Query 025269
Match_columns 255
No_of_seqs 141 out of 1086
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 04:09:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025269.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025269hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02485 oxidoreductase 100.0 3E-59 6.4E-64 405.4 23.2 250 1-252 1-252 (329)
2 COG3491 PcbC Isopenicillin N s 100.0 3E-58 6.5E-63 379.1 21.1 232 5-252 3-237 (322)
3 PTZ00273 oxidase reductase; Pr 100.0 1.5E-55 3.2E-60 381.1 21.4 234 5-252 3-241 (320)
4 PLN03002 oxidoreductase, 2OG-F 100.0 4.4E-54 9.5E-59 372.6 22.5 227 4-252 11-250 (332)
5 PLN02216 protein SRG1 100.0 3.9E-54 8.4E-59 375.8 20.1 222 6-252 51-273 (357)
6 PLN02758 oxidoreductase, 2OG-F 100.0 6.1E-54 1.3E-58 375.1 21.0 225 5-253 50-276 (361)
7 PLN02276 gibberellin 20-oxidas 100.0 5E-54 1.1E-58 375.9 20.4 229 6-252 39-268 (361)
8 PLN02750 oxidoreductase, 2OG-F 100.0 1.2E-53 2.6E-58 371.9 21.6 227 5-252 24-257 (345)
9 PLN00417 oxidoreductase, 2OG-F 100.0 4.8E-53 1E-57 367.7 21.3 224 5-252 42-266 (348)
10 PLN02515 naringenin,2-oxogluta 100.0 4.4E-53 9.5E-58 368.7 21.1 220 7-252 37-259 (358)
11 PLN03178 leucoanthocyanidin di 100.0 4.5E-53 9.8E-58 370.0 20.5 225 5-252 45-273 (360)
12 PLN02254 gibberellin 3-beta-di 100.0 5.4E-53 1.2E-57 368.1 20.4 213 6-252 55-273 (358)
13 PLN02997 flavonol synthase 100.0 1.8E-52 3.8E-57 360.8 21.4 213 6-252 31-245 (325)
14 PLN02299 1-aminocyclopropane-1 100.0 1.8E-52 3.9E-57 360.4 20.5 218 1-252 1-221 (321)
15 PLN02912 oxidoreductase, 2OG-F 100.0 1.8E-52 3.8E-57 364.2 20.6 219 5-252 39-259 (348)
16 PLN02393 leucoanthocyanidin di 100.0 6.7E-52 1.5E-56 362.6 20.8 225 5-253 49-277 (362)
17 PLN02947 oxidoreductase 100.0 1.4E-51 3E-56 360.9 21.2 221 5-253 64-288 (374)
18 PLN02904 oxidoreductase 100.0 2.8E-51 6E-56 357.5 21.1 219 6-252 50-270 (357)
19 PLN02704 flavonol synthase 100.0 2.1E-51 4.7E-56 356.4 19.1 220 4-252 39-261 (335)
20 PLN02639 oxidoreductase, 2OG-F 100.0 3.7E-51 8.1E-56 355.2 20.6 216 6-252 36-253 (337)
21 KOG0143 Iron/ascorbate family 100.0 5.3E-50 1.1E-54 344.1 21.8 223 6-252 16-240 (322)
22 PLN02156 gibberellin 2-beta-di 100.0 1.7E-49 3.6E-54 343.0 20.2 214 7-252 26-243 (335)
23 PLN02984 oxidoreductase, 2OG-F 100.0 1.4E-49 3E-54 344.3 19.2 213 7-252 38-262 (341)
24 PLN02403 aminocyclopropanecarb 100.0 3.1E-49 6.8E-54 337.2 20.3 212 7-252 2-217 (303)
25 PLN02365 2-oxoglutarate-depend 100.0 4.9E-49 1.1E-53 336.8 19.9 210 1-252 1-214 (300)
26 PLN03001 oxidoreductase, 2OG-F 100.0 2.2E-38 4.8E-43 265.3 13.2 172 64-252 2-178 (262)
27 PF14226 DIOX_N: non-haem diox 99.9 2.7E-27 5.9E-32 175.6 7.9 115 8-137 1-116 (116)
28 PLN03176 flavanone-3-hydroxyla 99.8 1.2E-19 2.6E-24 134.3 9.9 80 6-94 36-115 (120)
29 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.3 4E-12 8.8E-17 91.1 4.4 60 184-253 2-64 (98)
30 smart00702 P4Hc Prolyl 4-hydro 87.0 3.8 8.3E-05 32.0 7.5 80 154-251 59-152 (178)
31 PF13640 2OG-FeII_Oxy_3: 2OG-F 85.1 0.51 1.1E-05 33.2 1.4 45 208-252 11-76 (100)
32 PRK08333 L-fuculose phosphate 75.0 4.4 9.5E-05 32.1 3.8 37 7-56 120-156 (184)
33 PF07350 DUF1479: Protein of u 75.0 3.9 8.4E-05 36.8 3.8 53 6-72 48-100 (416)
34 PRK08130 putative aldolase; Va 74.6 4.6 0.0001 32.8 4.0 25 32-56 139-163 (213)
35 TIGR02409 carnitine_bodg gamma 72.5 6.5 0.00014 34.8 4.7 52 6-72 108-159 (366)
36 PRK05874 L-fuculose-phosphate 67.0 8 0.00017 31.6 3.8 25 32-56 139-163 (217)
37 PRK05467 Fe(II)-dependent oxyg 66.2 30 0.00064 28.6 6.9 26 227-252 129-155 (226)
38 PRK08087 L-fuculose phosphate 62.1 12 0.00025 30.5 3.9 25 32-56 134-158 (215)
39 PRK08660 L-fuculose phosphate 62.1 13 0.00028 29.3 4.1 25 32-56 126-150 (181)
40 PF00596 Aldolase_II: Class II 61.8 6.3 0.00014 31.0 2.2 38 6-56 122-160 (184)
41 PRK06833 L-fuculose phosphate 59.5 12 0.00026 30.5 3.5 25 32-56 136-160 (214)
42 PRK03634 rhamnulose-1-phosphat 55.2 17 0.00036 31.0 3.8 25 32-56 191-215 (274)
43 COG1402 Uncharacterized protei 54.3 49 0.0011 27.7 6.3 43 30-72 87-132 (250)
44 TIGR01086 fucA L-fuculose phos 53.9 16 0.00035 29.7 3.4 25 32-56 133-157 (214)
45 PF11548 Receptor_IA-2: Protei 52.9 17 0.00037 25.3 2.8 36 155-190 18-53 (91)
46 PRK06755 hypothetical protein; 51.3 21 0.00045 29.1 3.6 37 7-56 136-172 (209)
47 PRK06357 hypothetical protein; 51.1 27 0.00058 28.5 4.3 25 32-56 142-172 (216)
48 PLN00052 prolyl 4-hydroxylase; 50.4 97 0.0021 26.9 7.7 13 237-249 205-217 (310)
49 TIGR02624 rhamnu_1P_ald rhamnu 49.3 28 0.00062 29.5 4.3 25 32-56 189-213 (270)
50 PRK06557 L-ribulose-5-phosphat 48.4 20 0.00044 29.2 3.2 25 32-56 142-168 (221)
51 PRK09553 tauD taurine dioxygen 47.7 38 0.00082 28.7 4.9 39 32-73 27-65 (277)
52 PF11243 DUF3045: Protein of u 47.2 17 0.00037 24.4 2.0 22 35-56 35-56 (89)
53 TIGR03328 salvage_mtnB methylt 44.7 31 0.00066 27.5 3.6 25 32-56 137-164 (193)
54 TIGR02410 carnitine_TMLD trime 44.2 40 0.00087 29.8 4.6 52 7-72 100-151 (362)
55 cd00398 Aldolase_II Class II A 40.3 22 0.00047 28.7 2.2 39 7-56 122-160 (209)
56 PF01471 PG_binding_1: Putativ 39.0 49 0.0011 20.2 3.2 41 34-74 4-44 (57)
57 PF12851 Tet_JBP: Oxygenase do 38.6 56 0.0012 25.6 4.2 46 208-253 86-143 (171)
58 PRK05834 hypothetical protein; 37.4 46 0.00099 26.7 3.6 24 33-56 136-161 (194)
59 PRK07490 hypothetical protein; 36.5 43 0.00093 27.9 3.4 25 32-56 146-170 (245)
60 PF08823 PG_binding_2: Putativ 34.9 69 0.0015 21.3 3.5 37 32-68 15-51 (74)
61 cd00379 Ribosomal_L10_P0 Ribos 33.2 1.5E+02 0.0032 22.4 5.7 39 31-69 3-42 (155)
62 PF01113 DapB_N: Dihydrodipico 32.4 91 0.002 22.7 4.3 37 33-69 78-115 (124)
63 PF03668 ATP_bind_2: P-loop AT 31.1 72 0.0016 27.3 3.9 30 38-69 17-46 (284)
64 TIGR00568 alkb DNA alkylation 30.3 79 0.0017 24.7 3.7 55 185-252 96-160 (169)
65 PF02633 Creatininase: Creatin 29.9 1.3E+02 0.0029 24.7 5.3 38 30-67 83-123 (237)
66 COG1010 CobJ Precorrin-3B meth 28.4 1.8E+02 0.0039 24.2 5.5 51 7-69 129-182 (249)
67 cd00250 CAS_like Clavaminic ac 27.9 1.1E+02 0.0024 25.4 4.5 49 7-70 18-66 (262)
68 PRK06754 mtnB methylthioribulo 27.9 58 0.0013 26.3 2.7 25 32-56 148-173 (208)
69 PRK09220 methylthioribulose-1- 27.9 66 0.0014 25.9 3.1 25 32-56 145-172 (204)
70 PRK15331 chaperone protein Sic 27.8 61 0.0013 25.3 2.7 43 30-73 8-50 (165)
71 PRK07044 aldolase II superfami 27.3 87 0.0019 26.2 3.8 25 32-56 151-175 (252)
72 PRK04596 minC septum formation 26.9 1.6E+02 0.0035 24.7 5.2 48 6-63 49-97 (248)
73 PRK02289 4-oxalocrotonate taut 26.5 1E+02 0.0022 19.2 3.2 25 151-175 16-40 (60)
74 PF01361 Tautomerase: Tautomer 26.4 1.1E+02 0.0023 18.9 3.3 25 151-175 15-39 (60)
75 PF02668 TauD: Taurine catabol 26.1 1.3E+02 0.0028 24.5 4.6 35 33-70 24-58 (258)
76 COG0289 DapB Dihydrodipicolina 25.5 1.9E+02 0.0042 24.4 5.4 37 33-69 80-117 (266)
77 PRK06208 hypothetical protein; 24.6 72 0.0016 27.1 2.8 25 32-56 177-201 (274)
78 cd05797 Ribosomal_L10 Ribosoma 24.3 2.8E+02 0.006 21.1 5.9 40 30-69 4-44 (157)
79 PRK06661 hypothetical protein; 24.3 71 0.0015 26.3 2.7 25 32-56 137-161 (231)
80 PF08699 DUF1785: Domain of un 24.2 28 0.00061 21.4 0.2 24 228-251 19-42 (52)
81 PRK06486 hypothetical protein; 23.0 79 0.0017 26.7 2.7 25 32-56 162-186 (262)
82 TIGR00013 taut 4-oxalocrotonat 22.7 1.4E+02 0.003 18.5 3.3 25 151-175 16-40 (63)
83 PRK01964 4-oxalocrotonate taut 22.6 1.2E+02 0.0027 18.9 3.1 26 150-175 15-40 (64)
84 PRK02220 4-oxalocrotonate taut 22.2 1.3E+02 0.0028 18.5 3.0 25 151-175 16-40 (61)
85 PRK04516 minC septum formation 21.7 2.7E+02 0.0059 23.1 5.5 46 5-61 44-90 (235)
86 PF06708 DUF1195: Protein of u 21.6 2.1E+02 0.0046 21.6 4.4 38 28-71 87-124 (157)
87 cd00491 4Oxalocrotonate_Tautom 21.2 1.5E+02 0.0033 17.8 3.3 26 150-175 14-39 (58)
88 KOG3571 Dishevelled 3 and rela 21.0 33 0.00072 31.6 0.1 41 205-247 383-423 (626)
89 PRK00099 rplJ 50S ribosomal pr 20.8 3.5E+02 0.0076 20.9 5.9 41 29-69 4-45 (172)
90 PF00356 LacI: Bacterial regul 20.6 1E+02 0.0022 18.3 2.2 19 30-48 26-44 (46)
91 PF03460 NIR_SIR_ferr: Nitrite 20.6 1.7E+02 0.0036 18.6 3.4 38 32-69 23-68 (69)
92 PF12368 DUF3650: Protein of u 20.6 48 0.001 17.6 0.6 17 48-64 9-25 (28)
93 TIGR03677 rpl7ae 50S ribosomal 20.3 2E+02 0.0044 20.9 4.1 36 35-70 78-116 (117)
94 PRK00745 4-oxalocrotonate taut 20.2 1.5E+02 0.0033 18.3 3.1 25 151-175 16-40 (62)
95 PF05338 DUF717: Protein of un 20.2 82 0.0018 19.7 1.7 19 62-80 5-23 (55)
No 1
>PLN02485 oxidoreductase
Probab=100.00 E-value=3e-59 Score=405.37 Aligned_cols=250 Identities=71% Similarity=1.228 Sum_probs=207.2
Q ss_pred CCCCCCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhc
Q 025269 1 MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIK 80 (255)
Q Consensus 1 m~~~~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~ 80 (255)
|++++..||||||+.+.++.+++....+..+++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|++
T Consensus 1 ~~~~~~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~ 80 (329)
T PLN02485 1 MATDFKSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLK 80 (329)
T ss_pred CCCCCCCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHh
Confidence 89999999999999986532222111123567899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 025269 81 IKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIM 160 (255)
Q Consensus 81 ~~~~~~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll 160 (255)
+.......++||.+.+++...+..|++|.|.++++..+........+..++|.||+.+++||+.+++|++.|.+++.+||
T Consensus 81 ~~~~~~~~~rGY~~~g~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll 160 (329)
T PLN02485 81 IKMTPAAGYRGYQRIGENVTKGKPDMHEAIDCYREFKPGKYGDLGKVMEGPNQWPENPQEFKALMEEYIKLCTDLSRKIL 160 (329)
T ss_pred hcccCCCCCCCcccccccccCCCCCcchhhhhcccCCCCcccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 87655556899999887766677899999998765433222222234467899999889999999999999999999999
Q ss_pred HHHHHHcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEc--CCee
Q 025269 161 RGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQF--HLLL 238 (255)
Q Consensus 161 ~~i~~~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~--~~w~ 238 (255)
++|+++||+++++|.+.+.+++.+.||++|||+++.... .++..+|+++|||+|+||||+|++.++||||++ ++|+
T Consensus 161 ~~~a~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~--~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi 238 (329)
T PLN02485 161 RGIALALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNG--PPENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWI 238 (329)
T ss_pred HHHHHHcCCChHHhhhhhccCccceEEEEeCCCCccccC--CcccCcccccccCCCeEEEEeccCCCCeeeEEcCCCcEE
Confidence 999999999998887665455677899999999974211 234678999999999999999974589999985 4799
Q ss_pred ecCCCCCceeecCC
Q 025269 239 LVPGLGGSMDFHDS 252 (255)
Q Consensus 239 ~V~~~~g~l~Vn~~ 252 (255)
+|||+||++|||.|
T Consensus 239 ~V~p~pg~~vVNiG 252 (329)
T PLN02485 239 WAIPIPGTFVCNIG 252 (329)
T ss_pred ECCCCCCcEEEEhH
Confidence 99999999999976
No 2
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=3e-58 Score=379.09 Aligned_cols=232 Identities=37% Similarity=0.613 Sum_probs=208.7
Q ss_pred CCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccC
Q 025269 5 FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLT 84 (255)
Q Consensus 5 ~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~ 84 (255)
...||+|||+.+..+ + +.+|..++++|++||+++|||||+||||+.++++++++++++||+||.|+|.++...
T Consensus 3 ~~~lp~idls~~~~~--~-----~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~ 75 (322)
T COG3491 3 TRDLPIIDLSELAGS--D-----PGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMV 75 (322)
T ss_pred CCcCceeccHHhcCC--C-----cHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHh
Confidence 358999999998753 1 357899999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCccceecccccccCCCCcchhhhchhccccCccc-ccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 025269 85 PATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYG-ALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGI 163 (255)
Q Consensus 85 ~~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~-~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i 163 (255)
.+..+|||.+.+.|..+|..|++|.++++.+....... ....+++++|.|| .+++||+.+..|+++|.+++.+||++|
T Consensus 76 ~~~~~rGY~~~~~E~t~g~~d~kE~~d~g~~~~~~~~~~~~~~~~~gpN~wP-~ip~~r~~ll~~~~~~~~~~~rLL~ai 154 (322)
T COG3491 76 LGRQHRGYTPHGGELTDGEPDYKEGLDMGPDLDAELAGVRAGTPLHGPNLWP-AIPGLRDALLQYYRAMTAVGLRLLRAI 154 (322)
T ss_pred cCccccccccCcccccCCccchhhhcccccccccccCCCccCCCcCCCCCCc-cchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76779999999999999999999999999886533222 3456788999999 789999999999999999999999999
Q ss_pred HHHcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC--CeeecC
Q 025269 164 ALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH--LLLLVP 241 (255)
Q Consensus 164 ~~~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~--~w~~V~ 241 (255)
|++|+|++++|... .+++.+++|++|||+.+. ..+.-+.|+|||+|+||||+|| +++||||+++ .|++||
T Consensus 155 A~~LdL~~d~Fd~~-~~d~~~~~RLlrYP~~~~------~~~~~~~GaHtD~G~lTLl~Qd-~~~GLqv~~~~g~Wl~v~ 226 (322)
T COG3491 155 ALGLDLPEDFFDKR-TSDPNSVLRLLRYPSRPA------REGADGVGAHTDYGLLTLLFQD-DVGGLEVRPPNGGWLDVP 226 (322)
T ss_pred HHHcCCChhhhhhc-cCCchheEEEEecCCCcc------cccccccccccCCCeEEEEEec-ccCCeEEecCCCCeeECC
Confidence 99999999999988 478999999999998874 4556677999999999999999 7999999997 599999
Q ss_pred CCCCceeecCC
Q 025269 242 GLGGSMDFHDS 252 (255)
Q Consensus 242 ~~~g~l~Vn~~ 252 (255)
|+||+|+||-+
T Consensus 227 P~pgtlvVNiG 237 (322)
T COG3491 227 PIPGTLVVNIG 237 (322)
T ss_pred CCCCeEEEeHH
Confidence 99999999964
No 3
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=1.5e-55 Score=381.07 Aligned_cols=234 Identities=33% Similarity=0.522 Sum_probs=197.2
Q ss_pred CCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccC
Q 025269 5 FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLT 84 (255)
Q Consensus 5 ~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~ 84 (255)
.++||||||+.+.++ + ..++++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++...
T Consensus 3 ~~~iPvIDl~~~~~~--~-----~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~ 75 (320)
T PTZ00273 3 RASLPVIDVSPLFGG--E-----SAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIR 75 (320)
T ss_pred CCCCCEEecHHhcCC--C-----hHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC
Confidence 358999999998753 2 235778999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCccceecccccc--cCCCCcchhhhchhccccCccc-ccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 025269 85 PATGYRGYQRIGENIT--KGIPDMHEAIDCYKEIQEGMYG-ALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMR 161 (255)
Q Consensus 85 ~~~~~~GY~~~~~~~~--~g~~d~~E~~~~~~~~~~~~~~-~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~ 161 (255)
.+..++||.+.+.+.. .+..|++|.|.++...+..... ....++.++|.||+.+++||+.+++|++.|.+++..||+
T Consensus 76 ~~~~~~GY~~~~~e~~~~~~~~d~kE~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~ 155 (320)
T PTZ00273 76 KSRLHRGYGAFGAEQLDPSKPYDYKETFDMGCHLPKDHPDVMAGKPLRGPNNHPTQVEGWMELMETHYRDMQALALVLLR 155 (320)
T ss_pred CCCCCCCCCCccccccCCCCCCCccceEEeeccCCcccchhhccccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556899998775543 2356999999987543221111 112345678999988899999999999999999999999
Q ss_pred HHHHHcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEc--CCeee
Q 025269 162 GIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQF--HLLLL 239 (255)
Q Consensus 162 ~i~~~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~--~~w~~ 239 (255)
+|+++||+++++|.+.+ +.+.+.||++|||+++. .++..+|+++|||+|+||||+|| .++||||++ ++|++
T Consensus 156 ~la~~Lgl~~~~f~~~~-~~~~~~lrl~~YP~~~~-----~~~~~~g~~~HTD~g~lTlL~qd-~~~GLqV~~~~g~Wi~ 228 (320)
T PTZ00273 156 ALALAIGLREDFFDSKF-MEPLSVFRMKHYPALPQ-----TKKGRTVCGEHTDYGIITLLYQD-SVGGLQVRNLSGEWMD 228 (320)
T ss_pred HHHHHhCcCHHHHHHhh-CCCcceeeeeecCCCCC-----ccccCcccccccCCCeEEEEecC-CCCceEEECCCCCEEe
Confidence 99999999999998876 45668899999999974 23468899999999999999998 699999986 47999
Q ss_pred cCCCCCceeecCC
Q 025269 240 VPGLGGSMDFHDS 252 (255)
Q Consensus 240 V~~~~g~l~Vn~~ 252 (255)
|||+||+||||.|
T Consensus 229 V~p~pg~lvVNvG 241 (320)
T PTZ00273 229 VPPLEGSFVVNIG 241 (320)
T ss_pred CCCCCCeEEEEHH
Confidence 9999999999976
No 4
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4.4e-54 Score=372.55 Aligned_cols=227 Identities=30% Similarity=0.478 Sum_probs=188.0
Q ss_pred CCCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhcccc
Q 025269 4 DFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKL 83 (255)
Q Consensus 4 ~~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~ 83 (255)
...+||+|||+.. .+..++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++..
T Consensus 11 ~~~~iP~IDl~~~-------------~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~ 77 (332)
T PLN03002 11 KVSSLNCIDLAND-------------DLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLR 77 (332)
T ss_pred CCCCCCEEeCCch-------------hHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhcc
Confidence 4568999999942 245689999999999999999999999999999999999999999999999964
Q ss_pred CCCCCCccceeccccccc----CCCCcchhhhchhccccCcccccCCCCcCCCCCCCC--CcchHHHHHHHHHHHHHHHH
Q 025269 84 TPATGYRGYQRIGENITK----GIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLN--PPNFRALMEEYVNLCTDLSR 157 (255)
Q Consensus 84 ~~~~~~~GY~~~~~~~~~----g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~--~~~fr~~~~~y~~~~~~l~~ 157 (255)
. ..++||.+.+.+... ...|++|.|.++.+.+.... .....++++|.||+. +++||+.+++|++.|.+|+.
T Consensus 78 ~--~~~~GY~~~~~e~~~~~~~~~~d~kE~f~~~~~~p~~~~-~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~ 154 (332)
T PLN03002 78 N--EKHRGYTPVLDEKLDPKNQINGDHKEGYYIGIEVPKDDP-HWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSM 154 (332)
T ss_pred C--CCCCCcCcccccccccccCCCCcceeeeEecccCCCCCc-cccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHH
Confidence 4 348999987654322 13699999988754322111 112234678999974 68999999999999999999
Q ss_pred HHHHHHHHHcCCCcccccccc-cCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC-
Q 025269 158 KIMRGIALALGGSPFEFEGVR-AGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH- 235 (255)
Q Consensus 158 ~ll~~i~~~Lgl~~~~l~~~~-~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~- 235 (255)
.||++|+++|||++++|.+.+ .+.+.+.||++|||+++. .....+|+++|||+|+||||+|| +++||||+.+
T Consensus 155 ~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~-----~~~~~~g~~~HTD~g~lTlL~qd-~v~GLQV~~~~ 228 (332)
T PLN03002 155 AIAKLLALALDLDVGYFDRTEMLGKPIATMRLLRYQGISD-----PSKGIYACGAHSDFGMMTLLATD-GVMGLQICKDK 228 (332)
T ss_pred HHHHHHHHHcCCChHHhccccccCCCchheeeeeCCCCCC-----cccCccccccccCCCeEEEEeeC-CCCceEEecCC
Confidence 999999999999999998632 245568999999999974 23357899999999999999998 6999999863
Q ss_pred -----CeeecCCCCCceeecCC
Q 025269 236 -----LLLLVPGLGGSMDFHDS 252 (255)
Q Consensus 236 -----~w~~V~~~~g~l~Vn~~ 252 (255)
+|++|||+||+||||.|
T Consensus 229 ~~~~g~Wi~Vpp~pg~~VVNiG 250 (332)
T PLN03002 229 NAMPQKWEYVPPIKGAFIVNLG 250 (332)
T ss_pred CCCCCcEEECCCCCCeEEEEHH
Confidence 59999999999999986
No 5
>PLN02216 protein SRG1
Probab=100.00 E-value=3.9e-54 Score=375.77 Aligned_cols=222 Identities=27% Similarity=0.378 Sum_probs=186.2
Q ss_pred CCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccCC
Q 025269 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTP 85 (255)
Q Consensus 6 ~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~ 85 (255)
.+||+|||+.+.++ + .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++....
T Consensus 51 ~~iPvIDls~~~~~--~-------~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~ 121 (357)
T PLN02216 51 SEIPIIDMKRLCSS--T-------AMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRP 121 (357)
T ss_pred CCCCeEEChhccCC--c-------cHHHHHHHHHHHHHHCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCC
Confidence 47999999998642 1 23568999999999999999999999999999999999999999999999997543
Q ss_pred CCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 86 ATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIAL 165 (255)
Q Consensus 86 ~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~~ 165 (255)
..++||.........+..|++|.+.+..... ....+|.||+.++.||+.+++|++.|.+++.+||++|++
T Consensus 122 -~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~---------~~~~~~~WP~~p~~fr~~~~~y~~~~~~l~~~ll~~la~ 191 (357)
T PLN02216 122 -GEIEGFGQAFVVSEDQKLDWADMFFLTMQPV---------RLRKPHLFPKLPLPFRDTLETYSAEVKSIAKILFAKMAS 191 (357)
T ss_pred -CCccccCccccccccccCCceeeeeeeccCc---------ccccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478886543222234568999987643210 124679999988899999999999999999999999999
Q ss_pred HcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC-CeeecCCCC
Q 025269 166 ALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH-LLLLVPGLG 244 (255)
Q Consensus 166 ~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~-~w~~V~~~~ 244 (255)
+|||++++|.+.+.....+.||++|||||+ .++..+|+++|||+|+||||+|+++++||||+.. +|++|||+|
T Consensus 192 ~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p------~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~~~g~Wi~V~p~p 265 (357)
T PLN02216 192 ALEIKPEEMEKLFDDDLGQSIRMNYYPPCP------QPDQVIGLTPHSDAVGLTILLQVNEVEGLQIKKDGKWVSVKPLP 265 (357)
T ss_pred HcCCCHHHHHHHhccCchheeEEeecCCCC------CcccccCccCcccCceEEEEEecCCCCceeEEECCEEEECCCCC
Confidence 999999999887754345789999999997 3456899999999999999999536999999754 699999999
Q ss_pred CceeecCC
Q 025269 245 GSMDFHDS 252 (255)
Q Consensus 245 g~l~Vn~~ 252 (255)
|+||||.|
T Consensus 266 galvVNiG 273 (357)
T PLN02216 266 NALVVNVG 273 (357)
T ss_pred CeEEEEcc
Confidence 99999987
No 6
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=6.1e-54 Score=375.06 Aligned_cols=225 Identities=27% Similarity=0.407 Sum_probs=189.2
Q ss_pred CCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccC
Q 025269 5 FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLT 84 (255)
Q Consensus 5 ~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~ 84 (255)
..+||+|||+.+.++ + ..++++++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++...
T Consensus 50 ~~~IPvIDl~~l~~~--~-----~~~~~~~~~~l~~Ac~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~k~~~~ 122 (361)
T PLN02758 50 PDDIPVIDFSRLVKG--D-----NDELFSEILKLRLACEEWGFFQVINHGIELELLEEIEKVAREFFMLPLEEKQKYPMA 122 (361)
T ss_pred CCCCCeEEchhhcCC--C-----hHHHHHHHHHHHHHHHhCeEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHHHhccc
Confidence 457999999998643 2 234667899999999999999999999999999999999999999999999999764
Q ss_pred CCCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 85 PATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIA 164 (255)
Q Consensus 85 ~~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~ 164 (255)
. ..++||.........+..|++|.|.++.... ....+|.||+.+++||+.+++|+++|++++..||++|+
T Consensus 123 ~-~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~---------~~~~~~~WP~~~~~fr~~~~~y~~~~~~l~~~ll~~la 192 (361)
T PLN02758 123 P-GTVQGYGQAFVFSEDQKLDWCNMFALGVEPH---------FIRNPKLWPTKPARFSETLEVYSREIRELCQRLLKYIA 192 (361)
T ss_pred C-CCccccCcccccccccccCeeEEEEeeccCc---------cccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 3578997643222345568899887753211 01357999998889999999999999999999999999
Q ss_pred HHcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCC-CCCceeEEcC-CeeecCC
Q 025269 165 LALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDD-DITALEVQFH-LLLLVPG 242 (255)
Q Consensus 165 ~~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~-~~~GLQv~~~-~w~~V~~ 242 (255)
++||+++++|.+.+. .+.+.||+||||+|+ .++..+|+++|||+|+||||+|++ +++||||+.. +|++|||
T Consensus 193 ~~Lgl~~~~f~~~~~-~~~~~lR~~~YP~~~------~~~~~~g~~~HtD~g~lTlL~qd~~~v~GLQV~~~g~Wi~V~p 265 (361)
T PLN02758 193 MTLGLKEDRFEEMFG-EAVQAVRMNYYPPCS------RPDLVLGLSPHSDGSALTVLQQGKGSCVGLQILKDNTWVPVHP 265 (361)
T ss_pred HHcCCChhhhHHHhc-CccceeeeecCCCCC------CcccccCccCccCCceeEEEEeCCCCCCCeeeeeCCEEEeCCC
Confidence 999999999988764 566899999999997 345789999999999999999973 4889999765 6999999
Q ss_pred CCCceeecCCC
Q 025269 243 LGGSMDFHDSF 253 (255)
Q Consensus 243 ~~g~l~Vn~~~ 253 (255)
+||++|||.|-
T Consensus 266 ~pgalVVNiGD 276 (361)
T PLN02758 266 VPNALVINIGD 276 (361)
T ss_pred CCCeEEEEccc
Confidence 99999999873
No 7
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=5e-54 Score=375.87 Aligned_cols=229 Identities=23% Similarity=0.315 Sum_probs=192.3
Q ss_pred CCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccCC
Q 025269 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTP 85 (255)
Q Consensus 6 ~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~ 85 (255)
.+||+|||+.+.++ + +++|.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++....
T Consensus 39 ~~iPvIDls~~~~~--~-----~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~ 111 (361)
T PLN02276 39 LAVPLIDLGGFLSG--D-----EAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKP 111 (361)
T ss_pred CCCCeEEChhhcCC--C-----hHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCC
Confidence 57999999998653 2 2457889999999999999999999999999999999999999999999999987543
Q ss_pred CCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 86 ATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIAL 165 (255)
Q Consensus 86 ~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~~ 165 (255)
..++||.+.+.+...+..|++|.|.++......... ......+|.||+..++||+.+++|+..|.+++..||++|++
T Consensus 112 -~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~fr~~~~~y~~~~~~l~~~ll~~la~ 188 (361)
T PLN02276 112 -GESCGYASSHTGRFSSKLPWKETLSFGYHADGGSSP--VVVDYFKSVLGEDFEQFGKVYQEYCEAMKTLSLKIMELLGI 188 (361)
T ss_pred -CCccccCccCccccCCCCCeeeeEEEeccCcccccc--cchhcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457899987655445567899999986532211100 00112458899877899999999999999999999999999
Q ss_pred HcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC-CeeecCCCC
Q 025269 166 ALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH-LLLLVPGLG 244 (255)
Q Consensus 166 ~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~-~w~~V~~~~ 244 (255)
+|||++++|.+.+ ..+.+.||++|||+++ .++..+|+++|||+|+||||+|| .++||||+.. +|++|||+|
T Consensus 189 ~Lgl~~~~f~~~~-~~~~~~lrl~~YP~~~------~~~~~~g~~~HTD~g~lTlL~Qd-~v~GLQV~~~g~Wi~V~p~p 260 (361)
T PLN02276 189 SLGVDRGYYRKFF-EDGDSIMRCNYYPPCQ------EPELTLGTGPHCDPTSLTILHQD-QVGGLQVFVDNKWRSVRPRP 260 (361)
T ss_pred HcCCCHHHHHHHh-cCccceeeeEeCCCCC------CcccccCCccccCCceeEEEEec-CCCceEEEECCEEEEcCCCC
Confidence 9999999998876 4556899999999997 34568999999999999999998 6999999864 699999999
Q ss_pred CceeecCC
Q 025269 245 GSMDFHDS 252 (255)
Q Consensus 245 g~l~Vn~~ 252 (255)
|++|||.|
T Consensus 261 galVVNiG 268 (361)
T PLN02276 261 GALVVNIG 268 (361)
T ss_pred CeEEEEcH
Confidence 99999986
No 8
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.2e-53 Score=371.93 Aligned_cols=227 Identities=30% Similarity=0.459 Sum_probs=186.8
Q ss_pred CCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccC
Q 025269 5 FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLT 84 (255)
Q Consensus 5 ~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~ 84 (255)
..+||+|||+.+.+ .++++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++...
T Consensus 24 ~~~iPvIDls~~~~----------~~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~FF~LP~eeK~~~~~~ 93 (345)
T PLN02750 24 DEEIPVIDLSVSTS----------HDKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKEFFDQTTEEKRKVKRD 93 (345)
T ss_pred CCCCCeEECCCCCc----------ccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccC
Confidence 35899999998521 24678999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCccceecccccccCCCCcchhhhchhccccCcc---cccCCC-CcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 025269 85 PATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMY---GALGKT-MEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIM 160 (255)
Q Consensus 85 ~~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~---~~~~~~-~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll 160 (255)
.. ..+||.+. ....+..|++|.|+++.......+ ...... ...+|.||+.+++||+++++|++.|.+|+..||
T Consensus 94 ~~-~~~GY~~~--~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll 170 (345)
T PLN02750 94 EV-NPMGYHDS--EHTKNIRDWKEVFDFLVQDPTLVPASPDPEDTELRKLTNQWPQNPSHFRELCQEYARQVEKLAFKLL 170 (345)
T ss_pred CC-CccCcCcc--cccccCCCceeEEEEeecccccccccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 35799742 222345699999988753211100 000111 123799999888999999999999999999999
Q ss_pred HHHHHHcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEc---CCe
Q 025269 161 RGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQF---HLL 237 (255)
Q Consensus 161 ~~i~~~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~---~~w 237 (255)
++|+++||+++++|.+.+. ++.+.||++||||++. ++..+|+++|||+|+||||+|| .++||||+. ++|
T Consensus 171 ~~la~~Lgl~~~~f~~~~~-~~~~~lR~~~YPp~~~------~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~~~g~W 242 (345)
T PLN02750 171 ELISLSLGLPADRLNGYFK-DQISFARFNHYPPCPA------PHLALGVGRHKDGGALTVLAQD-DVGGLQISRRSDGEW 242 (345)
T ss_pred HHHHHHcCCCHHHHHHHhc-CcceEEEEEecCCCCC------cccccCcCCCCCCCeEEEEecC-CCCceEEeecCCCeE
Confidence 9999999999999988774 5668999999999973 3467899999999999999998 699999963 469
Q ss_pred eecCCCCCceeecCC
Q 025269 238 LLVPGLGGSMDFHDS 252 (255)
Q Consensus 238 ~~V~~~~g~l~Vn~~ 252 (255)
++|||+||+||||.|
T Consensus 243 i~V~p~pg~~vVNiG 257 (345)
T PLN02750 243 IPVKPIPDAFIINIG 257 (345)
T ss_pred EEccCCCCeEEEEhH
Confidence 999999999999986
No 9
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4.8e-53 Score=367.74 Aligned_cols=224 Identities=24% Similarity=0.290 Sum_probs=182.7
Q ss_pred CCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccC
Q 025269 5 FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLT 84 (255)
Q Consensus 5 ~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~ 84 (255)
.++||+|||+.+.++ + ..++..+++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++...
T Consensus 42 ~~~IPvIDls~~~~~--~------~~~~~~~~~l~~A~~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~~~~~~ 113 (348)
T PLN00417 42 EMDIPAIDLSLLLSS--S------DDGREELSKLHSALSTWGVVQVMNHGITEAFLDKIYKLTKQFFALPTEEKQKCARE 113 (348)
T ss_pred CCCCCeEEChhhcCC--C------chHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhcC
Confidence 358999999998753 2 12334568999999999999999999999999999999999999999999999765
Q ss_pred CCCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 85 PATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIA 164 (255)
Q Consensus 85 ~~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~ 164 (255)
. ..++||.+.......+..|++|.+.+... +.. ...+|.||+.+++||+.+++|++.|.+++.+||++|+
T Consensus 114 ~-~~~~GY~~~~~~~~~~~~d~~e~~~~~~~-p~~--------~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la 183 (348)
T PLN00417 114 I-GSIQGYGNDMILSDDQVLDWIDRLYLTTY-PED--------QRQLKFWPQVPVGFRETLHEYTMKQRLVIEKFFKAMA 183 (348)
T ss_pred C-CCccccccccccccCCCcCccceeecccC-Ccc--------cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 34789965221111344577777655421 100 1246899998889999999999999999999999999
Q ss_pred HHcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEc-CCeeecCCC
Q 025269 165 LALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQF-HLLLLVPGL 243 (255)
Q Consensus 165 ~~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~-~~w~~V~~~ 243 (255)
++|||++++|.+.+.....+.||++||||++. ++..+|+++|||+|+||||+||+.++||||+. ++|++|||+
T Consensus 184 ~~LGl~~~~f~~~~~~~~~~~lRl~~YPp~~~------~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~ 257 (348)
T PLN00417 184 RSLELEENCFLEMYGENATMDTRFNMYPPCPR------PDKVIGVKPHADGSAFTLLLPDKDVEGLQFLKDGKWYKAPIV 257 (348)
T ss_pred HHcCCCHHHHHHHhccCccceeeeeecCCCCC------cccccCCcCccCCCceEEEEecCCCCceeEeECCeEEECCCC
Confidence 99999999998877544456799999999973 45679999999999999999963599999975 479999999
Q ss_pred CCceeecCC
Q 025269 244 GGSMDFHDS 252 (255)
Q Consensus 244 ~g~l~Vn~~ 252 (255)
||++|||.|
T Consensus 258 pg~lVVNiG 266 (348)
T PLN00417 258 PDTILINVG 266 (348)
T ss_pred CCcEEEEcC
Confidence 999999987
No 10
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=4.4e-53 Score=368.67 Aligned_cols=220 Identities=23% Similarity=0.407 Sum_probs=184.1
Q ss_pred CCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccCCC
Q 025269 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPA 86 (255)
Q Consensus 7 ~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~ 86 (255)
.||+|||+.+.++ +..|.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.....
T Consensus 37 ~iPvIDls~~~~~--------~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~ 108 (358)
T PLN02515 37 EIPVISLAGIDEV--------GGRRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTRLARDFFALPAEEKLRFDMSGG 108 (358)
T ss_pred CCCEEEChhccCC--------chHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhCcCCC
Confidence 6999999998532 13577899999999999999999999999999999999999999999999999876543
Q ss_pred CCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 87 TGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALA 166 (255)
Q Consensus 87 ~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~~~ 166 (255)
..+||.........+..|++|.|.+...... ....|.||+.+++||+.+++|++.|.+|+..||++|+++
T Consensus 109 -~~~Gy~~~~~~~~~~~~d~kE~~~~~~~~~~---------~~~~n~WP~~~~~fr~~~~~y~~~~~~L~~~ll~~la~~ 178 (358)
T PLN02515 109 -KKGGFIVSSHLQGEAVQDWREIVTYFSYPVR---------TRDYSRWPDKPEGWRAVTEEYSEKLMGLACKLLEVLSEA 178 (358)
T ss_pred -CccCcccccccccccccCceeeeccccCccc---------ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3589964221111345789999876421100 123589999889999999999999999999999999999
Q ss_pred cCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC---CeeecCCC
Q 025269 167 LGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH---LLLLVPGL 243 (255)
Q Consensus 167 Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~---~w~~V~~~ 243 (255)
||+++++|.+.+. ...+.+|++|||+++ .++..+|+++|||+|+||||+|| .++||||+.+ +|++|||+
T Consensus 179 Lgl~~~~f~~~~~-~~~~~lrl~~YP~~~------~~~~~~G~~~HTD~g~lTlL~Qd-~v~GLQV~~~~~~~Wi~Vpp~ 250 (358)
T PLN02515 179 MGLEKEALTKACV-DMDQKVVVNYYPKCP------QPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPV 250 (358)
T ss_pred cCCChhhHHHhhc-CccceEEEeecCCCC------ChhhccCCCCCCCCCeEEEEecC-CCCceEEEECCCCeEEECCCC
Confidence 9999999987763 455789999999987 34578899999999999999998 6999999763 49999999
Q ss_pred CCceeecCC
Q 025269 244 GGSMDFHDS 252 (255)
Q Consensus 244 ~g~l~Vn~~ 252 (255)
||+||||.|
T Consensus 251 pgalVVNiG 259 (358)
T PLN02515 251 EGAFVVNLG 259 (358)
T ss_pred CCeEEEEcc
Confidence 999999987
No 11
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=4.5e-53 Score=369.98 Aligned_cols=225 Identities=24% Similarity=0.390 Sum_probs=187.8
Q ss_pred CCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccC
Q 025269 5 FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLT 84 (255)
Q Consensus 5 ~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~ 84 (255)
...||+|||+.+.++ + .+.|..++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++...
T Consensus 45 ~~~iPvIDls~~~~~--~-----~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~~ 117 (360)
T PLN03178 45 GPQVPVVDLSNIESD--D-----EVVREACVEAVRAAAAEWGVMHLVGHGIPADLLDRVRKAGEAFFRLPIEEKEKYAND 117 (360)
T ss_pred CCCCCEEEchhhcCC--C-----hhhHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhcc
Confidence 457999999998753 2 235788999999999999999999999999999999999999999999999999765
Q ss_pred C-CCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 025269 85 P-ATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGI 163 (255)
Q Consensus 85 ~-~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i 163 (255)
. ...++||.........+..|++|.+.+.. .+.. ...+|.||+.+++||+.+++|++.|++++..||++|
T Consensus 118 ~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~-~p~~--------~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~l 188 (360)
T PLN03178 118 QARGAAQGYGSKLAANASGQLEWEDYFFHLT-LPED--------KRDPSLWPKTPPDYVPATSEYSRSLRSLATKLLAIL 188 (360)
T ss_pred CCCCCccccccccccccccccchhHhhcccc-CCcc--------ccccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 23578996543322345567877765421 1110 124789999889999999999999999999999999
Q ss_pred HHHcCCCcccccccccC--CCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC-Ceeec
Q 025269 164 ALALGGSPFEFEGVRAG--DAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH-LLLLV 240 (255)
Q Consensus 164 ~~~Lgl~~~~l~~~~~~--~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~-~w~~V 240 (255)
+++|||++++|.+.+.. +..+.+|++|||+++. ++..+|+++|||+|+||||+|| .++||||+.. +|++|
T Consensus 189 a~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YP~~~~------~~~~~g~~~HTD~g~lTlL~qd-~v~GLQV~~~g~Wi~V 261 (360)
T PLN03178 189 SLGLGLPEDRLEKEVGGLEELLLQMKINYYPRCPQ------PDLALGVEAHTDVSALTFILHN-MVPGLQVLYEGKWVTA 261 (360)
T ss_pred HHHcCCCHHHHHHHhcCcccchhhhheeccCCCCC------CccccCcCCccCCCceEEEeeC-CCCceeEeECCEEEEc
Confidence 99999999999887752 3457899999999973 4568999999999999999998 6999999764 69999
Q ss_pred CCCCCceeecCC
Q 025269 241 PGLGGSMDFHDS 252 (255)
Q Consensus 241 ~~~~g~l~Vn~~ 252 (255)
||+||+||||.|
T Consensus 262 ~p~pg~lvVNiG 273 (360)
T PLN03178 262 KCVPDSIVVHIG 273 (360)
T ss_pred CCCCCeEEEEcc
Confidence 999999999987
No 12
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=5.4e-53 Score=368.09 Aligned_cols=213 Identities=28% Similarity=0.426 Sum_probs=180.8
Q ss_pred CCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccCC
Q 025269 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTP 85 (255)
Q Consensus 6 ~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~ 85 (255)
.+||||||+.. .++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++....
T Consensus 55 ~~iPvIDl~~~----------------~~~~~l~~Ac~~~GFF~vvnHGI~~~l~~~~~~~~~~FF~LP~EeK~k~~~~~ 118 (358)
T PLN02254 55 ESIPVIDLSDP----------------NALTLIGHACETWGVFQVTNHGIPLSLLDDIESQTRRLFSLPAQRKLKAARSP 118 (358)
T ss_pred CCCCeEeCCCH----------------HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCC
Confidence 47999999742 36899999999999999999999999999999999999999999999987543
Q ss_pred CCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 86 ATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIAL 165 (255)
Q Consensus 86 ~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~~ 165 (255)
..++||...+.....++.|++|.|.+..... ...+|.||+.+++||+++++|++.|++|+.+||++|++
T Consensus 119 -~~~~Gy~~~~~~~~~~~~~w~e~~~~~~~p~----------~~~~~~wP~~~~~fr~~~~~Y~~~~~~L~~~ll~~la~ 187 (358)
T PLN02254 119 -DGVSGYGVARISSFFNKKMWSEGFTIMGSPL----------EHARQLWPQDHTKFCDVMEEYQKEMKKLAERLMWLMLG 187 (358)
T ss_pred -CCcccccccccccccCCCCceeeEEeecCcc----------ccchhhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577997654333345568899987742110 12468999988999999999999999999999999999
Q ss_pred HcCCCccccccccc----CCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC--Ceee
Q 025269 166 ALGGSPFEFEGVRA----GDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH--LLLL 239 (255)
Q Consensus 166 ~Lgl~~~~l~~~~~----~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~--~w~~ 239 (255)
+|||++++|...+. .++.+.||+||||||+ .++..+|+++|||+|+||||+|| .++||||+.+ +|++
T Consensus 188 ~Lgl~~~~~~~~~~~~~~~~~~~~lRl~~YPp~p------~~~~~~G~~~HtD~g~lTiL~Qd-~v~GLQV~~~~~~Wi~ 260 (358)
T PLN02254 188 SLGITEEDIKWAGPKSGSQGAQAALQLNSYPVCP------DPDRAMGLAPHTDSSLLTILYQS-NTSGLQVFREGVGWVT 260 (358)
T ss_pred HcCCCHHHHHHHhhcccccCcceeEEEecCCCCC------CcccccCcCCccCCCcEEEEecC-CCCCceEECCCCEEEE
Confidence 99999988865541 3456799999999998 34568999999999999999998 6999999875 5999
Q ss_pred cCCCCCceeecCC
Q 025269 240 VPGLGGSMDFHDS 252 (255)
Q Consensus 240 V~~~~g~l~Vn~~ 252 (255)
|+|+||+||||.|
T Consensus 261 V~p~pgalVVNiG 273 (358)
T PLN02254 261 VPPVPGSLVVNVG 273 (358)
T ss_pred cccCCCCEEEEhH
Confidence 9999999999986
No 13
>PLN02997 flavonol synthase
Probab=100.00 E-value=1.8e-52 Score=360.77 Aligned_cols=213 Identities=28% Similarity=0.447 Sum_probs=179.9
Q ss_pred CCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccCC
Q 025269 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTP 85 (255)
Q Consensus 6 ~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~ 85 (255)
.+||+|||+.+ ++++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++...
T Consensus 31 ~~IPvIDls~~-------------~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~- 96 (325)
T PLN02997 31 VDVPVVDLSVS-------------DEDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKE- 96 (325)
T ss_pred CCCCeEECCCC-------------CHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC-
Confidence 46999999964 1357899999999999999999999999999999999999999999999998754
Q ss_pred CCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 86 ATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIAL 165 (255)
Q Consensus 86 ~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~~ 165 (255)
..++||.+... .+..|++|.+.... .+. .....|.||+.+++||+++++|++.|.+++.+||++|++
T Consensus 97 -~~~~GY~~~~~---~~~~d~~e~~~~~~-~p~--------~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ia~ 163 (325)
T PLN02997 97 -EDFEGYKRNYL---GGINNWDEHLFHRL-SPP--------SIINYKYWPKNPPQYREVTEEYTKHMKRLTEKILGWLSE 163 (325)
T ss_pred -CCccccCcccc---cCCCCccceeEeee-cCc--------cccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34789986542 35567888754321 010 012458999988999999999999999999999999999
Q ss_pred HcCCCcccccccccCC-CccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC-CeeecCCC
Q 025269 166 ALGGSPFEFEGVRAGD-AFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH-LLLLVPGL 243 (255)
Q Consensus 166 ~Lgl~~~~l~~~~~~~-~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~-~w~~V~~~ 243 (255)
+||+++++|.+.+... ..+.||++||||++. ++..+|+++|||+|+||||+|| .++||||+.. +|++|||+
T Consensus 164 ~Lgl~~~~f~~~~~~~~~~~~lRl~~YP~~~~------~~~~~g~~~HTD~g~lTlL~Qd-~v~GLQV~~~g~Wi~V~p~ 236 (325)
T PLN02997 164 GLGLPRETFTQSIGGETAEYVLRVNFYPPTQD------TELVIGAAAHSDMGAIALLIPN-EVPGLQAFKDEQWLDLNYI 236 (325)
T ss_pred HcCCCHHHHHHHhcCCcccceeeeecCCCCCC------cccccCccCccCCCceEEEecC-CCCCEEEeECCcEEECCCC
Confidence 9999999998877532 345899999999973 4567999999999999999998 6999999764 69999999
Q ss_pred CCceeecCC
Q 025269 244 GGSMDFHDS 252 (255)
Q Consensus 244 ~g~l~Vn~~ 252 (255)
||+||||.|
T Consensus 237 pgalvVNiG 245 (325)
T PLN02997 237 NSAVVVIIG 245 (325)
T ss_pred CCeEEEEec
Confidence 999999987
No 14
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=1.8e-52 Score=360.42 Aligned_cols=218 Identities=21% Similarity=0.337 Sum_probs=182.8
Q ss_pred CCCCCCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhc
Q 025269 1 MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIK 80 (255)
Q Consensus 1 m~~~~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~ 80 (255)
|+. +.+||+|||+.+.. .++.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|++
T Consensus 1 ~~~-~~~iPvIDls~~~~----------~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~ 69 (321)
T PLN02299 1 MAK-MESFPVIDMEKLNG----------EERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFK 69 (321)
T ss_pred CCC-CCCCCEEECcCCCc----------ccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHh
Confidence 666 56899999998742 2456789999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 025269 81 IKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIM 160 (255)
Q Consensus 81 ~~~~~~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll 160 (255)
+... .+||.+.+.+. +..|++|.|.+.. .+ ....|.||+.+++||+.+++|++.|.+++.+||
T Consensus 70 ~~~~----~~gy~~~~~~~--~~~d~ke~~~~~~-~~----------~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll 132 (321)
T PLN02299 70 EMVA----SKGLEGVQTEV--EDLDWESTFFLRH-LP----------ESNLADIPDLDDEYRKVMKDFALELEKLAEELL 132 (321)
T ss_pred cccC----CCCcccccccC--CCcCHHHHccccc-CC----------ccccccCccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 7532 36887654332 3468999987742 11 123578999889999999999999999999999
Q ss_pred HHHHHHcCCCcccccccccC--CCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC-Ce
Q 025269 161 RGIALALGGSPFEFEGVRAG--DAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH-LL 237 (255)
Q Consensus 161 ~~i~~~Lgl~~~~l~~~~~~--~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~-~w 237 (255)
++|+++||+++++|.+.+.. .+.+.||++||||++. ++..+|+++|||+|+||||+||+.++||||+.. +|
T Consensus 133 ~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YPp~~~------~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~g~W 206 (321)
T PLN02299 133 DLLCENLGLEKGYLKKAFHGSKGPTFGTKVSNYPPCPK------PDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEW 206 (321)
T ss_pred HHHHHHcCCCHHHHHHHhcCCCCccceeeeEecCCCCC------cccccCccCccCCCeEEEEEecCCCCCcCcccCCeE
Confidence 99999999999999876632 3456799999999973 345789999999999999999635999999754 69
Q ss_pred eecCCCCCceeecCC
Q 025269 238 LLVPGLGGSMDFHDS 252 (255)
Q Consensus 238 ~~V~~~~g~l~Vn~~ 252 (255)
++|||+||++|||.|
T Consensus 207 i~V~p~pg~lvVNiG 221 (321)
T PLN02299 207 VDVPPMRHSIVVNLG 221 (321)
T ss_pred EECCCCCCeEEEEeC
Confidence 999999999999986
No 15
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.8e-52 Score=364.20 Aligned_cols=219 Identities=23% Similarity=0.357 Sum_probs=180.6
Q ss_pred CCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccC
Q 025269 5 FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLT 84 (255)
Q Consensus 5 ~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~ 84 (255)
..+||+|||+.+.+. .+.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++...
T Consensus 39 ~~~iPvIDls~~~~~----------~~~~~~~~l~~A~~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~ 108 (348)
T PLN02912 39 GDSIPLIDLRDLHGP----------NRADIINQFAHACSSYGFFQIKNHGVPEETIKKMMNVAREFFHQSESERVKHYSA 108 (348)
T ss_pred CCCCCeEECcccCCc----------CHHHHHHHHHHHHHHCCEEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHhHhhc
Confidence 457999999988531 3577899999999999999999999999999999999999999999999995433
Q ss_pred C-CCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 025269 85 P-ATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGI 163 (255)
Q Consensus 85 ~-~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i 163 (255)
. .+..+||...... ..+..|++|.+.+... +. ...+|.||+.+++||+++++|++.|.+++.+||++|
T Consensus 109 ~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~-~~---------~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~il~~l 177 (348)
T PLN02912 109 DTKKTTRLSTSFNVS-KEKVSNWRDFLRLHCY-PI---------EDFIEEWPSTPISFREVTAEYATSVRALVLTLLEAI 177 (348)
T ss_pred CCCCccccccccccc-ccccCCchheEEEeec-Cc---------ccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2334555543211 1334577887765321 00 013689999888999999999999999999999999
Q ss_pred HHHcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEc-CCeeecCC
Q 025269 164 ALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQF-HLLLLVPG 242 (255)
Q Consensus 164 ~~~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~-~~w~~V~~ 242 (255)
+++||+++++|.+.+ ....+.||++||||++. ++..+|+++|||+|+||||+|| +++||||+. ++|++|||
T Consensus 178 a~~Lgl~~~~f~~~~-~~~~~~lrl~~YPp~~~------~~~~~G~~~HtD~g~lTlL~Qd-~v~GLQV~~~g~Wi~V~p 249 (348)
T PLN02912 178 SESLGLEKDRVSNTL-GKHGQHMAINYYPPCPQ------PELTYGLPGHKDANLITVLLQD-EVSGLQVFKDGKWIAVNP 249 (348)
T ss_pred HHHcCCCHHHHHHHh-cCccceeeeeecCCCCC------hhhcCCcCCCcCCCceEEEEEC-CCCceEEEECCcEEECCC
Confidence 999999999998766 34568899999999973 3468999999999999999998 699999975 47999999
Q ss_pred CCCceeecCC
Q 025269 243 LGGSMDFHDS 252 (255)
Q Consensus 243 ~~g~l~Vn~~ 252 (255)
+||+||||.|
T Consensus 250 ~pgalvVNiG 259 (348)
T PLN02912 250 IPNTFIVNLG 259 (348)
T ss_pred cCCeEEEEcC
Confidence 9999999987
No 16
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=6.7e-52 Score=362.57 Aligned_cols=225 Identities=27% Similarity=0.458 Sum_probs=187.5
Q ss_pred CCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccC
Q 025269 5 FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLT 84 (255)
Q Consensus 5 ~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~ 84 (255)
.++||+|||+.+.++ + .+.|.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++...
T Consensus 49 ~~~iPvIDls~l~~~--~-----~~~r~~~~~~l~~Ac~~~GFF~l~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~ 121 (362)
T PLN02393 49 EINIPVIDLSSLFSD--D-----ARLRDATLRAISEACREWGFFQVVNHGVRPELMDRAREAWREFFHLPLEVKQRYANS 121 (362)
T ss_pred CCCCCeEECccccCC--C-----hHHHHHHHHHHHHHHHHCcEEEEEeCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcc
Confidence 358999999998753 2 246788999999999999999999999999999999999999999999999999754
Q ss_pred CCCCCccce-ecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 025269 85 PATGYRGYQ-RIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGI 163 (255)
Q Consensus 85 ~~~~~~GY~-~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i 163 (255)
. ..++||. ..+.+. .+..|++|.+.+... + .....+|.||+.+++||+.+++|++.|.+++..||++|
T Consensus 122 ~-~~~~Gy~~~~~~~~-~~~~d~~e~~~~~~~--~-------~~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l 190 (362)
T PLN02393 122 P-ATYEGYGSRLGVEK-GAILDWSDYYFLHYL--P-------SSLKDPNKWPSLPPSCRELIEEYGEEVVKLCGRLMKVL 190 (362)
T ss_pred c-Cccccccccccccc-ccccCchhheeeeec--C-------ccccchhhCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 3578994 333321 245688888766421 0 01245789999889999999999999999999999999
Q ss_pred HHHcCCCcccccccccCC--CccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC-Ceeec
Q 025269 164 ALALGGSPFEFEGVRAGD--AFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH-LLLLV 240 (255)
Q Consensus 164 ~~~Lgl~~~~l~~~~~~~--~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~-~w~~V 240 (255)
+++||+++++|.+.+... +.+.+|++|||+++. ++..+|+++|||+|+||||+|++.++||||+.. +|++|
T Consensus 191 a~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YP~~p~------~~~~~g~~~HtD~g~lTlL~q~~~v~GLQV~~~g~W~~V 264 (362)
T PLN02393 191 SVNLGLEEDRLQNAFGGEDGVGACLRVNYYPKCPQ------PDLTLGLSPHSDPGGMTILLPDDNVAGLQVRRDDAWITV 264 (362)
T ss_pred HHHcCCCHHHHHHHhCCCccccceeeeeecCCCCC------cccccccccccCCceEEEEeeCCCCCcceeeECCEEEEC
Confidence 999999999998776432 236899999999973 456789999999999999998546999999754 69999
Q ss_pred CCCCCceeecCCC
Q 025269 241 PGLGGSMDFHDSF 253 (255)
Q Consensus 241 ~~~~g~l~Vn~~~ 253 (255)
+|+||+||||.|-
T Consensus 265 ~p~pgalVVNiGD 277 (362)
T PLN02393 265 KPVPDAFIVNIGD 277 (362)
T ss_pred CCCCCeEEEEcch
Confidence 9999999999874
No 17
>PLN02947 oxidoreductase
Probab=100.00 E-value=1.4e-51 Score=360.87 Aligned_cols=221 Identities=25% Similarity=0.407 Sum_probs=178.4
Q ss_pred CCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccC
Q 025269 5 FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLT 84 (255)
Q Consensus 5 ~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~ 84 (255)
..+||+|||+.+.+ ..+..++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++...
T Consensus 64 ~~~iPvIDls~l~~----------~~~~~~~~~l~~Ac~~~GFF~v~nHGIp~~li~~~~~~~~~FF~LP~eeK~k~~~~ 133 (374)
T PLN02947 64 NLKLPVIDLAELRG----------SNRPHVLATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSA 133 (374)
T ss_pred CCCCCeEECcccCC----------ccHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhcc
Confidence 35799999998853 13578899999999999999999999999999999999999999999999998644
Q ss_pred CCCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 85 PATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIA 164 (255)
Q Consensus 85 ~~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~ 164 (255)
......||........++..+++|.+.+.... . ...+|.||+.+++||+.+++|++.|++|+.+||++|+
T Consensus 134 ~~~~~~gyg~~~~~~~~~~~~~~e~~~~~~~p-------~---~~~~~~WP~~~~~fr~~~~~Y~~~~~~L~~~ll~~la 203 (374)
T PLN02947 134 DMRAPVRYGTSFNQNKDAVFCWRDFLKLVCHP-------L---SDVLPHWPSSPADLRKVAATYAKATKRLFLELMEAIL 203 (374)
T ss_pred cCCCCeeeccccccccccccCceeceeeecCC-------c---ccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32334566432111123345666666543210 0 0125899998899999999999999999999999999
Q ss_pred HHcCCCc---ccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC-Ceeec
Q 025269 165 LALGGSP---FEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH-LLLLV 240 (255)
Q Consensus 165 ~~Lgl~~---~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~-~w~~V 240 (255)
++||+++ ++|.+.+ ....+.+|+||||||+ .++..+|+++|||+|+||||+|| .++||||+.. +|++|
T Consensus 204 ~~Lgl~~~~~~~~~~~~-~~~~~~lrln~YPp~p------~~~~~~G~~~HTD~g~lTlL~Qd-~v~GLQV~~~g~Wi~V 275 (374)
T PLN02947 204 ESLGIVKRGSDELLEEF-EAGSQMMVVNCYPACP------EPELTLGMPPHSDYGFLTLLLQD-EVEGLQIMHAGRWVTV 275 (374)
T ss_pred HHcCCCccchHHHHHHh-cCcceeeeeecCCCCC------CcccccCCCCccCCCceEEEEec-CCCCeeEeECCEEEeC
Confidence 9999973 4555444 3456799999999997 45678999999999999999998 6999999864 69999
Q ss_pred CCCCCceeecCCC
Q 025269 241 PGLGGSMDFHDSF 253 (255)
Q Consensus 241 ~~~~g~l~Vn~~~ 253 (255)
||+||+||||.|=
T Consensus 276 ~p~pga~VVNvGD 288 (374)
T PLN02947 276 EPIPGSFVVNVGD 288 (374)
T ss_pred CCCCCeEEEEeCc
Confidence 9999999999874
No 18
>PLN02904 oxidoreductase
Probab=100.00 E-value=2.8e-51 Score=357.52 Aligned_cols=219 Identities=27% Similarity=0.434 Sum_probs=175.2
Q ss_pred CCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccCC
Q 025269 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTP 85 (255)
Q Consensus 6 ~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~ 85 (255)
..||+|||+.+.+. +.|..++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++....
T Consensus 50 ~~iPvIDls~~~~~---------~~r~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~ 120 (357)
T PLN02904 50 ITLPVIDLSLLHDP---------LLRSCVIHEIEMACKGFGFFQVINHGIPSSVVKDALDAATRFFDLPVDEKMLLVSDN 120 (357)
T ss_pred CCCCEEECcccCCc---------hhHHHHHHHHHHHHHHCceEEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHhhhcccC
Confidence 47999999987531 356788999999999999999999999999999999999999999999999986543
Q ss_pred CCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 86 ATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIAL 165 (255)
Q Consensus 86 ~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~~ 165 (255)
...+.||........++..+++|.+.... . +. ...+|.||+.+++||+.+++|++.|.+++..||++|++
T Consensus 121 ~~~~~~~g~~~~~~~~~~~~~~d~~~~~~-----~--p~---~~~~n~WP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~ 190 (357)
T PLN02904 121 VHEPVRYGTSLNHSTDRVHYWRDFIKHYS-----H--PL---SKWINLWPSNPPCYKEKVGKYAEATHVLHKQLIEAISE 190 (357)
T ss_pred CCCcccccccccccCCCCCCceEEeeecc-----C--Cc---ccccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333443211111112223444332210 0 00 01368999888999999999999999999999999999
Q ss_pred HcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC--CeeecCCC
Q 025269 166 ALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH--LLLLVPGL 243 (255)
Q Consensus 166 ~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~--~w~~V~~~ 243 (255)
+||+++++|.+.+ ....+.||++|||||+. ++..+|+++|||+|+||||+|+ ++||||+.+ +|++|||+
T Consensus 191 ~Lgl~~~~f~~~~-~~~~~~lrl~~YPp~p~------~~~~~g~~~HtD~g~lTlL~qd--~~GLQV~~~~g~Wi~V~p~ 261 (357)
T PLN02904 191 SLGLEKNYLQEEI-EEGSQVMAVNCYPACPE------PEIALGMPPHSDFGSLTILLQS--SQGLQIMDCNKNWVCVPYI 261 (357)
T ss_pred HcCCCHHHHHHHh-cCcccEEEeeecCCCCC------cccccCCcCccCCCceEEEecC--CCeeeEEeCCCCEEECCCC
Confidence 9999999998776 45567899999999973 4568999999999999999996 589999874 79999999
Q ss_pred CCceeecCC
Q 025269 244 GGSMDFHDS 252 (255)
Q Consensus 244 ~g~l~Vn~~ 252 (255)
||+||||.|
T Consensus 262 pgalVVNiG 270 (357)
T PLN02904 262 EGALIVQLG 270 (357)
T ss_pred CCeEEEEcc
Confidence 999999987
No 19
>PLN02704 flavonol synthase
Probab=100.00 E-value=2.1e-51 Score=356.41 Aligned_cols=220 Identities=25% Similarity=0.423 Sum_probs=179.6
Q ss_pred CCCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhcccc
Q 025269 4 DFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKL 83 (255)
Q Consensus 4 ~~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~ 83 (255)
+..+||+|||+.. .+.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++..
T Consensus 39 ~~~~iPvIDls~~-------------~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~~~~~ 105 (335)
T PLN02704 39 VDPQVPTIDLSDP-------------DEEKLTRLIAEASKEWGMFQIVNHGIPSEVISKLQKVGKEFFELPQEEKEVYAK 105 (335)
T ss_pred cCCCCCeEECCCc-------------cHHHHHHHHHHHHHHcCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHHhhc
Confidence 3458999999963 135789999999999999999999999999999999999999999999999976
Q ss_pred CC-CCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 025269 84 TP-ATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRG 162 (255)
Q Consensus 84 ~~-~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ 162 (255)
.. ...++||.........+..+++|.+.... .+. .....|.||+.+++||+.+++|++.|.+++.+||++
T Consensus 106 ~~~~~~~~Gy~~~~~~~~~~~~~~~d~~~~~~-~p~--------~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~ 176 (335)
T PLN02704 106 PPDSKSIEGYGTKLQKEPEGKKAWVDHLFHRI-WPP--------SAINYQFWPKNPPSYREVNEEYAKYLRGVADKLFKT 176 (335)
T ss_pred cCCCcccccccccccccccCcccceeeeEeee-cCC--------cccchhhCccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 53 33578997644332334455555443211 000 012358999888999999999999999999999999
Q ss_pred HHHHcCCCcccccccccCC-CccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC-Ceeec
Q 025269 163 IALALGGSPFEFEGVRAGD-AFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH-LLLLV 240 (255)
Q Consensus 163 i~~~Lgl~~~~l~~~~~~~-~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~-~w~~V 240 (255)
|+++||+++++|.+.+..+ ..+.+|++||||++. ++..+|+++|||+|+||||+|| .++||||+.. +|++|
T Consensus 177 la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~------~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V 249 (335)
T PLN02704 177 LSLGLGLEEDELKEAVGGEELEYLLKINYYPPCPR------PDLALGVVAHTDMSAITILVPN-EVQGLQVFRDDHWFDV 249 (335)
T ss_pred HHHHcCCCHHHHHHHhcCCchhhhhhhhcCCCCCC------cccccCccCccCCcceEEEecC-CCCceeEeECCEEEeC
Confidence 9999999999998766433 345899999999873 4568999999999999999998 6999999754 69999
Q ss_pred CCCCCceeecCC
Q 025269 241 PGLGGSMDFHDS 252 (255)
Q Consensus 241 ~~~~g~l~Vn~~ 252 (255)
||+||+||||.|
T Consensus 250 ~p~pg~lvVNvG 261 (335)
T PLN02704 250 KYIPNALVIHIG 261 (335)
T ss_pred CCCCCeEEEEec
Confidence 999999999987
No 20
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.7e-51 Score=355.19 Aligned_cols=216 Identities=25% Similarity=0.398 Sum_probs=177.4
Q ss_pred CCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccCC
Q 025269 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTP 85 (255)
Q Consensus 6 ~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~ 85 (255)
.+||+|||+.. ++++++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++....
T Consensus 36 ~~iPvIDls~~-------------~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~ 102 (337)
T PLN02639 36 ENVPVIDLGSP-------------DRAQVVQQIGDACRRYGFFQVINHGVSAELVEKMLAVAHEFFRLPVEEKMKLYSDD 102 (337)
T ss_pred CCCCeEECCCc-------------cHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccC
Confidence 47999999853 35689999999999999999999999999999999999999999999999976443
Q ss_pred C-CCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 86 A-TGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIA 164 (255)
Q Consensus 86 ~-~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~ 164 (255)
. +.+++|...+.. ..+..+++|.+.+... +. ...+|.||+.+++||+.+++|++.|++++.+||++|+
T Consensus 103 ~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~--p~--------~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la 171 (337)
T PLN02639 103 PTKTMRLSTSFNVR-KEKVHNWRDYLRLHCY--PL--------DKYVPEWPSNPPSFKEIVSTYCREVRELGFRLQEAIS 171 (337)
T ss_pred CCCccccccccccc-cCcccCchheEEeeec--CC--------cccchhCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 233444433211 1234567777765221 00 0135889988889999999999999999999999999
Q ss_pred HHcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC-CeeecCCC
Q 025269 165 LALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH-LLLLVPGL 243 (255)
Q Consensus 165 ~~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~-~w~~V~~~ 243 (255)
++|||++++|.+.+. ...+.+|++|||+++. ++..+|+++|||+|+||||+||+.++||||+.. +|++|||+
T Consensus 172 ~~Lgl~~~~f~~~~~-~~~~~lrl~~YP~~~~------~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~ 244 (337)
T PLN02639 172 ESLGLEKDYIKNVLG-EQGQHMAVNYYPPCPE------PELTYGLPAHTDPNALTILLQDQQVAGLQVLKDGKWVAVNPH 244 (337)
T ss_pred HHcCCCHHHHHHHhC-CCccEEEEEcCCCCCC------cccccCCCCCcCCCceEEEEecCCcCceEeecCCeEEeccCC
Confidence 999999999987663 4567899999999973 456789999999999999999734999999764 69999999
Q ss_pred CCceeecCC
Q 025269 244 GGSMDFHDS 252 (255)
Q Consensus 244 ~g~l~Vn~~ 252 (255)
||++|||.|
T Consensus 245 pg~lVVNiG 253 (337)
T PLN02639 245 PGAFVINIG 253 (337)
T ss_pred CCeEEEech
Confidence 999999987
No 21
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=5.3e-50 Score=344.12 Aligned_cols=223 Identities=36% Similarity=0.557 Sum_probs=184.5
Q ss_pred CCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccCC
Q 025269 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTP 85 (255)
Q Consensus 6 ~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~ 85 (255)
.+||+|||+.+.+. + ..+..++++|.+||++||||+|+||||+.++++++++.+++||+||.|+|+++....
T Consensus 16 ~~iPvIDls~~~~~--~------~~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~~~ 87 (322)
T KOG0143|consen 16 LDIPVIDLSCLDSD--D------PGREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVASEP 87 (322)
T ss_pred CCcCeEECCCCCCc--c------hhHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhccCC
Confidence 48999999987542 1 147889999999999999999999999999999999999999999999999998665
Q ss_pred CCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 86 ATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIAL 165 (255)
Q Consensus 86 ~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~~ 165 (255)
. .+.||............++.+.+.+..... ....++.||+.++.||+.|++|.+++.+++..|+++|++
T Consensus 88 ~-~~~gY~~~~~~~~~~~~~w~d~~~~~~~p~---------~~~~~~~wp~~p~~~re~~~eY~~~~~~L~~~l~~~l~e 157 (322)
T KOG0143|consen 88 G-KYRGYGTSFILSPLKELDWRDYLTLLSAPE---------SSFDPNLWPEGPPEFRETMEEYAKEVMELSEKLLRLLSE 157 (322)
T ss_pred C-CcccccccccccccccccchhheeeeccCc---------cccCcccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 568887654322223445666554321100 013568999999999999999999999999999999999
Q ss_pred HcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEc--CCeeecCCC
Q 025269 166 ALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQF--HLLLLVPGL 243 (255)
Q Consensus 166 ~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~--~~w~~V~~~ 243 (255)
+||++..++.+.+.....+.||+||||||+ +++..+|+++|||.++||+|+||+.++||||.. +.|+.|+|+
T Consensus 158 slgl~~~~~~~~~~~~~~~~~r~n~Yp~cp------~pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg~Wi~V~P~ 231 (322)
T KOG0143|consen 158 SLGLEPEYLEKLFGETGGQVMRLNYYPPCP------EPELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDGKWIDVPPI 231 (322)
T ss_pred HcCCChHHHHHhhCCccceEEEEeecCCCc------CccccccccCccCcCceEEEEccCCcCceEEEecCCeEEECCCC
Confidence 999987666555533345699999999999 678999999999999999999975699999995 579999999
Q ss_pred CCceeecCC
Q 025269 244 GGSMDFHDS 252 (255)
Q Consensus 244 ~g~l~Vn~~ 252 (255)
||+||||.|
T Consensus 232 p~a~vVNiG 240 (322)
T KOG0143|consen 232 PGAFVVNIG 240 (322)
T ss_pred CCCEEEEcc
Confidence 999999986
No 22
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=1.7e-49 Score=343.03 Aligned_cols=214 Identities=25% Similarity=0.316 Sum_probs=172.7
Q ss_pred CCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccCCC
Q 025269 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPA 86 (255)
Q Consensus 7 ~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~ 86 (255)
.||+|||+.. +..++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++...
T Consensus 26 ~iPvIDls~~----------------~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~-- 87 (335)
T PLN02156 26 LIPVIDLTDS----------------DAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPP-- 87 (335)
T ss_pred CCCcccCCCh----------------HHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCC--
Confidence 5999999841 2357899999999999999999999999999999999999999999998643
Q ss_pred CCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 87 TGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALA 166 (255)
Q Consensus 87 ~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~~~ 166 (255)
..+||..... ...+..+++|.+.+..+.... ....+|.||+.+++||+.+++|++.|++++.+||++|+++
T Consensus 88 -~~~Gy~~~~~-~~~~~~~~~e~~~~~~~~~~~-------~~~~~~~wp~~p~~fr~~~~~Y~~~~~~L~~~ll~~la~~ 158 (335)
T PLN02156 88 -DPFGYGTKRI-GPNGDVGWLEYILLNANLCLE-------SHKTTAVFRHTPAIFREAVEEYMKEMKRMSSKVLEMVEEE 158 (335)
T ss_pred -CCcccCcccc-CCCCCCCceeeEeeecCCccc-------cccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2458853211 112335788888765321110 0113689998888999999999999999999999999999
Q ss_pred cCCCc-cccccccc-CCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEc--CCeeecCC
Q 025269 167 LGGSP-FEFEGVRA-GDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQF--HLLLLVPG 242 (255)
Q Consensus 167 Lgl~~-~~l~~~~~-~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~--~~w~~V~~ 242 (255)
||+++ ++|.+.+. ....+.||+||||+++.. .++..+|+++|||+|+||||+|| +++||||+. ++|++|||
T Consensus 159 LGl~~~~~f~~~~~~~~~~~~lRl~~YP~~~~~----~~~~~~g~~~HTD~g~lTlL~Qd-~v~GLQV~~~~g~Wi~Vpp 233 (335)
T PLN02156 159 LKIEPKEKLSKLVKVKESDSCLRMNHYPEKEET----PEKVEIGFGEHTDPQLISLLRSN-DTAGLQICVKDGTWVDVPP 233 (335)
T ss_pred cCcCcHHHHHHHhcCCCccceEeEEeCCCCCCC----ccccccCCCCccCCCceEEEEeC-CCCceEEEeCCCCEEEccC
Confidence 99964 67877654 234578999999999741 22357899999999999999998 699999974 47999999
Q ss_pred CCCceeecCC
Q 025269 243 LGGSMDFHDS 252 (255)
Q Consensus 243 ~~g~l~Vn~~ 252 (255)
+||+||||.|
T Consensus 234 ~pga~VVNiG 243 (335)
T PLN02156 234 DHSSFFVLVG 243 (335)
T ss_pred CCCcEEEEhH
Confidence 9999999986
No 23
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.4e-49 Score=344.28 Aligned_cols=213 Identities=24% Similarity=0.373 Sum_probs=169.7
Q ss_pred CCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhcccc-CC
Q 025269 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKL-TP 85 (255)
Q Consensus 7 ~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~-~~ 85 (255)
.||+|||+.+ .+++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.. ..
T Consensus 38 ~IPvIDls~~-----------------~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~ 100 (341)
T PLN02984 38 DIPVIDMECL-----------------DMEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNS 100 (341)
T ss_pred CCCeEeCcHH-----------------HHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCC
Confidence 5999999964 25789999999999999999999999999999999999999999999852 11
Q ss_pred -CCCCccceecc---cccc----cCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 025269 86 -ATGYRGYQRIG---ENIT----KGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSR 157 (255)
Q Consensus 86 -~~~~~GY~~~~---~~~~----~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~ 157 (255)
..+++||.... .+.. .+..|++|.|.++....... . ..++.|| .+++||+++++|+++|.+++.
T Consensus 101 ~~~~~~g~~~~~~~~~~~~~~~~~~~~D~kE~f~~~~~~~~~~-----~--~~p~~~~-~~p~fr~~~~~y~~~~~~La~ 172 (341)
T PLN02984 101 PLSYFWGTPALTPSGKALSRGPQESNVNWVEGFNIPLSSLSLL-----Q--TLSCSDP-KLESFRVLMEEYGKHLTRIAV 172 (341)
T ss_pred CCccccCcccccccccccccccccCCCCeeeEEeCcCCchhhh-----h--hcCCCCC-ccHHHHHHHHHHHHHHHHHHH
Confidence 12234443222 1111 12469999998864311000 0 0112222 357899999999999999999
Q ss_pred HHHHHHHHHcCCC--cccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC
Q 025269 158 KIMRGIALALGGS--PFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH 235 (255)
Q Consensus 158 ~ll~~i~~~Lgl~--~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~ 235 (255)
.||++||++||++ +++|.+.+ ..+.+.||++||||++. ++..+|+++|||+|+||||+|| .++||||+..
T Consensus 173 ~ll~~lA~~Lgl~~~~~~f~~~~-~~~~~~lRl~~YPp~~~------~~~~~g~~aHTD~g~lTlL~Qd-~v~GLQV~~~ 244 (341)
T PLN02984 173 TLFEAIAKTLSLELSGDQKMSYL-SESTGVIRVYRYPQCSN------EAEAPGMEVHTDSSVISILNQD-EVGGLEVMKD 244 (341)
T ss_pred HHHHHHHHHcCCCcchhHHHHHh-cCccceEEEEeCCCCCC------cccccCccCccCCCceEEEEeC-CCCCeeEeeC
Confidence 9999999999999 88887776 45567999999999973 4567899999999999999998 6999999754
Q ss_pred -CeeecCCCCCceeecCC
Q 025269 236 -LLLLVPGLGGSMDFHDS 252 (255)
Q Consensus 236 -~w~~V~~~~g~l~Vn~~ 252 (255)
+|++|||+||+||||.|
T Consensus 245 g~Wv~V~p~pgalVVNiG 262 (341)
T PLN02984 245 GEWFNVKPIANTLVVNLG 262 (341)
T ss_pred CceEECCCCCCeEEEECC
Confidence 79999999999999987
No 24
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=3.1e-49 Score=337.22 Aligned_cols=212 Identities=24% Similarity=0.343 Sum_probs=172.6
Q ss_pred CCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccCCC
Q 025269 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPA 86 (255)
Q Consensus 7 ~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~ 86 (255)
+||+|||+.+.. ..|.+++++|.+||++||||||+||||+.++++++++.+++||+||.++|. +.....
T Consensus 2 ~iPvIDls~~~~----------~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~-~~~~~~ 70 (303)
T PLN02403 2 EIPVIDFDQLDG----------EKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESF-YESEIA 70 (303)
T ss_pred CCCeEeCccCCc----------ccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHh-hccccc
Confidence 699999998742 246789999999999999999999999999999999999999999999996 221111
Q ss_pred CCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025269 87 TGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALA 166 (255)
Q Consensus 87 ~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~i~~~ 166 (255)
.++...+ ..+..|++|.|.++.. +....|.||+.+++||+.+++|++.|++++..||++|+++
T Consensus 71 ---~~~~~~~---~~~~~d~kE~~~~~~~-----------p~~~~~~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~ 133 (303)
T PLN02403 71 ---KALDNEG---KTSDVDWESSFFIWHR-----------PTSNINEIPNLSEDLRKTMDEYIAQLIKLAEKLSELMSEN 133 (303)
T ss_pred ---CcccccC---CCCCccHhhhcccccC-----------CccchhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1121111 1234589999987631 1124688998889999999999999999999999999999
Q ss_pred cCCCcccccccccC--CCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEc-CCeeecCCC
Q 025269 167 LGGSPFEFEGVRAG--DAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQF-HLLLLVPGL 243 (255)
Q Consensus 167 Lgl~~~~l~~~~~~--~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~-~~w~~V~~~ 243 (255)
||+++++|.+.+.. .+.+.+|++|||+++. ++..+|+++|||+|+||||+|++.++||||+. ++|++|||+
T Consensus 134 Lgl~~~~f~~~~~~~~~~~~~lrl~~YP~~~~------~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~~g~Wi~V~p~ 207 (303)
T PLN02403 134 LGLDKDYIKEAFSGNKGPSVGTKVAKYPECPR------PELVRGLREHTDAGGIILLLQDDQVPGLEFLKDGKWVPIPPS 207 (303)
T ss_pred cCCCHHHHHHHhccCCCccceeeeEcCCCCCC------cccccCccCccCCCeEEEEEecCCCCceEeccCCeEEECCCC
Confidence 99999999877642 3345699999999973 34567899999999999999974599999965 469999999
Q ss_pred C-CceeecCC
Q 025269 244 G-GSMDFHDS 252 (255)
Q Consensus 244 ~-g~l~Vn~~ 252 (255)
| |+||||.|
T Consensus 208 p~~~lvVNvG 217 (303)
T PLN02403 208 KNNTIFVNTG 217 (303)
T ss_pred CCCEEEEEeh
Confidence 9 69999986
No 25
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=4.9e-49 Score=336.81 Aligned_cols=210 Identities=28% Similarity=0.382 Sum_probs=168.5
Q ss_pred CCCCCCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhc
Q 025269 1 MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIK 80 (255)
Q Consensus 1 m~~~~~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~ 80 (255)
||.. .||+|||+.+. ..+++|.+||+++|||||+||||+.++++++++.+++||+||.|+|++
T Consensus 1 ~~~~--~iPvIDls~~~---------------~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~ 63 (300)
T PLN02365 1 MAEV--NIPTIDLEEFP---------------GQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRR 63 (300)
T ss_pred CCcC--CCCEEEChhhH---------------HHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhh
Confidence 5553 59999999862 135899999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCccceecccccccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 025269 81 IKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIM 160 (255)
Q Consensus 81 ~~~~~~~~~~GY~~~~~~~~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll 160 (255)
+... ...+||.+.+.. .+.+|.+.+.....+... . .-++.|| .+++||+.+++|++.|++++.+||
T Consensus 64 ~~~~--~~~~GY~~~~~~-----~~~~e~~~~~~~~~~~~~----~--~~~~~~~-~~~~fr~~~~~y~~~~~~l~~~ll 129 (300)
T PLN02365 64 NTDV--ILGSGYMAPSEV-----NPLYEALGLYDMASPQAV----D--TFCSQLD-ASPHQRETIKKYAKAIHDLAMDLA 129 (300)
T ss_pred ccCC--CCCCCCCCcCCC-----CCchhheecccccCchhh----h--hccccCC-CCchHHHHHHHHHHHHHHHHHHHH
Confidence 7532 235799876532 357788766521111000 0 0112233 457899999999999999999999
Q ss_pred HHHHHHcCC-CcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCeeEEeeCCCCCceeEEcC---C
Q 025269 161 RGIALALGG-SPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVQFH---L 236 (255)
Q Consensus 161 ~~i~~~Lgl-~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~---~ 236 (255)
++|+++||| ++++|.+. .+.||++|||+++. ++..+|+++|||+|+||||+||+.++||||+++ +
T Consensus 130 ~~la~~Lgl~~~~~f~~~-----~~~lr~~~YP~~p~------~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g~ 198 (300)
T PLN02365 130 RKLAESLGLVEGDFFQGW-----PSQFRINKYNFTPE------TVGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSGE 198 (300)
T ss_pred HHHHHHcCCCChHHHhhc-----ccceeeeecCCCCC------ccccccccCccCCCceEEEecCCCcCceEEEECCCCe
Confidence 999999999 77788653 36899999999973 456789999999999999999734899999863 6
Q ss_pred eeecCCCCCceeecCC
Q 025269 237 LLLVPGLGGSMDFHDS 252 (255)
Q Consensus 237 w~~V~~~~g~l~Vn~~ 252 (255)
|++|||+||++|||.|
T Consensus 199 Wi~V~p~pga~vVNiG 214 (300)
T PLN02365 199 FVPVDPLPGTLLVNLG 214 (300)
T ss_pred EEecCCCCCeEEEEhh
Confidence 9999999999999986
No 26
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.2e-38 Score=265.29 Aligned_cols=172 Identities=25% Similarity=0.405 Sum_probs=140.7
Q ss_pred HHHHHHhcC-CCHHHHhccccCCC-CCCccceecccc-c-ccCCCCcchhhhchhccccCcccccCCCCcCCCCCCCCCc
Q 025269 64 KNITQKFFD-LPYEEKIKIKLTPA-TGYRGYQRIGEN-I-TKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPP 139 (255)
Q Consensus 64 ~~~~~~fF~-lp~e~K~~~~~~~~-~~~~GY~~~~~~-~-~~g~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~ 139 (255)
.+.+++||+ ||.|+|+++..... ..++||.....+ . ..+..|++|.|.+... +.. ...+|.||+.++
T Consensus 2 ~~~~~~FF~~LP~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~~~d~kE~~~~~~~-p~~--------~~~~n~wP~~~~ 72 (262)
T PLN03001 2 RSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLLGAKDDTVLDWRDFFDHHTF-PLS--------RRNPSHWPDFPP 72 (262)
T ss_pred hHHHHHHHhhCCHHHHHHhhcCCCCCCccccccccccccCCCCccCchheeEeeec-Ccc--------ccchhhCCCCcH
Confidence 467999997 99999999976543 357899543221 1 1234689999987421 100 124799999889
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccCCee
Q 025269 140 NFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLT 219 (255)
Q Consensus 140 ~fr~~~~~y~~~~~~l~~~ll~~i~~~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lT 219 (255)
.||+.+++|++.|.+++.+||++|+++||+++++|.+.+ .+..+.+|++||||++. ++..+|+++|||+|+||
T Consensus 73 ~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~-~~~~~~lrl~~YP~~~~------~~~~~g~~~HtD~g~lT 145 (262)
T PLN03001 73 DYREVVGEYGDCMKALAQKLLAFISESLGLPCSCIEDAV-GDFYQNITVSYYPPCPQ------PELTLGLQSHSDFGAIT 145 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHh-cCcchhheeecCCCCCC------cccccCCcCCcCCCeeE
Confidence 999999999999999999999999999999999998776 34557899999999973 45789999999999999
Q ss_pred EEeeCCCCCceeEEcC-CeeecCCCCCceeecCC
Q 025269 220 LVNQDDDITALEVQFH-LLLLVPGLGGSMDFHDS 252 (255)
Q Consensus 220 lL~~d~~~~GLQv~~~-~w~~V~~~~g~l~Vn~~ 252 (255)
||+|| +++||||+.. +|++|+|+||++|||.|
T Consensus 146 lL~qd-~v~GLqV~~~g~Wi~V~p~p~a~vVNiG 178 (262)
T PLN03001 146 LLIQD-DVEGLQLLKDAEWLMVPPISDAILIIIA 178 (262)
T ss_pred EEEeC-CCCceEEeeCCeEEECCCCCCcEEEEcc
Confidence 99998 6999999754 69999999999999986
No 27
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.94 E-value=2.7e-27 Score=175.59 Aligned_cols=115 Identities=40% Similarity=0.683 Sum_probs=93.4
Q ss_pred CcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccCCCC
Q 025269 8 IPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPAT 87 (255)
Q Consensus 8 iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~ 87 (255)
||||||+. . .+.|..++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++... .
T Consensus 1 iPvIDls~-~----------~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~--~ 67 (116)
T PF14226_consen 1 IPVIDLSP-D----------PADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKYARS--P 67 (116)
T ss_dssp --EEEHGG-C----------HHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHHBCC--T
T ss_pred CCeEECCC-C----------CccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHhcCC--C
Confidence 79999997 1 247899999999999999999999999999999999999999999999999999544 3
Q ss_pred CCccceecccccccC-CCCcchhhhchhccccCcccccCCCCcCCCCCCCC
Q 025269 88 GYRGYQRIGENITKG-IPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLN 137 (255)
Q Consensus 88 ~~~GY~~~~~~~~~g-~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~ 137 (255)
.++||.+.+.+...+ ..|++|+|.++.+...+++. ...++++|.||+.
T Consensus 68 ~~~Gy~~~~~~~~~~~~~d~~E~~~~~~~~~~~~p~--~~~~~~~n~WP~~ 116 (116)
T PF14226_consen 68 SYRGYSPPGSESTDGGKPDWKESFNIGPDLPEDDPA--YPPLYGPNIWPDE 116 (116)
T ss_dssp TCSEEEESEEECCTTCCCCSEEEEEEECC-STTCHH--TGCTS-GGGS-TT
T ss_pred CCcccccCCccccCCCCCCceEEeEEECCCCccccc--cccccCCCCCCCC
Confidence 789999988766655 88999999998875433221 4456889999963
No 28
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.81 E-value=1.2e-19 Score=134.35 Aligned_cols=80 Identities=24% Similarity=0.568 Sum_probs=69.1
Q ss_pred CCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhccccCC
Q 025269 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTP 85 (255)
Q Consensus 6 ~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~ 85 (255)
.+||+|||+.+.++ + +.+.+++++|.+||++||||||+||||+.++++++++.+++||+||.++|+++...+
T Consensus 36 ~~iPvIDls~~~~~--~------~~~~~~~~~L~~A~~~~GFf~l~nhGi~~elid~~~~~~~~FF~LP~e~K~k~~~~~ 107 (120)
T PLN03176 36 NEIPVISIAGIDDG--G------EKRAEICNKIVEACEEWGVFQIVDHGVDAKLVSEMTTLAKEFFALPPEEKLRFDMSG 107 (120)
T ss_pred CCCCeEECccccCC--c------hHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHhcccCC
Confidence 37999999998642 1 346788999999999999999999999999999999999999999999999997665
Q ss_pred CCCCcccee
Q 025269 86 ATGYRGYQR 94 (255)
Q Consensus 86 ~~~~~GY~~ 94 (255)
. ...||..
T Consensus 108 ~-~~~gy~~ 115 (120)
T PLN03176 108 G-KKGGFIV 115 (120)
T ss_pred C-ccCCcch
Confidence 3 3558843
No 29
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.27 E-value=4e-12 Score=91.05 Aligned_cols=60 Identities=37% Similarity=0.478 Sum_probs=46.8
Q ss_pred cceEEcccCCCCCCCCCCCCCCcccccccccc--CCeeEEeeCCCCCceeEEcC-CeeecCCCCCceeecCCC
Q 025269 184 WVLRIIGYPGLSGAKDQKKPENNIGCGAHTDY--GLLTLVNQDDDITALEVQFH-LLLLVPGLGGSMDFHDSF 253 (255)
Q Consensus 184 ~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~--~~lTlL~~d~~~~GLQv~~~-~w~~V~~~~g~l~Vn~~~ 253 (255)
+.+|+++||+ + +...++++|+|. +++|+|+|+ .++||||+.. +|+.|++.+++++||.+-
T Consensus 2 ~~~~~~~Y~~-~--------~~~~~~~~H~D~~~~~~Til~~~-~~~gL~~~~~~~~~~v~~~~~~~~v~~G~ 64 (98)
T PF03171_consen 2 SQLRLNRYPP-P--------ENGVGIGPHTDDEDGLLTILFQD-EVGGLQVRDDGEWVDVPPPPGGFIVNFGD 64 (98)
T ss_dssp -EEEEEEE-S-C--------CGCEEEEEEEES--SSEEEEEET-STS-EEEEETTEEEE----TTCEEEEEBH
T ss_pred CEEEEEECCC-c--------ccCCceeCCCcCCCCeEEEEecc-cchheeccccccccCccCccceeeeecee
Confidence 4689999998 2 356789999999 999999997 6999999987 599999999999999763
No 30
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=87.00 E-value=3.8 Score=32.05 Aligned_cols=80 Identities=18% Similarity=-0.001 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHcCCCcccccccccCCCccceEEcccCCCCCCCCCCCCCCccccccccccC--------CeeEEee--
Q 025269 154 DLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYG--------LLTLVNQ-- 223 (255)
Q Consensus 154 ~l~~~ll~~i~~~Lgl~~~~l~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~--------~lTlL~~-- 223 (255)
.+...|.+.+...++++.. + ......+++++|.+-. ...+|.|.. .+|+++.
T Consensus 59 ~~~~~l~~~i~~~~~~~~~-~-----~~~~~~~~~~~Y~~g~------------~~~~H~D~~~~~~~~~r~~T~~~yLn 120 (178)
T smart00702 59 LVIERIRQRLADFLGLLRG-L-----PLSAEDAQVARYGPGG------------HYGPHVDNFEDDENGDRIATFLLYLN 120 (178)
T ss_pred HHHHHHHHHHHHHHCCCch-h-----hccCcceEEEEECCCC------------cccCcCCCCCCCCCCCeEEEEEEEec
Confidence 3555566666676776532 1 1122357899997642 356788866 6888764
Q ss_pred CCCCCc-eeEEcCC---eeecCCCCCceeecC
Q 025269 224 DDDITA-LEVQFHL---LLLVPGLGGSMDFHD 251 (255)
Q Consensus 224 d~~~~G-LQv~~~~---w~~V~~~~g~l~Vn~ 251 (255)
+...|| |.+.... ...|.|..|.++|-.
T Consensus 121 ~~~~GG~~~f~~~~~~~~~~v~P~~G~~v~f~ 152 (178)
T smart00702 121 DVEEGGELVFPGLGLMVCATVKPKKGDLLFFP 152 (178)
T ss_pred cCCcCceEEecCCCCccceEEeCCCCcEEEEe
Confidence 322344 7776543 468899999888743
No 31
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=85.10 E-value=0.51 Score=33.16 Aligned_cols=45 Identities=27% Similarity=0.143 Sum_probs=28.0
Q ss_pred cccccccc-----CCeeEEee--CC----CCCceeEEcC-----CeeecC-----CCCCceeecCC
Q 025269 208 GCGAHTDY-----GLLTLVNQ--DD----DITALEVQFH-----LLLLVP-----GLGGSMDFHDS 252 (255)
Q Consensus 208 ~~~~HtD~-----~~lTlL~~--d~----~~~GLQv~~~-----~w~~V~-----~~~g~l~Vn~~ 252 (255)
.+.+|+|. ..+|+|+. +. ..|.|++... ....++ |.+|+++|=.+
T Consensus 11 ~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F~~ 76 (100)
T PF13640_consen 11 FFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIFPS 76 (100)
T ss_dssp EEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEEES
T ss_pred EEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEEeC
Confidence 57899998 58888853 21 1256888852 344555 99999987544
No 32
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=74.99 E-value=4.4 Score=32.14 Aligned_cols=37 Identities=30% Similarity=0.442 Sum_probs=29.0
Q ss_pred CCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 7 ~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.||++++.... -.++++.+.+++++...+.|.|||+-
T Consensus 120 ~v~v~~~~~~g-------------~~~la~~~~~~l~~~~~vll~nHGv~ 156 (184)
T PRK08333 120 KIPILPFRPAG-------------SVELAEQVAEAMKEYDAVIMERHGIV 156 (184)
T ss_pred CEeeecCCCCC-------------cHHHHHHHHHHhccCCEEEEcCCCCE
Confidence 57888776431 25788899999998889999999974
No 33
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=74.96 E-value=3.9 Score=36.76 Aligned_cols=53 Identities=17% Similarity=0.293 Sum_probs=37.8
Q ss_pred CCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcC
Q 025269 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFD 72 (255)
Q Consensus 6 ~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 72 (255)
..||+|||+++.++ ...++..+..++.|++.|.|. |+.+......+..++|.+
T Consensus 48 ~~IP~i~f~di~~~-------------~~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~~ 100 (416)
T PF07350_consen 48 SIIPEIDFADIENG-------------GVSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYLK 100 (416)
T ss_dssp -SS-EEEHHHHHCT----------------HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHHH
T ss_pred CCCceeeHHHHhCC-------------CCCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 37999999999753 346778888999999999885 777777777777777654
No 34
>PRK08130 putative aldolase; Validated
Probab=74.59 E-value=4.6 Score=32.84 Aligned_cols=25 Identities=12% Similarity=0.147 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.++++++.+++++...+.+.|||+-
T Consensus 139 ~~la~~~~~~l~~~~~vll~nHGvi 163 (213)
T PRK08130 139 PAIAEALAGLAARYRAVLLANHGPV 163 (213)
T ss_pred HHHHHHHHHHhccCCEEEEcCCCCe
Confidence 5789999999999999999999974
No 35
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=72.48 E-value=6.5 Score=34.84 Aligned_cols=52 Identities=17% Similarity=0.243 Sum_probs=38.8
Q ss_pred CCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcC
Q 025269 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFD 72 (255)
Q Consensus 6 ~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 72 (255)
+.+|.||++.+.+. .+...++.+++.++|++.+.+-+++.+. +.+.+++|-.
T Consensus 108 ~~~~~~d~~~~~~~------------~~~~~~~~~~l~~~G~v~~rg~~~~~~~---~~~~~~~~G~ 159 (366)
T TIGR02409 108 LSLPKFDHEAVMKD------------DSVLLDWLSAVRDVGIAVLKGAPTKPGA---VEKLGKRIGF 159 (366)
T ss_pred ccCCceeHHHHhCC------------HHHHHHHHHHHHhccEEEEeCCCCCHHH---HHHHHHHhcc
Confidence 46888898887531 3567889999999999999999887653 4455666644
No 36
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=67.01 E-value=8 Score=31.64 Aligned_cols=25 Identities=16% Similarity=0.235 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.++++++.+++++...+.|.|||+-
T Consensus 139 ~ela~~v~~~l~~~~~vlL~nHGv~ 163 (217)
T PRK05874 139 PEVGRNAVRALEGRAAALIANHGLV 163 (217)
T ss_pred HHHHHHHHHHhCcCCEEEEcCCCCe
Confidence 5789999999999999999999974
No 37
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=66.22 E-value=30 Score=28.57 Aligned_cols=26 Identities=15% Similarity=-0.124 Sum_probs=18.8
Q ss_pred CCceeEEcC-CeeecCCCCCceeecCC
Q 025269 227 ITALEVQFH-LLLLVPGLGGSMDFHDS 252 (255)
Q Consensus 227 ~~GLQv~~~-~w~~V~~~~g~l~Vn~~ 252 (255)
.|.|.+.+. .-..|+|..|.+||=.+
T Consensus 129 GGEl~~~~~~g~~~Vkp~aG~~vlfps 155 (226)
T PRK05467 129 GGELVIEDTYGEHRVKLPAGDLVLYPS 155 (226)
T ss_pred CCceEEecCCCcEEEecCCCeEEEECC
Confidence 455888865 24678889999988554
No 38
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=62.11 E-value=12 Score=30.55 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.++++++.+++.+...+.+.|||+-
T Consensus 134 ~~la~~~~~~l~~~~~vLl~nHGv~ 158 (215)
T PRK08087 134 RELSEHVALALKNRKATLLQHHGLI 158 (215)
T ss_pred HHHHHHHHHHhCcCCEEEecCCCCE
Confidence 4778889999988889999999974
No 39
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=62.07 E-value=13 Score=29.32 Aligned_cols=25 Identities=24% Similarity=0.368 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.++++.+.+++.+.-.+.|.|||+-
T Consensus 126 ~~la~~v~~~l~~~~~vll~nHG~~ 150 (181)
T PRK08660 126 GELAENVARALSEHKGVVVRGHGTF 150 (181)
T ss_pred HHHHHHHHHHHhhCCEEEEcCCCce
Confidence 5788899999999999999999974
No 40
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=61.76 E-value=6.3 Score=31.05 Aligned_cols=38 Identities=13% Similarity=0.390 Sum_probs=29.1
Q ss_pred CCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHH-hcceEEEEcCCCC
Q 025269 6 KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACK-EAGFFYVKGHGIP 56 (255)
Q Consensus 6 ~~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~-~~Gff~l~nhgi~ 56 (255)
..||+|++....+ .+++++|.++++ +...+.+.|||+-
T Consensus 122 ~~v~~~~~~~~~~-------------~~l~~~i~~~l~~~~~~vll~nHG~~ 160 (184)
T PF00596_consen 122 GEVPVVPYAPPGS-------------EELAEAIAEALGEDRKAVLLRNHGVV 160 (184)
T ss_dssp SCEEEE-THSTTC-------------HHHHHHHHHHHTCTSSEEEETTTEEE
T ss_pred ccceeeccccccc-------------hhhhhhhhhhhcCCceEEeecCCceE
Confidence 4688888876321 466889999999 8899999999963
No 41
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=59.53 E-value=12 Score=30.46 Aligned_cols=25 Identities=12% Similarity=0.236 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.++++.+.+++.+...+.+.|||+-
T Consensus 136 ~~la~~v~~~l~~~~~vll~nHGv~ 160 (214)
T PRK06833 136 KELAENAFEAMEDRRAVLLANHGLL 160 (214)
T ss_pred HHHHHHHHHHhCcCCEEEECCCCCE
Confidence 5778889999999999999999974
No 42
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=55.23 E-value=17 Score=30.96 Aligned_cols=25 Identities=8% Similarity=0.179 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.++++.+.+++++...+.+.|||+-
T Consensus 191 ~eLa~~v~~~l~~~~avLL~nHGvv 215 (274)
T PRK03634 191 DEIGQATAEKMQKHDLVLWPKHGVF 215 (274)
T ss_pred HHHHHHHHHHhccCCEEEEcCCCCe
Confidence 5788889999998899999999975
No 43
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=54.27 E-value=49 Score=27.73 Aligned_cols=43 Identities=19% Similarity=0.286 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHHHhcce--EEEE-cCCCChHHHHHHHHHHHHhcC
Q 025269 30 GVSQVVKQLDKACKEAGF--FYVK-GHGIPESLINDVKNITQKFFD 72 (255)
Q Consensus 30 ~~~~~~~~l~~A~~~~Gf--f~l~-nhgi~~~~~~~~~~~~~~fF~ 72 (255)
.-......+.+++..+|| |+++ +||=....+..+.+..+..+.
T Consensus 87 t~~~~~~~~~~Sl~~~Gfrk~v~vNgHGGN~~~l~~v~~el~~~~~ 132 (250)
T COG1402 87 TLIALLVELVESLARHGFRKFVIVNGHGGNSAALEIVARELRAELG 132 (250)
T ss_pred HHHHHHHHHHHHHHhcCccEEEEEecCCCcHHHHHHHHHHHHHhcc
Confidence 456778889999999999 5555 588887777777666655543
No 44
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=53.89 E-value=16 Score=29.70 Aligned_cols=25 Identities=8% Similarity=0.182 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.++++.+.+++.+...+.|.|||+-
T Consensus 133 ~~la~~v~~~~~~~~~vLL~nHG~~ 157 (214)
T TIGR01086 133 TKLASEVVAGILKSKAILLLHHGLI 157 (214)
T ss_pred HHHHHHHHHHhhhCCEEehhcCCCE
Confidence 4678888888888899999999974
No 45
>PF11548 Receptor_IA-2: Protein-tyrosine phosphatase receptor IA-2; InterPro: IPR021613 IA-2 is a protein-tyrosine phosphatase receptor that upon exocytosis, the cytoplasmic domain is cleaved and moves to the nucleus where it enhances transcription of the insulin gene. The mature exodomain of IA-2 participates in adhesion to the extracellular matrix and is self-proteolyzed in vitro by reactive oxygen species which may be a new shedding mechanism. ; PDB: 2QT7_B 3N01_B 3N4W_B 3NG8_A.
Probab=52.88 E-value=17 Score=25.30 Aligned_cols=36 Identities=14% Similarity=0.093 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHcCCCcccccccccCCCccceEEcc
Q 025269 155 LSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIG 190 (255)
Q Consensus 155 l~~~ll~~i~~~Lgl~~~~l~~~~~~~~~~~lr~~~ 190 (255)
=+.+||+.+++.|+|+.++|.+.-...+.-++|+-.
T Consensus 18 ~G~~l~~~la~~l~l~s~~F~~i~V~g~avTFrv~~ 53 (91)
T PF11548_consen 18 EGSRLMEKLAELLHLPSSSFINISVVGPAVTFRVRP 53 (91)
T ss_dssp HHHHHHHHHHHHHTS-GGGEEEEEEETTEEEEEE--
T ss_pred HHHHHHHHHHHHhCCCcccceeeeecCceEEEEecc
Confidence 367899999999999999998775556666677643
No 46
>PRK06755 hypothetical protein; Validated
Probab=51.33 E-value=21 Score=29.08 Aligned_cols=37 Identities=16% Similarity=0.250 Sum_probs=27.9
Q ss_pred CCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 7 ~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.||+|.+... ..+++++.+.+++++...+.|.|||+-
T Consensus 136 ~IPiv~~~~~-------------~~~~la~~~~~~~~~~~avLl~~HGv~ 172 (209)
T PRK06755 136 TIPIVEDEKK-------------FADLLENNVPNFIEGGGVVLVHNYGMI 172 (209)
T ss_pred EEEEEeCCCc-------------hhHHHHHHHHhhccCCCEEEEcCCCeE
Confidence 4888887542 125677777788888889999999974
No 47
>PRK06357 hypothetical protein; Provisional
Probab=51.09 E-value=27 Score=28.53 Aligned_cols=25 Identities=24% Similarity=0.387 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHhc------ceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEA------GFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~------Gff~l~nhgi~ 56 (255)
.++++.+.+++++. ..+.+.|||+-
T Consensus 142 ~ela~~v~~~l~~~~~~~~~~~vLl~nHGvv 172 (216)
T PRK06357 142 PELAEIVRKHLIELGDKAVPSAFLLNSHGIV 172 (216)
T ss_pred HHHHHHHHHHHhhcCcccCCCEEEECCCCCe
Confidence 57888888888765 48889999974
No 48
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=50.40 E-value=97 Score=26.91 Aligned_cols=13 Identities=23% Similarity=0.151 Sum_probs=10.4
Q ss_pred eeecCCCCCceee
Q 025269 237 LLLVPGLGGSMDF 249 (255)
Q Consensus 237 w~~V~~~~g~l~V 249 (255)
-+.|+|+.|..++
T Consensus 205 gl~VkPkkG~ALl 217 (310)
T PLN00052 205 GLAVKPVKGDAVL 217 (310)
T ss_pred CeEeccCcceEEE
Confidence 3789999997776
No 49
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=49.27 E-value=28 Score=29.48 Aligned_cols=25 Identities=20% Similarity=0.228 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.++++.+.+++++...+.+.|||+-
T Consensus 189 ~eLA~~v~~~l~~~~avLL~nHGvv 213 (270)
T TIGR02624 189 NEIGEATAEKMKEHRLVLWPHHGIF 213 (270)
T ss_pred HHHHHHHHHHhccCCEEEEcCCCCe
Confidence 5889999999999999999999974
No 50
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=48.43 E-value=20 Score=29.23 Aligned_cols=25 Identities=12% Similarity=0.191 Sum_probs=20.9
Q ss_pred HHHHHHHHHHH--HhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKAC--KEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~--~~~Gff~l~nhgi~ 56 (255)
.++++++.+++ .+...+.+.|||+-
T Consensus 142 ~ela~~i~~~l~~~~~~~vll~nHG~~ 168 (221)
T PRK06557 142 EAIGKGIVETLKGGRSPAVLMQNHGVF 168 (221)
T ss_pred HHHHHHHHHHhCcCCCCEEEECCCCce
Confidence 46788888888 77888999999975
No 51
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=47.73 E-value=38 Score=28.67 Aligned_cols=39 Identities=18% Similarity=0.323 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDL 73 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 73 (255)
.+..++|.+++.++|++.+.|..++. +...+.+++|-.+
T Consensus 27 ~~~~~~l~~~l~~~Gvlvfr~q~l~~---~~~~~~~~~~G~~ 65 (277)
T PRK09553 27 DNQFEQLYHALLRHQVLFFRDQPITP---QQQRDLAARFGDL 65 (277)
T ss_pred HHHHHHHHHHHHHCCEEEECCCCCCH---HHHHHHHHHhCCC
Confidence 35678899999999999999998885 4555567777654
No 52
>PF11243 DUF3045: Protein of unknown function (DUF3045); InterPro: IPR021405 This entry is represented by Bacteriophage T4, Gp30.1; it is a family of uncharacterised viral proteins.
Probab=47.19 E-value=17 Score=24.40 Aligned_cols=22 Identities=32% Similarity=0.504 Sum_probs=17.1
Q ss_pred HHHHHHHHHhcceEEEEcCCCC
Q 025269 35 VKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 35 ~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
-+.|...|-+.||+||.-|-+.
T Consensus 35 D~~if~eCVeqGFiYVs~~~~~ 56 (89)
T PF11243_consen 35 DEPIFKECVEQGFIYVSKYWMD 56 (89)
T ss_pred ccHHHHHHHhcceEEEEeeeec
Confidence 3458889999999999766443
No 53
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=44.69 E-value=31 Score=27.53 Aligned_cols=25 Identities=12% Similarity=0.327 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHH---hcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACK---EAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~---~~Gff~l~nhgi~ 56 (255)
.++++.+.++++ +...+.|.|||+-
T Consensus 137 ~ela~~~~~~l~~~~~~~avll~nHGv~ 164 (193)
T TIGR03328 137 ARLADSVAPYLEAYPDVPGVLIRGHGLY 164 (193)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEcCCcce
Confidence 578889999986 4789999999974
No 54
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=44.21 E-value=40 Score=29.82 Aligned_cols=52 Identities=12% Similarity=0.209 Sum_probs=36.8
Q ss_pred CCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcC
Q 025269 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFD 72 (255)
Q Consensus 7 ~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 72 (255)
.+|.+|+..+.+. + .+...++.+++.++|++.+.|-+++.+.. .+.+++|..
T Consensus 100 ~~~~~~~~~~~~~--~---------d~~l~~~l~~l~~~G~v~~~g~~~~~~~~---~~~a~riG~ 151 (362)
T TIGR02410 100 KDPSVHFKTTYDH--T---------DSTLKSFSKNIYKYGFTFVDNVPVTPEAT---EKLCERISI 151 (362)
T ss_pred cCCceeHHHHhcc--C---------HHHHHHHHHHHHhhCEEEEcCCCCCHHHH---HHHHHHhcc
Confidence 3577777766531 0 24588899999999999999999876544 444666643
No 55
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=40.25 E-value=22 Score=28.72 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=27.9
Q ss_pred CCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 7 ~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.||++++..... .-.++++.+.+++.+.-.+.+.|||+-
T Consensus 122 ~ip~~~~~~~~~-----------~~~~la~~~~~~l~~~~~vll~nHG~~ 160 (209)
T cd00398 122 DIPCTPYMTPET-----------GEDEIGTQRALGFPNSKAVLLRNHGLF 160 (209)
T ss_pred CeeecCCcCCCc-----------cHHHHHHHHhcCCCcCCEEEEcCCCCe
Confidence 578887765421 124667777778888889999999974
No 56
>PF01471 PG_binding_1: Putative peptidoglycan binding domain; InterPro: IPR002477 This entry represents peptidoglycan binding domain (PGBD), as well as related domains that share the same structure. PGBD may have a general peptidoglycan binding function, has a core structure consisting of a closed, three-helical bundle with a left-handed twist. It is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [, , ]. Examples are: Muramoyl-pentapeptide carboxypeptidase (3.4.17.8 from EC) N-acetylmuramoyl-L-alanine amidase cwlA precursor (cell wall hydrolase, autolysin, 3.5.1.28 from EC) Autolytic lysozyme (1,4-beta-N-acetylmuramidase, autolysin, 3.2.1.17 from EC) Membrane-bound lytic murein transglycosylase B Zinc-containing D-alanyl-D-alanine-cleaving carboxypeptidase, VanX []. Many of the proteins having this domain are as yet uncharacterised. However, some are known to belong to MEROPS peptidase family M15 (clan MD), subfamily M15A metallopeptidases. A number of the proteins belonging to subfamily M15A are non-peptidase homologues as they either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Eukaryotic enzymes can contain structurally similar PGBD-like domains. Matrix metalloproteinases (MMP), which catalyse extracellular matrix degradation, have N-terminal domains that resemble PGBD. Examples are gelatinase A (MMP-2), which degrades type IV collagen [], stromelysin-1 (MMP-3), which plays a role in arthritis and tumour invasion [, ], and gelatinase B (MMP-9) secreted by neutrophils as part of the innate immune defence mechanism []. Several MMPs are implicated in cancer progression, since degradation of the extracellular matrix is an essential step in the cascade of metastasis [].; GO: 0008152 metabolic process; PDB: 1L6J_A 3BKH_A 3BKV_A 1GXD_A 1EAK_D 1CK7_A 1SLM_A 1LBU_A 1SU3_B.
Probab=39.02 E-value=49 Score=20.18 Aligned_cols=41 Identities=24% Similarity=0.254 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCC
Q 025269 34 VVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLP 74 (255)
Q Consensus 34 ~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp 74 (255)
.++.|...+...||......|+-......+++.-++.+.|+
T Consensus 4 ~v~~lq~~L~~~gy~~~~~~g~~~~~t~~Av~~fQ~~~gL~ 44 (57)
T PF01471_consen 4 DVKALQQYLNRLGYYPGPVDGIFDPETREAVKAFQKANGLP 44 (57)
T ss_dssp HHHHHHHHHHHTTTT-SSTTSBSHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHcCCCCCCCCCCcCHHHHHHHHHHHHHcCcC
Confidence 47788899999999955556777777777777766666664
No 57
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=38.61 E-value=56 Score=25.60 Aligned_cols=46 Identities=9% Similarity=-0.190 Sum_probs=35.3
Q ss_pred cccccccc----CCeeEEeeCC---CCCceeEEcC-----CeeecCCCCCceeecCCC
Q 025269 208 GCGAHTDY----GLLTLVNQDD---DITALEVQFH-----LLLLVPGLGGSMDFHDSF 253 (255)
Q Consensus 208 ~~~~HtD~----~~lTlL~~d~---~~~GLQv~~~-----~w~~V~~~~g~l~Vn~~~ 253 (255)
....|+|. ...|+++.-. -.+|+-+... --+.|.+.||+++|-.+.
T Consensus 86 ~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g~~~~~~~GtVl~~~~~ 143 (171)
T PF12851_consen 86 CTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILGVAFAYQPGTVLIFCAK 143 (171)
T ss_pred CccceecCCCCCCCeEEEEecCCccccCceEeccccccccCCEEEecCCCcEEEEccc
Confidence 45779998 7788887631 2467777777 699999999999997765
No 58
>PRK05834 hypothetical protein; Provisional
Probab=37.44 E-value=46 Score=26.66 Aligned_cols=24 Identities=21% Similarity=0.372 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhcc--eEEEEcCCCC
Q 025269 33 QVVKQLDKACKEAG--FFYVKGHGIP 56 (255)
Q Consensus 33 ~~~~~l~~A~~~~G--ff~l~nhgi~ 56 (255)
..++.+.+++++.. .+.|.|||+-
T Consensus 136 ~la~~v~~~l~~~~~~avLL~nHGvv 161 (194)
T PRK05834 136 RADTEILRYLQEKNKNFVVIKGYGVY 161 (194)
T ss_pred hHHHHHHHHHhhcCCCEEEEcCCcce
Confidence 45777888888755 9999999964
No 59
>PRK07490 hypothetical protein; Provisional
Probab=36.53 E-value=43 Score=27.89 Aligned_cols=25 Identities=12% Similarity=0.170 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.++++.|.+++.+.-.+.|.|||+-
T Consensus 146 ~ela~~v~~~l~~~~avlL~nHG~v 170 (245)
T PRK07490 146 EEEGERLAGLLGDKRRLLMGNHGVL 170 (245)
T ss_pred HHHHHHHHHHhCcCCEEEECCCCcE
Confidence 4788999999999999999999974
No 60
>PF08823 PG_binding_2: Putative peptidoglycan binding domain; InterPro: IPR014927 This entry may be a peptidoglycan binding domain.
Probab=34.85 E-value=69 Score=21.33 Aligned_cols=37 Identities=16% Similarity=0.318 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHH
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQ 68 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~ 68 (255)
.++++.|.++++..||..=..||.-++...+++..-.
T Consensus 15 ~~~~~evq~~L~~lGyy~g~~~g~~d~a~~~Al~~~~ 51 (74)
T PF08823_consen 15 GDVAREVQEALKRLGYYKGEADGVWDEATEDALRAWA 51 (74)
T ss_pred HHHHHHHHHHHHHcCCccCCCCCcccHHHHHHHHHHH
Confidence 5789999999999999777778877776666655443
No 61
>cd00379 Ribosomal_L10_P0 Ribosomal protein L10 family; composed of the large subunit ribosomal protein called L10 in bacteria, P0 in eukaryotes, and L10e in archaea, as well as uncharacterized P0-like eukaryotic proteins. In all three kingdoms, L10 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been sho
Probab=33.15 E-value=1.5e+02 Score=22.36 Aligned_cols=39 Identities=13% Similarity=0.242 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhcceEEEEc-CCCChHHHHHHHHHHHH
Q 025269 31 VSQVVKQLDKACKEAGFFYVKG-HGIPESLINDVKNITQK 69 (255)
Q Consensus 31 ~~~~~~~l~~A~~~~Gff~l~n-hgi~~~~~~~~~~~~~~ 69 (255)
+..+++++.+.+++..++++.+ +|++...+..+-...+.
T Consensus 3 K~~~v~~l~~~l~~~~~v~v~~~~~l~~~~~~~lR~~l~~ 42 (155)
T cd00379 3 KEELVEELKELLKKYKSVVVVDYRGLTVAQLTELRKELRE 42 (155)
T ss_pred hHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 5678999999999998888876 58888777666555543
No 62
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=32.45 E-value=91 Score=22.72 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhcceEEEEc-CCCChHHHHHHHHHHHH
Q 025269 33 QVVKQLDKACKEAGFFYVKG-HGIPESLINDVKNITQK 69 (255)
Q Consensus 33 ~~~~~l~~A~~~~Gff~l~n-hgi~~~~~~~~~~~~~~ 69 (255)
+.+....+.|.++|.=.|++ .|.+++.++.+-++++.
T Consensus 78 ~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~ 115 (124)
T PF01113_consen 78 DAVYDNLEYALKHGVPLVIGTTGFSDEQIDELEELAKK 115 (124)
T ss_dssp HHHHHHHHHHHHHT-EEEEE-SSSHHHHHHHHHHHTTT
T ss_pred HHhHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHHhcc
Confidence 45666777777789999986 48888877777766654
No 63
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=31.06 E-value=72 Score=27.31 Aligned_cols=30 Identities=20% Similarity=0.490 Sum_probs=24.8
Q ss_pred HHHHHHhcceEEEEcCCCChHHHHHHHHHHHH
Q 025269 38 LDKACKEAGFFYVKGHGIPESLINDVKNITQK 69 (255)
Q Consensus 38 l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~ 69 (255)
..+++++.|||.|.| +|..++..+.+....
T Consensus 17 Al~~lED~Gy~cvDN--lP~~Ll~~l~~~~~~ 46 (284)
T PF03668_consen 17 ALRALEDLGYYCVDN--LPPSLLPQLIELLAQ 46 (284)
T ss_pred HHHHHHhcCeeEEcC--CcHHHHHHHHHHHHh
Confidence 357899999999999 888888888777653
No 64
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=30.25 E-value=79 Score=24.75 Aligned_cols=55 Identities=11% Similarity=-0.020 Sum_probs=31.9
Q ss_pred ceEEcccCCCCCCCCCCCCCCccccccccccCCee----EEe-eCCCCCc-eeEEc----CCeeecCCCCCceeecCC
Q 025269 185 VLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLT----LVN-QDDDITA-LEVQF----HLLLLVPGLGGSMDFHDS 252 (255)
Q Consensus 185 ~lr~~~Yp~~~~~~~~~~~~~~~~~~~HtD~~~lT----lL~-~d~~~~G-LQv~~----~~w~~V~~~~g~l~Vn~~ 252 (255)
..-+|+|++-+ ++++|.|-.-+. |.. .- +... +.+.. ...+.+...+|.++|..+
T Consensus 96 ~~LvN~Y~~Gd------------~mg~H~D~~e~~~~~pI~SvSL-G~~r~F~~~~~~~~~~~~~l~L~sGsllvM~G 160 (169)
T TIGR00568 96 ACLVNRYAPGA------------TLSLHQDRDEPDLRAPLLSVSL-GLPAIFLIGGLKRNDPPKRLRLHSGDVVIMGG 160 (169)
T ss_pred EEEEEeecCCC------------ccccccccccccCCCCEEEEeC-CCCEEEEecCCcCCCceEEEEeCCCCEEEECC
Confidence 34589997542 589999953221 111 11 1111 22322 137889999999999865
No 65
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=29.91 E-value=1.3e+02 Score=24.66 Aligned_cols=38 Identities=13% Similarity=0.257 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHHhcceEEE---EcCCCChHHHHHHHHHH
Q 025269 30 GVSQVVKQLDKACKEAGFFYV---KGHGIPESLINDVKNIT 67 (255)
Q Consensus 30 ~~~~~~~~l~~A~~~~Gff~l---~nhgi~~~~~~~~~~~~ 67 (255)
.-..+...+.+++.++||=.+ .+||=....++.+.+..
T Consensus 83 t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~~~l 123 (237)
T PF02633_consen 83 TLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAAREL 123 (237)
T ss_dssp HHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHHHHH
Confidence 456788888999999998443 47887665555554433
No 66
>COG1010 CobJ Precorrin-3B methylase [Coenzyme metabolism]
Probab=28.41 E-value=1.8e+02 Score=24.24 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=34.3
Q ss_pred CCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChH---HHHHHHHHHHH
Q 025269 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPES---LINDVKNITQK 69 (255)
Q Consensus 7 ~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~---~~~~~~~~~~~ 69 (255)
..-+|+||++.-+ ++.+-++|..|.+ -+|+.+.-.+++.. .+.++++.-++
T Consensus 129 DF~~ISLSDlLtP-----------we~IekRl~aAA~-adfVi~~YNP~s~~R~~~~~~a~eil~~ 182 (249)
T COG1010 129 DFCVISLSDLLTP-----------WEVIEKRLRAAAE-ADFVIALYNPISKRRPEQLGRAFEILRE 182 (249)
T ss_pred ceEEEEhHhcCCc-----------HHHHHHHHHHHhh-CCEEEEEECCccccchHHHHHHHHHHHH
Confidence 4567999998742 6677777766665 59999988888764 44444444444
No 67
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=27.89 E-value=1.1e+02 Score=25.43 Aligned_cols=49 Identities=12% Similarity=0.297 Sum_probs=35.6
Q ss_pred CCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHh
Q 025269 7 SIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKF 70 (255)
Q Consensus 7 ~iPvIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f 70 (255)
.+|.+++..+.+. .....++.+++.++|+..+.+-....+. +...++.|
T Consensus 18 ~~~~~~~~~~~~~------------~~~~~~~l~~~~~~g~~~~~~~~~~~~~---~~~~~~~~ 66 (262)
T cd00250 18 ALPVLSFLEVLEL------------DSPLGKLLLASAGVGFAELEGAPLDPAA---LLGLAERI 66 (262)
T ss_pred CCCcccHHHHhcC------------HHHHHHHHHHHHHhcEEEEeCCCCCHHH---HHHHHHHh
Confidence 5688888776542 3467789999999999999998776543 44556665
No 68
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=27.87 E-value=58 Score=26.32 Aligned_cols=25 Identities=20% Similarity=0.545 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHH-hcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACK-EAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~-~~Gff~l~nhgi~ 56 (255)
.++++.+.++++ +...+.+.|||+-
T Consensus 148 ~eLa~~v~~~l~~~~~avLl~nHG~v 173 (208)
T PRK06754 148 PTLAEEFAKHIQGDSGAVLIRNHGIT 173 (208)
T ss_pred HHHHHHHHHHhccCCcEEEECCCceE
Confidence 578999999997 8889999999974
No 69
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=27.85 E-value=66 Score=25.87 Aligned_cols=25 Identities=12% Similarity=0.349 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhcc---eEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAG---FFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~G---ff~l~nhgi~ 56 (255)
+++++.+.+++++.. .+.|.|||+-
T Consensus 145 ~eLa~~v~~~l~~~~~~~avlL~nHGvi 172 (204)
T PRK09220 145 ARLAARVAPYLDAQPLRYGYLIRGHGLY 172 (204)
T ss_pred HHHHHHHHHHHHhCCCCcEEEECCCceE
Confidence 678999999998864 8999999964
No 70
>PRK15331 chaperone protein SicA; Provisional
Probab=27.84 E-value=61 Score=25.32 Aligned_cols=43 Identities=21% Similarity=0.387 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCC
Q 025269 30 GVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDL 73 (255)
Q Consensus 30 ~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 73 (255)
+..++++.|.+|+.+ |--.-.-|||+++.++.++..+..||..
T Consensus 8 ~~~~~~~~i~~al~~-G~tlk~l~gis~~~le~iY~~Ay~~y~~ 50 (165)
T PRK15331 8 SEERVAEMIWDAVSE-GATLKDVHGIPQDMMDGLYAHAYEFYNQ 50 (165)
T ss_pred hHHHHHHHHHHHHHC-CCCHHHHhCCCHHHHHHHHHHHHHHHHC
Confidence 456789999999987 6433446899999999999999999953
No 71
>PRK07044 aldolase II superfamily protein; Provisional
Probab=27.28 E-value=87 Score=26.16 Aligned_cols=25 Identities=12% Similarity=0.163 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.+.++.+.+++.+...+.|.|||+-
T Consensus 151 ~e~~~~va~~l~~~~avLL~nHGvi 175 (252)
T PRK07044 151 LDEGERLVADLGDKPAMLLRNHGLL 175 (252)
T ss_pred HHHHHHHHHHhccCCEEEECCCCce
Confidence 3557888888888899999999974
No 72
>PRK04596 minC septum formation inhibitor; Reviewed
Probab=26.89 E-value=1.6e+02 Score=24.65 Aligned_cols=48 Identities=15% Similarity=0.005 Sum_probs=32.2
Q ss_pred CCCcE-EeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHH
Q 025269 6 KSIPI-IDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDV 63 (255)
Q Consensus 6 ~~iPv-IDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~ 63 (255)
...|+ ||++.+..... ..-...|.+.|+++|++-|--.|-..+..+.+
T Consensus 49 ~~~PvVlDl~~l~~~~~----------~~dl~~L~~~Lr~~gl~~vGV~g~~~~~~~~a 97 (248)
T PRK04596 49 GRAAVILDFGGLSQVPD----------LATAKALLDGLRSAGVLPVALAYGTSEIDLLS 97 (248)
T ss_pred CCCcEEEEchhhcCccc----------cccHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 45565 79999853110 01256699999999999998888776654443
No 73
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=26.50 E-value=1e+02 Score=19.18 Aligned_cols=25 Identities=8% Similarity=0.044 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCccccc
Q 025269 151 LCTDLSRKIMRGIALALGGSPFEFE 175 (255)
Q Consensus 151 ~~~~l~~~ll~~i~~~Lgl~~~~l~ 175 (255)
.-++|+..|.+++++.+|.|++.+.
T Consensus 16 qK~~L~~~it~a~~~~~~~p~~~v~ 40 (60)
T PRK02289 16 QKNALAREVTEVVSRIAKAPKEAIH 40 (60)
T ss_pred HHHHHHHHHHHHHHHHhCcCcceEE
Confidence 4457888999999999999876654
No 74
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=26.44 E-value=1.1e+02 Score=18.91 Aligned_cols=25 Identities=20% Similarity=0.256 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCccccc
Q 025269 151 LCTDLSRKIMRGIALALGGSPFEFE 175 (255)
Q Consensus 151 ~~~~l~~~ll~~i~~~Lgl~~~~l~ 175 (255)
.-.+++..|..++++.||.+++...
T Consensus 15 ~K~~l~~~it~~~~~~lg~~~~~i~ 39 (60)
T PF01361_consen 15 QKRELAEAITDAVVEVLGIPPERIS 39 (60)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGEE
T ss_pred HHHHHHHHHHHHHHHHhCcCCCeEE
Confidence 4567888899999999999876543
No 75
>PF02668 TauD: Taurine catabolism dioxygenase TauD, TfdA family; InterPro: IPR003819 This family consists of TauD/TfdA taurine catabolism dioxygenases. The Escherichia coli tauD gene is required for the utilization of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalyzing the oxygenolytic release of sulphite from taurine []. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family []. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3SWT_B 3R1J_A 1GVG_A 1DRT_A 1DS1_A 1DS0_A 1DRY_A 3V15_A 3PVJ_D 3V17_A ....
Probab=26.06 E-value=1.3e+02 Score=24.54 Aligned_cols=35 Identities=17% Similarity=0.417 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHh
Q 025269 33 QVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKF 70 (255)
Q Consensus 33 ~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f 70 (255)
+..++|.+++.+.||+.|.+-.++.+.. .+.++.|
T Consensus 24 ~~~~~~~~~l~~~G~vvlrg~~~~~~~~---~~~~~~~ 58 (258)
T PF02668_consen 24 EELEELREALAEYGFVVLRGFPLDPEQF---EALASRL 58 (258)
T ss_dssp CHHHHHHHHHHHHSEEEEESCTSSHHHH---HHHHHHH
T ss_pred HHHHHHHHHHhcccEEEEcCCCCCHHHH---HHHHHhh
Confidence 4788899999999999999888755433 4455565
No 76
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=25.47 E-value=1.9e+02 Score=24.44 Aligned_cols=37 Identities=19% Similarity=0.234 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhcceEEEEcC-CCChHHHHHHHHHHHH
Q 025269 33 QVVKQLDKACKEAGFFYVKGH-GIPESLINDVKNITQK 69 (255)
Q Consensus 33 ~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~ 69 (255)
+..-...+-|.+.|.-.|++. |.+++.++.+-++++.
T Consensus 80 ~~~~~~l~~~~~~~~~lVIGTTGf~~e~~~~l~~~a~~ 117 (266)
T COG0289 80 EATLENLEFALEHGKPLVIGTTGFTEEQLEKLREAAEK 117 (266)
T ss_pred hhhHHHHHHHHHcCCCeEEECCCCCHHHHHHHHHHHhh
Confidence 446667788888998888874 9999988888777765
No 77
>PRK06208 hypothetical protein; Provisional
Probab=24.58 E-value=72 Score=27.14 Aligned_cols=25 Identities=12% Similarity=0.195 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.++++.+.+++++...+.+.|||+-
T Consensus 177 ~ela~~va~~l~~~~avLL~NHGvv 201 (274)
T PRK06208 177 TSEGRRIAAALGTHKAVILQNHGLL 201 (274)
T ss_pred hHHHHHHHHHhccCCEEEECCCCce
Confidence 5788899999999999999999974
No 78
>cd05797 Ribosomal_L10 Ribosomal protein L10 family, L10 subfamily; composed of bacterial 50S ribosomal protein and eukaryotic mitochondrial 39S ribosomal protein, L10. L10 occupies the L7/L12 stalk of the ribosome. The N-terminal domain (NTD) of L10 interacts with L11 protein and forms the base of the L7/L12 stalk, while the extended C-terminal helix binds to two or three dimers of the NTD of L7/L12 (L7 and L12 are identical except for an acetylated N-terminus). The L7/L12 stalk is known to contain the binding site for elongation factors G and Tu (EF-G and EF-Tu, respectively); however, there is disagreement as to whether or not L10 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, L10 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WASP-in
Probab=24.30 E-value=2.8e+02 Score=21.06 Aligned_cols=40 Identities=18% Similarity=0.300 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHHHHhcceEEEEc-CCCChHHHHHHHHHHHH
Q 025269 30 GVSQVVKQLDKACKEAGFFYVKG-HGIPESLINDVKNITQK 69 (255)
Q Consensus 30 ~~~~~~~~l~~A~~~~Gff~l~n-hgi~~~~~~~~~~~~~~ 69 (255)
.+..+.++|.+.+++.-++++.+ .|++...+..+-...+.
T Consensus 4 ~K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 44 (157)
T cd05797 4 KKEEIVAELKEKLKEAKSVVVADYRGLTVAQLTELRKELRE 44 (157)
T ss_pred HHHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 46778999999999988888775 58888777776665553
No 79
>PRK06661 hypothetical protein; Provisional
Probab=24.29 E-value=71 Score=26.33 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.+.++.+.+++.+...+.+.|||+-
T Consensus 137 ~~~~~~~a~~l~~~~avll~nHG~v 161 (231)
T PRK06661 137 DKQSSRLVNDLKQNYVMLLRNHGAI 161 (231)
T ss_pred hhHHHHHHHHhCCCCEEEECCCCCe
Confidence 4568889999999999999999974
No 80
>PF08699 DUF1785: Domain of unknown function (DUF1785); InterPro: IPR014811 This region is found in argonaute [] proteins and often co-occurs with IPR003103 from INTERPRO and IPR003165 from INTERPRO. ; PDB: 1R6Z_P 3MJ0_A 4EI1_A 4F3T_A 4EI3_A 1R4K_A.
Probab=24.16 E-value=28 Score=21.39 Aligned_cols=24 Identities=17% Similarity=0.069 Sum_probs=20.5
Q ss_pred CceeEEcCCeeecCCCCCceeecC
Q 025269 228 TALEVQFHLLLLVPGLGGSMDFHD 251 (255)
Q Consensus 228 ~GLQv~~~~w~~V~~~~g~l~Vn~ 251 (255)
+|||++.+-...|.|-.+.++||.
T Consensus 19 ~Gle~~rG~~qSvRp~~~~l~lNv 42 (52)
T PF08699_consen 19 GGLEAWRGFFQSVRPTQGGLLLNV 42 (52)
T ss_dssp TTEEEEEEEEEEEEEETTEEEEEE
T ss_pred CcEEEeEeEEeeeEEcCCCCEEEE
Confidence 589999998888888888888885
No 81
>PRK06486 hypothetical protein; Provisional
Probab=23.04 E-value=79 Score=26.65 Aligned_cols=25 Identities=20% Similarity=0.446 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHhcceEEEEcCCCC
Q 025269 32 SQVVKQLDKACKEAGFFYVKGHGIP 56 (255)
Q Consensus 32 ~~~~~~l~~A~~~~Gff~l~nhgi~ 56 (255)
.++++.+.+++++...+.|.|||+-
T Consensus 162 ~ela~~va~al~~~~avLL~nHG~v 186 (262)
T PRK06486 162 AAEGDRIARAMGDADIVFLKNHGVM 186 (262)
T ss_pred hhHHHHHHHHhCcCCEEEECCCCCe
Confidence 5678899999999999999999975
No 82
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=22.73 E-value=1.4e+02 Score=18.51 Aligned_cols=25 Identities=16% Similarity=0.122 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCccccc
Q 025269 151 LCTDLSRKIMRGIALALGGSPFEFE 175 (255)
Q Consensus 151 ~~~~l~~~ll~~i~~~Lgl~~~~l~ 175 (255)
.-.++++.|.++++..||.+++...
T Consensus 16 qK~~l~~~it~~l~~~lg~~~~~v~ 40 (63)
T TIGR00013 16 QKRQLIEGVTEAMAETLGANLESIV 40 (63)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccEE
Confidence 3457888889999999999976544
No 83
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=22.59 E-value=1.2e+02 Score=18.94 Aligned_cols=26 Identities=15% Similarity=0.176 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccc
Q 025269 150 NLCTDLSRKIMRGIALALGGSPFEFE 175 (255)
Q Consensus 150 ~~~~~l~~~ll~~i~~~Lgl~~~~l~ 175 (255)
+.-+++...|.+++++.||.|++.+.
T Consensus 15 eqk~~l~~~it~~l~~~lg~p~~~v~ 40 (64)
T PRK01964 15 EKIKNLIREVTEAISATLDVPKERVR 40 (64)
T ss_pred HHHHHHHHHHHHHHHHHhCcChhhEE
Confidence 34457888888999999999976544
No 84
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=22.22 E-value=1.3e+02 Score=18.53 Aligned_cols=25 Identities=8% Similarity=0.155 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCccccc
Q 025269 151 LCTDLSRKIMRGIALALGGSPFEFE 175 (255)
Q Consensus 151 ~~~~l~~~ll~~i~~~Lgl~~~~l~ 175 (255)
.-++++..|.+.+++.+|.|++...
T Consensus 16 qk~~l~~~it~~l~~~~~~p~~~v~ 40 (61)
T PRK02220 16 QLKALVKDVTAAVSKNTGAPAEHIH 40 (61)
T ss_pred HHHHHHHHHHHHHHHHhCcChhhEE
Confidence 4457888889999999999876544
No 85
>PRK04516 minC septum formation inhibitor; Reviewed
Probab=21.74 E-value=2.7e+02 Score=23.11 Aligned_cols=46 Identities=15% Similarity=0.074 Sum_probs=31.3
Q ss_pred CCCCc-EEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHH
Q 025269 5 FKSIP-IIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLIN 61 (255)
Q Consensus 5 ~~~iP-vIDls~l~~~~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~ 61 (255)
|...| |||++.+.+.. ..-...|.+.|++.|+.-+--.|-..+...
T Consensus 44 f~~aPvVldl~~l~~~~-----------~~dl~~L~~~l~~~gl~~vGv~g~~~~~~~ 90 (235)
T PRK04516 44 SGVVPFVLDVQEFDYPE-----------SLDLAALVSLFSRHGMQILGLKHSNERWAA 90 (235)
T ss_pred CCCCcEEEEchhhCCcc-----------cccHHHHHHHHHHCCCEEEEEeCCCHHHHH
Confidence 56678 58999985311 112566999999999999876666554333
No 86
>PF06708 DUF1195: Protein of unknown function (DUF1195); InterPro: IPR010608 This family consists of several plant specific hypothetical proteins of around 160 residues in length. The function of this family is unknown.
Probab=21.62 E-value=2.1e+02 Score=21.57 Aligned_cols=38 Identities=8% Similarity=0.084 Sum_probs=28.9
Q ss_pred ChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhc
Q 025269 28 DPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFF 71 (255)
Q Consensus 28 ~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 71 (255)
-++|+++++++.+-+...+ ..++| ...+++|+++.+..
T Consensus 87 mEeREKvVr~MWDvYt~s~-----~vrLP-rFWqEAFeAAYe~L 124 (157)
T PF06708_consen 87 MEEREKVVRHMWDVYTRSR-----RVRLP-RFWQEAFEAAYEEL 124 (157)
T ss_pred HHHHHHHHHHHHHHhcCCC-----CccCc-hHHHHHHHHHHHHH
Confidence 3689999999999988766 33444 57888888887764
No 87
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=21.24 E-value=1.5e+02 Score=17.81 Aligned_cols=26 Identities=12% Similarity=0.207 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccc
Q 025269 150 NLCTDLSRKIMRGIALALGGSPFEFE 175 (255)
Q Consensus 150 ~~~~~l~~~ll~~i~~~Lgl~~~~l~ 175 (255)
+.-++++..|.+++++.+|.+++.+.
T Consensus 14 eqk~~l~~~i~~~l~~~~g~~~~~v~ 39 (58)
T cd00491 14 EQKRELIERVTEAVSEILGAPEATIV 39 (58)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcccEE
Confidence 34567888888999999999876543
No 88
>KOG3571 consensus Dishevelled 3 and related proteins [General function prediction only]
Probab=20.99 E-value=33 Score=31.63 Aligned_cols=41 Identities=12% Similarity=0.136 Sum_probs=29.6
Q ss_pred CccccccccccCCeeEEeeCCCCCceeEEcCCeeecCCCCCce
Q 025269 205 NNIGCGAHTDYGLLTLVNQDDDITALEVQFHLLLLVPGLGGSM 247 (255)
Q Consensus 205 ~~~~~~~HtD~~~lTlL~~d~~~~GLQv~~~~w~~V~~~~g~l 247 (255)
+.+.+-.|+|...++--.+- .-.||+|+++-|..++ ||.+|
T Consensus 383 e~~~~~~~~d~~~vvraMa~-pdSGLeirdRmWlKIt-IPnaf 423 (626)
T KOG3571|consen 383 EKIELLTEMDMIIVVRAMAR-PDSGLEIRDRMWLKIT-IPNAF 423 (626)
T ss_pred ccchhcccccHHHHHHhhcC-CCCcceeccceeeeee-cchhh
Confidence 34566778887777766665 5689999999999885 34444
No 89
>PRK00099 rplJ 50S ribosomal protein L10; Reviewed
Probab=20.84 E-value=3.5e+02 Score=20.90 Aligned_cols=41 Identities=15% Similarity=0.248 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHHHHHhcceEEEEc-CCCChHHHHHHHHHHHH
Q 025269 29 PGVSQVVKQLDKACKEAGFFYVKG-HGIPESLINDVKNITQK 69 (255)
Q Consensus 29 ~~~~~~~~~l~~A~~~~Gff~l~n-hgi~~~~~~~~~~~~~~ 69 (255)
+.+....++|.+.+++.-++++.+ .|++...+..+-+..+.
T Consensus 4 ~~K~~~v~~l~~~l~~~~~v~v~~~~gl~~~~~~~lR~~lr~ 45 (172)
T PRK00099 4 EEKKEIVAELAEKLKKAQSAVVADYRGLTVAQMTELRKKLRE 45 (172)
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEecCCCcHHHHHHHHHHHHH
Confidence 356778888999998887777765 48888777666665554
No 90
>PF00356 LacI: Bacterial regulatory proteins, lacI family; InterPro: IPR000843 Numerous bacterial transcription regulatory proteins bind DNA via a helix-turn-helix (HTH) motif. These proteins are very diverse, but for convenience may be grouped into subfamilies on the basis of sequence similarity. One such family groups together a range of proteins, including ascG, ccpA, cytR, ebgR, fruR, galR, galS, lacI, malI, opnR, purF, rafR, rbtR and scrR [, ]. Within this family, the HTH motif is situated towards the N terminus.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 3KJX_C 1ZAY_A 1VPW_A 2PUA_A 1QQA_A 1PNR_A 1JFT_A 1QP4_A 2PUD_A 1JH9_A ....
Probab=20.63 E-value=1e+02 Score=18.32 Aligned_cols=19 Identities=16% Similarity=0.235 Sum_probs=15.6
Q ss_pred hHHHHHHHHHHHHHhcceE
Q 025269 30 GVSQVVKQLDKACKEAGFF 48 (255)
Q Consensus 30 ~~~~~~~~l~~A~~~~Gff 48 (255)
-.++..++|.+++++.||-
T Consensus 26 vs~~tr~rI~~~a~~lgY~ 44 (46)
T PF00356_consen 26 VSEETRERILEAAEELGYR 44 (46)
T ss_dssp STHHHHHHHHHHHHHHTB-
T ss_pred CCHHHHHHHHHHHHHHCCC
Confidence 3478899999999999983
No 91
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=20.59 E-value=1.7e+02 Score=18.56 Aligned_cols=38 Identities=13% Similarity=0.289 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhcc--eEEEEc------CCCChHHHHHHHHHHHH
Q 025269 32 SQVVKQLDKACKEAG--FFYVKG------HGIPESLINDVKNITQK 69 (255)
Q Consensus 32 ~~~~~~l~~A~~~~G--ff~l~n------hgi~~~~~~~~~~~~~~ 69 (255)
.+..+.|.+.++++| .+.++. +||+.+.+..+++..++
T Consensus 23 ~~~l~~la~ia~~yg~~~irlT~~Q~l~l~~v~~~~~~~i~~~L~~ 68 (69)
T PF03460_consen 23 AEQLRALAEIAEKYGDGEIRLTTRQNLQLRGVPEENLPAIFEELKE 68 (69)
T ss_dssp HHHHHHHHHHHHHHSTSEEEEETTSCEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEECCCCeEEEeCCCHHHHHHHHHHHHc
Confidence 356777777777766 777753 57888888887776553
No 92
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=20.57 E-value=48 Score=17.63 Aligned_cols=17 Identities=35% Similarity=0.561 Sum_probs=11.5
Q ss_pred EEEEcCCCChHHHHHHH
Q 025269 48 FYVKGHGIPESLINDVK 64 (255)
Q Consensus 48 f~l~nhgi~~~~~~~~~ 64 (255)
.||..||++.+.+..-+
T Consensus 9 rYV~eh~ls~ee~~~RL 25 (28)
T PF12368_consen 9 RYVKEHGLSEEEVAERL 25 (28)
T ss_pred hhHHhcCCCHHHHHHHH
Confidence 46778888887655433
No 93
>TIGR03677 rpl7ae 50S ribosomal protein L7Ae. Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs. Interacts with protein L15e.
Probab=20.33 E-value=2e+02 Score=20.87 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=25.9
Q ss_pred HHHHHHHHHh---cceEEEEcCCCChHHHHHHHHHHHHh
Q 025269 35 VKQLDKACKE---AGFFYVKGHGIPESLINDVKNITQKF 70 (255)
Q Consensus 35 ~~~l~~A~~~---~Gff~l~nhgi~~~~~~~~~~~~~~f 70 (255)
.++|..||.. ...+.|++.|....+++++....+++
T Consensus 78 k~eLG~a~Gk~~~~svvaI~d~g~a~~~~~~~~~~i~~~ 116 (117)
T TIGR03677 78 KEDLGAAAGLEVGAASAAIVDEGKAEELLKEIIEKVEAL 116 (117)
T ss_pred HHHHHHHhCCCCCeEEEEEEchhhhHHHHHHHHHHHHhc
Confidence 3456677753 56777788888888888887776654
No 94
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=20.25 E-value=1.5e+02 Score=18.25 Aligned_cols=25 Identities=24% Similarity=0.246 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCccccc
Q 025269 151 LCTDLSRKIMRGIALALGGSPFEFE 175 (255)
Q Consensus 151 ~~~~l~~~ll~~i~~~Lgl~~~~l~ 175 (255)
.-.+++..|.+++++.||.+++.+.
T Consensus 16 qk~~l~~~it~~l~~~~~~p~~~v~ 40 (62)
T PRK00745 16 QKRKLVEEITRVTVETLGCPPESVD 40 (62)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHEE
Confidence 4457888899999999999876554
No 95
>PF05338 DUF717: Protein of unknown function (DUF717); InterPro: IPR008002 This entry is represented by the Human herpesvirus 8, Orf30 protein; it is a family of uncharacterised viral proteins.
Probab=20.20 E-value=82 Score=19.69 Aligned_cols=19 Identities=32% Similarity=0.364 Sum_probs=14.0
Q ss_pred HHHHHHHHhcCCCHHHHhc
Q 025269 62 DVKNITQKFFDLPYEEKIK 80 (255)
Q Consensus 62 ~~~~~~~~fF~lp~e~K~~ 80 (255)
+=|..+..||++|.-+-..
T Consensus 5 ~Df~eC~~FF~rPlp~li~ 23 (55)
T PF05338_consen 5 NDFEECLKFFSRPLPELID 23 (55)
T ss_pred HHHHHHHHHHcCcHHHHHH
Confidence 3467789999999866533
Done!