 NKKKLQQ 94
>RGD|3674 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA;ISO] [GO:0002053 "positive regulation of mesenchymal
cell proliferation" evidence=IEA;ISO] [GO:0002062 "chondrocyte
differentiation" evidence=ISO] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0003170 "heart valve development"
evidence=IEA;ISO] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA;ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA;ISO] [GO:0048598 "embryonic
morphogenesis" evidence=ISO] [GO:0048743 "positive regulation of
skeletal muscle fiber development" evidence=IEA;ISO] [GO:0050772
"positive regulation of axonogenesis" evidence=IEA;ISO] [GO:0060272
"embryonic skeletal joint morphogenesis" evidence=IEA;ISO]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA;ISO] [GO:0060415 "muscle tissue
morphogenesis" evidence=IEA;ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3674
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272
GO:GO:0002053 GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 115 (45.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 31/102 (30%), Positives = 58/102 (56%)
Query: 35 EEDCR--EEASQATEKKRR----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQ 88
+ED + E+ Q K+RR T++Q+ LE+ F+ + + + +L++ LGL +
Sbjct: 30 KEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 89
Query: 89 IAVWFQNRRARLKSKELERDYGLL---KANYDALRL-DYNNL 126
+ VWFQNRRA+ + +E + G+L + ++A R+ Y N+
Sbjct: 90 VQVWFQNRRAKCRKQENQLHKGVLIGAASQFEACRVAPYVNV 131
>UNIPROTKB|O35750 [details] [associations]
symbol:Shox2 "Short stature homeobox protein 2"
species:10116 "Rattus norvegicus" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3674 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0030326 GO:GO:0050772 GO:GO:0032330 GO:GO:0001649
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 115 (45.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 31/102 (30%), Positives = 58/102 (56%)
Query: 35 EEDCR--EEASQATEKKRR----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQ 88
+ED + E+ Q K+RR T++Q+ LE+ F+ + + + +L++ LGL +
Sbjct: 30 KEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 89
Query: 89 IAVWFQNRRARLKSKELERDYGLL---KANYDALRL-DYNNL 126
+ VWFQNRRA+ + +E + G+L + ++A R+ Y N+
Sbjct: 90 VQVWFQNRRAKCRKQENQLHKGVLIGAASQFEACRVAPYVNV 131
>UNIPROTKB|P31277 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001656 "metanephros development" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0032332
GO:GO:0048589 GO:GO:0009953 GO:GO:0009954 GO:GO:0042733
GO:GO:0001658 GO:GO:0001656 GO:GO:0001759 GO:GO:0060351
EMBL:AC009336 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X
CTD:3237 EMBL:AF154915 IPI:IPI00305856 PIR:S14938
RefSeq:NP_067015.2 UniGene:Hs.421136 ProteinModelPortal:P31277
SMR:P31277 STRING:P31277 DMDM:223590220 PRIDE:P31277 DNASU:3237
Ensembl:ENST00000249504 GeneID:3237 KEGG:hsa:3237 UCSC:uc002uki.3
GeneCards:GC02P176936 HGNC:HGNC:5134 MIM:142986 neXtProt:NX_P31277
PharmGKB:PA29408 eggNOG:NOG305087 OMA:SPCTKAT GenomeRNAi:3237
NextBio:12883 ArrayExpress:P31277 Bgee:P31277 CleanEx:HS_HOXD11
Genevestigator:P31277 GermOnline:ENSG00000128713 Uniprot:P31277
Length = 338
Score = 118 (46.6 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 35 EEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
E+ A Q + KKR T Q++ LE+ F + + +++++L+ L L RQ+ +WF
Sbjct: 255 EKSSSAVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWF 314
Query: 94 QNRRARLKSKELERD 108
QNRR +K K+L RD
Sbjct: 315 QNRR--MKEKKLNRD 327
>TAIR|locus:2145116 [details] [associations]
symbol:HDG7 "AT5G52170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 eggNOG:euNOG18333
HOGENOM:HOG000243256 HSSP:Q6B2C0 EMBL:AB025603 IPI:IPI00525258
RefSeq:NP_200030.1 UniGene:At.55500 ProteinModelPortal:Q9LTK3
SMR:Q9LTK3 EnsemblPlants:AT5G52170.1 GeneID:835293
KEGG:ath:AT5G52170 TAIR:At5g52170 InParanoid:Q9LTK3
PhylomeDB:Q9LTK3 Genevestigator:Q9LTK3 Uniprot:Q9LTK3
Length = 682
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 32/104 (30%), Positives = 59/104 (56%)
Query: 26 FQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQ 85
F AM ++++ R + + K R T Q++ LE F+ ++++L ++L L+
Sbjct: 38 FDAMSGDEDKQEQRPKKKKRKTKYHRHTSYQIQELESFFKECPHPNEKQRLELGKKLTLE 97
Query: 86 PRQIAVWFQNRRARLKSKELERDYG-LLKANYDALRLDYNNLQQ 128
+QI WFQNRR ++K+ +LER +LK + LRL+ + L++
Sbjct: 98 SKQIKFWFQNRRTQMKT-QLERHENVILKQENEKLRLENSFLKE 140
>ZFIN|ZDB-GENE-050309-27 [details] [associations]
symbol:lbx1b "ladybird homeobox 1b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-050309-27 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 EMBL:CR855357 EMBL:CT573247
IPI:IPI00866445 RefSeq:NP_001156784.1 UniGene:Dr.109231
Ensembl:ENSDART00000007770 GeneID:793810 KEGG:dre:793810 CTD:793810
NextBio:20931589 Bgee:E7FDX5 Uniprot:E7FDX5
Length = 265
Score = 116 (45.9 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 39 REEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRA 98
R+ + + + T Q+ LEK F L P + ++A +LGL Q+ WFQNRRA
Sbjct: 115 RDSPKKRRKSRTAFTNHQLYELEKRFLHQKYLSPADRDQIAHQLGLTNAQVITWFQNRRA 174
Query: 99 RLKSKELERDYGLLKANYDALR 120
+LK ++LE +KA+ +++R
Sbjct: 175 KLK-RDLEE----MKADVESVR 191
>UNIPROTKB|F1NC59 [details] [associations]
symbol:F1NC59 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 OMA:RRYEISQ EMBL:AADN02000989
IPI:IPI00822649 Ensembl:ENSGALT00000037820 Uniprot:F1NC59
Length = 59
Score = 98 (39.6 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 48 KKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
KKR T Q LEK F + L +R+++++ + L RQ+ +WFQNRR +LK
Sbjct: 2 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRTVHLTDRQVKIWFQNRRMKLK 56
>UNIPROTKB|E1BS07 [details] [associations]
symbol:DBX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021521
"ventral spinal cord interneuron specification" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104097 CTD:120237 OMA:YHASPDP
EMBL:AADN02040078 IPI:IPI00580884 RefSeq:NP_001186403.1
UniGene:Gga.25865 Ensembl:ENSGALT00000006317 GeneID:422976
KEGG:gga:422976 NextBio:20825517 Uniprot:E1BS07
Length = 340
Score = 118 (46.6 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 56 QVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQNRRARLK-SKELE 106
Q KALEK F+ + +PDRK KLA +LGL+ Q+ +WFQNRR + + SKE E
Sbjct: 186 QRKALEKMFQKQKYISKPDRK-KLAAKLGLKDSQVKIWFQNRRMKWRNSKERE 237
>UNIPROTKB|A6NMT0 [details] [associations]
symbol:DBX1 "Homeobox protein DBX1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 HOVERGEN:HBG005454 CTD:120237
EMBL:AC068860 IPI:IPI00027329 RefSeq:NP_001025036.2
UniGene:Hs.558604 ProteinModelPortal:A6NMT0 SMR:A6NMT0
PhosphoSite:A6NMT0 PRIDE:A6NMT0 DNASU:120237
Ensembl:ENST00000524983 GeneID:120237 KEGG:hsa:120237
UCSC:uc021qey.1 GeneCards:GC11M020177 HGNC:HGNC:33185 HPA:HPA039802
neXtProt:NX_A6NMT0 PhylomeDB:A6NMT0 GenomeRNAi:120237 NextBio:80553
ArrayExpress:A6NMT0 Bgee:A6NMT0 CleanEx:HS_DBX1
Genevestigator:A6NMT0 Uniprot:A6NMT0
Length = 343
Score = 118 (46.6 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 56 QVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQNRRARLK-SKELE 106
Q KALEK F+ + +PDRK KLA +LGL+ Q+ +WFQNRR + + SKE E
Sbjct: 192 QRKALEKMFQKQKYISKPDRK-KLAAKLGLKDSQVKIWFQNRRMKWRNSKERE 243
>UNIPROTKB|F1SFY4 [details] [associations]
symbol:DBX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0021521 "ventral
spinal cord interneuron specification" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104097 OMA:YHASPDP GO:GO:0021521
EMBL:CU571227 RefSeq:XP_003122964.1 UniGene:Ssc.94783
Ensembl:ENSSSCT00000014579 GeneID:100520887 KEGG:ssc:100520887
Uniprot:F1SFY4
Length = 343
Score = 118 (46.6 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 56 QVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQNRRARLK-SKELE 106
Q KALEK F+ + +PDRK KLA +LGL+ Q+ +WFQNRR + + SKE E
Sbjct: 192 QRKALEKMFQKQKYISKPDRK-KLAAKLGLKDSQVKIWFQNRRMKWRNSKERE 243
>ZFIN|ZDB-GENE-081104-285 [details] [associations]
symbol:si:ch73-374a6.1 "si:ch73-374a6.1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-081104-285 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 KO:K09361 CTD:8538
EMBL:CU607072 EMBL:CU633933 IPI:IPI00637337 RefSeq:XP_001342044.1
UniGene:Dr.112585 Ensembl:ENSDART00000138806 GeneID:100002200
KEGG:dre:100002200 Uniprot:F6NKZ9
Length = 268
Score = 116 (45.9 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 34 EEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLE-PDRKVKLAEELGLQPRQIAVW 92
+ E C + + T Q+ LEK F+ L PDR + LA+ LGL Q+ W
Sbjct: 108 DTEHCTPRLKKPRRSRTIFTELQLLGLEKKFQKQKYLSTPDR-LDLAQSLGLTQLQVKTW 166
Query: 93 FQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELR---ELKAKLCQENE 149
+QNRR +K K++ +LK ++A ++ + T E+ ++AKL +E
Sbjct: 167 YQNRR--MKWKKM-----VLKGGHEAPTKPKGRPKKNSIPTTEEIEAQERMEAKLAEE-- 217
Query: 150 ETSHAVEAEAPVSEQSKNHVSSENANA 176
E HA E E V + +S+ +A
Sbjct: 218 ERLHA-EVEDEVFQSQPQDLSTSATSA 243
>UNIPROTKB|A5PKG8 [details] [associations]
symbol:DBX1 "Homeobox protein DBX1" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0021521 "ventral
spinal cord interneuron specification" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104097 HOGENOM:HOG000112172
HOVERGEN:HBG005454 eggNOG:NOG257690 OrthoDB:EOG4T4CW6 EMBL:BC142482
IPI:IPI00854488 RefSeq:NP_001092468.1 UniGene:Bt.88762
ProteinModelPortal:A5PKG8 PRIDE:A5PKG8 Ensembl:ENSBTAT00000003543
GeneID:517514 KEGG:bta:517514 CTD:120237 InParanoid:A5PKG8
OMA:YHASPDP NextBio:20872455 GO:GO:0021521 Uniprot:A5PKG8
Length = 345
Score = 118 (46.6 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 56 QVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQNRRARLK-SKELE 106
Q KALEK F+ + +PDRK KLA +LGL+ Q+ +WFQNRR + + SKE E
Sbjct: 193 QRKALEKMFQKQKYISKPDRK-KLAAKLGLKDSQVKIWFQNRRMKWRNSKERE 244
>UNIPROTKB|O76762 [details] [associations]
symbol:abd-A "Homeobox protein abdominal-A homolog"
species:7165 "Anopheles gambiae" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 eggNOG:NOG328968 OrthoDB:EOG4F7M1W
Gene3D:1.10.10.60 InterPro:IPR022132 InterPro:IPR020479
Pfam:PF12407 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AF080566
EMBL:AAAB01008850 RefSeq:XP_311627.4 HSSP:P02833
ProteinModelPortal:O76762 SMR:O76762 EnsemblMetazoa:AGAP004662-RA
GeneID:1272718 KEGG:aga:AgaP_AGAP004662 VectorBase:AGAP004662
CTD:1272718 HOGENOM:HOG000231181 InParanoid:O76762 Uniprot:O76762
Length = 308
Score = 117 (46.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 34/96 (35%), Positives = 50/96 (52%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKAN 115
Q LEK F ++ L R++++A L L RQI +WFQNRR +LK KEL + + N
Sbjct: 149 QTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK-KELR---AVKEIN 204
Query: 116 YDALRLDYNNLQQENEALTAELRELKAKLCQENEET 151
A R + +NE+L + + K Q+ E T
Sbjct: 205 EQARREREEQDKMKNESLKSAQQHHSQKQAQQ-EHT 239
>UNIPROTKB|F1MRG3 [details] [associations]
symbol:NOBOX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001541 "ovarian
follicle development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001541 CTD:135935 OMA:CPQALGH
GeneTree:ENSGT00650000093445 EMBL:DAAA02011823 IPI:IPI00693587
RefSeq:XP_002687182.2 RefSeq:XP_606837.6 UniGene:Bt.106636
Ensembl:ENSBTAT00000012965 GeneID:528414 KEGG:bta:528414
Uniprot:F1MRG3
Length = 499
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 25/67 (37%), Positives = 44/67 (65%)
Query: 34 EEEDCREEASQATEKKRRL-TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVW 92
+E+ E Q +K R L DQ++ LE+ F+ D+ + D++ ++A+ +G+ P++I VW
Sbjct: 105 QEKRSPEVTCQVRKKTRTLYRSDQLEELERLFQDDHYPDSDKRREIAQTVGVTPQRIMVW 164
Query: 93 FQNRRAR 99
FQNRRA+
Sbjct: 165 FQNRRAK 171
>MGI|MGI:96172 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0001656 "metanephros development" evidence=IGI] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IGI]
[GO:0001759 "organ induction" evidence=IGI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IDA] [GO:0007501 "mesodermal cell fate specification"
evidence=IDA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0010720 "positive regulation of cell
development" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IGI] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IGI] [GO:0032993 "protein-DNA
complex" evidence=IDA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IGI] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96172 GO:GO:0005737
GO:GO:0045893 GO:GO:0005730 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0060272 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:U20371 EMBL:U20370 EMBL:AK133481
EMBL:BC119302 IPI:IPI00133248 PIR:G37290 RefSeq:NP_034580.1
UniGene:Mm.26954 ProteinModelPortal:P31311 SMR:P31311 IntAct:P31311
MINT:MINT-1172550 STRING:P31311 PhosphoSite:P31311 PRIDE:P31311
Ensembl:ENSMUST00000048026 GeneID:15396 KEGG:mmu:15396
UCSC:uc009byn.1 GeneTree:ENSGT00700000104263 InParanoid:P31311
NextBio:288080 Bgee:P31311 CleanEx:MM_HOXA11 Genevestigator:P31311
GermOnline:ENSMUSG00000038210 Uniprot:P31311
Length = 313
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 35 EEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
E+ Q T KKR T Q++ LE+ F + +++++L+ L L RQ+ +WF
Sbjct: 230 EDKAGGSGGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 289
Query: 94 QNRRARLKSKELERD 108
QNRR +K K++ RD
Sbjct: 290 QNRR--MKEKKINRD 302
>RGD|1564605 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0001656
"metanephros development" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISO] [GO:0001759
"organ induction" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=ISO] [GO:0007501 "mesodermal cell fate
specification" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISO] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=ISO] [GO:0010720 "positive regulation
of cell development" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=ISO] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=ISO] [GO:0032993 "protein-DNA
complex" evidence=ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048589 "developmental growth"
evidence=ISO] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=ISO] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1564605 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295 CTD:3207 KO:K09296
OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:CH474011 EMBL:AC122669
RefSeq:NP_001123350.1 RefSeq:XP_003749800.1 RefSeq:XP_003752232.1
RefSeq:XP_003753947.1 UniGene:Rn.224575 Ensembl:ENSRNOT00000010256
GeneID:100909443 GeneID:100911743 GeneID:368057 KEGG:rno:100909443
KEGG:rno:100911743 KEGG:rno:368057 NextBio:691993 Uniprot:G3V6Z0
Length = 313
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 35 EEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWF 93
E+ Q T KKR T Q++ LE+ F + +++++L+ L L RQ+ +WF
Sbjct: 230 EDKAGGSGGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWF 289
Query: 94 QNRRARLKSKELERD 108
QNRR +K K++ RD
Sbjct: 290 QNRR--MKEKKINRD 302
>UNIPROTKB|P24342 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOVERGEN:HBG052048 KO:K09296
InterPro:IPR021918 Pfam:PF12045 EMBL:M81249 EMBL:D10288
IPI:IPI00583692 PIR:B37914 RefSeq:NP_989951.1 UniGene:Gga.958
ProteinModelPortal:P24342 SMR:P24342 STRING:P24342 GeneID:395328
KEGG:gga:395328 CTD:3237 eggNOG:NOG244779 NextBio:20815413
Uniprot:P24342
Length = 280
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 31 DCLEEEDCREEASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQI 89
+ + E+ Q + KKR T Q++ LE+ F + + +++++L+ L L RQ+
Sbjct: 193 EAVAEKSNSSAVPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQV 252
Query: 90 AVWFQNRRARLKSKELERD 108
+WFQNRR +K K+L RD
Sbjct: 253 KIWFQNRR--MKEKKLNRD 269
>ZFIN|ZDB-GENE-000823-1 [details] [associations]
symbol:hoxa9a "homeo box A9a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-1 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG286554 GeneTree:ENSGT00700000104054 EMBL:CR382300
HOVERGEN:HBG016849 EMBL:AF071248 EMBL:BC090700 EMBL:DQ060535
EMBL:Y14538 IPI:IPI00499910 RefSeq:NP_571607.2 UniGene:Dr.5730
ProteinModelPortal:Q9PWL6 SMR:Q9PWL6 STRING:Q9PWL6
Ensembl:ENSDART00000006934 Ensembl:ENSDART00000147736 GeneID:58047
KEGG:dre:58047 CTD:58047 HOGENOM:HOG000231180 InParanoid:Q9PWL6
OrthoDB:EOG4D26QZ NextBio:20892311 Bgee:Q9PWL6 InterPro:IPR017112
PIRSF:PIRSF037109 Uniprot:Q9PWL6
Length = 250
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 43 SQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+ +T KKR T Q+ LEK F + L DR+ ++A L L RQ+ +WFQNRR ++K
Sbjct: 181 ASSTRKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 240
>SGD|S000002764 [details] [associations]
symbol:SPC110 "Inner plaque spindle pole body (SPB)
component" species:4932 "Saccharomyces cerevisiae" [GO:0005816
"spindle pole body" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000742 "karyogamy involved in conjugation with
cellular fusion" evidence=IGI;IMP] [GO:0005200 "structural
constituent of cytoskeleton" evidence=IPI] [GO:0005823 "central
plaque of spindle pole body" evidence=IDA] [GO:0005822 "inner
plaque of spindle pole body" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007020 "microtubule nucleation"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] SGD:S000002764
GO:GO:0005634 GO:GO:0005200 EMBL:BK006938 eggNOG:NOG12793
GO:GO:0007020 EMBL:U28372 KO:K15262 RefSeq:NP_010648.3
GeneID:851963 KEGG:sce:YDR361C GO:GO:0000742 GO:GO:0005823
GeneTree:ENSGT00700000104848 RefSeq:NP_010643.3 GeneID:851957
KEGG:sce:YDR356W EMBL:Z11582 EMBL:X73297 PIR:S26710 PDB:4DS7
PDBsum:4DS7 ProteinModelPortal:P32380 SMR:P32380 DIP:DIP-702N
IntAct:P32380 MINT:MINT-644728 STRING:P32380 PaxDb:P32380
PeptideAtlas:P32380 EnsemblFungi:YDR356W CYGD:YDR356w OMA:EVRHNND
OrthoDB:EOG4F4WKW NextBio:970062 Genevestigator:P32380
GermOnline:YDR356W GO:GO:0005822 Uniprot:P32380
Length = 944
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 49/178 (27%), Positives = 73/178 (41%)
Query: 11 EDKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDN-K 69
E + K K + R+ C+EE + E E+K + DQV LE N +V + K
Sbjct: 204 EKELDAKNKIVNSRKVDDHSGCIEEREQMERKLAELERKLKTVKDQVLELENNSDVQSLK 263
Query: 70 L--EPDRKVKLAEELG-----LQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLD 122
L + D L EL + + + F+ R ++ EL LK D + L
Sbjct: 264 LRSKEDELKNLMNELNELKSNAEEKDTQLEFKKNELRKRTNELNE----LKIKSDEMDLQ 319
Query: 123 YNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVSSE--NANAQL 178
Q E++ L EL EL+ K EN S A E E + + + E N+QL
Sbjct: 320 LKQKQNESKRLKDELNELETKF-SENGSQSSAKENELKMLKNKIAELEEEISTKNSQL 376
>FB|FBgn0014949 [details] [associations]
symbol:btn "buttonless" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HSSP:P14653 EMBL:S75228 ProteinModelPortal:Q26381
FlyBase:FBgn0014949 InParanoid:Q26381 OrthoDB:EOG4RFJ98
Uniprot:Q26381
Length = 158
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 28/79 (35%), Positives = 40/79 (50%)
Query: 33 LEEEDCREEASQATEKKRR-LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAV 91
L + + A + K+R + Q+K LE F N L R+ ++A L L RQ+ V
Sbjct: 73 LPSQRSKLRAISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKV 132
Query: 92 WFQNRRARLKSKELERDYG 110
WFQNRR + K +LE G
Sbjct: 133 WFQNRRMKCKRIKLEEQQG 151
>MGI|MGI:96203 [details] [associations]
symbol:Hoxd11 "homeobox D11" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0001656 "metanephros development" evidence=IGI] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IGI]
[GO:0001759 "organ induction" evidence=IGI] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IGI] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0010720 "positive regulation of cell
development" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IGI] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IGI] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IGI] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96203 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0032332 GO:GO:0048589 GO:GO:0009953 GO:GO:0009954
GO:GO:0042733 GO:GO:0001658 GO:GO:0001656 GO:GO:0060272
GO:GO:0001759 GO:GO:0060351 HOVERGEN:HBG052048 KO:K09296
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X
CTD:3237 eggNOG:NOG305087 EMBL:X60761 EMBL:X60762 EMBL:X71422
EMBL:X60395 IPI:IPI00989165 PIR:S16318 RefSeq:NP_032299.1
UniGene:Mm.207763 ProteinModelPortal:P23813 SMR:P23813
STRING:P23813 PRIDE:P23813 GeneID:15431 KEGG:mmu:15431
InParanoid:P23813 NextBio:288194 Bgee:P23813 CleanEx:MM_HOXD11
Genevestigator:P23813 GermOnline:ENSMUSG00000042499 Uniprot:P23813
Length = 323
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 42 ASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
A Q + KKR T Q++ LE+ F + + +++++L+ L L RQ+ +WFQNRR +
Sbjct: 247 APQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRR--M 304
Query: 101 KSKELERD 108
K K+L RD
Sbjct: 305 KEKKLNRD 312
>MGI|MGI:108011 [details] [associations]
symbol:Nobox "NOBOX oogenesis homeobox" species:10090 "Mus
musculus" [GO:0001541 "ovarian follicle development" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:108011 GO:GO:0030154
GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0048477
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001541 HSSP:P06601 CTD:135935 eggNOG:NOG325494
HOGENOM:HOG000113810 HOVERGEN:HBG082039 EMBL:AY061761 EMBL:BC125280
EMBL:BC125282 EMBL:U65067 IPI:IPI00129357 RefSeq:NP_570939.1
UniGene:Mm.17715 ProteinModelPortal:Q8VIH1 SMR:Q8VIH1 STRING:Q8VIH1
PhosphoSite:Q8VIH1 PRIDE:Q8VIH1 Ensembl:ENSMUST00000031749
GeneID:18291 KEGG:mmu:18291 UCSC:uc009bsp.1
GeneTree:ENSGT00650000093445 InParanoid:Q8VIH1 OMA:PLLMDVP
OrthoDB:EOG4JQ3X2 NextBio:293732 Bgee:Q8VIH1 CleanEx:MM_NOBOX
Genevestigator:Q8VIH1 GermOnline:ENSMUSG00000029736 Uniprot:Q8VIH1
Length = 527
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 32/101 (31%), Positives = 56/101 (55%)
Query: 11 EDKTSTKRKQIYGREFQAMMDCLE--EEDCREEASQAT---EKKRRLTV--DQVKALEKN 63
E K + + I QA L E D ++E+ + T KK R DQ++ LE+
Sbjct: 95 ERKAESLKPSISAVPGQATAGSLNSHEGDLKKESLEVTCQFRKKTRTLYRSDQLEELERI 154
Query: 64 FEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKE 104
F+ D+ + D++ ++++ +G+ P++I VWFQNRRA+ + E
Sbjct: 155 FQEDHYPDSDKRHEISQMVGVTPQRIMVWFQNRRAKWRKVE 195
>UNIPROTKB|F1S1H4 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:QPPAPVW EMBL:CU928405
RefSeq:XP_003131424.2 Ensembl:ENSSSCT00000018915 GeneID:100516574
KEGG:ssc:100516574 Uniprot:F1S1H4
Length = 254
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 12 DKTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLE 71
+K ST+RK+ D E E S+A +++ T +Q++ LE F N L
Sbjct: 145 EKKSTRRKK-------ESSDNQENRGKPEAGSKARKERTAFTKEQLRELEAEFAHHNYLT 197
Query: 72 PDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
R+ ++A L L RQ+ VWFQNRR + K
Sbjct: 198 RLRRYEIAVNLDLSERQVKVWFQNRRMKWK 227
>UNIPROTKB|Q08727 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09302
HOVERGEN:HBG006088 CTD:3199 EMBL:X74323 IPI:IPI00584066 PIR:I50589
PIR:S35941 RefSeq:NP_990481.1 UniGene:Gga.524
ProteinModelPortal:Q08727 SMR:Q08727 GeneID:396055 KEGG:gga:396055
NextBio:20816115 Uniprot:Q08727
Length = 375
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 44/150 (29%), Positives = 69/150 (46%)
Query: 32 CLEEEDCREEASQATEKKRRL----TVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPR 87
CL +D E + RRL T Q+ LEK F + L R+V++A L L R
Sbjct: 123 CLSHKDPLEIPDSGSGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTER 182
Query: 88 QIAVWFQNRRARLKS----KELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAK 143
Q+ VWFQNRR + K KE + G K + D + ++ +E +AL + +
Sbjct: 183 QVKVWFQNRRMKHKRQTQCKENQNGEGKFKGSEDPEKAAEDD--EEEKALFEQALGTVSG 240
Query: 144 LCQENEETSHAVEAEAPVSEQSKNHVSSEN 173
E E +A + A +Q++N + E+
Sbjct: 241 ALLERE--GYAFQQNALSQQQAQNAHNGES 268
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 32/119 (26%), Positives = 62/119 (52%)
Query: 13 KTSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKR--RLTVDQVKALEKNFEVDNKL 70
+ S++ + + R + + +D +KKR R T Q++ LE F+
Sbjct: 76 RKSSRGEDVESRSESDNAEAVSGDDLDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHP 135
Query: 71 EPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELER-DYGLLKANYDALRLDYNNLQQ 128
+ +++ L+ L L PRQ+ WFQNRR ++K+ ++ER + LL+ D LR + ++++
Sbjct: 136 DEKQRLDLSRRLNLDPRQVKFWFQNRRTQMKT-QIERHENALLRQENDKLRAENMSVRE 193
>UNIPROTKB|H9KZ47 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
Length = 147
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 39 REEASQATEKKR-RLTVD--QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQN 95
R + + T++KR R T Q LEK F + L R++++A L L RQI +WFQN
Sbjct: 58 RMKRNGCTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQN 117
Query: 96 RRARLKSK 103
RR + K +
Sbjct: 118 RRMKWKKE 125
>ZFIN|ZDB-GENE-980526-40 [details] [associations]
symbol:eng2b "engrailed 2b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030901 "midbrain development"
evidence=IGI] [GO:0001708 "cell fate specification" evidence=IGI]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-40 GO:GO:0005634 GO:GO:0001708 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0000976 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 HSSP:P14653 EMBL:BC071290 IPI:IPI00512460
UniGene:Dr.498 ProteinModelPortal:Q6IQW3 SMR:Q6IQW3 STRING:Q6IQW3
InParanoid:Q6IQW3 ArrayExpress:Q6IQW3 Uniprot:Q6IQW3
Length = 261
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 47 EKKRR--LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+K+ R T +Q++ L+ F+ + L R+ LA+ELGL QI +WFQN+RA++K
Sbjct: 172 DKRPRTAFTAEQLQRLKNEFQNNRYLTEQRRQALAQELGLNESQIKIWFQNKRAKIK 228
>UNIPROTKB|E1B9U3 [details] [associations]
symbol:HOXD11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0001656 "metanephros development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0001759 GO:GO:0060351 KO:K09296 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
CTD:3237 EMBL:DAAA02004174 IPI:IPI01001832 RefSeq:NP_001193253.1
UniGene:Bt.87148 Ensembl:ENSBTAT00000054133 GeneID:613983
KEGG:bta:613983 NextBio:20898873 Uniprot:E1B9U3
Length = 337
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 42 ASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
A Q + KKR T Q++ LE+ F + + +++++L+ L L RQ+ +WFQNRR +
Sbjct: 261 APQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRR--M 318
Query: 101 KSKELERD 108
K K+L RD
Sbjct: 319 KEKKLNRD 326
>UNIPROTKB|G3V567 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V567 SMR:G3V567 Ensembl:ENST00000530373
ArrayExpress:G3V567 Bgee:G3V567 Uniprot:G3V567
Length = 128
Score = 97 (39.2 bits), Expect = 0.00012, P = 0.00012
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 39 REEASQATEKKRR-LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRR 97
R + + ++ R T +Q++ALEK FE + + + +LA ++ L +I VWF NRR
Sbjct: 2 RLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRR 61
Query: 98 ARLKSKELERD 108
A+ + +E R+
Sbjct: 62 AKWRREEKLRN 72
>UNIPROTKB|Q17QR5 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG270330 GeneTree:ENSGT00700000104097 HOGENOM:HOG000112172
EMBL:BC118220 IPI:IPI00717015 RefSeq:NP_001068929.1
UniGene:Bt.40769 ProteinModelPortal:Q17QR5 SMR:Q17QR5 PRIDE:Q17QR5
Ensembl:ENSBTAT00000008720 GeneID:510669 KEGG:bta:510669 CTD:440097
HOVERGEN:HBG104467 InParanoid:Q17QR5 OMA:GTRWAFQ OrthoDB:EOG4MPHQG
NextBio:20869558 Uniprot:Q17QR5
Length = 340
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 32/87 (36%), Positives = 51/87 (58%)
Query: 22 YGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKL-EPDRKVKLAE 80
+ RE ++++ L +E + + ++ + DQ KALEK F+ + + DRK KLA
Sbjct: 164 FARE-ESVLPLLTQEST-SKVRRGILRRAVFSEDQRKALEKMFQKQKYISKTDRK-KLAI 220
Query: 81 ELGLQPRQIAVWFQNRRARLK-SKELE 106
LGL+ Q+ +WFQNRR + + SKE E
Sbjct: 221 NLGLKESQVKIWFQNRRMKWRNSKEKE 247
>UNIPROTKB|E2RMK2 [details] [associations]
symbol:HOXD11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0001656 "metanephros development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0001759 GO:GO:0060351 KO:K09296 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
CTD:3237 OMA:SPCTKAT EMBL:AAEX03017786 RefSeq:XP_852429.1
Ensembl:ENSCAFT00000021317 GeneID:609973 KEGG:cfa:609973
NextBio:20895547 Uniprot:E2RMK2
Length = 340
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 42 ASQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARL 100
A Q + KKR T Q++ LE+ F + + +++++L+ L L RQ+ +WFQNRR +
Sbjct: 264 APQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRR--M 321
Query: 101 KSKELERD 108
K K+L RD
Sbjct: 322 KEKKLNRD 329
>ZFIN|ZDB-GENE-000328-5 [details] [associations]
symbol:hoxc9a "homeo box C9a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:2001213 "negative
regulation of vasculogenesis" evidence=IGI] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000328-5 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
HOGENOM:HOG000231180 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:BX005254 OMA:NNPVANW GO:GO:2001213 IPI:IPI00484007
UniGene:Dr.132199 SMR:A2BE65 Ensembl:ENSDART00000127384
InParanoid:A2BE65 Uniprot:A2BE65
Length = 270
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 43 SQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+++T KKR T Q LEK F + L DR+ ++A L L RQ+ +WFQNRR ++K
Sbjct: 199 ARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMK 258
Query: 102 SKELERD 108
E++
Sbjct: 259 KMNKEKN 265
>FB|FBgn0261723 [details] [associations]
symbol:Dbx "Dbx" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0048663 "neuron
fate commitment" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 EMBL:AE014296 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0048663
GeneTree:ENSGT00700000104097 eggNOG:NOG257690 RefSeq:NP_647677.2
UniGene:Dm.23633 ProteinModelPortal:Q9W064 SMR:Q9W064
MINT:MINT-921726 EnsemblMetazoa:FBtr0290136 GeneID:38254
KEGG:dme:Dmel_CG42234 UCSC:CG42234-RC CTD:38254 FlyBase:FBgn0261723
InParanoid:Q9W064 OMA:HPAFLTH OrthoDB:EOG4N02X7 PhylomeDB:Q9W064
GenomeRNAi:38254 NextBio:807751 ArrayExpress:Q9W064 Bgee:Q9W064
Uniprot:Q9W064
Length = 741
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 56 QVKALEKNFEVDNKL-EPDRKVKLAEELGLQPRQIAVWFQNRRARLK-SKELE 106
Q K LEK F+ + +PDRK KLAE LGL+ Q+ +WFQNRR + + SKE E
Sbjct: 445 QRKGLEKRFQQQKYISKPDRK-KLAERLGLKDSQVKIWFQNRRMKWRNSKERE 496
>ZFIN|ZDB-GENE-990415-130 [details] [associations]
symbol:hesx1 "homeo box (expressed in ES cells) 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-130 GO:GO:0005634 GO:GO:0043565 GO:GO:0030900
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 CTD:8820
HOVERGEN:HBG004226 KO:K09354 HSSP:P06601 eggNOG:KOG0490 EMBL:U65433
IPI:IPI00501189 RefSeq:NP_571424.1 UniGene:Dr.160293 UniGene:Dr.226
ProteinModelPortal:P79738 GeneID:30620 KEGG:dre:30620
InParanoid:P79738 NextBio:20806982 Uniprot:P79738
Length = 161
Score = 107 (42.7 bits), Expect = 0.00013, P = 0.00013
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 56 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLK 113
Q+K LE F+V++ D + +LA++L L +I +WFQNRRA+LK E + ++K
Sbjct: 91 QIKILESVFQVNSYPGIDIREELAKKLQLDEDRIQIWFQNRRAKLKRSHRESQFLMVK 148
>UNIPROTKB|J9NYN6 [details] [associations]
symbol:HOXD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 OMA:GDGAFVS EMBL:AAEX03017793
Ensembl:ENSCAFT00000048782 Uniprot:J9NYN6
Length = 248
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 42 ASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
AS ++ + + Q+ LEK F + L R++++A L L Q+ +WFQNRR +K
Sbjct: 146 ASPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRR--MK 203
Query: 102 SKELERDYGLLKAN 115
K+ ER+ GLL ++
Sbjct: 204 QKKRERE-GLLPSH 216
>MGI|MGI:1342288 [details] [associations]
symbol:Lbx2 "ladybird homeobox homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1342288 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 HSSP:P13297
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 CTD:85474
eggNOG:NOG235470 OMA:MVPRAPS EMBL:AF146150 EMBL:AK002897
EMBL:BC109347 IPI:IPI00624409 RefSeq:NP_034822.1 UniGene:Mm.20359
ProteinModelPortal:Q9WUN8 SMR:Q9WUN8 PhosphoSite:Q9WUN8
PRIDE:Q9WUN8 Ensembl:ENSMUST00000041265 GeneID:16815 KEGG:mmu:16815
UCSC:uc009cmi.1 InParanoid:Q9WUN8 OrthoDB:EOG4NKBWK NextBio:290696
Bgee:Q9WUN8 CleanEx:MM_LBX2 Genevestigator:Q9WUN8 Uniprot:Q9WUN8
Length = 195
Score = 111 (44.1 bits), Expect = 0.00014, P = 0.00014
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 47 EKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKS--KE 104
+ + T QV LE+ F L P + LA LGL Q+ WFQNRRA+LK +E
Sbjct: 86 KSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLKRDVEE 145
Query: 105 LERDYGLL 112
+ D L
Sbjct: 146 MRADVASL 153
>ZFIN|ZDB-GENE-000823-2 [details] [associations]
symbol:hoxa9b "homeo box A9b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-2 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AL645795 HOVERGEN:HBG016849 HOGENOM:HOG000231180
OrthoDB:EOG4D26QZ InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:AF071249 EMBL:BC095300 EMBL:DQ060537 IPI:IPI00498950
RefSeq:NP_571608.1 UniGene:Dr.88308 ProteinModelPortal:Q9YGT5
SMR:Q9YGT5 STRING:Q9YGT5 GeneID:58048 KEGG:dre:58048 CTD:58048
eggNOG:NOG261069 NextBio:20892312 ArrayExpress:Q9YGT5
Uniprot:Q9YGT5
Length = 253
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 43 SQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+++T KKR T Q LEK F + L DR+ ++A L L RQ+ +WFQNRR ++K
Sbjct: 184 AKSTRKKRCPYTKHQTLELEKEFLFNMYLSRDRRYEVARLLNLTERQVKIWFQNRRMKMK 243
Query: 102 SKELER 107
+R
Sbjct: 244 KCNKDR 249
>ZFIN|ZDB-GENE-050114-3 [details] [associations]
symbol:lmx1ba "LIM homeobox transcription factor 1,
beta a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0030902
"hindbrain development" evidence=IMP] [GO:0021592 "fourth ventricle
development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0061386 "closure of optic fissure" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-050114-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0060041 GeneTree:ENSGT00700000104050 GO:GO:0030917
GO:GO:0061386 HOGENOM:HOG000231629 GO:GO:0021592 HOVERGEN:HBG052335
EMBL:BX511196 EMBL:CABZ01060115 EMBL:CABZ01060116 EMBL:CABZ01060117
EMBL:CABZ01060118 EMBL:CABZ01060119 EMBL:CABZ01084097
EMBL:CABZ01084098 EMBL:CABZ01084099 EMBL:CABZ01084100 EMBL:AY551078
IPI:IPI00616332 UniGene:Dr.94065 Ensembl:ENSDART00000126544
Uniprot:Q4L1M5
Length = 375
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 52 LTVDQVKALEKNFEVDNKLEPDRKVK--LAEELGLQPRQIAVWFQNRRARLKSKELERDY 109
LT Q +A + +FEV +K P RKV+ LA E GL R + VWFQN+RA++K +
Sbjct: 199 LTTQQRRAFKASFEVSSK--PCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQ 256
Query: 110 GLLKANYDALRLDYNNLQQEN 130
+ N L D + + EN
Sbjct: 257 QQEQQNSQRLGQDVMSSRMEN 277
>UNIPROTKB|F1NJG5 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
IPI:IPI00583350 OMA:SWLEPAP EMBL:AADN02000988
Ensembl:ENSGALT00000019407 Uniprot:F1NJG5
Length = 254
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 43 SQATEKKR-RLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLK 101
+++T KKR T Q LEK F + L DR+ ++A L L RQ+ +WFQNRR +K
Sbjct: 185 ARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRR--MK 242
Query: 102 SKELERD 108
K++ +D
Sbjct: 243 MKKINKD 249
>UNIPROTKB|E2RFP2 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
EMBL:AAEX03006431 RefSeq:XP_848980.1 ProteinModelPortal:E2RFP2
Ensembl:ENSCAFT00000022993 GeneID:607271 KEGG:cfa:607271
NextBio:20893009 Uniprot:E2RFP2
Length = 254
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 14 TSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPD 73
T+++ ++ R + D E E S+A +++ T +Q++ LE F N L
Sbjct: 140 TASEMEKKSSRRKKESSDNQESRGKPEGGSKARKERTAFTKEQLRELEAEFAHHNYLTRL 199
Query: 74 RKVKLAEELGLQPRQIAVWFQNRRARLK 101
R+ ++A L L RQ+ VWFQNRR + K
Sbjct: 200 RRYEIAVNLDLSERQVKVWFQNRRMKWK 227
>UNIPROTKB|P50221 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH471178 GO:GO:0001757 EMBL:AC068675 EMBL:U10492 EMBL:U10493
EMBL:AC004149 EMBL:BC069474 EMBL:BC069506 IPI:IPI00030728
PIR:I38034 RefSeq:NP_001035091.1 RefSeq:NP_004518.1
RefSeq:NP_054705.1 UniGene:Hs.438 ProteinModelPortal:P50221
SMR:P50221 IntAct:P50221 MINT:MINT-202809 STRING:P50221
DMDM:1709078 PRIDE:P50221 DNASU:4222 Ensembl:ENST00000318579
Ensembl:ENST00000329168 GeneID:4222 KEGG:hsa:4222 UCSC:uc002idz.3
CTD:4222 GeneCards:GC17M041728 HGNC:HGNC:7013 HPA:HPA045214
MIM:600147 neXtProt:NX_P50221 PharmGKB:PA30747 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 InParanoid:P50221 KO:K09322
OMA:QPPAPVW OrthoDB:EOG46DM3J PhylomeDB:P50221 GenomeRNAi:4222
NextBio:16659 ArrayExpress:P50221 Bgee:P50221 CleanEx:HS_MEOX1
Genevestigator:P50221 GermOnline:ENSG00000005102 Uniprot:P50221
Length = 254
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 14 TSTKRKQIYGREFQAMMDCLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPD 73
T+ + ++ R + D E E +S+A +++ T +Q++ LE F N L
Sbjct: 140 TANETEKKSSRRRKESSDNQENRGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRL 199
Query: 74 RKVKLAEELGLQPRQIAVWFQNRRARLK 101
R+ ++A L L RQ+ VWFQNRR + K
Sbjct: 200 RRYEIAVNLDLSERQVKVWFQNRRMKWK 227
>RGD|1310884 [details] [associations]
symbol:Barx1 "BARX homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA;ISO]
[GO:0009888 "tissue development" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0030855 "epithelial cell differentiation"
evidence=IEA;ISO] [GO:0048513 "organ development" evidence=ISO]
[GO:0048536 "spleen development" evidence=IEA;ISO] [GO:0048856
"anatomical structure development" evidence=ISO] [GO:0055123
"digestive system development" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1310884 GO:GO:0005634 GO:GO:0009952 GO:GO:0007267
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048536 GO:GO:0000976 GO:GO:0030178 CTD:56033
GeneTree:ENSGT00700000104097 KO:K09361 OrthoDB:EOG4BZN3J
OMA:ARPFHSH GO:GO:0055123 GO:GO:0030855 EMBL:CH473977
IPI:IPI00187717 RefSeq:NP_001102350.1 UniGene:Rn.12744
Ensembl:ENSRNOT00000022830 GeneID:364680 KEGG:rno:364680
NextBio:685809 Uniprot:D3ZA67
Length = 254
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 40/115 (34%), Positives = 56/115 (48%)
Query: 33 LEEEDCREEASQATEKKRRLTVD---QVKALEKNFEVDNKLE-PDRKVKLAEELGLQPRQ 88
LE E ++A + +R TV Q+ LEK FE L PDR + LAE LGL Q
Sbjct: 127 LEAAGSGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDR-IDLAESLGLSQLQ 185
Query: 89 IAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAK 143
+ W+QNRR + K L+ GL R N++ +E LT + R +A+
Sbjct: 186 VKTWYQNRRMKWKKIVLQGG-GLESPTKPKGRPKKNSIPT-SEQLTEQERAKEAE 238
>UNIPROTKB|F1LRM4 [details] [associations]
symbol:Dbx2 "Protein Dbx2" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 CTD:440097
IPI:IPI00387767 RefSeq:XP_001053826.1 RefSeq:XP_001058743.1
UniGene:Rn.93216 Ensembl:ENSRNOT00000009143 GeneID:541457
KEGG:rno:541457 RGD:1359605 NextBio:714075 Uniprot:F1LRM4
Length = 377
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 36 EDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQN 95
+D +A + ++ + DQ KALEK F+ + + KLA LGL+ Q+ +WFQN
Sbjct: 217 QDSNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRRKLAISLGLKESQVKIWFQN 276
Query: 96 RRARLK-SKELE 106
RR + + SKE E
Sbjct: 277 RRMKWRNSKEKE 288
>UNIPROTKB|E1BLB9 [details] [associations]
symbol:E1BLB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 OMA:CTEAGRD
GO:GO:0003170 EMBL:DAAA02002472 IPI:IPI00838807 UniGene:Bt.59425
Ensembl:ENSBTAT00000044731 NextBio:20874258 Uniprot:E1BLB9
Length = 331
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 35 EEDCR--EEASQATEKKRR----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQ 88
+ED + E+ Q K+RR T++Q+ LE+ F+ + + + +L++ LGL +
Sbjct: 124 KEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 183
Query: 89 IAVWFQNRRARLKSKELERDYGLL---KANYDALRL-DYNNL-------QQENEALTAEL 137
+ VWFQNRRA+ + +E + G+L + ++A R+ Y N+ QQ++ L
Sbjct: 184 VQVWFQNRRAKCRKQENQLHKGVLIGAASQFEACRVAPYVNVGALRMPFQQDSHCNVTPL 243
Query: 138 R-ELKAKLCQENEETSHA 154
+++A+L Q + +HA
Sbjct: 244 SFQVQAQL-QLDSAVAHA 260
>UNIPROTKB|O60902 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0002063 "chondrocyte development" evidence=IEA] [GO:0003170
"heart valve development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0007507 "heart
development" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0007399 GO:GO:0007507 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
EMBL:AJ002367 EMBL:AJ002368 EMBL:BC008829 EMBL:AF022654
EMBL:AF023203 IPI:IPI00218369 IPI:IPI00295006 IPI:IPI00793628
RefSeq:NP_001157150.1 RefSeq:NP_003021.3 RefSeq:NP_006875.2
UniGene:Hs.55967 ProteinModelPortal:O60902 SMR:O60902 IntAct:O60902
STRING:O60902 PhosphoSite:O60902 PaxDb:O60902 PRIDE:O60902
DNASU:6474 Ensembl:ENST00000389589 Ensembl:ENST00000425436
GeneID:6474 KEGG:hsa:6474 UCSC:uc003fbr.3 UCSC:uc003fbs.3
UCSC:uc010hvw.3 CTD:6474 GeneCards:GC03M157813 HGNC:HGNC:10854
MIM:602504 neXtProt:NX_O60902 PharmGKB:PA35756 eggNOG:NOG113578
HOVERGEN:HBG007233 InParanoid:O60902 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 GenomeRNAi:6474 NextBio:25151 ArrayExpress:O60902
Bgee:O60902 CleanEx:HS_SHOX2 Genevestigator:O60902
GermOnline:ENSG00000168779 Uniprot:O60902
Length = 331
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 35 EEDCR--EEASQATEKKRR----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQ 88
+ED + E+ Q K+RR T++Q+ LE+ F+ + + + +L++ LGL +
Sbjct: 124 KEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 183
Query: 89 IAVWFQNRRARLKSKELERDYGLL---KANYDALRL-DYNNL-------QQENEALTAEL 137
+ VWFQNRRA+ + +E + G+L + ++A R+ Y N+ QQ++ L
Sbjct: 184 VQVWFQNRRAKCRKQENQLHKGVLIGAASQFEACRVAPYVNVGALRMPFQQDSHCNVTPL 243
Query: 138 R-ELKAKLCQENEETSHA 154
+++A+L Q + +HA
Sbjct: 244 SFQVQAQL-QLDSAVAHA 260
>UNIPROTKB|E2QZN5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 Ensembl:ENSCAFT00000014128 Uniprot:E2QZN5
Length = 334
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 35 EEDCR--EEASQATEKKRR----LTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQ 88
+ED + E+ Q K+RR T++Q+ LE+ F+ + + + +L++ LGL +
Sbjct: 127 KEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEAR 186
Query: 89 IAVWFQNRRARLKSKELERDYGLL---KANYDALRL-DYNNL-------QQENEALTAEL 137
+ VWFQNRRA+ + +E + G+L + ++A R+ Y N+ QQ++ L
Sbjct: 187 VQVWFQNRRAKCRKQENQLHKGVLIGAASQFEACRVAPYVNVGALRMPFQQDSHCNVTPL 246
Query: 138 R-ELKAKLCQENEETSHA 154
+++A+L Q + +HA
Sbjct: 247 SFQVQAQL-QLDSAVAHA 263
WARNING: HSPs involving 258 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.127 0.358 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 255 234 0.00087 113 3 11 23 0.47 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 508
No. of states in DFA: 612 (65 KB)
Total size of DFA: 194 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.34u 0.18s 31.52t Elapsed: 00:00:01
Total cpu time: 31.37u 0.18s 31.55t Elapsed: 00:00:01
Start: Fri May 10 01:03:41 2013 End: Fri May 10 01:03:42 2013
WARNINGS ISSUED: 2