BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025270
(255 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224082634|ref|XP_002306773.1| predicted protein [Populus trichocarpa]
gi|222856222|gb|EEE93769.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/249 (86%), Positives = 225/249 (90%), Gaps = 1/249 (0%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F + N + RPV DWAKS+GVKQFLFISSAGIYKP DEPPHVEGDVVK DAG
Sbjct: 127 ATFDVVLDNNGKDLDTVRPVVDWAKSAGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAG 186
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
HV VEKYI+E FS+WA FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNIAH
Sbjct: 187 HVGVEKYIAEIFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAH 246
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
VRDLSSMLTLAVENPEAAS NIFN VSDRAVTLDGMAKLCAQAAGLPVEI+HYDPKA GI
Sbjct: 247 VRDLSSMLTLAVENPEAASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVEIMHYDPKAVGI 306
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 244
DAKKAFPFRNMHFYAEPRAAKDILGW+ TTNLPEDLKERF+EYVKIGRDKK MQFEIDDK
Sbjct: 307 DAKKAFPFRNMHFYAEPRAAKDILGWQGTTNLPEDLKERFDEYVKIGRDKKPMQFEIDDK 366
Query: 245 ILESLKVPI 253
ILESLKVP+
Sbjct: 367 ILESLKVPV 375
>gi|224066507|ref|XP_002302114.1| predicted protein [Populus trichocarpa]
gi|222843840|gb|EEE81387.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/232 (89%), Positives = 216/232 (93%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
RPV DWAKS+GVKQFLFISSAGIYK DEPPHVEGDVVK DAGHV VEKYI+E FS+WA
Sbjct: 171 RPVVDWAKSAGVKQFLFISSAGIYKATDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAI 230
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNIAH RDLSSMLTLAVENPEA
Sbjct: 231 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHARDLSSMLTLAVENPEA 290
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
AS IFN VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK GIDAKKAFPFRNMHFYAEP
Sbjct: 291 ASGRIFNCVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKVVGIDAKKAFPFRNMHFYAEP 350
Query: 202 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 253
RAAK+ILGW+ TTNLPEDLKERF++YVKIGRDKK MQFEIDDKILESLKVP+
Sbjct: 351 RAAKEILGWQGTTNLPEDLKERFDDYVKIGRDKKPMQFEIDDKILESLKVPV 402
>gi|225436924|ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis
vinifera]
gi|147789789|emb|CAN73874.1| hypothetical protein VITISV_039540 [Vitis vinifera]
Length = 397
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/251 (83%), Positives = 217/251 (86%), Gaps = 1/251 (0%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F + N + RPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGD+VK DAG
Sbjct: 147 AAFDVVLDNNGKDIDTVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDIVKADAG 206
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
HV VE YISE F +WA FRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAH
Sbjct: 207 HVGVETYISEVFGSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTNIAH 266
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
VRDLSSMLTLAVENP AAS NIFN VSDRAVTLDGMAKLCAQAAG PV IVHYDPKA GI
Sbjct: 267 VRDLSSMLTLAVENPAAASGNIFNCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGI 326
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 244
DAKKAFPFRNMHFYAEPRAAKDILGW TNLPEDLKERF+EYVKIGRDKK M+FEIDDK
Sbjct: 327 DAKKAFPFRNMHFYAEPRAAKDILGWHGITNLPEDLKERFDEYVKIGRDKKPMKFEIDDK 386
Query: 245 ILESLKVPIPV 255
ILESLKV + V
Sbjct: 387 ILESLKVSVAV 397
>gi|296086699|emb|CBI32334.3| unnamed protein product [Vitis vinifera]
Length = 284
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/251 (83%), Positives = 217/251 (86%), Gaps = 1/251 (0%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F + N + RPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGD+VK DAG
Sbjct: 34 AAFDVVLDNNGKDIDTVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDIVKADAG 93
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
HV VE YISE F +WA FRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAH
Sbjct: 94 HVGVETYISEVFGSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTNIAH 153
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
VRDLSSMLTLAVENP AAS NIFN VSDRAVTLDGMAKLCAQAAG PV IVHYDPKA GI
Sbjct: 154 VRDLSSMLTLAVENPAAASGNIFNCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGI 213
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 244
DAKKAFPFRNMHFYAEPRAAKDILGW TNLPEDLKERF+EYVKIGRDKK M+FEIDDK
Sbjct: 214 DAKKAFPFRNMHFYAEPRAAKDILGWHGITNLPEDLKERFDEYVKIGRDKKPMKFEIDDK 273
Query: 245 ILESLKVPIPV 255
ILESLKV + V
Sbjct: 274 ILESLKVSVAV 284
>gi|356535978|ref|XP_003536518.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
[Glycine max]
Length = 404
Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/234 (85%), Positives = 214/234 (91%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
RPV DWAKSSGVKQFLFISSAGIYKP DEPPHVEGDVVK DAGHV+VEKYI E + +WA
Sbjct: 171 RPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYIEETYGSWAV 230
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
FRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSG+Q +NIAHVRDLSSMLTLAVENPEA
Sbjct: 231 FRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSMLTLAVENPEA 290
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
A+ IFN VSDRAVTLDG+AKLCAQAAG PV IVHYDPKA G+DAKKAFPFR HFYAEP
Sbjct: 291 ANQTIFNCVSDRAVTLDGIAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRTYHFYAEP 350
Query: 202 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 255
RAAK LGW+STTNLPEDLKERFEEYVKIGRDKK++QFE+DDKILE+LKVP+ V
Sbjct: 351 RAAKAKLGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVSV 404
>gi|32746733|gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]
Length = 405
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/247 (82%), Positives = 218/247 (88%), Gaps = 1/247 (0%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+ N + RPVADWAKSSG KQFLFISSAGIYK DEPPHVEGD VK DAGHV
Sbjct: 157 FDAVLDNNGKDLDAVRPVADWAKSSGAKQFLFISSAGIYKSTDEPPHVEGDAVKADAGHV 216
Query: 67 QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 126
VEKYISE F +WASFRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAHVR
Sbjct: 217 GVEKYISEIFDSWASFRPQYMIGSGNNKDCEEWFFDRIVRGRPVPIPGSGMQLTNIAHVR 276
Query: 127 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA 186
DLSSMLT AV+NP AAS +IFN VSDRAVTLDGMAKLCA+AAG VEIVHYDPKA G+DA
Sbjct: 277 DLSSMLTAAVQNPAAASGHIFNCVSDRAVTLDGMAKLCAKAAGFSVEIVHYDPKAVGVDA 336
Query: 187 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
KKAFPFRNMHFY+EPRAAK+ILGW +TTNLPEDLKERF+EYVKIGRDKK M+FE+DDKIL
Sbjct: 337 KKAFPFRNMHFYSEPRAAKEILGWSATTNLPEDLKERFDEYVKIGRDKKEMKFELDDKIL 396
Query: 247 ESLKVPI 253
E+LKVP+
Sbjct: 397 EALKVPV 403
>gi|356500206|ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
[Glycine max]
Length = 403
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/243 (83%), Positives = 218/243 (89%), Gaps = 2/243 (0%)
Query: 15 NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
NN L+ RPV DWAKSSGVKQFLF+SSAGIYKP DEPPHVEGDVVK DAGHV+VEKYI
Sbjct: 161 NNGKDLETVRPVIDWAKSSGVKQFLFVSSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYI 220
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
E F +WA FRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSG+Q +NIAHVRDLSSML
Sbjct: 221 EETFGSWAVFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSML 280
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
TLAVENPEAA+ IFN VSDRAVTLDG+AKLCAQAAG PV I+HYDPKA G+DAKKAFPF
Sbjct: 281 TLAVENPEAANQTIFNCVSDRAVTLDGIAKLCAQAAGRPVNILHYDPKAVGVDAKKAFPF 340
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
R HFYAEPRAAK LGW+STTNLPEDLKERFEEYVKIGRDKK++QFE+DDKILE+LKVP
Sbjct: 341 RTYHFYAEPRAAKAKLGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVP 400
Query: 253 IPV 255
+ V
Sbjct: 401 VTV 403
>gi|312273915|gb|ADQ57386.1| CSP41A-X protein [Silene latifolia]
Length = 306
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/243 (83%), Positives = 221/243 (90%), Gaps = 2/243 (0%)
Query: 15 NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
NN L+ RPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YI
Sbjct: 64 NNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYI 123
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
S+ FS+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSML
Sbjct: 124 SQTFSSWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSML 183
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
TLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPF
Sbjct: 184 TLAVENPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPF 243
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
RNMHFYAEPRAAK+ILGW+S+T LP+DLKER+EEYVKIGRDKK ++FE+DDKILE+LK P
Sbjct: 244 RNMHFYAEPRAAKEILGWKSSTYLPDDLKERYEEYVKIGRDKKDIKFELDDKILEALKAP 303
Query: 253 IPV 255
V
Sbjct: 304 AAV 306
>gi|255647134|gb|ACU24035.1| unknown [Glycine max]
Length = 403
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/243 (82%), Positives = 217/243 (89%), Gaps = 2/243 (0%)
Query: 15 NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
NN L+ RPV DWAKSSGVKQFLF+SSAGIYKP DEPPHVEGDVVK DAGHV+VEKYI
Sbjct: 161 NNGKGLETVRPVIDWAKSSGVKQFLFVSSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYI 220
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
E F +WA FRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSG+Q +NIAHVRDLSSML
Sbjct: 221 EETFGSWAVFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSML 280
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
TLAV NPEAA+ IFN VSDRAVTLDG+AKLCAQAAG PV I+HYDPKA G+DAKKAFPF
Sbjct: 281 TLAVGNPEAANQTIFNCVSDRAVTLDGIAKLCAQAAGRPVNILHYDPKAVGVDAKKAFPF 340
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
R HFYAEPRAAK LGW+STTNLPEDLKERFEEYVKIGRDKK++QFE+DDKILE+LKVP
Sbjct: 341 RTYHFYAEPRAAKAKLGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVP 400
Query: 253 IPV 255
+ V
Sbjct: 401 VTV 403
>gi|343172519|gb|AEL98963.1| chloroplast stem-loop binding protein, partial [Silene latifolia]
Length = 384
Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/240 (83%), Positives = 220/240 (91%), Gaps = 2/240 (0%)
Query: 15 NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
NN L+ RPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YI
Sbjct: 143 NNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYI 202
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
S+ FS+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSML
Sbjct: 203 SQTFSSWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSML 262
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
TLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPF
Sbjct: 263 TLAVENPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPF 322
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
RNMHFYAEPRAAK+ILGW+++T LP+DLKER+EEYVKIGRDKK ++FE+DDKILE+LK P
Sbjct: 323 RNMHFYAEPRAAKEILGWKASTYLPDDLKERYEEYVKIGRDKKDIKFELDDKILEALKAP 382
>gi|343172517|gb|AEL98962.1| chloroplast stem-loop binding protein, partial [Silene latifolia]
Length = 384
Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/240 (83%), Positives = 220/240 (91%), Gaps = 2/240 (0%)
Query: 15 NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
NN L+ RPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YI
Sbjct: 143 NNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYI 202
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
S+ FS+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSML
Sbjct: 203 SQTFSSWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSML 262
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
TLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPF
Sbjct: 263 TLAVENPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPF 322
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
RNMHFYAEPRAAK+ILGW+++T LP+DLKER+EEYVKIGRDKK ++FE+DDKILE+LK P
Sbjct: 323 RNMHFYAEPRAAKEILGWKASTYLPDDLKERYEEYVKIGRDKKDIKFELDDKILEALKAP 382
>gi|312273917|gb|ADQ57387.1| CSP41A-Y protein [Silene latifolia]
Length = 306
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/243 (82%), Positives = 220/243 (90%), Gaps = 2/243 (0%)
Query: 15 NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
NN L+ RPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YI
Sbjct: 64 NNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYI 123
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
S+ FS+WASFRPQYM GSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSML
Sbjct: 124 SQTFSSWASFRPQYMTGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSML 183
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
TLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPF
Sbjct: 184 TLAVENPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPF 243
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
RNMHFYAEPRAAK+ILGW+S+T LP+DLKER+EEYVKIGRDKK ++FE+DDKIL++LK P
Sbjct: 244 RNMHFYAEPRAAKEILGWKSSTYLPDDLKERYEEYVKIGRDKKDIKFELDDKILDALKAP 303
Query: 253 IPV 255
V
Sbjct: 304 AAV 306
>gi|350534514|ref|NP_001234656.1| mRNA binding protein precursor [Solanum lycopersicum]
gi|26453355|gb|AAD21574.3| mRNA binding protein precursor [Solanum lycopersicum]
Length = 407
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/231 (86%), Positives = 211/231 (91%)
Query: 23 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
PVADWAKSSGVKQFLFISSAGIYKP DEPPHVEGD VK DAGHV VEKYISE F +WASF
Sbjct: 175 PVADWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDAVKADAGHVLVEKYISEIFGSWASF 234
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
RPQYMIGSGNNKDCEEWFFDRIVR RPV IPGSGMQ TNI+HVRDLSSMLTLAV+NP AA
Sbjct: 235 RPQYMIGSGNNKDCEEWFFDRIVRGRPVLIPGSGMQLTNISHVRDLSSMLTLAVQNPAAA 294
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 202
S IFN VSDRAVTLDGMA+LCA+AAG VEIVHYDPKA G+DAKKAFPFRNMHFYAEPR
Sbjct: 295 SGRIFNCVSDRAVTLDGMARLCAKAAGSSVEIVHYDPKAVGVDAKKAFPFRNMHFYAEPR 354
Query: 203 AAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 253
A +ILGW +TTNLPEDLKER+EEYVKIGRDKK M+FE+DDKILESLKVP+
Sbjct: 355 APNEILGWSATTNLPEDLKERYEEYVKIGRDKKEMKFELDDKILESLKVPV 405
>gi|449444637|ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Cucumis sativus]
Length = 409
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/249 (81%), Positives = 216/249 (86%), Gaps = 1/249 (0%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F + N + RPV DWAKSSGVKQFLFISSAGIYK DEPPHVEGD VK DAG
Sbjct: 159 ASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAG 218
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
HV VEKYI+E FS+WA FRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNIAH
Sbjct: 219 HVGVEKYIAEVFSSWAVFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAH 278
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
VRDLSSMLTLAVE P+ A SNIFN VS RAVTLDGMAKLCAQAAG PV IVHYDPKA G+
Sbjct: 279 VRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGV 338
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 244
DAKKAFPFRNMHFYAEPRAA++ILGW TTNLPEDLKERFEEYVKIGRDKKA++FE+DDK
Sbjct: 339 DAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDLKERFEEYVKIGRDKKAIKFELDDK 398
Query: 245 ILESLKVPI 253
ILESL VP+
Sbjct: 399 ILESLNVPV 407
>gi|312273913|gb|ADQ57385.1| CSP41A protein [Silene vulgaris]
Length = 306
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/243 (81%), Positives = 221/243 (90%), Gaps = 2/243 (0%)
Query: 15 NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
NN L+ RPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YI
Sbjct: 64 NNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYI 123
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
S+ FS+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSML
Sbjct: 124 SQTFSSWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSML 183
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
TLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPF
Sbjct: 184 TLAVENPTSASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPF 243
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
RNMHFYAEPRAAK+ILGW+++T LP+DLKER++EYVKIGRDKK ++FE+DDKIL++LK P
Sbjct: 244 RNMHFYAEPRAAKEILGWKASTYLPDDLKERYDEYVKIGRDKKDIKFELDDKILDALKAP 303
Query: 253 IPV 255
V
Sbjct: 304 AAV 306
>gi|449532425|ref|XP_004173181.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like, partial [Cucumis sativus]
Length = 274
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/249 (81%), Positives = 216/249 (86%), Gaps = 1/249 (0%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F + N + RPV DWAKSSGVKQFLFISSAGIYK DEPPHVEGD VK DAG
Sbjct: 24 ASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAG 83
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
HV VEKYI+E FS+WA FRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNIAH
Sbjct: 84 HVGVEKYIAEVFSSWAVFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAH 143
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
VRDLSSMLTLAVE P+ A SNIFN VS RAVTLDGMAKLCAQAAG PV IVHYDPKA G+
Sbjct: 144 VRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGV 203
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 244
DAKKAFPFRNMHFYAEPRAA++ILGW TTNLPEDLKERFEEYVKIGRDKKA++FE+DDK
Sbjct: 204 DAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDLKERFEEYVKIGRDKKAIKFELDDK 263
Query: 245 ILESLKVPI 253
ILESL VP+
Sbjct: 264 ILESLNVPV 272
>gi|297821230|ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
lyrata]
gi|297324336|gb|EFH54757.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
lyrata]
Length = 408
Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/232 (84%), Positives = 209/232 (90%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
RPV DWAKSSGVKQFLFISSAGIYK ++PPHVEGD VK DAGHV VEKY++E F NWAS
Sbjct: 175 RPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVAVEKYLAETFGNWAS 234
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
FRPQYMIGSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NP+A
Sbjct: 235 FRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVTNPKA 294
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
AS NIFN VSDRAVTLDGMAKLCA AAG VEIVHYDPKA G+DAKKAFPFRNMHFYAEP
Sbjct: 295 ASGNIFNCVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFPFRNMHFYAEP 354
Query: 202 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 253
RAAK+ILGW S TNLPEDLKERFEEYVKIGRDKK ++FE+DDKILE+LK P+
Sbjct: 355 RAAKEILGWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPV 406
>gi|15229384|ref|NP_191873.1| chloroplast stem-loop binding protein-41 [Arabidopsis thaliana]
gi|75311698|sp|Q9LYA9.1|CP41A_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic; Short=CSP41-a; Flags: Precursor
gi|16226201|gb|AAL16101.1|AF428269_1 AT3g63140/T20O10_240 [Arabidopsis thaliana]
gi|7573443|emb|CAB87759.1| mRNA binding protein precursor-like [Arabidopsis thaliana]
gi|16649035|gb|AAL24369.1| mRNA binding protein precursor-like [Arabidopsis thaliana]
gi|22136252|gb|AAM91204.1| mRNA binding protein precursor-like [Arabidopsis thaliana]
gi|332646919|gb|AEE80440.1| chloroplast stem-loop binding protein-41 [Arabidopsis thaliana]
Length = 406
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/232 (84%), Positives = 208/232 (89%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
RPV DWAKSSGVKQFLFISSAGIYK ++PPHVEGD VK DAGHV VEKY++E F NWAS
Sbjct: 173 RPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWAS 232
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
FRPQYMIGSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NPEA
Sbjct: 233 FRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEA 292
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
AS NIFN VSDRAVTLDGMAKLCA AAG VEIVHYDPKA G+DAKKAF FRNMHFYAEP
Sbjct: 293 ASGNIFNCVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEP 352
Query: 202 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 253
RAAKD+LGW S TNLPEDLKERFEEYVKIGRDKK ++FE+DDKILE+LK P+
Sbjct: 353 RAAKDLLGWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPV 404
>gi|357440745|ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula]
gi|355479698|gb|AES60901.1| MRNA-binding protein [Medicago truncatula]
Length = 419
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/243 (80%), Positives = 213/243 (87%), Gaps = 2/243 (0%)
Query: 15 NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
NN L+ RPV DWAKS+G KQFLFISSAGIYK DEPPHVEGD VK DAGHV VEKYI
Sbjct: 177 NNGKDLESVRPVIDWAKSAGAKQFLFISSAGIYKTTDEPPHVEGDAVKADAGHVGVEKYI 236
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
E F +WA FRPQYM GSGNNKDCEEWFFDRIVR RPV IPGSG+Q TNI+HV+DLSSML
Sbjct: 237 EETFDSWAVFRPQYMTGSGNNKDCEEWFFDRIVRDRPVLIPGSGLQLTNISHVKDLSSML 296
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
TLAVENP+AA+ +IFN VSDRAVTL+G+AKLCAQAAG PV IVHYDPKA GIDAKKAFPF
Sbjct: 297 TLAVENPDAANHSIFNCVSDRAVTLNGIAKLCAQAAGRPVNIVHYDPKAIGIDAKKAFPF 356
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
RN+HFYAEPRAAK LGW STTNLPEDLKERFEEY+KIGRDKK ++FE+DDKILE+LKVP
Sbjct: 357 RNVHFYAEPRAAKTKLGWSSTTNLPEDLKERFEEYIKIGRDKKPIKFELDDKILEALKVP 416
Query: 253 IPV 255
+ V
Sbjct: 417 VSV 419
>gi|357440743|ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
gi|355479697|gb|AES60900.1| MRNA-binding protein [Medicago truncatula]
Length = 401
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/243 (80%), Positives = 213/243 (87%), Gaps = 2/243 (0%)
Query: 15 NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
NN L+ RPV DWAKS+G KQFLFISSAGIYK DEPPHVEGD VK DAGHV VEKYI
Sbjct: 159 NNGKDLESVRPVIDWAKSAGAKQFLFISSAGIYKTTDEPPHVEGDAVKADAGHVGVEKYI 218
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
E F +WA FRPQYM GSGNNKDCEEWFFDRIVR RPV IPGSG+Q TNI+HV+DLSSML
Sbjct: 219 EETFDSWAVFRPQYMTGSGNNKDCEEWFFDRIVRDRPVLIPGSGLQLTNISHVKDLSSML 278
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
TLAVENP+AA+ +IFN VSDRAVTL+G+AKLCAQAAG PV IVHYDPKA GIDAKKAFPF
Sbjct: 279 TLAVENPDAANHSIFNCVSDRAVTLNGIAKLCAQAAGRPVNIVHYDPKAIGIDAKKAFPF 338
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
RN+HFYAEPRAAK LGW STTNLPEDLKERFEEY+KIGRDKK ++FE+DDKILE+LKVP
Sbjct: 339 RNVHFYAEPRAAKTKLGWSSTTNLPEDLKERFEEYIKIGRDKKPIKFELDDKILEALKVP 398
Query: 253 IPV 255
+ V
Sbjct: 399 VSV 401
>gi|1532135|gb|AAC49424.1| chloroplast mRNA-binding protein CSP41 precursor, partial [Spinacia
oleracea]
Length = 415
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/231 (79%), Positives = 206/231 (89%)
Query: 23 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
PV DWAKSSG +QFL+ISSAGIY DEPPH+EGD VK A HV VE YI++ F +WA F
Sbjct: 184 PVVDWAKSSGAEQFLYISSAGIYNSTDEPPHIEGDAVKSSASHVAVEDYIAKTFGSWAVF 243
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
RPQYMIGSGNNKDCEEWFFDRIVR RPV IPGSGMQ TNI+HV+DLSSMLT+AVENP AA
Sbjct: 244 RPQYMIGSGNNKDCEEWFFDRIVRDRPVLIPGSGMQLTNISHVKDLSSMLTVAVENPSAA 303
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 202
S NIFN VSDRAVTLDGMAKLCA+AAGLPV+I+HY+PKA G+DAKKAFPFRNMHFYAEPR
Sbjct: 304 SGNIFNCVSDRAVTLDGMAKLCAKAAGLPVKILHYEPKAVGVDAKKAFPFRNMHFYAEPR 363
Query: 203 AAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 253
AA+DILGW++TT LPEDLKER+EEYVKIGRDKK ++FEIDDKILE+L V +
Sbjct: 364 AAQDILGWKATTYLPEDLKERYEEYVKIGRDKKDIKFEIDDKILEALNVSV 414
>gi|357111159|ref|XP_003557382.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like
[Brachypodium distachyon]
Length = 394
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/252 (73%), Positives = 207/252 (82%), Gaps = 2/252 (0%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F + N + +PVADWAKS+GV QFLFISSAGIY P DEPPHVEGD VK AG
Sbjct: 141 ASFDVVLDNNGKDLDAVKPVADWAKSAGVGQFLFISSAGIYTPTDEPPHVEGDAVKGSAG 200
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
HV VEKYI+ F +WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNI+H
Sbjct: 201 HVGVEKYIAAEFGSWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNISH 260
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
RDL SMLT+AVE+P+AA+ IFN VSDRAVTLDG+AK+CA AAG VEIVHYDP AAG+
Sbjct: 261 ARDLGSMLTMAVESPDAAAGKIFNCVSDRAVTLDGLAKMCAAAAGAAVEIVHYDPAAAGV 320
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 244
DAKKAFPFRNMHFYAEPRAAK++LGW STTNLPEDLKERF EY GR KAM F++DDK
Sbjct: 321 DAKKAFPFRNMHFYAEPRAAKEVLGWTSTTNLPEDLKERFAEYASSGRGDKAMSFDLDDK 380
Query: 245 ILESL-KVPIPV 255
IL ++ P+ V
Sbjct: 381 ILSAVGAAPVSV 392
>gi|255559448|ref|XP_002520744.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
gi|223540129|gb|EEF41706.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
Length = 398
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/222 (82%), Positives = 194/222 (87%), Gaps = 1/222 (0%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F + N + RPVADWAKS+G KQFL+ISSAGIY P DEPPHVEGD VK A
Sbjct: 154 ATFDVVLDNNGKDLDTVRPVADWAKSAGAKQFLYISSAGIYVPTDEPPHVEGDAVKSSAS 213
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
HV VEKYI+E FS+WA FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNI+H
Sbjct: 214 HVAVEKYIAEVFSSWAVFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNISH 273
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
VRDLSSMLT +VENPEAA NIFN VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA GI
Sbjct: 274 VRDLSSMLTKSVENPEAAGGNIFNCVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAVGI 333
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 226
DAKKAFPFRNMHFYAEPRAAKDILGW+STTNLPEDLKERF+E
Sbjct: 334 DAKKAFPFRNMHFYAEPRAAKDILGWQSTTNLPEDLKERFDE 375
>gi|326523629|dbj|BAJ92985.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 400
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/235 (76%), Positives = 199/235 (84%), Gaps = 1/235 (0%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+PVADWAK++GV QFLFISSAGIY DEPPHVEGD VK AGHV VEKYI+ F +WAS
Sbjct: 164 KPVADWAKAAGVGQFLFISSAGIYLQTDEPPHVEGDAVKESAGHVGVEKYIAAEFGSWAS 223
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
FRPQYM GSGNNKDCEEWFFDR+VRKRPVPIPGSGMQ TNI+H RDL SMLTLAVENP+A
Sbjct: 224 FRPQYMTGSGNNKDCEEWFFDRVVRKRPVPIPGSGMQLTNISHARDLGSMLTLAVENPDA 283
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
A+ IFN VSDR VTLDG+AK+CA AAG VEIVHYDP A G+DAKKAFPFRNMHFYAEP
Sbjct: 284 AAGKIFNCVSDRGVTLDGLAKMCAAAAGATVEIVHYDPAAVGVDAKKAFPFRNMHFYAEP 343
Query: 202 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL-KVPIPV 255
RAAK++LGW STTNLPEDLKERF EY GR +KAM F++DDKIL ++ P+ V
Sbjct: 344 RAAKEVLGWTSTTNLPEDLKERFAEYASSGRGEKAMTFDLDDKILAAVGAAPVSV 398
>gi|115471157|ref|NP_001059177.1| Os07g0212200 [Oryza sativa Japonica Group]
gi|34393296|dbj|BAC83225.1| putative mRNA binding protein precursor [Oryza sativa Japonica
Group]
gi|50508903|dbj|BAD31699.1| putative mRNA binding protein precursor [Oryza sativa Japonica
Group]
gi|113610713|dbj|BAF21091.1| Os07g0212200 [Oryza sativa Japonica Group]
gi|218199302|gb|EEC81729.1| hypothetical protein OsI_25360 [Oryza sativa Indica Group]
gi|222636664|gb|EEE66796.1| hypothetical protein OsJ_23541 [Oryza sativa Japonica Group]
Length = 392
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 173/244 (70%), Positives = 200/244 (81%), Gaps = 1/244 (0%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F + N + +PV DWAK++GV QFLF+SSAGIY P+DEPPHVEGD VK AG
Sbjct: 148 ASFDVVLDNNGKDLDAVKPVVDWAKAAGVAQFLFVSSAGIYTPSDEPPHVEGDAVKESAG 207
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
HV VEKYI+E F +WASFRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNI+H
Sbjct: 208 HVGVEKYIAEQFGSWASFRPQYMIGSGNNKDCEEWFFDRIVRGRPVPIPGSGMQVTNISH 267
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
VRDL+SM+ LAVE+P AA+ IFN VSDRAVT +G+ K+CA AAG EI+HYDP A G+
Sbjct: 268 VRDLASMVALAVESPGAAAGRIFNCVSDRAVTFNGLVKMCAAAAGAQPEILHYDPAAVGV 327
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 244
DAKKAFPFRNMHFYAEPRAAK++LGWRS+TNLPEDLKERF EY GR +K M F++DDK
Sbjct: 328 DAKKAFPFRNMHFYAEPRAAKEVLGWRSSTNLPEDLKERFAEYASSGRGQKEMSFDLDDK 387
Query: 245 ILES 248
I+ +
Sbjct: 388 IIAA 391
>gi|148906434|gb|ABR16370.1| unknown [Picea sitchensis]
Length = 423
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/256 (71%), Positives = 206/256 (80%), Gaps = 4/256 (1%)
Query: 3 FNYAKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP 61
F F A+ N + +PVADWAK+ G QFL+ISSAGIYKP DEPPHVEGD+VK
Sbjct: 165 FESTMFDAVLDNNGKDLDSVKPVADWAKTIGANQFLYISSAGIYKPTDEPPHVEGDIVKA 224
Query: 62 DAGHVQVEKYI-SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
DA HV VE Y+ S +F++W +FRPQYMIGSGNNKDCEEWFFDRIVR +PVPIPGSGMQ T
Sbjct: 225 DASHVAVEDYLRSLSFNSWCTFRPQYMIGSGNNKDCEEWFFDRIVRDKPVPIPGSGMQVT 284
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDP 179
NIAHVRD+SSML LAVE P AA+ N+FN V DRAVT DG+ KLCA+AAG IVHYDP
Sbjct: 285 NIAHVRDVSSMLVLAVEKPTAANGNVFNAVCDRAVTFDGLTKLCAKAAGRETAAIVHYDP 344
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQF 239
K+ GIDAKKAFPFRNMHFYAEPRAAK+IL WRSTTNLP+DLKERFEEYV GRDKK ++F
Sbjct: 345 KSLGIDAKKAFPFRNMHFYAEPRAAKEILAWRSTTNLPQDLKERFEEYVASGRDKKDIKF 404
Query: 240 EIDDK-ILESLKVPIP 254
E+DDK ILES + P
Sbjct: 405 ELDDKIILESSRAAEP 420
>gi|242043354|ref|XP_002459548.1| hypothetical protein SORBIDRAFT_02g006430 [Sorghum bicolor]
gi|241922925|gb|EER96069.1| hypothetical protein SORBIDRAFT_02g006430 [Sorghum bicolor]
Length = 407
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/252 (72%), Positives = 200/252 (79%), Gaps = 3/252 (1%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F + N + +PVADWAKS+GV QFLFISSAGIYKP +EPPHVEGD VK AG
Sbjct: 151 ASFDVVLDNNGKDLDAVKPVADWAKSAGVGQFLFISSAGIYKPTEEPPHVEGDAVKESAG 210
Query: 65 HVQVEKYISENF-SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
HV VEKYI+E F S+WASFRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPG+GMQ TNIA
Sbjct: 211 HVAVEKYIAEQFGSSWASFRPQYMIGSGNNKDCEEWFFDRIVRNRPVPIPGNGMQLTNIA 270
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC-AQAAGLPVEIVHYDPKAA 182
HVRDLS ML+LAVE P AAS IFN VSDRAVTL GMAKLC A A VEIV YDP AA
Sbjct: 271 HVRDLSRMLSLAVEKPGAASGKIFNCVSDRAVTLSGMAKLCAAAAGADAVEIVLYDPAAA 330
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEID 242
G+DAKKAFPFRNMHFYAEPRAAK LGW S+TNLPEDLKER+ EY GR +K M F++D
Sbjct: 331 GVDAKKAFPFRNMHFYAEPRAAKAALGWTSSTNLPEDLKERYAEYAASGRGEKPMNFDLD 390
Query: 243 DKILESLKVPIP 254
DKIL ++ P
Sbjct: 391 DKILAAVGKAAP 402
>gi|168020071|ref|XP_001762567.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686300|gb|EDQ72690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 412
Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 172/250 (68%), Positives = 196/250 (78%), Gaps = 2/250 (0%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F + N + +PVADWAK++G KQFLFISSAGIYK E PHVEGD VK DAG
Sbjct: 160 ASFDVVLDNNGKTLDVVQPVADWAKANGAKQFLFISSAGIYKSTFEQPHVEGDAVKEDAG 219
Query: 65 HVQVEKYISE-NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
H QVE Y++E +WASFRPQYM G GNNKDCEEWFFDRI R RPVPIP G+Q TNI+
Sbjct: 220 HKQVENYLAELGLESWASFRPQYMTGDGNNKDCEEWFFDRIARGRPVPIPSPGIQVTNIS 279
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 183
HVRDLSSMLTLAV PEAA+ +IFN VSDR T DG+ K+CA+AAG +IVHYDPKA G
Sbjct: 280 HVRDLSSMLTLAVGKPEAANGSIFNCVSDRGTTFDGLVKMCAKAAGKEAKIVHYDPKAIG 339
Query: 184 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDD 243
+DAKKAFPFRNMHFYAEPRAAK LGW S TNL EDLK R+E+YVKIGRDKK ++FE+DD
Sbjct: 340 VDAKKAFPFRNMHFYAEPRAAKTKLGWESKTNLAEDLKARWEDYVKIGRDKKDIKFELDD 399
Query: 244 KILESLKVPI 253
KILE + P+
Sbjct: 400 KILEVVSEPV 409
>gi|414884012|tpg|DAA60026.1| TPA: hypothetical protein ZEAMMB73_761585 [Zea mays]
Length = 403
Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 179/254 (70%), Positives = 200/254 (78%), Gaps = 4/254 (1%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F + N + +PVADWAK++GV QFLFISSAGIYKP +EPPHVEGD VK AG
Sbjct: 148 ASFDVVLDNNGKDLDAVKPVADWAKTAGVGQFLFISSAGIYKPTEEPPHVEGDAVKESAG 207
Query: 65 HVQVEKYISENF-SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
HV VEKYI+E F S WASFRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPG+GMQ TN+A
Sbjct: 208 HVGVEKYIAEQFGSCWASFRPQYMIGSGNNKDCEEWFFDRIVRNRPVPIPGNGMQLTNVA 267
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC-AQAAGLPVEIVHYDPKAA 182
HVRDLSSML+LAVE P AA+ +FN VSDRAVTL GMAKLC A A V+IV YDP A
Sbjct: 268 HVRDLSSMLSLAVEKPGAAAGRVFNCVSDRAVTLAGMAKLCAAAAGADAVDIVLYDPAAV 327
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEID 242
G+DAKKAFPFRNMHFY+EPRAAK+ LGW STTNLPEDLKER+ EY GR K M F++D
Sbjct: 328 GVDAKKAFPFRNMHFYSEPRAAKEALGWTSTTNLPEDLKERYAEYAASGRGDKPMAFDLD 387
Query: 243 DKILESL-KVPIPV 255
D IL ++ K P V
Sbjct: 388 DVILAAVGKAPASV 401
>gi|302819110|ref|XP_002991226.1| hypothetical protein SELMODRAFT_448337 [Selaginella moellendorffii]
gi|300140937|gb|EFJ07654.1| hypothetical protein SELMODRAFT_448337 [Selaginella moellendorffii]
Length = 401
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/244 (70%), Positives = 197/244 (80%), Gaps = 2/244 (0%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+ N + +PV DWAKS GV+QFLFISSAGIYK +DEPPHVEGD VK DAGHV
Sbjct: 157 FHAVLDNNGKDLDAVKPVVDWAKSQGVEQFLFISSAGIYKTSDEPPHVEGDPVKVDAGHV 216
Query: 67 QVEKYISEN-FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV 125
VE YIS++ F W+SFRPQYM GSGNNKDCEEWFFDRIVR +PVPIP G+Q TNIAHV
Sbjct: 217 GVEDYISKSAFKFWSSFRPQYMTGSGNNKDCEEWFFDRIVRDKPVPIPSPGIQVTNIAHV 276
Query: 126 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 185
DLSSM+TLA+ P A+++ IFN VSDRAVT DG+ +LCA+AA +IVHYD KA GID
Sbjct: 277 SDLSSMITLAIGKPSASNATIFNAVSDRAVTFDGLVRLCARAAAKEAKIVHYDAKALGID 336
Query: 186 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKI 245
AKKAFPFRNMHFYAEPRAAK+ LGW S+TNL E LKER+EEY+KIGRDKK ++FEIDD I
Sbjct: 337 AKKAFPFRNMHFYAEPRAAKEKLGWTSSTNLSEALKERYEEYIKIGRDKKDIKFEIDDTI 396
Query: 246 LESL 249
L +
Sbjct: 397 LSKV 400
>gi|302818999|ref|XP_002991171.1| hypothetical protein SELMODRAFT_185868 [Selaginella moellendorffii]
gi|300140999|gb|EFJ07715.1| hypothetical protein SELMODRAFT_185868 [Selaginella moellendorffii]
Length = 401
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/244 (69%), Positives = 196/244 (80%), Gaps = 2/244 (0%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+ N + +PV DWAKS GV+QFLFISSAGIYK +DEPPHVEGD VK DAGHV
Sbjct: 157 FHAVLDNNGKDLDAVKPVVDWAKSQGVEQFLFISSAGIYKTSDEPPHVEGDPVKVDAGHV 216
Query: 67 QVEKYISEN-FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV 125
VE YIS++ F W+SFRPQYM GSGNNKDCEEWFFDRIVR +PVPIP G+Q TNIAHV
Sbjct: 217 GVEDYISKSAFKFWSSFRPQYMTGSGNNKDCEEWFFDRIVRDKPVPIPSPGIQVTNIAHV 276
Query: 126 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 185
DLSSM+TLA+ P A+++ IFN VSD AVT DG+ +LCA+AA +IVHYD KA GID
Sbjct: 277 SDLSSMITLAIGKPSASNATIFNAVSDHAVTFDGLVRLCARAAAKEAKIVHYDAKALGID 336
Query: 186 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKI 245
A+KAFPFRNMHFYAEPRAAK+ LGW S+TNL E LKER+EEY+KIGRDKK ++FEIDD I
Sbjct: 337 ARKAFPFRNMHFYAEPRAAKEKLGWTSSTNLSEALKERYEEYIKIGRDKKDIKFEIDDTI 396
Query: 246 LESL 249
L +
Sbjct: 397 LSKV 400
>gi|302819120|ref|XP_002991231.1| hypothetical protein SELMODRAFT_133157 [Selaginella moellendorffii]
gi|300140942|gb|EFJ07659.1| hypothetical protein SELMODRAFT_133157 [Selaginella moellendorffii]
Length = 401
Score = 345 bits (886), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 166/244 (68%), Positives = 193/244 (79%), Gaps = 2/244 (0%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+ N + +PV DWAKS GV+QFLFISSAGIYK +DEPPH+EGD VK DAGHV
Sbjct: 157 FHAVLDNNGKDLDAVKPVVDWAKSQGVEQFLFISSAGIYKTSDEPPHLEGDPVKADAGHV 216
Query: 67 QVEKYISE-NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV 125
VE YIS+ F +SFRPQYM GSGNNKDCEEWFFDRIVR +PVPIP G++ TNIAHV
Sbjct: 217 GVEDYISKLAFKFCSSFRPQYMTGSGNNKDCEEWFFDRIVRDKPVPIPSPGIRVTNIAHV 276
Query: 126 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 185
DLSSM+TLA+ P A+++ IFN VSD AVT DG+ +LCA+AA +IVHYD KA GID
Sbjct: 277 SDLSSMITLAIGKPSASNATIFNAVSDHAVTFDGLVRLCARAAAKEAKIVHYDAKALGID 336
Query: 186 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKI 245
AKKAFPFRNMHFYAEPRAAK+ LGW S+ NL E LKER+EEY+KIGRDKK ++FEIDD I
Sbjct: 337 AKKAFPFRNMHFYAEPRAAKEKLGWTSSINLSEALKERYEEYIKIGRDKKDIKFEIDDTI 396
Query: 246 LESL 249
L +
Sbjct: 397 LSKV 400
>gi|117607073|gb|ABK42080.1| mRNA-binding protein [Capsicum annuum]
Length = 169
Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/167 (86%), Positives = 155/167 (92%)
Query: 87 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 146
MIGSGNNKDCEEWFFDRIVR RPV IPGSGM TNIAHVRDLSSMLTLAV+NP AAS +I
Sbjct: 1 MIGSGNNKDCEEWFFDRIVRGRPVLIPGSGMHLTNIAHVRDLSSMLTLAVQNPAAASGHI 60
Query: 147 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
FN VSDRAVTLDGMA+LCA+AAG VEIVHYDPKA G+DAKKAFPFRNMHFYAEPRAAK+
Sbjct: 61 FNCVSDRAVTLDGMARLCAKAAGTSVEIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAKE 120
Query: 207 ILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 253
ILGW +TTNLPEDLKERFEEYVKIGRDKK M+FE+DDKILESLKVP+
Sbjct: 121 ILGWSATTNLPEDLKERFEEYVKIGRDKKEMKFELDDKILESLKVPV 167
>gi|255078270|ref|XP_002502715.1| predicted protein [Micromonas sp. RCC299]
gi|226517980|gb|ACO63973.1| predicted protein [Micromonas sp. RCC299]
Length = 371
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/230 (56%), Positives = 166/230 (72%), Gaps = 3/230 (1%)
Query: 23 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
PVA +AK G KQFLF+SSAG+YKP PPH+EGD VK AGH QVE ++ ++ASF
Sbjct: 143 PVAAFAKQCGAKQFLFVSSAGMYKPTPTPPHLEGDAVKESAGHAQVEAKLATMPFSFASF 202
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
RPQY G GNNKDCEE+FFDR+VR RPV +PGSG Q + +AH D+++M+ AV NP AA
Sbjct: 203 RPQYFTGYGNNKDCEEYFFDRLVRGRPVLVPGSGDQLSVVAHAEDVATMMAAAVGNP-AA 261
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA--AGIDAKKAFPFRNMHFYAE 200
+ IFN V+++AVTL+GM +LCA AAG+ +IV+YDPK G++ KKAFPFR +HFY+
Sbjct: 262 NGVIFNAVTNKAVTLNGMVQLCAAAAGVEPKIVNYDPKKLPEGVEVKKAFPFRPIHFYSY 321
Query: 201 PRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLK 250
P A +L W+ +L DLKERFE Y GR K M FE+DDKIL SL+
Sbjct: 322 PANALKLLDWQPKHDLAADLKERFEFYKASGRANKDMSFELDDKILASLR 371
>gi|308811849|ref|XP_003083232.1| PREDICTED OJ1664_D08.105 gene product (ISS) [Ostreococcus tauri]
gi|116055111|emb|CAL57507.1| PREDICTED OJ1664_D08.105 gene product (ISS) [Ostreococcus tauri]
Length = 358
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/247 (51%), Positives = 166/247 (67%), Gaps = 4/247 (1%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
AKF + N + PVAD+A ++G QFLF+SSAGIYKP PPHVEGD VK AG
Sbjct: 111 AKFDVVVDNNGKDMDTVGPVADFAVAAGASQFLFVSSAGIYKPTPCPPHVEGDAVKETAG 170
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
H VE ++ +SFRPQY+ G G+NKDCEEWFFDR+VR RPV +PGSG Q +++ H
Sbjct: 171 HAVVEAHLKTLPLKMSSFRPQYLTGYGSNKDCEEWFFDRLVRGRPVLVPGSGDQLSSVTH 230
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAG 183
DL++M+ A+ N + A+ IFN V +AVTL+GM +LCA AAG+ +I++YDPK
Sbjct: 231 AEDLATMIAAAIGN-DGAAGEIFNCVMPKAVTLNGMVELCAAAAGVEAKIINYDPKDVPD 289
Query: 184 IDAKKAFPFRNMHFYAEPRAAKDILGWR-STTNLPEDLKERFEEYVKIGRDKKAMQFEID 242
++ KKAFPFR +HFY+ A+ +LGW +L +LKERF Y GRD K M FE+D
Sbjct: 290 VEVKKAFPFRPIHFYSSSAKAQKVLGWSPKHPDLGAELKERFAYYKSTGRDAKEMAFEVD 349
Query: 243 DKILESL 249
DKIL +L
Sbjct: 350 DKILAAL 356
>gi|145353867|ref|XP_001421221.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145353942|ref|XP_001421256.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581458|gb|ABO99514.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
gi|144581493|gb|ABO99549.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 333
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/247 (51%), Positives = 169/247 (68%), Gaps = 4/247 (1%)
Query: 6 AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
AKF + N + PVAD+A ++G QFLF+SSAGIYKP PPHVEGD VK +G
Sbjct: 86 AKFDVVVDNNGKDMDTVGPVADFAVAAGASQFLFVSSAGIYKPTPCPPHVEGDAVKETSG 145
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
H VE ++ +SFRPQY+ G G+NKDCEEWFFDR VR RP+ +PGSG Q +++ H
Sbjct: 146 HAVVEAHLKTLPLKMSSFRPQYLTGYGSNKDCEEWFFDRAVRGRPILVPGSGDQLSSVTH 205
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAG 183
DL++M+ AV N +AA+ IFN V+ +AVTL+GMA+LCA+AAG+ +++YDPK
Sbjct: 206 AEDLATMIAAAVGN-DAAAGEIFNCVTTKAVTLNGMAELCAKAAGVEPNVINYDPKDVPD 264
Query: 184 IDAKKAFPFRNMHFYAEPRAAKDILGWR-STTNLPEDLKERFEEYVKIGRDKKAMQFEID 242
++ KKAFPFR +HFY+ A+ +LGW +L +LKERF Y IGRDKK M FE D
Sbjct: 265 VEVKKAFPFRPIHFYSSSAKAQAVLGWSPKHPDLAAELKERFAYYKSIGRDKKEMSFETD 324
Query: 243 DKILESL 249
DKIL ++
Sbjct: 325 DKILAAI 331
>gi|412986493|emb|CCO14919.1| predicted protein [Bathycoccus prasinos]
Length = 369
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/231 (52%), Positives = 157/231 (67%), Gaps = 5/231 (2%)
Query: 23 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-NF-SNWA 80
PVA++AK +G +QF F+SSAGIYKP PPHVEGD VK AGH VEK++ + F A
Sbjct: 140 PVAEFAKEAGAEQFFFVSSAGIYKPTPTPPHVEGDAVKETAGHAIVEKHLVDMKFPKGMA 199
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
SFRPQY+ G G+NKDCEE+FFDRI R +P+ IPGSG QF +++H DL++M+ AV+N
Sbjct: 200 SFRPQYLTGYGSNKDCEEYFFDRIQRGKPIVIPGSGDQFASVSHAEDLATMIASAVDNAN 259
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHFYA 199
A IFN V+ + VTL GMA++CA+A G IV Y + G++AKK FPFR +HFYA
Sbjct: 260 -AKDEIFNCVTQKGVTLRGMAEVCAKAMGKEATIVTYKEGSVEGVEAKKQFPFRVVHFYA 318
Query: 200 EPRAAKDILGWR-STTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 249
A LGW NL LK+R+ EY GRDKK M FE+D+K+L +L
Sbjct: 319 SSAKAMAKLGWEPKHPNLEATLKDRYAEYCASGRDKKEMTFELDEKVLATL 369
>gi|303290011|ref|XP_003064293.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454609|gb|EEH51915.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 362
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/238 (53%), Positives = 161/238 (67%), Gaps = 12/238 (5%)
Query: 23 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
PVAD+A +G KQF F+SSAG+Y P PPH+EGD VK AGH +VE ++ +SF
Sbjct: 124 PVADFAVKAGAKQFFFVSSAGMYIPTVTPPHLEGDAVKESAGHAKVEAHLKTMPFKMSSF 183
Query: 83 RPQYMIGSGNNK---------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
RPQY G GNNK DCEEWFFDRIVR R +P+PGSG Q + +AH D+++M+
Sbjct: 184 RPQYFTGYGNNKGAFYISYHTDCEEWFFDRIVRGRTIPVPGSGDQLSVVAHAEDVATMMA 243
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA--GIDAKKAFP 191
AV N +AA+ IFN V++RAVTL+GMA+LCA AAG +I +YDPK G++ KKAFP
Sbjct: 244 AAVGN-DAAAGQIFNAVTNRAVTLNGMAQLCAAAAGAEPKIANYDPKNLPDGVEVKKAFP 302
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 249
FR +HFY+ P A ++L W +L DLKERF YV GRDKK M FE DDKIL +
Sbjct: 303 FRPIHFYSYPAKALELLDWAPKHDLASDLKERFAFYVASGRDKKEMTFETDDKILRHI 360
>gi|428317846|ref|YP_007115728.1| NAD-dependent epimerase/dehydratase [Oscillatoria nigro-viridis PCC
7112]
gi|428241526|gb|AFZ07312.1| NAD-dependent epimerase/dehydratase [Oscillatoria nigro-viridis PCC
7112]
Length = 313
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 153/257 (59%), Gaps = 10/257 (3%)
Query: 2 EFNYAKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK 60
+ + +F A+F N +P+A+ K V+ F+++SSAG+Y +D+ PH+EGD
Sbjct: 58 KLSTVEFDAVFDNNGRELSDTKPLAEIFKGR-VQHFVYMSSAGVYLKSDQMPHIEGDATD 116
Query: 61 PDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 117
P + H+ + E Y++E+ W S RP Y+ G N D E WFFDRIVR RP+PIPG+GM
Sbjct: 117 PKSRHLGKCETENYLAESGLPWTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPIPIPGNGM 176
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEI 174
FT + H +DL+ + + N A I+N+ DR VT DG+A+ C QAAG ++I
Sbjct: 177 HFTQLGHCQDLARAMAAVLGNSRAI-GQIYNVSGDRFVTFDGLARACIQAAGKSPDAIKI 235
Query: 175 VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRD 233
VHYDPK KKAFP R HF+A A L W+ +L L++ F+ +YV GRD
Sbjct: 236 VHYDPKQFDFGKKKAFPMRLQHFFASVNKAVTDLNWQPEFDLVSGLQDSFQNDYVVSGRD 295
Query: 234 KKAMQFEIDDKILESLK 250
K + F +DD+IL+S++
Sbjct: 296 KAEIDFSVDDEILKSVQ 312
>gi|334118011|ref|ZP_08492101.1| NAD-dependent epimerase/dehydratase [Microcoleus vaginatus FGP-2]
gi|333459996|gb|EGK88606.1| NAD-dependent epimerase/dehydratase [Microcoleus vaginatus FGP-2]
Length = 313
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 151/257 (58%), Gaps = 10/257 (3%)
Query: 2 EFNYAKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK 60
+ + +F A+F N +P+A+ K V+ F+++SSAG+Y +D+ PH+EGD
Sbjct: 58 KLSTVEFDAVFDNNGRELSDTKPLAEIFKGR-VQHFVYMSSAGVYLKSDQMPHIEGDATD 116
Query: 61 PDAGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 117
P + H+ + E Y++ + W S RP Y+ G N D E WFFDRI R RP+PIPG+GM
Sbjct: 117 PKSRHLGKCETENYLAASGLPWTSIRPTYIYGPQNYNDLEAWFFDRIARDRPIPIPGNGM 176
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEI 174
FT + H +DL+ + + N A I+N+ DR VT DG+A+ C QAAG ++I
Sbjct: 177 HFTQLGHCQDLAKAMAAVLGNSRAI-GQIYNVSGDRFVTFDGLARACIQAAGKSPDAIKI 235
Query: 175 VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRD 233
VHYDPK KKAFP R HF+A A L W+ +L LK+ F+ +YV GRD
Sbjct: 236 VHYDPKQFDFGKKKAFPMRLQHFFASVNKAVTDLNWQPEFDLLSGLKDSFQNDYVVSGRD 295
Query: 234 KKAMQFEIDDKILESLK 250
K + F +DD+IL+S++
Sbjct: 296 KAEIDFSVDDEILKSVQ 312
>gi|427731981|ref|YP_007078218.1| nucleoside-diphosphate-sugar epimerase [Nostoc sp. PCC 7524]
gi|427367900|gb|AFY50621.1| nucleoside-diphosphate-sugar epimerase [Nostoc sp. PCC 7524]
Length = 312
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 139/223 (62%), Gaps = 8/223 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
V+ F+++SSAG+Y +D+ PHVEGD V P + H + E Y+ + + S RP Y+ G
Sbjct: 90 VQHFIYMSSAGVYLKSDQLPHVEGDTVDPKSRHKGKHETEAYLQQQGLPFTSIRPTYIYG 149
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N D E WFFDRIVR RP+PIPG+G+ T + HV+DL++ ++ + N +A I+N+
Sbjct: 150 PMNYNDLESWFFDRIVRDRPIPIPGNGLHITQLGHVQDLATAMSQVIGNKQAI-GQIYNI 208
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ CAQAAG ++IVHYDPK +KAFP R HF+A A+
Sbjct: 209 SGDRFVTFDGLARACAQAAGKSPDAIKIVHYDPKKFDFGKRKAFPMRVQHFFASVDKAQT 268
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKILES 248
L W+ +L L + FE +Y+ GRDK + F +D++IL++
Sbjct: 269 QLNWQPQYDLISGLADSFEKDYLATGRDKTEIDFSVDEEILQA 311
>gi|428304521|ref|YP_007141346.1| NAD-dependent epimerase/dehydratase [Crinalium epipsammum PCC 9333]
gi|428246056|gb|AFZ11836.1| NAD-dependent epimerase/dehydratase [Crinalium epipsammum PCC 9333]
Length = 313
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 148/247 (59%), Gaps = 10/247 (4%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
KF A+F N +P+A+ + V+ F+++SSAG+Y +D+ PH+EGD V P + H
Sbjct: 63 KFDAIFDNNGRELSDTQPLAEIFQDK-VQHFVYMSSAGVYLKSDQMPHIEGDAVDPKSRH 121
Query: 66 V---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E Y++E+ + S RP Y+ G+ N D E WFFDRIVR RP+PIPG+GM T
Sbjct: 122 KGKHETETYLTESGLPFTSIRPTYIYGAQNYNDLEAWFFDRIVRDRPIPIPGNGMHITQF 181
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDP 179
HV+DL+S + L + N +A I+N+ DR VT DG+A+ CA AAG ++I+HYDP
Sbjct: 182 GHVKDLASAMALVLGNSQAV-GQIYNVSGDRFVTFDGLARACAVAAGKSPDNLQIIHYDP 240
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
K +KAFP R HF+A AK L W+ +L LK+ F+ +++ RD+ +
Sbjct: 241 KKFDFGKRKAFPMRVQHFFASVNKAKTQLNWQPEFDLISGLKDSFQNDFIASNRDQSEID 300
Query: 239 FEIDDKI 245
F DD+I
Sbjct: 301 FSTDDQI 307
>gi|443315917|ref|ZP_21045385.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 6406]
gi|442784490|gb|ELR94362.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 6406]
Length = 311
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 148/250 (59%), Gaps = 12/250 (4%)
Query: 8 FKALFRTNNNFRLQRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
F A+F +NN R Q + G V+ +++SSAG+Y +D+ PHVEGD V P++ H
Sbjct: 64 FDAIF--DNNGREQSDTQPLVELFGDQVQHLIYVSSAGVYLKSDQMPHVEGDAVDPNSRH 121
Query: 66 ---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E Y++ + + RP Y+ G N D E WFFDR+VR RP+PIPG GM T +
Sbjct: 122 KGKFETEAYLAAQGVPFTAIRPVYIYGPQNYNDLEAWFFDRLVRDRPIPIPGDGMALTQL 181
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG---LPVEIVHYDP 179
HV+DL++ + + NP A +N+ DRAVT DG+A+ CA AAG +++VHYDP
Sbjct: 182 GHVQDLAAAMAAVLSNPRAVGQT-YNISGDRAVTFDGLARACAIAAGKDPQALDLVHYDP 240
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
K +KAFP R HF+ AK LGW+ NL LK+ FE +Y+ GR ++ +
Sbjct: 241 KQFDFGKRKAFPMRVQHFFTAIDRAKADLGWQPQFNLVNGLKDAFEKDYLVSGRHQQTID 300
Query: 239 FEIDDKILES 248
F++DD+IL +
Sbjct: 301 FDLDDQILAA 310
>gi|427710298|ref|YP_007052675.1| NAD-dependent epimerase/dehydratase [Nostoc sp. PCC 7107]
gi|427362803|gb|AFY45525.1| NAD-dependent epimerase/dehydratase [Nostoc sp. PCC 7107]
Length = 310
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 141/223 (63%), Gaps = 8/223 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
V+QF+++SSAG+Y +D+ PHVEGD V P + H + E Y++E + S RP Y+ G
Sbjct: 88 VQQFIYMSSAGVYLKSDQLPHVEGDAVDPKSRHKGKHETEAYLAEKGLPFTSIRPTYIYG 147
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N + E WFFDR+VR RP+PIPG+G+ T + HV+DL++ ++L + N + A I+N+
Sbjct: 148 PSNYNELEGWFFDRVVRDRPIPIPGNGLHITQLGHVQDLATAMSLVIGN-QKAIGQIYNI 206
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ CA AAG ++IVHYDPK +KAFP R HF+A + A+
Sbjct: 207 SGDRFVTFDGLARACAVAAGKSPDAIKIVHYDPKKFDFGKRKAFPMRVQHFFASVQKAQT 266
Query: 207 ILGWRSTTNLPEDLKERF-EEYVKIGRDKKAMQFEIDDKILES 248
L W+ +L L + +++ GRDKK + F +D++IL++
Sbjct: 267 ELNWQPEYDLISGLTDSLNNDFLASGRDKKEVDFSVDEEILQT 309
>gi|428203489|ref|YP_007082078.1| nucleoside-diphosphate-sugar epimerase [Pleurocapsa sp. PCC 7327]
gi|427980921|gb|AFY78521.1| nucleoside-diphosphate-sugar epimerase [Pleurocapsa sp. PCC 7327]
Length = 342
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 149/250 (59%), Gaps = 10/250 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH- 65
F A+F N +P+A+ K +K F+++SSAG+Y +D+ PH+EGD V P + H
Sbjct: 95 FDAIFDNNGRELSDTQPLAEIFKDK-IKHFVYVSSAGVYLKSDQMPHLEGDPVDPKSRHQ 153
Query: 66 --VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
Q E Y+++ W S RP Y+ G N D E WFFDRIVR RP+PIPG+G+ T
Sbjct: 154 GKFQTESYLAQAGLPWTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPIPIPGNGLHITQFG 213
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPK 180
HV+DL+S + + N E A I+N+ DR VT +G+A+ CA AAG +++VHYDPK
Sbjct: 214 HVKDLASAMAAVLGN-ERAIGEIYNISGDRYVTFEGLARTCAAAAGKSPDDLKLVHYDPK 272
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
+KAFP R HF+A+ A + L W+ +L LK+ F+ +Y+ GR + + F
Sbjct: 273 KFDFGKRKAFPIRVQHFFADVHKAIEHLDWKPEYDLLSGLKDSFQNDYLASGRHQAEIDF 332
Query: 240 EIDDKILESL 249
+D++IL ++
Sbjct: 333 SVDEEILAAV 342
>gi|32307602|gb|AAP79206.1| mRNA binding protein [Bigelowiella natans]
Length = 325
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 139/224 (62%), Gaps = 3/224 (1%)
Query: 25 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 84
AD AK GVK + ++SSAG+YKP P E VK AG +VE Y++ W+SFRP
Sbjct: 96 ADKAKEWGVKHYAYVSSAGMYKPGVIFPMSESLPVKESAGQKEVEDYLNSLGLPWSSFRP 155
Query: 85 QYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 143
QY+ G NK D ++FFDRIVR RPVP+ G+G Q + H D++SML ++ E A
Sbjct: 156 QYIYGPLTNKRDYLDYFFDRIVRGRPVPVAGNGQQLVTLTHAADVASMLGSVLDAGEKAH 215
Query: 144 SNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 202
+FN +D+ +T+D + +CA+ AG+P IVHYDPK ++ KKAFPFR+ +F+ P
Sbjct: 216 MKVFNCATDQLITVDDLIHVCAKIAGVPTPRIVHYDPKKVKLE-KKAFPFRDSNFFVAPD 274
Query: 203 AAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
AK LGW +L ++LK FE Y +G+ +K M F IDD IL
Sbjct: 275 RAKAELGWSCQHDLEKELKAYFEGYRALGKTEKDMSFPIDDTIL 318
>gi|302830021|ref|XP_002946577.1| chloroplast ribosome-associated protein [Volvox carteri f.
nagariensis]
gi|300268323|gb|EFJ52504.1| chloroplast ribosome-associated protein [Volvox carteri f.
nagariensis]
Length = 440
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 135/225 (60%), Gaps = 7/225 (3%)
Query: 33 VKQFLFISSAGIYKPAD--EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 90
V ++F+SSAG YK AD EP HVEGD K AGHV+VE Y+ + + F+P Y+ G
Sbjct: 132 VDHYVFVSSAGAYK-ADSIEPMHVEGDARKSTAGHVEVEAYLEKARVPYTVFQPLYIYGP 190
Query: 91 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 150
KDCE+WF DRI+R RPVPIP G+Q T++ HV D+++ML L N EA ++N+
Sbjct: 191 NTAKDCEQWFVDRIIRDRPVPIPSPGIQLTSLTHVEDVAAMLALVPGNREAI-GQMYNVC 249
Query: 151 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK---KAFPFRNMHFYAEPRAAKDI 207
SDR ++ G+ K A+A G IV Y P+ G + FPFR +HF+A AK
Sbjct: 250 SDRCISFVGICKSVAKALGKEANIVLYSPEKVGTGKSGKAEGFPFRTVHFFASSDKAKRE 309
Query: 208 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
LGW+ + +D+ +Y GRDKK + F IDDKILE+L P
Sbjct: 310 LGWKPKHDFQKDVAALVADYKAQGRDKKDVDFSIDDKILEALGKP 354
>gi|119512443|ref|ZP_01631525.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Nodularia spumigena
CCY9414]
gi|119462909|gb|EAW43864.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Nodularia spumigena
CCY9414]
Length = 312
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 148/251 (58%), Gaps = 10/251 (3%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
KF +F N +P+A+ + V+ F+++SSAG+Y +D+ PH+EGD V P + H
Sbjct: 64 KFDVIFDNNGRELTDTQPLAEIFQDQ-VQHFVYMSSAGVYLKSDQLPHIEGDTVDPKSRH 122
Query: 66 V---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E Y+ + S RP Y+ G N D E WFFDRIVR RP+PIPG+G+ T +
Sbjct: 123 RGKHETEAYLMQQNLPVTSIRPTYIYGPQNYNDLESWFFDRIVRDRPIPIPGNGLHITQL 182
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDP 179
HV+DL++ ++ + N +A I+N+ DR VT DG+A+ CA AAG V+IVHYDP
Sbjct: 183 GHVKDLATAMSQVIGNSQAI-RQIYNISGDRFVTFDGLARACAVAAGKSPDAVKIVHYDP 241
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
K +KAFP R HF+A A L W+ +L L + E +Y+K GRDK +
Sbjct: 242 KKFDFGKRKAFPMRVQHFFASVNKAMTELAWQPEYDLISGLADSLENDYLKTGRDKAEVD 301
Query: 239 FEIDDKILESL 249
F +D++IL+++
Sbjct: 302 FSMDEEILQAV 312
>gi|257059864|ref|YP_003137752.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8802]
gi|256590030|gb|ACV00917.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8802]
Length = 309
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 135/221 (61%), Gaps = 8/221 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
V+ F+++SSAG+Y + + PH+EGD V P++ H + E Y+ ++ W S RP Y+ G
Sbjct: 89 VEHFVYVSSAGVYLKSHQMPHIEGDAVDPNSRHKGKFETESYLEKSGIPWTSIRPTYIYG 148
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N D E WFFDRIVR RP+PIPG+G+ FT HV+DL+ + + N +A + I+N+
Sbjct: 149 PQNYNDLEAWFFDRIVRNRPLPIPGNGLHFTQFGHVQDLAKAMASVLGNKQAINQ-IYNI 207
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
+R VT DG+A CA AAG ++IVHYDPK KKAFP R HF+A+ A
Sbjct: 208 SGERYVTFDGLAYACAIAAGKSPDDIKIVHYDPKQFDFGKKKAFPLRTQHFFADIHKALK 267
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKIL 246
L W +L LK+ FE +Y+ GRDK + F +DD+IL
Sbjct: 268 DLDWTPEYDLIGGLKDSFENDYLASGRDKIEVDFSVDDQIL 308
>gi|172038692|ref|YP_001805193.1| mRNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354553970|ref|ZP_08973275.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. ATCC 51472]
gi|171700146|gb|ACB53127.1| mRNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353553649|gb|EHC23040.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. ATCC 51472]
Length = 311
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 135/221 (61%), Gaps = 8/221 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
VK F+++SSAG+Y +D+ PH+EGD V P++ H + E Y+ ++ W S RP Y+ G
Sbjct: 89 VKHFVYVSSAGVYLKSDQMPHIEGDEVDPNSRHKGKFETESYLGKSGIPWTSIRPTYIYG 148
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N D E WFFDRIVR RP+PIPG+G+ FT H++DL+ + + N E A I+N+
Sbjct: 149 PQNYNDLEAWFFDRIVRNRPIPIPGNGLNFTQFGHIQDLAKGMAAVLGN-EQAIGQIYNI 207
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
+R VT DG+AK CA AAG ++IVHYDPK KK FP R HF+A+ A
Sbjct: 208 SGERYVTFDGLAKACAVAAGKSADDIKIVHYDPKQFDFGKKKVFPLRMQHFFADIHKALQ 267
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKIL 246
L W+ +L LK+ FE +Y+ RD+ + F +D++IL
Sbjct: 268 ELDWKPEYDLINGLKDSFENDYLASKRDQADIDFSLDEQIL 308
>gi|170078373|ref|YP_001735011.1| NAD dependent epimerase/dehydratase family protein [Synechococcus
sp. PCC 7002]
gi|169886042|gb|ACA99755.1| NAD dependent epimerase/dehydratase family protein [Synechococcus
sp. PCC 7002]
Length = 310
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 147/247 (59%), Gaps = 10/247 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+F N +P+A+ + VK F+++SSAG+Y P D+PPH E D V P++ H
Sbjct: 63 FDAIFDNNGRELAHTQPLAEIF-AGKVKHFVYVSSAGVYLPTDQPPHKEADPVDPNSRHK 121
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y++++ W S RP Y+ G+ N D E WFFDRIVR RP+PIPG G T
Sbjct: 122 GKHETEAYLAQSDLPWTSIRPTYIYGAKNYNDLEAWFFDRIVRDRPIPIPGDGQLITQFG 181
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPK 180
HV DL++ + ++NP+A I+N+ DR VT G+AK CA AAG + +V+Y+PK
Sbjct: 182 HVYDLATAMAAVLDNPKAIGQ-IYNISGDRFVTFTGLAKACAVAAGKDPDTLALVYYNPK 240
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
+ +KAFP R HF A+ A + L W+ +L LK+ F+ +Y+ GRDK + F
Sbjct: 241 QFDLGKRKAFPIRAQHFMADINKALNDLDWQPKYDLVSGLKDSFQNDYLANGRDKVDLDF 300
Query: 240 EIDDKIL 246
+DD+IL
Sbjct: 301 SLDDQIL 307
>gi|113478014|ref|YP_724075.1| NAD-dependent epimerase/dehydratase [Trichodesmium erythraeum
IMS101]
gi|110169062|gb|ABG53602.1| NAD-dependent epimerase/dehydratase [Trichodesmium erythraeum
IMS101]
Length = 310
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 149/250 (59%), Gaps = 12/250 (4%)
Query: 7 KFKALFRTNNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
KF A+F NN +L +P+A+ K VK F+++SSAG+Y +D+ PH+EGD + P +
Sbjct: 63 KFDAIF-DNNGRKLSDTKPLAEIFKGQ-VKHFVYMSSAGVYLKSDQMPHIEGDTIDPKSR 120
Query: 65 HV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN 121
H+ + E ++ W S RP Y+ G N D E WFFDRIVR RP+PIPG+G+ T
Sbjct: 121 HLGKYETETELANQGLPWTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPIPIPGNGLHITQ 180
Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYD 178
+ HV+DL +M + + + A I+N+ +R +T DG+A+ CA+A G +++VHYD
Sbjct: 181 LGHVKDL-AMAMVNILGNDKAIGQIYNISGERFITFDGLARSCAEATGKSPDSIKLVHYD 239
Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAM 237
PK KKAFP R HF+A A L W+ +L LK+ FE +++ GR + +
Sbjct: 240 PKKFDFGKKKAFPLRMQHFFASINKAITELNWQPKYDLISGLKDSFENDFIASGRAQAEV 299
Query: 238 QFEIDDKILE 247
F IDD+IL+
Sbjct: 300 DFSIDDEILK 309
>gi|300868027|ref|ZP_07112665.1| NAD-dependent epimerase/dehydratase [Oscillatoria sp. PCC 6506]
gi|300333947|emb|CBN57843.1| NAD-dependent epimerase/dehydratase [Oscillatoria sp. PCC 6506]
Length = 312
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 150/251 (59%), Gaps = 9/251 (3%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
KF A+F N +P+A+ K+ VK F+++SSAG+Y +D+ PH+EGD P + H
Sbjct: 63 KFDAIFDNNGRELSDTQPLAEIFKNQ-VKHFVYMSSAGVYLKSDQLPHIEGDATDPKSRH 121
Query: 66 V---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ + E Y+ + W S RP Y+ G N D E WFFDRIVR RP+PIPG+GM T +
Sbjct: 122 LGKYETETYLKDAGLPWTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPIPIPGNGMHITQL 181
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPK 180
H +DL+ + + N E A I+N+ DR VT DG+A+ CA AAG ++IVHYDPK
Sbjct: 182 GHCQDLAKAMAAVLGN-EKAIGQIYNVSGDRYVTFDGLARACAAAAGKSTDIKIVHYDPK 240
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
+KAFP R HF+A A L W+ +L LK+ F+ +Y+ GRDK + F
Sbjct: 241 KFDFGKRKAFPMRVQHFFASVNKAMSELNWQPEFDLVSGLKDSFQNDYLTSGRDKAEIDF 300
Query: 240 EIDDKILESLK 250
+DD+IL++++
Sbjct: 301 SVDDEILQAVQ 311
>gi|354564877|ref|ZP_08984053.1| NAD-dependent epimerase/dehydratase [Fischerella sp. JSC-11]
gi|353550003|gb|EHC19442.1| NAD-dependent epimerase/dehydratase [Fischerella sp. JSC-11]
Length = 311
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 149/250 (59%), Gaps = 10/250 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+F N +P+A+ + V+ F+++SSAG+Y +D+ PH+EGD V P + H
Sbjct: 64 FDAIFDNNGRELTDTQPLAEIFQDR-VQNFIYMSSAGVYLKSDQMPHIEGDAVDPKSRHK 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+ + + S RP Y+ G N D E WFFDRIVR RP+PIPG+G+ T +
Sbjct: 123 GKHETEAYLIQQGIPFTSIRPTYIYGPKNYNDLEAWFFDRIVRDRPIPIPGNGLHITQLG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPK 180
HV+DL++ +T + N +A I+N+ DR VT DG+A+ CA AAG ++IVHYDPK
Sbjct: 183 HVKDLATAMTKVLGNSQAL-RQIYNVSGDRFVTFDGLARACAVAAGKSPDEIKIVHYDPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF-EEYVKIGRDKKAMQF 239
+KAFP R HF+A A L W+ +L L++ F +Y+ GRDK + F
Sbjct: 242 KFDFGKRKAFPLRIQHFFASVNKAMTELDWQPEYDLISGLQDSFGNDYLVSGRDKAEIDF 301
Query: 240 EIDDKILESL 249
+D++IL+++
Sbjct: 302 SVDEEILQTI 311
>gi|428311078|ref|YP_007122055.1| nucleoside-diphosphate-sugar epimerase [Microcoleus sp. PCC 7113]
gi|428252690|gb|AFZ18649.1| nucleoside-diphosphate-sugar epimerase [Microcoleus sp. PCC 7113]
Length = 311
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 147/251 (58%), Gaps = 10/251 (3%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
+F A+F N +P+A+ K VK F+++SSAG+Y +D+ PH+EGD V P + H
Sbjct: 63 QFDAIFDNNGRELSDTQPLAEIFKDR-VKHFVYMSSAGVYLKSDQLPHIEGDPVDPKSRH 121
Query: 66 V---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E ++++ W S RP Y+ G N D E WFFDRIVR RP+PIPG+GM T
Sbjct: 122 KGKHETEAFLAQLGLPWTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPIPIPGNGMHITQF 181
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDP 179
H +DL+ + + N + A I+N+ DR VT DG+A+ CAQAAG ++I+HYDP
Sbjct: 182 GHCKDLARAMAQVLGN-DRAIGQIYNVSGDRYVTFDGLARACAQAAGKSADSIKIMHYDP 240
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
K +KAFP R HF+A+ A L W+ +L LK+ F+ +Y GR + +
Sbjct: 241 KKFDFGKRKAFPMRVQHFFADVNKAMTQLNWQPEYDLISGLKDSFQNDYQASGRHESEVD 300
Query: 239 FEIDDKILESL 249
F +DD+IL+ +
Sbjct: 301 FSLDDEILKGI 311
>gi|75908322|ref|YP_322618.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis
ATCC 29413]
gi|75702047|gb|ABA21723.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis
ATCC 29413]
Length = 313
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 137/223 (61%), Gaps = 8/223 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
V+ F+++SSAG+Y +D+ PH+EGD V P + H + E Y+ + + S RP Y+ G
Sbjct: 90 VQHFVYMSSAGVYLKSDQLPHIEGDKVDPKSRHKGKHETEAYLQQTGLPFTSIRPTYIYG 149
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N D E WFFDRIVR RP+PIPG+G+ T + HV+DL+ ++ + N +A ++N+
Sbjct: 150 PRNYNDLESWFFDRIVRDRPLPIPGNGLHITQLGHVKDLAMAMSQVIGNKQAI-GQVYNI 208
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ CAQA G ++IVHYDPK +KAFP R HF+A A+
Sbjct: 209 SGDRYVTFDGLARACAQALGKSADDIKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAQT 268
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKILES 248
L W+ +L L + +E +YV GRDK + F +D++IL++
Sbjct: 269 ELNWQPQYDLISGLADAYENDYVASGRDKSEIDFSVDEEILKA 311
>gi|440681226|ref|YP_007156021.1| NAD-dependent epimerase/dehydratase [Anabaena cylindrica PCC 7122]
gi|428678345|gb|AFZ57111.1| NAD-dependent epimerase/dehydratase [Anabaena cylindrica PCC 7122]
Length = 310
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 137/224 (61%), Gaps = 8/224 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
V+ F+++SSAG+Y +D+ PH+EGD V P + H + E Y+ ++ + S RP Y+ G
Sbjct: 88 VQHFVYMSSAGVYLKSDQMPHIEGDAVDPKSRHKGKHETEAYLQQSGIPFTSIRPTYIYG 147
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N + E WFFDRIVR RP+PIPG+GM T + HV+DL+ ++ + N + A I+N+
Sbjct: 148 PKNYNELEGWFFDRIVRDRPIPIPGNGMHLTQLGHVQDLAQAMSQVIGN-QKAIQQIYNI 206
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ CA AAG V+IVHYDPK +KAFP R HF+A A
Sbjct: 207 SGDRFVTFDGLARACAVAAGKSPDDVKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAMT 266
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKILESL 249
L W+ +L LK+ E +Y+ GRDK F +DD+IL+++
Sbjct: 267 ELNWQPEYDLISGLKDSLESDYLASGRDKIEKDFSVDDEILKAV 310
>gi|332708749|ref|ZP_08428720.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
gi|332352291|gb|EGJ31860.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
Length = 312
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 135/221 (61%), Gaps = 8/221 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
V+ F+++SSAG+Y +++ PH+EGD V P++ H E Y+ E + + RP Y+ G
Sbjct: 89 VQHFVYMSSAGVYLKSEQLPHLEGDPVDPNSRHKGKHHTEAYLQELGVPFTAIRPTYIYG 148
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N D E WFFDRIVR R +PIPG+GM T + H +DL+ + + NPEA I+N+
Sbjct: 149 PQNYNDVEAWFFDRIVRDRTIPIPGNGMHITQLGHCQDLARAMAAVLGNPEAIGK-IYNV 207
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
+R VT DG+A+ CA A G V++VHYDPK +KAFPFR HF+A+ AK
Sbjct: 208 SGERYVTFDGLARTCAMACGKSASEVKLVHYDPKQFDFGKRKAFPFRLQHFFADIHKAKT 267
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKIL 246
L W+ +L LK+ FE +Y+ GRD+ + F +DD+IL
Sbjct: 268 ELNWQPEYDLLSGLKDSFENDYLASGRDQADVDFAVDDQIL 308
>gi|411118862|ref|ZP_11391242.1| nucleoside-diphosphate-sugar epimerase [Oscillatoriales
cyanobacterium JSC-12]
gi|410710725|gb|EKQ68232.1| nucleoside-diphosphate-sugar epimerase [Oscillatoriales
cyanobacterium JSC-12]
Length = 309
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 145/248 (58%), Gaps = 10/248 (4%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
+F A+F N +P+A+ K VK F+++SSAG+Y +D+ PH+EGD V P++ H
Sbjct: 63 EFDAIFDNNGRELSDTQPLAELFKDQ-VKHFVYMSSAGVYLKSDQMPHIEGDPVDPESRH 121
Query: 66 V---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
E Y++E + S RP Y+ G N D E WFFDRIVR RP+PIPG+GM T
Sbjct: 122 KGKHDTETYLAEQGLPFTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPIPIPGNGMTITQF 181
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDP 179
HV+DL+ + + N A ++N+ DR VT DG+A+ CA AAG ++IVHYDP
Sbjct: 182 GHVKDLAQAMVQVLGNRRAV-GQVYNVSGDRFVTFDGLARACAVAAGKSPDSLKIVHYDP 240
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
K +KAFP R HF+A + A + L W+ +L LK+ FE +Y+ R K +
Sbjct: 241 KQFDFGKRKAFPMRVQHFFASVQKAMNDLYWKPEYDLIAGLKDSFENDYLASERYKAEVD 300
Query: 239 FEIDDKIL 246
F +DD+IL
Sbjct: 301 FSLDDQIL 308
>gi|218246823|ref|YP_002372194.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8801]
gi|218167301|gb|ACK66038.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 8801]
Length = 309
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 133/221 (60%), Gaps = 8/221 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
V+ F+++SSAG+Y + + PH+EGD V P++ H + E Y+ ++ W S RP Y+ G
Sbjct: 89 VEHFVYVSSAGVYLKSHQMPHIEGDAVDPNSRHKGKFETESYLEKSGIPWTSIRPTYIYG 148
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N D E WFFDRIVR P+PIPG+G+ FT HV+DL+ + + N +A + I+N+
Sbjct: 149 PQNYNDLEAWFFDRIVRDHPLPIPGNGLHFTQFGHVQDLAKAMASVLGNKQAI-NQIYNI 207
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
+R VT DG+A CA AAG ++IVHYDPK KKAFP R HF+A+ A
Sbjct: 208 SGERYVTFDGLAYACAIAAGKSPDDIKIVHYDPKQFDFGKKKAFPLRTQHFFADIHKALK 267
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKIL 246
L W +L LK+ E +Y+ GRDK + F +DD+IL
Sbjct: 268 DLDWTPEYDLIGGLKDSLENDYLASGRDKIEVDFSVDDQIL 308
>gi|434405569|ref|YP_007148454.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
gi|428259824|gb|AFZ25774.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
Length = 312
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 136/224 (60%), Gaps = 8/224 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
V+ F+++SSAG+Y +D+ PHVEGD V P + H + E Y+++ + S RP Y+ G
Sbjct: 90 VQHFVYMSSAGVYLKSDQLPHVEGDTVDPQSRHKGKHETEAYLTQQGLPFTSIRPTYIYG 149
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N + E WFFDRIVR RP+ IPG+GM T + HV+DL+ +T V N +A I+N+
Sbjct: 150 PRNYNELESWFFDRIVRDRPLAIPGNGMHITQLGHVKDLAKAMTQVVGNKKAI-GQIYNI 208
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ CA AAG V+IVHYDPK +KAFP R HF+A A+
Sbjct: 209 SGDRFVTFDGLARACAVAAGKSPDAVKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAQI 268
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKILESL 249
L W+ +L L + E +Y+ GRDK + F +D++IL ++
Sbjct: 269 ELNWQPEYDLISGLNDSLENDYLASGRDKAEVDFSLDEEILNAV 312
>gi|159464623|ref|XP_001690541.1| chloroplast stem-loop-binding protein [Chlamydomonas reinhardtii]
gi|158280041|gb|EDP05800.1| chloroplast stem-loop-binding protein [Chlamydomonas reinhardtii]
Length = 439
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 133/222 (59%), Gaps = 7/222 (3%)
Query: 33 VKQFLFISSAGIYKPAD--EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 90
V ++F+SSAG YK AD EP HVEGD K AGHV+VE Y+ + + F+P Y+ G
Sbjct: 132 VDHYVFVSSAGAYK-ADPIEPMHVEGDARKSTAGHVEVEAYLEKARLPYTVFQPLYIYGP 190
Query: 91 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 150
KDCE+WF DRI+R RPV +P G+Q T++ HV D++SML AV AA +N+
Sbjct: 191 NTAKDCEQWFVDRIIRDRPVLLPAPGVQLTSLTHVEDVASMLA-AVPGNRAAIGQHYNVC 249
Query: 151 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK---KAFPFRNMHFYAEPRAAKDI 207
SDR +T G+AK +A G EI+ Y P+ G + FPFR +HF+A AK
Sbjct: 250 SDRCITFTGIAKAIGKALGKDPEIILYSPEKVGTGKSGKAEGFPFRTVHFFASADKAKRE 309
Query: 208 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 249
LGW+ + +D++ +Y GRDKK + F +DDKIL +L
Sbjct: 310 LGWKPKHDFQKDVQGLVNDYKANGRDKKEVDFSVDDKILAAL 351
>gi|443321884|ref|ZP_21050923.1| nucleoside-diphosphate-sugar epimerase [Gloeocapsa sp. PCC 73106]
gi|442788428|gb|ELR98122.1| nucleoside-diphosphate-sugar epimerase [Gloeocapsa sp. PCC 73106]
Length = 311
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 141/250 (56%), Gaps = 10/250 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH- 65
F A+F N +P+ + + ++ F+++SSAG+Y P + PH EGD + P + H
Sbjct: 64 FDAIFDNNGRELADTQPLVELFQGK-IQHFVYVSSAGVYLPTHQLPHREGDAIDPQSRHR 122
Query: 66 --VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y++E W S RP Y+ G N D E WFFDR+VR RP+PIPG+G+ T
Sbjct: 123 GKYETEAYLTEMGLPWTSIRPTYIYGPQNYNDLEAWFFDRLVRDRPLPIPGNGLHLTQFG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPK 180
HV DL++ + + N +A I+N+ DR VT DG+A CA A G + +VHY+P+
Sbjct: 183 HVADLATAMASVLGNHKAI-GQIYNISGDRYVTFDGLAYACAAALGKSPDSLSLVHYNPR 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE-YVKIGRDKKAMQF 239
KAFP R HF A+ A L W +L LK+ FE+ Y+ GRD++ + F
Sbjct: 242 DFDFGKSKAFPLRVQHFCADIHKATTELDWLPQFDLVSGLKDSFEQDYLVSGRDRQEIDF 301
Query: 240 EIDDKILESL 249
+DDKILES+
Sbjct: 302 SVDDKILESI 311
>gi|17232323|ref|NP_488871.1| mRNA-binding protein [Nostoc sp. PCC 7120]
gi|17133968|dbj|BAB76530.1| mRNA-binding protein [Nostoc sp. PCC 7120]
Length = 311
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 136/223 (60%), Gaps = 8/223 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
V+ F+++SSAG+Y +D+ PH+EGD V P + H + E Y+ + + S RP Y+ G
Sbjct: 90 VQHFVYMSSAGVYLKSDQLPHIEGDKVDPKSRHKGKHETEAYLQQIGLPFTSIRPTYIYG 149
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N D E WFFDRIVR RP+PIP +G+ T + HV+DL+ ++ + N +A ++N+
Sbjct: 150 PRNYNDLESWFFDRIVRDRPLPIPVNGLHITQLGHVKDLAMAMSQVIGNKQAIGQ-VYNI 208
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ CAQA G ++IVHYDPK +KAFP R HF+A A+
Sbjct: 209 SGDRYVTFDGLARACAQALGKSADDLKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAQT 268
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKILES 248
L W+ +L L + +E +YV GRDK + F +DD+IL++
Sbjct: 269 ELNWQPQYDLISGLADAYENDYVASGRDKSEIDFSVDDEILKA 311
>gi|225450527|ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic [Vitis
vinifera]
gi|147773479|emb|CAN73432.1| hypothetical protein VITISV_032681 [Vitis vinifera]
gi|296089806|emb|CBI39625.3| unnamed protein product [Vitis vinifera]
Length = 378
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 127/218 (58%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+YK +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 155 LQQYIYCSSAGVYKKSDLLPHCETDAVDPKSRHKGKLETESLLDSRGVNWTSIRPVYIYG 214
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIP SG+Q T + HV+DL+ L + N E AS +FN+
Sbjct: 215 PLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFLLVLSN-EKASKQVFNI 273
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT DG+A+ CA+ AG P EIVHY+PK KKAFPFR+ HF+A AK +L
Sbjct: 274 SGEKYVTFDGLARACAKGAGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVL 333
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW+ +L E L + + G +K F DD IL
Sbjct: 334 GWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIIL 371
>gi|307150534|ref|YP_003885918.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7822]
gi|306980762|gb|ADN12643.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7822]
Length = 311
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 149/251 (59%), Gaps = 10/251 (3%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
KF A+F N +P+A+ K ++ F+++SSAG+Y+ +D+ PH+EGD V P++ H
Sbjct: 63 KFDAIFDNNGRELNDTQPLAEIFKDQ-IQHFIYVSSAGVYQKSDQMPHIEGDPVDPNSRH 121
Query: 66 ---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E Y+++ W S RP Y+ G N D E WFFDR+VR RP+ IPG+G+ T +
Sbjct: 122 KGKFETEDYLAKAGIPWTSIRPTYIYGPQNYNDLEAWFFDRLVRDRPILIPGNGLHITQL 181
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDP 179
HV+DL++ + + N +A I+N+ +R VT DG+AK CA A G ++++HY+P
Sbjct: 182 GHVQDLAAAMAAVLGNDQAIGQ-IYNISGERYVTFDGLAKACAVAVGKSPDEIKLLHYNP 240
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
K +K+FP R HF+A+ A L W +L LK+ +E +Y+ GR + +
Sbjct: 241 KKFDFGKRKSFPLRVQHFFADVHKAMTQLNWTPEFDLVSGLKDSYEHDYLPSGRHQAEID 300
Query: 239 FEIDDKILESL 249
F +D++IL +L
Sbjct: 301 FSVDEEILSTL 311
>gi|34398358|gb|AAO22241.1| 41 kDa ribosome-associated protein precursor [Chlamydomonas
reinhardtii]
Length = 439
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 133/222 (59%), Gaps = 7/222 (3%)
Query: 33 VKQFLFISSAGIYKPAD--EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS 90
V ++F+SSAG YK AD EP HVEGD K AGHV+VE Y+ + + F+P Y+ G
Sbjct: 132 VDHYVFVSSAGAYK-ADPIEPMHVEGDPRKSTAGHVEVEAYLEKARLPYTVFQPLYIYGP 190
Query: 91 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 150
KDCE+WF DRI+R RPV +P G+Q T++ HV D++SML AV AA +N+
Sbjct: 191 NTAKDCEQWFVDRIIRDRPVLLPAPGVQLTSLTHVEDVASMLA-AVPGNRAAIGQHYNVC 249
Query: 151 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK---KAFPFRNMHFYAEPRAAKDI 207
SDR +T G+AK +A G EI+ Y P+ G + FPFR +HF+A AK
Sbjct: 250 SDRCITFTGIAKAIGKALGKDPEIILYSPEKVGTGKSGKAEGFPFRTVHFFASADKAKRE 309
Query: 208 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 249
LGW+ + +D++ +Y GRDKK + F +DDKIL +L
Sbjct: 310 LGWKPKHDFQKDVQGLVNDYKANGRDKKEVDFSVDDKILAAL 351
>gi|67922306|ref|ZP_00515819.1| similar to Nucleoside-diphosphate-sugar epimerases [Crocosphaera
watsonii WH 8501]
gi|67855882|gb|EAM51128.1| similar to Nucleoside-diphosphate-sugar epimerases [Crocosphaera
watsonii WH 8501]
Length = 311
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 143/249 (57%), Gaps = 10/249 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH- 65
F+A+F N +P+ + K +K F+++SSAG+Y + + PH+EGD V P++ H
Sbjct: 64 FEAIFDNNGRELSDTQPLIEIFKDQ-LKHFVYVSSAGVYLKSGQMPHIEGDEVDPNSRHK 122
Query: 66 --VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
E Y+ ++ W S RP Y+ G N D E WFFDRIVR RP+PIP +G+ T
Sbjct: 123 GKFATESYLEKSGIPWTSIRPSYIYGPQNYNDLEAWFFDRIVRNRPIPIPSNGLHITQFG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE---IVHYDPK 180
H++DL + + + N E A I+N+ +R VT DG+AK CA AAG + I+HYDPK
Sbjct: 183 HIQDLVTAMAAVLGN-EQAIGQIYNISGERYVTFDGLAKACAVAAGKSADDLNIIHYDPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
KKAFP R HF+A+ A L W+ +L LK+ FE +Y+ RD+ + F
Sbjct: 242 QFDFGKKKAFPLRIQHFFADIHKALQELNWQPKYDLISGLKDSFENDYLASKRDQAEIDF 301
Query: 240 EIDDKILES 248
+D++IL +
Sbjct: 302 SLDEQILSA 310
>gi|416389981|ref|ZP_11685430.1| mRNA-binding protein [Crocosphaera watsonii WH 0003]
gi|357264136|gb|EHJ13062.1| mRNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 311
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 143/249 (57%), Gaps = 10/249 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH- 65
F+A+F N +P+ + K +K F+++SSAG+Y + + PH+EGD V P++ H
Sbjct: 64 FEAIFDNNGRELSDTQPLIEIFKDQ-LKHFVYVSSAGVYLKSGQMPHIEGDEVDPNSRHK 122
Query: 66 --VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
E Y+ ++ W S RP Y+ G N D E WFFDRIVR RP+PIP +G+ T
Sbjct: 123 GKFATESYLEKSGIPWTSIRPSYIYGPQNYNDLEAWFFDRIVRNRPIPIPSNGLHITQFG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE---IVHYDPK 180
H++DL + + + N E A I+N+ +R VT DG+AK CA AAG + I+HYDPK
Sbjct: 183 HIQDLVTAMAAVLGN-EQAIGQIYNISGERYVTFDGLAKACAVAAGKSADDLNIIHYDPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
KKAFP R HF+A+ A L W+ +L LK+ FE +Y+ RD+ + F
Sbjct: 242 QFDFGKKKAFPLRIQHFFADIHKALQELNWQPKYDLISGLKDSFENDYLASQRDQAEIDF 301
Query: 240 EIDDKILES 248
+D++IL +
Sbjct: 302 SLDEQILSA 310
>gi|218439709|ref|YP_002378038.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7424]
gi|218172437|gb|ACK71170.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7424]
Length = 311
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 144/251 (57%), Gaps = 10/251 (3%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
KF A+F N +P+A+ K ++ F+++SSAG+Y+ D+ PH EGD V P++ H
Sbjct: 63 KFDAIFDNNGRELTDTQPLAEIFKDH-IQHFVYVSSAGVYQKTDQMPHREGDPVDPNSRH 121
Query: 66 ---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E Y+++ W S RP Y+ G N D E WFFDRIVR RP+ IP G T +
Sbjct: 122 KGKFETEDYLAKTGLPWTSIRPTYIYGPQNYNDLEAWFFDRIVRDRPILIPAHGSYITQL 181
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDP 179
HV DL++ + + NP+A I+N+ DR VT DG+AK CA AAG ++++HY+P
Sbjct: 182 GHVHDLATAMAAVLNNPKAIGQ-IYNVSGDRYVTFDGLAKACAIAAGKSPDEIKLLHYNP 240
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
K +K+FP R HF+A+ A + L W +L LK+ +E +Y+ GR + +
Sbjct: 241 KQFDFGKRKSFPLRTQHFFADVHKAMNDLNWTPEYDLISGLKDSYENDYLASGRHQAEID 300
Query: 239 FEIDDKILESL 249
F +D+ IL +
Sbjct: 301 FSVDEDILSAF 311
>gi|119487296|ref|ZP_01621047.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC
8106]
gi|119455851|gb|EAW36986.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC
8106]
Length = 310
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 143/250 (57%), Gaps = 10/250 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+F N +P+AD K VK F+++SSAG+Y + E PH+EGD P + H+
Sbjct: 64 FDAIFDNNGRQLSDTQPLADLFKGK-VKHFVYMSSAGVYLKSPEMPHIEGDKTDPKSRHL 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+ E W S RP Y+ G N E WFFDRIV RP+PIPG+G+ T +
Sbjct: 123 GKYETETYLQEQQLPWTSIRPTYIYGPQNYNPLESWFFDRIVANRPIPIPGNGLHITQLG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE---IVHYDPK 180
HV+DL++ + +AV E A ++N+ +R VT DG+A CA AAG E IVHYDPK
Sbjct: 183 HVKDLANAM-VAVLGNENAIGQVYNISGERYVTFDGLAGACAVAAGKSAEDLNIVHYDPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFE 240
KK FP R HF+A+ A + L W+ +L LK+ FE + DK + F
Sbjct: 242 QFDFGKKKPFPLRLQHFFADVHKAMNELNWQPEFDLVSGLKDSFENDYQT-TDKAEVDFS 300
Query: 241 IDDKILESLK 250
+DD+I+++++
Sbjct: 301 LDDEIIKAVQ 310
>gi|409994115|ref|ZP_11277235.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis str.
Paraca]
gi|291570466|dbj|BAI92738.1| mRNA-binding protein [Arthrospira platensis NIES-39]
gi|409935028|gb|EKN76572.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis str.
Paraca]
Length = 311
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 142/248 (57%), Gaps = 9/248 (3%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F +F N +P+AD VK F+++SSAG+Y +D+ PH+EGD P + H+
Sbjct: 64 FDVIFDNNGRQLSDTQPLADLFNGQ-VKHFVYMSSAGVYLKSDQMPHIEGDPTDPKSRHL 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+ + W S RP Y+ G N E WFFDRIV KRP+P+PG+GM T +
Sbjct: 123 GKYETETYLQKVGIPWTSIRPTYIYGPQNYNPLESWFFDRIVAKRPIPVPGNGMHITQLG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPK 180
HV DL++ + +AV + A I+N+ DR VT DG+AK CA AAG ++++HYDPK
Sbjct: 183 HVEDLANAM-VAVLGNQTAIGQIYNISGDRFVTFDGLAKACAIAAGQSPDDLQLIHYDPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFE 240
+KAFP R HF+A+ A + L W+ +L LK+ F+ I ++ + F
Sbjct: 242 KFDFGKRKAFPLRVQHFFADVHKAINQLNWQPKYDLISGLKDSFQNDYIINSNQGEVDFS 301
Query: 241 IDDKILES 248
DD+I+++
Sbjct: 302 TDDEIIKA 309
>gi|428299906|ref|YP_007138212.1| NAD-dependent epimerase/dehydratase [Calothrix sp. PCC 6303]
gi|428236450|gb|AFZ02240.1| NAD-dependent epimerase/dehydratase [Calothrix sp. PCC 6303]
Length = 312
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 143/248 (57%), Gaps = 10/248 (4%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
KF A+F N +P+A+ + S V+ F+++SSAG+Y +D+ PH E D V P + H
Sbjct: 63 KFDAVFDNNGRELTDTQPLAEIFQDS-VQHFVYMSSAGVYLKSDQMPHYEEDAVDPKSRH 121
Query: 66 V---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E ++ + + S RP Y+ G N D E WFFDRIVR RP+PIPG+GM T
Sbjct: 122 KGKHETESFLMQQDIPFTSIRPTYIYGPQNYNDLEAWFFDRIVRNRPIPIPGNGMHITQF 181
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDP 179
HV+DL+ + + N +A ++N+ +R VT DG+A+ CA AAG ++IVHYDP
Sbjct: 182 GHVQDLAQTMCRVLGN-SSAVRQVYNVSDNRFVTFDGLARACAVAAGKAPEDIQIVHYDP 240
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
K +KAFP R HF+A A LGW+ +L LK+ FE +++ GR K +
Sbjct: 241 KKFDFGKRKAFPMRVQHFFASVNKAMTELGWQPQYDLISGLKDSFENDFLVSGRSNKEID 300
Query: 239 FEIDDKIL 246
F DD+IL
Sbjct: 301 FSTDDEIL 308
>gi|16330056|ref|NP_440784.1| hypothetical protein slr1540 [Synechocystis sp. PCC 6803]
gi|383321799|ref|YP_005382652.1| hypothetical protein SYNGTI_0890 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324968|ref|YP_005385821.1| hypothetical protein SYNPCCP_0889 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490852|ref|YP_005408528.1| hypothetical protein SYNPCCN_0889 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436119|ref|YP_005650843.1| hypothetical protein SYNGTS_0890 [Synechocystis sp. PCC 6803]
gi|451814215|ref|YP_007450667.1| hypothetical protein MYO_18960 [Synechocystis sp. PCC 6803]
gi|1652543|dbj|BAA17464.1| slr1540 [Synechocystis sp. PCC 6803]
gi|339273151|dbj|BAK49638.1| hypothetical protein SYNGTS_0890 [Synechocystis sp. PCC 6803]
gi|359271118|dbj|BAL28637.1| hypothetical protein SYNGTI_0890 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274288|dbj|BAL31806.1| hypothetical protein SYNPCCN_0889 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277458|dbj|BAL34975.1| hypothetical protein SYNPCCP_0889 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957953|dbj|BAM51193.1| hypothetical protein BEST7613_2262 [Synechocystis sp. PCC 6803]
gi|451780184|gb|AGF51153.1| hypothetical protein MYO_18960 [Synechocystis sp. PCC 6803]
Length = 311
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 145/248 (58%), Gaps = 10/248 (4%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
+F +F N +P+ D V+QF+++SSAG+Y+ + + PH E D V P + H
Sbjct: 63 EFDVIFDNNGRELSDTQPLVDLYNGR-VQQFVYMSSAGVYQASSQMPHRETDAVDPQSRH 121
Query: 66 ---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E+Y++++ W + RP Y+ G N E WFFDR+VR R +PIPG+G T +
Sbjct: 122 KGKFETERYLAQSGIPWTAIRPTYIYGPHNYNALESWFFDRLVRGRAIPIPGNGQYITQL 181
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDP 179
HV DL+ + + P AA I+N+ DR VT++G+A+ CA AAGL V++VHYDP
Sbjct: 182 GHVEDLAIAMAKTIVTP-AAIGQIYNISGDRYVTMNGLAQACATAAGLDPQGVKLVHYDP 240
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
K +KAFP R HF+A+ + A+D L W L E LK F+ +Y+ G+ ++
Sbjct: 241 KDFDFGKRKAFPLRQQHFFADIQKAQDHLDWHPNYGLVEGLKNSFQLDYLPSGKGEEKGD 300
Query: 239 FEIDDKIL 246
F++D++IL
Sbjct: 301 FDLDEQIL 308
>gi|428208069|ref|YP_007092422.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
gi|428009990|gb|AFY88553.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
Length = 309
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 134/222 (60%), Gaps = 8/222 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
V+ F+++SSAG+Y +D+ PHVEGD V P + H + E Y+++ + + RP Y+ G
Sbjct: 89 VQHFVYMSSAGVYLRSDQMPHVEGDPVDPKSRHRGKYETEAYLAQVGLPFTAIRPTYIYG 148
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
+ N D E WFFDRIVR RP+PIP +G+ T + HV DL+ + + N E A ++N+
Sbjct: 149 ASNYNDLESWFFDRIVRDRPIPIPANGLHITQMGHVEDLAQAMARVLGN-ERAIGQVYNV 207
Query: 150 VSDRAVTLDGMAKLCAQAAGLPVE---IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ CA AAG E IVHY+PK +KAFP R HF+A A
Sbjct: 208 SGDRYVTFDGLARACAVAAGKSPEELAIVHYEPKNFDFGKRKAFPLRIQHFFASVNKAIT 267
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKILE 247
L W+ +L LK+ F+ +Y+ GRDK + F +D++IL+
Sbjct: 268 ELNWQPKYDLISGLKDSFQNDYIATGRDKAEVDFSVDEEILK 309
>gi|427724408|ref|YP_007071685.1| NAD-dependent epimerase/dehydratase [Leptolyngbya sp. PCC 7376]
gi|427356128|gb|AFY38851.1| NAD-dependent epimerase/dehydratase [Leptolyngbya sp. PCC 7376]
Length = 309
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 139/247 (56%), Gaps = 10/247 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+F N +P+A+ + +K F+++SSAG+Y P +PP E D V P++ H
Sbjct: 63 FDAVFDNNGRELAHTQPLAEIF-AGKIKHFVYVSSAGVYLPTTQPPLKEADAVDPNSRHK 121
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y++ + W S RP Y+ GS N D E WFFDRIVR RP+PIPG+G T
Sbjct: 122 GKHETEAYLAASDLPWTSIRPTYIYGSKNYNDLEAWFFDRIVRNRPIPIPGNGQFITQFG 181
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPK 180
H DL++ + + N E A I+N+ DR VT G+AK CA+AAG VE+++YDP
Sbjct: 182 HCYDLATAMAAILGN-EKAIGQIYNISGDRFVTFTGLAKACAEAAGKNPDDVELIYYDPT 240
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF-EEYVKIGRDKKAMQF 239
+KAFP R+ HF A+ A L W +L LKE F +Y+ GRDK + F
Sbjct: 241 EFSFGKRKAFPIRSQHFMADISKALKALDWAPKYDLISGLKESFINDYLASGRDKTDIDF 300
Query: 240 EIDDKIL 246
DD+IL
Sbjct: 301 STDDQIL 307
>gi|427717348|ref|YP_007065342.1| NAD-dependent epimerase/dehydratase [Calothrix sp. PCC 7507]
gi|427349784|gb|AFY32508.1| NAD-dependent epimerase/dehydratase [Calothrix sp. PCC 7507]
Length = 312
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 133/224 (59%), Gaps = 8/224 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
V+ F+++SSAG+Y +D+ PHVEGD V P + H + E Y+ + + S RP Y+ G
Sbjct: 90 VQHFVYMSSAGVYLKSDQLPHVEGDPVDPKSRHRGKHETEAYLFSSRLPFTSIRPTYIYG 149
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N + E WFFDRIV RP+PIPG+G+ T + HV+DL++ ++ V N +A I+N+
Sbjct: 150 PLNYNELESWFFDRIVHDRPIPIPGNGLHLTQLGHVKDLAAAMSQIVGNQQAI-GQIYNI 208
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ C QA G ++IVHYDPK +KAFP R HF+A A
Sbjct: 209 SGDRFVTFDGLARACVQATGKSPDAIKIVHYDPKKFDFGKRKAFPMRVQHFFASVHKATT 268
Query: 207 ILGWRSTTNLPEDLKERF-EEYVKIGRDKKAMQFEIDDKILESL 249
L W+ +L L + F +Y+ GRDK + F +D +IL +L
Sbjct: 269 ELSWQPKYDLISGLTDSFTNDYLATGRDKVEVDFSVDAEILAAL 312
>gi|434397935|ref|YP_007131939.1| NAD-dependent epimerase/dehydratase [Stanieria cyanosphaera PCC
7437]
gi|428269032|gb|AFZ34973.1| NAD-dependent epimerase/dehydratase [Stanieria cyanosphaera PCC
7437]
Length = 311
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 145/249 (58%), Gaps = 10/249 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+F N +P+ + K V+ F+++SSAG+Y +++ PH EGD V P++ H
Sbjct: 64 FDAVFDNNGRELSDTQPLVEIFKDR-VQHFVYVSSAGVYLKSEQMPHREGDPVDPNSRHK 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y++++ W S RP Y+ G N D E WFFDRIVR R + IPG+G+ T
Sbjct: 123 GKHETEAYLAQSGIPWTSIRPTYIYGPQNYNDLEAWFFDRIVRNRSILIPGNGLYLTQFG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPK 180
HV DL++ + + N +A I+N+ DR VT +G+A CA+AAG +++VHYDP
Sbjct: 183 HVEDLATAMAAVLGNQQAV-GQIYNISGDRYVTFNGLAYACAEAAGKSADEIQLVHYDPS 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
+KAFP R HF+AE AK L W+ +L LK+ F+ +Y+ GR++ + F
Sbjct: 242 KFNFGKRKAFPMRTQHFFAEINKAKTELNWQPKYDLVSGLKDSFQNDYLASGRERSKIDF 301
Query: 240 EIDDKILES 248
+D++IL +
Sbjct: 302 SVDEEILSA 310
>gi|166367389|ref|YP_001659662.1| NAD-dependent epimerase/dehydratase [Microcystis aeruginosa
NIES-843]
gi|166089762|dbj|BAG04470.1| NAD-dependent epimerase/dehydratase [Microcystis aeruginosa
NIES-843]
Length = 313
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 140/247 (56%), Gaps = 10/247 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F+A+F N +P+ + + + F+++SSAG+Y +D+ PH EGD + P + H
Sbjct: 64 FEAIFDNNGRELSDTQPLVEIFRER-IGHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRHK 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+SE W S RP Y+ G GN D E WFFDR+VR RP+PIPG G FT
Sbjct: 123 GKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQFG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPK 180
HV DL+ + + N +A ++N+ DR VT +G+AK CA A G +EIV+Y+PK
Sbjct: 183 HVVDLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
KK FP R HFYA+ A L W+ +L L + F+ +Y+ GRD++ +
Sbjct: 242 KFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDSFQNDYLPSGRDRQEIDL 301
Query: 240 EIDDKIL 246
IDD+IL
Sbjct: 302 AIDDQIL 308
>gi|428211961|ref|YP_007085105.1| nucleoside-diphosphate-sugar epimerase [Oscillatoria acuminata PCC
6304]
gi|428000342|gb|AFY81185.1| nucleoside-diphosphate-sugar epimerase [Oscillatoria acuminata PCC
6304]
Length = 306
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 142/249 (57%), Gaps = 8/249 (3%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
+F A+F N +P+AD K VK F+++SSAG+Y +D+ PH E D V P + H
Sbjct: 59 QFDAIFDNNGRELSDTKPLADLFKGK-VKHFVYMSSAGVYLKSDQMPHREEDAVDPKSRH 117
Query: 66 V---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
E Y+S+ + S RP Y+ G N E WFFDRIVR RP+PIPG+G T +
Sbjct: 118 KGKNDTEIYLSQQGLPFTSIRPTYIYGPQNYNPLEGWFFDRIVRDRPIPIPGNGFHITQL 177
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKA 181
H DL++ + + N E A I+N+ DR VT DG+A+ CA+AAG V+++HYDPK
Sbjct: 178 GHCYDLANAMAAVLGN-ETAIGQIYNISGDRYVTFDGLARACAEAAGKADVKLIHYDPKQ 236
Query: 182 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFE 240
+KAFP R HF+A+ A L W+ +L LK+ F+ +Y+ G K + F
Sbjct: 237 FDFGKRKAFPMRVQHFFADVSKAMQDLNWQPKFDLVSGLKDSFQNDYLANGSHKAEIDFS 296
Query: 241 IDDKILESL 249
+DD+I+ +
Sbjct: 297 VDDEIINQV 305
>gi|425470091|ref|ZP_18848968.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389880027|emb|CCI39175.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 311
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 131/221 (59%), Gaps = 8/221 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
++ F+++SSAG+Y +D+ PH EGD + P + H + E Y+SE W S RP Y+ G
Sbjct: 89 IQHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYG 148
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
GN D E WFFDR+VR RP+PIPG G FT HV DL+ + + N +A ++N+
Sbjct: 149 PGNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQFGHVVDLAKAMAAVLGNSQAIGQ-VYNI 207
Query: 150 VSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT +G+AK CA A G +EIV+Y+PK KK FP R HFYA+ A
Sbjct: 208 SGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATR 267
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKIL 246
L W+ +L L + F+ +Y+ GRD++ + + IDD+IL
Sbjct: 268 ELNWQPEYDLVSGLADSFQNDYLPSGRDRQEIDWAIDDQIL 308
>gi|428768541|ref|YP_007160331.1| NAD-dependent epimerase/dehydratase [Cyanobacterium aponinum PCC
10605]
gi|428682820|gb|AFZ52287.1| NAD-dependent epimerase/dehydratase [Cyanobacterium aponinum PCC
10605]
Length = 310
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 144/250 (57%), Gaps = 10/250 (4%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
KF A+F N + +P+ + K + F+++SSAG+Y P+++ PH E D V P + H
Sbjct: 63 KFDAIFDNNGRELKDTKPLVELFKDQ-ISHFVYVSSAGVYLPSEQMPHREDDPVDPQSRH 121
Query: 66 ---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E Y+ + S RP Y+ GSGN D E WFFDRI+R +P+ IP G+ FT
Sbjct: 122 KGKYETETYLKAEGVPFTSIRPTYIYGSGNYNDLEAWFFDRILRNQPILIPYHGLHFTQF 181
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDP 179
HV DL++ ++L + N +A I+N+ DR VT G+A CA+A G +EI +YDP
Sbjct: 182 GHVEDLATAMSLVLGNSQAVGQ-IYNISGDRYVTFKGLALACAEAVGKNPEEIEIKYYDP 240
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
++ +KAFP R HF+A+ A+ L W+ +L LKE FE +Y+ GRDK +
Sbjct: 241 AQFNLEKRKAFPIRVQHFFADISKAQKELNWQPKYDLISGLKESFENDYLANGRDKVDVD 300
Query: 239 FEIDDKILES 248
F +D +IL +
Sbjct: 301 FSLDQEILNN 310
>gi|390439289|ref|ZP_10227696.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389837320|emb|CCI31820.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 314
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 140/248 (56%), Gaps = 12/248 (4%)
Query: 8 FKALFRTNNNFRLQRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
F+A+F +NN R R + G + F+++SSAG+Y +D+ PH EGD + P + H
Sbjct: 67 FEAIF--DNNGRELRDTQPLVEIFGDRIGHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRH 124
Query: 66 V---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E Y+SE W S RP Y+ G GN D E WFFDR+VR RP+PIP G FT
Sbjct: 125 KGKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFDRLVRNRPIPIPSHGEHFTQF 184
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDP 179
HV DL+ + + N +A ++N+ DR VT +G+AK CA A G +EIV+Y+P
Sbjct: 185 GHVVDLARAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNP 243
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
K KK FP R HFYA+ A L W+ +L L + F+ +Y+ GRD++ +
Sbjct: 244 KKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDSFQNDYLAAGRDRQEID 303
Query: 239 FEIDDKIL 246
IDD+IL
Sbjct: 304 LAIDDQIL 311
>gi|422304038|ref|ZP_16391387.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389790931|emb|CCI13248.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 311
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 140/247 (56%), Gaps = 10/247 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F+A+F N +P+ + + + F+++SSAG+Y +D+ PH EGD + P + H
Sbjct: 64 FEAIFDNNGRELSDTQPLVEIFRER-IGHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRHK 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+SE W S RP Y+ G GN D E WFFDR+VR RP+PIPG G FT
Sbjct: 123 GKHETENYLSEMGLPWTSIRPVYIYGPGNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQFG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPK 180
HV DL+ + + N +A ++N+ DR VT +G+AK CA A G +EIV+Y+PK
Sbjct: 183 HVVDLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
KK FP R HFYA+ A L W+ +L L + F+ +Y+ GRD++ +
Sbjct: 242 KFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLADSFQNDYLPSGRDRQEIDL 301
Query: 240 EIDDKIL 246
IDD+IL
Sbjct: 302 AIDDQIL 308
>gi|443325612|ref|ZP_21054298.1| nucleoside-diphosphate-sugar epimerase [Xenococcus sp. PCC 7305]
gi|442794771|gb|ELS04172.1| nucleoside-diphosphate-sugar epimerase [Xenococcus sp. PCC 7305]
Length = 312
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 128/222 (57%), Gaps = 8/222 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
V+ F+++SSAG+Y +D+ PH EGD V P + H Q E Y++ + W S RP Y+ G
Sbjct: 89 VQHFVYVSSAGVYLKSDQMPHREGDAVDPKSRHKGKHQTEAYLAASGIPWTSIRPTYIYG 148
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N D E WFFDRIVR+RP+ IPG+G T + H++DL + V N E A I+N+
Sbjct: 149 PQNYNDLEAWFFDRIVRERPILIPGNGKHLTQLGHIQDLVKAMAAVVGN-EKAVGQIYNI 207
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ CA AAG ++I+HYDP +KAFP R HF+A A
Sbjct: 208 SGDRYVTFDGLARACAIAAGKSPEDIKIIHYDPSQFDFGKRKAFPMRVQHFFASVNKAMQ 267
Query: 207 ILGWRSTTNLPEDLKERF-EEYVKIGRDKKAMQFEIDDKILE 247
L W+ +L LK+ +Y+ GRD + F +D +ILE
Sbjct: 268 DLDWQPEYDLVAGLKDSLNHDYLASGRDTAEIDFSLDQQILE 309
>gi|425440472|ref|ZP_18820772.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389719093|emb|CCH97032.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 314
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 130/221 (58%), Gaps = 8/221 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
+ F+++SSAG+Y +D+ PH EGD + P + H + E Y+SE W S RP Y+ G
Sbjct: 92 IGHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYG 151
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
GN D E WFFDR+VR RP+PIPG G FT HV DL+ + + N +A ++N+
Sbjct: 152 PGNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQFGHVVDLARAMAAVLGNSQAIGQ-VYNI 210
Query: 150 VSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT +G+AK CA A G +EIV+Y+PK KK FP R HFYA+ A
Sbjct: 211 SGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATR 270
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKIL 246
L W+ +L L + F+ +Y+ GRD++ + + IDD+IL
Sbjct: 271 ELNWQPEYDLVSGLADSFQNDYLPSGRDRQEIDWAIDDQIL 311
>gi|425454397|ref|ZP_18834140.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389804948|emb|CCI15631.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 311
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 140/248 (56%), Gaps = 12/248 (4%)
Query: 8 FKALFRTNNNFRLQRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
F+A+F +NN R R + G + F+++SSAG+Y +D+ PH EGD + P + H
Sbjct: 64 FEAIF--DNNGRELRDTQPLVEIFGDRIGHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRH 121
Query: 66 V---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E Y+SE W S RP Y+ G N D E WFFDR+VR RP+PIPG G FT
Sbjct: 122 KGKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQF 181
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDP 179
HV DL+ + + N +A ++N+ DR VT +G+AK CA A G +EIV+Y+P
Sbjct: 182 GHVADLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNP 240
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
K KK FP R HFYA+ A L W+ +L L + F+ +Y+ GRD++ +
Sbjct: 241 KKFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDSFQNDYLASGRDRQEID 300
Query: 239 FEIDDKIL 246
IDD+IL
Sbjct: 301 LAIDDQIL 308
>gi|443658986|ref|ZP_21132269.1| hypothetical protein C789_2809 [Microcystis aeruginosa DIANCHI905]
gi|159027807|emb|CAO87020.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332818|gb|ELS47406.1| hypothetical protein C789_2809 [Microcystis aeruginosa DIANCHI905]
Length = 311
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 140/247 (56%), Gaps = 10/247 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F+A+F N +P+ + + ++ F+++SSAG+Y +D+ PH EGD + P + H
Sbjct: 64 FEAIFDNNGRELSDTQPLVEIFRDR-IRHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRHK 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+SE W S RP Y+ G N D E WFFDR+VR RP+PIPG G FT
Sbjct: 123 GKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQFG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPK 180
HV DL+ + + N +A ++N+ DR VT +G+AK CA A G +EIV+Y+PK
Sbjct: 183 HVADLAKAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
KK FP R HFYA+ A L W+ +L L + F+ +Y+ GRD++ +
Sbjct: 242 KFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDSFQNDYLASGRDRQEIDL 301
Query: 240 EIDDKIL 246
IDD+IL
Sbjct: 302 AIDDQIL 308
>gi|384251865|gb|EIE25342.1| NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]
Length = 367
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 137/250 (54%), Gaps = 4/250 (1%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPAD-EPPHVEGDVVKPDAG 64
KF ++ N + +P D K + V ++F++SAG YK EP VEGD K AG
Sbjct: 117 KFDVIYDNNGKDLDTCKPAIDHFKGN-VAHYVFVASAGAYKTNKIEPALVEGDARKEAAG 175
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
HV VE Y+ E + F+P Y+ G KD +F DR++R RPVPIP G+Q T+++H
Sbjct: 176 HVAVENYLVEQDLPYTIFQPLYIYGPYTGKDYMPFFLDRLLRNRPVPIPAPGIQLTSLSH 235
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
V D++S+L V AA +N+ SDR +T DG+ K A AAG+ IVHYDPKA +
Sbjct: 236 VEDVASLLA-KVPGNAAAIGQHYNVASDRYITFDGLVKALADAAGVEANIVHYDPKAVAL 294
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 244
+ FPFR HF A AK LGW T + ED+ E Y G + F DDK
Sbjct: 295 KKGQGFPFRTEHFIASVDKAKRELGWTPTHKILEDVPGLVEAYKSSGLLDADVDFSTDDK 354
Query: 245 ILESLKVPIP 254
ILE++ +P
Sbjct: 355 ILEAVGHKVP 364
>gi|425463625|ref|ZP_18842955.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389830819|emb|CCI26921.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 316
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 129/221 (58%), Gaps = 8/221 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
+ F+++SSAG+Y +D+ PH EGD + P + H + E Y+SE W S RP Y+ G
Sbjct: 92 IGHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVYIYG 151
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
GN D E WFFDR+VR RP+PIPG G FT HV DL+ + + N +A ++N+
Sbjct: 152 PGNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQFGHVVDLAKAMAAVLGNSQAIGQ-VYNI 210
Query: 150 VSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT +G+AK C A G +EIV+Y+PK KK FP R HFYA+ A
Sbjct: 211 SGDRYVTFNGLAKACTAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATR 270
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKIL 246
L W+ +L L + F+ +Y+ GRD++ + + IDD+IL
Sbjct: 271 ELNWQPEYDLVSGLTDSFQNDYLPSGRDRQEIDWAIDDQIL 311
>gi|434391359|ref|YP_007126306.1| NAD-dependent epimerase/dehydratase [Gloeocapsa sp. PCC 7428]
gi|428263200|gb|AFZ29146.1| NAD-dependent epimerase/dehydratase [Gloeocapsa sp. PCC 7428]
Length = 314
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 141/247 (57%), Gaps = 10/247 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F +F N +P+A+ K V+ F+++SSAG+Y P+D+ PH EGD V P + H
Sbjct: 64 FDVIFDNNGRELSDTQPLAEIFKDR-VQHFVYMSSAGVYLPSDQMPHQEGDAVDPKSRHR 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E ++++ + + RP Y+ G N + E WFFDRIVR RP+PIPG+G+ T
Sbjct: 123 GKHETEAFLAQLGIPFTAIRPTYIYGPQNYNELESWFFDRIVRDRPMPIPGNGLHITQFG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPK 180
HV DL+ + + + +A I+N+ DR VT DG+A+ CA AAG +EIVHYDPK
Sbjct: 183 HVDDLAQAMCQVLGSAQAVGE-IYNVSGDRYVTFDGLARACAVAAGKSPEALEIVHYDPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
+KAFP R HF+A AK L W+ +L LK+ F +Y+ GRD + F
Sbjct: 242 KFDFGKRKAFPMRVQHFFAAVDKAKTQLNWQPRYDLISGLKDSFHNDYLASGRDAADVDF 301
Query: 240 EIDDKIL 246
DD+IL
Sbjct: 302 STDDEIL 308
>gi|359460634|ref|ZP_09249197.1| NAD-dependent epimerase/dehydratase family protein [Acaryochloris
sp. CCMEE 5410]
Length = 312
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 147/253 (58%), Gaps = 12/253 (4%)
Query: 5 YAKFKALFRTNNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD 62
+ KF A+F NN +L +P+A K V+ F+++SSAG+Y +++ PH E D P+
Sbjct: 61 HEKFDAIF-DNNGRKLSDTQPLATLFKDQ-VQHFVYMSSAGVYLKSNQMPHREDDPTDPN 118
Query: 63 AGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF 119
+ H+ + E ++ + S RP Y+ G N D E WFFDRIVR+RP+PIPG+G
Sbjct: 119 SRHLGKAESEADLAAQGLPFTSIRPTYIYGPKNYNDVEAWFFDRIVRQRPIPIPGNGQHM 178
Query: 120 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVH 176
T + HV+DL+ + + NP+A I+N+ DR VT DG+AK CA AAG + +VH
Sbjct: 179 TQLGHVQDLAQAMASVLGNPQAI-GQIYNISGDRYVTFDGIAKACALAAGQSPDALRLVH 237
Query: 177 YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKK 235
YDP +KAFP R HF+A+ A LGW +L LK+ F+ +Y+ RD+
Sbjct: 238 YDPAQFDFGKRKAFPMRLQHFFADIHKACTELGWHPQYDLVSGLKDSFQNDYLAGQRDQA 297
Query: 236 AMQFEIDDKILES 248
+ F +DD+IL +
Sbjct: 298 DIDFSLDDQILAA 310
>gi|425437767|ref|ZP_18818182.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389677230|emb|CCH93825.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 311
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 130/224 (58%), Gaps = 8/224 (3%)
Query: 30 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQY 86
S ++ F+++SSAG+Y +D+ PH EGD + P + H + E Y+SE W S RP Y
Sbjct: 86 SDRIEHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRHKGKHETENYLSEMGLPWTSIRPVY 145
Query: 87 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 146
+ G N D E WFFDR+VR RP+PIPG G FT HV DL+ + + N +A +
Sbjct: 146 IYGPRNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQFGHVADLAKAMAAVLGNSQAIGQ-V 204
Query: 147 FNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA 203
+N+ DR VT +G+AK CA A G +EIV+Y+PK KK FP R HFYA+
Sbjct: 205 YNISGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINK 264
Query: 204 AKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKIL 246
A L W+ +L L + F+ +Y+ GRD++ + IDD+IL
Sbjct: 265 ATRELNWQPEYDLVSGLTDSFQNDYLASGRDRQEIDLAIDDQIL 308
>gi|115488340|ref|NP_001066657.1| Os12g0420200 [Oryza sativa Japonica Group]
gi|108862567|gb|ABA97622.2| RNA binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113649164|dbj|BAF29676.1| Os12g0420200 [Oryza sativa Japonica Group]
gi|222616978|gb|EEE53110.1| hypothetical protein OsJ_35887 [Oryza sativa Japonica Group]
Length = 376
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 127/218 (58%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 153 LEQYIYCSSAGVYLKSDLLPHFETDAVDPKSRHKGKLETESLLETRDVNWTSIRPVYIYG 212
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+P+PG+G Q T + HV+DL++ LA+ NP+ AS +FN+
Sbjct: 213 PLNYNPVEEWFFHRLKAGRPIPVPGAGNQITQLGHVKDLATAFVLALGNPK-ASKQVFNI 271
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT DG+A+ CA+A G P EIVHY+PK KKAFPFR+ HF+A A L
Sbjct: 272 SGAKYVTFDGLARACAKAGGFPEPEIVHYNPKDFDFGKKKAFPFRDQHFFASIEKATLEL 331
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW+ +L E L + + G +KA F DD IL
Sbjct: 332 GWKPEYDLVEGLTDSYNLDFGRGTFRKAADFTTDDMIL 369
>gi|388499356|gb|AFK37744.1| unknown [Lotus japonicus]
Length = 377
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 125/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 154 LEQFIYCSSAGVYLKSDLLPHAEVDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYG 213
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIPGSG+Q T + HV+DL+++ + N + AS +FN+
Sbjct: 214 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATVFVQVLGN-DKASKQVFNI 272
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
D+ VT DG+A+ CA+A G P EI+HY+PK KK FPFR+ HF+A AK +L
Sbjct: 273 AGDKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKPFPFRDQHFFASVDKAKSVL 332
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW L E L + + G +K F DD IL
Sbjct: 333 GWEPEFGLVEGLADSYNLDFGRGTFRKEADFSTDDIIL 370
>gi|428773832|ref|YP_007165620.1| NAD-dependent epimerase/dehydratase [Cyanobacterium stanieri PCC
7202]
gi|428688111|gb|AFZ47971.1| NAD-dependent epimerase/dehydratase [Cyanobacterium stanieri PCC
7202]
Length = 314
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 139/253 (54%), Gaps = 10/253 (3%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
KF A+F N +P+ D V F+++SSAG+Y P+ + PH E D + P++ H
Sbjct: 63 KFDAIFDNNGRTLSDTKPLVDLFNGK-VSHFVYVSSAGVYLPSHQMPHREDDPLNPESRH 121
Query: 66 ---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E Y+ E+ + S RP Y+ GSGN D E WFFDR+VR P+PIP G+ T
Sbjct: 122 RGKFETEAYLKESGIPFTSIRPVYIYGSGNYNDLENWFFDRLVRDLPIPIPHHGLYITQF 181
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDP 179
HV DL+ + + N +A I+N+ DR T G+A CA A G ++I +YDP
Sbjct: 182 GHVEDLAVAMAGVLGNSQAIGQ-IYNISGDRYTTFTGLALACASAMGKNPNQIDIRYYDP 240
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
+ +KAFP R HF+ + AK L W+ +L LKE FE +Y+ GRDKK +
Sbjct: 241 NQVDVGNRKAFPIRMQHFFTDITKAKKDLSWQPKYDLISGLKESFENDYLATGRDKKEID 300
Query: 239 FEIDDKILESLKV 251
F +D +I +++K
Sbjct: 301 FSVDQQIFKTMKT 313
>gi|428781551|ref|YP_007173337.1| nucleoside-diphosphate-sugar epimerase [Dactylococcopsis salina PCC
8305]
gi|428695830|gb|AFZ51980.1| nucleoside-diphosphate-sugar epimerase [Dactylococcopsis salina PCC
8305]
Length = 311
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 142/250 (56%), Gaps = 10/250 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+F N +P+ + K ++ F+++SSAG+Y +D+ PH E D + P + H
Sbjct: 64 FDAIFDNNGRELSDTQPLVELFKDK-IQHFVYVSSAGVYLKSDQMPHYEADAIDPKSRHK 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
E Y+SE W S RP Y+ G+GN D E WFFDRIVR R VPIPG G T ++
Sbjct: 123 GKHDTETYLSEMGMPWTSVRPVYIYGAGNYNDLEAWFFDRIVRDRAVPIPGHGEHITQLS 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPK 180
HV+DL+ + + N A ++N+ +R VT +G+A+ CA+A G +++VHY+PK
Sbjct: 183 HVQDLAYAMASILGNKNAI-GQVYNISGERYVTFNGIARACAKAIGKSPDDLKLVHYNPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
KK FP R HF+A+ AK L W+ +L LKE FE +Y+ R + + F
Sbjct: 242 DFDFGKKKPFPLRMQHFFADISKAKTDLQWQPQYDLISGLKESFEKDYLVQNRHEAEIDF 301
Query: 240 EIDDKILESL 249
+DD+IL SL
Sbjct: 302 SVDDEILSSL 311
>gi|425450332|ref|ZP_18830162.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389768887|emb|CCI06125.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 311
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 139/247 (56%), Gaps = 10/247 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F+A+F N +P+ + + + F+++SSAG+Y +D+ PH EGD + P + H
Sbjct: 64 FEAIFDNNGRELSDTQPLVEIFRDR-IGHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRHK 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+SE W S RP Y+ G N D E WFFDR+VR RP+PIPG G FT
Sbjct: 123 GKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQFG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPK 180
HV DL+ + + N +A ++N+ DR VT +G+AK CA A G +EIV+Y+PK
Sbjct: 183 HVADLAQAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
KK FP R HFYA+ A L W+ +L L + F+ +Y+ GRD++ +
Sbjct: 242 KFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDSFQNDYLASGRDRQEIDL 301
Query: 240 EIDDKIL 246
IDD+IL
Sbjct: 302 AIDDQIL 308
>gi|440754856|ref|ZP_20934058.1| hypothetical protein O53_3250 [Microcystis aeruginosa TAIHU98]
gi|440175062|gb|ELP54431.1| hypothetical protein O53_3250 [Microcystis aeruginosa TAIHU98]
Length = 306
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 139/247 (56%), Gaps = 10/247 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F+A+F N +P+ + + + F+++SSAG+Y +D+ PH EGD + P + H
Sbjct: 59 FEAIFDNNGRELSDTQPLVEIFRDR-IGHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRHK 117
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+SE W S RP Y+ G N D E WFFDR+VR RP+PIPG G FT
Sbjct: 118 GKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQFG 177
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPK 180
HV DL+ + + N +A ++N+ DR VT +G+AK CA A G +EIV+Y+PK
Sbjct: 178 HVADLAQAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNPK 236
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
KK FP R HFYA+ A L W+ +L L + F+ +Y+ GRD++ +
Sbjct: 237 KFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDSFQNDYLASGRDRQEIDL 296
Query: 240 EIDDKIL 246
IDD+IL
Sbjct: 297 AIDDQIL 303
>gi|312282041|dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
Length = 379
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 127/218 (58%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 155 LEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYG 214
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+P+P SG+Q + + HV+DL++ LAV E AS IFN+
Sbjct: 215 PLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LAVLGNEKASREIFNI 273
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ +T DG+A+ CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +L
Sbjct: 274 SGEKYITFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL 333
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW+ +L E L + + G +K F DD IL
Sbjct: 334 GWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371
>gi|298491512|ref|YP_003721689.1| NAD-dependent epimerase/dehydratase ['Nostoc azollae' 0708]
gi|298233430|gb|ADI64566.1| NAD-dependent epimerase/dehydratase ['Nostoc azollae' 0708]
Length = 310
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 143/251 (56%), Gaps = 10/251 (3%)
Query: 7 KFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
+F +F N +P+A+ + V+ F+++SSAG+Y +D+ PH+EGD + P + H
Sbjct: 62 EFDVIFDNNGRELADTKPLAEIFQGR-VQHFVYMSSAGVYLKSDQMPHMEGDTLDPKSRH 120
Query: 66 V---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E Y+ + + S RP Y+ G N E WFFDRIVR RP+PI G+GM T +
Sbjct: 121 KGKHETEAYLQQLGIPFTSIRPTYIYGPQNYNPLESWFFDRIVRDRPIPIAGNGMHITQL 180
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDP 179
HV+DL+ +T + N E I+N+ DR VT DG+A+ CA AAG ++IVHYDP
Sbjct: 181 GHVKDLAKAMTQVISN-ETVVRQIYNISGDRFVTFDGLARACAVAAGKSADHIKIVHYDP 239
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQ 238
K +KAFP R HF+A A L W+ +L L++ +Y+ G DK +
Sbjct: 240 KKFDFGKRKAFPMRVQHFFASVNKAMTELNWQPDYDLVSGLQDSLHNDYLVNGADKAEID 299
Query: 239 FEIDDKILESL 249
F +DD+IL+++
Sbjct: 300 FSVDDEILKAV 310
>gi|186683636|ref|YP_001866832.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102]
gi|186466088|gb|ACC81889.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102]
Length = 312
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 135/224 (60%), Gaps = 8/224 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
V+ F+++SSAG+Y +D+ PHVEGD+V P + H + E Y+++ + S RP Y+ G
Sbjct: 90 VQHFVYMSSAGVYLKSDQLPHVEGDLVDPKSRHKGKHETEAYLTQLGLPFTSIRPTYIYG 149
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N + E WFFDRIVR RP+PIPG+G+ T + HV+DL+ +T + N +A I+N+
Sbjct: 150 PRNYNELEGWFFDRIVRDRPIPIPGNGLHITQLGHVKDLAKAMTQILGNKQAI-GQIYNI 208
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ A AAG +IVHYDPK +KAFP R HF+A A+
Sbjct: 209 SGDRFVTFDGLARASAVAAGKSPDATKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAQT 268
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKILESL 249
L W +L L+ E +Y+ +DK + F +D++IL++L
Sbjct: 269 ELNWHPEYDLISGLQNSLENDYLANAKDKADVDFSVDEEILQAL 312
>gi|425460465|ref|ZP_18839946.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389826828|emb|CCI22356.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 311
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 139/247 (56%), Gaps = 10/247 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F+A+F N +P+ + + + F+++SSAG+Y +D+ PH EGD + P + H
Sbjct: 64 FEAIFDNNGRELSDTQPLVEIFRDR-IGHFVYVSSAGVYLKSDQMPHKEGDKLDPKSRHK 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+SE W S RP Y+ G N D E WFFDR+VR RP+PIPG G FT
Sbjct: 123 GKHETENYLSEMGLPWTSIRPVYIYGPRNYNDLEAWFFDRLVRNRPIPIPGHGEHFTQFG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPK 180
HV DL+ + + N +A ++N+ DR VT +G+AK CA A G +EIV+Y+PK
Sbjct: 183 HVADLAQAMAAVLGNSQAIGQ-VYNISGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
KK FP R HFYA+ A L W+ +L L + F+ +Y+ GRD++ +
Sbjct: 242 KFDFGKKKPFPLRVQHFYADINKATRELNWQPEYDLVSGLTDSFQNDYLASGRDQQEIDL 301
Query: 240 EIDDKIL 246
IDD+IL
Sbjct: 302 AIDDQIL 308
>gi|427734696|ref|YP_007054240.1| nucleoside-diphosphate-sugar epimerase [Rivularia sp. PCC 7116]
gi|427369737|gb|AFY53693.1| nucleoside-diphosphate-sugar epimerase [Rivularia sp. PCC 7116]
Length = 312
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 139/237 (58%), Gaps = 13/237 (5%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN--- 78
+P+AD ++ ++ F+++SSAG+Y +D PHVEGD V + H K+ +E+F
Sbjct: 79 QPLADIFQNR-LQHFVYMSSAGVYLKSDSLPHVEGDAVDEKSRHKG--KHHTESFLEVRD 135
Query: 79 --WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
+ S RP Y+ G N D E WFFDRI R RP+PIPG+G+ T + HV+DL+ +T +
Sbjct: 136 FPFTSIRPTYIYGPQNYNDLEAWFFDRITRNRPLPIPGNGLHITQLGHVKDLAKAMTQVI 195
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFR 193
N A I+N+ +R VT DG+A+ CA A G ++IVHYDPK +KAFP R
Sbjct: 196 GNSNAIKQ-IYNVSGNRYVTFDGLARACAVAVGKSADDIQIVHYDPKKFDFGKRKAFPMR 254
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKILESL 249
HF+A A L W +L LK+ F+ +Y+ RDKK + F IDD+IL ++
Sbjct: 255 MQHFFASVNKAITELDWHPDYDLTSGLKDSFKNDYLVSERDKKEIDFSIDDEILNAV 311
>gi|118489564|gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 380
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 125/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 156 LEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYG 215
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + N E AS +FN+
Sbjct: 216 PLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVLGN-EKASQQVFNI 274
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT DG+AK CA+AAG P EIVHY+PK KKAFPFR+ HF+A AK +L
Sbjct: 275 SGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVL 334
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW +L E L + + G +K F DD IL
Sbjct: 335 GWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLIL 372
>gi|15217485|ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana]
gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic; Short=CSP41-b; AltName:
Full=Heteroglycan-interacting protein 1.3; AltName:
Full=Protein CHLOROPLAST RNA BINDING; AltName:
Full=Protein Gb5f; Flags: Precursor
gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340 [Arabidopsis thaliana]
gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6 [Arabidopsis thaliana]
gi|4337177|gb|AAD18098.1| Identical to gb|Y10557 g5bf gene from Arabidopsis thaliana. ESTs
gb|R30578, gb|R90475, gb|T22384, gb|T22425, gb|N64934
and gb|T46767 come from this gene [Arabidopsis thaliana]
gi|14334754|gb|AAK59555.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|17979099|gb|AAL47493.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332190310|gb|AEE28431.1| RNA binding protein [Arabidopsis thaliana]
Length = 378
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 126/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 155 LEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYG 214
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+
Sbjct: 215 PLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNI 273
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT DG+AK CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +L
Sbjct: 274 SGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL 333
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW+ +L E L + + G +K F DD IL
Sbjct: 334 GWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371
>gi|255542956|ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
gi|223548502|gb|EEF49993.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
Length = 381
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 125/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E + + NW S RP Y+ G
Sbjct: 157 LEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESSGVNWTSIRPVYIYG 216
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + N E AS +FN+
Sbjct: 217 PLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAFIQVLGN-EKASKQVFNI 275
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT DG+A+ CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +L
Sbjct: 276 SGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVDKAKHVL 335
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW +L E L + + G +K F DD IL
Sbjct: 336 GWEPEFDLVEGLADSYNLDFGRGTFRKEADFTTDDMIL 373
>gi|3850621|emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 374
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 126/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 151 LEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYG 210
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+
Sbjct: 211 PLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNI 269
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT DG+AK CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +L
Sbjct: 270 SGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL 329
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW+ +L E L + + G +K F DD IL
Sbjct: 330 GWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 367
>gi|282899647|ref|ZP_06307611.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis
raciborskii CS-505]
gi|281195526|gb|EFA70459.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis
raciborskii CS-505]
Length = 307
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 131/221 (59%), Gaps = 8/221 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
VK F+++SSAG+Y +D+ PHVEGD V P + H + E ++ + + S RP Y+ G
Sbjct: 87 VKHFVYMSSAGVYLKSDQLPHVEGDTVDPKSRHRGKHETESFLQQLGIAFTSIRPTYIYG 146
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N E WFFDRIVR RP+PIPG+G+ T + HV+DL+ + + N + A I+N+
Sbjct: 147 PKNYNPLESWFFDRIVRDRPIPIPGNGLHITQLGHVQDLAQAMLQVIGN-QTAIGKIYNV 205
Query: 150 VSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ CA AAG V+IVHYDPK +KAFP R HF+A A
Sbjct: 206 SGDRFVTFDGLARACAIAAGKSADSVKIVHYDPKKFDFGKRKAFPMRAQHFFASVNRAIT 265
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKIL 246
L W+ +L L++ F+ +Y+ G + + F +DD+IL
Sbjct: 266 ELNWQPQYDLISGLQDSFQNDYLTGGAAQGEIDFSVDDEIL 306
>gi|282898032|ref|ZP_06306027.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii
D9]
gi|281197176|gb|EFA72077.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii
D9]
Length = 314
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 131/221 (59%), Gaps = 8/221 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
VK F+++SSAG+Y +D+ PHVEGD + P + H + E ++ + + S RP Y+ G
Sbjct: 87 VKHFIYMSSAGVYLKSDQLPHVEGDTIDPKSRHRGKHETESFLQQLGIPFTSIRPTYIYG 146
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N E WFFDRIVR RP+PIPG+G+ T + HV+DL+ + + N + A I+N+
Sbjct: 147 PKNYNPLESWFFDRIVRDRPIPIPGNGLHITQLGHVQDLAQAMLQVIGN-QTAVGKIYNV 205
Query: 150 VSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ CA AAG V+IVHYDPK +KAFP R HF+A A
Sbjct: 206 SGDRFVTFDGLARACAIAAGKSGESVKIVHYDPKKFDFGKRKAFPMRAQHFFASVNRAIT 265
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKIL 246
L W+ +L L++ F+ +Y+ G + + F +DD+IL
Sbjct: 266 ELNWQPQYDLISGLQDSFQNDYLTSGAAQGEIDFSVDDEIL 306
>gi|443313431|ref|ZP_21043042.1| nucleoside-diphosphate-sugar epimerase [Synechocystis sp. PCC 7509]
gi|442776374|gb|ELR86656.1| nucleoside-diphosphate-sugar epimerase [Synechocystis sp. PCC 7509]
Length = 312
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 142/247 (57%), Gaps = 10/247 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+F N +PVA+ + V+ F+++SSAG+Y PA E PH EGD V P + H
Sbjct: 64 FDAIFDNNGRELADTQPVAELF-AHKVQHFIYMSSAGVYLPAMELPHGEGDAVDPKSRHK 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+++ + S RP Y+ G N E WFFDR++R RP+PIPGSG+ T +
Sbjct: 123 GKHETEAYLTKLGIPFTSIRPTYIYGPQNYNQLESWFFDRLIRDRPIPIPGSGVHLTQLG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPK 180
HV DL++ + V + A I+N+ DR VT D +A+ CA A G V+IVHY+PK
Sbjct: 183 HVEDLAAAMA-QVLGCKRAIGQIYNVSGDRYVTFDNLARACAVAMGKSPENVKIVHYEPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
+ +KAFPFR HF+A A L W+ +L LK+ F +Y+ G+DK + F
Sbjct: 242 SFDFGKRKAFPFRLQHFFASTAKATSELNWQPKYDLISGLKDSFHNDYLATGKDKLDVDF 301
Query: 240 EIDDKIL 246
+D++I+
Sbjct: 302 NVDEQII 308
>gi|388520007|gb|AFK48065.1| unknown [Lotus japonicus]
Length = 377
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 124/218 (56%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 154 LEQFIYCSSAGVYLKSDLLPHAEVDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYG 213
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIPGSG+Q T + HV+DL+++ + N + AS +FN+
Sbjct: 214 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATVFVQVLGN-DKASKQVFNI 272
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
D+ VT DG+A+ CA+A G P EI+HY+PK KK FPFR+ HF+A AK +L
Sbjct: 273 AGDKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKPFPFRDQHFFASVDKAKSVL 332
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW E L + + G +K F DD IL
Sbjct: 333 GWEPEFGFVEGLADSYNLDFGRGTFRKEADFSTDDIIL 370
>gi|356572914|ref|XP_003554610.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like
[Glycine max]
Length = 378
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 124/218 (56%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 155 LEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLETESLLQARGVNWTSIRPVYIYG 214
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIP SG+Q T + HV+DL++ + N E AS +FN+
Sbjct: 215 PLNYNPVEEWFFHRLKAGRPIPIPSSGLQITQLGHVKDLATAFIQVLGN-EKASKEVFNI 273
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT DG+A+ CA+A G P EI+HY+PK KK+FPFR+ HF+A AK +L
Sbjct: 274 SGEKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKSFPFRDQHFFASIEKAKRVL 333
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW L E L + + G +K F DD IL
Sbjct: 334 GWEPEFGLVEGLADSYNLDFGRGTYRKEADFSTDDIIL 371
>gi|388497252|gb|AFK36692.1| unknown [Medicago truncatula]
Length = 378
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 124/218 (56%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 155 LEQFIYCSSAGVYLKSDLLPHAEIDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYG 214
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIPGSG+Q T + HV+DL++ L V E AS IFN+
Sbjct: 215 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATAF-LKVLGNEKASKQIFNI 273
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
D+ VT DG+A+ CA+A G P EI+HY+PK KK+FPFR+ HF+A AK +L
Sbjct: 274 SGDKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVL 333
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
G L E L + + G +K F DD IL
Sbjct: 334 GLEPDYGLVEGLTDSYNLDFGRGTFRKEADFSTDDIIL 371
>gi|224124986|ref|XP_002319474.1| predicted protein [Populus trichocarpa]
gi|222857850|gb|EEE95397.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 125/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 156 LEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYG 215
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + N E AS +FN+
Sbjct: 216 PLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVLGN-EKASQQVFNI 274
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT DG+AK CA+AAG P EIVHY+PK KKAFPFR+ HF+A AK +L
Sbjct: 275 SGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVL 334
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW +L E L + + G +K F DD I+
Sbjct: 335 GWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLII 372
>gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]
Length = 380
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 125/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 156 LEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYG 215
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + N E AS +FN+
Sbjct: 216 PLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVLGN-EKASQQVFNI 274
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT DG+AK CA+AAG P EIVHY+PK KKAFPFR+ HF+A AK +L
Sbjct: 275 SGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVL 334
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW +L E L + + G +K F DD I+
Sbjct: 335 GWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLII 372
>gi|376004433|ref|ZP_09782136.1| putative UDP-glucose 4-epimerase [Arthrospira sp. PCC 8005]
gi|375327198|emb|CCE17889.1| putative UDP-glucose 4-epimerase [Arthrospira sp. PCC 8005]
Length = 311
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 140/248 (56%), Gaps = 9/248 (3%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F +F N +P+AD VK F+++SSAG+Y +D+ PH+EGD P + H+
Sbjct: 64 FDVIFDNNGRQLSDTQPLADLFNGQ-VKHFVYMSSAGVYLKSDQMPHIEGDPTDPKSRHL 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+ + W S RP Y+ G N E WFFDRIV KRP+PIPG+GM T +
Sbjct: 123 GKYETETYLQKVGIPWTSIRPTYIYGPQNYNPLESWFFDRIVAKRPIPIPGNGMHITQLG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPK 180
HV DL++ + +AV + A ++N+ DR VT DG+AK CA AAG ++++HYDPK
Sbjct: 183 HVEDLANAM-VAVLGNQTAIGQVYNISGDRFVTFDGLAKACAIAAGESPDDLQLIHYDPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFE 240
+KAFP R HF+A+ A + L W+ +L LK+ + ++ + F
Sbjct: 242 NFDFGKRKAFPLRVQHFFADVHKAINQLNWQPKYDLISGLKDSCQNDYLANSNQGEVDFS 301
Query: 241 IDDKILES 248
DD+I+++
Sbjct: 302 TDDEIIKA 309
>gi|254422655|ref|ZP_05036373.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Synechococcus
sp. PCC 7335]
gi|196190144|gb|EDX85108.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Synechococcus
sp. PCC 7335]
Length = 309
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 143/247 (57%), Gaps = 10/247 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH- 65
F A+F N +P+AD K +K +++SSAG+Y +D+ PHVEGD V P++ H
Sbjct: 64 FDAIFDNNGRELAHTKPLADLFKGK-LKHLVYVSSAGVYAKSDQMPHVEGDRVDPNSRHK 122
Query: 66 --VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
E Y+ E + + RP Y+ G N E+WFFDR+VR RP+PIPGSGM T++
Sbjct: 123 GKFHTEDYLREQGIPFTAIRPVYIYGPQNYNPLEKWFFDRLVRDRPIPIPGSGMALTHLG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPK 180
H +DL++ + + N + A I+N+ D+AVT DG+A+ CA A V+IVHY+PK
Sbjct: 183 HCQDLAAAMVSVLGN-DNAVGEIYNISGDKAVTFDGLARACAIAMEKDPDAVKIVHYNPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
KKAFP R HF+ + AK L W+ +L + LK+ +E +Y+ K + F
Sbjct: 242 DFDFGKKKAFPMRVQHFFTDISKAKAELDWQPQFSLIDGLKDSYENDYLANNLHKAEIDF 301
Query: 240 EIDDKIL 246
+DD+IL
Sbjct: 302 SLDDQIL 308
>gi|297843724|ref|XP_002889743.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335585|gb|EFH66002.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 125/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 155 LEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYG 214
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+P+P SG+Q + + HV+DL + L V E AS IFN+
Sbjct: 215 PLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLGTAF-LNVLGNEKASREIFNI 273
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT DG+AK CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +L
Sbjct: 274 SGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL 333
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW+ +L E L + + G +K F DD +L
Sbjct: 334 GWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMVL 371
>gi|158337073|ref|YP_001518248.1| NAD-dependent epimerase/dehydratase family protein [Acaryochloris
marina MBIC11017]
gi|158307314|gb|ABW28931.1| NAD-dependent epimerase/dehydratase family protein [Acaryochloris
marina MBIC11017]
Length = 312
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 146/253 (57%), Gaps = 12/253 (4%)
Query: 5 YAKFKALFRTNNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD 62
+ KF A+F NN +L +P+A K V+ F+++SSAG+Y +++ PH E D P+
Sbjct: 61 HEKFDAIF-DNNGRKLSDTQPLATLFKDQ-VQHFVYMSSAGVYLKSNQMPHREDDPTDPN 118
Query: 63 AGHV---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF 119
+ H+ + E ++ + S RP Y+ G N D E WFFDRIVR+RP+PIPG+G
Sbjct: 119 SRHLGKAESEADLAAQGLPFTSIRPTYIYGPKNYNDVEAWFFDRIVRQRPIPIPGNGQHM 178
Query: 120 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVH 176
T + HV+DL+ + + NP+A I+N+ DR VT DG+AK CA AAG + +VH
Sbjct: 179 TQLGHVQDLAQAMASVLGNPQAI-GQIYNISGDRYVTFDGIAKACALAAGQSSDALRLVH 237
Query: 177 YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKK 235
YDP +KAFP R HF+A+ A L W +L LK+ F+ +Y+ RD+
Sbjct: 238 YDPAQFDFGKRKAFPMRLQHFFADIHKACTDLDWHPQYDLVSGLKDSFQNDYLAGQRDQA 297
Query: 236 AMQFEIDDKILES 248
+ F +DD+IL +
Sbjct: 298 DIDFSLDDQILAA 310
>gi|2765081|emb|CAA71589.1| g5bf [Arabidopsis thaliana]
Length = 378
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 125/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 155 LEQYIYCSSAGVYLKFDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYG 214
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+
Sbjct: 215 PLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNI 273
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT DG+AK CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +L
Sbjct: 274 SGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL 333
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW+ +L E L + + G +K F DD IL
Sbjct: 334 GWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371
>gi|414076098|ref|YP_006995416.1| NAD-dependent epimerase/dehydratase [Anabaena sp. 90]
gi|413969514|gb|AFW93603.1| NAD-dependent epimerase/dehydratase [Anabaena sp. 90]
Length = 310
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 132/223 (59%), Gaps = 8/223 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
VK F+++SSAG+Y +D+ PH+EGD V P + H + E Y+ + + S RP Y+ G
Sbjct: 88 VKHFVYMSSAGVYLKSDQMPHLEGDAVDPKSRHQGKHETEAYLKQLGIPFTSIRPTYIYG 147
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N E WFFDRIVR RP+ IPG+GM T + HV DL+ +T + N +A I+N+
Sbjct: 148 PQNYNPLESWFFDRIVRDRPICIPGNGMHITQLGHVWDLAQAMTQIIGNDQAIGQ-IYNI 206
Query: 150 VSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT DG+A+ CA AAG V+IVHYDPK +KAFP R HF+A A+
Sbjct: 207 SGDRFVTFDGLARACAVAAGKSADDVKIVHYDPKKFDFGKRKAFPMRVQHFFASVNKAQI 266
Query: 207 ILGWRSTTNLPEDLKERF-EEYVKIGRDKKAMQFEIDDKILES 248
L W+ +L L+ +Y+ G+DK + F +DD+IL++
Sbjct: 267 ELNWQPKYDLISGLQNSLVNDYLINGQDKLEVDFSVDDEILKA 309
>gi|209523545|ref|ZP_03272099.1| NAD-dependent epimerase/dehydratase [Arthrospira maxima CS-328]
gi|209495950|gb|EDZ96251.1| NAD-dependent epimerase/dehydratase [Arthrospira maxima CS-328]
Length = 311
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 139/248 (56%), Gaps = 9/248 (3%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F +F N +P+AD VK F+++SSAG+Y +D+ PH+EGD P + H+
Sbjct: 64 FDVIFDNNGRQLSDTQPLADLFNGQ-VKHFVYMSSAGVYLKSDQMPHIEGDPTDPKSRHL 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+ + W S RP Y+ G N E WFFDRIV KRP+PIPG+GM T +
Sbjct: 123 GKYETETYLQKVGIPWTSIRPTYIYGPQNYNPLESWFFDRIVAKRPIPIPGNGMHITQLG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPK 180
HV DL++ + +AV A ++N+ DR VT DG+AK CA AAG ++++HYDPK
Sbjct: 183 HVEDLANAM-VAVLGNSTAIGQVYNISGDRFVTFDGLAKACAIAAGQSPDDLQLIHYDPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFE 240
+KAFP R HF+A+ A + L W+ +L LK+ + ++ + F
Sbjct: 242 NFDFGKRKAFPLRVQHFFADVHKAINQLNWQPKYDLISGLKDSCQNDYLANSNQGEVDFS 301
Query: 241 IDDKILES 248
DD+I+++
Sbjct: 302 TDDEIIKA 309
>gi|17064988|gb|AAL32648.1| g5bf protein [Arabidopsis thaliana]
Length = 378
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 126/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 155 LEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYG 214
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N E+WFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+
Sbjct: 215 PLNYNPVEKWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNI 273
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT DG+AK CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +L
Sbjct: 274 SGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL 333
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW+ +L E L + + G +K F DD IL
Sbjct: 334 GWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371
>gi|423065819|ref|ZP_17054609.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis C1]
gi|406712577|gb|EKD07761.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis C1]
Length = 314
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 139/248 (56%), Gaps = 9/248 (3%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F +F N +P+AD VK F+++SSAG+Y +D+ PH+EGD P + H+
Sbjct: 67 FDVIFDNNGRQLSDTQPLADLFNGQ-VKHFVYMSSAGVYLKSDQMPHIEGDPTDPKSRHL 125
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+ + W S RP Y+ G N E WFFDRIV KRP+PIPG+GM T +
Sbjct: 126 GKYETETYLQKVGIPWTSIRPTYIYGPQNYNPLEAWFFDRIVAKRPIPIPGNGMHITQLG 185
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPK 180
HV DL++ + +AV A ++N+ DR VT DG+AK CA AAG ++++HYDPK
Sbjct: 186 HVEDLANAM-VAVLGNSTAIGQVYNISGDRFVTFDGLAKACAIAAGQSPDDLQLIHYDPK 244
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFE 240
+KAFP R HF+A+ A + L W+ +L LK+ + ++ + F
Sbjct: 245 NFDFGKRKAFPLRVQHFFADVHKAINQLNWQPKYDLISGLKDSCQNDYLANSNQGEVDFS 304
Query: 241 IDDKILES 248
DD+I+++
Sbjct: 305 TDDEIIKA 312
>gi|428774896|ref|YP_007166683.1| NAD-dependent epimerase/dehydratase [Halothece sp. PCC 7418]
gi|428689175|gb|AFZ42469.1| NAD-dependent epimerase/dehydratase [Halothece sp. PCC 7418]
Length = 311
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 142/250 (56%), Gaps = 10/250 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+F N +P+ + K ++ F+++SSAG+Y +D+ PH E D + P + H
Sbjct: 64 FDAIFDNNGRELSDTQPLIELFKDQ-IQHFVYVSSAGVYLKSDQMPHYEADAIDPKSRHK 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
E Y+SE W S RP Y+ G+GN D E WFFDRI+R R +PIPG G T +
Sbjct: 123 GKHDTETYLSEMGVPWTSVRPVYIYGAGNYNDLEAWFFDRILRDRAIPIPGHGEHITQLG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPK 180
HV+DL+ + + N +A + ++N+ +R VT +G+A+ CA+A G +++VHY+PK
Sbjct: 183 HVQDLAHAMASILGNKKAL-AQVYNISGERYVTFNGIARACAKAVGKSPEDLKLVHYNPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
KK FP R HF+A+ AK L W+ +L LKE FE +Y+ R + + F
Sbjct: 242 DFDFGKKKPFPLRMQHFFADISKAKTDLDWQPQYDLISGLKESFEKDYLASNRHEADIDF 301
Query: 240 EIDDKILESL 249
+DD+IL +
Sbjct: 302 SLDDQILSAF 311
>gi|21593201|gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 378
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 125/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 155 LEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYG 214
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+P+P SG+Q + + HV+DL++ L V E AS IFN+
Sbjct: 215 PLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNI 273
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT DG+A CA+A G P EIVHY+PK KKAFPFR+ HF+A AK +L
Sbjct: 274 SGEKYVTFDGLAXACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL 333
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW+ +L E L + + G +K F DD IL
Sbjct: 334 GWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371
>gi|452822421|gb|EME29440.1| mRNA binding / poly(U) binding protein [Galdieria sulphuraria]
Length = 383
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 138/230 (60%), Gaps = 4/230 (1%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-SENFSNWA 80
+P+ + A GV+ +LF+SSAGIYK ++ PH E D V DA Q E+++ S+
Sbjct: 151 KPLVELASQIGVRHYLFVSSAGIYKASEMTPHFENDPVNSDAAISQTERFLLSQTSFAVT 210
Query: 81 SFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
FRP Y+IG + K ++FFDRI+R VPIP G Q +++HV DL M+ L+++
Sbjct: 211 CFRPIYLIGLKSAKTSYTDYFFDRIIRGLKVPIPYPGDQLVSLSHVDDLVQMIILSIDKS 270
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
+A IFN S + +T+ +A+LC+Q P++ +YD A ++ FPFRN HF A
Sbjct: 271 DAFQ-EIFNATSGKFITVRALAELCSQVCCKPLQTFYYDAGLAS-NSFSRFPFRNRHFIA 328
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 249
+PR A+ +LGW S TNL E++ + F EY+ + +DK+ + D K+ E +
Sbjct: 329 DPRKAEQLLGWSSHTNLEENIAQMFSEYLSLQKDKQNFPLDEDHKLWEVM 378
>gi|363806740|ref|NP_001242018.1| uncharacterized protein LOC100791076 [Glycine max]
gi|255647108|gb|ACU24022.1| unknown [Glycine max]
Length = 378
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 122/218 (55%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 155 LEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLETESLLQAKGVNWTSIRPVYIYG 214
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIPGSG+Q T + HV+DL+ N E AS +FN+
Sbjct: 215 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLAKAFIQVFGN-EKASKEVFNI 273
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
D+ VT DG+A+ CA+A G P EI+HY+PK KK+FPFR+ HF+A AK +L
Sbjct: 274 SGDKHVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVL 333
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
G L E L + + G +K F DD IL
Sbjct: 334 GLEPEFGLVEGLADSYNLDFGRGTYRKEADFSTDDIIL 371
>gi|212722236|ref|NP_001131905.1| uncharacterized protein LOC100193292 [Zea mays]
gi|194692874|gb|ACF80521.1| unknown [Zea mays]
gi|413941839|gb|AFW74488.1| hypothetical protein ZEAMMB73_436145 [Zea mays]
gi|413954163|gb|AFW86812.1| hypothetical protein ZEAMMB73_149219 [Zea mays]
Length = 374
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 124/219 (56%), Gaps = 5/219 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H ++ E ++ NW S RP Y+ G
Sbjct: 151 LQQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLTSRGVNWTSIRPVYIYG 210
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIPG+G Q T + HV+DL+ L + NP+ AS IFN+
Sbjct: 211 PLNYNPVEEWFFHRLKAGRPIPIPGAGNQITQLGHVKDLARAFNLVLGNPK-ASKQIFNI 269
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT DG+A+ CA+A G P E+VHY+PK KKAFPFR+ HF+A A L
Sbjct: 270 SGAKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKATSEL 329
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILE 247
GW +L + L + G +K F DD IL+
Sbjct: 330 GWTPEFDLVQGLTNSYNLDFGRGTFRKEADFTTDDMILD 368
>gi|449457309|ref|XP_004146391.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Cucumis sativus]
gi|449480815|ref|XP_004156003.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Cucumis sativus]
Length = 383
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 126/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E ++ NW S RP Y+ G
Sbjct: 159 LEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKDVNWTSIRPVYIYG 218
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIP SG+Q T + HV+DL++ + N + AS +FN+
Sbjct: 219 PLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFVQVLGN-DKASQQVFNI 277
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ V+ DG+AK CA+A G P EIVHY+PK KK FPFR+ HF+A AK +L
Sbjct: 278 SGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASIEKAKSVL 337
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW+ +L E L + + G +K F DD IL
Sbjct: 338 GWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIIL 375
>gi|242085078|ref|XP_002442964.1| hypothetical protein SORBIDRAFT_08g005500 [Sorghum bicolor]
gi|241943657|gb|EES16802.1| hypothetical protein SORBIDRAFT_08g005500 [Sorghum bicolor]
Length = 384
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 125/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H ++ E ++ NW S RP Y+ G
Sbjct: 157 LEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLTSRGVNWTSIRPVYIYG 216
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIPG+G Q T + HV+DL+ L + NP+ AS IFN+
Sbjct: 217 PLNYNPVEEWFFHRLKAGRPIPIPGAGNQITQLGHVKDLARAFNLVLGNPK-ASQQIFNI 275
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT DG+A+ CA+A G P E+VHY+PK KKAFPFR+ HF+A A L
Sbjct: 276 SGAKYVTFDGLARACAKAGGFPEPELVHYNPKDFDFGKKKAFPFRDQHFFASVEKAISEL 335
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW +L + L + + G +KA F DD IL
Sbjct: 336 GWTPEFDLVDGLTDSYNLDFGRGTFRKAADFTTDDIIL 373
>gi|413941841|gb|AFW74490.1| hypothetical protein ZEAMMB73_436145 [Zea mays]
gi|413954161|gb|AFW86810.1| hypothetical protein ZEAMMB73_149219 [Zea mays]
Length = 320
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 124/219 (56%), Gaps = 5/219 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H ++ E ++ NW S RP Y+ G
Sbjct: 97 LQQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLTSRGVNWTSIRPVYIYG 156
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIPG+G Q T + HV+DL+ L + NP+ AS IFN+
Sbjct: 157 PLNYNPVEEWFFHRLKAGRPIPIPGAGNQITQLGHVKDLARAFNLVLGNPK-ASKQIFNI 215
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT DG+A+ CA+A G P E+VHY+PK KKAFPFR+ HF+A A L
Sbjct: 216 SGAKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKATSEL 275
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILE 247
GW +L + L + G +K F DD IL+
Sbjct: 276 GWTPEFDLVQGLTNSYNLDFGRGTFRKEADFTTDDMILD 314
>gi|168024677|ref|XP_001764862.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683898|gb|EDQ70304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 124/228 (54%), Gaps = 5/228 (2%)
Query: 32 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDA---GHVQVEKYISENFSNWASFRPQYMI 88
G++Q++F SSAG+Y +D+ PH E D V P + G + E + W S RP Y+
Sbjct: 192 GLEQYIFCSSAGVYLKSDQLPHFEVDAVDPKSRHKGKLDTETLLQSKGVAWTSIRPVYIY 251
Query: 89 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 148
G N EEWFF R+ RP+P+P SGMQ T + HV+DL+ L + N E A I+N
Sbjct: 252 GPLNYNPVEEWFFQRLKEGRPIPVPNSGMQITQLGHVKDLARAFVLVLAN-EKAYGQIYN 310
Query: 149 LVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 207
+ + VT DG+AK CA A G P +IVHY+PK KKAFP R+ HF+ A+
Sbjct: 311 ISGAKYVTFDGIAKACALAGGFPEPQIVHYNPKDFDFGKKKAFPLRDQHFFTSVEKAEKE 370
Query: 208 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 255
LG+ L E LK+ + G +KA F DD ILE L + V
Sbjct: 371 LGFTPEFGLVEGLKDSYSLDFGRGTFRKAADFSTDDMILEKLGIKTTV 418
>gi|56752277|ref|YP_172978.1| mRNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81300635|ref|YP_400843.1| mRNA-binding protein [Synechococcus elongatus PCC 7942]
gi|56687236|dbj|BAD80458.1| mRNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81169516|gb|ABB57856.1| mRNA-binding protein [Synechococcus elongatus PCC 7942]
Length = 313
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 134/224 (59%), Gaps = 8/224 (3%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGS 90
+Q +++SSAG+Y +D+ P E D V P + H + E ++ + + +FRP Y+ G
Sbjct: 88 QQLIYVSSAGVYAASDQLPLRESDPVDPQSRHRGKFETENWLQQQGLPFTAFRPVYIYGP 147
Query: 91 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 150
GN E+WFFDRI+R RP+PIPG+G+ T + HV DL++ + AV+NP A I+NL
Sbjct: 148 GNYNPLEQWFFDRILRDRPLPIPGTGLHLTQLGHVEDLATAMVAAVKNPRAI-GQIYNLS 206
Query: 151 SDRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 207
DR V+ DG+A+ CA AAG + +VHYDPK + +KAFP R HF A+
Sbjct: 207 GDRYVSFDGLARACAIAAGRDPQALHLVHYDPKQLNLGKRKAFPMRAQHFITAIDQARQD 266
Query: 208 LGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKILESLK 250
L W +L + L+ + +Y+ G D++A+ F +D++IL ++
Sbjct: 267 LEWVPRFSLIDGLQNSLQNDYLARGLDQQAVDFSLDEEILAAVS 310
>gi|425447101|ref|ZP_18827093.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389732385|emb|CCI03640.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 311
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 127/221 (57%), Gaps = 8/221 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
++ F+++SSAG+Y +D+ PH EGD + + H + E Y+SE W S RP Y+ G
Sbjct: 89 IQHFVYVSSAGVYLKSDQMPHKEGDKLDTKSRHKGKHETENYLSEMGLPWTSIRPVYIYG 148
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N D E WFFDR+VR RP+PIP G FT HV DL+ + + N +A ++N+
Sbjct: 149 PRNYNDLEAWFFDRLVRNRPIPIPSHGEHFTQFGHVADLAKAMAAVLGNSQAIGQ-VYNI 207
Query: 150 VSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DR VT +G+AK CA A G +EIV+Y+PK KK FP R HFYA+ A
Sbjct: 208 SGDRYVTFNGLAKACAAAMGKNAEEIEIVNYNPKKFDFGKKKPFPLRVQHFYADINKATR 267
Query: 207 ILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKIL 246
L W+ +L L + F+ +Y+ GRD++ + IDD+IL
Sbjct: 268 ELNWQPEYDLVSGLTDSFQNDYLASGRDRQEIDLAIDDQIL 308
>gi|254413469|ref|ZP_05027239.1| 3-beta hydroxysteroid dehydrogenase/isomerase family
[Coleofasciculus chthonoplastes PCC 7420]
gi|196179576|gb|EDX74570.1| 3-beta hydroxysteroid dehydrogenase/isomerase family
[Coleofasciculus chthonoplastes PCC 7420]
Length = 311
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 140/247 (56%), Gaps = 10/247 (4%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+F N +P+ + K V+ F+++SSAG+Y +D+ PHVEGD V P + H
Sbjct: 64 FDAIFDNNGRELSDTQPLVEIFKDK-VQHFVYMSSAGVYLQSDQMPHVEGDPVDPKSRHK 122
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E Y+ + + RP Y+ G N D E WFFDRIVR RP+ IP SG+ T +
Sbjct: 123 GKHETEAYLQAQGIPFTAIRPTYIYGPQNYNDLEAWFFDRIVRDRPLLIPSSGLYITQLG 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE---IVHYDPK 180
H +DL+ ++L + N +A ++N+ DR VT DG+A C AAG E ++HY+PK
Sbjct: 183 HCKDLARAMSLVLGNQQAI-GQVYNVSGDRYVTFDGLANACIVAAGKSPEDFDLLHYNPK 241
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQF 239
+KAFP R HF+A+ + AK L W +L LK+ F+ +Y+ GR + + F
Sbjct: 242 KFDFGKRKAFPLRTQHFFADVQKAKTQLKWEPEYDLISGLKDSFQNDYLASGRHEAEVDF 301
Query: 240 EIDDKIL 246
+DD+IL
Sbjct: 302 SLDDQIL 308
>gi|388512335|gb|AFK44229.1| unknown [Medicago truncatula]
Length = 378
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 122/218 (55%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 155 LEQFIYCSSAGVYLKSDLLPHAEIDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYG 214
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIPGSG+Q T + HV+DL++ L V E AS IFN+
Sbjct: 215 PLNYNPVEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATAF-LKVLGNEKASKQIFNI 273
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
D+ VT DG+A+ C +A G P EI+HY+PK KK+FPFR+ HF+A AK +L
Sbjct: 274 SGDKYVTFDGLARACVKAGGFPEPEIIHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVL 333
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
G L E + + G +K F DD IL
Sbjct: 334 GLEPDYGLVEGFTDSYNLGFGRGTFRKEGDFSTDDIIL 371
>gi|302801426|ref|XP_002982469.1| hypothetical protein SELMODRAFT_228849 [Selaginella moellendorffii]
gi|300149568|gb|EFJ16222.1| hypothetical protein SELMODRAFT_228849 [Selaginella moellendorffii]
Length = 371
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 129/227 (56%), Gaps = 5/227 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H + E + + W S RP Y+ G
Sbjct: 146 LQQYIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLDTESLLQDKGVTWTSIRPVYIYG 205
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+P+PGSG+Q T + HV+DL+ ++NP+A + +FN+
Sbjct: 206 PLNYNPVEEWFFHRLKAGRPIPVPGSGLQITQLGHVKDLADAFVKVMDNPKAF-NQVFNI 264
Query: 150 VSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT DG+A+ CA+A G P EIVHY+PK KKAFP R+ HF+A AK L
Sbjct: 265 SGSKYVTFDGIARACAKAGGFPDPEIVHYNPKNFDFGKKKAFPLRDQHFFASIDKAKQEL 324
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 255
W NL + L++ +E G+ +K F D+ IL + +V V
Sbjct: 325 DWTPRFNLVDGLRDSYELDFGRGKFRKEADFSTDEMILSAGRVHATV 371
>gi|302798457|ref|XP_002980988.1| hypothetical protein SELMODRAFT_178601 [Selaginella moellendorffii]
gi|300151042|gb|EFJ17689.1| hypothetical protein SELMODRAFT_178601 [Selaginella moellendorffii]
Length = 371
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 128/223 (57%), Gaps = 5/223 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H + E + + W S RP Y+ G
Sbjct: 146 LQQYIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLDTESLLQDKGVTWTSIRPVYIYG 205
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+P+PGSG+Q T + HV+DL+ ++NP+A + +FN+
Sbjct: 206 PLNYNPVEEWFFHRLKAGRPIPVPGSGLQITQLGHVKDLADAFVKVMDNPKAF-NQVFNI 264
Query: 150 VSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT DG+A+ CA+A G P EIVHY+PK KKAFP R+ HF+A AK L
Sbjct: 265 SGSKYVTFDGIARACAKAGGFPDPEIVHYNPKNFDFGKKKAFPLRDQHFFASIDKAKQEL 324
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKV 251
W NL + L++ +E G+ +K F D+ IL + +V
Sbjct: 325 DWTPRFNLVDGLRDSYELDFGRGKFRKEADFSTDEMILSAGRV 367
>gi|413941840|gb|AFW74489.1| hypothetical protein ZEAMMB73_436145 [Zea mays]
gi|413954162|gb|AFW86811.1| hypothetical protein ZEAMMB73_149219 [Zea mays]
Length = 375
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 124/220 (56%), Gaps = 6/220 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEG-DVVKPDAGH---VQVEKYISENFSNWASFRPQYMI 88
++Q+++ SSAG+Y +D PH E D V P + H ++ E ++ NW S RP Y+
Sbjct: 151 LQQYIYCSSAGVYLKSDILPHCEVVDAVDPKSRHKGKLETESLLTSRGVNWTSIRPVYIY 210
Query: 89 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 148
G N EEWFF R+ RP+PIPG+G Q T + HV+DL+ L + NP+ AS IFN
Sbjct: 211 GPLNYNPVEEWFFHRLKAGRPIPIPGAGNQITQLGHVKDLARAFNLVLGNPK-ASKQIFN 269
Query: 149 LVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 207
+ + VT DG+A+ CA+A G P E+VHY+PK KKAFPFR+ HF+A A
Sbjct: 270 ISGAKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKATSE 329
Query: 208 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILE 247
LGW +L + L + G +K F DD IL+
Sbjct: 330 LGWTPEFDLVQGLTNSYNLDFGRGTFRKEADFTTDDMILD 369
>gi|428226603|ref|YP_007110700.1| NAD-dependent epimerase/dehydratase [Geitlerinema sp. PCC 7407]
gi|427986504|gb|AFY67648.1| NAD-dependent epimerase/dehydratase [Geitlerinema sp. PCC 7407]
Length = 311
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 135/221 (61%), Gaps = 8/221 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++ F+++SSAG+Y+ +D+ PHVEGD V P + H + E Y++ + S RP Y+ G
Sbjct: 89 LQHFVYVSSAGVYQKSDQMPHVEGDAVDPKSRHRGKFETEDYLATQGVPFTSIRPVYIYG 148
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N E WFFDRIVR RPVPIPG+G T + HV+DL+ + + N +A I+N+
Sbjct: 149 PQNYNPLESWFFDRIVRDRPVPIPGNGAHLTQLGHVQDLAKAMAAVLGNSQAI-GQIYNI 207
Query: 150 VSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
DRAVT DG+A+ CA AAG +++VHYDPKA +KAFP R HF+ AK
Sbjct: 208 SGDRAVTFDGLARACAAAAGKDPGTLDLVHYDPKAFDFGKRKAFPMRVQHFFTSIDKAKH 267
Query: 207 ILGWRSTTNLPEDLKERFEE-YVKIGRDKKAMQFEIDDKIL 246
LGW+ +L L++ F++ Y+ +D++ + F D++I+
Sbjct: 268 ELGWQPEFDLVGGLRDSFQQDYLATHQDQREVDFSTDEEIV 308
>gi|413941842|gb|AFW74491.1| hypothetical protein ZEAMMB73_436145 [Zea mays]
gi|413954160|gb|AFW86809.1| hypothetical protein ZEAMMB73_149219 [Zea mays]
Length = 321
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 124/220 (56%), Gaps = 6/220 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEG-DVVKPDAGH---VQVEKYISENFSNWASFRPQYMI 88
++Q+++ SSAG+Y +D PH E D V P + H ++ E ++ NW S RP Y+
Sbjct: 97 LQQYIYCSSAGVYLKSDILPHCEVVDAVDPKSRHKGKLETESLLTSRGVNWTSIRPVYIY 156
Query: 89 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 148
G N EEWFF R+ RP+PIPG+G Q T + HV+DL+ L + NP+ AS IFN
Sbjct: 157 GPLNYNPVEEWFFHRLKAGRPIPIPGAGNQITQLGHVKDLARAFNLVLGNPK-ASKQIFN 215
Query: 149 LVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 207
+ + VT DG+A+ CA+A G P E+VHY+PK KKAFPFR+ HF+A A
Sbjct: 216 ISGAKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKATSE 275
Query: 208 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILE 247
LGW +L + L + G +K F DD IL+
Sbjct: 276 LGWTPEFDLVQGLTNSYNLDFGRGTFRKEADFTTDDMILD 315
>gi|302795358|ref|XP_002979442.1| hypothetical protein SELMODRAFT_110839 [Selaginella moellendorffii]
gi|300152690|gb|EFJ19331.1| hypothetical protein SELMODRAFT_110839 [Selaginella moellendorffii]
Length = 358
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 135/255 (52%), Gaps = 8/255 (3%)
Query: 6 AKFKALFRTNNNFRLQ-RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F+ ++ N ++ P+ D S +KQ+++ SSAG+Y +D PH E D P +
Sbjct: 105 AGFEIVYDINGREAVEVEPIIDAIPS--LKQYIYCSSAGVYLKSDLLPHFEVDATDPKSR 162
Query: 65 H---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN 121
H + E + W S RP Y+ G N EEWFF R+ RP+PIP SG+Q T
Sbjct: 163 HKGKLDTEALLQSKGVPWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGLQITQ 222
Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPK 180
+ HV+DL+ ++NP A ++N+ + VT G+A+ CA+A G P E+VHY+PK
Sbjct: 223 LGHVKDLADAFVRVLDNP-TAFGQVYNISGAKYVTFAGIARACAKAGGFPTPELVHYNPK 281
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFE 240
KK+FP R+ HF+ AK+ LGW L + L + + +G +KA F
Sbjct: 282 DFDFGKKKSFPLRDQHFFTSIEKAKNDLGWSPKYGLVDGLTDSYNLDFGLGTFRKAADFS 341
Query: 241 IDDKILESLKVPIPV 255
DD ILE L + + V
Sbjct: 342 TDDMILEKLGIKVAV 356
>gi|357150725|ref|XP_003575555.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic-like
[Brachypodium distachyon]
Length = 695
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 125/218 (57%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E + ++ NW S RP Y+ G
Sbjct: 155 LEQFIYCSSAGVYLKSDLLPHFETDAVDPKSRHKGKLETESLLEKSGVNWTSIRPVYIYG 214
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIPG+G Q T + HV+DL++ + NP AAS ++N+
Sbjct: 215 PLNYNPVEEWFFHRLKAGRPIPIPGAGNQITQLGHVKDLATAFIKVLGNP-AASKQVYNI 273
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT DG+A+ CA+A G P EI+HY+PK KKAFPFR+ HF+A A L
Sbjct: 274 SGTKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASKEL 333
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
G+ +L + L + + G +K F DD IL
Sbjct: 334 GFTPEYDLVDGLTDSYSLDFGRGTFRKEADFTTDDMIL 371
>gi|302792238|ref|XP_002977885.1| hypothetical protein SELMODRAFT_107618 [Selaginella moellendorffii]
gi|300154588|gb|EFJ21223.1| hypothetical protein SELMODRAFT_107618 [Selaginella moellendorffii]
Length = 358
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 135/255 (52%), Gaps = 8/255 (3%)
Query: 6 AKFKALFRTNNNFRLQ-RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
A F+ ++ N ++ P+ D S +KQ+++ SSAG+Y +D PH E D P +
Sbjct: 105 AGFEIVYDINGREAVEVEPIIDAIPS--LKQYIYCSSAGVYLKSDLLPHFEVDATDPKSR 162
Query: 65 H---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN 121
H + E + W S RP Y+ G N EEWFF R+ RP+PIP SG+Q T
Sbjct: 163 HKGKLDTEALLQSKGVPWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGLQITQ 222
Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPK 180
+ HV+DL+ ++NP A ++N+ + VT G+A+ CA+A G P E+VHY+PK
Sbjct: 223 LGHVKDLADAFVRVLDNP-TAFGQVYNISGAKYVTFAGIARACAKAGGFPTPELVHYNPK 281
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFE 240
KK+FP R+ HF+ AK+ LGW L + L + + +G +KA F
Sbjct: 282 DFDFGKKKSFPLRDQHFFTSIEKAKNDLGWSPKYGLVDGLTDSYNLDFGLGTFRKAADFS 341
Query: 241 IDDKILESLKVPIPV 255
DD ILE L + + V
Sbjct: 342 TDDMILEKLGIKVAV 356
>gi|427420133|ref|ZP_18910316.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
gi|425762846|gb|EKV03699.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
Length = 300
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 130/222 (58%), Gaps = 9/222 (4%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIG 89
V+QF+++SSAG+Y +++ PHVEGD V P + H E Y+ E + + RP Y+ G
Sbjct: 83 VQQFIYVSSAGVYLKSEQMPHVEGDPVDPSSRHKGKHHTEDYLIEQGVPFTAIRPVYIYG 142
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N E+WFFDRI RP+PIPG+G T + H DL+ + + NP+A ++N+
Sbjct: 143 PQNYNPLEKWFFDRISHDRPLPIPGNGKAITQLGHCEDLAQAMVSVLGNPKAI-GQVYNI 201
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+R VT DG+A CA+A G PV +I HYDP +KAFP R HF+ A+ L
Sbjct: 202 SGERYVTFDGLAHACAEAMGKPVPDIRHYDPSQFDFGKRKAFPMRVQHFFTSIGKAQSDL 261
Query: 209 GWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKILESL 249
GW +L LK+ ++ +Y + ++A+ FE+DD+IL S+
Sbjct: 262 GWTPKYSLVNGLKDSYQNDYCQ---SEQAVDFELDDQILTSV 300
>gi|116786922|gb|ABK24300.1| unknown [Picea sitchensis]
Length = 407
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 123/218 (56%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H + E ++ NW S RP Y+ G
Sbjct: 183 IEQYIYCSSAGVYLKSDILPHFETDAVDPKSRHKGKLNTENLLTTRGVNWTSLRPVYIYG 242
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIP SG+Q T + HV+DL+ + + N E AS ++N+
Sbjct: 243 PLNYNPVEEWFFHRLKAGRPIPIPKSGLQMTQLGHVKDLARAFLMVLGN-EKASKQVYNI 301
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT G+AK CA+AAG P +IVHY+PK KK+FP R+ HF+ A+ L
Sbjct: 302 SGAKYVTFSGLAKACAKAAGFPEPDIVHYNPKEFDFGKKKSFPLRDQHFFTSIEKAQTDL 361
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
GW+ +L + L + + G +K F +DD IL
Sbjct: 362 GWKPEFDLVKGLTDSYNLDFGRGTFRKEPDFSVDDMIL 399
>gi|449017271|dbj|BAM80673.1| similar to mRNA-binding protein [Cyanidioschyzon merolae strain
10D]
Length = 429
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 138/234 (58%), Gaps = 11/234 (4%)
Query: 27 WAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE-KYISENFSNWASFRPQ 85
+A +++L++SS GIY+P D P +E D V+ AG QVE +++ ++ +A+FRP
Sbjct: 186 FAMGLNAERYLYVSSCGIYEPGDYAPFIETDQVRQSAGQAQVESRFLRDSVIPFAAFRPM 245
Query: 86 YMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV-ENPEAAS 143
Y+IG K D +F DRI RKRP+P+PG G F ++ H D++SML AV P+ S
Sbjct: 246 YIIGKHAAKLDYTNFFLDRITRKRPIPLPGKGNAFVSLTHAEDVASMLACAVLARPDEVS 305
Query: 144 SNIFNLVSDRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKA--FPFRNMH-F 197
+FN VS R VTL G+A++C + EI++YDP GID K+A PFR + F
Sbjct: 306 GQVFNAVSPRYVTLKGLAEMCHRVVHGDKSKPEIIYYDPVKLGIDPKEATGLPFRVSYPF 365
Query: 198 YAEPRAAKDILGW--RSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESL 249
A+P A +L W R L DL+E +EEY+++G ++ + DD+I S+
Sbjct: 366 IADPGKAMRLLAWQPRHDRTLQNDLQEMYEEYLELGLHERRVDLTNDDRIARSV 419
>gi|428218511|ref|YP_007102976.1| NAD-dependent epimerase/dehydratase [Pseudanabaena sp. PCC 7367]
gi|427990293|gb|AFY70548.1| NAD-dependent epimerase/dehydratase [Pseudanabaena sp. PCC 7367]
Length = 311
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 141/251 (56%), Gaps = 14/251 (5%)
Query: 8 FKALF-RTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH- 65
F A+F + +P+ D + ++ F+++SSAG+Y+ ++ P+ E D P++ H
Sbjct: 59 FDAIFDNSGRELSDTKPIVDMFRDR-IRHFIYMSSAGVYQESETLPYFEEDPTNPESRHK 117
Query: 66 --VQVEKYISENFSN----WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF 119
+ E Y+ + +S + S RP Y+ G GN D E WFFDRIVR RPVPIPG+G
Sbjct: 118 GKLHTEAYLKKLYSAEGFPFTSIRPTYIYGPGNYNDVEAWFFDRIVRDRPVPIPGNGQFI 177
Query: 120 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVH 176
T + HV DL++ + ++ P+ I+N+ R VT G+AKLCAQA G ++ V+
Sbjct: 178 TQLGHVEDLAAAMAAVLKQPK-TYGEIYNISDIRYVTYSGIAKLCAQAIGKDPDKLQFVY 236
Query: 177 YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF-EEYVKIGRDKK 235
Y+PK KKAFPFR HF+ A L W +L E L+ F ++YV GR ++
Sbjct: 237 YNPKDFDFGKKKAFPFRLQHFFTAIDKALLDLDWEPEFDLVEGLETSFKQDYVPSGRHEQ 296
Query: 236 AMQFEIDDKIL 246
+ F IDD+I+
Sbjct: 297 EIDFAIDDQII 307
>gi|326531332|dbj|BAK05017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 369
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 122/218 (55%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++QF++ SSAG+Y +D PH E D V P + H ++ E + + NW S RP Y+ G
Sbjct: 146 LEQFIYCSSAGVYLKSDLLPHFETDAVDPKSRHKGKLETESLLETSGVNWTSIRPVYIYG 205
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+PIP +G Q T + HV+DL++ + NP+ AS ++N+
Sbjct: 206 PLNYNPVEEWFFHRLKAGRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPK-ASKQVYNI 264
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT DG+A+ CA+A G P EI+HY+PK KKAFPFR+ HF+A A L
Sbjct: 265 SGSKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASKDL 324
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
G +L + L + + G +K F DD IL
Sbjct: 325 GVTPEYDLLDGLTDSYNLDFGRGTFRKEADFTTDDMIL 362
>gi|218186738|gb|EEC69165.1| hypothetical protein OsI_38123 [Oryza sativa Indica Group]
Length = 373
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 123/222 (55%), Gaps = 16/222 (7%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q+++ SSAG+Y +D PH E D V P + H ++ E + NW S RP Y+ G
Sbjct: 153 LEQYIYCSSAGVYLKSDLLPHFETDAVDPKSRHKGKLETESLLETRDVNWTSIRPVYIYG 212
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF R+ RP+P+PG+G Q T + HV+DL++ LA+ NP+ AS +FN+
Sbjct: 213 PLNYNPVEEWFFHRLKAGRPIPVPGAGNQITQLGHVKDLATAFVLALGNPK-ASKQVFNI 271
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT DG+A+ CA+A G P EIVHY+PK KKAFPFR+ HF+A A+
Sbjct: 272 SGAKYVTFDGLARACAKAGGFPEPEIVHYNPKDFDFGKKKAFPFRDQHFFASILGARVEA 331
Query: 209 G----WRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
G WR++ R G +K F DD IL
Sbjct: 332 GVRPWWRASPTRTTSTSPR-------GTFRKPADFTTDDMIL 366
>gi|302828240|ref|XP_002945687.1| hypothetical protein VOLCADRAFT_78664 [Volvox carteri f.
nagariensis]
gi|300268502|gb|EFJ52682.1| hypothetical protein VOLCADRAFT_78664 [Volvox carteri f.
nagariensis]
Length = 401
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 127/224 (56%), Gaps = 5/224 (2%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYM 87
S ++Q+++ SSAG+Y D+ PH E D V P + H + E+ + ++ N+ S RP Y+
Sbjct: 156 STLEQYIYCSSAGVYLKNDQMPHREEDAVDPKSRHKGKLDTEELLRKSGVNFTSIRPVYI 215
Query: 88 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 147
G N EEWFF R+ RP+P+PGSG Q T + HV+DL++ + N +AA I+
Sbjct: 216 YGPLNYNPVEEWFFHRLKAGRPIPVPGSGQQVTQLGHVKDLATAFVKVLGNKKAA-RQIY 274
Query: 148 NLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
N+ +R VT DG+AK CA+A GLP E++HY+ K K FP R+ HF+A A
Sbjct: 275 NISGERFVTFDGIAKACAKAMGLPEPELIHYNAKEFDFGKDKPFPMRDQHFFASVDKAMA 334
Query: 207 ILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLK 250
L W L + LK+ + + G +K F+ DD ILE +K
Sbjct: 335 ELDWTPEFGLLDGLKDSYTKDFGRGTFRKEANFKCDDLILEKVK 378
>gi|428173772|gb|EKX42672.1| hypothetical protein GUITHDRAFT_73722 [Guillardia theta CCMP2712]
Length = 322
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 132/245 (53%), Gaps = 14/245 (5%)
Query: 4 NYAKFKALFRTNNNFRLQRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHVEGDVVKPD 62
NYAK K + VA AK++ VK + ++SSAG+Y+ + P VE K
Sbjct: 86 NYAKDKTV----------STVAGLAKNTWRVKNYAYVSSAGMYESSVPQPMVETGATKA- 134
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTN 121
G VE++++ W SFRPQY+ G NK D +WFF RI R RP P+PG G Q +
Sbjct: 135 TGQRAVEEFLASQELPWTSFRPQYIYGPYTNKRDYLDWFFHRITRDRPCPLPGDGNQMAS 194
Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 181
+ V D+++ML V +AA +FN +D V+ + ++ Q G +IV Y+PK+
Sbjct: 195 VTRVEDVAAMLASVVGKEDAAKGQVFNCGTDNMVSYRQICEMIGQVVGKSPKIVTYNPKS 254
Query: 182 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEI 241
+ K AFPFRN F P AK +LGW +L EDL FE Y G + KAM+FE
Sbjct: 255 FEL-PKGAFPFRNTEFCVTPEKAKKVLGWSRKHSLSEDLPWYFESYKAAGLEGKAMEFEA 313
Query: 242 DDKIL 246
D+ IL
Sbjct: 314 DEIIL 318
>gi|428222381|ref|YP_007106551.1| nucleoside-diphosphate-sugar epimerase [Synechococcus sp. PCC 7502]
gi|427995721|gb|AFY74416.1| nucleoside-diphosphate-sugar epimerase [Synechococcus sp. PCC 7502]
Length = 310
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 138/257 (53%), Gaps = 14/257 (5%)
Query: 5 YAKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA 63
Y +F A+F N +P+ D + ++ F+++SSAG+Y ++ P+ EGD V P +
Sbjct: 55 YEQFDAIFDNNGRELTDTKPLVDLFRDR-IRHFVYMSSAGVYLDSEILPYFEGDAVDPKS 113
Query: 64 GH---VQVEKYISENFSN----WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG 116
H + E Y+ + + + S RP Y+ G GN D E WFFDRIVR RP+PIPG+G
Sbjct: 114 RHKGKLHTESYLKQAYDEIGFPFTSIRPTYIYGPGNYNDLEAWFFDRIVRDRPIPIPGNG 173
Query: 117 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP---VE 173
T + HV DL + + AV + I+N+ R VT G+A+ A AAG ++
Sbjct: 174 KFITQLGHVEDLVAAMA-AVLDKSITLGEIYNISDIRYVTFTGLAQATAIAAGKSPDQIK 232
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE-YVKIGR 232
IV+Y+PK KKAFP R+ HF+A A L W +L + L F++ Y+ R
Sbjct: 233 IVYYNPKDFDFGKKKAFPLRSQHFFAAVDKAMTDLDWEPEFDLVDGLVTSFQQDYLPSDR 292
Query: 233 DKKAMQFEIDDKILESL 249
+ F +DD+IL SL
Sbjct: 293 QNADIDFSVDDQILASL 309
>gi|159464355|ref|XP_001690407.1| chloroplast stem-loop-binding protein [Chlamydomonas reinhardtii]
gi|34398360|gb|AAO22242.1| 38 kDa ribosome-associated protein precursor [Chlamydomonas
reinhardtii]
gi|158279907|gb|EDP05666.1| chloroplast stem-loop-binding protein [Chlamydomonas reinhardtii]
Length = 401
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 132/232 (56%), Gaps = 6/232 (2%)
Query: 23 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNW 79
PV KS+ ++Q+++ SSAG+Y D PH E D V P + H + E+ + ++ N+
Sbjct: 152 PVLKGTKST-LEQYIYCSSAGVYLKNDMMPHREEDAVDPKSRHKGKLDTEELLRKSGVNF 210
Query: 80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
S RP Y+ G N EEWFF R+ RP+P+PGSG Q T + HV+DLS+ + N
Sbjct: 211 TSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPGSGQQVTQLGHVKDLSTAFVKVLGNK 270
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFY 198
+AA ++N+ +R VT DG+AK CA+A G+P E++HY+ K KAFP R+ HF+
Sbjct: 271 KAA-RQVYNISGERFVTFDGIAKACAKAMGVPEPELIHYNAKEFDFGKDKAFPMRDQHFF 329
Query: 199 AEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLK 250
A A L W L + LK+ +++ G +K F+ DD I+E+ K
Sbjct: 330 ASVDKAMADLDWTPEFGLVDGLKDSYKKDFGRGTFRKEPNFKCDDMIIEAKK 381
>gi|384248223|gb|EIE21708.1| NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]
Length = 369
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 123/218 (56%), Gaps = 5/218 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
V Q++F SSAG+Y + + PH E D V P + H + E + E NW S RP Y+ G
Sbjct: 150 VGQYIFCSSAGVYLKSSQMPHFEVDAVDPKSRHKGKLNTEALLEEKNVNWTSIRPVYIYG 209
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EEWFF RI RP+PIP SG Q T + HV+DL++ ++N E AS ++N+
Sbjct: 210 PLNYNPVEEWFFHRIKEGRPIPIPNSGQQVTQLGHVKDLATAFVKVLDN-EKASRQVYNI 268
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+R VT DG+AK CA AAG P E+VHY+PK KKAFP R+ HF+ A+ L
Sbjct: 269 SGERFVTFDGIAKACAAAAGAPEPELVHYNPKDFDFGGKKAFPLRDQHFFTSIAKAQADL 328
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
W L + LK+ FE+ G +KA F DD IL
Sbjct: 329 DWTPEYGLVDGLKDSFEKDFGRGTFRKAADFSTDDMIL 366
>gi|242041721|ref|XP_002468255.1| hypothetical protein SORBIDRAFT_01g042510 [Sorghum bicolor]
gi|241922109|gb|EER95253.1| hypothetical protein SORBIDRAFT_01g042510 [Sorghum bicolor]
Length = 189
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 97/170 (57%), Gaps = 43/170 (25%)
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD--------------------- 102
GHV VEKYI+E F +WASFRPQYMIGS NNKDCEEWFFD
Sbjct: 12 GHVVVEKYIAEQFGSWASFRPQYMIGSSNNKDCEEWFFDSNNNNQQPVTPFNPVVFSSLP 71
Query: 103 ------------------RIVRKRPVPI-PGS-GMQFTNIAHVRDLSSMLTLAVENPEAA 142
R R P PG Q TNIAHVRDLS ML+L+VE P AA
Sbjct: 72 AAVHDRLQQQQGLRGVVLRQDRTEPAGADPGERDAQLTNIAHVRDLSRMLSLSVEKPGAA 131
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
IFN VSDRAVTL GM KLCA AG VEIV DP AAG+D KKAFPF
Sbjct: 132 LGKIFNCVSDRAVTLSGMNKLCAAGAG--VEIVLNDPAAAGVDDKKAFPF 179
>gi|387196718|gb|AFJ68775.1| hypothetical protein NGATSA_3008300 [Nannochloropsis gaditana
CCMP526]
Length = 373
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 129/229 (56%), Gaps = 7/229 (3%)
Query: 23 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
P D A++ ++ ++F+SS G+Y+ D P +E V + ++E I + + F
Sbjct: 146 PFLDLARAWPLQVYVFVSSGGMYQVEDSFPLLEDSPVALNEPR-KIELAIEASGLPYTFF 204
Query: 83 RPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
RPQY+ G +K D +WFF R+VR +P+P+P G QFT + HV D++S+L V+NP+A
Sbjct: 205 RPQYIYGPLTSKRDYLDWFFHRLVRDKPLPLPLHGDQFTTLTHVEDVASLLAAVVDNPQA 264
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAF-PFRNMHF 197
+FN SDR +T G+ + A G IV YDP D K + PFRN HF
Sbjct: 265 LR-QVFNCASDRCITFKGVVGVAGNAMGRKDAKEAIVLYDPAERKADLPKGWWPFRNTHF 323
Query: 198 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
P AK +LGW +L +DL+E + YV G DKK M FE+D+KIL
Sbjct: 324 NVSPEKAKRLLGWVPAHDLAKDLEEYYRGYVAAGLDKKEMSFEVDEKIL 372
>gi|443475570|ref|ZP_21065515.1| NAD-dependent epimerase/dehydratase [Pseudanabaena biceps PCC 7429]
gi|443019578|gb|ELS33647.1| NAD-dependent epimerase/dehydratase [Pseudanabaena biceps PCC 7429]
Length = 311
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 125/229 (54%), Gaps = 12/229 (5%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYI----SENFSNWASFRPQ 85
++ F+++SSAG+Y +D P+ E D P + H + E Y+ SEN + S RP
Sbjct: 84 LQHFVYMSSAGVYLDSDILPYRETDATDPKSRHKGKLDTESYLQQLHSENGFPYTSIRPT 143
Query: 86 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 145
Y+ G N D E WFFDRIVR RP+PIPG+G T + HV DL+ + + N +A
Sbjct: 144 YIYGPQNYNDVEAWFFDRIVRDRPIPIPGNGQFITQLGHVEDLARAMAAVLGNQQAIGE- 202
Query: 146 IFNLVSDRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 202
I+N+ +R VT G+AK CA AAG + V+Y+PK KKAFPFR HF+A
Sbjct: 203 IYNISDNRYVTFVGLAKQCAIAAGKDPSQLNFVYYNPKDFDFGKKKAFPFRLQHFFAAIA 262
Query: 203 AAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKILESLK 250
A L W+ +L L FE +Y+ R + + F D +IL+S K
Sbjct: 263 KANQDLQWQPKYDLVSGLTTSFELDYLPSNRHQADIDFATDAQILDSAK 311
>gi|452825058|gb|EME32057.1| NAD-dependent epimerase/dehydratase [Galdieria sulphuraria]
Length = 378
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 145/254 (57%), Gaps = 14/254 (5%)
Query: 7 KFKALFRTNNNFRLQRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
K+ A+F +NN R W G ++ ++++SSAG+YK + PH E D V ++
Sbjct: 122 KWDAIF--DNNGRELSDSKPWIDGLGHSIQHYMYMSSAGVYKESGLLPHREEDAVDHNSR 179
Query: 65 H---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN 121
H ++ E+Y+ ++ + RP Y+ G N EEWFF RI + RP+PIPG G+ T
Sbjct: 180 HKGKLETEQYLKQSGIPFTCIRPTYIYGPRNYNPVEEWFFKRIDQNRPIPIPGHGLHITG 239
Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYD 178
+ HV DL+ + LA+ N +A S +N+ +VT DG AKLCA AAG +E++HYD
Sbjct: 240 LGHVEDLAKAMVLALGNQQAVSQT-YNIQGRYSVTFDGFAKLCAIAAGKDPNKLELIHYD 298
Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYV-KIGRDKKA 236
PK KK+FPFR HF+ A+ L W+ +L LK+ +E +++ K R+ +
Sbjct: 299 PKKV-PKDKKSFPFRPQHFFCSCAKAERELQWKERWDLVSGLKDSYENDFIEKKKRNAIS 357
Query: 237 MQFEIDDKILESLK 250
F +DD+ILESLK
Sbjct: 358 FDFSLDDQILESLK 371
>gi|223995261|ref|XP_002287314.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976430|gb|EED94757.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 349
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 123/229 (53%), Gaps = 8/229 (3%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+ V D K K ++SSAGIYKP DE P E VK AG V+ EKY E + S
Sbjct: 124 KAVIDCVKEWNSKLLTYVSSAGIYKPKDEFPMPETTPVKDTAGQVEYEKYAVEKGLPFVS 183
Query: 82 FRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
FRPQY+ G +NK D +W+FDR+VR P+PIPG G Q ++ + D++S+L + +
Sbjct: 184 FRPQYIYGEKSNKWDYIDWYFDRLVRGEPLPIPGDGSQKVSLTNSEDVASLLASVLNDES 243
Query: 141 AA-SSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAGIDAKKAFPFRNMHFY 198
AA FN +D+ VT D +A +CA+ AG + +I HYD K FPFR FY
Sbjct: 244 AAVGQTFFNCGTDQLVTYDEVALMCAEVAGVMDAKIHHYDDSL----GKAKFPFRLTDFY 299
Query: 199 AEPRAAKDILGWRSTT-NLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
P AK LGW +L EDL F+ Y G K M F D ++L
Sbjct: 300 VSPDMAKAKLGWEGAKHSLKEDLTWYFDSYKARGGPAKEMTFVEDKEVL 348
>gi|24251257|gb|AAN46177.1| unknown protein [Synechococcus elongatus PCC 7942]
Length = 313
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 126/224 (56%), Gaps = 8/224 (3%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGS 90
+Q +++SSAG+Y +D+ P E D V P + H + E ++ + + +FRP Y+ G
Sbjct: 88 QQLIYVSSAGVYAASDQLPLRESDPVDPQSRHRGKFETENWLQQQGLPFTAFRPVYIYGP 147
Query: 91 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 150
GN E+W P+PIPG+G+ T + HV DL++ + AV+NP A I+NL
Sbjct: 148 GNYNPLEQWSSIAFCVIGPLPIPGTGLHLTQLGHVEDLATAMVAAVKNPRAI-GQIYNLS 206
Query: 151 SDRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 207
DR V+ DG+A+ CA AAG + +VHYDPK + +KAFP R HF A+
Sbjct: 207 GDRYVSFDGLARACAIAAGRDPQALHLVHYDPKQLNLGKRKAFPMRAQHFITAIDQARQD 266
Query: 208 LGWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKILESLK 250
L W +L + L+ + +Y+ G D++A+ F +D++IL ++
Sbjct: 267 LEWVPRFSLIDGLQNSLQNDYLARGLDQQAVDFSLDEEILAAVS 310
>gi|449016344|dbj|BAM79746.1| similar to mRNA binding protein CSP41 precursor [Cyanidioschyzon
merolae strain 10D]
Length = 414
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 8 FKALFRTNNN-FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A+F N RP A+ + + ++++SSAG+Y + PH+EGD P + H+
Sbjct: 165 FDAIFDMNGRELEDTRPFAELF-AGKIDHYVYMSSAGVYLQSPVLPHIEGDACDPKSRHL 223
Query: 67 ---QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
Q E+++ + W + RP Y+ G N EEWFF RI RP+PIPG G T +
Sbjct: 224 GKLQTEEFLDSHGLPWTAIRPTYIYGPSNYNPIEEWFFARIAEDRPIPIPGDGTYMTGLG 283
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPK 180
HV DL++ + NP A ++N+ ++VT +G+AK+CA A G + IVHYDP
Sbjct: 284 HVADLANAFAAVLGNPRAV-GKVYNIQDRKSVTYNGIAKMCALAMGRDPESIRIVHYDPN 342
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE--YVKIGRDKKAMQ 238
I KAFPFR HF+ A L W +L + L++ + K K +
Sbjct: 343 RVDIGKAKAFPFRLQHFFTSVNRALRELDWDVDFDLLDGLRDSYHNDFLPKKQAGKLQVD 402
Query: 239 FEIDDKILESL 249
F+ DD IL +
Sbjct: 403 FKTDDLILSQV 413
>gi|299117075|emb|CBN73846.1| mRNA binding protein [Ectocarpus siliculosus]
Length = 333
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 119/214 (55%), Gaps = 5/214 (2%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+ +AD +K+ GVK + ++SS G+YK +DE P E VK ++G QVEKY+++ W S
Sbjct: 97 KDLADCSKAWGVKNYAYVSSGGMYKDSDEVPFTESSDVK-ESGQRQVEKYVADLGLPWTS 155
Query: 82 FRPQYMIGSGNNK-DCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
FRPQY+ G NK D +WFFDR+V +P+P G Q + H D++SML V N
Sbjct: 156 FRPQYIYGPLTNKRDYLDWFFDRVVHGLEFIPLPLHGDQLVALTHAEDVASMLASVVGN- 214
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA-FPFRNMHFY 198
E A +FN SDR +T +G+ + + A V + Y + D KK FPFRN HF
Sbjct: 215 ERAVKQVFNCASDRYITYNGLFREVGKVAKPAVSKMAYYYEPRDYDLKKGWFPFRNNHFV 274
Query: 199 AEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR 232
AK +LGW + +DL E FE Y G+
Sbjct: 275 VNSEKAKRLLGWSPKHTITDDLAEYFEGYKAAGK 308
>gi|219111441|ref|XP_002177472.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217412007|gb|EEC51935.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 404
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 134/242 (55%), Gaps = 12/242 (4%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKP-ADEP-PHVEGDVVKPDAGHVQVEKYISENFSNW 79
+ + D AK+ VK F ++SSAG+Y+P AD P P E +K AG Q ++Y +
Sbjct: 143 QAICDLAKAWNVKLFTYVSSAGMYQPTADAPFPMPETTPIKESAGQNQFDQYAIQQGLPL 202
Query: 80 ASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
+FRPQY+ G NK D +W+FDR+VR+ P+PIPG G Q ++ + D++S+L + +
Sbjct: 203 VTFRPQYIYGPKANKHDYIDWYFDRLVRELPLPIPGDGTQKLSLTNAEDVASLLAAPLND 262
Query: 139 PEAA-SSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRN 194
AA + +FN +D+ V+ D +A LCA+AAG+ V I HYD G K FPFR
Sbjct: 263 EAAAIAQRVFNCGTDQLVSYDEVAYLCAEAAGIDKDKVMIEHYDADMFG---KATFPFRM 319
Query: 195 MHFYAEPRAAKDILGWRS-TTNLPEDLKE-RFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
FY P AK+ LGW +L +DL+ +E YV G K M D +I K
Sbjct: 320 TDFYVAPDTAKEKLGWSGPLHSLKDDLQSFYYESYVARGGPTKKMSLIKDWEITVGSKTS 379
Query: 253 IP 254
+P
Sbjct: 380 LP 381
>gi|307104990|gb|EFN53241.1| hypothetical protein CHLNCDRAFT_36589 [Chlorella variabilis]
Length = 407
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 127/222 (57%), Gaps = 5/222 (2%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
++Q++F SSAG+YK +D+ PH E D V + H + E+ + + NW S RP Y+ G
Sbjct: 180 IQQYIFCSSAGVYKKSDQMPHREEDEVDFKSRHKGKLFTEELLEQRGINWTSVRPVYIYG 239
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
N EE+FF RI RP+ +PGSGMQ T + HV+DL++ + NP+AA ++N+
Sbjct: 240 PLNYNPVEEFFFHRIKAGRPICVPGSGMQVTQLGHVKDLATAFVKILGNPKAA-RQVYNV 298
Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+R VT DG+AK CA A G P E+VH++PK KAFP R+ HF+A A L
Sbjct: 299 AGERYVTFDGLAKACAAAMGAPEPELVHFNPKDFDFGKAKAFPMRDQHFFASVDKAMADL 358
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLK 250
W L + L++ +E+ G +K + DD +LE +K
Sbjct: 359 DWVPEFGLLDGLRDSYEKDFGRGTFRKEPDYTADDMVLERVK 400
>gi|115445775|ref|NP_001046667.1| Os02g0316800 [Oryza sativa Japonica Group]
gi|113536198|dbj|BAF08581.1| Os02g0316800, partial [Oryza sativa Japonica Group]
Length = 143
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
Query: 20 LQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW 79
+RPV DWAK++GV QF +SSAGIY P+DEPPH+EGD VK +AGHV VEKYI+E F +W
Sbjct: 7 CRRPVVDWAKAAGVGQF--VSSAGIYTPSDEPPHIEGDAVKENAGHVSVEKYIAEQFGSW 64
Query: 80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRP 109
ASFRPQYMIGSGNNKDCEEWFFD + + P
Sbjct: 65 ASFRPQYMIGSGNNKDCEEWFFDSKITQIP 94
>gi|397632209|gb|EJK70458.1| hypothetical protein THAOC_08181, partial [Thalassiosira oceanica]
Length = 255
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 126/230 (54%), Gaps = 11/230 (4%)
Query: 21 QRP-VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW 79
+RP +A + + K ++SSAG+Y P DE P E VK AG V+ E++ E+ +
Sbjct: 27 ERPLIAQISGARNSKLLCYVSSAGVYLPVDEFPMPESTPVKETAGQVEYERHALESGIPF 86
Query: 80 ASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
SFRPQY+ G +NK D +W+FDRIV+ P+PIP G Q ++ + D++S+L + +
Sbjct: 87 CSFRPQYIYGEKSNKWDYIDWYFDRIVKGAPLPIPSPGSQKVSLTNSVDVASLLASVLND 146
Query: 139 PEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 197
+AA+ + FN + V+ D +A +CA+AAGL +I HY+P+ K FPFR F
Sbjct: 147 EKAAAEQVYFNCGTSNLVSYDEVASMCAEAAGLSAKIEHYNPEL----GKAKFPFRLTDF 202
Query: 198 YAEPRAAKDILGWRS-TTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
Y P A L W L +DL +E Y K + +DD++L
Sbjct: 203 YVAPDMATSKLKWEGPKCTLKDDLGWYYESY---KARSKTVDLSVDDEVL 249
>gi|422293604|gb|EKU20904.1| nad-dependent epimerase dehydratase [Nannochloropsis gaditana
CCMP526]
Length = 354
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 122/235 (51%), Gaps = 10/235 (4%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSN 78
+P+AD A + V F+++SSAG+Y +D PH E D V P + H + E Y++E
Sbjct: 124 QPLAD-AYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLP 182
Query: 79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
+ S RP Y+ G N EE+FF R+V R V +PG G T + HV+DL++ + +
Sbjct: 183 FTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVPGHGQHLTGLGHVKDLATAMAQVIGR 242
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNM 195
E A ++N+ +A+T DG +L A+AAG VEIVHYDPK KKAFP R
Sbjct: 243 -EQAKGQVYNVQHPQAITFDGAVRLAAKAAGKDPESVEIVHYDPKEYDFGKKKAFPMRPQ 301
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLK 250
HF+ A L W E ++ F++ + + FE D+ +L K
Sbjct: 302 HFFTSVEKAMRDLDWTPAYGNTEGWQDSFDQDYALRTHEP--DFECDEVVLAGKK 354
>gi|307104182|gb|EFN52437.1| hypothetical protein CHLNCDRAFT_138964 [Chlorella variabilis]
Length = 324
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 119/244 (48%), Gaps = 40/244 (16%)
Query: 8 FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPDAGH 65
F ++ N N +P+ D K VK ++F+SSAG Y + EP HVEGD K AGH
Sbjct: 111 FDVVYDNNGKNLESCQPLIDHFKGK-VKHYVFVSSAGAYAANSVEPMHVEGDKRKASAGH 169
Query: 66 VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV 125
V VE Y+ E + F+P Y+ G KDCE+WF +RI+R
Sbjct: 170 VAVEGYLEEQQLPYTVFQPLYIYGPHTAKDCEQWFMERILR------------------- 210
Query: 126 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 185
FNL SDR +T DG+ K A AA +IVHY+P G+
Sbjct: 211 ------------------CGHFNLCSDRCITFDGIVKAIAAAASKEAKIVHYNPAEMGLG 252
Query: 186 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKI 245
+ FPFR +HF+A AK +LGW+ N +D+ + +++ GR K F +DDKI
Sbjct: 253 KGEGFPFRAVHFFASSDKAKRVLGWQPQHNFLKDVDQLVKDFQASGRLDKQPDFSVDDKI 312
Query: 246 LESL 249
L ++
Sbjct: 313 LAAV 316
>gi|299115197|emb|CBN74028.1| 38 kDa ribosome-associated protein precursor [Ectocarpus
siliculosus]
Length = 383
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 129/253 (50%), Gaps = 19/253 (7%)
Query: 7 KFKALFRTN-NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH 65
KF A+F N + VAD K V ++F+SSAG+Y ++ PH E D P + H
Sbjct: 126 KFDAVFDMNAREVSDTKAVADVFKGK-VDHYVFMSSAGVYLKSELMPHREEDATDPKSRH 184
Query: 66 ---VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
+ E Y+ E + S RP Y+ G N E++FF+R+ + R V +PG G T +
Sbjct: 185 KGKFESEAYLEEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVPGHGQHLTGL 244
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG---LPVEIVHYDP 179
HV+DL+ + V E+A ++N+ +RA++ DGM + CA+A G V+I H++P
Sbjct: 245 GHVKDLARAMA-NVLGKESAKGQVYNVQDNRAISFDGMVRACAEAMGKDPAAVKIKHFEP 303
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE-EYVKIGRDKKAM- 237
KKAFP R HF+ A L W N + L++ +E ++V KKA
Sbjct: 304 TNFDFGKKKAFPMRPGHFFTSCEKAMTDLDWAPEFNTVDGLRDSYENDFVH----KKAAG 359
Query: 238 ----QFEIDDKIL 246
FE DDK+L
Sbjct: 360 GLNNDFECDDKVL 372
>gi|219128200|ref|XP_002184306.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404107|gb|EEC44055.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 361
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 123/240 (51%), Gaps = 11/240 (4%)
Query: 22 RPVAD-WAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFS 77
+P+A + S +KQ++F+SSAG+Y +DE PH+E D V ++ H ++ E +
Sbjct: 110 KPLASLFVGHSQLKQYVFMSSAGVYLLSDEMPHLETDAVDANSRHKGKLESEACLQALGI 169
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
W SFRP Y+ G GN E +FF+R+ RPV +P G T + HV DL+ + V+
Sbjct: 170 PWCSFRPTYICGPGNYNPVERYFFERLEAGRPVCVPSHGQHLTGLGHVEDLAVAMANVVD 229
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDA-KKAFPFR 193
+ +N+ + +A+T DG+ + A G VEIVHYDP A KAFP R
Sbjct: 230 RHTVTTGKTYNVQNRQAITFDGVVRTAAAVTGRARDSVEIVHYDPGTVEFPAGAKAFPMR 289
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPED-LKERFEEYVKIGRDKKAMQ--FEIDDKILESLK 250
HF+ A L W + E L++ +E + RD ++ F DD +L+ ++
Sbjct: 290 PQHFFCGVERAVQDLEWTPRFDTVEAILRDSYENDFVLLRDSGGLRDDFVCDDIVLQKIQ 349
>gi|254431964|ref|ZP_05045667.1| possible nucleotide sugar epimerase [Cyanobium sp. PCC 7001]
gi|197626417|gb|EDY38976.1| possible nucleotide sugar epimerase [Cyanobium sp. PCC 7001]
Length = 308
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 113/220 (51%), Gaps = 8/220 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSG 91
+F+++SSAG+Y ++ P E P AG + E ++ + + SFRP Y++G G
Sbjct: 89 RFVYVSSAGVYADSELWPLDEDSPTDPASRHAGKAETETWLRQQGIPFTSFRPTYIVGPG 148
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRI+ RPVP+PG G T + HVRDL++ + +E EA+++ I+N
Sbjct: 149 NYNPVERWFFDRILHGRPVPLPGDGSTITQLGHVRDLATAMARCIEV-EASANRIYNCTG 207
Query: 152 DRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT G+ + A+A G VE+ +DP A+KAFP R HF + + L
Sbjct: 208 TKGVTFRGLVEAAARACGQDPAAVEVRSFDPGGLDKKARKAFPLRLAHFLTDTTRVRREL 267
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILES 248
W +L L++ + + R F DD +L +
Sbjct: 268 AWEPAFDLDAILRDSYVHDYAL-RAPVTPDFSTDDALLAA 306
>gi|317970075|ref|ZP_07971465.1| nucleotide sugar epimerase [Synechococcus sp. CB0205]
Length = 306
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 117/219 (53%), Gaps = 10/219 (4%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSG 91
+F+++SSAG+Y + P E P++ H + E +++ + SFRP Y++G+G
Sbjct: 89 RFVYVSSAGVYADSALWPLTENSPTDPESRHSGKLDTEAWLTAEKIPFTSFRPTYIVGAG 148
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV RPVP+PG G T + HV DL++ + L++ +AA++ I+N S
Sbjct: 149 NYNPVESWFFDRIVHGRPVPLPGDGSTITQLGHVNDLATAMALSI-GVDAAANRIYNCSS 207
Query: 152 DRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ ++ G+ A+A G VEI +DP + A+KAFP R HF + + L
Sbjct: 208 AQGISFRGLVAAAARACGKDPASVEIRSFDPSSLDKKARKAFPLRMAHFLTDIHRVQREL 267
Query: 209 GWRSTTNLPEDLKERFE-EYVKIGRDKKAMQFEIDDKIL 246
W ++ L + + +Y K R + F DD++L
Sbjct: 268 AWTPQYDVERSLADSYSNDYAK--RMPTSPDFSSDDQLL 304
>gi|318041621|ref|ZP_07973577.1| nucleotide sugar epimerase [Synechococcus sp. CB0101]
Length = 314
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 110/202 (54%), Gaps = 8/202 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSG 91
+FL++SSAG+Y ++ P E P +G + E +++ + SFRP Y++G+G
Sbjct: 98 RFLYVSSAGVYADSELWPLNEDSPTDPLSRHSGKLDTEAWLTAEKIPFTSFRPTYIVGAG 157
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV RPVP+PG G T + HV DL++ + L++ +AA++ I+N S
Sbjct: 158 NYNPVESWFFDRIVHGRPVPLPGDGSTITQLGHVNDLATAMALSL-GVDAAANRIYNCSS 216
Query: 152 DRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ +T G+ A+A G VEI +DP A+KAFP R HF + + L
Sbjct: 217 VQGITFKGLVAAAARACGKDPASVEIRSFDPAGLDKKARKAFPLRQAHFLTDVTRVQREL 276
Query: 209 GWRSTTNLPEDLKERFE-EYVK 229
W T ++ + L + + +Y K
Sbjct: 277 AWTPTYSVEQALVDSYSNDYAK 298
>gi|428171867|gb|EKX40780.1| hypothetical protein GUITHDRAFT_96197 [Guillardia theta CCMP2712]
Length = 341
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 107/205 (52%), Gaps = 13/205 (6%)
Query: 23 PVADW--AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISE--- 74
P+AD S +K F+++SSAG+YK + E PH+E D V P + H ++ E Y+
Sbjct: 96 PLADLFTTSRSELKSFIYMSSAGVYKKSSEMPHMEHDAVDPKSRHKGKLETEAYLRSLGG 155
Query: 75 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
NF NW S RP Y+ G N E++F +R KR +PG G T HV+DL+ +
Sbjct: 156 NF-NWCSIRPTYICGPQNYNVVEQYFLERADAKRGFIVPGHGEHLTGFGHVKDLAVAMAN 214
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGI-DAKKAF 190
+ + + ++N+ + A+T DG ++ A+ G VEIVHY+PK + KKAF
Sbjct: 215 VIGREKKTNGQVYNIQNTNAITFDGACRVAAEVVGTNPDDVEIVHYNPKEFKFPEGKKAF 274
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTN 215
P R HF+ A+ L W N
Sbjct: 275 PMRPQHFFTNVDKARRDLEWEPMFN 299
>gi|33862792|ref|NP_894352.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9313]
gi|33634708|emb|CAE20694.1| possible mRNA-binding protein [Prochlorococcus marinus str. MIT
9313]
Length = 341
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 104/196 (53%), Gaps = 7/196 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSG 91
+FL++SSAG+Y ++E P E P+ AG Q E ++ + + SFRP Y+ G G
Sbjct: 124 RFLYVSSAGVYADSEEWPLNEESATDPNSRHAGKAQTESWLLQQGIPFTSFRPTYIYGPG 183
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV RPVP+P G T + HV DL+ + ++E E A++ I+N S
Sbjct: 184 NYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEV-ETATNRIYNCSS 242
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
R +T G+ A+A G VE+ +DP A+KAFP R HF + + L
Sbjct: 243 KRGITFRGLIAAAARACGKDPNAVELRSFDPSGLNPKARKAFPLRLSHFLTDITRVEREL 302
Query: 209 GWRSTTNLPEDLKERF 224
W+ +L L++ +
Sbjct: 303 AWQPRFDLETGLEDSY 318
>gi|33240323|ref|NP_875265.1| mRNA binding protein [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237850|gb|AAP99917.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 300
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 118/218 (54%), Gaps = 8/218 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSG 91
+FL++SSAGIY ++ P E V ++ H+ + E ++ + + SFRP Y+ G+G
Sbjct: 83 RFLYVSSAGIYADSETLPLTEDSKVDLESRHIGKAETENWLRLSKVPFTSFRPTYIYGAG 142
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E+WFF+RI+ RP+PIP G T + HV DL+ ++L++E E +++ I+N
Sbjct: 143 NYNPIEKWFFERILNDRPIPIPNEGNTITQLGHVNDLAEAMSLSLEK-EVSNNRIYNCSG 201
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+A+T G+ A A G +++ +DP A+K FP R HF+ + ++ L
Sbjct: 202 KKAITFRGLIYSSALACGKDPNDIKLFSFDPSKIDKKARKIFPLRLNHFFTDISLIENHL 261
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
W L E L+E F+ I +++K F +D ++
Sbjct: 262 NWSPRIELNEGLRESFQNDYLINKNEKP-DFSLDINLI 298
>gi|124023447|ref|YP_001017754.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9303]
gi|123963733|gb|ABM78489.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9303]
Length = 341
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 7/196 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSG 91
+FL++SSAG+Y ++ P E P+ AG Q E ++ + + SFRP Y+ G G
Sbjct: 124 RFLYVSSAGVYADSEHWPLNEESATDPNSRHAGKAQTESWLLQQGIPFTSFRPTYIYGPG 183
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV RPVP+P G T + HV DL+ + ++E E A++ I+N S
Sbjct: 184 NYNPIERWFFDRIVHNRPVPLPRDGTTITQLGHVVDLADAMVRSLEV-ETATNRIYNCSS 242
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
R +T G+ A+A G VE+ +DP A+KAFP R HF + + L
Sbjct: 243 KRGITFRGLIAAAARACGKDPNTVELRSFDPSGLNPKARKAFPLRLSHFLTDITRVEREL 302
Query: 209 GWRSTTNLPEDLKERF 224
W+ +L L++ +
Sbjct: 303 AWQPRFDLETGLEDSY 318
>gi|123968394|ref|YP_001009252.1| mRNA binding protein [Prochlorococcus marinus str. AS9601]
gi|123198504|gb|ABM70145.1| possible mRNA binding protein [Prochlorococcus marinus str. AS9601]
Length = 306
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGS 90
++++++SSAG+YK E P E D + PD+ H + E ++ + + SFRP Y+ G
Sbjct: 88 QRYIYVSSAGVYKDNSELPLSEVDPIDPDSRHKGKFETENWLKKQKIPFTSFRPTYIYGP 147
Query: 91 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 150
GN E WFF+R+ K+ +PIPG G T + HV DL+ ++ + N E + +NI+N
Sbjct: 148 GNYNKIENWFFERLFTKKSIPIPGDGSLITQLGHVSDLTDVMIRCI-NFENSKNNIYNCS 206
Query: 151 SDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 207
++ VT+ G+ CA GL + + +D + ++K FP R H+ + K
Sbjct: 207 GEKGVTIKGLIYFCANVLGLKQNEISLRTFDYQKLDPKSRKGFPIRLNHYQTDISKIKRD 266
Query: 208 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQF-EIDDKIL 246
L W T +L LK+ F V +KK+ +F E D IL
Sbjct: 267 LEWAPTFDLLNGLKDSF---VNDFNNKKSEEFDENSDNIL 303
>gi|77024085|gb|ABA55513.1| chloroplast mRNA binding protein csp41 [Isochrysis galbana]
Length = 313
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 94/169 (55%), Gaps = 4/169 (2%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVEKYISENFSNW 79
+P A AK GV F ++SSAG+Y PA D P E VK G Q E+ + E W
Sbjct: 74 QPYAQAAKDWGVSTFAYVSSAGMYNPAKGDFSPITEECPVK-STGQRQAEEKLGEMELPW 132
Query: 80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
FRPQY+ G K +FFDR+ R P+P+PG G Q ++ H D ++M+ A++N
Sbjct: 133 TCFRPQYVYGPKQGKSYLAYFFDRLTRGAPIPVPGDGNQIVSMTHAADNAAMIATAIDN- 191
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 188
EAA +FN + +T D +A LCA+A G+ +I HYDP A G + K
Sbjct: 192 EAAVGQVFNCATSAVITYDDLALLCARATGVEAKISHYDPAAVGGGSNK 240
>gi|87303508|ref|ZP_01086291.1| Possible nucleotide sugar epimerase [Synechococcus sp. WH 5701]
gi|87281921|gb|EAQ73884.1| Possible nucleotide sugar epimerase [Synechococcus sp. WH 5701]
Length = 308
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 8/218 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSG 91
+F+++SSAG+Y ++ P E P AG + E ++ + + SFRP Y+ G G
Sbjct: 91 RFVYVSSAGVYADSELWPLDEEATTDPASRHAGKLDTEAWLRQQAIPFTSFRPTYIYGPG 150
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV +PVP+PG G T + HV DL++ + L ++ EAA++ I+N
Sbjct: 151 NYNPVESWFFDRIVHGQPVPLPGDGSTITQLGHVSDLATAMALCLDV-EAAANRIYNCSG 209
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT G+ A+A G+ VEI +DP A+KAFP R HF + + L
Sbjct: 210 AKGVTFRGLVAAAAKACGVEPEAVEIRSFDPSGLDKKARKAFPLRLAHFLTDIHRVQREL 269
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
W +L L + + + R F D +L
Sbjct: 270 AWSPAFDLEAGLADSYSNDYAL-RGATTPDFSSDQALL 306
>gi|352094422|ref|ZP_08955593.1| NAD-dependent epimerase/dehydratase [Synechococcus sp. WH 8016]
gi|351680762|gb|EHA63894.1| NAD-dependent epimerase/dehydratase [Synechococcus sp. WH 8016]
Length = 315
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 7/201 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSG 91
+FL++SSAG+Y + + P E + P +G E+++ E + SFRP Y++G G
Sbjct: 97 RFLYVSSAGVYAASTQWPLDETAAIDPASRHSGKADTEQWLQEQGIPFTSFRPTYIVGPG 156
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV RP+P+PGSG T I H DL+ + ++E +AAS+ I+N +
Sbjct: 157 NYNPVERWFFDRIVNDRPIPLPGSGETITQIGHAEDLAEAMARSLEV-DAASNRIYNCSA 215
Query: 152 DRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
R +T G+ + A A G +++ +DP A+KAFP R HF + + L
Sbjct: 216 SRGITFRGLIEAAAVACGRDPKGLDLRPFDPSGLDPKARKAFPLRLSHFLTDTTRVRREL 275
Query: 209 GWRSTTNLPEDLKERFEEYVK 229
W + L + ++ K
Sbjct: 276 AWEPRFDACASLADSYQREYK 296
>gi|78779189|ref|YP_397301.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9312]
gi|78712688|gb|ABB49865.1| mRNA binding protein-like protein [Prochlorococcus marinus str. MIT
9312]
Length = 306
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGS 90
K+++++SSAG+YK E P E D + D+ H V+ E ++ + SFRP Y+ G
Sbjct: 88 KRYIYVSSAGVYKDNHELPLSEDDPIDQDSRHKGKVETENWLINQKIPFTSFRPTYIYGP 147
Query: 91 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 150
GN E WFF+R+ + +PIPG G T + HV DL+ ++ + N E + +NI+N
Sbjct: 148 GNYNKIENWFFERLFSNKSIPIPGDGSLITQLGHVSDLTDVMIRCI-NYEKSKNNIYNCS 206
Query: 151 SDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 207
++ VT+ G+ CA+ GL + + +D + ++K FP R H+ + K
Sbjct: 207 GEKGVTIKGLIYFCAKVLGLNQNEISLRTFDYQKLDPKSRKGFPIRLNHYQTDISKIKSD 266
Query: 208 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEID-DKIL 246
L W +L LK+ F VK KK +F+ + DKIL
Sbjct: 267 LDWEPNFDLLNGLKDSF---VKDFNYKKGEEFDENLDKIL 303
>gi|113955374|ref|YP_730928.1| nucleotide sugar epimerase [Synechococcus sp. CC9311]
gi|113882725|gb|ABI47683.1| Possible nucleotide sugar epimerase [Synechococcus sp. CC9311]
Length = 315
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 7/184 (3%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIG 89
+FL++SSAG+Y + + P E + P +G E+++ E + SFRP Y++G
Sbjct: 95 THRFLYVSSAGVYAASTQWPLDETAAIDPASRHSGKADTEQWLQEQGIPFTSFRPTYIVG 154
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
GN E WFFDRIV RP+P+PGSG T I H DL+ + ++E +AAS+ I+N
Sbjct: 155 PGNYNPVERWFFDRIVNDRPIPLPGSGETITQIGHAEDLAEAMARSLEV-DAASNRIYNC 213
Query: 150 VSDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
+ R +T G+ + A A G +++ +DP A+KAFP R HF + +
Sbjct: 214 SASRGITFRGLIEAAAVACGRDPKSLDLRPFDPSGLDPKARKAFPLRLSHFLTDITRVRR 273
Query: 207 ILGW 210
L W
Sbjct: 274 ELAW 277
>gi|148239500|ref|YP_001224887.1| NAD dependent epimerase/dehydratase [Synechococcus sp. WH 7803]
gi|147848039|emb|CAK23590.1| NAD dependent epimerase/dehydratase [Synechococcus sp. WH 7803]
Length = 307
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 7/182 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSG 91
+FL++SSAG+Y +D P E + P AG + E ++ + SFRP Y++G G
Sbjct: 89 RFLYVSSAGVYAGSDTWPLDEQSPLDPQSRHAGKAETEAWLMREGIPFTSFRPTYIVGPG 148
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV +RPVP+PG G T + HV DL+ + ++E +AA + ++N S
Sbjct: 149 NYNPVERWFFDRIVNQRPVPLPGDGTTITQVGHVEDLAEAMARSLEV-DAACNRVYNCSS 207
Query: 152 DRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
R +T G+ A+A G +++ +DP A+KAFP R HF + + L
Sbjct: 208 HRGITFRGLIAAAAKACGRELADLDLRSFDPSGLDPKARKAFPLRLSHFLTDVSRVEREL 267
Query: 209 GW 210
W
Sbjct: 268 AW 269
>gi|88808654|ref|ZP_01124164.1| possible nucleotide sugar epimerase [Synechococcus sp. WH 7805]
gi|88787642|gb|EAR18799.1| possible nucleotide sugar epimerase [Synechococcus sp. WH 7805]
Length = 307
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 8/220 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSG 91
+FL++SSAG+Y ++ P E + P AG + E ++ + SFRP Y++G G
Sbjct: 89 RFLYVSSAGVYAGSESWPLDEQSPLDPQSRHAGKAETEAWLMREGIPFTSFRPTYIVGPG 148
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV RP+P+PG G T + HV DL+ + ++E +AA + I+N S
Sbjct: 149 NYNPVERWFFDRIVHGRPIPLPGDGTTITQVGHVEDLAEAMARSLEV-DAACNRIYNCSS 207
Query: 152 DRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
R +T G+ A+A G +++ +DP A+KAFP R HF + A+ L
Sbjct: 208 HRGITFRGLIASAAEACGRECADLDLRSFDPSGLDPKARKAFPLRLSHFLTDVSRAEREL 267
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILES 248
W + + + F+ ++ F DD +L +
Sbjct: 268 AWMPRFDAATSMADSFQRDYQLNPTPNP-DFSGDDALLSA 306
>gi|116074757|ref|ZP_01472018.1| Possible nucleotide sugar epimerase [Synechococcus sp. RS9916]
gi|116067979|gb|EAU73732.1| Possible nucleotide sugar epimerase [Synechococcus sp. RS9916]
Length = 335
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 8/202 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSG 91
+FL++SSAG+Y +D+ P E V P AG + E ++ + + SFRP Y++G G
Sbjct: 117 RFLYVSSAGVYAGSDQWPLDEDAAVDPASRHAGKAETEAWLLKEGIPFTSFRPTYIVGPG 176
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDR+ PVP+PG G T + HV DL+ + A+ +AA++ I+N S
Sbjct: 177 NYNPVERWFFDRVFHGLPVPMPGDGSTITQLGHVDDLADAMVRALAV-DAAANRIYNCSS 235
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ +T G+ K A A G V++ H+DP A+KAFP R HF + A+ L
Sbjct: 236 RKGITFAGVVKAAALACGKDPEAVDVRHFDPSGLDPKARKAFPLRLSHFLTDVSRAEREL 295
Query: 209 GWRSTTNLPEDLKERFE-EYVK 229
W + K F+ +Y K
Sbjct: 296 AWSPRYDAITAFKHNFDLDYSK 317
>gi|78184353|ref|YP_376788.1| nucleotide sugar epimerase [Synechococcus sp. CC9902]
gi|78168647|gb|ABB25744.1| possible nucleotide sugar epimerase [Synechococcus sp. CC9902]
Length = 306
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSG 91
+F+++SSAG+Y +D P E P AG E +++ + SFRP Y+ G G
Sbjct: 89 RFVYVSSAGVYAGSDHWPLDENSPTDPKSRHAGKADTEAWLTAEGVPFTSFRPTYIYGPG 148
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV ++PVP+PG G T + HV DL+ + ++ +AA++ I+N
Sbjct: 149 NYNPIERWFFDRIVHEQPVPLPGDGTTITQLGHVDDLAEAMARCIDV-DAAANRIYNCSG 207
Query: 152 DRAVTLDGMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT +G+ + AQA G E V +DP A A+KAFP R HF + + L
Sbjct: 208 KQGVTFEGLIRAAAQACGKDPETVVMQSFDPSALDPKARKAFPLRLNHFLTDITRVEREL 267
Query: 209 GWRSTTNLPEDLKERF 224
W +L L + +
Sbjct: 268 AWHPQFDLAAGLADSY 283
>gi|116070996|ref|ZP_01468265.1| possible nucleotide sugar epimerase [Synechococcus sp. BL107]
gi|116066401|gb|EAU72158.1| possible nucleotide sugar epimerase [Synechococcus sp. BL107]
Length = 306
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSG 91
+F+++SSAG+Y +D P E P AG E +++ + SFRP Y+ G G
Sbjct: 89 RFVYVSSAGVYAGSDHWPLDENSPTDPKSRHAGKADTEAWLTAEGVPFTSFRPTYIYGPG 148
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV ++PVP+PG G T + HV DL+ + ++ +AA++ I+N
Sbjct: 149 NYNPVERWFFDRIVHEQPVPLPGDGTTITQLGHVDDLAEAMARCIDV-DAAANRIYNCSG 207
Query: 152 DRAVTLDGMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ VT +G+ + AQA G + V +DP A A+KAFP R HF + + L
Sbjct: 208 KQGVTFEGLIRAAAQACGKDPQTVVMRSFDPSALDPKARKAFPLRLNHFLTDITRVEREL 267
Query: 209 GWRSTTNLPEDLKERF 224
W +L L + F
Sbjct: 268 AWHPRFDLAAGLADSF 283
>gi|254526226|ref|ZP_05138278.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus str.
MIT 9202]
gi|221537650|gb|EEE40103.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus str.
MIT 9202]
Length = 306
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGS 90
++++++SSAG+YK E P E D + P++ H + E ++ + SFRP Y+ G
Sbjct: 88 QRYIYVSSAGVYKDNCELPLSEVDPIDPESRHKGKFETENWLKNQKIPFTSFRPTYIYGP 147
Query: 91 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 150
GN E WFF+R+ K+ +PIPG G T + HV DL+ ++ + N E + +NI+N
Sbjct: 148 GNYNKIENWFFERLFTKKSIPIPGDGSLITQLGHVSDLTDVMIRCI-NFENSKNNIYNCS 206
Query: 151 SDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 207
++ VT+ G+ CA GL + + +D + ++K FP R H+ + K
Sbjct: 207 GEKGVTIKGLIYFCANVLGLNQNQISLRTFDYQKLDPKSRKGFPIRLNHYQTDISKIKRD 266
Query: 208 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQF-EIDDKIL 246
L W T +L LK+ F V +KK+ +F E D IL
Sbjct: 267 LEWAPTFDLLNGLKDSF---VNDFNNKKSEEFDENSDNIL 303
>gi|427702066|ref|YP_007045288.1| nucleoside-diphosphate-sugar epimerase [Cyanobium gracile PCC 6307]
gi|427345234|gb|AFY27947.1| nucleoside-diphosphate-sugar epimerase [Cyanobium gracile PCC 6307]
Length = 305
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSG 91
+ +++SSAG+Y ++ P E P AG + E ++ + + SFRP Y++G G
Sbjct: 89 RLVYVSSAGVYADSELWPLDEDSPTDPQSRHAGKLDTEAWLRQEGIPFTSFRPTYIVGPG 148
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDR+V RPVP+PG G T + HV DL++ + +E EAA++ I+N
Sbjct: 149 NYNPVESWFFDRLVHGRPVPLPGDGSTITQLGHVADLAAAMARCIEV-EAATNRIYNCTG 207
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ ++ G+ A+A G VE+ +DP A+KAFP R HF + + L
Sbjct: 208 SQGISFRGLVAAAARACGTDPEAVEVRSFDPAGLDKKARKAFPLRLAHFLTDTHRVRREL 267
Query: 209 GWRSTTNLPEDLKERF 224
W +L L + +
Sbjct: 268 AWEPAFDLEATLADSY 283
>gi|157413227|ref|YP_001484093.1| putative mRNA binding protein [Prochlorococcus marinus str. MIT
9215]
gi|157387802|gb|ABV50507.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9215]
Length = 309
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 112/213 (52%), Gaps = 10/213 (4%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGS 90
++++++SSAG+YK E P E D + P++ H + E ++ + SFRP Y+ G
Sbjct: 88 QRYIYVSSAGVYKDNCELPLSEVDPIDPESRHKGKFETENWLKNQKIPFTSFRPTYIYGP 147
Query: 91 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 150
GN E WFF+R+ K+ +PIPG G T + HV DL+ ++ + N E + +NI+N
Sbjct: 148 GNYNKIENWFFERLFTKKSIPIPGDGSLITQLGHVSDLTDVMIRCI-NFENSKNNIYNCS 206
Query: 151 SDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 207
++ VT+ G+ CA GL + + +D + ++K FP R H+ + K
Sbjct: 207 GEKGVTIKGLIYFCANVLGLNQNEISLRTFDYQKLDPKSRKGFPIRLNHYQTDISKIKRD 266
Query: 208 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFE 240
L W T +L LK+ F V +KK+ +F+
Sbjct: 267 LQWAPTFDLLNGLKDSF---VNDFNNKKSEEFD 296
>gi|126696196|ref|YP_001091082.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9301]
gi|126543239|gb|ABO17481.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9301]
Length = 306
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGS 90
++++++SSAG+YK E P E D + P++ H + E ++ + SFRP Y+ G
Sbjct: 88 QRYIYVSSAGVYKDNFELPLSEEDPIDPNSRHKGKFETENWLINQKIPFTSFRPTYIYGP 147
Query: 91 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV 150
GN E WFF+R+ K+ +PIPG G T + HV DL+ ++ + N E + +NI+N
Sbjct: 148 GNYNKIENWFFERLFTKKSIPIPGDGSLITQLGHVSDLTDVMIRCM-NFENSKNNIYNCS 206
Query: 151 SDRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 207
++ VT+ G+ CA GL + + +D + ++K FP R H+ + K
Sbjct: 207 GEKGVTIKGLIYFCANVLGLNKNEISLRTFDYQKLDPKSRKGFPIRLNHYQTDISKIKRD 266
Query: 208 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQF-EIDDKIL 246
L W T +L L++ F VK +KK+ +F E D IL
Sbjct: 267 LEWAPTFDLLNGLRDSF---VKDFNNKKSEEFDENSDHIL 303
>gi|148242110|ref|YP_001227267.1| NAD dependent epimerase/dehydratase [Synechococcus sp. RCC307]
gi|147850420|emb|CAK27914.1| NAD dependent epimerase/dehydratase [Synechococcus sp. RCC307]
Length = 306
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 105/220 (47%), Gaps = 8/220 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSG 91
+ +++SSAG+Y P E P AG + E ++ + SFRP Y+ G G
Sbjct: 89 RLVYVSSAGVYADNARLPLDESAPTDPASRHAGKAETETWLQAEGIPFTSFRPTYIYGPG 148
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV RPVPIPG G T + HV DL++ + +E +AA++ I+N
Sbjct: 149 NYNPVENWFFDRIVHGRPVPIPGDGTTITQLGHVEDLATAMARCLEV-DAAANRIYNCTD 207
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
VT G+ A+A G VE+ +DP A+KAFP R HF + L
Sbjct: 208 THGVTFRGLVAAAARACGKDPEQVELRSFDPSGLDPKARKAFPLRLTHFLTSVERLRKEL 267
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILES 248
W +L L++ + + R + F DD + ++
Sbjct: 268 AWTPQFDLEAGLRDSYSKD-HSQRPAADVDFSRDDSLFQA 306
>gi|78213396|ref|YP_382175.1| nucleotide sugar epimerase [Synechococcus sp. CC9605]
gi|78197855|gb|ABB35620.1| possible nucleotide sugar epimerase [Synechococcus sp. CC9605]
Length = 301
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 7/196 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSG 91
+F+++SSAG+Y +++ P E P AG + E ++ + + SFRP Y+ G G
Sbjct: 84 RFVYVSSAGVYADSEQWPLDESSPTNPQSRHAGKAETEAWLRKEGIPFTSFRPTYIYGPG 143
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV RP+P+PG G T + HV DL+ + +E +AA++ I+N
Sbjct: 144 NYNPVERWFFDRIVHSRPIPLPGDGSTITQLGHVEDLAEAMARCIEV-DAAANRIYNCSG 202
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ ++ G+ + A A G +E+ ++P A+KAFP R HF + + L
Sbjct: 203 KQGISFRGLIRAAAVACGRDPDGLELRSFNPSDLDPKARKAFPLRLNHFLTDITRVEREL 262
Query: 209 GWRSTTNLPEDLKERF 224
W+ + +L + L + +
Sbjct: 263 AWQPSFDLAKGLADSY 278
>gi|87124367|ref|ZP_01080216.1| possible mRNA-binding protein [Synechococcus sp. RS9917]
gi|86167939|gb|EAQ69197.1| possible mRNA-binding protein [Synechococcus sp. RS9917]
Length = 307
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 97/184 (52%), Gaps = 11/184 (5%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKP---DAGHVQVEKYISENFSNWASFRPQYMIGSG 91
+FL++SSAG+Y +++ P E + P AG E ++ + SFRP Y++G G
Sbjct: 89 RFLYVSSAGVYAASEQWPLDEDSALDPASRHAGKAHTEAWLQAEGIPFTSFRPTYIVGPG 148
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML--TLAVENPEAASSNIFNL 149
N E WFF RI PVP+PG G T + HV DL+ + +LAV +AA++ I+N
Sbjct: 149 NYNPIERWFFARIHHGLPVPVPGDGTTITQVGHVEDLAEAMVRSLAV---DAATNRIYNC 205
Query: 150 VSDRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
S R +T +G+ A AAG +++ +DP A+KAFP R HF + +
Sbjct: 206 SSRRGITFNGLVTAAALAAGKEPQSIDVRFFDPSGLDPKARKAFPLRISHFLTDITRVER 265
Query: 207 ILGW 210
L W
Sbjct: 266 ELAW 269
>gi|33865306|ref|NP_896865.1| nucleotide sugar epimerase [Synechococcus sp. WH 8102]
gi|33632475|emb|CAE07287.1| Possible nucleotide sugar epimerase [Synechococcus sp. WH 8102]
Length = 301
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 8/203 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSG 91
+F+++SSAG+Y ++ P E P+ AG E ++ + SFRP Y+ G G
Sbjct: 84 RFVYVSSAGVYAGSELWPLDETAATDPNSRHAGKADTEAWLRAEGIPFTSFRPTYIYGPG 143
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRI RPVP+PG G T + HV DL+ + ++ EAA++ I+N
Sbjct: 144 NYNPVERWFFDRITHDRPVPLPGDGSTITQLGHVDDLAEAMARCIDV-EAAANRIYNCSG 202
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ +T G + A A VE+ +DP A+KAFP R HF + + L
Sbjct: 203 KQGITFRGFIQAAAVACAKDPDAVELRPFDPSGLDPKARKAFPLRLNHFLTDITRVEREL 262
Query: 209 GWRSTTNLPEDLKERFE-EYVKI 230
W+ +L + L + F+ +Y K
Sbjct: 263 AWQPRFDLAKGLADSFQNDYAKT 285
>gi|33861354|ref|NP_892915.1| mRNA binding protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33633931|emb|CAE19256.1| possible mRNA binding protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 306
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 7/207 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEG---DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG 91
+++++SSAG+YK E P E D G + E ++ E + SFRP Y+ G G
Sbjct: 89 RYIYVSSAGVYKDNYELPLSEDSPLDTNSRHKGKFETENWLVEKKIPFTSFRPTYIYGPG 148
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFF+R+ + +PIP G T + HV DLS ++ ++ E + ++I+N
Sbjct: 149 NYNKIENWFFERLFHLKSIPIPADGSLITQLGHVSDLSDVMIKCLD-FEKSKNSIYNCSG 207
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+R VT+ G+ LCA+ GL + + +D + ++K FP R H+ + K+ L
Sbjct: 208 ERGVTIKGLIYLCAEVCGLNKTDIYLNKFDFEKLDPKSRKGFPIRLNHYQTDISKIKNDL 267
Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKK 235
W+ +L LK+ F + + +D K
Sbjct: 268 NWKPKFDLLSGLKDSFIKDYQFKKDNK 294
>gi|123966019|ref|YP_001011100.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9515]
gi|123200385|gb|ABM71993.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9515]
Length = 306
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 7/196 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSG 91
+++++SSAG+YK E P E + P++ H + E ++ + + SFRP Y+ G G
Sbjct: 89 RYIYVSSAGVYKDNYELPLSENAPLDPNSRHKGKFETENWLVKQKIPFTSFRPTYIYGPG 148
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFF+R+ + +PIP G T + HV DLS ++ ++ E + +NI+N
Sbjct: 149 NYNKIENWFFERLFHLKTIPIPADGSLITQLGHVSDLSDVMIRCLD-FEKSKNNIYNCSG 207
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
++ VT+ G+ +CA+ GL + + +D + ++K FP R H+ + K+ L
Sbjct: 208 NKGVTIKGLIYMCAEVCGLNKKDIFLNKFDFQKLDTKSRKNFPIRLNHYQTDISKIKNDL 267
Query: 209 GWRSTTNLPEDLKERF 224
W +L LK+ F
Sbjct: 268 NWEPKFDLLRGLKDSF 283
>gi|260435772|ref|ZP_05789742.1| possible nucleotide sugar epimerase [Synechococcus sp. WH 8109]
gi|260413646|gb|EEX06942.1| possible nucleotide sugar epimerase [Synechococcus sp. WH 8109]
Length = 306
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSG 91
+F+++SSAG+Y ++ P E P AG E ++ + + SFRP Y+ G G
Sbjct: 89 RFVYVSSAGVYADSELWPMDESSPTDPQSRHAGKADTEAWLRKEGIPFTSFRPTYIYGPG 148
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E WFFDRIV RP+P+PG G T + HV DL+ + ++ +AA++ I+N
Sbjct: 149 NYNPVERWFFDRIVHNRPIPLPGDGSTITQLGHVEDLAEAMARCIDV-DAAANRIYNCSG 207
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+ ++ G+ + A A G +E+ ++P+ A+KAFP R HF + + L
Sbjct: 208 KQGISFRGLIRAAAVACGRDPDGLELRSFNPRDLDPKARKAFPLRLNHFLTDITRVEREL 267
Query: 209 GWRSTTNLPEDLKE 222
W+ + +L + L +
Sbjct: 268 AWQPSFDLAKGLAD 281
>gi|77024145|gb|ABA55543.1| chloroplast mRNA binding protein csp41 [Karlodinium micrum]
Length = 428
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 119/226 (52%), Gaps = 6/226 (2%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA 80
RP A+ AK V + ++SSAG+Y P A + + D +G Q E+ + E ++
Sbjct: 204 RPFAELAKKWEVANYAYVSSAGMYTPPAGDYGAISEDASVKSSGQRQAEELLEEMKLPYS 263
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
FRPQY+ G K ++FFDR+ RPV +P G Q + H D ++M+ AV N E
Sbjct: 264 CFRPQYIYGPKQGKSYLKYFFDRLTNGRPVLVPNGGDQQVTMTHAADNAAMIAAAVGN-E 322
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 200
AA+ +FN + +T D + +CA+A G+ +IVHY+PK I K FPFR+ F+
Sbjct: 323 AAAGEVFNCATSTLITYDDLVDICAKAVGVEPKIVHYNPKDFEI-PKGFFPFRDAPFFVS 381
Query: 201 PRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
A D LG+ L D++ F + +++ F +DD+IL
Sbjct: 382 VDKAADKLGFAPKHLLASDIEWYFTNNYQ---SSESLDFSLDDEIL 424
>gi|159903505|ref|YP_001550849.1| mRNA binding protein [Prochlorococcus marinus str. MIT 9211]
gi|159888681|gb|ABX08895.1| possible mRNA binding protein [Prochlorococcus marinus str. MIT
9211]
Length = 323
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 103/196 (52%), Gaps = 7/196 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSG 91
+F++ISSAGIY ++ P E + P++ H+ + E ++ + FRP Y+ G
Sbjct: 108 RFIYISSAGIYSYSESLPVEETSPIDPNSRHIGKAETESWLKNEGIPFTVFRPTYIYGPS 167
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E+WFFDRI + +P+P GM T + HV DL+ + ++++ + A + I+N S
Sbjct: 168 NYNPIEKWFFDRITYSQIIPLPDQGMGLTQLGHVADLARAIKVSLDY-KIAENKIYNCSS 226
Query: 152 DRAVTLDGMAKLCAQAAGL---PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+A+T G+ A+A+G + + ++ A+KAFP R HF+ + + L
Sbjct: 227 AKAITFKGLVYAAAKASGSNKDELRLCSFNTSKLDPKARKAFPLRLPHFFTDTSLIQREL 286
Query: 209 GWRSTTNLPEDLKERF 224
W+ +L L++ +
Sbjct: 287 DWKPIYSLERGLEDSY 302
>gi|72382045|ref|YP_291400.1| mRNA binding protein [Prochlorococcus marinus str. NATL2A]
gi|72001895|gb|AAZ57697.1| possible mRNA-binding protein [Prochlorococcus marinus str. NATL2A]
Length = 307
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEG---DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG 91
+F++ISSAG+Y P E D+ G + E ++ + SFRP Y+ G G
Sbjct: 91 RFIYISSAGVYDNTQLFPVGEDSPIDLASRHIGKAKTESWLKAEGIPFTSFRPTYIYGPG 150
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E+WFFDRI R +P+P G T + HV DL+ + ++E + A++ I+N
Sbjct: 151 NYNPIEKWFFDRITNGRSIPVPLDGQAITQLGHVSDLAEAIAKSLET-DKANNQIYNCSG 209
Query: 152 DRAVTLDGMAKLCAQAAGLPV---EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+AVT G+ + A G V ++ +DP A+K FP R ++F+ + + L
Sbjct: 210 RKAVTFKGLIETAILATGNKVTDFDLRSFDPSKLDPKARKLFPLRLINFFTDTSKIEKDL 269
Query: 209 GWRSTTNLPEDLKERFE 225
W +L L + ++
Sbjct: 270 SWEPKFDLLNGLIDSYK 286
>gi|124025544|ref|YP_001014660.1| mRNA binding protein [Prochlorococcus marinus str. NATL1A]
gi|123960612|gb|ABM75395.1| possible mRNA binding protein [Prochlorococcus marinus str. NATL1A]
Length = 307
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 7/197 (3%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHV---QVEKYISENFSNWASFRPQYMIGSG 91
+F++ISSAG+Y P E + ++ H+ + E ++ + SFRP Y+ G G
Sbjct: 91 RFIYISSAGVYDNTQLFPVGEDGPIDLESRHIGKAKTESWLKAEGIPFTSFRPTYIYGPG 150
Query: 92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 151
N E+WFFDRI R +P+P G T + HV DL+ + ++E + A++ I+N
Sbjct: 151 NYNPIEKWFFDRITNGRSIPVPLDGQAITQLGHVSDLAEAIAKSLET-DKANNQIYNCSG 209
Query: 152 DRAVTLDGMAKLCAQAAGLPV---EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+AVT G+ A G V ++ +DP A+K FP R ++F+ + + L
Sbjct: 210 RKAVTFKGLIDTAILATGNKVTDFDLRSFDPSKLDPKARKLFPLRLINFFTDTSKIEKDL 269
Query: 209 GWRSTTNLPEDLKERFE 225
W +L L + ++
Sbjct: 270 SWEPKFDLLNGLIDSYK 286
>gi|294782079|ref|ZP_06747405.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 1_1_41FAA]
gi|294480720|gb|EFG28495.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 1_1_41FAA]
Length = 310
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVV--KPDAGHVQVEKYISE----------NFSNWAS 81
KQ++ ISSA IY E P E D P G KY++E NF +
Sbjct: 90 KQYILISSASIYTDITESPAKEEDPTGENPAWGDYAKNKYLAEIKTIENSRLYNFK-YTI 148
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
FRP Y+ G GNN D E +FF RI P+ IP G ++ DL+S + LAVEN +
Sbjct: 149 FRPFYIYGIGNNLDRENYFFSRIKYNLPIYIPNKGNNIVQFGYIEDLASAIELAVENSDF 208
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
+FN+ D V + A++C + I H D + I A+ FPFR ++ + +
Sbjct: 209 YGQ-VFNISGDEYVAITEFAEICGKIMNKKSIIKHIDTEEKNIKARDWFPFREVNLFGDI 267
Query: 202 RAAKDILGWRSTTNLPEDLKERFE 225
++ G+R+ +L + L++ ++
Sbjct: 268 SKLENT-GFRNKYSLIKGLEKTYK 290
>gi|340753003|ref|ZP_08689796.1| isoflavone reductase [Fusobacterium sp. 2_1_31]
gi|422317135|ref|ZP_16398500.1| hypothetical protein FPOG_00931 [Fusobacterium periodonticum D10]
gi|229422791|gb|EEO37838.1| isoflavone reductase [Fusobacterium sp. 2_1_31]
gi|404590189|gb|EKA92658.1| hypothetical protein FPOG_00931 [Fusobacterium periodonticum D10]
Length = 310
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVV--KPDAGHVQVEKYISE----------NFSNWAS 81
KQ++ ISSA +Y E P E D P KY++E NF +
Sbjct: 90 KQYILISSASVYTDITESPAKEDDPTGENPAWSDYAKNKYLAEMRTIENSRLYNFK-YTI 148
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
FRP Y+ G GNN D E +FF RI P+ IP G ++ DL+S + LAVEN +
Sbjct: 149 FRPFYIYGIGNNLDRENYFFSRIKYNLPIYIPNKGNNIVQFGYIEDLASAIELAVENSDF 208
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
+FN+ D V + A++C + I H D + I A+ FPFR ++ + +
Sbjct: 209 YGQ-VFNISGDEYVAITEFAEICGKIMNKKSIIKHIDTEEKNIKARDWFPFREVNLFGDI 267
Query: 202 RAAKDILGWRSTTNLPEDLKERFE 225
++ G+R+ +L + L++ ++
Sbjct: 268 SKLENT-GFRNKYSLIKGLEKTYK 290
>gi|218190586|gb|EEC73013.1| hypothetical protein OsI_06939 [Oryza sativa Indica Group]
Length = 812
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 43/53 (81%)
Query: 53 HVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 105
H D VK +AGHV VEKYI+E F +WASFRPQYMIGSGNNKDCEEWFFD I
Sbjct: 12 HAMQDAVKENAGHVSVEKYIAEQFGSWASFRPQYMIGSGNNKDCEEWFFDTIC 64
>gi|358467521|ref|ZP_09177227.1| hypothetical protein HMPREF9093_01706 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357067805|gb|EHI77891.1| hypothetical protein HMPREF9093_01706 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 310
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWAS 81
KQ++ ISSA +Y E P E + G KY++E NF +
Sbjct: 90 KQYILISSASVYTDITESPAKEDSPTGENLAWGDYAKNKYLAEIRTLKNSRLYNFK-YTI 148
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
FRP Y+ G GNN D E +FF RI P+ IP G ++ DL+S + LAVEN +
Sbjct: 149 FRPFYIYGIGNNLDRENYFFSRIKYNLPIYIPNKGNNIVQFGYIEDLASAIELAVENSDF 208
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
IFN+ D + + A++C + I + + + I A+ FPFR ++ + +
Sbjct: 209 YGQ-IFNISGDEYIAVTEFAEICGKIMNKKSIIKYINTEEKKIKARDWFPFREVNLFGDI 267
Query: 202 RAAKDILGWRSTTNLPEDLKERFE 225
++ G+R+ +L + L++ ++
Sbjct: 268 SKLENT-GFRNKYSLIKGLEKTYK 290
>gi|222622705|gb|EEE56837.1| hypothetical protein OsJ_06446 [Oryza sativa Japonica Group]
Length = 899
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 41/46 (89%)
Query: 57 DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 102
D VK +AGHV VEKYI+E F +WASFRPQYMIGSGNNKDCEEWFFD
Sbjct: 3 DAVKENAGHVSVEKYIAEQFGSWASFRPQYMIGSGNNKDCEEWFFD 48
>gi|323451761|gb|EGB07637.1| hypothetical protein AURANDRAFT_27287 [Aureococcus anophagefferens]
Length = 366
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 36 FLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-SENFSNWASFRPQYMIGSGNNK 94
+ F+SSAG+Y A E V P G +VE + +E W +FRPQY+ G NK
Sbjct: 140 YAFVSSAGMYT-AKGILKEEKKVKDPPTGQREVELALEAELAGKWCAFRPQYIYGPYTNK 198
Query: 95 -DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 153
D +WF +R R P+ +P Q ++ H D+++++ V AA+ IFN +++
Sbjct: 199 RDYLDWFLNRAARDIPMAVPADAQQPVSLTHCEDVAALMASVVGKEGAAADQIFNCGTNK 258
Query: 154 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR--NMHFYAEPRAAKDILGW- 210
+ D + A+A G +V P D K +FPFR F R A D+L W
Sbjct: 259 MCSYDDVCIAAAKALGKSEALVVALPP----DTKSSFPFRPNAEGFAVRVRKAMDVLEWP 314
Query: 211 RSTTNLPEDLKERF-EEYVKIGRDK 234
+T ++ DL + E+++ +G DK
Sbjct: 315 GATHDVLADLAGFYTEDFLALGLDK 339
>gi|19704634|ref|NP_604196.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19714936|gb|AAL95495.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 309
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 14/216 (6%)
Query: 21 QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE---- 74
Q + +G KQ++ ISSA +Y + P EG + G KY++E
Sbjct: 77 QVDILHKVMKNGFKQYILISSASVYNNIECTPVNEGCQTGENLIWGDYAKNKYLAEKKTI 136
Query: 75 ---NFSN--WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 129
N N + FRP Y+ G GNN D E +FF RI P+ IP S +V DL+
Sbjct: 137 ENSNLYNFKYTIFRPFYIYGIGNNLDRENYFFSRIKYNLPIFIP-SKNNIIQFGYVEDLA 195
Query: 130 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 189
+ ++EN + + IFN+ D VT+ A++C + I + + + I A+
Sbjct: 196 LAIESSIENSDFYNQ-IFNISGDEYVTMSEFAEICGKVMAKKAVIKYVNTEENKIKARDW 254
Query: 190 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
FPFR ++ + ++ G+R+T +L + L++ ++
Sbjct: 255 FPFREVNLFGNISKLENT-GFRNTYSLIQGLEKTYK 289
>gi|340757555|ref|ZP_08694152.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium varium ATCC
27725]
gi|251834819|gb|EES63382.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium varium ATCC
27725]
Length = 317
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFS---------NWASFR 83
Q++ ISSA IY P E D + G +KY+ E + N+ FR
Sbjct: 91 QYILISSASIYNKMQNYPVKETDSTGANEIWGKYAEDKYLCEKITIENSKKLKFNYTIFR 150
Query: 84 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 143
P Y+ G NN D E + F R+ P+ IP G + ++ DL + +++NP +
Sbjct: 151 PFYIYGPENNLDRESYIFARLENNMPIFIPDKGEERIQFGYIDDLCEAVNFSLDNPHFFN 210
Query: 144 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA 203
IFN+ D ++T+ K+C+ +G I + D + + A+ FPFRN + +
Sbjct: 211 Q-IFNISGDESITIKDYIKMCSLISGKQPLIYNIDLEKENLKARDWFPFRNKNLIGDISK 269
Query: 204 AKDILGWRSTTNLPEDLKERF 224
+ G+R+ +L E LK+ +
Sbjct: 270 IEKT-GFRNKYSLKEGLKKTY 289
>gi|296327911|ref|ZP_06870446.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154867|gb|EFG95649.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 309
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 18/218 (8%)
Query: 21 QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE---- 74
Q + +G KQ++ ISSA +Y + P EG + G KY++E
Sbjct: 77 QVDILHKVMKNGFKQYILISSASVYNNIECTPVNEGCQTGENLIWGDYAKNKYLAEKKTI 136
Query: 75 ---NFSN--WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRD 127
N N + FR Y+ G GNN D E +FF RI P+ IP +QF +V D
Sbjct: 137 ENSNLYNFKYTIFRAFYIYGIGNNLDRENYFFSRIKYNLPIFIPSKNNIIQF---GYVED 193
Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 187
L+ + ++EN + + IFN+ D VT+ A++C + I + + + I A+
Sbjct: 194 LALAIESSIENSDFYNQ-IFNISGDEYVTMSEFAEICGKVMAKKAVIKYVNTEENKIKAR 252
Query: 188 KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
FPFR ++ + + ++ G+R+T +L + L++ ++
Sbjct: 253 DWFPFREVNLFGDISKLENT-GFRNTYSLIQGLEKTYK 289
>gi|340754760|ref|ZP_08691496.1| isoflavone reductase [Fusobacterium sp. D12]
gi|421500006|ref|ZP_15947029.1| NADH(P)-binding protein, PF13460 family [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|313685769|gb|EFS22604.1| isoflavone reductase [Fusobacterium sp. D12]
gi|402269107|gb|EJU18453.1| NADH(P)-binding protein, PF13460 family [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 312
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 10/189 (5%)
Query: 20 LQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE--- 74
LQ + + KQ+++ISSA IY+ P E D + ++ G K++SE
Sbjct: 76 LQVSILLESMKGNYKQYIYISSASIYQEIQNIPAKEEDKIGENSIWGDYAKNKFLSEQEI 135
Query: 75 --NFSN--WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
N N + FRP Y+ G GNN D E + F RI PV +P G + +V DL
Sbjct: 136 PKNIGNAKYTIFRPFYIYGIGNNLDREAYIFKRIEHNLPVYLPNDGKEKIQFGYVEDLVH 195
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
+ + E + IFN+ + V++ +LCA+A VEI ++ + A+ F
Sbjct: 196 AIIYSF-GKEEYYNEIFNVSGEEIVSIKEYVELCAKAMKKAVEIRYFFLEDTKWKARDWF 254
Query: 191 PFRNMHFYA 199
PFRN++ +
Sbjct: 255 PFRNVNLFG 263
>gi|419840604|ref|ZP_14363992.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|386907547|gb|EIJ72254.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
Length = 312
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 10/189 (5%)
Query: 20 LQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE--- 74
LQ + + KQ+++ISSA IY+ P E D + ++ G K++SE
Sbjct: 76 LQVSILLESMKGNYKQYIYISSASIYQEIQNIPAKEEDKIGENSIWGDYAKNKFLSEQEI 135
Query: 75 --NFSN--WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
N N + FRP Y+ G GNN D E + F RI PV +P G + +V DL
Sbjct: 136 PKNIGNAKYTIFRPFYIYGIGNNLDREAYIFKRIEHNLPVYLPNDGKEKIQFGYVEDLVH 195
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
+ + E + IFN+ + V++ +LCA+A VEI ++ + A+ F
Sbjct: 196 AIIYSF-GKEEYYNEIFNVSGEEIVSIKEYVELCAKAMKKAVEIRYFFLEDTKWKARDWF 254
Query: 191 PFRNMHFYA 199
PFRN++ +
Sbjct: 255 PFRNVNLFG 263
>gi|421526822|ref|ZP_15973428.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum ChDC F128]
gi|402256930|gb|EJU07406.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum ChDC F128]
Length = 309
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 18/205 (8%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE-------NFSN--WASF 82
KQ++ ISSA +Y + P E + + G KY++E N N + +
Sbjct: 90 KQYILISSASVYNSIESAPVNEESEIGENLIWGDYAKNKYLAEQKTIENSNLYNFKYTIY 149
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENPE 140
RP Y+ G GNN D E +FF RI P+ IP +QF +V DL+ + ++ N +
Sbjct: 150 RPFYIYGIGNNLDRENYFFSRIKYDLPIYIPSKNNIIQF---GYVEDLALAIESSINNSD 206
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 200
+ IFN+ D VT+ ++CA+ I + D + I + FPFR ++ + +
Sbjct: 207 FYNQ-IFNISGDEYVTMSEFIEICAKVINKKTTIKYVDTAKSQIKVRDWFPFREVNLFGD 265
Query: 201 PRAAKDILGWRSTTNLPEDLKERFE 225
++ G+R+T +L + L++ ++
Sbjct: 266 ISKLEN-TGFRNTYSLVQGLEKTYK 289
>gi|237744159|ref|ZP_04574640.1| isoflavone reductase [Fusobacterium sp. 7_1]
gi|229431388|gb|EEO41600.1| isoflavone reductase [Fusobacterium sp. 7_1]
Length = 309
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE-------NFSN--WASF 82
KQ++ ISSA +Y + P E + G KY++E N N + F
Sbjct: 90 KQYILISSASVYNNIESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFKYTIF 149
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPE 140
RP Y+ G GNN D E +FF RI P+ IP + +QF +V DL+S++ ++EN +
Sbjct: 150 RPFYIYGIGNNLDRENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSD 206
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 200
+ IFN+ + VT+ +++C + I + + + I A+ FPFR ++ + +
Sbjct: 207 FFNQ-IFNISGNEYVTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFREVNLFGD 265
Query: 201 PRAAKDILGWRSTTNLPEDLKERFE 225
++ G+R+ +L + L++ ++
Sbjct: 266 ISKLENT-GFRNMYSLVQGLEKTYK 289
>gi|260494255|ref|ZP_05814386.1| isoflavone reductase [Fusobacterium sp. 3_1_33]
gi|336401276|ref|ZP_08582047.1| hypothetical protein HMPREF0404_01338 [Fusobacterium sp. 21_1A]
gi|260198401|gb|EEW95917.1| isoflavone reductase [Fusobacterium sp. 3_1_33]
gi|336161186|gb|EGN64193.1| hypothetical protein HMPREF0404_01338 [Fusobacterium sp. 21_1A]
Length = 309
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE-------NFSN--WASF 82
KQ++ ISSA +Y + P E + G KY++E N N + F
Sbjct: 90 KQYILISSASVYNNIESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFKYTIF 149
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPE 140
RP Y+ G GNN D E +FF RI P+ IP + +QF +V DL+S++ ++EN +
Sbjct: 150 RPFYIYGIGNNLDRENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSD 206
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 200
+ FN+ + VT+ +++C + I + + + I A+ FPFR ++ + +
Sbjct: 207 FYNQ-TFNISGNEYVTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFREVNLFGD 265
Query: 201 PRAAKDILGWRSTTNLPEDLKERFE 225
++ G+R+ +L + L++ ++
Sbjct: 266 ISKLENT-GFRNMYSLVQGLEKTYK 289
>gi|423137043|ref|ZP_17124686.1| hypothetical protein HMPREF9942_00824 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371961110|gb|EHO78753.1| hypothetical protein HMPREF9942_00824 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 309
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE-------NFSN--WASF 82
KQ++ ISSA +Y + P E + G KY++E N N + F
Sbjct: 90 KQYILISSASVYNNIESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFKYTIF 149
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPE 140
RP Y+ G GNN D E +FF RI P+ IP + +QF +V DL+S++ ++EN +
Sbjct: 150 RPFYIYGIGNNLDRENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSD 206
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 200
+ FN+ + VT+ +++C + I + + + I A+ FPFR ++ + +
Sbjct: 207 FYNQ-TFNISGNEYVTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFREVNLFGD 265
Query: 201 PRAAKDILGWRSTTNLPEDLKERFE 225
++ G+R+ +L + L++ ++
Sbjct: 266 ISKLENT-GFRNMYSLVQGLEKTYK 289
>gi|336418685|ref|ZP_08598957.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 11_3_2]
gi|336164362|gb|EGN67269.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 11_3_2]
Length = 309
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE-------NFSN--WASF 82
KQ++ ISSA +Y + P E + G KY++E N N + F
Sbjct: 90 KQYILISSASVYNNIESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFKYTIF 149
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPE 140
RP Y+ G GNN D E +FF RI P+ IP + +QF +V DL+S++ ++EN +
Sbjct: 150 RPFYIYGIGNNLDRENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSD 206
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 200
+ FN+ + VT+ +++C + I + + + I A+ FPFR ++ + +
Sbjct: 207 FYNQ-TFNISGNEYVTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFREVNLFGD 265
Query: 201 PRAAKDILGWRSTTNLPEDLKERFE 225
++ G+R+ +L + L++ ++
Sbjct: 266 ISKLENT-GFRNMYSLVQGLEKTYK 289
>gi|254302849|ref|ZP_04970207.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148323041|gb|EDK88291.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 309
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 34 KQFLFISSAGIYK-----PADEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWAS 81
KQ++ ISSA IY P +E +++ D A + +E NF +
Sbjct: 90 KQYILISSASIYNNIKCTPVNEENQTGENLIWGDYAKNKYLAEKITIENSNLHNFK-YTI 148
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENP 139
FRP Y+ G GNN D E +FF RI PV IP +QF ++ DL + ++EN
Sbjct: 149 FRPFYIYGIGNNLDRENYFFSRIKYNLPVFIPSKNNIIQF---GYIEDLVLAIESSIENS 205
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
+ + IFN+ + VT+ ++C + I + + + I A+ FPFR ++ +
Sbjct: 206 DFYNQ-IFNISGNEYVTMSEFVEICGKVINKKAMIEYINTEENKIKARDWFPFREVNLFG 264
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFE 225
+ ++ G+R+T +L + L++ ++
Sbjct: 265 DISKLENT-GFRNTYSLVQGLEKTYK 289
>gi|289765685|ref|ZP_06525063.1| LOW QUALITY PROTEIN: isoflavone reductase [Fusobacterium sp. D11]
gi|289717240|gb|EFD81252.1| LOW QUALITY PROTEIN: isoflavone reductase [Fusobacterium sp. D11]
Length = 300
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE-------NFSN--WASF 82
KQ++ ISSA +Y + P E + G KY++E N N + F
Sbjct: 81 KQYILISSASVYNNIESTPVNEDSQTGENLLWGEYSKNKYLAEKKTIENSNLYNFKYTIF 140
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP--GSGMQFTNIAHVRDLSSMLTLAVENPE 140
RP Y+ G GNN D E +FF RI P+ IP + +QF +V DL+S++ ++EN +
Sbjct: 141 RPFYIYGIGNNLDRENYFFSRIKYNLPIYIPSKNNTIQF---GYVEDLASVIENSMENSD 197
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 200
+ FN+ + VT+ +++C + I + + + I A+ FPFR ++ + +
Sbjct: 198 FYNQ-TFNISGNEYVTMSEFSEICGKVMSKKAIIKYINTEEKKIKARDWFPFREVNLFGD 256
Query: 201 PRAAKDILGWRSTTNLPEDLKERFE 225
++ G+R+ +L + L++ ++
Sbjct: 257 ISKLENT-GFRNMYSLVQGLEKTYK 280
>gi|422338333|ref|ZP_16419293.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355372971|gb|EHG20310.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 309
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 34 KQFLFISSAGIYK-----PADEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWAS 81
KQ++ ISSA IY P +E +++ D A + +E NF +
Sbjct: 90 KQYILISSASIYNNIKCTPVNEENQTGENLIWGDYAKNKYLAEKITIENSNLHNFK-YTI 148
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAVENP 139
FRP Y+ G GNN D E +FF RI PV IP +QF +V DL+ + +++N
Sbjct: 149 FRPFYIYGIGNNLDRENYFFSRIKYNLPVFIPSKNNIIQF---GYVEDLALAIESSIDNS 205
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
+ + IFN+ + VT+ ++C + I + + + I A+ FPFR ++ +
Sbjct: 206 DFYNQ-IFNISGNEYVTMSEFVEICGKVINKKAMIEYINTEENKIKARDWFPFREVNLFG 264
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFE 225
+ ++ G+R+T +L + L++ ++
Sbjct: 265 DISKLENT-GFRNTYSLVQGLEKTYK 289
>gi|237742294|ref|ZP_04572775.1| isoflavone reductase [Fusobacterium sp. 4_1_13]
gi|256845573|ref|ZP_05551031.1| isoflavone reductase [Fusobacterium sp. 3_1_36A2]
gi|421145378|ref|ZP_15605256.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|229429942|gb|EEO40154.1| isoflavone reductase [Fusobacterium sp. 4_1_13]
gi|256719132|gb|EEU32687.1| isoflavone reductase [Fusobacterium sp. 3_1_36A2]
gi|395488227|gb|EJG09104.1| dTDP-glucose 4,6-dehydratase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 309
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 34 KQFLFISSAGIYK-----PADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSN 78
KQ++ ISSA +Y PA+E +++ D KY++E NF
Sbjct: 90 KQYILISSASVYNNIESTPANEESQTGENLIWGDYAK---NKYLAEKKTIENSKIYNFK- 145
Query: 79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAV 136
+ FRP Y+ G GNN D E +FF RI P+ IP +QF +V DL+ + ++
Sbjct: 146 YTIFRPFYIYGVGNNLDRENYFFSRIKYNLPIYIPSKNNIIQF---GYVEDLALAIESSI 202
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 196
N + + FN+ D VT+ +++C + I + + + I A+ FPFR ++
Sbjct: 203 GNSDFYNQT-FNISGDEYVTMSEFSEICGKVMNKKAIIKYINTEENKIKARDWFPFREVN 261
Query: 197 FYAEPRAAKDILGWRSTTNLPEDLKERFE 225
+ + ++ G+R+T +L + L++ ++
Sbjct: 262 LFGDISKLEN-TGFRNTYSLIQGLEKTYK 289
>gi|373497022|ref|ZP_09587563.1| hypothetical protein HMPREF0402_01436 [Fusobacterium sp. 12_1B]
gi|371964329|gb|EHO81853.1| hypothetical protein HMPREF0402_01436 [Fusobacterium sp. 12_1B]
Length = 316
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 16/228 (7%)
Query: 19 RLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENF 76
R Q + + Q++ ISSA IY P E D + G +KY+SE
Sbjct: 75 RDQASLIQEVMTGKYSQYILISSASIYNDMKHIPAKETDNTGANEVWGKYAEDKYLSEKI 134
Query: 77 S---------NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 127
+ + FRP Y+ G NN D E + F R PV IP G + ++ D
Sbjct: 135 TIENAEKLNFKYTIFRPFYIYGPENNLDRESYMFARFENNMPVFIPDKGEEIIQFGYIDD 194
Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 187
L + ++ N + + IFN+ + +T+ A+LC+ I + D + + A+
Sbjct: 195 LCEAVNFSLGNSDFFNQ-IFNISGNERITIKDYAELCSNICNKKPMIQYIDLEKENLKAR 253
Query: 188 KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 235
FPFRN + + G+++ +L E L+E Y+ + ++KK
Sbjct: 254 DWFPFRNENLIGDISKITKT-GFKNKYSLEEGLRET---YLHLKKNKK 297
>gi|262068102|ref|ZP_06027714.1| dTDP-glucose 4,6-dehydratase [Fusobacterium periodonticum ATCC
33693]
gi|291378188|gb|EFE85706.1| dTDP-glucose 4,6-dehydratase [Fusobacterium periodonticum ATCC
33693]
Length = 249
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE----------NFSNWAS 81
KQ++ ISSA +Y E P E + G KY++E NF +
Sbjct: 90 KQYILISSASVYTDITESPAKEDSPTGENLAWGDYAKNKYLAEKRTIENSELYNFK-YTI 148
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
FRP Y+ G GNN D E +FF RI P+ IP G ++ DL+S + LAVEN +
Sbjct: 149 FRPFYIYGVGNNLDRENYFFSRIKYNLPIYIPNKGNNIVQFGYIEDLASAIELAVENSDF 208
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
IFN+ D V + A++C + I H D +
Sbjct: 209 YGQ-IFNISGDEYVAITEFAEICGKIMNKKSIIKHIDTE 246
>gi|302873783|ref|YP_003842416.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
gi|307689977|ref|ZP_07632423.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
gi|302576640|gb|ADL50652.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
Length = 322
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 19 RLQRPVA-DWAKSSGVKQFLFISSAGIYKPAD-EPPHVEGDVVKPD-------AGHVQVE 69
RLQ + D +KQFLFISS+ +Y + P+ E +K + A ++ E
Sbjct: 77 RLQAEILYDSLNKENLKQFLFISSSAVYDVENFSIPYNEETPLKENKYWTAYGANKIEAE 136
Query: 70 KYISENF----SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV 125
++ E+F +N RP Y+ G N E + F+ I RP+ IP SG + +
Sbjct: 137 SFLIESFQQTKTNLIIIRPPYVYGENNYAQRESFIFEHICSDRPIIIPNSGNTYLQFIYT 196
Query: 126 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 185
DL++++ L + N + + +IFN+ + ++ T+ + C AG I+ YD K
Sbjct: 197 TDLANII-LTLLNAKLDTISIFNVGNKKSFTIKEWIECCENVAGKKARIIEYDYKKYNRC 255
Query: 186 AKKAFPF 192
+ FPF
Sbjct: 256 VRDFFPF 262
>gi|34763307|ref|ZP_00144264.1| Isoflavone reductase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887030|gb|EAA24145.1| Isoflavone reductase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 309
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 32/212 (15%)
Query: 34 KQFLFISSAGIYK-----PADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSN 78
KQ++ ISSA +Y PA+E +++ D KY++E NF
Sbjct: 90 KQYILISSASVYNNIESTPANEESQTGENLIWGDYAK---NKYLAEKKTIENSKIYNFK- 145
Query: 79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAV 136
+ FRP Y+ G GNN D E +FF RI P+ IP +QF +V D L LA+
Sbjct: 146 YTIFRPFYIYGVGNNLDRENYFFSRIKYNLPIYIPSKNNIIQF---GYVED----LVLAI 198
Query: 137 ENPEAAS---SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
E+ S + FN+ D VT+ +++C + I + + + I A+ FPFR
Sbjct: 199 ESSIGNSDFYNQTFNISGDEYVTMSEFSEICGKVMNKKAIIKYINTEENKIKARDWFPFR 258
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
++ + + ++ G+R+T +L + L++ ++
Sbjct: 259 EVNLFGDISKLEN-TGFRNTYSLIQGLEKTYK 289
>gi|407474175|ref|YP_006788575.1| NAD-dependent epimerase/dehydratase family protein [Clostridium
acidurici 9a]
gi|407050683|gb|AFS78728.1| NAD-dependent epimerase/dehydratase family protein [Clostridium
acidurici 9a]
Length = 312
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 33 VKQFLFISSAGIYKPADEP---PHVEGDVVKPDAGHVQVEKYISENFSN-----WASFRP 84
+K+++F SS +Y+P+ + +G+ + G ++K +E+F + FRP
Sbjct: 92 LKKYVFCSSGAVYEPSSDTIKESFKKGE--NSNWGKYGIDKKEAEDFIINSGIPYTIFRP 149
Query: 85 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 144
Y+ G NN E +FFDRI+ + +PIP T H+ DL + + N +SS
Sbjct: 150 PYIYGENNNLYREIYFFDRIINNKEIPIPFGKDTKTQFIHINDLVRIFESVMYN--ESSS 207
Query: 145 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA 204
NI+N+ + ++ D C + G + D ++++ FPFR++ + +
Sbjct: 208 NIYNVTNPELISWDYFIAKCGEVIGKTPIMKKIDVNQVKLESRSYFPFRDVTYVLDTEQL 267
Query: 205 KDILGWRSTTNLPEDLKERFEEYV 228
++ T +L E LK +E Y+
Sbjct: 268 MKSKLYKPTISLEEGLKRAYEWYI 291
>gi|121077622|gb|ABM47306.1| chloroplast ribosome-associated protein [Volvox carteri f.
nagariensis]
Length = 206
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 33 VKQFLFISSAGIYKP-ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG 91
V ++F+SSAG YK + EP HVEGD K AGHV+VE Y+ + + F+P Y+ G
Sbjct: 132 VDHYVFVSSAGAYKADSIEPMHVEGDARKSTAGHVEVEAYLEKARVPYTVFQPLYIYGPN 191
Query: 92 NNKDCEEWFFDRIVR 106
KDCE+WF DRI+R
Sbjct: 192 TAKDCEQWFVDRIIR 206
>gi|404367032|ref|ZP_10972408.1| hypothetical protein FUAG_02097 [Fusobacterium ulcerans ATCC 49185]
gi|313689747|gb|EFS26582.1| hypothetical protein FUAG_02097 [Fusobacterium ulcerans ATCC 49185]
Length = 316
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 16/228 (7%)
Query: 19 RLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENF 76
R Q + + Q++ ISSA IY P E D + G +KY+SE
Sbjct: 75 RDQASLIQEVMTGKYSQYILISSASIYNDMKHIPAKETDNTGANEVWGKYAEDKYLSEKI 134
Query: 77 S---------NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 127
+ + FRP Y+ NN D E + F R PV IP G + ++ D
Sbjct: 135 TIENAEKLNFKYTIFRPFYIYDPENNLDRESYMFARFENNMPVFIPDKGEEIIQFGYIDD 194
Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 187
L + ++ N + + IFN+ + +T+ A+LC+ I + D + + A+
Sbjct: 195 LCEAVNFSLGNSDFFNQ-IFNISGNERITIKDYAELCSNICNKKPMIQYIDLEKENLKAR 253
Query: 188 KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 235
FPFRN + + G+++ +L E L+E Y+ + ++KK
Sbjct: 254 DWFPFRNENLIGDISKITKT-GFKNKYSLEEGLRET---YLHLKKNKK 297
>gi|294785138|ref|ZP_06750426.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_27]
gi|294486852|gb|EFG34214.1| dTDP-glucose 4,6-dehydratase [Fusobacterium sp. 3_1_27]
Length = 309
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 34 KQFLFISSAGIYK-----PADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSN 78
KQ++ ISSA +Y PA+E +++ D KY++E NF
Sbjct: 90 KQYILISSASVYNNIESTPANEESQTGENLIWGDYAK---NKYLAEKKTIENSKIYNFK- 145
Query: 79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG--MQFTNIAHVRDLSSMLTLAV 136
+ FRP + G GNN D E +FF RI P+ IP +QF +V DL+ + ++
Sbjct: 146 YTIFRPFNIYGVGNNLDRENYFFSRIKYNLPIYIPSKNNIIQF---GYVEDLALAIESSI 202
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 196
N + + FN+ D VT+ +++C + I + + + I A+ FPFR ++
Sbjct: 203 GNSDFYNQT-FNISGDEYVTMSEFSEICGKVMNKKAIIKYINTEENKIKARDWFPFREVN 261
Query: 197 FYAEPRAAKDILGWRSTTNLPEDLKERFE 225
+ + ++ G+R+T +L + L++ ++
Sbjct: 262 LFGDISKLEN-TGFRNTYSLIQGLEKTYK 289
>gi|373111975|ref|ZP_09526210.1| hypothetical protein HMPREF9466_00243 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|371656543|gb|EHO21868.1| hypothetical protein HMPREF9466_00243 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
Length = 264
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 20 LQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISE--- 74
LQ + + KQ+++ISSA IY+ P E D + ++ G K++SE
Sbjct: 76 LQVSILLESMKGNYKQYIYISSASIYQKIQNIPAEEEDKIGENSIWGDYAKNKFLSEQEI 135
Query: 75 --NFSN--WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
N N + FRP Y+ G GNN D E + F RI PV +P G + +V DL
Sbjct: 136 PKNIGNAKYTIFRPFYIYGIGNNLDREAYIFKRIEHNLPVYLPNDGKEKIQFGYVEDLVH 195
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 177
+ + E + IFN+ + V++ +LCA+A VEI ++
Sbjct: 196 AIIYSF-GKEEYYNEIFNVSGEEIVSIKEYVELCAKAMKKAVEIRYF 241
>gi|338746092|emb|CCC15095.1| putative chloroplast mRNA binding protein csp41 [Lepidodinium
chlorophorum]
Length = 223
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 34 KQFLFISSAGIYKPADEPPHVE-GDVVKPDAGHVQVEKYISENF-SNWASFRPQYMIGSG 91
K + FISSAG+Y + VE GDV P G +VE + +N WASFRPQY+ G
Sbjct: 114 KLYSFISSAGMYTAKGQ--LVENGDVKDPPTGQRKVELSLEKNLPGRWASFRPQYIYGPY 171
Query: 92 NNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
NK +WF +R + P+ +PG Q N+AH D++ +L+ + +AA
Sbjct: 172 TNKRGYLDWFLERAAQSLPMGVPGDASQPVNLAHCEDVAELLSSVIGKEQAA 223
>gi|296242085|ref|YP_003649572.1| NAD-dependent epimerase/dehydratase [Thermosphaera aggregans DSM
11486]
gi|296094669|gb|ADG90620.1| NAD-dependent epimerase/dehydratase [Thermosphaera aggregans DSM
11486]
Length = 335
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 101/249 (40%), Gaps = 33/249 (13%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--DAGHVQV--EKYI 72
N + +A+ A GVK+F++ SS P D PP E P D G ++ E+ I
Sbjct: 90 NVDATKILAEQALKHGVKRFIYCSSTEAIGPVDNPPGDEETPPNPQFDYGRSKLLAEQKI 149
Query: 73 SENFSNWASF---RPQYMIGSGNNKDCEEWFFDRIVR-----KRPVPIPGSGMQFTNIAH 124
E +N S+ RP + G GN D WF + K + GSG AH
Sbjct: 150 KEIAANGLSYTIIRPSGLYGPGNVNDVSYWFITSFAKGGFFSKFKI---GSGETLIQFAH 206
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
V D++ L VE E + + +F L DRA T + + K+ ++ G P PK A +
Sbjct: 207 VDDVAKGFALVVERLEKSENQVFILSEDRAYTYNEVYKILSEITGNPPPKYSLSPKMAKL 266
Query: 185 DAKKAFPF------------RNM------HFYAEPRAAKDILGWRSTTNLPEDLKERFEE 226
+ RN+ H AK +LG+ NL E LKE E
Sbjct: 267 ILSFTHLYALVKGDNNILLRRNIVDSIAKHRAYSVEKAKRLLGYSPRYNLKEGLKETIEW 326
Query: 227 YVKIGRDKK 235
Y G KK
Sbjct: 327 YRLKGYIKK 335
>gi|376004404|ref|ZP_09782113.1| mRNA-binding protein (fragment) [Arthrospira sp. PCC 8005]
gi|375327218|emb|CCE17866.1| mRNA-binding protein (fragment) [Arthrospira sp. PCC 8005]
Length = 108
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 146 IFNLVSDRAVTLDGMAKLCAQAAGLP---VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 202
++N+ DR VT DG+AK CA AAG ++++HYDPK +KAFP R HF+A+
Sbjct: 1 MYNISGDRFVTFDGLAKACAIAAGESPDDLQLIHYDPKNFDFGKRKAFPLRVQHFFADVH 60
Query: 203 AAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILES 248
A + L W+ +L LK+ + ++ + F DD+I+++
Sbjct: 61 KAINQLNWQPKYDLISGLKDSCQNDYLANSNQGEVDFSTDDEIIKA 106
>gi|359411732|ref|ZP_09204197.1| NAD-dependent epimerase/dehydratase [Clostridium sp. DL-VIII]
gi|357170616|gb|EHI98790.1| NAD-dependent epimerase/dehydratase [Clostridium sp. DL-VIII]
Length = 311
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 14/206 (6%)
Query: 31 SGVKQFLFISSAGIYKPADE---PPHVEGDVVKPDAGHVQVEKYISENFSN-----WASF 82
S +K+++F SS +Y ++ GD P+ G+ +K +E+F + F
Sbjct: 90 SSLKKYIFCSSGAVYTETNDFANESFERGD--NPNWGNYGTDKKEAEDFIVTSKIPYIIF 147
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
RP Y+ G NN E +FFDRI + +P+P T H+ DL + + N +
Sbjct: 148 RPTYIYGENNNLYREAYFFDRIKESKVIPMPYGNNTVTQFIHIEDLVKVFESVMFNEKIC 207
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP- 201
I+N+ + V+ + + +C + + I D + ++ + FPFR++ +
Sbjct: 208 R--IYNVTNSDIVSFEELILMCGKVLKIDPIIKKIDTQKIKVNTRTYFPFRDVTYLLNTE 265
Query: 202 RAAKDILGWRSTTNLPEDLKERFEEY 227
R D L T +L E L++ ++ Y
Sbjct: 266 RLINDDLH-NPTISLEEGLRKTYKWY 290
>gi|255647281|gb|ACU24107.1| unknown [Glycine max]
Length = 208
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/34 (94%), Positives = 32/34 (94%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE 55
RPV DWAKSSGVKQFLFISSAGIYKP DEPPHVE
Sbjct: 171 RPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVE 204
>gi|414153381|ref|ZP_11409708.1| putative UDP-glucose 4-epimerase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411455763|emb|CCO07611.1| putative UDP-glucose 4-epimerase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 306
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYIS---ENFS-NW 79
+ GV + +F SSA +Y P E P +G+ VEKY++ E + W
Sbjct: 103 CRQHGVAKIVFASSAAVYGTPRCLPLDESHPAAPLSGYGVAKYAVEKYLAAYGELYGLRW 162
Query: 80 ASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
+ R + G + E F DR++R++P I G G Q + +V+D+++ LA
Sbjct: 163 TALRYANVYGPRQDAQGEGGVVAIFIDRLLRRQPAVIFGDGQQTRDFVYVKDVAAANLLA 222
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 195
+E + I N+ + RAVT+ + +L Q +E V+ P+ I +
Sbjct: 223 MERGD---GRILNISTGRAVTVQQLYQLIRQQTASHLEPVYRPPRPGDI----------V 269
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
H Y + RAA LGW+ +L + L+E Y+
Sbjct: 270 HSYLDNRAAVACLGWQPRYDLADGLRETVAYYL 302
>gi|326203132|ref|ZP_08192998.1| NAD-dependent epimerase/dehydratase [Clostridium papyrosolvens DSM
2782]
gi|325986778|gb|EGD47608.1| NAD-dependent epimerase/dehydratase [Clostridium papyrosolvens DSM
2782]
Length = 339
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 25/243 (10%)
Query: 33 VKQFLFISSAGIYK-------------PADEPPHVEGDVVKPDAGHVQVEKYISENFSNW 79
+KQ++F S+ +Y P P + ++ + EK + N
Sbjct: 90 IKQYIFCSTVSVYDFDKIKSFPIKEDFPLKTDPESWNNEIRYGSKKALCEKVLMSNGKFP 149
Query: 80 ASF-RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
+ RP Y+ G D E+FF+RI +R VPI G ++ DL+ + AV N
Sbjct: 150 VTIIRPCYVYGPNAYGDRVEFFFNRIGDERIVPILPIGNNVMQFIYISDLADLFVSAVNN 209
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP-KAAGI----DAKKAFPFR 193
+ A + I+N + + T+ LC + G I +D K GI + P +
Sbjct: 210 -QKAYNRIYNAAGEESTTIFNFINLCEEIIGKKANIRVFDAEKLTGILDEEELAGIIPTK 268
Query: 194 NMH--FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKV 251
H FY + A L W+ T L E LKE ++ + ++++ + + ID+K+L+ L
Sbjct: 269 LYHISFYFDNLKAIRDLDWKPKTTLYEGLKETYDWH---RQNRREVDYCIDEKLLKLLNG 325
Query: 252 PIP 254
IP
Sbjct: 326 SIP 328
>gi|374333250|ref|YP_005083434.1| NAD-dependent epimerase/dehydratase [Pseudovibrio sp. FO-BEG1]
gi|359346038|gb|AEV39412.1| NAD-dependent epimerase/dehydratase [Pseudovibrio sp. FO-BEG1]
Length = 295
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 9/232 (3%)
Query: 6 AKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPA-----DEPPHVEGDVVK 60
+++A+ T+ R Q +A K+++ +SSA +YK E + G V
Sbjct: 47 GRYEAVIDTSAYTREQSEIAFNTFGIHAKKWIHLSSAAVYKETKGHLPSEKDSIGGASVW 106
Query: 61 PDAGHVQVEK---YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 117
G + E +++ + + RP Y+ G N+ D E++ + R + +RP+ +PG G
Sbjct: 107 GAYGRDKSEADHFLLNQEHTPAVAIRPPYLYGPNNDIDREQFVWARALTERPIILPGDGQ 166
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 177
H DL+S + L + A + NL +T++ ++ + EI++
Sbjct: 167 TKLQFLHEEDLASFI-LYLLAMHAMPTEAVNLADPHILTIEKWVRMLCDIVEVEPEIIYG 225
Query: 178 DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
A GI A++ FPFR+ + + W+ L E F+ Y +
Sbjct: 226 KDMAPGIPAREYFPFRDYDCALDVTRYLENFDWQPQYKLREGFTHTFKSYTR 277
>gi|291542750|emb|CBL15860.1| Nucleoside-diphosphate-sugar epimerases [Ruminococcus bromii L2-63]
Length = 300
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 31 SGVK--QFLFISSAGIYKPADEPPHVEGDVVKPDA-------GHVQVEKYISENFSNWAS 81
SGV ++FISS+ +Y + P E ++ + EKY+ + N
Sbjct: 80 SGVSFDDYIFISSSAVYPETNPQPFAENQTCGKNSVWGDYGINKLNAEKYLLDTVQNAYI 139
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG---MQFTNIAHVRDLSSMLTLAVEN 138
RP Y G N E + FD + R IP +G +QF N++ DL + + +E
Sbjct: 140 LRPPYFYGMYENLYREAFPFDCAILDRKFYIPENGDMKLQFFNVS---DLCKFIEIIIE- 195
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 198
+ S++IFN+ + VT+ +LC + AG VE V + I + F F + +
Sbjct: 196 -KHPSNHIFNVGNKETVTIKEWVELCYKVAGREVEFV---SVSKDIPQRDYFCFYDYEYV 251
Query: 199 AEPRAAKDILGWRSTTNLPEDLKERFEEY 227
+ R +++ +T +L + LKE FE Y
Sbjct: 252 LDVRKQNELMP--NTVSLYDGLKEEFEWY 278
>gi|254472988|ref|ZP_05086386.1| NAD dependent epimerase/dehydratase family protein [Pseudovibrio
sp. JE062]
gi|211957709|gb|EEA92911.1| NAD dependent epimerase/dehydratase family protein [Pseudovibrio
sp. JE062]
Length = 295
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 9/232 (3%)
Query: 6 AKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPA-----DEPPHVEGDVVK 60
+++A+ T+ R Q +A K+++ +SSA +YK E + G V
Sbjct: 47 GRYEAVIDTSAYTREQSEIAFDTFGIHAKKWIHLSSAAVYKETKGHLPSEKDSIGGASVW 106
Query: 61 PDAGHVQVEK---YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 117
G + E +++ + + RP Y+ G N+ D E++ + R + +RP+ +PG G
Sbjct: 107 GAYGRDKSEADHFLLNQEHTPAVAIRPPYLYGPNNDIDREQFVWARALTERPIILPGDGQ 166
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 177
H DL+S + L + A + NL +T++ ++ + EI++
Sbjct: 167 TKLQFLHEEDLASFI-LYLLAMHAMPTEAVNLADPHILTIEKWVRMLCDIVEVEPEIIYG 225
Query: 178 DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
A GI A++ FPFR+ + + W+ L E F+ Y +
Sbjct: 226 KDMAPGIPAREYFPFRDYDCALDVTRYLENFDWQPQYKLREGFTHTFKSYTR 277
>gi|331087319|ref|ZP_08336388.1| hypothetical protein HMPREF0987_02691 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408410|gb|EGG87881.1| hypothetical protein HMPREF0987_02691 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 301
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWA 80
A+ G ++ ISS+ +Y P E V K + ++ E+Y+ E +
Sbjct: 81 AELKGFSTYILISSSAVYPETLPQPFSEEQPVGYNSIWRKYGSDKIEAEEYLMEKVPDAY 140
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN-P 139
RP Y+ GS N+ E + FD ++ R +PG G Q HV DL ++ +E P
Sbjct: 141 VIRPPYLYGSMNDVYREAFVFDCALQHRKFYMPGDGSQKLQFFHVEDLCRLMEAILEKRP 200
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
E +IFN V + A+ + +LC QAAG P+ + + D F F +
Sbjct: 201 E---EHIFN-VGNEAIDIRTFVELCYQAAGEPLRVRLIGDQFCQTD---YFCFPAYEYVL 253
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+ + K++L + E L+E F Y +
Sbjct: 254 DVKKQKELLP--DVKDFYEGLREAFAWYCE 281
>gi|325663799|ref|ZP_08152200.1| hypothetical protein HMPREF0490_02941 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470132|gb|EGC73366.1| hypothetical protein HMPREF0490_02941 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 303
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWA 80
A+ G ++ ISS+ +Y P E V K + ++ E+Y+ E +
Sbjct: 83 AELKGFSTYILISSSAVYPETLPQPFSEEQPVGYNSIWRKYGSDKIEAEEYLMEKVPDAY 142
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN-P 139
RP Y+ GS N+ E + FD ++ R +PG G Q HV DL ++ +E P
Sbjct: 143 VIRPPYLYGSMNDVYREAFVFDCALQHRKFYMPGDGSQKLQFFHVEDLCRLMEAILEKRP 202
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
E +IFN V + A+ + +LC QAAG P+ + + D F F +
Sbjct: 203 E---EHIFN-VGNEAIDIRTFVELCYQAAGEPLRVRLIGDQFCQTD---YFCFPAYEYVL 255
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+ + K++L + E L+E F Y +
Sbjct: 256 DVKKQKELLP--DVKDFYEGLREAFAWYCE 283
>gi|289582190|ref|YP_003480656.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|448282394|ref|ZP_21473681.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|289531743|gb|ADD06094.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
gi|445576454|gb|ELY30909.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099]
Length = 328
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR+ + V +PG G + A V D++S L + E
Sbjct: 153 NAMSVRPCIVYGPDDYTERLDFWIDRVNQHDRVVVPGDGTNVWHRAFVDDVASALRIVAE 212
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNM 195
+ EA + +N+ R VTLD M L A A V+IVH P+ AAG +P
Sbjct: 213 HGEAGEA--YNVGDQRLVTLDEMVDLIADALDTTVDIVHAGPRELAAGEIDPTDYPLYRE 270
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 235
+ + A LGW ST L +++ E++++ RD +
Sbjct: 271 YPHVLSTAKLTALGWESTP-LESAMEQSVEDHLESDRDGR 309
>gi|448355174|ref|ZP_21543927.1| NAD-dependent epimerase/dehydratase [Natrialba hulunbeirensis JCM
10989]
gi|445635939|gb|ELY89104.1| NAD-dependent epimerase/dehydratase [Natrialba hulunbeirensis JCM
10989]
Length = 329
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR+ + V +PG G + A V D++S L + E
Sbjct: 154 NAMSVRPCIVYGPDDYTERLDFWIDRVNQHDRVVVPGDGTNVWHRAFVDDVASALRIVAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNM 195
EA + +N+ + VTLD M L A A G V++VH P+ AAG +P
Sbjct: 214 RGEAGEA--YNVGDRQLVTLDEMVDLIADALGTTVDVVHAGPRELAAGEIDPTDYPLYRE 271
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 235
+ + A LGW ST L +++ E++++ RD +
Sbjct: 272 YPHVLSTAKLAALGWESTA-LESAMEQSVEDHLESDRDGR 310
>gi|268609759|ref|ZP_06143486.1| dTDP-glucose 4,6-dehydratase [Ruminococcus flavefaciens FD-1]
Length = 304
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 36 FLFISSAGIYKPADEPPHVEGDVVKPDA-------GHVQVEKYISENFSNWASFRPQYMI 88
++ +SS+ +Y P E + P++ + EKY++EN S++ RP Y+
Sbjct: 92 YVLVSSSAVYPETLPQPFSEDQKIGPNSIWGAYGKDKISAEKYVTENISDYYIIRPPYLY 151
Query: 89 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 148
G NN E + F+ R P +P G H+RD+ + + + E + I+N
Sbjct: 152 GPMNNVYREAFVFECAERNMPFYLPKDGSMPLQFFHIRDMCRFMEILIT--EKPAERIYN 209
Query: 149 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 197
+ + V++ +C Q G E + P + I + FPF + +
Sbjct: 210 VGNATTVSIREWVTVCYQLCGKAPEFI---PVSGDIPQRNYFPFYDYAY 255
>gi|374626317|ref|ZP_09698730.1| hypothetical protein HMPREF0978_02050 [Coprobacillus sp.
8_2_54BFAA]
gi|373914174|gb|EHQ46006.1| hypothetical protein HMPREF0978_02050 [Coprobacillus sp.
8_2_54BFAA]
Length = 301
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 31 SGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPDAG--HVQVEKYISENFSNWASFR 83
+GVK ++ ISS+ +Y +P E V + + D G ++ E Y+ + R
Sbjct: 84 NGVKDYILISSSAVYPESLSQPFKEEQKVGRNSIWGDYGSNKIEAENYLLSHIPQAYILR 143
Query: 84 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML-TLAVENPEAA 142
P Y+ G N E + F+ ++KR +P G HV DL ++ T+ ++P
Sbjct: 144 PPYLYGPMQNVYREPFVFECALKKRSFYLPNGGKMLLQFFHVEDLCRLMETIIKKHPH-- 201
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 202
+I N+ + V ++ +LC Q G+P+ V+ + + F F N ++ +
Sbjct: 202 -DHIMNVGNSEIVDINKFVELCYQVVGVPLNKVYVTKHD---NQRDYFSFHNYNYVLDVT 257
Query: 203 AAKDILGWRSTTNLPEDLKERFEEYV 228
+L S +L E L+E ++ Y+
Sbjct: 258 KQNQLL--PSQKSLFEGLEESYQWYL 281
>gi|167757222|ref|ZP_02429349.1| hypothetical protein CLORAM_02772 [Clostridium ramosum DSM 1402]
gi|365830095|ref|ZP_09371680.1| hypothetical protein HMPREF1021_00444 [Coprobacillus sp. 3_3_56FAA]
gi|167703397|gb|EDS17976.1| NAD dependent epimerase/dehydratase family protein [Clostridium
ramosum DSM 1402]
gi|365263849|gb|EHM93671.1| hypothetical protein HMPREF1021_00444 [Coprobacillus sp. 3_3_56FAA]
Length = 301
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 31 SGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPDAG--HVQVEKYISENFSNWASFR 83
+GVK ++ ISS+ +Y +P E V + + D G ++ E Y+ + R
Sbjct: 84 NGVKDYILISSSAVYPESLSQPFKEEQKVGRNSIWGDYGSNKIEAENYLLSHIPQAYILR 143
Query: 84 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML-TLAVENPEAA 142
P Y+ G N E + F+ ++KR +P G HV DL ++ T+ ++P
Sbjct: 144 PPYLYGPMQNVYREPFVFECALKKRSFYLPNDGKMLLQFFHVEDLCKLMETIIKKHPH-- 201
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 202
+I N+ + V ++ +LC Q G+P+ V+ + + F F N ++ +
Sbjct: 202 -DHIMNVGNSEIVDINKFVELCYQVVGVPLNKVYVTKHD---NQRDYFSFHNYNYVLDVT 257
Query: 203 AAKDILGWRSTTNLPEDLKERFEEYV 228
+L S +L E L+E ++ Y+
Sbjct: 258 KQNQLLP--SQKSLFEGLEESYQWYL 281
>gi|237735693|ref|ZP_04566174.1| dTDP-glucose 4,6-dehydratase [Mollicutes bacterium D7]
gi|229381438|gb|EEO31529.1| dTDP-glucose 4,6-dehydratase [Coprobacillus sp. D7]
Length = 301
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 31 SGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPDAG--HVQVEKYISENFSNWASFR 83
+GVK ++ ISS+ +Y +P E V + + D G ++ E Y+ + R
Sbjct: 84 NGVKDYILISSSAVYPESLSQPFKEEQKVGRNSIWGDYGSNKIEAENYLLSHIPQAYILR 143
Query: 84 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML-TLAVENPEAA 142
P Y+ G N E + F+ ++KR +P G HV DL ++ T+ ++P
Sbjct: 144 PPYLYGPMQNVYREPFVFECALKKRSFYLPNDGKMLLQFFHVEDLCKLMETIIKKHPH-- 201
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 202
+I N+ + V ++ +LC Q G+P+ V+ + + F F N ++ +
Sbjct: 202 -DHIMNVGNSEIVDINKFVELCYQVVGVPLNKVYVTKHD---NQRDYFSFHNYNYVLDVT 257
Query: 203 AAKDILGWRSTTNLPEDLKERFEEYV 228
+L S +L E L+E ++ Y+
Sbjct: 258 KQNQLLP--SQKSLFEGLEESYQWYL 281
>gi|361069177|gb|AEW08900.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138126|gb|AFG50217.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138128|gb|AFG50218.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138130|gb|AFG50219.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138132|gb|AFG50220.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138134|gb|AFG50221.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138136|gb|AFG50222.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138138|gb|AFG50223.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138140|gb|AFG50224.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138142|gb|AFG50225.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138144|gb|AFG50226.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138146|gb|AFG50227.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138148|gb|AFG50228.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138150|gb|AFG50229.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138152|gb|AFG50230.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
gi|383138154|gb|AFG50231.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
Length = 46
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
Query: 213 TTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKI-LESLKVPIP 254
+TNLP+DLKERFEEYV IGRDKK ++FE+DDKI LES +V +P
Sbjct: 1 STNLPQDLKERFEEYVAIGRDKKDIKFELDDKIVLESSRVAVP 43
>gi|448549969|ref|ZP_21628574.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sp. ATCC BAA-645]
gi|448559677|ref|ZP_21633751.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sp. ATCC BAA-644]
gi|445711067|gb|ELZ62862.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sp. ATCC BAA-644]
gi|445713017|gb|ELZ64798.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sp. ATCC BAA-645]
Length = 329
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR++ V +PG G + A+V D++S + + E
Sbjct: 154 NAMSVRPCIVYGPEDYTERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
EA + +N+ R VTL+ M ++ A AAG VE+VH + AAG+ +R+
Sbjct: 214 EGEAGEA--YNVGDRRLVTLEEMVEVIADAAGTDVEVVHAGERELAAAGLSMDDFILYRD 271
Query: 195 M-HFYAEPRAAKDILGWRST 213
H + + A+ LGW ST
Sbjct: 272 YPHVLSTDKLAR--LGWEST 289
>gi|448542572|ref|ZP_21624734.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein,
partial [Haloferax sp. ATCC BAA-646]
gi|445707051|gb|ELZ58917.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein,
partial [Haloferax sp. ATCC BAA-646]
Length = 300
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR++ V +PG G + A+V D++S + + E
Sbjct: 154 NAMSVRPCIVYGPEDYTERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
EA + +N+ R VTL+ M ++ A AAG VE+VH + AAG+ +R+
Sbjct: 214 EGEAGEA--YNVGDRRLVTLEEMVEVIADAAGTDVEVVHAGERELAAAGLSMDDFILYRD 271
Query: 195 M-HFYAEPRAAKDILGWRST 213
H + + A+ LGW ST
Sbjct: 272 YPHVLSTDKLAR--LGWEST 289
>gi|315427598|dbj|BAJ49197.1| UDP-glucose 4-epimerase [Candidatus Caldiarchaeum subterraneum]
Length = 315
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 78 NWASFRPQYMIG------SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
N+ RP + G +G + ++F++ ++ +P+PI G+G Q + +V D +
Sbjct: 165 NYVILRPSNVYGPRQPYWAGGWYNFIAYWFEQAIKNKPIPIYGTGEQIRDYTYVEDTAKA 224
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 191
LA+ENP AA F L + TL+ +AK + + ++ P+ I
Sbjct: 225 YILAMENP-AAIGETFLLPTGIGTTLNQLAKKILEITESQAGVEYHPPRKGDI------- 276
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
F R A+ LGW+ TTNL + LK +E
Sbjct: 277 ---QRFVGTYRKAEQKLGWKPTTNLDQGLKREYE 307
>gi|448359916|ref|ZP_21548561.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
gi|445641211|gb|ELY94293.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
Length = 329
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 7/178 (3%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR+ + V +PG G + A V D++S L + E
Sbjct: 154 NAMSVRPCIVYGPDDYTERLDFWIDRVNQHDRVVVPGDGTNVWHRAFVDDVASALRIVAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNM 195
EA + +N+ R VT D M L A A V+IVH P+ AAG +P
Sbjct: 214 RGEAGEA--YNVGDQRLVTFDEMVDLIADALETTVDIVHAGPRELAAGEIDPTDYPLYRE 271
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAM--QFEIDDKILESLKV 251
+ + A LGW ST L +++ E++++ RD +A E ++++L L+
Sbjct: 272 YPHVLSTAKLTALGWESTP-LESAMEQSAEDHLESDRDGRAQGPDREAEERVLGILET 328
>gi|410725913|ref|ZP_11364201.1| nucleoside-diphosphate-sugar epimerase [Clostridium sp. Maddingley
MBC34-26]
gi|410601548|gb|EKQ56056.1| nucleoside-diphosphate-sugar epimerase [Clostridium sp. Maddingley
MBC34-26]
Length = 300
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 14/199 (7%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQY 86
K ++FISS+ +Y +E P E + K ++ E+Y+ N RP Y
Sbjct: 86 KDYIFISSSAVYPETNEQPFSENQRIGLNSIWSKYGTDKIEAEEYLISRVPNAYILRPPY 145
Query: 87 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 146
+ G N E + F+ ++ R IP G HV DL ++ +EN +I
Sbjct: 146 LYGPMQNLYREAFVFECALKNRKFYIPKDGKMKLQFFHVDDLCKVIEKILEN--HPKEHI 203
Query: 147 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
FN+ + V ++ +LC + G P+E V+ + + F F + + + +
Sbjct: 204 FNVGNTEVVDINTFVELCYKVVGTPLEKVYVTNHD---NQRDYFSFYDYEYILDVSRQNE 260
Query: 207 ILGWRSTTNLPEDLKERFE 225
+L NL LKE +E
Sbjct: 261 LLP--EQINLFYGLKESYE 277
>gi|448613288|ref|ZP_21663168.1| NAD-dependent epimerase/dehydratase [Haloferax mucosum ATCC
BAA-1512]
gi|445740185|gb|ELZ91691.1| NAD-dependent epimerase/dehydratase [Haloferax mucosum ATCC
BAA-1512]
Length = 329
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR++ + +PG G + A+V D++S + L E
Sbjct: 154 NAMSVRPCIVYGPHDYTERLDYWIDRVLNYDRLVVPGDGTNVWHRAYVEDVASAMRLVAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
E + +N+ R VTL+ M ++ A AAG VE+VH + AAG+D +R
Sbjct: 214 EGEPGEA--YNVGDRRLVTLEEMVEVIADAAGTDVEVVHAGERELAAAGLDTTDFVLYRE 271
Query: 195 M-HFYAEPRAAKDILGWRST 213
H + + A+ LGW ST
Sbjct: 272 YPHVLSTDKLAR--LGWDST 289
>gi|395007244|ref|ZP_10391006.1| nucleoside-diphosphate-sugar epimerase [Acidovorax sp. CF316]
gi|394314733|gb|EJE51600.1| nucleoside-diphosphate-sugar epimerase [Acidovorax sp. CF316]
Length = 315
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 16/201 (7%)
Query: 36 FLFISSAGIYKPADEP-PHVEGDVVKPDA--GHVQVEKYISENFSNWASF------RPQY 86
++ +SSA +Y+ + P P E D G +K +E +S RP Y
Sbjct: 93 YVLLSSAAVYERSTAPLPFSEASPAHGDGIWGTYGRDKAAAETVLCASSIPRQFVVRPPY 152
Query: 87 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 146
+ G GNN D E + + R + + P+ +P G + DL+ + ++ A + I
Sbjct: 153 IYGPGNNLDRERFVWARQLAQAPIFVPADGETLIQFVGIDDLTRAIVGFLDPQCAVAPGI 212
Query: 147 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
+NL S V+ + L Q AG +VH I A++ FPFR H + +
Sbjct: 213 YNLASPTYVSFNQYIALLGQIAGRQSHVVHVSDST--IPAREYFPFRKAHLIL---STQK 267
Query: 207 ILGW--RSTTNLPEDLKERFE 225
+ W R T L E L+ F+
Sbjct: 268 LATWSERPQTPLVEGLQAAFD 288
>gi|383138124|gb|AFG50216.1| Pinus taeda anonymous locus CL2182Contig1_04 genomic sequence
Length = 46
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
Query: 213 TTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKI-LESLKVPIP 254
+TNLP+DLKERFEEYV +GRDKK ++FE+DDKI LES +V +P
Sbjct: 1 STNLPQDLKERFEEYVAMGRDKKDIKFELDDKIVLESSRVAVP 43
>gi|448574883|ref|ZP_21641406.1| NAD-dependent epimerase/dehydratase [Haloferax larsenii JCM 13917]
gi|445732562|gb|ELZ84144.1| NAD-dependent epimerase/dehydratase [Haloferax larsenii JCM 13917]
Length = 329
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR++ V +PG G + A+V D++S + + E
Sbjct: 154 NAMSVRPCIVYGPHDYTERLDYWIDRVLNHDRVVVPGDGTNVWHRAYVEDVASAMRVVAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
EA + +N+ R VTL+ M ++ A AG VE+VH + A G+D +R
Sbjct: 214 EGEAGEA--YNVGDRRLVTLEEMVEVIADVAGTNVEVVHAGERELAAGGLDPTDFVLYRE 271
Query: 195 M-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
H A + A LGW ST + E ++ E + RD
Sbjct: 272 YPHVLATNKLAS--LGWESTP-VEEAMRRSVESHRDSDRD 308
>gi|381181099|ref|ZP_09889935.1| NAD-dependent epimerase/dehydratase [Treponema saccharophilum DSM
2985]
gi|380767104|gb|EIC01107.1| NAD-dependent epimerase/dehydratase [Treponema saccharophilum DSM
2985]
Length = 301
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVK-----PDAG--HVQVEKYISENFSNWASFRPQ 85
V ++F+SS+ +Y +E P +E V D G ++ E+Y+ + RP
Sbjct: 86 VPDYIFLSSSAVYPETEEQPFMENVKVGFNKFWKDYGMNKIEAEEYLRSVKPDSYIIRPP 145
Query: 86 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE-NPEAASS 144
Y+ G NN E + F+ RP IP +G ++ DL ++ ++ +PE
Sbjct: 146 YLYGPENNVYREAFVFECAENNRPFYIPSNGDMKLQFFYIEDLCKIIEKIIKTHPEEK-- 203
Query: 145 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA 204
IFN+ ++ +V++ KLC + G V + + + I+ + F F N + +
Sbjct: 204 -IFNVGNEESVSIKEWVKLCYEVVGKDVIFKNVNEE---IEQRNYFSFYNYEYKLDITRQ 259
Query: 205 KDILGWRSTTNLPEDLKERFEEYVKIGRDK 234
K +L + +TNL E L+E + Y K +DK
Sbjct: 260 KSLL--KESTNLREGLRESYCWY-KNNKDK 286
>gi|448625257|ref|ZP_21671024.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax denitrificans ATCC 35960]
gi|445749019|gb|EMA00465.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax denitrificans ATCC 35960]
Length = 329
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR++ V +PG G + A+V D++S + + E
Sbjct: 154 NAMSVRPCIVYGPEDYTERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
EA + +N+ R VTL+ M ++ A AAG VE+VH + AA + +R+
Sbjct: 214 EGEAGEA--YNVGDRRLVTLEEMVEVIADAAGTDVEVVHAGERELAAADLSMDDFVLYRD 271
Query: 195 M-HFYAEPRAAKDILGWRST 213
H A + A+ LGW ST
Sbjct: 272 YPHVLATDKLAR--LGWEST 289
>gi|164686607|ref|ZP_02210635.1| hypothetical protein CLOBAR_00199 [Clostridium bartlettii DSM
16795]
gi|164604336|gb|EDQ97801.1| NAD dependent epimerase/dehydratase family protein [Clostridium
bartlettii DSM 16795]
Length = 312
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 10/205 (4%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDV-VKPDAGH-----VQVEKYISENFSNWASFRPQY 86
+K+++ +SS+ +YK +++ +G+ + P G VQ E YI ++ + RP +
Sbjct: 90 LKKYVVLSSSVVYKESEKYISEDGEKELNPAYGKYGIEKVQAEHYIIDSDIPYIIIRPTH 149
Query: 87 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ--FTNIAHVRDLSSMLTLAVENPEAASS 144
+ G NN E +FFDRI + +P+P + ++ D +L +N +
Sbjct: 150 IYGPENNLYRETYFFDRIREGKAIPVPSDRNEPVLNQFIYIDDFVRVLYSLTKNDKVRE- 208
Query: 145 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA 204
I+N+ + + +T + C + G I + D I + FPF+N E
Sbjct: 209 -IYNVSTPQNITWKKFIETCGEVMGKEPIIKYVDSDKIKIKERSYFPFKNTSCILEIEKL 267
Query: 205 KDILGWRSTTNLPEDLKERFEEYVK 229
D + L + L++ +E Y+K
Sbjct: 268 IDHGLYIPNILLEKGLRKTYEWYIK 292
>gi|168006662|ref|XP_001756028.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692958|gb|EDQ79313.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 305
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKA 181
HV+D++ M + V E A +I+N+ + VT +G+AK A A G PV V Y+PK
Sbjct: 115 GHVKDMA-MAFVTVLGNEKAYGHIYNINDAKNVTFNGIAKASAIADGSPVPRTVQYNPKD 173
Query: 182 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEI 241
KKAF R+ H + + L + L + K+ + G +KA F
Sbjct: 174 FDFSKKKAFSLRDQHIFTSAEKVEKELSFTPEYGLIDGWKDSYNLDFGRGTSRKAANFPT 233
Query: 242 DDKILESL 249
DD LE L
Sbjct: 234 DDMTLEKL 241
>gi|312142954|ref|YP_003994400.1| NAD-dependent epimerase/dehydratase [Halanaerobium
hydrogeniformans]
gi|311903605|gb|ADQ14046.1| NAD-dependent epimerase/dehydratase [Halanaerobium
hydrogeniformans]
Length = 314
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS 73
T+NN + + + AK S +K+F++ SS+ +Y D+ P E + ++P + + V K
Sbjct: 98 THNNIMGTQRLLEAAKESNIKKFVYASSSSVYGDTDQLPMQETNRLQPVSPY-GVSKLAG 156
Query: 74 EN-----FSNW----ASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIA 123
EN + N+ S R + G D F I++ + + I G G Q N
Sbjct: 157 ENLCYLYYKNFNVPTVSLRYFTVFGERQRPDMAFHIFIKAILQDKKLTIFGDGKQSRNFT 216
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
HV+D+ LA E+ A+ IFN+ D + V L+ L + G K A
Sbjct: 217 HVQDIVKANILAAESD--AAGEIFNIGGDGKRVVLNDSIDLMEEIIG----------KKA 264
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+ +K H A+ AK++LG+ T+ E L ER E++K
Sbjct: 265 NREYQKVVKGDVKHTSADTSKAKEMLGYEPETDFEEGL-EREVEFLK 310
>gi|292655031|ref|YP_003534928.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax volcanii DS2]
gi|448292667|ref|ZP_21483073.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax volcanii DS2]
gi|291370200|gb|ADE02427.1| 3-beta hydroxysteroid dehydrogenase/isomerase family superfamily
[Haloferax volcanii DS2]
gi|445572423|gb|ELY26963.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax volcanii DS2]
Length = 329
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 8/139 (5%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR++ V +PG G + A+V D++S + + E
Sbjct: 154 NAMSVRPCIVYGPDDYTERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
EA + +N+ R VTL+ M + A AAG VE+VH + AAG+ +R+
Sbjct: 214 EGEAGEA--YNVGDRRLVTLEEMVEAIADAAGTDVEVVHAGERELAAAGLSMDDFILYRD 271
Query: 195 M-HFYAEPRAAKDILGWRS 212
H + + A+ LGW S
Sbjct: 272 YPHVLSTDKLAR--LGWES 288
>gi|448338471|ref|ZP_21527518.1| NAD-dependent epimerase/dehydratase [Natrinema pallidum DSM 3751]
gi|445622785|gb|ELY76230.1| NAD-dependent epimerase/dehydratase [Natrinema pallidum DSM 3751]
Length = 329
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
+ RP + G + + +W+ DR+ R V +PG G + +V D++S L + E
Sbjct: 157 AVRPPIVYGPHDYTERLDWWIDRVNRFDRVVVPGDGTNVWHRVYVEDVASALRIVAERGT 216
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFY 198
A + +N+ R VTL+ M L + VEIVH P+ AAG + +P + +
Sbjct: 217 AGEA--YNVGDRRLVTLEEMVALIGETLATEVEIVHAGPRELAAGDIDLEDYPLYRAYPH 274
Query: 199 AEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAM--QFEIDDKILESLKV 251
A LGW ST L E + +++++ RD E ++++L L+
Sbjct: 275 VLSTAKLAALGWESTP-LEEAMARSVDDHLESDRDGDGNGPDREAEERVLRVLET 328
>gi|373857922|ref|ZP_09600661.1| NAD-dependent epimerase/dehydratase [Bacillus sp. 1NLA3E]
gi|372452144|gb|EHP25616.1| NAD-dependent epimerase/dehydratase [Bacillus sp. 1NLA3E]
Length = 326
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDV-VKPDAGHVQVEKYISENF------SN-- 78
K S + ++ F+SS +Y + + + P+ G ++K +E++ SN
Sbjct: 87 VKLSRITRYCFLSSGAVYTMSKNYLYENSERGTNPNWGMYGLDKKEAEDYLFNLSKSNGF 146
Query: 79 -WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
FRP Y+ G GNN E +FF RI+ +P+PIP +G + T H+ D+ ++ ++
Sbjct: 147 PMVIFRPSYIYGEGNNLYRESYFFHRILNNQPIPIPNTGKK-TQFIHINDVVDIILDSIT 205
Query: 138 NPEAASSNIFNLVSDRAVT----LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
N + +NL ++ + K+ ++ + + + D I ++ FPFR
Sbjct: 206 NDKTVGE-AYNLTHPSEFEWIEFVEIIQKIVSKQTTI-LSVSQEDMNNLNITPRQFFPFR 263
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
++ + + K+ N+ E L+ F+ +++
Sbjct: 264 DITYLMDINKLKEHNLILPRINIEEGLQASFDWFLQ 299
>gi|448590201|ref|ZP_21650169.1| NAD-dependent epimerase/dehydratase [Haloferax elongans ATCC
BAA-1513]
gi|445734991|gb|ELZ86545.1| NAD-dependent epimerase/dehydratase [Haloferax elongans ATCC
BAA-1513]
Length = 329
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR++ V +PG G + A+V D++S + + E
Sbjct: 154 NAMSIRPCIVYGPHDYTERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVIAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
EA + +N+ + VTL+ M ++ A AG VE+VH + A G+D +R
Sbjct: 214 EGEAGEA--YNVGDRQLVTLEEMVEVIADVAGTDVEVVHAGERELAAGGLDPTDFILYRE 271
Query: 195 M-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
H A + A LGW ST + E ++ E + RD
Sbjct: 272 YPHVLATNKLAS--LGWESTP-VEEAMRRSVESHRDSDRD 308
>gi|326793078|ref|YP_004310899.1| NAD-dependent epimerase/dehydratase [Clostridium lentocellum DSM
5427]
gi|326543842|gb|ADZ85701.1| NAD-dependent epimerase/dehydratase [Clostridium lentocellum DSM
5427]
Length = 319
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 22/235 (9%)
Query: 30 SSGVKQFLFISSAGIYKPADE---PPHVEGDVV---KPDAGHVQVEKYISENFSN----W 79
+S +K+++F SS +Y P++E +G+ K + +E Y+ E +
Sbjct: 90 TSQLKRYIFCSSGAVYIPSEEVMDETFSKGENKNWGKYGLDKLAIEDYLFELYQAKGIPV 149
Query: 80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
RP Y+ G GNN E + F +I + +PV +P G ++ DL + A+
Sbjct: 150 TMLRPTYIYGPGNNLYRESYLFHQISKNQPVLVP-EGDTRVQFLYIEDLVKLFEAAM-YE 207
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
E A ++N+ VT + + A+ G +I+ G+ ++ FPFR +
Sbjct: 208 EKAIGQVYNVTHKEQVTYEEWVETAAKVMGKQAQIIKLKT-PEGMVSRMYFPFRECTYLL 266
Query: 200 EP-RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 253
+ + +++L + T L LK+ +E YV+ +K + ID+++LE +K+ +
Sbjct: 267 DTSKCDRELL--VAETPLIAGLKKAYEWYVE---EKPQV---IDERMLEGIKLLL 313
>gi|448341771|ref|ZP_21530727.1| NAD-dependent epimerase/dehydratase [Natrinema gari JCM 14663]
gi|445626900|gb|ELY80233.1| NAD-dependent epimerase/dehydratase [Natrinema gari JCM 14663]
Length = 329
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 7/183 (3%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
++N + RP + G + + +W+ DR+ R V +PG G + +V D++S L
Sbjct: 149 ADNGVRAMAVRPPIVYGPHDYTERLDWWIDRVNRFDRVVVPGDGTNVWHRVYVEDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAF 190
+ E A + +N+ R VTL+ M +L + VE+VH P+ AAG + +
Sbjct: 209 RIVAERGTAGEA--YNVGDRRLVTLEEMVELIGETLATEVEVVHAGPRELAAGDIDLEDY 266
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR--DKKAMQFEIDDKILES 248
P + + A LGW +T L E + +++++ R D+ E ++++L
Sbjct: 267 PLYRSYPHVLSTAKLAALGWEATP-LEEAMARSVDDHLESDRDGDRNGPDREAEERVLSI 325
Query: 249 LKV 251
L+
Sbjct: 326 LET 328
>gi|448582063|ref|ZP_21645567.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax gibbonsii ATCC 33959]
gi|445731711|gb|ELZ83294.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax gibbonsii ATCC 33959]
Length = 329
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR++ V +PG G + A+V D++S + + E
Sbjct: 154 NAMSVRPCIVYGPEDYTERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
EA + +N+ R VTL+ M ++ A AAG VE+VH + A + +R+
Sbjct: 214 EGEAGEA--YNVGDRRLVTLEEMVQVIADAAGTDVEVVHAGERELAATDLSMDDFILYRD 271
Query: 195 M-HFYAEPRAAKDILGWRST 213
H A + A+ LGW ST
Sbjct: 272 YPHVLATDKLAR--LGWEST 289
>gi|448347316|ref|ZP_21536188.1| NAD-dependent epimerase/dehydratase [Natrinema altunense JCM 12890]
gi|445630717|gb|ELY83977.1| NAD-dependent epimerase/dehydratase [Natrinema altunense JCM 12890]
Length = 329
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
+ RP + G + + +W+ DR+ R V +PG G + +V D++S L + E
Sbjct: 157 AVRPPIVYGPHDYTERLDWWIDRVNRFDRVVVPGDGTNVWHRVYVEDVASALRIVAERGT 216
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFY 198
A + +N+ R VTL+ M L + VEIVH P+ AAG + +P + +
Sbjct: 217 AGEA--YNVGDRRLVTLEEMVALIGETLATEVEIVHAGPRELAAGDIDLEDYPLYRAYPH 274
Query: 199 AEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAM--QFEIDDKILESLKV 251
A LGW ST L E + +++++ RD E ++++L L+
Sbjct: 275 VLSTAKLAALGWESTP-LEEAMARAVDDHLESDRDGDGNGPDREAEERVLRVLET 328
>gi|289577898|ref|YP_003476525.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter italicus
Ab9]
gi|289527611|gb|ADD01963.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter italicus
Ab9]
Length = 288
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK 70
+F T N + + + SGVK+ ++ SSA +Y + P EG + P + + + K
Sbjct: 56 VFDTKVNILGTVNLLECCRKSGVKKVIYASSAAVYGNPEYLPIDEGHRINPISSY-GISK 114
Query: 71 YISENF---------SNWASFRPQYMIGSGNNKDCE----EWFFDRIVR-KRPVPIPGSG 116
+ +E++ + R + G + E F D++++ KRPV I G G
Sbjct: 115 HTAEHYFEVYSQLYDLKYTILRYANVYGIRQDPKGEGGVISIFTDKMLKGKRPV-IFGDG 173
Query: 117 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
Q + +V+D++ LA+E + + N+ +++ +++ + ++ + +E ++
Sbjct: 174 NQTRDFVYVKDVAKANLLALER---GDNEVVNISTNKPTSINELVEIMNKIMNTSLEPIY 230
Query: 177 YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
+P+ I +H Y + + A D++GWR +L + L+E E Y
Sbjct: 231 TEPRKGDI----------VHSYLDNKKALDVIGWRPEYSLEDGLREIIEYY 271
>gi|336429706|ref|ZP_08609666.1| hypothetical protein HMPREF0994_05672 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002036|gb|EGN32161.1| hypothetical protein HMPREF0994_05672 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 344
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 30 SSGVK--QFLFISSAGIY-----KPADEPPHVEGDVVKPD--AGHVQVEKYISENFSNWA 80
++G+K ++ ISS+ +Y +P +E + + + D +G V E ++ + N
Sbjct: 124 NAGIKFDDYVLISSSAVYPETLPQPFNERQPIGKNSIWGDYSSGKVGAEVCLTSRYPNAY 183
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
RP Y+ G N E + F+ KR IPG G HV DL + + + E
Sbjct: 184 VIRPPYLYGPMQNLYREPFVFECADLKRKFYIPGDGEMKLLFFHVEDLCRFIYIILR--E 241
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAE 200
++IFN+ + + V++ A+LC +AAG P+E V + + F F N + +
Sbjct: 242 HPDNHIFNVGNTQPVSISTFAELCYRAAGAPLEKVFVKDHP---NQRDYFSFHNYEYLLD 298
Query: 201 PRAAKDILGWRSTTNLPEDLKERFEEY 227
+I+ +L LKE +E Y
Sbjct: 299 VSLQNEIMP--EQKDLYCGLKESYEWY 323
>gi|223934764|ref|ZP_03626684.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
gi|223896719|gb|EEF63160.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514]
Length = 329
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 26/244 (10%)
Query: 6 AKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--- 62
+ F F NN + + A VK F+F SS +Y A + P +E V +P+
Sbjct: 82 SHFIRRFNYTNNLIGSVNLINAAVKYEVKCFVFTSSIAVYG-AGQVPMIESMVPRPEDPY 140
Query: 63 -AGHVQVEKYIS---ENFS-NWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPI 112
VE ++ E F N+ FRP + G N ++ F ++I+RK P+ I
Sbjct: 141 GISKFAVEMDLAAAHEMFGLNYIIFRPHNVYGENQNIGDKYRNVIGIFMNQIMRKEPMTI 200
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G GMQ +H+ DL+ + +V+ A + I N+ +D+ +++ +A + + A G+
Sbjct: 201 FGDGMQTRAFSHIDDLAPQIARSVK-VRKAYNEIINIGADKPYSVNELAYVVSSAFGVSP 259
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR 232
I + P+ H Y+ AK I G S +L + + + +K+G
Sbjct: 260 RIKYLTPRN-----------EVQHAYSNHDKAKKIFGRGSGVSLEKGVGRMAQWALKVGA 308
Query: 233 DKKA 236
+ A
Sbjct: 309 RRSA 312
>gi|448561303|ref|ZP_21634655.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax prahovense DSM 18310]
gi|445721535|gb|ELZ73203.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax prahovense DSM 18310]
Length = 383
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 8/140 (5%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR++ V +PG G + A+V D++S + + E
Sbjct: 154 NAMSVRPCIVYGPEDYTERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
EA + +N+ R VTL+ M ++ A AAG VE+VH + A + +R
Sbjct: 214 EGEAGEA--YNVGDRRVVTLEEMVQVIADAAGTDVEVVHAGERELAATDLSMDDFILYRG 271
Query: 195 M-HFYAEPRAAKDILGWRST 213
H A + A+ LGW ST
Sbjct: 272 YPHVLATDKLAR--LGWEST 289
>gi|399575257|ref|ZP_10769015.1| nucleoside-diphosphate-sugar epimerase [Halogranum salarium B-1]
gi|399239525|gb|EJN60451.1| nucleoside-diphosphate-sugar epimerase [Halogranum salarium B-1]
Length = 329
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 28/225 (12%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHVEG---------DVVKPDAGHV---------QVEKYI 72
S V +++ISS Y +E P EG D + D+G +V
Sbjct: 90 SDVDAYVYISSGDAYG-REEIPKREGETPMRPCTPDQAEDDSGETYGNRKAEGDRVVFEA 148
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E+ + S RP + G + + +++ +R+ + +PG G + A+V D++S L
Sbjct: 149 AESGVDAMSVRPCIVYGPHDYTERMDYWLNRVENYDRIVVPGDGQNVWHRAYVEDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKA 189
+ E EA ++N+ R VTL+ M L A A V++VH + G+D K
Sbjct: 209 RVVAEEGEAGE--VYNVGDRRLVTLEEMLDLAADAMDTDVDVVHAGERELAVGGLDTSKF 266
Query: 190 FPFRNM-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+R+ H + A LGW ST+ L + EE+ + RD
Sbjct: 267 VLYRDYPHVLDTNKLAS--LGWESTS-LETAMARTVEEHCESERD 308
>gi|448306805|ref|ZP_21496708.1| NAD-dependent epimerase/dehydratase [Natronorubrum bangense JCM
10635]
gi|445597316|gb|ELY51392.1| NAD-dependent epimerase/dehydratase [Natronorubrum bangense JCM
10635]
Length = 329
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E N S RP + G + + +W+ DR+ R V +PG G + A+V D++S L
Sbjct: 149 AEKGRNAMSVRPCIVYGPHDYTERLDWWIDRVNRFDRVLVPGDGTNIWHRAYVEDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH---YDPKAAGIDAKKA 189
+ E EA + +N+ R TL+ + + A VEIVH ++ +A GID +
Sbjct: 209 RIVAERGEAGEA--YNVGDRRLTTLEELVDVIAAQLETDVEIVHAGQHELEAGGIDLEDY 266
Query: 190 FPFRNM-HFYAEPRAAKDILGWRST 213
+R H + + LGW ST
Sbjct: 267 LLYRPYPHILSTAKLTA--LGWEST 289
>gi|373122412|ref|ZP_09536275.1| hypothetical protein HMPREF0982_01204 [Erysipelotrichaceae
bacterium 21_3]
gi|371663489|gb|EHO28677.1| hypothetical protein HMPREF0982_01204 [Erysipelotrichaceae
bacterium 21_3]
Length = 299
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 16/202 (7%)
Query: 36 FLFISSAGIYKPADEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMI 88
++ ISS+ +Y P E +V K ++ E + E N RP Y+
Sbjct: 87 YILISSSAVYPENASKPFKEDSIVNVNRFWGKYGTDKIEAEAKLMERNPNAYIIRPPYLY 146
Query: 89 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 148
G NN E + FD + R +P +G HV DL + + +EN +IFN
Sbjct: 147 GQMNNVYREAFIFDCALANRKFYLPHNGEMKLQFFHVHDLCRFIDILLENK--PRQHIFN 204
Query: 149 LVSDRAVTLDGMAKLCAQAAGLPVEIVH-YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 207
+ + V++ +LC VE V+ YD I + F F + +Y + +
Sbjct: 205 VGNKDMVSIREWVELCYHITNHQVEFVNVYD----DIKQRNYFCFNDYEYYLDVSEQYKL 260
Query: 208 LGWRSTTNLPEDLKERFEEYVK 229
+ + L E LKE F Y+K
Sbjct: 261 M--KEIKPLNEGLKEAFNWYIK 280
>gi|408417962|ref|YP_006759376.1| sugar dehydratase, associated with anaerobic toluene degradation
[Desulfobacula toluolica Tol2]
gi|405105175|emb|CCK78672.1| sugar dehydratase, associated with anaerobic toluene degradation
[Desulfobacula toluolica Tol2]
Length = 310
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 17/159 (10%)
Query: 33 VKQFLFISSAGIYK-----PADEP------PHVE-GDVVKPDAGHVQVEKYISENFSN-- 78
+KQ++FISSA +Y P DE P E G+ + ++ E+ + + N
Sbjct: 92 IKQYIFISSASVYDHSSILPLDETTRTIETPQPELGEYAEYGLNKIKAEQLLEKECLNRS 151
Query: 79 --WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
W RP + G N E +FFD + + PV +P + + N V DL+ ++ +
Sbjct: 152 ISWTILRPSIVYGKFNYAPRENYFFDLLEKAEPVILPENNLALFNFIFVDDLAKIIIKCI 211
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
ENP +A + +FN VS + D + + ++ V
Sbjct: 212 ENP-SARNQVFNTVSHEYFSYDTYVAMLEKVINKKIKTV 249
>gi|397774357|ref|YP_006541903.1| NAD-dependent epimerase/dehydratase [Natrinema sp. J7-2]
gi|397683450|gb|AFO57827.1| NAD-dependent epimerase/dehydratase [Natrinema sp. J7-2]
Length = 329
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 7/183 (3%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
++N + RP + G + + +W+ DR+ R V +PG G + +V D++S L
Sbjct: 149 ADNGVRAMAVRPPIVYGPHDYTERLDWWIDRVNRFDRVVVPGDGTNVWHRVYVEDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAF 190
+ E A + +N+ R VTL+ M +L + VE+VH P+ AAG + +
Sbjct: 209 RIVAERGTAGEA--YNVGDRRLVTLEEMVELIGETLATEVEVVHAGPRELAAGDIDLEDY 266
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAM--QFEIDDKILES 248
P + + A LGW +T L E + +++++ RD E ++++L
Sbjct: 267 PLYRSYPHVLSTAKLAALGWEATP-LEEAMARSVDDHLESDRDGDGNGPDREAEERVLSI 325
Query: 249 LKV 251
L+
Sbjct: 326 LET 328
>gi|345017158|ref|YP_004819511.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032501|gb|AEM78227.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 311
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-- 81
+ + + SGVK+ ++ SSA +Y + P EG + P + + + K+ +E++ S
Sbjct: 99 ILECCRKSGVKKIIYASSAAVYGNPEYLPIDEGHKINPISSY-GISKHTAEHYFEVYSQL 157
Query: 82 FRPQYMI--------------GSGNNKDCEEWFFDRIVR-KRPVPIPGSGMQFTNIAHVR 126
+ +Y I G G F D++++ +RPV I G G Q + +V+
Sbjct: 158 YDLKYTILRYANVYGIRQDPKGEGG---VISIFTDKMLKGERPV-IFGDGNQTRDFVYVK 213
Query: 127 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA 186
D++ LA+E + + N+ +++ +++ + + + +E ++ +P+ I
Sbjct: 214 DVAKANLLALER---GDNEVVNVSTNKPTSINELVDMMNKIMNTSLEPIYTEPRKGDI-- 268
Query: 187 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
MH Y + + A D+LGW+ +L + L+E E Y
Sbjct: 269 --------MHSYLDNKKALDVLGWKPEYSLEDGLRETIEYY 301
>gi|448605875|ref|ZP_21658468.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sulfurifontis ATCC BAA-897]
gi|445741198|gb|ELZ92702.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Haloferax sulfurifontis ATCC BAA-897]
Length = 329
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR++ V +PG G + A+V D++S + + E
Sbjct: 154 NAMSVRPCIVYGPEDYTERLDYWIDRVLNYDRVVVPGDGTNVWHRAYVEDVASAMRVVAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
EA + +N+ R VTL+ M ++ A AAG VE+VH + AA + +R+
Sbjct: 214 EGEAGEA--YNVGDRRLVTLEEMVEVIADAAGTDVEVVHAGERELAAADLSMDDFILYRD 271
Query: 195 M-HFYAEPRAAKDILGWRST 213
H + + A LGW ST
Sbjct: 272 YPHVLSTDKLAS--LGWGST 289
>gi|388254822|gb|AFK24937.1| NAD-dependent epimerase/dehydratase [uncultured archaeon]
Length = 304
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR--PQ 85
A S +K F+F SSA +Y P E + P + + + S + + R PQ
Sbjct: 105 ACSGRIKNFIFASSAAVYGRQTRLPISENQPLAPLSVYGATKMAGEGLVSAYTNSRQIPQ 164
Query: 86 YMI-----GSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
I G N+ E F +R+ +P I G G+Q + V D+ + LA
Sbjct: 165 ATILRFFNAYGQNQSLEYAGVIAKFAERLAEGKPPIIFGDGLQTRDFVSVEDIVGAIILA 224
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 195
++ + +S ++N+ + R V+++ +A + GL V +H D I +
Sbjct: 225 MD---STTSGVYNIGTGRPVSVNDLAASMIRIMGLNVTPIHRDLVDGEI----------L 271
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
H YA+ + AK LG+ +TT+L LK+ +
Sbjct: 272 HSYADTKKAKSELGFVATTDLQTQLKKLMQ 301
>gi|389846311|ref|YP_006348550.1| NAD-dependent epimerase/dehydratase [Haloferax mediterranei ATCC
33500]
gi|448616069|ref|ZP_21664779.1| NAD-dependent epimerase/dehydratase [Haloferax mediterranei ATCC
33500]
gi|388243617|gb|AFK18563.1| NAD-dependent epimerase/dehydratase [Haloferax mediterranei ATCC
33500]
gi|445750724|gb|EMA02161.1| NAD-dependent epimerase/dehydratase [Haloferax mediterranei ATCC
33500]
Length = 329
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR++ + +PG G + A+V D++S + + E
Sbjct: 154 NAMSIRPCIVYGPHDYTERLDYWIDRVLNYDRIVVPGDGTNIWHRAYVEDVASAMRVIAE 213
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
E + +N+ R VTL+ M ++ A AAG VE+VH + AA ++ +R
Sbjct: 214 EGEPGEA--YNVGDRRLVTLEEMVEVIADAAGTDVEVVHAGERELAAANLELTDFVLYRE 271
Query: 195 M-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
H + + A+ LGW ST + E ++ E++ RD
Sbjct: 272 YPHVLSTNKLAR--LGWESTP-VDEAMRRSVEDHRDSDRD 308
>gi|254168016|ref|ZP_04874864.1| hypothetical protein ABOONEI_163 [Aciduliprofundum boonei T469]
gi|289595956|ref|YP_003482652.1| NAD-dependent epimerase/dehydratase [Aciduliprofundum boonei T469]
gi|197623059|gb|EDY35626.1| hypothetical protein ABOONEI_163 [Aciduliprofundum boonei T469]
gi|289533743|gb|ADD08090.1| NAD-dependent epimerase/dehydratase [Aciduliprofundum boonei T469]
Length = 285
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
+NN + ++A+ V+QF++ISSA +Y EP ++ D P + K
Sbjct: 76 DNNIMGTINLLEYARKYDVEQFIYISSAAVY---GEPKYLPIDERHPTGPKSPYGLSKLT 132
Query: 73 SENFS---------NWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQ 118
E +S AS RP + + + F R + P+ I G G Q
Sbjct: 133 GERYSLLYSELYGLKVASIRPFNIFSPRQDPNSPYSGVISIFVSRAKKGLPLIIYGDGEQ 192
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
+ +V+D+ ++ LA+ + ++N + + +++ +AK+ A+ +G ++IVH
Sbjct: 193 TRDFVNVQDVVHLVKLALAK---KADGVYNCGTGKETSINELAKIIAELSGKGIKIVHDK 249
Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
P+ D +K+ YA+ A +I G+ TNL EDLK F
Sbjct: 250 PREG--DIRKS--------YADISKAIEI-GYEPKTNLKEDLKNYF 284
>gi|116620378|ref|YP_822534.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223540|gb|ABJ82249.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus
Ellin6076]
Length = 332
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 22/232 (9%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWA----S 81
+ +++F+SS Y D H E D + PD + E+ + + +
Sbjct: 94 LSRYIFMSSVAAY--GDGLNHKESDPLAPDYHPIPYTSHKATTERMLFRMHATSGLPVVT 151
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
FRP ++ G N E++F+DR+ RP+ IPG G + +V DL + + A++ P A
Sbjct: 152 FRPPFVYGPRTNYYREQFFWDRLRAGRPIIIPGDGHRLMQFVYVNDLVTAMVKAMDEPRA 211
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF--PFRNMHFYA 199
FN+ + VT + + A+ A + +V F P +Y
Sbjct: 212 VGE-AFNIGDPKPVTQVELVEKLAKVANVEPALVRVPRDVITQAGGNVFNEPLYFGEYYD 270
Query: 200 EPRAAKDI-----LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
P ++I + T LKE ++ YV+ + + A FE DDK+L
Sbjct: 271 LPPITENIGKVTRVLKMKLTPFETGLKETYKWYVRNHKARTA-GFEFDDKVL 321
>gi|432328689|ref|YP_007246833.1| nucleoside-diphosphate-sugar epimerase [Aciduliprofundum sp.
MAR08-339]
gi|432135398|gb|AGB04667.1| nucleoside-diphosphate-sugar epimerase [Aciduliprofundum sp.
MAR08-339]
Length = 292
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY 71
+ NN + ++A+ ++ F++ISSA IY + P E P + + + K
Sbjct: 73 YDAENNIIGTLNLLEYARRRDIEHFIYISSAAIYGEPEYLPIDEKHPKNPKSPY-GLSKL 131
Query: 72 ISENFS---------NWASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGM 117
E ++ AS RP + S F DR R P+ I G G
Sbjct: 132 TGETYAMMYGELYGLKVASIRPFNIFSPRQDPSSPYSGVISIFVDRAKRGLPLVIYGDGE 191
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 177
Q + +V D+ S++ + E ++ ++N + R ++++ +A++ + +G V I+H
Sbjct: 192 QTRDFVNVHDVVSLIKIV---SEKKATGVYNCATGREISINKLAEMIKELSGKDVPIMHD 248
Query: 178 DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
P+ D +++ YA+ A++ LG+ TNL EDL+ F
Sbjct: 249 KPRDG--DIRRS--------YADITRARN-LGFEPHTNLKEDLRRFF 284
>gi|448328965|ref|ZP_21518270.1| NAD-dependent epimerase/dehydratase [Natrinema versiforme JCM
10478]
gi|445614863|gb|ELY68527.1| NAD-dependent epimerase/dehydratase [Natrinema versiforme JCM
10478]
Length = 329
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
+ RP + G ++ + +W+ DR+ R V +PG G + V D++S L + E +
Sbjct: 157 AVRPPIVYGPHDHTERLDWWIDRVNRFDRVVVPGDGTNLRHRVFVEDVASALRIVAERGD 216
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFY 198
A + +N+ R VTL+ M L A++ V++VH P+ AAG +P + +
Sbjct: 217 AGEA--YNVGDRRLVTLEEMVDLIAESLETSVDLVHAGPRELAAGDIDLDDYPLYRSYPH 274
Query: 199 AEPRAAKDILGWRST 213
A LGW ST
Sbjct: 275 VLSTAKLAALGWEST 289
>gi|255657560|ref|ZP_05402969.1| hypothetical protein CdifQCD-2_18091 [Clostridium difficile
QCD-23m63]
gi|296452765|ref|ZP_06894454.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Clostridium
difficile NAP08]
gi|296879983|ref|ZP_06903953.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Clostridium
difficile NAP07]
gi|296258384|gb|EFH05290.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Clostridium
difficile NAP08]
gi|296428960|gb|EFH14837.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Clostridium
difficile NAP07]
Length = 312
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA-GHVQVEKYISENFSN---- 78
+ D+ +K+++ +S+ +YK + E + + + G + K +E+F
Sbjct: 83 LIDFISMDSLKKYIVLSAGAVYKDSGRNIKEENEKGENENWGKYGLNKKEAEDFVINSPI 142
Query: 79 -WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN-IAHVRDLSSMLTLAV 136
+ RP Y+ G NN E +FF++I + +P+P G Q +N ++ DL +L +
Sbjct: 143 PYIIIRPTYIYGENNNLYREYYFFEKIEKNEKIPVP-KGKQVSNQFIYIGDLVKVLESIM 201
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 196
+NP + +N+ + + ++ D + C + G I + D + + FPFRN+
Sbjct: 202 KNPHVREA--YNVTNPQLISWDDLIYTCGEVIGKEPIIKYVDMEKVEFRERTYFPFRNID 259
Query: 197 F 197
F
Sbjct: 260 F 260
>gi|448694126|ref|ZP_21696947.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
gi|445785615|gb|EMA36402.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
Length = 331
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+EN N S RP + G + + +++ DR+ R V IPG G + +V D++S L
Sbjct: 149 AENGVNAMSLRPPIVYGPHDYTERLDFWIDRVNRFDRVVIPGDGTNLWHRVYVEDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA--AGLPVEIVHYDPK---AAGIDAK 187
+ E E + +N R VT++ M +L A + VE+VH P+ A GI+ +
Sbjct: 209 RIVAERGEPGEA--YNTGDRRLVTIEEMVELIADQVDSTADVEVVHAGPRELAAGGIELE 266
Query: 188 KAFPFRNM-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 235
+R H A + A LGW ST L E + E++++ RD +
Sbjct: 267 DYPLYREYPHVMATNKLAD--LGWESTP-LEEAMARAVEDHLESDRDGR 312
>gi|156740225|ref|YP_001430354.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM
13941]
gi|156231553|gb|ABU56336.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM
13941]
Length = 334
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 94 KDCEEWFFD----RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
KD + F R++ + P+ + G G Q + +V D+ + LA +P AA IFNL
Sbjct: 197 KDARQTFLGIWIKRLIDEEPIQVFGDGSQIRDFNYVDDVVEAMLLAGASP-AADGGIFNL 255
Query: 150 VSDRAVTLDGMAKLCAQA-AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
SD + L +A L + G EIV + P ID +YA+ R + L
Sbjct: 256 GSDETINLRDLAALLVEINGGGSFEIVPFPPDRKVIDIGD--------YYADYRMIQGRL 307
Query: 209 GWRSTTNLPEDLKERFEEY 227
GWR +L E L+ E Y
Sbjct: 308 GWRPKVSLREGLRRTLEFY 326
>gi|126701231|ref|YP_001090128.1| hypothetical protein CD630_36040 [Clostridium difficile 630]
gi|254977233|ref|ZP_05273705.1| hypothetical protein CdifQC_18065 [Clostridium difficile QCD-66c26]
gi|255094562|ref|ZP_05324040.1| hypothetical protein CdifC_18181 [Clostridium difficile CIP 107932]
gi|255102821|ref|ZP_05331798.1| hypothetical protein CdifQCD-6_18561 [Clostridium difficile
QCD-63q42]
gi|255308640|ref|ZP_05352811.1| hypothetical protein CdifA_18761 [Clostridium difficile ATCC 43255]
gi|255316317|ref|ZP_05357900.1| hypothetical protein CdifQCD-7_18264 [Clostridium difficile
QCD-76w55]
gi|255518977|ref|ZP_05386653.1| hypothetical protein CdifQCD-_17798 [Clostridium difficile
QCD-97b34]
gi|255652157|ref|ZP_05399059.1| hypothetical protein CdifQCD_18365 [Clostridium difficile
QCD-37x79]
gi|260685125|ref|YP_003216410.1| hypothetical protein CD196_3396 [Clostridium difficile CD196]
gi|260688783|ref|YP_003219917.1| hypothetical protein CDR20291_3442 [Clostridium difficile R20291]
gi|306521884|ref|ZP_07408231.1| hypothetical protein CdifQ_20781 [Clostridium difficile QCD-32g58]
gi|384362801|ref|YP_006200653.1| hypothetical protein CDBI1_17660 [Clostridium difficile BI1]
gi|423082905|ref|ZP_17071487.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 002-P50-2011]
gi|423086428|ref|ZP_17074833.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 050-P50-2011]
gi|423089564|ref|ZP_17077921.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 70-100-2010]
gi|115252668|emb|CAJ70511.1| conserved hypothetical protein [Clostridium difficile 630]
gi|260211288|emb|CBA66856.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214800|emb|CBE07533.1| conserved hypothetical protein [Clostridium difficile R20291]
gi|357546861|gb|EHJ28766.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 050-P50-2011]
gi|357546984|gb|EHJ28883.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 002-P50-2011]
gi|357558041|gb|EHJ39553.1| NAD dependent epimerase/dehydratase family protein [Clostridium
difficile 70-100-2010]
Length = 312
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 10/181 (5%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV------KPDAGHVQVEKYISENFS 77
+ D+ +K+++ +S+ +YK + E + K + E +I +
Sbjct: 83 LIDFISMDNLKKYIVLSAGAVYKDSGRNIKEENEKGENENWGKYGLNKKEAEDFIINSPI 142
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN-IAHVRDLSSMLTLAV 136
+ RP Y+ G NN E +FF++I + +P+P G Q +N ++ DL +L +
Sbjct: 143 PYIIIRPTYIYGENNNLYREYYFFEKIEKNEKIPVP-KGKQVSNQFIYIGDLVKVLESIM 201
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 196
+NP + +N+ + + ++ D + C + G I + D + + FPFRN+
Sbjct: 202 KNPHVREA--YNVTNPQLISWDDLIYTCGEIIGKEPIIKYVDMEKVEFRERTYFPFRNID 259
Query: 197 F 197
F
Sbjct: 260 F 260
>gi|260063374|ref|YP_003196454.1| GDP-fucose synthetase [Robiginitalea biformata HTCC2501]
gi|88783468|gb|EAR14640.1| GDP-fucose synthetase [Robiginitalea biformata HTCC2501]
Length = 314
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 36/236 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N R+Q + A +GV +F+F+ S+ IY K A++P P EG + A
Sbjct: 84 NLRIQNNLIQAAHEAGVPKFVFLGSSCIYPKMAEQPIREDALLTGPLEPTNEGYALAKIA 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G ++ + ++ S P + G +N D E ++RK PV +
Sbjct: 144 GVRLIQALRDQYNRDYVSLMPTNLYGPNDNFDLETSHVLPALIRKFHEAKQNDNAPVTLW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
GSG HV DL+ + A+ENP +++N+ + +T+ +A+ + G E
Sbjct: 204 GSGSPRREFLHVDDLARAVVHALENP--LPDHLYNVGTGSDITIKELARTVQRIVGHTGE 261
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
I +D +K ++H LGW++ L + +K +E Y++
Sbjct: 262 I-RWDTSKPDGTPRKLLDVSHIH----------ALGWKAEIGLEDGIKRAYEWYLE 306
>gi|448378891|ref|ZP_21560887.1| NAD-dependent epimerase/dehydratase [Haloterrigena thermotolerans
DSM 11522]
gi|445665914|gb|ELZ18587.1| NAD-dependent epimerase/dehydratase [Haloterrigena thermotolerans
DSM 11522]
Length = 329
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
RP + G + + W+ DR+ R V +PG G ++ +V D+++ L + E +
Sbjct: 159 RPPIVYGPHDYTERLNWWIDRVNRFDRVVVPGDGTNLRHLVYVEDVAAALRIVAERGDPG 218
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYAE 200
+ +N+ R V L+ + L A A VEIVH P+ AAG + + +P + +
Sbjct: 219 EA--YNVGDRRLVPLEELVDLLADALETDVEIVHAGPRELAAGEISLEDYPLYRSYPHVL 276
Query: 201 PRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
A LGW ST L + L +++++ RD
Sbjct: 277 STAKLAGLGWESTP-LEDSLARTVDDHLESDRD 308
>gi|375145657|ref|YP_005008098.1| UDP-glucuronate 5'-epimerase [Niastella koreensis GR20-10]
gi|361059703|gb|AEV98694.1| UDP-glucuronate 5'-epimerase [Niastella koreensis GR20-10]
Length = 326
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 22/225 (9%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
N N + + ++A+ +KQFLF SS+ +Y + P E D + P + + KY SE
Sbjct: 100 NVNIGGTQALLEFARKRNIKQFLFASSSSVYGVSPNVPWNENDRMLPISPYA-CSKYASE 158
Query: 75 NFS---------NWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAH 124
F + + R + G D FF+ I +K+P+ I G+G + +
Sbjct: 159 MFGYTYSHLYKIRFIALRFFTVYGPAQRPDLAIHKFFNCIHQKKPITIFGNGDTARDYTY 218
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
+ D+ + A++ +A+ +FNL + R V+L+ + + Q G I+ Y P+ G
Sbjct: 219 IDDIVQGIIAAID-YDASDFEVFNLGNHRTVSLNNLIRNIEQICG-SRAILQYYPEQPG- 275
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
P YA+ A +L ++ +T+L L + Y K
Sbjct: 276 ----DVPLT----YADIGKAVSLLNYKPSTDLLSGLGNFYNWYTK 312
>gi|367469600|ref|ZP_09469343.1| UDP-glucose 4-epimerase [Patulibacter sp. I11]
gi|365815321|gb|EHN10476.1| UDP-glucose 4-epimerase [Patulibacter sp. I11]
Length = 464
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 14/130 (10%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R R P+ I GSG Q + +V DL+ + A+ P+AA +NL SD T+ G
Sbjct: 189 FVGRARRGEPLTIAGSGEQERSFVYVEDLAEGVVRAL-APQAA-GRTYNLGSDETTTIRG 246
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A++ PVEIVH + +A + + RN A D LGWR++T L E
Sbjct: 247 LAEVVRDVVA-PVEIVHTEGRAGDL---RGTTIRNQR-------AADELGWRASTPLREG 295
Query: 220 LKERFEEYVK 229
++ R+ +V+
Sbjct: 296 VR-RYAAWVE 304
>gi|448365901|ref|ZP_21554155.1| NAD-dependent epimerase/dehydratase [Natrialba aegyptia DSM 13077]
gi|445654510|gb|ELZ07361.1| NAD-dependent epimerase/dehydratase [Natrialba aegyptia DSM 13077]
Length = 329
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 18/186 (9%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E N S RP + G + +++ DR+ R + IPG G + A+V D++S L
Sbjct: 149 AERGVNAMSVRPCVVYGPHDYTARLDFWIDRVNRFDRILIPGDGTNVWHRAYVDDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKA 189
L E A+ +N+ R VT++ M L A A V++VH P+ AA I+
Sbjct: 209 RLVAER--GAAGEAYNVGDRRLVTIEEMIDLIADALETTVDVVHAGPRELAAAEIELADY 266
Query: 190 FPFRNM-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI---------GRDKKAMQF 239
+R H + + A+ LGW ST L + + E+++ GRD +A
Sbjct: 267 PLYREYPHILSTAKLAE--LGWESTP-LETAMDQSVEDHLASDRTGRENGPGRDAEARVL 323
Query: 240 EIDDKI 245
EI D +
Sbjct: 324 EILDTV 329
>gi|358635412|dbj|BAL22709.1| hypothetical protein AZKH_0363 [Azoarcus sp. KH32C]
Length = 305
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 31/210 (14%)
Query: 35 QFLFISSAG-IYKPADEPPHVEGDVVKP----DAGHVQVEKYISE---NFSNWAS-FRPQ 85
+ L++SS G +Y A P E +++P AG E +IS FS+ A+ RP
Sbjct: 107 ELLYLSSGGTLYGDAGADPATEHHIIRPKSYYGAGKAAAEHFISAWTAQFSSRATILRPS 166
Query: 86 YMIGSGNNKDCEEWF------FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
+ G G + + F D ++ P+PI G G + ++ D + + P
Sbjct: 167 NLYGPG--QTIRQGFGIVPTALDAAMKGTPLPIWGDGSTVRDYLYIVDFIRLCLDILAAP 224
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF--PFRNMHF 197
A + I N S V+L+ + G P+ HY P + +D + P R H
Sbjct: 225 MPAGTQIMNAASGHGVSLNELLAHIETVTGKPMT-RHYQPGRS-VDVSRIVLSPERAQHR 282
Query: 198 YAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
Y GW +TT+LP L+ + Y
Sbjct: 283 Y----------GWSATTSLPTGLERTWAWY 302
>gi|254168150|ref|ZP_04874997.1| hypothetical protein ABOONEI_767 [Aciduliprofundum boonei T469]
gi|197622916|gb|EDY35484.1| hypothetical protein ABOONEI_767 [Aciduliprofundum boonei T469]
Length = 285
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 33/226 (14%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
+NN + ++A+ V+QF++ISSA +Y EP ++ D P + K
Sbjct: 76 DNNIMGTINLLEYARKYDVEQFIYISSAAVY---GEPKYLPIDERHPTGPKSPYGLSKLT 132
Query: 73 SENFS---------NWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQ 118
E +S AS RP + + + F R + P+ I G G Q
Sbjct: 133 GERYSLLYSELYGLKVASIRPFNIFSPRQDPNSPYSGVISIFVSRAKKGLPLIIYGDGEQ 192
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
+ +V+D+ ++ LA+ + ++N + + +++ +AK+ A+ +G ++IVH
Sbjct: 193 TRDFVNVQDVVHLVKLALTK---NADGVYNCGTGKETSINELAKIIAELSGKDIKIVHDK 249
Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
P+ I A+ + EP+ TNL EDLK F
Sbjct: 250 PREGDIRKSYAYISKAREIEYEPK-----------TNLKEDLKIYF 284
>gi|56965485|ref|YP_177218.1| RNA-binding protein [Bacillus clausii KSM-K16]
gi|56911730|dbj|BAD66257.1| RNA-binding protein [Bacillus clausii KSM-K16]
Length = 320
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 31 SGVKQFLFISSAGIYKPAD-----EPPHVEGDVVKPDAGHVQVEKYISENF----SN--- 78
+ ++++LF+SS +Y P+D + P E G + K +E+F +N
Sbjct: 90 TKLERYLFLSSGSVYCPSDTIFLEDSPRGENS----HWGKYGLNKKEAEDFLISKANEIP 145
Query: 79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
+ FRP Y+ G GNN E +FF + P+ IP S I H+ D+ + EN
Sbjct: 146 FVIFRPPYIYGEGNNLYREAYFFYNMALGNPILIPESNTNVQFI-HIADVLRTILATFEN 204
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG---IDAKKAFPFRNM 195
A + +NL +T + + P +I+ + K I +K+ FPFR++
Sbjct: 205 RHAVCQS-YNLAHRETITWKSLMSTFKKITNSPSKIIEVEQKFLTENEIGSKQFFPFRDV 263
Query: 196 HFYAE-PRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+ + + KD L NL + L ER ++ K RD
Sbjct: 264 SYLMDTTKLTKDGLP-TPAINLEKGL-ERSYKWFKQQRD 300
>gi|336255178|ref|YP_004598285.1| NAD-dependent epimerase/dehydratase [Halopiger xanaduensis SH-6]
gi|335339167|gb|AEH38406.1| NAD-dependent epimerase/dehydratase [Halopiger xanaduensis SH-6]
Length = 329
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E N + RP + G + + +++ DR+ V +PG G + +V D++S L
Sbjct: 149 AEEGVNAMAVRPPIVYGPHDYTERLDFWIDRVNEYDRVIVPGDGTNVWHRVYVEDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKA 189
+ E E S +N+ R VTL+ M +L A A V+IVH P+ AA +
Sbjct: 209 RIVAERGE--SGEAYNVGDRRIVTLEEMVELIADALETSVDIVHAGPRELEAADLSLDDY 266
Query: 190 FPFRNM-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+R+ H + + A LGW ST L E ++ ++++ RD
Sbjct: 267 VLYRDYPHVLSTAKLAA--LGWESTP-LEEAMERSVADHLESDRD 308
>gi|284166451|ref|YP_003404730.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM
5511]
gi|284016106|gb|ADB62057.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM
5511]
Length = 329
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E N S RP + G + + +W+ DR+ R V +PG G + A+V D++S L
Sbjct: 149 AEQGVNAMSVRPPVVYGPHDYTERLDWWIDRVNRFDRVVVPGDGTNVWHRAYVEDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAG-IDAKKA 189
+ E E + +N+ R VTL M +L A +EIV P+ AAG I+
Sbjct: 209 RIVAERGEPGEA--YNVGDRRLVTLAEMVELIADRLATDIEIVTAGPRELAAGDIELDDY 266
Query: 190 FPFRNM-HFYAEPRAAKDILGWRST 213
+R+ H + + A LGW +T
Sbjct: 267 VLYRDYPHVLSTAKLAD--LGWEAT 289
>gi|392940483|ref|ZP_10306127.1| LOW QUALITY PROTEIN: nucleoside-diphosphate-sugar epimerase
[Thermoanaerobacter siderophilus SR4]
gi|392292233|gb|EIW00677.1| LOW QUALITY PROTEIN: nucleoside-diphosphate-sugar epimerase
[Thermoanaerobacter siderophilus SR4]
Length = 316
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 10 ALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE 69
++F N + + + SGVK+ ++ SSA +Y + P E V P + +
Sbjct: 85 SVFDAKGNVLGTVNLLECCRKSGVKKIVYASSAAVYGNPEYLPIDEKHKVNP-ISYYGIS 143
Query: 70 KYISENF---------SNWASFRPQYMIGSGNNKDCE----EWFFDRIVR-KRPVPIPGS 115
K+ +E++ + R + G + E F D++++ +RP+ I G
Sbjct: 144 KHTAEHYFEVYRQLYGLKYTILRYANVYGIRQDPKGEGGVISIFTDKMLKGERPI-IFGD 202
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G Q + +V+D+ LA+E + + N+ +++ +++ + ++ + +E V
Sbjct: 203 GNQTRDFVYVKDVVKANLLALER---GDNEVVNISTNKPTSINELVEMMNKIMNTSLEPV 259
Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY-VKIGRDK 234
+ +P+ I +H Y + + A ++LGW+ +L E LKE E Y VK D+
Sbjct: 260 YTEPRKGDI----------VHSYLDNKKALEVLGWKPEYSLEEGLKETIEYYRVKYVEDE 309
Query: 235 KAM 237
A+
Sbjct: 310 VAV 312
>gi|374595736|ref|ZP_09668740.1| NAD-dependent epimerase/dehydratase [Gillisia limnaea DSM 15749]
gi|373870375|gb|EHQ02373.1| NAD-dependent epimerase/dehydratase [Gillisia limnaea DSM 15749]
Length = 316
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 50/253 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP---PHVEGDVVKPD---------A 63
N ++Q + D A + V++F+F+ S+ IY K A +P ++ D ++P A
Sbjct: 84 NLQIQNNLIDTAHKAEVEKFIFLGSSCIYPKLAPQPLKEEYLLTDSLEPTNEWYAIAKIA 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G E + ++ S P + GS +N D E ++RK PV +
Sbjct: 144 GVKACEAIRKQFGKDFVSLMPTNLYGSRDNFDLETSHVLPAMIRKFQDAKVNGNVPVELW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
GSG HV D++ + A+EN PE +++N+ + + +T+ +A+ + G
Sbjct: 204 GSGTPMREFLHVDDMADAVVFALENKLPE----HLYNIGTGKDLTIKELAETIQEITGHN 259
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEE 226
EI+ + K G PR D+ GW++TTNL + +++ ++
Sbjct: 260 GEIIWDNSKPDGT----------------PRKLMDVSKMKSAGWQATTNLEDGIQKTYKW 303
Query: 227 YVKIGRDKKAMQF 239
+++ + K ++
Sbjct: 304 FLQNSENYKQVKL 316
>gi|163847195|ref|YP_001635239.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus
J-10-fl]
gi|222525035|ref|YP_002569506.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl]
gi|163668484|gb|ABY34850.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus
J-10-fl]
gi|222448914|gb|ACM53180.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl]
Length = 337
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 31/223 (13%)
Query: 26 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWAS 81
D A+ + V +F+++SS+ +Y A P E P G + E Y + W S
Sbjct: 106 DLARRADVPRFVYVSSSEVYGTARWVPMTEEHPTYPMTVYGGGKLAGECYTR---AFWES 162
Query: 82 FR-PQYMI-----------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 129
+R P ++ G++ + F R + P+ I G G Q + +V D +
Sbjct: 163 YRYPTVVVRPFNSFGPRSHHEGDSGEVIPKFMLRAMAGLPMVIFGDGTQTRDFTYVSDTA 222
Query: 130 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD-PKAAGIDAKK 188
+ LA +AA FNL R ++++ +A+ A G P + YD P+
Sbjct: 223 RGIMLA-GMVDAAIGGTFNLGQGREISINELARTVATVVGRPDAAIVYDIPR-------- 273
Query: 189 AFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG 231
P + YA+ A+ +LG+ T +L E L+ E Y+ G
Sbjct: 274 --PGDVLRLYADSTRAQHVLGFTPTVSLQEGLQRLQEWYLSRG 314
>gi|312880523|ref|ZP_07740323.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM
12260]
gi|310783814|gb|EFQ24212.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM
12260]
Length = 311
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 31/226 (13%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS------ 77
V + A+S+G ++ +F SSAGI+ P E V+PD+ + K +E
Sbjct: 103 VLEAARSAGCRKVVFSSSAGIFGELKTLPIAEDHPVEPDSPY-GCTKLCAEKLCLAYAKL 161
Query: 78 -NWASFRPQYMIGSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
+ + +Y G + + + F +I+R P+ + G G Q + HVRD+
Sbjct: 162 YDLEAVALRYFNVYGPRQRFDAYGNVIPIFVFQILRGEPITVFGDGEQTRDFVHVRDVVQ 221
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
A + E S FN+ S +TL+ + L + GL +++ P+
Sbjct: 222 ANVKAALSREV--SGAFNIASGTRITLNDLVDLLRE-TGLSPKVLSGPPR---------- 268
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKA 236
P H A+ R A+ +LG+ DL+E +EYV R++ A
Sbjct: 269 PGDVRHSLADLRQARTLLGFEPRV----DLREGLKEYVAWAREEAA 310
>gi|304316399|ref|YP_003851544.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777901|gb|ADL68460.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 319
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F D+++ + I G G Q + +V+D++ LA+EN + I N+ +++A T++
Sbjct: 187 FIDKMLSGKNPVIFGDGNQTRDFIYVKDVAKANLLALEN---GDNEIINISTNKATTINE 243
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+ + + ++ ++ +P+ I +H Y + + AKD+LGW+ L +
Sbjct: 244 LVNIMNKIMNASLKPIYAEPRKGDI----------VHSYLDNKKAKDVLGWKPDYELEDG 293
Query: 220 LKERFEEY 227
LKE E Y
Sbjct: 294 LKETVEYY 301
>gi|163816636|ref|ZP_02207999.1| hypothetical protein COPEUT_02826 [Coprococcus eutactus ATCC 27759]
gi|158447893|gb|EDP24888.1| NAD dependent epimerase/dehydratase family protein [Coprococcus
eutactus ATCC 27759]
Length = 300
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 15/214 (7%)
Query: 24 VADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGD--VVKPDAGHVQVEKYISEN----- 75
+ D S G Q++ ISS+ +Y + P E + G +K +E+
Sbjct: 75 ITDLCDSLGSFGQYIMISSSAVYPEYGDQPFREDSERALNRYWGSYGTDKIAAEDALLDR 134
Query: 76 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
S+ RP Y+ G NN E + FD RP +PG G HV+DL ++
Sbjct: 135 VSDAYILRPPYIYGPMNNVYREAFVFDCARADRPFYLPGDGGMKLQFFHVKDLCILMERV 194
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 195
+E E ++I N+ + VT+ +C +I + + I+ + F F N
Sbjct: 195 IE--EKLETHIMNVGNVEPVTIKDWVTMCYACFD---KIPAFVNVSEDIEQRNYFSFYNY 249
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+Y + + I + T +L + LKE E YV+
Sbjct: 250 EYYLDVQQQNKI--YPETISLEDGLKECAEWYVE 281
>gi|448455930|ref|ZP_21594862.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
gi|445813149|gb|EMA63131.1| NAD-dependent epimerase/dehydratase [Halorubrum lipolyticum DSM
21995]
Length = 333
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 36 FLFISSAGIYKPADEPPHVEGDV-VKP----DAGHVQVEKY-------------ISENFS 77
++++SS Y A+E P EG+ ++P A + E Y +E
Sbjct: 99 YVYVSSGDSYA-AEEIPKREGETPLRPCTPEQATDDESETYGNRKAEGDRAVFAAAEEGV 157
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
+ + RP + G + + +++ DR++ + V +PG G + A+V D++S L + E
Sbjct: 158 DATAVRPCIVYGPYDYTERLDYWIDRVLSRDRVVVPGDGQNLWHRAYVEDVASALRIVAE 217
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
EA + +N+ RA+TL+ + A AAG+ EIV A G++ +R
Sbjct: 218 RGEAGRA--YNVGDRRALTLEETLETIADAAGVDCEIVTASADALAAGGLEPDDFVLYRE 275
Query: 195 MHFYAEPRAAKDILGWRST 213
+ A D LGW ST
Sbjct: 276 YPHLLDTCALAD-LGWEST 293
>gi|429193538|ref|YP_007179216.1| nucleoside-diphosphate-sugar epimerase [Natronobacterium gregoryi
SP2]
gi|448323913|ref|ZP_21513357.1| NAD-dependent epimerase/dehydratase [Natronobacterium gregoryi SP2]
gi|429137756|gb|AFZ74767.1| nucleoside-diphosphate-sugar epimerase [Natronobacterium gregoryi
SP2]
gi|445620053|gb|ELY73562.1| NAD-dependent epimerase/dehydratase [Natronobacterium gregoryi SP2]
Length = 329
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E + S RP + G + + +++ DR+ R V +PG G + +V D++S L
Sbjct: 149 AEEGVDAMSLRPPIVYGPHDYTERLDFWIDRVNRFDRVVVPGDGTNIWHRVYVEDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAF 190
+ E + + +N R VTL+ M +L A VEIVH P+ AG + +
Sbjct: 209 RIVAERGDPGEA--YNTGDRRLVTLEEMVELIADQLDTDVEIVHAGPRELEAGDIELEDY 266
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV---KIGRDKKAMQFEIDDKILE 247
P + + A LGW ST L E + E+++ ++GR + + E ++++L
Sbjct: 267 PLYRDYPHVMSTAKLADLGWESTP-LEEAMGRAVEDHLESDRVGR-ENGPEREAEERVLG 324
Query: 248 SLKV 251
L+
Sbjct: 325 ILET 328
>gi|148657967|ref|YP_001278172.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1]
gi|148570077|gb|ABQ92222.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1]
Length = 335
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 94 KDCEEWFFD----RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
KD + F R++ + P+ + G G Q + +V D+ L LA + AA IFNL
Sbjct: 197 KDARQTFLGIWIKRLIDEEPIQVFGDGSQIRDFNYVDDVVEALLLAGAS-SAADGGIFNL 255
Query: 150 VSDRAVTLDGMAKLCAQA-AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
SD + L +A L G EIV + P ID +YA+ R + L
Sbjct: 256 GSDETINLRDLAALLIDINGGGSFEIVPFPPDRKAIDIGD--------YYADYRLIQGRL 307
Query: 209 GWRSTTNLPEDLKERFEEY 227
GWR L E L+ E Y
Sbjct: 308 GWRPKVPLREGLRRTLEFY 326
>gi|56552270|ref|YP_163109.1| NAD-dependent epimerase/dehydratase [Zymomonas mobilis subsp.
mobilis ZM4]
gi|56543844|gb|AAV89998.1| NAD-dependent epimerase/dehydratase [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 317
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISEN--FSNW--ASFRP 84
V+ FLF SS +Y P E D P G + E ++ + + + FRP
Sbjct: 98 VEHFLFCSSIWVYGRYFSIPSTEADSPNPIDEYGRGKAESEAWLLQEARLTGFPATCFRP 157
Query: 85 QYMIGSG-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
+++G G N + E F I R + +P G++ + H D++ + LA+E
Sbjct: 158 GHIVGEGWVPISPIGNANPET--FSLIARGDELVLPNLGLEMVHHVHADDVAQWIVLAIE 215
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAK 162
N A+ +FN VS++A+ L G A+
Sbjct: 216 NRAASVGEVFNTVSEQAINLRGYAE 240
>gi|291301968|ref|YP_003513246.1| NAD-dependent epimerase/dehydratase [Stackebrandtia nassauensis DSM
44728]
gi|290571188|gb|ADD44153.1| NAD-dependent epimerase/dehydratase [Stackebrandtia nassauensis DSM
44728]
Length = 316
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 28 AKSSGVKQFLFISSAGIYKP-----------ADEPPHVEGDVVKPDA-GHVQV--EKYIS 73
A S V ++LFISS +Y P A +PP D + + G ++V E +
Sbjct: 83 ALSGRVGRYLFISSHAVYSPEGAVPDSDESAARKPPLARADEIDNETYGRLKVGCEDAVL 142
Query: 74 ENFSNWASF-RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+ F A+ RP + G +N+D ++ R R V +P Q + RDL+ ++
Sbjct: 143 KRFGAGATIVRPGRVAGPYDNQDVFTYWVRRAARGGKVALPADPRQPVQVVDSRDLARLV 202
Query: 133 T--LAVENPEAASSNIFNLVS-DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
LA + P A FN V VT G+ ++CA AAG VEIV +AA
Sbjct: 203 VRLLADDRPGA-----FNAVGPAEPVTFAGLIEICAAAAGSRVEIVPVPAEAA 250
>gi|424827686|ref|ZP_18252457.1| hypothetical protein IYC_06089 [Clostridium sporogenes PA 3679]
gi|365979954|gb|EHN15999.1| hypothetical protein IYC_06089 [Clostridium sporogenes PA 3679]
Length = 728
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-NW--------ASFR 83
VK+F+F SSA IY + P E ++ +P + + + KY+ E + W FR
Sbjct: 108 VKKFIFASSAAIYGNNENIPLTEREIAEPLSPY-GISKYVGEGYCKKWNEIYNLDTICFR 166
Query: 84 -------PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
Q +IG G F D I + + + + G G Q + +V DL+ L A
Sbjct: 167 FSNVYGPRQGIIGEGG---VVSIFMDNITKDQEITLNGDGEQTRDFIYVSDLTDALFKAA 223
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 196
E+ SS ++NL ++ +L+ + K+ + I D K D K H
Sbjct: 224 ESN--ISSGVYNLSTNSRSSLNNLIKILNNLKNIKGIIKKEDRKG---DIK--------H 270
Query: 197 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYV------KIGRDKKAMQFEIDDKI 245
+ K LGW +L + +K F+ Y + +KK +++ DDKI
Sbjct: 271 SSLDNTKIKKALGWIPMVSLEQGIKNTFDWYSTNYKVEESNTEKKKLKY--DDKI 323
>gi|448390518|ref|ZP_21566141.1| NAD-dependent epimerase/dehydratase [Haloterrigena salina JCM
13891]
gi|445666932|gb|ELZ19584.1| NAD-dependent epimerase/dehydratase [Haloterrigena salina JCM
13891]
Length = 329
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E N S RP + G + + +W+ DR+ R V +PG G + A+V D++S L
Sbjct: 149 AEQGVNAMSVRPPVVYGPHDYTERLDWWIDRVNRFDRVVVPGDGTNVWHRAYVEDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKA 189
+ E E + +N+ R VTL M +L A VEIV P+ A I+
Sbjct: 209 RIVAERGEPDEA--YNVGDRRLVTLAEMVELIADRLETDVEIVTAGPRELAAGDIELDDY 266
Query: 190 FPFRNM-HFYAEPRAAKDILGWRSTT 214
+R+ H + + A LGW +T+
Sbjct: 267 VLYRDYPHVLSTAKLAD--LGWEATS 290
>gi|448319353|ref|ZP_21508852.1| NAD-dependent epimerase/dehydratase [Natronococcus amylolyticus DSM
10524]
gi|445607956|gb|ELY61827.1| NAD-dependent epimerase/dehydratase [Natronococcus amylolyticus DSM
10524]
Length = 232
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
S RP + G + + +++ DR+ R V +PG G + A+V D++S L L E +
Sbjct: 60 SVRPCIVYGPHDYTERLDFWIDRVNRFDRVVVPGDGTNLWHRAYVEDVASALRLVAEEGD 119
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-H 196
A + +N+ R VTL+ M L A VE+V P+ A I+ +R H
Sbjct: 120 AGEA--YNVGDRRLVTLEEMVTLIADQLDTTVEVVTAGPRELEAGSIEPDDYVLYREYPH 177
Query: 197 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+ + A LGW ST + E + E++++ RD
Sbjct: 178 VLSTAKLAA--LGWESTP-IGEAMARSVEDHLESDRD 211
>gi|406936590|gb|EKD70274.1| hypothetical protein ACD_46C00581G0009 [uncultured bacterium]
Length = 337
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 37/225 (16%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP-------------DAGHVQVEKY-IS 73
A+ +GV++FLF SS G+Y PA+ E DV K G +Q E Y I
Sbjct: 106 ARRAGVERFLFTSSVGVYSPAE--IFYEDDVWKTFPSPSDRFAGWAKRMGELQAEAYKIE 163
Query: 74 ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR------PVPIPGSGMQFTNIAHVRD 127
N+ + RP + G +N D + KR P+ + G G + H RD
Sbjct: 164 YNWDKISIVRPANVYGPFDNFDPANAMVIPSLIKRAMDGENPLTVWGDGSPIRDFIHARD 223
Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL-CAQAAGLPVEIVHYDPKAAGIDA 186
++ + LAVE + NL S VT+ +A++ A G P+EIV K G DA
Sbjct: 224 VACGMMLAVEK---GINEPINLGSGTGVTIKEIAEIVAANVPGGPIEIVWDITKPKG-DA 279
Query: 187 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG 231
K+ + Y G++ ++ + + E E + K G
Sbjct: 280 KRLMDMTRANSY----------GFKPEISIEQGIIETIEWFAKNG 314
>gi|433589815|ref|YP_007279311.1| nucleoside-diphosphate-sugar epimerase [Natrinema pellirubrum DSM
15624]
gi|448332587|ref|ZP_21521818.1| NAD-dependent epimerase/dehydratase [Natrinema pellirubrum DSM
15624]
gi|433304595|gb|AGB30407.1| nucleoside-diphosphate-sugar epimerase [Natrinema pellirubrum DSM
15624]
gi|445626016|gb|ELY79366.1| NAD-dependent epimerase/dehydratase [Natrinema pellirubrum DSM
15624]
Length = 329
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
RP + G + + W+ DR+ V +PG G ++ +V D+++ L + E E
Sbjct: 158 VRPPIVYGPHDYTERLNWWVDRVNHFDRVVVPGDGTNLRHLVYVEDVAAALRIVAERGEP 217
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFYA 199
+ +N+ R V L+ + + A A VEIVH P+ AAG + + +P + +
Sbjct: 218 GEA--YNVGDRRLVPLEELVERLADALETDVEIVHAGPRELAAGEISLEDYPLYRSYPHV 275
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
A LGW ST L + L +++++ RD
Sbjct: 276 LSTAKLAGLGWESTP-LEDSLARTVDDHLESDRD 308
>gi|392945316|ref|ZP_10310958.1| nucleoside-diphosphate-sugar epimerase [Frankia sp. QA3]
gi|392288610|gb|EIV94634.1| nucleoside-diphosphate-sugar epimerase [Frankia sp. QA3]
Length = 325
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 95/226 (42%), Gaps = 39/226 (17%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKP----ADEPPHVE-GDVVKPDAGHVQVEKYISENFSN 78
V + A+ +GV + LF S+ +Y AD P E ++ AGHV ++
Sbjct: 94 VCEAARQAGVGRVLFASTVWVYGAVGERADPAPLTEDAEITLGRAGHVYTSTKLAAELL- 152
Query: 79 WASFRPQYMI-----------GSGNNKDCEEWFFDRIVRK----RPVPIPGSGMQFTNIA 123
S++ Y + G G +E R VRK + + G G QF N
Sbjct: 153 LHSYQQTYGLPFTILRYGIPYGPGMR---DELVLARFVRKALDGESLTVAGDGQQFRNYV 209
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK-LCAQAAGLPVEIVHYDPKAA 182
VRDL+ LA+ PEA ++ I L AV++ MA+ +C G +E V P
Sbjct: 210 FVRDLADAHVLAL-RPEAENATI-ALEGAEAVSVLEMAQAVCQHFPGTAIEHVPARPG-- 265
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
FR A R A D+LGWR TT + +++ E Y+
Sbjct: 266 --------DFRGREVSA--RRALDLLGWRPTTPFTDGVRQYIEWYL 301
>gi|256752410|ref|ZP_05493269.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748679|gb|EEU61724.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus
CCSD1]
Length = 316
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF------- 76
+ + +KS VK+ ++ SSA +Y + E V P + + K+ E++
Sbjct: 99 LLECSKSYKVKKIIYASSAAVYGDPEYLAIDEKHKVDP-ISYYGISKHTPEHYFEVYRQL 157
Query: 77 --SNWASFRPQYMIGSGNNKDCE----EWFFDRIVR-KRPVPIPGSGMQFTNIAHVRDLS 129
+ R + G + E F D+I++ +RP+ I G G Q + +V+D++
Sbjct: 158 YGLKYTILRYANVYGIRQDPKGEGGVISIFVDKILKDERPI-IFGDGNQTRDFVYVKDVA 216
Query: 130 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 189
LA+E + I N+ +++ +++ + L + G ++ ++ +P+ I
Sbjct: 217 KANLLALEK---GDNEIVNISTNKPTSINELIDLMNKIMGTSLKPIYAEPRKGDI----- 268
Query: 190 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY-VKIGRDKKAM 237
+H Y + + A D+LGW+ +L E L+E E Y VK D+ A+
Sbjct: 269 -----VHSYLDNKKALDVLGWKPEYSLEEGLRETIEYYRVKYAEDEVAI 312
>gi|302389089|ref|YP_003824910.1| NAD-dependent epimerase/dehydratase [Thermosediminibacter oceani
DSM 16646]
gi|302199717|gb|ADL07287.1| NAD-dependent epimerase/dehydratase [Thermosediminibacter oceani
DSM 16646]
Length = 309
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 95/241 (39%), Gaps = 46/241 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP---PHVEGDVVKPD---------A 63
N +Q + D A GVK+ LF+ S+ IY K A +P H+ ++P
Sbjct: 84 NLLIQTNIIDAAYRYGVKKLLFLGSSCIYPKFAPQPIKEEHLLTGALEPTNEPYAIAKIV 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW---------FFDRIVRKRP-VPIP 113
G + Y + +N+ S P + G G+N D E F + V P V +
Sbjct: 144 GIKMCQAYNKQYGTNFISVMPTNLYGPGDNFDLETSHVLPALIRKFHEAKVAGAPHVVVW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
GSG HV DL+ + N + SS I N+ + +T+ +A L + G E
Sbjct: 204 GSGTPRREFLHVDDLADACLFLMNNYD--SSEIINIGVGKDLTIAELANLIKEIVGYKGE 261
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEYV 228
IV K G PR D+ LGWR L + ++ +E Y+
Sbjct: 262 IVFDTSKPDG----------------TPRKLLDVSKLFNLGWRPRIRLEDGIRSTYEWYM 305
Query: 229 K 229
+
Sbjct: 306 Q 306
>gi|320160985|ref|YP_004174209.1| putative UDP-glucose 4-epimerase [Anaerolinea thermophila UNI-1]
gi|319994838|dbj|BAJ63609.1| putative UDP-glucose 4-epimerase [Anaerolinea thermophila UNI-1]
Length = 308
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 34/232 (14%)
Query: 11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAG------IYKPADEPPHVEGDVVKPDAG 64
L+ + N R + + + GV++ ++ISS G +Y P DE H +
Sbjct: 86 LYDADVNVRGSVHLLELCREYGVRKIIYISSGGAVYGEPVYLPCDEE-HPVRPLCPYGLT 144
Query: 65 HVQVEKYI---SENFS-NWASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSG 116
E Y+ +N+ ++ FR + G + E F +++R PV I G+G
Sbjct: 145 KYAFELYLYIYQQNYGIDYTVFRYPNVYGPRQDPLGEAGVIAIFTGQMLRGEPVTIYGTG 204
Query: 117 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM---AKLCAQAAGLPVE 173
Q + HV D + LA+ E+ S ++NL S + T++ + K +G+P
Sbjct: 205 DQVRDYVHVYDCARANLLAL---ESGSGRVYNLGSGKGTTVNELFQRLKAITGYSGMP-- 259
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
+Y P G Y + AK+ LGW T +L E L+ E
Sbjct: 260 --NYAPAKLG---------ETFKIYLNAQRAKEELGWVPTISLEEGLRNTVE 300
>gi|399035188|ref|ZP_10732652.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF122]
gi|398066886|gb|EJL58433.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF122]
Length = 322
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKP-DA---GHVQVEKYISENFSNWA----SFRP 84
++ +LF S+ +Y P E D P DA G + E ++ FRP
Sbjct: 98 IEHYLFCSTIWVYGRLFTMPSTEADPTNPIDAYGRGKAESEAWLMRQARVAGFPATCFRP 157
Query: 85 QYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
+++G G N + F +I R + +P G++ + H D++ + A++N
Sbjct: 158 GHIVGEGWNPINPIGNANPEIFSQIARGDELVLPNLGLETVHHVHADDVARWIIAAIDNR 217
Query: 140 EAASSNIFNLVSDRAVTLDGMAK 162
A+ +FN+VS++AVTL G A+
Sbjct: 218 AASIGEVFNIVSEQAVTLRGYAE 240
>gi|408490891|ref|YP_006867260.1| GDP-L-fucose synthetase [Psychroflexus torquis ATCC 700755]
gi|408468166|gb|AFU68510.1| GDP-L-fucose synthetase [Psychroflexus torquis ATCC 700755]
Length = 245
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 40/237 (16%)
Query: 18 FRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDAG 64
F +Q + D A S+ K+F+F+ S+ IY K A +P P E + AG
Sbjct: 14 FTIQNNLIDTAHSTEAKKFIFLGSSCIYPKLAPQPLKKEYLLTGSLEPTTEWYAIAKIAG 73
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIPG 114
+ E + ++ S P + G +N D + ++RK PV + G
Sbjct: 74 VMACEAIRKQYGRDFVSLMPTNLYGPNDNFDLKTSHVLPAMIRKFHEAKLNNNEPVELWG 133
Query: 115 SGMQFTNIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
SG HV D++ + A+EN PE +++N+ + + +T+ +A+ + G
Sbjct: 134 SGTPIREFLHVDDMADAVVFALENKLPE----HLYNIGTGKDLTIKELAETIQKVVGHNG 189
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
EIV K G P + M+ +A GW+++TNL + ++ + +++
Sbjct: 190 EIVWDSSKPDGT------PRKLMNVDKMKKA-----GWQASTNLEDGIESSYNWFLE 235
>gi|448363311|ref|ZP_21551912.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
gi|445646510|gb|ELY99496.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
Length = 329
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E N S RP + G + +++ DR+ R + IPG G + A+V D++S L
Sbjct: 149 AERGVNAMSVRPCIVYGPHDYTARLDFWIDRVNRFDRILIPGDGTNIWHRAYVDDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKA 189
L E A+ +N+ R VT++ M L A A V+IVH P+ AA I+
Sbjct: 209 RLVAER--GAAGEAYNVGDRRLVTIEEMIDLIADALETTVDIVHAGPRELAAAEIELAD- 265
Query: 190 FPFRNMHFYAEPRAAKDILGWRST 213
+P + + A LGW ST
Sbjct: 266 YPLYREYPHVLSTAKLADLGWEST 289
>gi|395645323|ref|ZP_10433183.1| NAD-dependent epimerase/dehydratase [Methanofollis liminatans DSM
4140]
gi|395442063|gb|EJG06820.1| NAD-dependent epimerase/dehydratase [Methanofollis liminatans DSM
4140]
Length = 311
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 26/208 (12%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEG---DVVKPDAGHVQVEKYISENFS---NWAS 81
A+ GV++ + SSA +Y E P E D++ P A +++ + FS ++
Sbjct: 102 ARDCGVRKVVMASSAAVYGENPELPKREEMAPDLLSPYAAQKLSDEHYAAVFSRLYGLST 161
Query: 82 FRPQYMIGSGNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+Y G +D F RI+ P+ I G G Q + +VRD+
Sbjct: 162 VCLRYFNVFGPRQDPSSPYSGVISIFASRILNGDPIAIHGDGGQTRDFVYVRDVVQANLR 221
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 194
A+ + + +FN+ L+ +A+ QAAG V I + P+ I
Sbjct: 222 AMASD---AEGVFNIARGEQTDLNTLARSMMQAAGQEVAIRYGPPRGGDI---------- 268
Query: 195 MHFYAEPRAAKDILGWRSTTNLPEDLKE 222
H AE A+++LGWR + E L E
Sbjct: 269 RHSLAEISRAREVLGWRPEFTIQEGLAE 296
>gi|269926953|ref|YP_003323576.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC
BAA-798]
gi|269790613|gb|ACZ42754.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC
BAA-798]
Length = 305
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS------ 77
V++ A +GVKQFLF S+ +Y A V D + G + SE+
Sbjct: 96 VSEAAVRAGVKQFLFSSTFAVYGQA--SGLVTEDTPRAPIGMYGFLRTASEHLLLAAQKL 153
Query: 78 ---NWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
N FR + G G K DR++ +P+ I G+GMQ N HV D
Sbjct: 154 DGLNVLIFRQTNIYGKGITKKNTLLNVLADRVLNHQPITIYGTGMQARNFLHVMDTVQAY 213
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 168
LA+E ++ I+NL S +T+ +A + AA
Sbjct: 214 KLAIEKQ---ATGIYNLGSTETLTVKTVADIVNDAA 246
>gi|313127087|ref|YP_004037357.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|448288445|ref|ZP_21479644.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|312293452|gb|ADQ67912.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense
DSM 11551]
gi|445569596|gb|ELY24168.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense
DSM 11551]
Length = 330
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ R+ V +PG G + A+V+D++S L + E
Sbjct: 155 NAMSIRPCIVYGPDDYTERLDYWIHRVETYDRVVVPGDGTNVWHRAYVKDVASALRVVAE 214
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRN 194
S +N+ R VTL+ M + A AA VE+VH + AAG++ +R
Sbjct: 215 RGTPGES--YNVGDRRLVTLEEMVECIADAADTSVEVVHAGERELAAAGLEPDDFILYRE 272
Query: 195 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+ D LGW ST L E + ++Y RD
Sbjct: 273 YPHVLDTNKLAD-LGWDSTP-LDEAMAVSVDDYRDSDRD 309
>gi|448349556|ref|ZP_21538389.1| NAD-dependent epimerase/dehydratase [Natrialba taiwanensis DSM
12281]
gi|445639522|gb|ELY92627.1| NAD-dependent epimerase/dehydratase [Natrialba taiwanensis DSM
12281]
Length = 329
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 18/186 (9%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E N S RP + G + +++ DR+ R + +PG G + A+V D++S L
Sbjct: 149 AERGVNAMSVRPCIVYGPHDYTARLDFWIDRVNRFDRILVPGDGTNVWHRAYVDDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKA 189
L E A+ +N+ R VT++ M L A A V++VH P+ AA I+
Sbjct: 209 RLVAER--GAAGEAYNVGDRRLVTIEEMIDLIADALETTVDVVHAGPRELAAAEIELADY 266
Query: 190 FPFRNM-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV---KIG------RDKKAMQF 239
+R H + + A+ LGW ST L + + E+++ + G RD +A
Sbjct: 267 PLYREYPHILSTAKLAE--LGWESTP-LETAMDQSVEDHLASDRTGRENGPDRDAEARVL 323
Query: 240 EIDDKI 245
EI D +
Sbjct: 324 EILDTV 329
>gi|448712657|ref|ZP_21701776.1| NAD-dependent epimerase/dehydratase [Halobiforma nitratireducens
JCM 10879]
gi|445790364|gb|EMA41029.1| NAD-dependent epimerase/dehydratase [Halobiforma nitratireducens
JCM 10879]
Length = 362
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DR+ R V +PG G + +V D++S L L E
Sbjct: 174 NAMSLRPPIVYGPHDYTERLDFWIDRVNRFDRVIVPGDGTNIWHRVYVEDVASALRLVAE 233
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQ------------AAGLPVEIVHYDPK--AAG 183
E + +N R VTL+ M +L A+ AA +E+VH P+ AAG
Sbjct: 234 RGEPGEA--YNTGDRRLVTLEEMVELIAEQLARVGSGDEEPAADDGIELVHAGPRELAAG 291
Query: 184 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDD 243
+ +P H + LGW ST E + E++++ RD + + +D
Sbjct: 292 GIELEDYPLYRSHPHVMATNKLAALGWESTPP-AEAMARAVEDHLESDRDGRDQGPDRED 350
Query: 244 K-----ILESLK 250
+ +LE+L+
Sbjct: 351 EKRVLGVLETLQ 362
>gi|448299940|ref|ZP_21489946.1| NAD-dependent epimerase/dehydratase [Natronorubrum tibetense GA33]
gi|445586800|gb|ELY41073.1| NAD-dependent epimerase/dehydratase [Natronorubrum tibetense GA33]
Length = 329
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 23/201 (11%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-------------- 78
+ +++ISS Y ++E P EG+ Q E + N
Sbjct: 92 CEAYVYISSGAAYG-SEEIPKREGETALEACTSEQAVDEDGETYGNRKAEGDRAVVAAAD 150
Query: 79 ----WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
S RP + G + + +W+ DR+ R V +PG G + A+V D++S L
Sbjct: 151 EGVRAMSVRPCIVYGPHDYTERLDWWIDRVNRFDRVVVPGDGTNVWHRAYVEDVASALRT 210
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPF 192
E E + +N+ R VTL+ M +L A VE+V + AAG A + +
Sbjct: 211 VAE--EGTAGEAYNVGDRRLVTLEEMVELIAAELDADVEVVTAGARELAAGDIASEDYLI 268
Query: 193 RNMHFYAEPRAAKDILGWRST 213
+ + A LGW ST
Sbjct: 269 YREYPHVLSTAKLAALGWEST 289
>gi|448312943|ref|ZP_21502675.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
gi|445599789|gb|ELY53813.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
Length = 329
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+EN S RP + G + + +W+ DR+ R V +PG G + +V D++S L
Sbjct: 149 AENGVRAMSVRPPIVYGPHDYTERLDWWIDRVDRFDRVLVPGDGTNVRHRVYVEDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAF 190
+ E +A + +N+ R VTL M L A V++V P+ AG +
Sbjct: 209 RIVAERGDAGEA--YNVGDRRLVTLAEMVDLVADQLDAAVDVVTAGPRELEAGEIELDDY 266
Query: 191 PFRNMHFYAEPRAAKDILGWRST 213
P + + A LGW ST
Sbjct: 267 PLYRAYPHVLSTAKLAALGWEST 289
>gi|448469030|ref|ZP_21600039.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
gi|445809857|gb|EMA59893.1| NAD-dependent epimerase/dehydratase [Halorubrum kocurii JCM 14978]
Length = 330
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E N + RP + G + + +++ DR+ V +PG G + A+V D++S L
Sbjct: 150 AEEGVNAMAVRPCIVYGPYDYTERLDYWIDRVCAHDRVVVPGDGQNLWHRAYVEDVASAL 209
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKA 189
+ E EA + +N+ RA+TL+ + A AAG+ E+V A G++
Sbjct: 210 RIVAERGEAGRA--YNVGDRRALTLEETLETIADAAGVDCEVVTASADALAAGGLEPDDF 267
Query: 190 FPFRNMHFYAEPRAAKDILGWRST 213
+R + A D LGW ST
Sbjct: 268 VLYREYPHLLDTCALAD-LGWEST 290
>gi|187734545|ref|YP_001876657.1| NAD-dependent epimerase/dehydratase [Akkermansia muciniphila ATCC
BAA-835]
gi|187424597|gb|ACD03876.1| NAD-dependent epimerase/dehydratase [Akkermansia muciniphila ATCC
BAA-835]
Length = 308
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 32/223 (14%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--------GHVQVEKYISEN 75
V + A ++GVK+ + SSA IY P +E +P + G + + +E
Sbjct: 99 VLEEASAAGVKKIVLASSAAIYGDNPTVPKLETMYPEPKSPYAITKLDGEYYLNMFRAEG 158
Query: 76 FSNWASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
N A+ R + G G F ++ V+ + + G G Q + +V+D+
Sbjct: 159 KINTAAVRFFNVFGPRQDPKGAYAAAVPIFIEKAVKGEDITVYGDGSQTRDFIYVKDIVG 218
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
LT E+PE + +FN +T++ +A+ +AAG +++H P+ G D K +
Sbjct: 219 ALTFVAEHPEV--TGVFNAGYGGQITIEELAQNIIKAAGSSSKVLH-APERPG-DVKHS- 273
Query: 191 PFRNMHFYAEPRAAKDIL---GWRSTTNLPEDLKERFEEYVKI 230
RA D L GW+ LPE L E + I
Sbjct: 274 -----------RACADKLRNAGWQPRHTLPEGLATTLEYFKGI 305
>gi|448537773|ref|ZP_21622642.1| NAD-dependent epimerase/dehydratase [Halorubrum hochstenium ATCC
700873]
gi|445701733|gb|ELZ53706.1| NAD-dependent epimerase/dehydratase [Halorubrum hochstenium ATCC
700873]
Length = 330
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 24/221 (10%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-------------- 78
V +++ISS Y A+E P EG+ Q E + N
Sbjct: 93 VDGYVYISSGSSYA-AEEIPKREGETPLEPCTDEQATDDSHETYGNRKAEGDRAVFAAAE 151
Query: 79 ----WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ RP + G + + +++ DR++ + IPG G + A+V D++S L +
Sbjct: 152 EGVAAMAVRPCIVYGPHDYTERLDYWIDRVLTHDRLVIPGDGQNLWHRAYVEDVASALRI 211
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY--DPKAAGIDAKKAFPF 192
E E ++ +N+ RA+TL + A AAG+ E+V D AAG F
Sbjct: 212 VAERGEPGAA--YNVGDRRALTLRETVETIADAAGVEAEVVAASDDALAAGGLEPDDFTL 269
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+ + A LGW ST + E + EE+ + RD
Sbjct: 270 YREYPHLLDTCALADLGWESTP-IDESMARTVEEHRESDRD 309
>gi|112359369|gb|ABI15605.1| UDP-glucose 4-epimerase [Spironucleus barkhanus]
Length = 306
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 15/126 (11%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F DR +R P+ I G G Q + +V+DL + A + +S +FN+ + R+ +
Sbjct: 182 FIDRALRGIPITIFGDGEQTRDFVYVKDL---VCGAFALLDGGASGVFNIGTGRSTAVQR 238
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A++CA G EIVH +P+ I + P + + +GWR+ T +
Sbjct: 239 LAEICADLGG--SEIVHAEPRDGDIKYSLSCPEKIF----------ETVGWRAETEFLDG 286
Query: 220 LKERFE 225
LK ++
Sbjct: 287 LKATWQ 292
>gi|387792685|ref|YP_006257750.1| nucleoside-diphosphate-sugar epimerase [Solitalea canadensis DSM
3403]
gi|379655518|gb|AFD08574.1| nucleoside-diphosphate-sugar epimerase [Solitalea canadensis DSM
3403]
Length = 316
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYK-------PADEP-----PHVEGDVVKPDAG 64
N + + ++AK+ G+KQF+F SS+ +Y DEP P+ + G
Sbjct: 104 NVDATQNLLEFAKNQGIKQFIFASSSSVYGINPNTPWKEDEPLMPISPYASTKLSCEQLG 163
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIA 123
HV Y + + R + G D FF I+ + +P+ G G +
Sbjct: 164 HVYSHLYDIR----FLALRFFTVYGPAQRPDLAIHKFFKSILNEAAIPVFGDGNTSRDYT 219
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL----DGMAKLCAQAAGLPVEIVHYDP 179
++ D+ + +A + + ++ I NL + VTL + + K C + A I++ P
Sbjct: 220 YIDDILQGI-IACIDYDKSNYEIINLGNSDTVTLSHLIESIEKTCNKKA-----IINRMP 273
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
G D K F A+ A +LG+R TT L E LK+ +E Y
Sbjct: 274 MQPG-DVPKTF--------ADVGKAHRLLGYRPTTKLTEGLKKFYEWYT 313
>gi|111219998|ref|YP_710792.1| UDP-glucose 4-epimerase [Frankia alni ACN14a]
gi|111147530|emb|CAJ59183.1| putative UDP-glucose 4-epimerase [Frankia alni ACN14a]
Length = 309
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 101/241 (41%), Gaps = 39/241 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIY----KPADEPPHVE-GDVVKPDAGHVQVEKYISENFSN 78
V + A+ +GV + LF S+ +Y + AD P E ++ AGHV ++
Sbjct: 78 VCEAARQAGVARVLFASTVWVYGAVGERADPAPLTEDAEITLGRAGHVYTSTKLAAELL- 136
Query: 79 WASFRPQYMI-----------GSGNNKDCEEWFFDRIVRK----RPVPIPGSGMQFTNIA 123
S++ Y + G G +E R VRK + + G G QF N
Sbjct: 137 LHSYQQTYGLPFTILRYGIPYGPGMR---DELVLARFVRKALDGESLTVAGDGQQFRNYV 193
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK-LCAQAAGLPVEIVHYDPKAA 182
VRDL+ LA+ PEA ++ I L AV++ MA+ +C+ G +E V P
Sbjct: 194 FVRDLADAHVLAL-RPEAENATI-ALEGAEAVSVLEMAQAVCSHFPGTAIEHVPARPG-- 249
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEID 242
FR A+ A D+LGW+ TT + +++ E Y+ R +D
Sbjct: 250 --------DFRGREVSAQ--RALDLLGWQPTTPFTDGVRQYIEWYLANRRPPAQAVQPVD 299
Query: 243 D 243
D
Sbjct: 300 D 300
>gi|448501408|ref|ZP_21612198.1| NAD-dependent epimerase/dehydratase [Halorubrum coriense DSM 10284]
gi|445695200|gb|ELZ47310.1| NAD-dependent epimerase/dehydratase [Halorubrum coriense DSM 10284]
Length = 330
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-------------- 78
V +++ISS Y A+E P EG+ Q E + N
Sbjct: 93 VDGYVYISSGSSYA-AEEIPKREGETPLEPCTDEQAVDDSHETYGNRKAEGDRAVFAAAE 151
Query: 79 ----WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ RP + G + + +++ DR++ V +PG G + A+V D++S L +
Sbjct: 152 EGVAATAVRPCIVYGPHDYTERLDYWIDRVLTHDRVVVPGDGQNLWHRAYVEDVASALRI 211
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP 191
A E E ++ +N+ RA+TL + A AA + E+V AAG++
Sbjct: 212 AAERGEPGAA--YNVGDRRALTLRETLETIADAADVECEVVPASDDALAAAGLEPDDFVL 269
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+R + A D LGW ST + E ++ EE+ + RD
Sbjct: 270 YREYPHLLDTCALAD-LGWESTP-VDEAMERTVEEHRESDRD 309
>gi|77165006|ref|YP_343531.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
gi|76883320|gb|ABA58001.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC
19707]
Length = 320
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 20/218 (9%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNW 79
V + A +GV++ +F S+ G PP E + KP A + E Y ++
Sbjct: 102 VMNAAVEAGVERLIFASTGGALIGDATPPVDERSLPKPISPYGASKLCGEAYCHAFAKSY 161
Query: 80 ------ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
F Y S + K F +++ P+ I G G + HV DL S +
Sbjct: 162 HLETVCLRFGNVYGPHSAHKKGAVTTFIKALMKDEPIVIYGDGSASRDYIHVEDLGSGIA 221
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
A+E P S F+L S R T+ +A + Q AG P +H+ A++ R
Sbjct: 222 AALEVP-VEGSETFHLASGRETTVLELADILRQVAGKPHHPIHFKA------ARRGEVSR 274
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG 231
N Y + R A G++ L + L +E ++ G
Sbjct: 275 NFATYEKARCA---FGFKPKWRLEDGLAATWEWFISQG 309
>gi|116691199|gb|ABK15661.1| BssK [Azoarcus sp. CIB]
Length = 314
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 24/178 (13%)
Query: 33 VKQFLFISSAGIYK-----PADE-PPHVEGDVVKPDAGHVQ---VEKYISENFS------ 77
V+QFL IS+ +Y+ P DE P ++G +P+ G EK ++E+ +
Sbjct: 92 VRQFLLISTTTVYRNPSGGPLDENAPLLDGP--QPELGEYAGYGYEKCLAEDAARRECER 149
Query: 78 ---NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
RP + G N E +FFDR+ + P+ IP N V D++ +L
Sbjct: 150 LGIGLTVLRPAIIYGYYNYAPRETYFFDRLRNREPIVIPDPTRSSFNFIWVVDMARLLWR 209
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
+ P FNL S AVT + + G PVE + P G ++ P
Sbjct: 210 CIGEP-GVVGETFNLASGEAVTYSRIVEALGGIVGKPVETL---PLPVGEITRRNIPL 263
>gi|254433464|ref|ZP_05046972.1| NAD dependent epimerase/dehydratase family [Nitrosococcus oceani
AFC27]
gi|207089797|gb|EDZ67068.1| NAD dependent epimerase/dehydratase family [Nitrosococcus oceani
AFC27]
Length = 296
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 20/218 (9%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNW 79
V + A +GV++ +F S+ G PP E + KP A + E Y ++
Sbjct: 78 VMNAAVEAGVERLIFASTGGALIGDATPPVDERSLPKPISPYGASKLCGEAYCHAFAKSY 137
Query: 80 ------ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
F Y S + K F +++ P+ I G G + HV DL S +
Sbjct: 138 HLETVCLRFGNVYGPHSAHKKGAVTTFIKALMKDEPIVIYGDGSASRDYIHVEDLGSGIA 197
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
A+E P S F+L S R T+ +A + Q AG P +H+ A++ R
Sbjct: 198 AALEVP-VEGSETFHLASGRETTVLELADILRQVAGKPHHPIHFKA------ARRGEVSR 250
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG 231
N Y + R A G++ L + L +E ++ G
Sbjct: 251 NFATYEKARCA---FGFKPKWRLEDGLAATWEWFISQG 285
>gi|302342054|ref|YP_003806583.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM
2075]
gi|301638667|gb|ADK83989.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM
2075]
Length = 327
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 29/235 (12%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------- 74
R VA A+ GV++F++ S+ G++ + PP E + A + Q KY E
Sbjct: 95 RLVAQAAQDEGVRKFIYCSTCGVHGNVERPPADENAPINA-ADYYQQTKYNGEVALRPFI 153
Query: 75 -NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
RP + G G+ + W V+K P+ GSG + ++ +L
Sbjct: 154 DAGMKATILRPAAIYGPGDPE--RFWMIYSRVQKGVFPMFGSGKTLYHPLYIDNLIDAFL 211
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD----PKAAGIDAKKA 189
LA E + + + ++ ++ + A+A G PV I H+ A + K
Sbjct: 212 LAQEE-DKGLGQAYLIADEQYYPIEELVTRVAKAMGKPVRIPHFPVWPVVAAGHVCEKLC 270
Query: 190 FPF--------RNMHFYAEPRA-----AKDILGWRSTTNLPEDLKERFEEYVKIG 231
PF R + +Y + RA AK LG++ + E L++ +E YV+ G
Sbjct: 271 KPFGVAPPIFPRRVDWYRQNRAFDIGKAKRELGYQPKVGIDEGLRKTYEWYVREG 325
>gi|444917387|ref|ZP_21237488.1| UDP-glucose 4-epimerase [Cystobacter fuscus DSM 2262]
gi|444711141|gb|ELW52094.1| UDP-glucose 4-epimerase [Cystobacter fuscus DSM 2262]
Length = 308
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 26/209 (12%)
Query: 26 DWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENF 76
+ ++ +GV++ +F S+ G IY D P E +P AG + + Y ++
Sbjct: 101 EASRVAGVQKVVFSSTGGAIYGEQDVFPAPESHATRPISPYGVSKAAGELYLNYYKAQYG 160
Query: 77 SNWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+ + R + G N E F R++ + I G G Q + +V D++
Sbjct: 161 LKYVALRYANVYGPRQNPHGEAGVVSIFSTRLLAGQDCTIYGEGKQTRDFVYVEDVARAN 220
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
LA E + NI V ++ + L AQAAG PKAAG + P
Sbjct: 221 LLAAEKDYSGPINIGTGVE---TDINRLFSLLAQAAG--------SPKAAGHAPGR--PG 267
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLK 221
M + R A+++LGW+ T +L E +
Sbjct: 268 EQMRSCVDNRLAREVLGWQPTVDLAEGTR 296
>gi|322369860|ref|ZP_08044422.1| 3-beta hydroxysteroid dehydrogenase/isomerase family superfamily
protein [Haladaptatus paucihalophilus DX253]
gi|320550196|gb|EFW91848.1| 3-beta hydroxysteroid dehydrogenase/isomerase family superfamily
protein [Haladaptatus paucihalophilus DX253]
Length = 329
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E N S RP + G + + +++ DR+ + + +PG G + A+ D++S L
Sbjct: 149 AERGVNAMSVRPCIVYGPYDYTERLDFWIDRVNERDRLVVPGDGQNVWHRAYAEDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKA 189
+ E E +N+ +R VT+D M L A A VE+VH + A +
Sbjct: 209 RIVAE--EGDPGEAYNVGDERLVTMDEMLSLIADALDTDVELVHASDRELSTADLSTDDY 266
Query: 190 FPFRNM-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+R+ H + A LGW ST L ++ EE+++ RD
Sbjct: 267 ILYRDYPHVLDTNKLAA--LGWESTP-LDVAMERTVEEHLESDRD 308
>gi|359417148|ref|ZP_09209355.1| NAD-dependent epimerase/dehydratase [Candidatus Haloredivivus sp.
G17]
gi|358032473|gb|EHK01171.1| NAD-dependent epimerase/dehydratase [Candidatus Haloredivivus sp.
G17]
Length = 317
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 33 VKQFLFISSAGIYK--PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP------ 84
+ +F+F SS+ +Y P DE P E + P A + Q +K+ E ++
Sbjct: 120 IGKFMFASSSSVYGMVPEDELPVQEDRELSPIAPYPQSKKHGEEMVRLYSELYDFDYSIL 179
Query: 85 QYMIGSGNNKDCEEWF---FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
+Y G + +E F ++ PV I G G Q + +V+D++S A++ E
Sbjct: 180 RYFTVYGPRQRPDEAFTKFIQMVLNDEPVTIYGDGEQSRDFTYVKDIASG---AIKASEK 236
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
S+ +N+ S R +T++ M + + VE H + DA+ H +A+P
Sbjct: 237 QGSDTYNIASGRRITVNEMVETLDEVMEENVEKTHVEQPEG--DAR--------HTHADP 286
Query: 202 RAAKDILGWRSTTNLPEDLKE 222
AK L + + + E +KE
Sbjct: 287 TKAKKELDFEAEKDFEEAVKE 307
>gi|406935036|gb|EKD69122.1| Nucleoside-diphosphate-sugar epimerase [uncultured bacterium]
Length = 339
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 28 AKSSGVKQFLFISSAGIYK-----PADEPPHVEGDVVKPDAGH--VQVEK---YISENFS 77
A S + Q++FIS+ +Y PA E ++ G ++ EK Y ++N
Sbjct: 96 AFSKKISQYIFISTCSVYGVLKYLPASEEHPLDTGESNSMYGREKIKCEKELLYSAKNKD 155
Query: 78 -NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTLA 135
N RP Y+ G + + +F DRI ++ P+ P G N +V+DL+ +
Sbjct: 156 FNVTILRPTYIYGPWDYTERLFYFIDRIYKQVPIFFPSGGQDPMFNAIYVKDLARQIAGL 215
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH--YD--PKAAGIDAKKAFP 191
+ N E A + I+N S+ ++ KL + V++VH YD KAAG +FP
Sbjct: 216 LLN-EGAYNQIYNAASNDSLYFSEFLKLIGNSLSQEVKLVHVSYDEYKKAAG---GLSFP 271
Query: 192 FRNMHFYAEPRAAKDILG 209
+ H + K + G
Sbjct: 272 YTRYHTAFDAGKMKALFG 289
>gi|406919667|gb|EKD57900.1| hypothetical protein ACD_57C00108G0002 [uncultured bacterium]
Length = 304
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 91/225 (40%), Gaps = 25/225 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEK 70
+NN + + + G ++ +F SSA +Y D+ P E V PD A +E
Sbjct: 89 DNNVLGAVNLLECMRDVGCRKIIFSSSACVYGTPDKLPIKEDAAVHPDNPYGATKAAIEV 148
Query: 71 YIS--ENFSNWASFRPQYMIGSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNI 122
Y+ N+ + +Y G K + F + K+P+P+ G Q +
Sbjct: 149 YLQTYHQIFNFDTIILRYFNPYGPGKMGKPITHAIPNFIKATLAKKPIPLYWKGEQIRDF 208
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
++ DL+ ++ + + NIFN+ +++ + + + + + G V I +
Sbjct: 209 IYIDDLARA---HIDVLKLSGFNIFNIGTEKGIKVKDIVEEIFKIVGFRVPIADLGKRPG 265
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
+ A YA K +GW++ +LPE LK E Y
Sbjct: 266 DVPAN----------YASSAKLKKAVGWKAKVSLPEGLKRTIEYY 300
>gi|148272880|ref|YP_001222441.1| putative nucleoside-diphosphate-sugar epimerase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147830810|emb|CAN01751.1| putative nucleoside-diphosphate-sugar epimerase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 321
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 18/181 (9%)
Query: 67 QVEKY-ISENFSN---WASFRPQYMIGSG-------NNKDCEEWFFDRIVRKRPVPIPGS 115
++E+Y I+E+ S P ++ G G N D W + P+ +PGS
Sbjct: 135 EIERYLIAESRSGGVPCTVVHPGHISGGGWPVITPVGNLDPAVWTA--LATGGPLAVPGS 192
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G + + H D++ ++ LA+ N E + F+ VSDRA+++ G A+ A G E+
Sbjct: 193 GSETMHHVHADDVAQVVQLAIANRETSVGESFHAVSDRALSVRGFARAAAAWFGREPELE 252
Query: 176 HYD-----PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
H D + A ++ + A A+D+LG+ E +E E V+
Sbjct: 253 HLDWDGFRARTEPDHADASWEHLSRSHVASIDKARDVLGYSPRFTSEEAAREAVEWMVRA 312
Query: 231 G 231
G
Sbjct: 313 G 313
>gi|343083404|ref|YP_004772699.1| NAD-dependent epimerase/dehydratase [Cyclobacterium marinum DSM
745]
gi|342351938|gb|AEL24468.1| NAD-dependent epimerase/dehydratase [Cyclobacterium marinum DSM
745]
Length = 317
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 49/250 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY----- 71
N +Q + +++ GV++F+F+ S+ IY P P ++ D + + E Y
Sbjct: 85 NMLIQNNLINYSHQFGVEKFIFLGSSCIY-PKLAPQPLKEDSLLTSSLEPTNEWYALAKI 143
Query: 72 --------ISENFS-NWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
I + F ++ S P + G +N D E ++RK PV +
Sbjct: 144 TGVKACDAIRKQFGKDFISLMPTNLYGPYDNFDLETSHVLPAMIRKFHEAKENGNSPVTL 203
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
GSG HV D++ + AVEN + N++N+ + + +T+ +A+L + G
Sbjct: 204 WGSGSPMREFLHVNDMADAVVFAVEN--SFKDNLYNVGTGKDLTIKSLAELIQKITGHTG 261
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
EI K G PR D+ GW++ L E +KE +E +
Sbjct: 262 EIEWDSEKPDGT----------------PRKLMDVSKMSDAGWQAKIGLEEGVKETYEWF 305
Query: 228 V-KIGRDKKA 236
+ IG+ K+
Sbjct: 306 LNNIGQYKQV 315
>gi|86738942|ref|YP_479342.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3]
gi|86565804|gb|ABD09613.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3]
Length = 327
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 41/227 (18%)
Query: 24 VADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPDAGHVQVEKYISENFSN 78
+ + A+ GV++ LF S+ +Y + P + ++ AGHV ++
Sbjct: 96 ICEAARQVGVRRVLFASTVWVYGAVGDRAGSAPLTEDAEITLGRAGHVYTSTKLAAELL- 154
Query: 79 WASFRPQYMI-----------GSGNNKDCEEWFFDRIVRK----RPVPIPGSGMQFTNIA 123
S++ Y + G G +E R VRK + + G G+QF N
Sbjct: 155 LHSYQQTYGLPFTILRYGIPYGPGMR---DELVLARFVRKALNGESLTVAGDGLQFRNYV 211
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 183
VRDL+ LA+ P+AA++ + L +V++ MA+ + Y P A
Sbjct: 212 FVRDLAEAHVLAL-TPDAANTTL-ALEGSESVSVLEMARAVQE----------YFPGTA- 258
Query: 184 IDAKKAFP--FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
I+ A P FR A+ RAA ++LGWR TT E +++ E Y+
Sbjct: 259 IEHMPARPGDFRGREISAQ-RAA-EVLGWRPTTPFSEGVRQYIEWYL 303
>gi|392943991|ref|ZP_10309633.1| methyltransferase, FkbM family [Frankia sp. QA3]
gi|392287285|gb|EIV93309.1| methyltransferase, FkbM family [Frankia sp. QA3]
Length = 599
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPP-HVEGDVVKPDAGHVQVEKYISENFSNWASF 82
+ A+++G+++ +F+S+ GI+ D P HV + E I + +W
Sbjct: 84 IVSAAEAAGIRRAVFLSTTGIFTSLDPPSKHVR----------IAAEHTIETSGLDWTII 133
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
RP + G ++++ +VR+ PV P+PG G + HV DL++ + A+ + +A
Sbjct: 134 RPTMIYGGPDDRNMARLLA--LVRRVPVLPLPGGGRRVHQPVHVDDLAATVLRAL-SADA 190
Query: 142 ASSNIFNLVSDRAVTL 157
A +++ RA+ L
Sbjct: 191 AVGRGYDVAGPRALPL 206
>gi|406947731|gb|EKD78610.1| nad-dependent epimerase/dehydratase [uncultured bacterium]
Length = 316
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 23/229 (10%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV----VKPDA-GHVQVEKY 71
N+ + D A G++QF+F S++ +Y P E V + P A ++ E+Y
Sbjct: 101 NYGGTAQLVDIATQHGIEQFIFGSTSAVYGNTASLPFTEEIVNLSPISPYAISKLKAERY 160
Query: 72 ISENFSN----WASFRPQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQFTNIAHVR 126
+ E+ R + G D + F + I+ ++P+ G G + ++
Sbjct: 161 LQEHHVRTDLPLTILRFFTVYGERGRPDMAPYLFTEAILHQQPIKKFGDGSTSRDYTYIA 220
Query: 127 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA 186
D+ + + AV+ P I NL + +AVTL+ QA G K A I+
Sbjct: 221 DIIAGIVAAVQQP--FDFEIINLGNSKAVTLNEFISTLEQATG----------KTAVIEQ 268
Query: 187 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 235
A H A+ A+ +LG++ TT+L L++ YV RD +
Sbjct: 269 LPAQSGDVNHTLADVSKAQRLLGYQPTTSLETGLRKFVGWYVAT-RDSR 316
>gi|15895601|ref|NP_348950.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum ATCC 824]
gi|337737550|ref|YP_004636997.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum DSM 1731]
gi|384459060|ref|YP_005671480.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum EA 2018]
gi|15025343|gb|AAK80290.1|AE007734_4 UDP-glucose 4-epimerase [Clostridium acetobutylicum ATCC 824]
gi|325509749|gb|ADZ21385.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum EA 2018]
gi|336293218|gb|AEI34352.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum DSM 1731]
Length = 301
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 78 NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
N+ R + G G + E F +++ + P+ I G+G Q + +V+D++
Sbjct: 161 NYTVLRYSNVYGPGQDSSGEGGVVSIFAEKLTKGEPLCIYGNGNQIRDFVYVKDVTEANI 220
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
LA+ + ++I+N+ ++ T++ +AKL +A G VEI+H +A I F
Sbjct: 221 LALN---SLDNDIYNVSTNTKTTINDLAKLMCEAYGKEVEIMHKGERAGDI-------FE 270
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
+ Y + A GW+ +L +KE + +
Sbjct: 271 SYMSYDKIYNA---CGWKPKYDLKLGIKETIQSF 301
>gi|88604312|ref|YP_504490.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei
JF-1]
gi|88189774|gb|ABD42771.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei
JF-1]
Length = 343
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 33/234 (14%)
Query: 6 AKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--- 62
+ F F NN + + A G K F+F SS +Y A EPP E P+
Sbjct: 90 SHFIRRFNYTNNLIGSINLINEAVKVGTKCFVFTSSIAVYG-AIEPPMTEEKTPHPEDPY 148
Query: 63 -AGHVQVEKYISENFS----NWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPI 112
+ VE + S N+ FRP + G N ++ F +I +P+ I
Sbjct: 149 GISKLAVELDLMAAHSMFGLNYVIFRPHNVYGEYQNLSDPYRNVIGIFMKQIFEGQPMTI 208
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPE--AASSNIFNLVSDRAVTLDGMAKLCAQAAGL 170
G G Q ++V D+ + L V++P A +N+FN+ +D+ T++ +A A A G
Sbjct: 209 FGDGEQQRAFSYVGDI---IPLIVQSPTIPGALNNVFNVGADKPYTVNELASKVAIALGK 265
Query: 171 PVE-IVHYDPK-AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
P VH P+ GI Y++ AK + G T+L + L++
Sbjct: 266 PDHPTVHLPPRNEVGIA------------YSDHSKAKSVFGDSPHTSLDDGLEK 307
>gi|427817423|ref|ZP_18984486.1| putative UDP-glucose 4-epimerase [Bordetella bronchiseptica D445]
gi|410568423|emb|CCN16461.1| putative UDP-glucose 4-epimerase [Bordetella bronchiseptica D445]
Length = 307
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 3 FNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD 62
F+ A+ A+ +TN R+ V D+ G + ++ SS+ +Y D E ++
Sbjct: 80 FDSAEAVAIAQTNR--RIDSTVIDFCHEIGAR-LVYCSSSSVYGRLDSTEVAESRALERA 136
Query: 63 AGHVQ----VEKYISENFSNWASFRPQYMIGSGN-NKDCEEWFFDRIVRKRPVPIPGSGM 117
G+V E+ I++ ++A+ R G G + F +R ++ P+ G+G
Sbjct: 137 TGYVAEKIWAEEEIAKRLPSYATLRLCAPYGPGQKTRTVLRIFIERALQGAPILYFGTGS 196
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 166
+ + HVRD+++ + A++ P + +FN+ R +T+ + L ++
Sbjct: 197 REQDFVHVRDIAAAIVAALDRPTV--NGVFNISGGRPITMRELGMLVSR 243
>gi|406944084|gb|EKD75936.1| hypothetical protein ACD_43C00272G0006 [uncultured bacterium]
Length = 309
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 99/240 (41%), Gaps = 46/240 (19%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
NN ++Q + A ++ VK+ LF+ S+ IY +P E + G++ +
Sbjct: 84 NNLQIQNNIIFSAHATAVKKLLFLGSSCIYPKLCPQPIKEEYLLTGELEPTNEPYAIAKI 143
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG + Y + +N+ S P + G G+N D ++RK V +
Sbjct: 144 AGIKMCQAYNEQYGTNFISVMPTNLYGPGDNFDLHNSHVLPALIRKFYEAKQTGAPSVTV 203
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G + +V DL+ + ++N + S I N+ + + ++ +A+L QA G
Sbjct: 204 WGTGKPRRELLYVEDLADAVVHVMQNHDG--SQIINIGTGQDHSIAEIAQLVQQAVGYTG 261
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
EIV+ K G P+ D+ LGW + T L +++ + Y
Sbjct: 262 EIVYDTSKPDG----------------TPQKLLDVSRLTALGWTAHTTLKHGIEQTLDWY 305
>gi|163792518|ref|ZP_02186495.1| nucleotide sugar epimerase [alpha proteobacterium BAL199]
gi|159182223|gb|EDP66732.1| nucleotide sugar epimerase [alpha proteobacterium BAL199]
Length = 328
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 30 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-NWASF------ 82
S G+K F++ SS+ +Y E P D V K +E S ++AS
Sbjct: 120 SRGLKHFVYASSSSVYGANREIPFSVDDRVDRPMSFYGATKRANEAMSYSYASLYGIPTT 179
Query: 83 --RPQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
R + G D W F DRI+ RP+ + G + ++ D+ + + A+++P
Sbjct: 180 GLRFFTVYGPWGRPDMSPWLFTDRILNGRPIEVFNHGQMRRDFTYIDDIVAGVVAALDHP 239
Query: 140 EAASSN-----IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 194
A S+ +NL ++ V L K+ A G P E++ K P
Sbjct: 240 PAGSAESPPIATYNLGNNSPVALLDYIKVIEAACGKPAELI----------MKPMQPGDV 289
Query: 195 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+ YA+ A++ LG++ TT L E RF ++ K
Sbjct: 290 LETYADIEASRRDLGYQPTT-LIEVGIPRFVDWFK 323
>gi|432330822|ref|YP_007248965.1| nucleoside-diphosphate-sugar epimerase [Methanoregula formicicum
SMSP]
gi|432137531|gb|AGB02458.1| nucleoside-diphosphate-sugar epimerase [Methanoregula formicicum
SMSP]
Length = 313
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 30/213 (14%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS------ 81
A+ GVK+ +F SSA +Y E P E + P + + V K EN+ + S
Sbjct: 107 ARDCGVKKVVFASSAAVYGDKPELPKRESMMPDPLSPY-AVTKSAGENYCSVFSRLYGMQ 165
Query: 82 ---------FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
F P+ GS + ++ + + K PV I G G Q + +V+D+
Sbjct: 166 CVSLRYFNVFGPRQDPGSPYSGVITKFITNTLAHK-PVTIFGDGKQTRDFVYVKDVVRAN 224
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
LA+E+P S ++N+ S + L + ++ A +G+ V + P A +
Sbjct: 225 ILAMESP---VSGVYNVASGSQLDLMELLEIVANVSGIRVPVEFVQPAAGDV-------- 273
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
H A+ A++ILG+ ++ E L E +
Sbjct: 274 --RHSVADIAVAQEILGYVPGCSMREGLGETVQ 304
>gi|406965661|gb|EKD91272.1| hypothetical protein ACD_30C00029G0001 [uncultured bacterium]
Length = 262
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG---DVVKP-DAGHVQVEKY 71
NN + + K GVK+ +F SSA +Y P EG D P A + VE++
Sbjct: 46 NNIMGSINLLEAMKEKGVKRIIFSSSATVYGEPKTLPLTEGMPLDSANPYAASKIAVEQF 105
Query: 72 ISENFSNWA-------SFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFT 120
+S N F P G G + E F + K+PVP+ G Q
Sbjct: 106 LSAYHKNHGFDVTILRYFNP---YGPGEEHEPETHAIPNFIKNGLDKKPVPLYWKGEQTR 162
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
+ ++ DL+ T+ ++ + NIFN+ +++ V + + + G +E+ +
Sbjct: 163 DFIYIEDLAKAHTVVLDQ---SGFNIFNVGTEQGVRIIDVINKLSDILGYTLEVEDLGDR 219
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
+ + YA + K+ GW + T+L E L++ E
Sbjct: 220 PGDVRSN----------YASSQKLKESTGWSAQTDLNEGLRKTVE 254
>gi|149918317|ref|ZP_01906808.1| GalE2 [Plesiocystis pacifica SIR-1]
gi|149820843|gb|EDM80252.1| GalE2 [Plesiocystis pacifica SIR-1]
Length = 324
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 33 VKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYISENFSN-------W 79
V+ LF SS+ IY EP + E D P + + V EK ++ ++ +
Sbjct: 105 VEHLLFTSSSEIYGDG-EPGRIFREQDEPAPRSAYGRSKVAGEKLMAAAAASPEGARLSY 163
Query: 80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI-PGSGMQFTNIAHVRDLSSMLTLAVEN 138
+FR G G D F R + P+ G G+Q + D+++ + A+E
Sbjct: 164 TAFRLFNAYGPGQRADFVVPAFCRAALQGEAPVVHGDGLQTRTFTFIEDIAAAMVAALER 223
Query: 139 PE----AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 194
A S +FNLVS+ +T+ +A+L +AG +++H D + + K F
Sbjct: 224 RAPARAAGSFEVFNLVSEETLTIASLAQLVCLSAGEQPQVIHRDHEDPSVGRSKRFEVSR 283
Query: 195 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 226
A+ A++ LG+R T L E ++ ++
Sbjct: 284 R--VADNGKAREALGFRPATPLSEGVRRTLDD 313
>gi|336179997|ref|YP_004585372.1| dTDP-glucose 4,6-dehydratase [Frankia symbiont of Datisca
glomerata]
gi|334860977|gb|AEH11451.1| dTDP-glucose 4,6-dehydratase [Frankia symbiont of Datisca
glomerata]
Length = 331
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPA----DEPPHVEGDV--VKPDAGHVQVEKYISENFS 77
V + A+ +GV++ LF S+ +Y A D+P + DV AGHV I+
Sbjct: 94 VCEAARVAGVRRVLFASTVWVYGAAGGDPDDPHPLTEDVEFALVRAGHVYTSTKIAAELL 153
Query: 78 NWASFRPQYMI-----------GSGNNKDCEEWFFDRIVRK----RPVPIPGSGMQFTNI 122
S++ Y + G G +E R +RK P+ I G G QF N
Sbjct: 154 -LHSYQQTYGVDFTILRYGIPYGPGMR---DELVLARFLRKALDGEPLTIAGDGQQFRNY 209
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA-QAAGLPVEIVHYDPKA 181
VRDL+ LA+ ++A + L D V++ MA+ G+ +E V
Sbjct: 210 VFVRDLADAHVLALA--DSARNATIALEGDERVSVLAMAQAVRDHVPGVRIEHV------ 261
Query: 182 AGIDAKKAFPFRNMHFYAEP---RAAKDILGWRSTTNLPEDLKERFEEYV 228
P R F P AA+ +LGW TT E +++ E Y+
Sbjct: 262 ---------PARPGDFRGRPVSNAAAEALLGWHPTTRFAEGVRQYVEWYL 302
>gi|262195081|ref|YP_003266290.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM
14365]
gi|262078428|gb|ACY14397.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM
14365]
Length = 331
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 35/229 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 76
N+ V ++A+ GV + + SSA +Y +E P E +P + + K SE
Sbjct: 109 NYAGTAQVLEYARHRGVAKVVLASSAAVYGDTEELPVRETLPTRPLSPY-GANKLGSEQL 167
Query: 77 SNWASFRPQYMIGS---------GNNKDCEE-------WFFDRIVRKRPVPIPGSGMQFT 120
+ + + +G+ G +D + F DR + +P+ I G G Q
Sbjct: 168 LYY--YSAVHGVGTTALRFFNVYGPRQDPKSPYSGVISIFADRAMAGKPLTIFGDGEQTR 225
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK----LCAQAAGLP-VEIV 175
+ +V D+S + A E + I N+ + T++ +A+ LC +AAG P V I
Sbjct: 226 DFVYVGDVSRAVAQACLGDEGDRA-IINIGTGSETTVNELARTIVSLCGEAAGAPEVAIS 284
Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
H D + I A+ M +DILG R+ T L L+E
Sbjct: 285 HSDARPGEI-ARSVAAVERM---------RDILGLRAETELAAGLRETL 323
>gi|99081322|ref|YP_613476.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040]
gi|99037602|gb|ABF64214.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040]
Length = 319
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 36/236 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
N +++ +A+ A ++ V++FLF+ S+ IY K A +P P E V
Sbjct: 89 QNLQIETNLAEAAHAADVQRFLFLGSSCIYPKFAPQPIPEASLLTGALEPSNEWYAVAKI 148
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE----------EWFFDRIVRKRPVPI 112
AG ++ Y + +W S P + G G+N D E ++ R+ V +
Sbjct: 149 AGIKLMQAYRQQYGRDWISAMPTNLYGPGDNYDLETSHVLPALLHKFHTARLTGADQVTL 208
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
GSG H DL+ L +++ A N+ S + +++ +A+L A+ G+
Sbjct: 209 WGSGTPLREFLHCDDLADALVFLLKHYSGADH--VNVGSGKEISIRALAELIAEIVGVSP 266
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
E+V K G K R A +GW L + + E + +V
Sbjct: 267 ELVFDSSKPDGTPRK---------LMDSARLAA--MGWSGARPLRDGIAETYAAFV 311
>gi|223984220|ref|ZP_03634368.1| hypothetical protein HOLDEFILI_01661 [Holdemania filiformis DSM
12042]
gi|223963835|gb|EEF68199.1| hypothetical protein HOLDEFILI_01661 [Holdemania filiformis DSM
12042]
Length = 261
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 20/201 (9%)
Query: 8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIY------------KPADEPPHVE 55
F A+ + + Q + + VK ++FISS+ +Y +P E P+
Sbjct: 10 FDAVIDVSGLNQKQIEICCESLDCSVKHWIFISSSAVYDVDRCALPILETEPLGENPYWG 69
Query: 56 GDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 115
A + + ++ + RP YM G N E + FD ++ +P+ IP +
Sbjct: 70 QYGTDKIAAESALTAFCQKHNIALSILRPPYMYGEYNYVQRESFIFDHLMHNQPILIPAA 129
Query: 116 G--MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
+QF + DL+ ++T + P+ ++N+ + V+ + CA G +
Sbjct: 130 DNRIQF---CYTGDLAKIVTTLLACPKQGIE-VYNVGDQQGVSFSEWIQQCADVCGTQAK 185
Query: 174 IVHYDPKAAGIDAKKAFPFRN 194
I+ A AK FPFR+
Sbjct: 186 II--PVHDANWKAKDYFPFRD 204
>gi|119493460|ref|ZP_01624129.1| oxidoreductase [Lyngbya sp. PCC 8106]
gi|119452704|gb|EAW33883.1| oxidoreductase [Lyngbya sp. PCC 8106]
Length = 343
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 29 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFS-----NW 79
K K+F+ +S+ G++ ++PP E +KP V+ E +I +F+ ++
Sbjct: 113 KEPNFKRFVHVSTIGVHGHIEQPPADETYRMKPGDIYQETKVEAELWI-RDFAPKAGLSF 171
Query: 80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
A RP + G G+ + + + ++V K+ VP+ G G + HV DL++ + A +P
Sbjct: 172 AVVRPAGIYGPGDKRLLKIF---QMVNKKWVPVIGDGSNLYHFIHVDDLTNFMICAATHP 228
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF------- 192
+ A + +F S A+T + M + G+ + + P A F
Sbjct: 229 K-AEAEVFICGSPEAMTFEKMISIIGDVYGVKAQFLRL-PAAPLFALGYVFEILCKPLGI 286
Query: 193 ------RNMHFYAEPRA-----AKDILGWRSTTNLPEDLKERFEEY 227
R + FY + R+ ++ILG+ +T + + +KE + Y
Sbjct: 287 QPPIYRRRVAFYTKDRSFNTSKMRNILGFNTTHSDLDGIKETAQWY 332
>gi|340355317|ref|ZP_08678005.1| GDP-L-fucose synthase [Sporosarcina newyorkensis 2681]
gi|339622514|gb|EGQ27033.1| GDP-L-fucose synthase [Sporosarcina newyorkensis 2681]
Length = 314
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 45/243 (18%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N +Q V D A+ GVK+ LF+ S IY +P E + GD+ +
Sbjct: 83 DNLMIQSNVIDAARRYGVKKLLFLGSTCIYPKFAPQPLKESYLLTGDLEPTNEPYALAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKR---------PVPI 112
AG Y ++ +N+ S P + G +N D E ++RK + I
Sbjct: 143 AGIKLCTAYNNQYGTNFMSVMPTNLYGPNDNFDLETSHVLPSLMRKIHEAKVQDEPTITI 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF-NLVSDRAVTLDGMAKLCAQAAGLP 171
G+G + HV DL++ +E A F N+ + +T+ +A+ + G
Sbjct: 203 LGTGSPLRDFLHVDDLAAACVYLMERYAAEEIGEFVNIGTGNEITIKALAEKLCEVIGYE 262
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEE 226
++V K G PR D+ LGW + E L++ +
Sbjct: 263 GQLVFDSTKPDGT----------------PRKLTDVSKLTSLGWSYGISFEEGLQDTYAW 306
Query: 227 YVK 229
Y++
Sbjct: 307 YIQ 309
>gi|448419875|ref|ZP_21580719.1| nucleoside-diphosphate-sugar epimerase [Halosarcina pallida JCM
14848]
gi|445674789|gb|ELZ27326.1| nucleoside-diphosphate-sugar epimerase [Halosarcina pallida JCM
14848]
Length = 330
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 26/224 (11%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHVEGDV----VKPD-AGHVQVEKY-------------I 72
S V +++ISS Y +E P EG+ PD A E Y
Sbjct: 91 SDVDAYVYISSGAAYG-REEIPKREGETPLCECTPDQAADDSDETYGPRKAEGDRIVFEA 149
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+ N S RP + G + + +++ +R+ + +PG G + A+V D++S L
Sbjct: 150 ATEGVNAMSVRPCIVYGPHDYTERLDYWINRVEEYDRLVVPGDGTNLWHRAYVGDVASAL 209
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKA 189
+ E +N+ R TL+ L A+AA V++VH + AAG+ +++
Sbjct: 210 RIVAER--GTPGEAYNVGDRRLATLEETVDLIAEAAEESVDVVHAGERELAAAGLASEEF 267
Query: 190 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+R+ + D LGW ST L E + +E+ K RD
Sbjct: 268 VLYRDYPHVMDTNELAD-LGWESTP-LDEAMAATVDEHRKSDRD 309
>gi|111221487|ref|YP_712281.1| hypothetical protein FRAAL2051 [Frankia alni ACN14a]
gi|111149019|emb|CAJ60700.1| hypothetical protein; putative SAM domain [Frankia alni ACN14a]
Length = 595
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 29 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 88
+++G+++ +F+S+ GI+ D P + E I + W RP +
Sbjct: 89 RAAGIRRAVFLSTTGIFTALDPPSKRV---------RIAAEHTIETSGLEWTIIRPTMIY 139
Query: 89 GSGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 147
G ++++ +VR+ PV P+PG G + HV DL++ + A+ + +AA +
Sbjct: 140 GGSDDRNMARLLA--LVRRVPVLPLPGGGRRLHQPVHVDDLAATVLRAL-SADAAVGRGY 196
Query: 148 NLVSDRAVTL 157
++ RA++L
Sbjct: 197 DVAGPRALSL 206
>gi|170782054|ref|YP_001710386.1| oxidoreductase [Clavibacter michiganensis subsp. sepedonicus]
gi|169156622|emb|CAQ01774.1| putative oxidoreductase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 321
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Query: 109 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 168
P+ +PGSG + + H D++ ++ LA+ N E + F+ VSDRA+++ G A+ A
Sbjct: 186 PLAVPGSGSETMHHVHADDVAQVVQLAIANRETSVGESFHAVSDRALSVRGFARAAAAWF 245
Query: 169 GLPVEIVHYD-----PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 223
G E+ H D + A ++ + A A+D+LG+ E +E
Sbjct: 246 GREPELEHLDWDGFRARTEPDHADASWQHLSRSHVASIDKARDVLGYVPRYTSEEAAREA 305
Query: 224 FEEYVKIG 231
E V+ G
Sbjct: 306 VEWMVRAG 313
>gi|448446377|ref|ZP_21590696.1| NAD-dependent epimerase/dehydratase [Halorubrum saccharovorum DSM
1137]
gi|445684132|gb|ELZ36517.1| NAD-dependent epimerase/dehydratase [Halorubrum saccharovorum DSM
1137]
Length = 333
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
+ RP + G + + +++ DR++ V +PG G + A+V D++S L + E E
Sbjct: 161 AVRPCIVYGPYDYTERLDYWIDRVLSHDRVVVPGDGQNLWHRAYVEDVASALRIVAERGE 220
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHF 197
A + +N+ RA+TL+ + A AAG E+V A G++ +R
Sbjct: 221 AGRA--YNVGDRRALTLEETLEAIADAAGADCELVTASADALAAGGLEPDDFVLYREYPH 278
Query: 198 YAEPRAAKDILGWRST 213
+ A D LGW ST
Sbjct: 279 LLDTCALAD-LGWEST 293
>gi|443624519|ref|ZP_21108989.1| putative NDP-glucose 4-epimerase [Streptomyces viridochromogenes
Tue57]
gi|443341964|gb|ELS56136.1| putative NDP-glucose 4-epimerase [Streptomyces viridochromogenes
Tue57]
Length = 342
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 23/227 (10%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA---GHVQVEKYISENFSN----WA 80
A +GV F F SS +Y + P V D+ + VE+ + +
Sbjct: 105 ALRTGVSFFCFASSVAVYGHGETPMRESSIPVPADSYGNAKLTVERELETTMRTQGLPFT 164
Query: 81 SFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
+FR + G N ++ FF++I+R P+ + G G Q ++V+D+ ++ A
Sbjct: 165 AFRMHNVYGEWQNMRDPYRNAVAIFFNQILRGEPISVYGDGGQVRAFSYVKDIVDVIVRA 224
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 195
E E A FN+ S R T+ +A+ AAG+P + + P + M
Sbjct: 225 PET-EKAWGRAFNVGSSRTNTVLELAQAVRAAAGVPSHPIAHLPARDEV----------M 273
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEID 242
Y A+++ G + T L + L +G + FEI+
Sbjct: 274 VAYTATEEAREVFGDWADTPLADGLARTAAWAASVGPAELRSSFEIE 320
>gi|321312938|ref|YP_004205225.1| hypothetical protein BSn5_07860 [Bacillus subtilis BSn5]
gi|320019212|gb|ADV94198.1| hypothetical protein BSn5_07860 [Bacillus subtilis BSn5]
Length = 309
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 16/229 (6%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI 72
NF + V + K G+K LF SS+ ++ + + P+ E P + + ++ E+Y+
Sbjct: 86 NFEGTKNVTEVCKELGIKTLLFSSSSEVFGDSPDYPYTESSQKLPKSAYGKAKLKSEEYL 145
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDL 128
E S R K +++ FF +P+ G G Q +++ D+
Sbjct: 146 KEQASASLHVRVVRYFNVYGPKQRQDFVINKFFSLAEAGAELPLYGDGGQIRCFSYISDI 205
Query: 129 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 188
+ LA+ + +A + FN+ +D +++ G+A+ G E HY K G D +
Sbjct: 206 VNGTYLALLHKGSAYED-FNIGNDLPISIKGLAEKINVMTGREKE--HYTFKKLGEDGVR 262
Query: 189 AFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAM 237
AK +LG+ NL E L+ +K+ R K+ +
Sbjct: 263 GKDIEIFKRAPSIEKAKRLLGYAPKINLDEGLR-----LIKVERQKQKL 306
>gi|188591883|ref|YP_001796481.1| GDP fucose synthetase [Cupriavidus taiwanensis LMG 19424]
gi|170938257|emb|CAP63242.1| GDP-L-fucose synthetase;
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
[Cupriavidus taiwanensis LMG 19424]
Length = 330
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 39/245 (15%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKP 61
+ N + V A +GV+Q LF+ S+ IY +P E + G + +
Sbjct: 86 HQNLAIATNVIHAAWQAGVRQLLFLGSSCIYPRLAPQPICEASLLTGALEPTNAPYAIAK 145
Query: 62 DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFD-RIVRKRPVP 111
AG + + Y + +++ P + G G+N + F D R+ VP
Sbjct: 146 IAGIMLCDSYNRQYGTDYRCVMPTNLYGPGDNYHPDNSHVIPGLVRRFHDARLAGSARVP 205
Query: 112 IPGSGMQFTNIAHVRDL--SSMLTLAVENP---EAASSNIFNLVSDRAVTLDGMAKLCAQ 166
+ G+G H DL + + +A+ P EAA + N+ SD V++ +A L AQ
Sbjct: 206 VWGTGKPLREFLHADDLARACLHVMALSTPAYREAAPAGFLNVGSDDEVSIGALAALVAQ 265
Query: 167 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 226
G I K G P + + A R GWR L + L+ +EE
Sbjct: 266 VTGYRGTIAFEADKPDGT------PRKRLDSSAIMRT-----GWRPRIALHDGLRGVYEE 314
Query: 227 YVKIG 231
+ G
Sbjct: 315 ACRTG 319
>gi|409356804|ref|ZP_11235191.1| dTDP-glucose 4-epimerase [Dietzia alimentaria 72]
Length = 312
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 90/219 (41%), Gaps = 28/219 (12%)
Query: 24 VADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFS- 77
+A+ A+ +GV++ +F SS G IY P E P E V P AG V E Y+ E FS
Sbjct: 105 LAEAARRAGVRRIVFTSSGGSIYGPVTELPVAESQPVDPLSPYAAGKVAGEIYL-EMFSR 163
Query: 78 ----NWASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 129
WA P + G + E F R++ +P + G G + V D+
Sbjct: 164 LYGIEWAGVAPANVYGPRQDPHGEAGVVAIFSQRLLAGQPTRVFGDGGNTRDYVFVDDVV 223
Query: 130 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 189
A PEAA FN+ + + G+ L AQAAG + Y P G A+ A
Sbjct: 224 DAFVRAARVPEAAGLR-FNVGTGVETSDRGLHTLVAQAAG-AADDPEYAPARLGDVARSA 281
Query: 190 F-PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
FR A ++LGW + E + E +
Sbjct: 282 LDAFR----------AAEVLGWEPKVPISEGVARTVEYF 310
>gi|15077452|gb|AAK83179.1|AF333038_24 putative NDP-glucose 4-epimerase [Streptomyces viridochromogenes
Tue57]
Length = 342
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 23/227 (10%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA---GHVQVEKYISENFSN----WA 80
A +GV F F SS +Y + P V D+ + VE+ + +
Sbjct: 105 ALRTGVSFFCFASSVAVYGHGETPMRESSIPVPADSYGNAKLTVERELETTMRTQGLPFT 164
Query: 81 SFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
+FR + G N ++ FF++I+R P+ + G G Q ++V+D+ ++ A
Sbjct: 165 AFRMHNVYGEWQNMRDPYRNAVAIFFNQILRGEPISVYGDGGQVRAFSYVKDIVDVIVRA 224
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 195
E E A FN+ S R T+ +A+ AAG+P + + P + M
Sbjct: 225 PET-EKAWGRAFNVGSSRTNTVLELAQAVRAAAGVPSHPIAHLPARDEV----------M 273
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEID 242
Y A+++ G + T L + L +G + FEI+
Sbjct: 274 VAYTATEEAREVFGDWADTPLADGLARTAAWAASVGPAELRSSFEIE 320
>gi|383620908|ref|ZP_09947314.1| NAD-dependent epimerase/dehydratase [Halobiforma lacisalsi AJ5]
Length = 331
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+EN N P + G + + +++ DR+ R V IPG G + +V D++S L
Sbjct: 149 AENGVNAIPPPPPIVYGPHDYTERLDFWIDRVNRFDRVVIPGDGTNLWHRVYVEDVASAL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA--AGLPVEIVHYDPK---AAGIDAK 187
+ E E + +N R VT++ M +L A + VE+VH P+ A GI+ +
Sbjct: 209 RIVAERGEPGEA--YNTGDRRLVTIEEMVELIADQVDSTADVEVVHAGPRELAAGGIELE 266
Query: 188 KAFPFRNM-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 235
+R H A + A LGW ST L E + E++++ RD +
Sbjct: 267 DYPLYREYPHVMATNKLAD--LGWESTP-LEEAMARAVEDHLESDRDGR 312
>gi|407973810|ref|ZP_11154721.1| NAD-dependent epimerase/dehydratase [Nitratireductor indicus C115]
gi|407430870|gb|EKF43543.1| NAD-dependent epimerase/dehydratase [Nitratireductor indicus C115]
Length = 298
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 33/198 (16%)
Query: 26 DWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPDAGHVQVEKYISEN----FSNWA 80
D A+++GVK+ +F+S+ +Y P AD E D +PD + +V K +EN SN +
Sbjct: 106 DAARTAGVKRAVFLSTRAVYGPRADGVMLDEADACRPDTLYGEV-KLAAENGLAGLSNES 164
Query: 81 ----SFRPQYMIGSGNNKDCEEW--FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
S R + G +W F+ + RPV + H RD+++ + L
Sbjct: 165 FAGISLRVTGVYGPAGPGQAHKWAGLFEDFLEGRPV-----APRVATEVHGRDVAAAVML 219
Query: 135 AVENP-EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
++ P +A S+ FN VSD A+ + L A+ +GL + + Y DA K R
Sbjct: 220 VLDAPMQAVSAQTFN-VSDIALDRHDLLALVARESGLNLPLPEY------ADAGKVNAMR 272
Query: 194 NMHFYAEPRAAKDILGWR 211
A LGW+
Sbjct: 273 TERLQA--------LGWK 282
>gi|390933719|ref|YP_006391224.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569220|gb|AFK85625.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 316
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F D+++ + I G G Q + +V+D++ LA+E + I N+ ++R+ T++
Sbjct: 187 FIDKMLSGKNPVIFGDGNQTRDFIYVKDVAKANLLALE---KGDNEIINISTNRSTTINE 243
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+ ++ + P++ ++ +P+ I +H Y + + AKD+L W+ +L +
Sbjct: 244 LVEIMNKFMEKPLKPIYKEPRKGDI----------LHSYLDNKKAKDVLRWKPDYSLEDG 293
Query: 220 LKERFEEY 227
LKE + Y
Sbjct: 294 LKETIKYY 301
>gi|187779689|ref|ZP_02996162.1| hypothetical protein CLOSPO_03285 [Clostridium sporogenes ATCC
15579]
gi|187773314|gb|EDU37116.1| NAD dependent epimerase/dehydratase family protein [Clostridium
sporogenes ATCC 15579]
Length = 728
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-NW--------ASFR 83
VK+F+F SSA IY + P E ++ +P + + + KY+ E + W FR
Sbjct: 108 VKKFIFASSAAIYGNNENIPLTEKEIAEPLSPY-GISKYVGEGYCKKWNEIYSLDTICFR 166
Query: 84 -------PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
Q +IG G F D I + + + + G G Q + +V DL+ L A
Sbjct: 167 FSNVYGPRQGIIGEGG---VVSIFMDNITKDQEITLNGDGEQTRDFIYVSDLTDALFKAA 223
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 196
E+ S ++NL ++ +L+ + K+ + I D K D K H
Sbjct: 224 ESN--ISFGVYNLSTNSRSSLNNLIKILNNLKKIKGIIKKEDRKG---DIK--------H 270
Query: 197 FYAEPRAAKDILGWRSTTNLPEDLKERFEEY---VKI---GRDKKAMQFEIDDKI 245
+ K LGW +L + +K F+ Y K+ +KK +++ DDKI
Sbjct: 271 SSLDNTKIKKALGWIPMVSLEQGIKNTFDWYSTNYKVEENNTEKKKLKY--DDKI 323
>gi|354611937|ref|ZP_09029889.1| NAD-dependent epimerase/dehydratase [Halobacterium sp. DL1]
gi|353191515|gb|EHB57021.1| NAD-dependent epimerase/dehydratase [Halobacterium sp. DL1]
Length = 329
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 11/183 (6%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E N + RP + G ++ + ++ DR+ + +PG G +V D++ L
Sbjct: 149 AERGVNAMAVRPPVVYGPHDHTERLAYWVDRVAEHDELVVPGDGTNLWQRVYVEDVAQGL 208
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID--AKKAF 190
L E E +N+ AVTLD + L A A G VE + P+ I + F
Sbjct: 209 RLVAE--EGDPGEAYNVGDRNAVTLDRLLDLIADALGTDVERAYTSPRELSIVDLSPDDF 266
Query: 191 P-FRNM-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR--DKKAMQFEIDDKIL 246
P +R+ H + + A+ LG+ ST L E ++ E + GR D + E ++++L
Sbjct: 267 PLYRDYPHMLSTAKVAE--LGYESTP-LDEAMERTVEAHRANGRTGDDQGPDREAEERLL 323
Query: 247 ESL 249
+ L
Sbjct: 324 DVL 326
>gi|408677853|ref|YP_006877680.1| UDP-glucose 4-epimerase [Streptomyces venezuelae ATCC 10712]
gi|328882182|emb|CCA55421.1| UDP-glucose 4-epimerase [Streptomyces venezuelae ATCC 10712]
Length = 288
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 77/203 (37%), Gaps = 22/203 (10%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ------- 67
N L W SG + ++ SS+ Y A + P +V+ D G+ Q
Sbjct: 73 GTNLGLDAWYMRWLARSGTPRAVYFSSSAAYPVALQQPGPIRRLVETDIGYQQPGRPDAT 132
Query: 68 --VEKYISENFSNWASFRPQYMI------GSGNNKDCEEWF--FDRIVRKR--PVPIPGS 115
+ K E +A M G G ++D F F R R+R P I G
Sbjct: 133 YGLAKLTGEQLCQYAEAEGTRMTILRPFSGYGGDQDEAYPFPAFIRRARERQDPFEIWGD 192
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G + HV D+ AVE + NL + RA T D +AK+ AAG E+
Sbjct: 193 GTSTRDWIHVDDIVDATLAAVEE---GVTGPVNLGTGRATTFDQLAKMVTAAAGYRPELK 249
Query: 176 HYDPKAAGIDAKKAFPFRNMHFY 198
H G+ + P R + F+
Sbjct: 250 HLPAAPQGVHHRVCDPSRMLDFH 272
>gi|268578633|ref|XP_002644299.1| Hypothetical protein CBG14085 [Caenorhabditis briggsae]
Length = 342
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 17/211 (8%)
Query: 32 GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVEKYISENF--SNWASFRPQYM 87
GVK+ + IS+ +Y + D P E + K E S W S++ Y+
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187
Query: 88 IGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
+ NN +++ K +P P+ G G+ + +V D S +T
Sbjct: 188 MVRMNNVYGPRQIHTKLIPKFTKLALDGQPYPLMGDGLHTRSWMYVEDCSEAITRVAL-- 245
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
E I+N+ +D +T + K+ +I++ +P A P+ + +Y
Sbjct: 246 EGTLGEIYNIGTDFEMTNIELTKMIHSTVS---KILNREPTAPTFAPIPDRPYHDRRYYI 302
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
+ K+ +GW+ TT E L E YVK+
Sbjct: 303 DFSKIKNAMGWQCTTPFSEGLMTTIEYYVKL 333
>gi|448495643|ref|ZP_21610088.1| NAD-dependent epimerase/dehydratase [Halorubrum californiensis DSM
19288]
gi|445687736|gb|ELZ40011.1| NAD-dependent epimerase/dehydratase [Halorubrum californiensis DSM
19288]
Length = 330
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 26/222 (11%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-------------- 78
V +++ISS Y A+E P EG+ Q E + N
Sbjct: 93 VDGYVYISSGSSYA-AEEIPKREGETPLEPCTDAQATDDTHETYGNRKAEGDRAVFAAAE 151
Query: 79 ----WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ RP + G + + +++ DR++ + V +PG G + A+V D++S L
Sbjct: 152 AGVSAMAVRPCIVYGPYDYTERLDYWIDRVLTQDRVVVPGDGQNLWHRAYVEDVASALRA 211
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP 191
E E ++ +N+ RA+TL + A A + E+V A G+D
Sbjct: 212 VAERGEPGAA--YNVGDRRALTLRETLETIADVADVDCEVVPASEDALAAGGLDPDDFVL 269
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+R + A D LGW ST + E + EE+ + RD
Sbjct: 270 YREYPHLLDTCALAD-LGWESTP-VAEAMARTVEEHRESDRD 309
>gi|121534554|ref|ZP_01666376.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans
Nor1]
gi|121306806|gb|EAX47726.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans
Nor1]
Length = 306
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 24 VADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDA----GHVQVEKYISENFSN 78
V + +SSGVK+ +F SSA +Y PAD P E D +P + + EKY+ + N
Sbjct: 99 VLEACRSSGVKRIVFASSAAVYGDPADLPLSEEAD-KQPTSFYGLSKLVAEKYLELYYKN 157
Query: 79 ----WASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
+ + R + G E F + + P+ + G G Q + +VRD++
Sbjct: 158 FGLEYVALRYANVYGERQTDSGEGGVISIFLTKALVDEPLTVFGDGTQTRDFIYVRDVAE 217
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
A+ A S +N+ + + ++++ + L Q P+ + P+A I
Sbjct: 218 ANYRALFTANANRS--YNISTGQEISVNELIGLMQQLVEKPLITQYAPPRAGDI------ 269
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDL 220
+R++ A RA +LGW+ +L E L
Sbjct: 270 -YRSVLNNAAARA---MLGWQPNYSLAEGL 295
>gi|313683518|ref|YP_004061256.1| NAD-dependent epimerase/dehydratase [Sulfuricurvum kujiense DSM
16994]
gi|313156378|gb|ADR35056.1| NAD-dependent epimerase/dehydratase [Sulfuricurvum kujiense DSM
16994]
Length = 312
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 24/218 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS------ 77
+ ++A G+ +F++ S+ IY D+ P E P + + + K +E +
Sbjct: 100 LLNFAVEEGIGRFIYASTMSIYGDVDDKPIRENQAKNPKS-YYGITKLAAEQYVRVFSDR 158
Query: 78 -NWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
N SFR + G G N + + +R PV + G ++ ++ ++ D+ +
Sbjct: 159 LNTTSFRLFNVYGPGQNMANLKQGMVSIYLAYFMRNEPVIVKGFKERYRDLTYIDDVVDV 218
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 191
T +++NP +NL + + T++ + A G P +++ + P
Sbjct: 219 WTASIDNP-LTYGKTYNLATGKKTTVEALLNELKTAWGSPEYPIYF---------TEGTP 268
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
YA+ ++ LGW +L E + F +VK
Sbjct: 269 GDQFGIYADITQLQNDLGWEPKVSLSEGI-HHFVNWVK 305
>gi|389793504|ref|ZP_10196667.1| NAD-dependent epimerase/dehydratase [Rhodanobacter fulvus Jip2]
gi|388433718|gb|EIL90678.1| NAD-dependent epimerase/dehydratase [Rhodanobacter fulvus Jip2]
Length = 308
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 29/208 (13%)
Query: 36 FLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-SNWAS--------FRPQ 85
L++SS G +Y P E ++P + H K SE F + W S RP
Sbjct: 109 LLYMSSGGSLYADTTTQPSSESARLQPRSYH-GATKLASETFIAAWCSQSGGKATILRPS 167
Query: 86 YMIGSGNNKDCEEWF------FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
+ G G + + F F ++R + + G G + ++ DL + L + NP
Sbjct: 168 NVYGPGQPE--RKGFGVIPAAFGTMLRGETLHVWGDGSAQRDYVYIDDLVELCALVLTNP 225
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
A + FN S +V+L+ + + AG P++ Y+P A +DA
Sbjct: 226 MPAGARTFNACSGTSVSLNELFGIMESVAGQPLQ-RSYEPGRA-VDASC--------IAM 275
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFEEY 227
+P A GW T+L L++ +E +
Sbjct: 276 DPTLAAQAHGWHHRTSLEAGLRQTWERF 303
>gi|218135292|ref|ZP_03464096.1| hypothetical protein BACPEC_03197 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990677|gb|EEC56688.1| NAD dependent epimerase/dehydratase family protein [[Bacteroides]
pectinophilus ATCC 43243]
Length = 290
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
N N + +AD+AK++GV F++ISS + P E VKP A KY E
Sbjct: 83 NTNCLGTQNIADFAKTAGVSCFVYISSVPVIGIPQYVPITEKHPVKP-ATVYHYTKYFGE 141
Query: 75 NFSN--------WASFRPQYMIGSG--NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+ R +G G +NK F R + +P+ I G+GM+ N
Sbjct: 142 QIVQGLGACGIRYGCLRIPSPVGCGMPDNK-IFSVFVKRCLENQPLQIYGNGMRVQNYLD 200
Query: 125 VRDLSSMLTLAVEN-PEAASSNIFNLVSDRAVTLDGMAKLCAQ 166
VRD LT AV+ E+ ++ ++N+ + ++ +A+LC +
Sbjct: 201 VRD----LTCAVDRFIESDANGVYNIAGNSISDME-LAELCKE 238
>gi|448449544|ref|ZP_21591769.1| NAD-dependent epimerase/dehydratase [Halorubrum litoreum JCM 13561]
gi|445813173|gb|EMA63154.1| NAD-dependent epimerase/dehydratase [Halorubrum litoreum JCM 13561]
Length = 330
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 26/222 (11%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS----------- 81
V +++ISS Y A+E P EG+ Q E + N +
Sbjct: 93 VDGYVYISSGSSYA-AEEIPKREGETPLEPCTDEQAVDDDHETYGNRKAEGDRAVFAAAE 151
Query: 82 -------FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
RP + G + + +++ DR++ V +PG G + A+V D++S L +
Sbjct: 152 AGVAAMAVRPCIVYGPHDYTERLDYWIDRVLTHDRVVVPGDGQNLWHRAYVEDVASALRI 211
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP 191
E E ++ +N+ RA+TL + A AG+ E+V A G++
Sbjct: 212 VAERGEPGAA--YNVGDRRALTLRETLETIADVAGIDCELVTASDDALAAGGLEPDDFVL 269
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+R + A D LGW ST + E + EE+ + RD
Sbjct: 270 YREYPHLLDTCALAD-LGWESTP-VDEAMARTVEEHRESDRD 309
>gi|222479221|ref|YP_002565458.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
gi|222452123|gb|ACM56388.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
Length = 330
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
+ RP + G + + +++ DR++ + V +PG G + A+V D++S L + E E
Sbjct: 158 AVRPCIVYGPYDYTERLDYWIDRVLSQDHVVVPGDGQNLWHRAYVEDVASGLRIVAERGE 217
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNMHF 197
A ++ +N+ +A+TL + A AAG E+V A G++ +R
Sbjct: 218 AGAA--YNVGDRQALTLAETLETIADAAGTDCEVVTASADALAAGGLEPDDFVLYREYPH 275
Query: 198 YAEPRAAKDILGWRST 213
+ A D LGW ST
Sbjct: 276 LLDTCALAD-LGWEST 290
>gi|429195815|ref|ZP_19187815.1| NAD-binding protein [Streptomyces ipomoeae 91-03]
gi|428668472|gb|EKX67495.1| NAD-binding protein [Streptomyces ipomoeae 91-03]
Length = 310
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 21/204 (10%)
Query: 32 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF---------SNWASF 82
G + LF S++ IY E V +P + + + K +SE+
Sbjct: 99 GAEHLLFCSTSEIYGDGTGRVLSEDAVARPHSLYGRA-KLLSESVVAEFARSPGRRATVV 157
Query: 83 RPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-- 139
RP + G G D F + R P+ + G G Q +V DL++ + A+ P
Sbjct: 158 RPFNVYGPGQRPDFVVSRFVELASRGEPLTVHGDGAQIRTFTYVDDLAAGMWAALCRPAS 217
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
E A I+NL S + ++ + ++ AG +V P AG DA + R
Sbjct: 218 EGAPFEIYNLASQQTFSITEVVEMVNDLAGSDSPVVRISPGEAGRDAAQEVTVRI----- 272
Query: 200 EPRAAK--DILGWRSTTNLPEDLK 221
P AAK + LG+R++ L E ++
Sbjct: 273 -PSAAKAEEHLGFRASVTLSEGIR 295
>gi|448480283|ref|ZP_21604536.1| NAD-dependent epimerase/dehydratase [Halorubrum arcis JCM 13916]
gi|445822222|gb|EMA71994.1| NAD-dependent epimerase/dehydratase [Halorubrum arcis JCM 13916]
Length = 351
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 24/221 (10%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS----------- 81
V +++ISS Y A+E P EG+ Q E + N +
Sbjct: 114 VDGYVYISSGSSYA-AEEIPKREGETPLEPCTDEQAVDDDHETYGNRKAEGDRAVFAAAE 172
Query: 82 -------FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
RP + G + + +++ DR++ V +PG G + A+V D++S L +
Sbjct: 173 AGVAAMAVRPCIVYGPHDYTERLDYWIDRVLTHDRVAVPGDGQNLWHRAYVEDVASALRV 232
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY--DPKAAGIDAKKAFPF 192
E E ++ +N+ RA+TL + A AG+ E+V D AAG F
Sbjct: 233 VAERGEPGAA--YNVGDRRALTLRETLETIADVAGVDCELVTASDDALAAGGLEPDDFTL 290
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+ + A LGW ST + E + EE+ + RD
Sbjct: 291 YREYPHLLDTCALADLGWESTP-VDEAIARTVEEHRESDRD 330
>gi|345006718|ref|YP_004809571.1| NAD-dependent epimerase/dehydratase [halophilic archaeon DL31]
gi|344322344|gb|AEN07198.1| NAD-dependent epimerase/dehydratase [halophilic archaeon DL31]
Length = 330
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E N S RP + G + +++ DR+ + +PG G + A+ D+ S L
Sbjct: 150 AEEGVNAMSVRPCIVYGPYDYTGRMDYWLDRVDTHDRIVVPGDGQNLWHRAYAPDVGSAL 209
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKA 189
E E +N+ RAVTL+ M L A A +E+V + AAG++ +
Sbjct: 210 RTVAE--EGEPGKFYNVGDQRAVTLEEMLDLVADAMDTDLEVVTAGERELAAAGLEPEDF 267
Query: 190 FPFRNMHFYAEPRAAKDILGWRST 213
+R + D LGW ST
Sbjct: 268 ILYREYPHMLDTSTLAD-LGWEST 290
>gi|453054133|gb|EMF01588.1| carbohydrate epimerase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 342
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 23/223 (10%)
Query: 32 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDA---GHVQVEKYISENFSN----WASFRP 84
GV F F SS +Y + P V D+ + VE+ + + +FR
Sbjct: 109 GVSFFCFASSVAVYGHGETPMRESSIPVPADSYGNAKLTVERELETTMRTQGLPFTAFRM 168
Query: 85 QYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
+ G N ++ FF++I+R P+ + G G Q ++V+D+ ++ A E
Sbjct: 169 HNVYGEWQNMRDPYRNAVAIFFNQILRGEPISVYGDGGQVRAFSYVKDIVDVIVRAPET- 227
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
EAA FN+ S R T+ +A+ +AAG P D A + A+ M Y
Sbjct: 228 EAAWGRAFNVGSSRTNTVLELAQAVRRAAGAP------DHPIAHLPARDEV----MVAYT 277
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEID 242
A+++ G + T L + L +G + + F+I+
Sbjct: 278 ATEEAREVFGDWADTPLADGLARTAAWAASVGPAELSPSFDIE 320
>gi|430003772|emb|CCF19561.1| putative NAD-dependent epimerase/dehydratasen; putative UDP-glucose
4-epimerase [Rhizobium sp.]
Length = 368
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R+ +P I G Q + HVRD++ LA E P +AS ++ N+ S +A T++
Sbjct: 227 FASRLANGQPPTIFEDGQQRRDFVHVRDVARAFRLAYEQP-SASGHVINVGSGQAYTVEE 285
Query: 160 MAKLCAQAAGLPV---EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL 216
+A L A A G+P EI+H KA D + F A+ A+++LG++ L
Sbjct: 286 VATLLADAMGVPEIKPEIMH---KARSGDIRNCF--------ADISKARELLGFKPQYKL 334
Query: 217 PEDLKERFEEYVK 229
ED F E+V+
Sbjct: 335 -EDSLAPFVEWVR 346
>gi|390450716|ref|ZP_10236302.1| NAD-dependent epimerase/dehydratase [Nitratireductor aquibiodomus
RA22]
gi|389661871|gb|EIM73462.1| NAD-dependent epimerase/dehydratase [Nitratireductor aquibiodomus
RA22]
Length = 316
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 40/239 (16%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N ++ + + A GV++FLF+ S+ IY K AD+P P E +
Sbjct: 85 DNLMIEANIIEAAHQVGVEKFLFLGSSCIYPKFADQPIRESALLTGELEPTNEWYAIAKI 144
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG + Y + ++ S P + G G+N D + ++RK R + I
Sbjct: 145 AGIKLAQSYRKQYGHDYISAMPTNLYGPGDNFDLDSSHVMPALIRKAHEAKLREDREIVI 204
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G HV D + L ++N N+ S +++ + KL + G
Sbjct: 205 WGTGKPCREFLHVDDCADALVFLLKNYSGYEH--VNVGSGEDISILDLTKLVCEVVGFEG 262
Query: 173 EIVHYDPKAAGIDAK--KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+IVH K G K A R M GWR +L + +K ++ +++
Sbjct: 263 KIVHDLTKPDGTPRKLMSAEKLRGM-------------GWRPHISLGDGIKSAYDAFLR 308
>gi|381186251|ref|ZP_09893823.1| GDP-L-fucose synthetase [Flavobacterium frigoris PS1]
gi|379651686|gb|EIA10249.1| GDP-L-fucose synthetase [Flavobacterium frigoris PS1]
Length = 316
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 102/236 (43%), Gaps = 36/236 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP---PHVEGDVVKPD--------AG 64
N ++Q + D A SGV++F+F+ S+ IY K A +P ++ D ++P
Sbjct: 84 NMQIQNNLIDTALKSGVEKFIFLGSSCIYPKLAPQPLKEEYLLTDTLEPTNEWYAIAKIT 143
Query: 65 HVQVEKYISENFS-NWASFRPQYMIGSGNNKD-CEEWFFDRIVRK---------RPVPIP 113
V+ + I + F+ ++ S P + G+ +N D ++RK PV +
Sbjct: 144 GVKACQAIRKQFNKDYVSLMPTNLYGTHDNFDLTSSHVLPAMMRKFHEAKENGNTPVTLW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
GSG V D++ + A+EN ++N+ + +T+ +A+ + G E
Sbjct: 204 GSGTPMREFLFVDDMAQAVVFALENK--LPDYLYNVGTGEDLTIKQLAETIQKITGHQGE 261
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
I+ K G +K MH LGW+ L E +++ ++ +++
Sbjct: 262 IIWDSSKPDGT-PRKLMDISKMH----------ALGWKHQVQLEEGIQKTYDWFLE 306
>gi|340617983|ref|YP_004736436.1| NAD(P)-dependent sugar epimerase/dehydratase [Zobellia
galactanivorans]
gi|339732780|emb|CAZ96080.1| NAD(P)-dependent sugar epimerase/dehydratase [Zobellia
galactanivorans]
Length = 334
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 91 GNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 144
G N++ W F D I++ + +PI G GMQ V D + + A PE A+
Sbjct: 184 GPNQNLSWWGGPQSVFIDCILKNKEIPIHGDGMQTRTFTFVDDTVAGIYAATMKPE-ANG 242
Query: 145 NIFNLVSDRAVTLDGMAKLCAQAAGLP----VEIVHYDPKAAGIDAKKAFPFRNMHFYAE 200
IFN+ +++ +T+ +A + + + P ++++ Y+ +AG + M +
Sbjct: 243 EIFNIGANQEITIIELANMLKRISNEPRTPEIKLIPYNEISAGRKYQDV-----MRRVPD 297
Query: 201 PRAAKDILGWRSTTNLPEDLKERFE 225
A+ ILG ++ T+L E L+ F+
Sbjct: 298 TTKAEKILGIKAQTSLEEGLRITFD 322
>gi|398789108|ref|ZP_10551080.1| NAD-dependent epimerase/dehydratase [Streptomyces auratus AGR0001]
gi|396991749|gb|EJJ02883.1| NAD-dependent epimerase/dehydratase [Streptomyces auratus AGR0001]
Length = 295
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 36/235 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N +Q V A +GV++ LF+ S+ IY K A +P P E +
Sbjct: 67 DNLSIQLSVIAGAHHAGVRRLLFLGSSCIYPKHAAQPITEDALLSGPLEPTNEAYAIAKI 126
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK--------RP-VPI 112
AG VQ+ Y + +++ S P + G G+N D E ++R+ RP + +
Sbjct: 127 AGLVQIRSYRRQYGASFISAMPTNLYGPGDNFDLETSHVLPALIRRFHEAKQQGRPELTL 186
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G HV DL++ + + + + N+ +T+ +A A A G
Sbjct: 187 WGTGTPLREFLHVDDLAAACEVLLRRYD--GDDTVNVGCGEDLTIAELASCVAAAVGYEG 244
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
I +DP +K M LGW T L E + +E +
Sbjct: 245 RIA-FDPSRPDGTPRKLLDISRMR----------ALGWAPTIPLAEGIARTYEAW 288
>gi|374308310|ref|YP_005054741.1| dTDP-glucose 4,6-dehydratase [Filifactor alocis ATCC 35896]
gi|291166638|gb|EFE28684.1| dTDP-glucose 4,6-dehydratase [Filifactor alocis ATCC 35896]
Length = 308
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDA-------GHVQVEKYISENFSNWASFRPQY 86
K+++ ISS+ +Y P E V + ++ EK + + RP Y
Sbjct: 85 KEYILISSSAVYPEDGIQPFTEECKVGENKFWGQYGINKIEAEKLLLNRNPSAYIVRPPY 144
Query: 87 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 146
+ G NN E + FD V R +P +G V D+ + ++ + S++I
Sbjct: 145 LYGPMNNVYRESFVFDCAVSGRKFYLPNNGSMKLQFLFVEDMCKFFDILLQ--KKPSNHI 202
Query: 147 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD 206
FN+ + + ++ +C + G +E V+ + + ++ + F F + + D
Sbjct: 203 FNVGNSKLISTKDWVSMCYEIVGEKLEFVYVNQE---VEQRNYFSFYDYEYRLCVDKQND 259
Query: 207 ILGWRSTTNLPEDLKERFEEY 227
++ ++ E LKE +E Y
Sbjct: 260 LM--LECKDVKEGLKESYEWY 278
>gi|309776442|ref|ZP_07671428.1| putative dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae
bacterium 3_1_53]
gi|308915833|gb|EFP61587.1| putative dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae
bacterium 3_1_53]
Length = 308
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 12/169 (7%)
Query: 36 FLFISSAGIYKPADEPPHVEGDVV-------KPDAGHVQVEKYISENFSNWASFRPQYMI 88
++ ISS+ +Y P E + K ++ E+ + E N RP Y+
Sbjct: 96 YILISSSAVYSEKTPQPFNEAAALAVNKYWGKYGTDKIEAEEALLERNPNAYILRPPYLY 155
Query: 89 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 148
G NN E + FD + R +P +G HV DL + + +E S +IFN
Sbjct: 156 GPMNNVYREAFVFDCALAGRTFYLPKAGEMKLQFFHVHDLCRFIDVLIE--IKPSQHIFN 213
Query: 149 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 197
+ + +++ +LC Q G E V+ I+ K F F +
Sbjct: 214 VGNKDTLSIRRWVELCYQVVGSQAEFVN---VYKDIEQKNYFSFYEYEY 259
>gi|398884435|ref|ZP_10639370.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM60]
gi|398194593|gb|EJM81662.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM60]
Length = 310
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN 75
+NF V + G+K+ +F SSA IY E ++ D K +K SE
Sbjct: 96 SNFVGTLNVCEKMLKVGIKRVVFASSAAIYGNNGEGSAIDEDTPKSPLTPYASDKLASEY 155
Query: 76 FSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQF 119
+ ++ +R ++ + G +D F +R + ++PV I G G Q
Sbjct: 156 YLDF--YRREHGLEPVVLRFFNIFGPRQDPSSPYSGVISIFTERAISRKPVAIFGDGEQT 213
Query: 120 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 179
+ V DL S+L AVE E ++S + N+ R+ +L+ + +A G P+ + + P
Sbjct: 214 RDFVFVEDLVSILVQAVETTEPSASAM-NVGLSRSTSLNDLITELGRATGRPLTVTYQAP 272
Query: 180 KAAGIDAKKAFPFRNMHFYAEP 201
+ I +A R + + P
Sbjct: 273 RRGDIRHSRANNARLLERFTLP 294
>gi|33599116|ref|NP_886676.1| UDP-glucose 4-epimerase [Bordetella bronchiseptica RB50]
gi|33575162|emb|CAE30625.1| putative UDP-glucose 4-epimerase [Bordetella bronchiseptica RB50]
Length = 307
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 3 FNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD 62
F+ A+ A+ +TN R+ V D+ G + ++ SS+ +Y D E ++
Sbjct: 80 FDSAEAVAIAQTNR--RIDSTVIDFCHEIGAR-LVYCSSSSVYGRLDSTAVAESRALERA 136
Query: 63 AGHVQ----VEKYISENFSNWASFRPQYMIGSGN-NKDCEEWFFDRIVRKRPVPIPGSGM 117
G+V E I++ ++A+ R G G + F +R ++ P+ G+G
Sbjct: 137 TGYVAEKIWAEGEIAKRLPSYATLRLCAPYGPGQKTRTVLRIFIERALQGAPILYFGTGS 196
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 166
+ + HV+D+++ + A++ P + +FN+ R +T+ + L ++
Sbjct: 197 REQDFVHVKDIAAAVVAALDRPTV--NGVFNISGGRPITMRELGMLVSR 243
>gi|408403557|ref|YP_006861540.1| NAD-dependent epimerase/dehydratase family, includes UDP-galactose
4-epimerase-like proteins [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408364153|gb|AFU57883.1| NAD-dependent epimerase/dehydratase family, includes UDP-galactose
4-epimerase-like proteins [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 313
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 25/224 (11%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGH 65
T+ N V + ++GV F+F SSA +Y A P E ++P AG
Sbjct: 93 TDVNVNGTASVLEACTNAGVGSFVFASSAAVYGEAKILPVPEDKELRPISPYGESKVAGE 152
Query: 66 VQVEKYI-SENFSNWASFRPQYMIGSGNN---KDCEEWFFDRIVRKRPVPIPGSGMQFTN 121
VE Y S + S R + G G N F +R+ + P I G GMQ +
Sbjct: 153 KLVESYQKSGKIPHAISLRFFNVYGEGQNPRYAGVITKFTERLSKGLPPVIYGDGMQTRD 212
Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 181
+ D+ + LA+ + + +FN+ + +A+T++ +AK + GL + H
Sbjct: 213 FISINDVVDAIMLAI---GSGTFGVFNIGTGKAITINELAKEMMRMFGLDLRPEH----- 264
Query: 182 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
+KA +H A+ + + LG+ + L +L+ E
Sbjct: 265 -----QKANHGEILHSCADIKRSSTALGFVARRTLEVELRNIIE 303
>gi|254478563|ref|ZP_05091937.1| NAD dependent epimerase/dehydratase family protein
[Carboxydibrachium pacificum DSM 12653]
gi|214035492|gb|EEB76192.1| NAD dependent epimerase/dehydratase family protein
[Carboxydibrachium pacificum DSM 12653]
Length = 311
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-- 81
+ + + SGVK+ ++ SSA +Y + P E + P + + K+ +E++ S
Sbjct: 99 LLECCRKSGVKKIVYASSAAVYGNPEYLPIDEVHKINP-ISYYGISKHTAEHYFEVYSQL 157
Query: 82 FRPQYMI--------------GSGNNKDCEEWFFDRIVR-KRPVPIPGSGMQFTNIAHVR 126
+ +Y I G G F D++++ +RP+ I G G Q + +V+
Sbjct: 158 YGLKYTILRYANVYGIRQDPKGEGG---VISIFIDKMLKGERPI-IFGDGKQTRDFVYVK 213
Query: 127 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA 186
D++ LA++ + + N+ +++ +++ + ++ + ++ ++ +P+ I
Sbjct: 214 DVAKANLLALKR---GDNEVVNISTNKPTSINELVEIMNKIMNTSLKPIYTEPRKGDI-- 268
Query: 187 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
+H Y + + A ++LGW+ +L + L+E E Y
Sbjct: 269 --------IHSYLDNKKALEVLGWKPEYSLEDGLRETIEYY 301
>gi|423613391|ref|ZP_17589251.1| hypothetical protein IIM_04105 [Bacillus cereus VD107]
gi|401242553|gb|EJR48928.1| hypothetical protein IIM_04105 [Bacillus cereus VD107]
Length = 314
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 97/246 (39%), Gaps = 46/246 (18%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N +Q V D A SGVK+ LF+ S IY +P E + G++ +
Sbjct: 83 DNLMIQTNVIDSAYRSGVKKLLFLGSTCIYPKMAPQPLKEEYLLTGELEPTNDAYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG E Y + + + S P + G +N D ++RK V +
Sbjct: 143 AGIKMCESYNRQYGTKYISVMPTNLYGPNDNFDLHTSHVLPALIRKFHEAKENNAEFVEV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G + DL+ ++N E + I N+ + +++ +A+ + G
Sbjct: 203 WGTGTPLREFLYSDDLADACVYLMDNYEG--NEIVNIGVGKDLSIKELAEKVKETVGFEG 260
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
E+ K G PR D+ LGW +TT+L E LK+ +E +
Sbjct: 261 ELRFDTSKPDGT----------------PRKLVDVSKLNSLGWEATTSLDEGLKKAYEWF 304
Query: 228 VKIGRD 233
++ ++
Sbjct: 305 LQTEKE 310
>gi|421590428|ref|ZP_16035435.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. Pop5]
gi|403704427|gb|EJZ20312.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. Pop5]
Length = 318
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEP--------------PHVEGDVVKP 61
N ++ V + A +GV++ LF+ S+ IY P D P P E +
Sbjct: 83 QNLMIETNVVNAAWQAGVERMLFLGSSCIY-PRDCPQPIREEYLLTGPLEPTNEPYAIAK 141
Query: 62 DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-WFFDRIVRK---------RPVP 111
AG E Y + + + S P + G +N D + ++RK R +
Sbjct: 142 IAGVKLCESYNRQYGTRYVSGMPTNLYGPNDNYDLDSSHVMPALIRKVHEAKVRGDRQLV 201
Query: 112 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
+ GSG +V D++ +E+ S + N+ + +T+ +A+ + G
Sbjct: 202 VWGSGRPMREFLYVDDMADACVFLMESD--VSEGLINVGTGEDITIRELAETIMRVVGFK 259
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
EIV+ K G K + R A LGWR+TT+L + + + + ++V
Sbjct: 260 GEIVYDQTKPDGTPRK---------LMSVDRLAA--LGWRATTSLSDGITQAYADFV 305
>gi|386817844|ref|ZP_10105062.1| NAD-dependent epimerase/dehydratase [Thiothrix nivea DSM 5205]
gi|386422420|gb|EIJ36255.1| NAD-dependent epimerase/dehydratase [Thiothrix nivea DSM 5205]
Length = 309
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 9 KALFRTNNNFR-LQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ 67
K + FR ++R VA A+ GVKQF+ +S+ G+ G D +
Sbjct: 81 KGITYEETQFRGVERTVAA-AQKQGVKQFILMSANGVKA---------GGTAYQDT-KFR 129
Query: 68 VEKYISENFSNWASFRPQYMIGS--GNNKDCEEWFFDRIVRKRPVPIPG--SGMQFTNIA 123
E+ + + W FRP + G GN + C + D+ + + P+P P G+
Sbjct: 130 AEQCVQASGLGWTIFRPSVIFGDPRGNMEFCTQ--LDKELVQPPIPAPLFFGGLNIMQAG 187
Query: 124 -------HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 169
HV+D++S AV NP AA+ +F L A T + + AQ AG
Sbjct: 188 QFQMAPVHVQDVASAFAAAVGNP-AANQRVFPLCGPDAPTWKAILQTIAQVAG 239
>gi|294494777|ref|YP_003541270.1| NAD-dependent epimerase/dehydratase [Methanohalophilus mahii DSM
5219]
gi|292665776|gb|ADE35625.1| NAD-dependent epimerase/dehydratase [Methanohalophilus mahii DSM
5219]
Length = 310
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 95/242 (39%), Gaps = 45/242 (18%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++ + A GVK+ LF+ S+ IY +P E + G++ V
Sbjct: 83 DNLMIEANIIHAAHIYGVKKLLFLGSSCIYPKFAPQPMKEEYLLTGELESTNEAYAVAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE----------EWFFDRIVRKRPVPI 112
AG + Y + +N+ S P + G +N D E ++ +I + V I
Sbjct: 143 AGIRLCKHYNQQYGTNFISVMPTNLYGPNDNFDLETSHVMPALIRKFHEAKINNESKVTI 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF-NLVSDRAVTLDGMAKLCAQAAGLP 171
GSG HV D++ +EN + A F N+ + +++ +A+L G
Sbjct: 203 WGSGSPKREFLHVDDMADACIYLMENYDYADIGEFVNIGVGKDLSIKELAELIKDVVGYE 262
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEE 226
+IV+ K G PR D+ LGW S+ L E +K +
Sbjct: 263 GDIVYDSSKPDGT----------------PRKLLDVSKLNGLGWTSSIGLKEGIKATYRW 306
Query: 227 YV 228
YV
Sbjct: 307 YV 308
>gi|147921593|ref|YP_684590.1| dTDP-glucose 4,6-dehydratase [Methanocella arvoryzae MRE50]
gi|56295560|emb|CAH04802.1| dtdp-glucose 4,6-dehydratase [uncultured archaeon]
gi|110619986|emb|CAJ35264.1| dTDP-glucose 4,6-dehydratase [Methanocella arvoryzae MRE50]
Length = 312
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 26/220 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEG-----DVVKPDAGHVQVEKYISE---- 74
V + +++GV++ F S++ +Y A+ P E + A + E IS
Sbjct: 103 VLESMRAAGVRKIAFTSTSTVYGEAEVIPTPENYGPLMPISLYGASKLACEAMISAYCHT 162
Query: 75 -NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP----IPGSGMQFTNIAHVRDLS 129
+ +W +R +IGS + FD I R R P I G+G Q + H+ D
Sbjct: 163 FDMQSWI-YRFANIIGS---RGTHGVIFDFIGRLRKDPSKLTILGNGRQSKSYLHISDCV 218
Query: 130 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 189
+ AV N A NIFN+ SD + G+A+ A GL E V ++ K
Sbjct: 219 DGMLFAVRNSNAPV-NIFNIGSDDRFDVTGIARAVASEMGL--ENVEFEYTGGDRGWKGD 275
Query: 190 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
PF + A LGW+ N E ++ E ++
Sbjct: 276 VPFMTLSI-----AKLKALGWKPVHNSEESVRLCVRELLR 310
>gi|357052393|ref|ZP_09113501.1| hypothetical protein HMPREF9467_00473 [Clostridium clostridioforme
2_1_49FAA]
gi|355386733|gb|EHG33769.1| hypothetical protein HMPREF9467_00473 [Clostridium clostridioforme
2_1_49FAA]
Length = 311
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 26/219 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIY----KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW 79
V + + +G K+ ++ SSA I+ P + H + + + EK I +S
Sbjct: 103 VLEAMRHAGTKRIVYSSSAAIFGELTTPTIDEEHPQNADCQYGVSKLAAEKMILA-YSGL 161
Query: 80 ASFRP---QYMIGSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
F +Y G N+ + + F RI P+ I G G Q + + D++
Sbjct: 162 YGFEGICLRYFNIYGVNQRFDLYGNVIPIFAKRIFSGEPITIFGDGSQTRDFLNADDVAR 221
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
+A + S++FN+ S ++T++ +AK+ + +G+ V+I HY P+ G D K
Sbjct: 222 ANYIAAMSD--VKSDVFNIGSGNSITINTLAKMMQRISGINVDI-HYAPERIG-DVK--- 274
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
H A + LG+++ L E LK+ + Y K
Sbjct: 275 -----HCKANADKIFNCLGYKAVVGLEEGLKKYIDWYKK 308
>gi|312200682|ref|YP_004020743.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c]
gi|311232018|gb|ADP84873.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c]
Length = 377
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 92/229 (40%), Gaps = 38/229 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKP---ADEPPHVE---GDVVKPD-------AGHVQVEK 70
V + A+ +GV++ LF S+ +Y AD P V G+ + D AGH+
Sbjct: 94 VCEAARRTGVRRVLFASTVWVYGAVPDADGRPEVGAAGGESLTEDSVIELGRAGHIYTST 153
Query: 71 YISENFSNWASFRPQYMI-----------GSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQ 118
++ S+R Y + G G + F R V P+ + G G Q
Sbjct: 154 KLAAELL-LHSYRETYGLPFTILRYGIPYGPGMRDELVLARFVARAVAGEPLTVAGDGRQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
F +VRDL+ A+ P A + I ++R LD + A G+ +E V
Sbjct: 213 FRRYVYVRDLADAHVRALTAPAAENETIALEGAERISVLDMAEAVRAHFPGVEIEHVPAR 272
Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
P +R AE RAA+ +L WR TT + +++ E Y
Sbjct: 273 PG----------DYRGREVSAE-RAAR-LLDWRPTTTFHDGVRQYVEWY 309
>gi|302873798|ref|YP_003842431.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
gi|307689961|ref|ZP_07632407.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
gi|302576655|gb|ADL50667.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans
743B]
Length = 317
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 25/219 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-----PADEPPHVEGDVVKPDAGHVQVE--KYISENF 76
V + + + V++ ++ SSA +Y P DE VE + H K SE +
Sbjct: 100 VLECCRETKVRKIIYPSSAAVYGNPKYLPVDENHPVEPISFYGISKHTPCHYIKAYSELY 159
Query: 77 S-NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
+ + FR + G + E F +R++RK I G G Q + +V+D+++
Sbjct: 160 NIKYTIFRYANVYGPRQDNHGEGGVVSIFANRLLRKETCYIYGDGKQTRDFIYVKDVANA 219
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 191
LA++ + I ++ S++ VT++ + K+ + + V + + + + I
Sbjct: 220 NVLALDR---GDNEIIDISSNKPVTINQLHKVMKEISKCSVAVEYKEARNGDI------- 269
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
+H Y A LGW+ ++ LKE Y +
Sbjct: 270 ---LHSYLSNEKASGCLGWKDKHDIKSGLKETLNYYYNV 305
>gi|385799181|ref|YP_005835585.1| NAD-dependent epimerase/dehydratase [Halanaerobium praevalens DSM
2228]
gi|309388545|gb|ADO76425.1| NAD-dependent epimerase/dehydratase [Halanaerobium praevalens DSM
2228]
Length = 314
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 24/226 (10%)
Query: 11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK 70
++ NN Q+ + ++ +K+F++ SS+ +Y D+ P E + ++P + + V K
Sbjct: 96 IYNQNNILLTQKLLEAAREAEQLKKFVYASSSSVYGDTDQLPMQEKNRLQPVSPY-GVSK 154
Query: 71 YISEN-----FSNW----ASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFT 120
EN + N+ S R + G G D F + + + I G G Q
Sbjct: 155 LAGENLAYLYYKNFKVPTVSLRYFTVYGQGQRPDMAFHIFIKAFLTGKEINIFGDGKQSR 214
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNL-VSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 179
N +V D++ LA + +A + I N+ S + + L+ L + +I +Y
Sbjct: 215 NFTYVGDIARANILAAQ--KAPAGEIINIGGSGKGIVLNDTLDLIKELTNCNTKI-NYTS 271
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
K G D K H A+ AK +LG++ + E LK E
Sbjct: 272 KVKG-DVK--------HTSADTSKAKKLLGYQPQVSFKEGLKREVE 308
>gi|340757124|ref|ZP_08693727.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium varium ATCC
27725]
gi|251834392|gb|EES62955.1| UDP-N-acetylglucosamine 4-epimerase [Fusobacterium varium ATCC
27725]
Length = 347
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----KPDAG---HVQVE 69
N R + + K G+K+F+ SS+ +Y + P E D+V P A +V
Sbjct: 129 NVRGTMNILEICKKLGIKKFIQASSSSVYGNNKKAPFRETDIVDFAISPYAATKKSCEVI 188
Query: 70 KYISENFSNWASFRPQYMIGSGNNK--DCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVR 126
++ N F+ ++ G + D + F + I+ + +P G G F + +V+
Sbjct: 189 GHVYHKLYNIDMFQLRFFTVYGERQRPDLAIYKFTKMILEGKEIPFYGDGNTFRDYTYVK 248
Query: 127 DLSSMLTLAVENPEAASS--NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
D+ +T +++ + S I NL V+L M ++ G+ V+I P G
Sbjct: 249 DIVQGITKSIDYLKNNSDVYEILNLGESHVVSLKEMVEVIENTLGIKVKINKL-PMQMG- 306
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 220
D +K YA+ AK ++G+ +T + +
Sbjct: 307 DVEKT--------YADINKAKILIGYNPSTKFEDGI 334
>gi|448423482|ref|ZP_21582011.1| NAD-dependent epimerase/dehydratase [Halorubrum terrestre JCM
10247]
gi|445683319|gb|ELZ35718.1| NAD-dependent epimerase/dehydratase [Halorubrum terrestre JCM
10247]
Length = 330
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 24/221 (10%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS----------- 81
V +++ISS Y A+E P EG+ Q E + N +
Sbjct: 93 VDGYVYISSGSSYA-AEEIPKREGETPLEPCTDEQAVDDDHETYGNRKAEGDRAVFAAAE 151
Query: 82 -------FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
RP + G + + +++ DR++ V +PG G + A+V D++S L +
Sbjct: 152 AGVAAMAVRPCIVYGPHDYTERLDYWIDRVLTHDRVVVPGDGQNLWHRAYVEDVASALRV 211
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY--DPKAAGIDAKKAFPF 192
E E ++ +N+ RA+TL + A AG+ E+V D AAG F
Sbjct: 212 VAERGEPGAA--YNVGDRRALTLRETLETIADVAGVDCELVTASDDALAAGGLEPDDFTL 269
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+ + A LGW ST + E + EE+ + RD
Sbjct: 270 YREYPHLLDTCALADLGWESTP-VDEAMARTVEEHRESDRD 309
>gi|343084239|ref|YP_004773534.1| NAD-dependent epimerase/dehydratase [Cyclobacterium marinum DSM
745]
gi|342352773|gb|AEL25303.1| NAD-dependent epimerase/dehydratase [Cyclobacterium marinum DSM
745]
Length = 317
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 36/222 (16%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFSNWASF- 82
A + +K FL S ++ +++ P E KP + +E Y+ +F + F
Sbjct: 92 ALNGKIKHFLHCGSMWVHGHSEQVPTTENQKRKPFGEYGIDKANIEAYL-HSFHQESGFP 150
Query: 83 ----RPQYMIGSG-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
P +++G G N + E F R+ + V IP GM+ + H D++
Sbjct: 151 VTILHPGHIVGPGWLPVNPAGNFNPE--VFVRLAKGEVVQIPNLGMETVHHVHADDVAQA 208
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-------LPVEIVHYDPKAAGI 184
++EN + A F++VS++A+TL G A+ A+ G LP E ++ +
Sbjct: 209 FVKSIENRDYAIGESFHVVSEQALTLRGFAEAMAEKFGQVANLQFLPWET--WEKTVSST 266
Query: 185 DAKKAFPFRNMHFYAEPRA----AKDILGWRSTTNLPEDLKE 222
D + F H P AKD+LG++ + E ++E
Sbjct: 267 DKE----FTWDHIAHSPCGSISKAKDLLGYQPQYSSLEAVQE 304
>gi|282936064|gb|ADB04289.1| putative sugar dehydratase [bacterium enrichment culture clone N47]
gi|308272789|emb|CBX29393.1| hypothetical protein N47_J03740 [uncultured Desulfobacterium sp.]
Length = 323
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 27/221 (12%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW--------------- 79
+++IS+ IY+ P V D K A ++ Y F+ W
Sbjct: 107 HYIYISTTSIYQNTRILP-VSEDAPKLSAPQPELGDYADYAFNKWLCELRLQIDCPKRGI 165
Query: 80 --ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
RP + G N E +FFD I +PV IP + + N +V DLS ++ +
Sbjct: 166 AYTCLRPAIIYGPYNYAPRETYFFDLIYHSKPVIIPRNDLPLFNFVYVVDLSKVIQKCLG 225
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA---FPFRN 194
N A FN+ S++ ++ + ++ + + I + I+ ++ FP +
Sbjct: 226 N-HAVFDQAFNVCSEQLISYQRLMEVFEEVCSKKISIEMLSVRE--IEKRQIPLPFPLDS 282
Query: 195 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 235
Y+ + + +LG+ S T + +K + EY K+ +D K
Sbjct: 283 HLIYSGTKLQR-LLGF-SYTPIENGMKSTY-EYYKLVQDAK 320
>gi|448432407|ref|ZP_21585543.1| NAD-dependent epimerase/dehydratase [Halorubrum tebenquichense DSM
14210]
gi|445687291|gb|ELZ39583.1| NAD-dependent epimerase/dehydratase [Halorubrum tebenquichense DSM
14210]
Length = 330
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 24/221 (10%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-------------- 78
V +++ISS Y A+E P EG+ Q E + N
Sbjct: 93 VDGYVYISSGSSYA-AEEIPKREGETPLEPCTDEQATDDSHETYGNRKAEGDRAVFAAAE 151
Query: 79 ----WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ RP + G + + +++ DR++ + +PG G + A+V D++S L +
Sbjct: 152 EGVAAMAVRPCIVYGPHDYTERLDYWIDRVLTHDRLVVPGDGQNLWHRAYVEDVASALRI 211
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY--DPKAAGIDAKKAFPF 192
E E ++ +N+ RA+TL + A AA + EIV D AAG F
Sbjct: 212 VAERGEPGAA--YNVGDRRALTLRETLETVADAAEVDCEIVAASDDALAAGGLEPDDFTL 269
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+ + A LGW ST + E ++ EE+ RD
Sbjct: 270 YREYPHLLDTCALADLGWESTP-VDEAMERTVEEHRASDRD 309
>gi|293115818|ref|ZP_05793133.2| putative dTDP-glucose 4,6-dehydratase [Butyrivibrio crossotus DSM
2876]
gi|292808328|gb|EFF67533.1| putative dTDP-glucose 4,6-dehydratase [Butyrivibrio crossotus DSM
2876]
Length = 316
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 15/214 (7%)
Query: 24 VADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISEN 75
+ D+ + G Q++ ISS+ +Y P +E + + EK + E
Sbjct: 89 IIDFVRELGSFDQYIMISSSAVYPEYGVQPFLEESEKSENKFWGSYGTDKIAAEKALLER 148
Query: 76 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
+ RP Y+ G NN E + FD + R +P G HV+DL ++ +
Sbjct: 149 VKDAYILRPPYLYGPMNNVYREAFVFDCALADRKFYLPKDGSMKLQFFHVKDLCRLMEVI 208
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 195
++ + I N+ + AV++ C ++ G + V+ I+ + F F N
Sbjct: 209 IK--DKPQERILNVGNVEAVSIKDWVTKCYESLGKIPDFVNV---YEDIEQRNYFSFYNY 263
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+Y + I + T +L + L++ + Y++
Sbjct: 264 EYYLDVSRQNKI--YPETISLEDGLRDSVKWYLE 295
>gi|456386837|gb|EMF52373.1| NAD-dependent epimerase/dehydratase [Streptomyces bottropensis ATCC
25435]
Length = 349
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 30/165 (18%)
Query: 29 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVK--PDAGHVQVEKYISENFSN-------- 78
++ +++ ++SS+ +++ ++ EGD ++ P A +K E ++
Sbjct: 110 RTGVLRKVTYVSSSMVFEKVEDGKIAEGDELEFPPPATAYGFQKLAVEYYAKAAWDQYAL 169
Query: 79 -WASFRPQYMIGSGNNK------DCEEW-----------FFDRIVRKR-PVPIPGSGMQF 119
W RP +G+G + D E F +R +R+ P I G G QF
Sbjct: 170 PWTIVRPFNCVGAGERRTPHGGADPGEQRPLVQGHVIPDFAERALRRETPFRILGDGQQF 229
Query: 120 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 164
H RD+++ + LA+E EAA++ FNL T++ +A+L
Sbjct: 230 RTFTHARDMATGIVLAMEQ-EAATNEDFNLSGSYGCTIESLARLV 273
>gi|238062666|ref|ZP_04607375.1| NDP-glucose 4-epimerase [Micromonospora sp. ATCC 39149]
gi|237884477|gb|EEP73305.1| NDP-glucose 4-epimerase [Micromonospora sp. ATCC 39149]
Length = 342
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN---------WAS 81
+GV+ F F SS +Y + P + VV A + KY+ E + +
Sbjct: 108 TGVRFFCFASSVAVYGHGETP--MRESVVPVPADSYGLAKYLVERELEVTMRTQGLPFTA 165
Query: 82 FRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
FR + G N ++ FF++I+R P+ + G G Q +V D+ ++++ A
Sbjct: 166 FRMHNVYGEWQNMRDPYRNAVAIFFNQILRGEPITVYGDGGQVRAFTYVGDVVNVVSRAA 225
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
E EAA FN+ S T+ +A+ AAG+P + + P
Sbjct: 226 ET-EAAWGRAFNVGSSSTNTVLELAQAVRSAAGVPEHPIAHLPS 268
>gi|338729935|ref|YP_004659327.1| NAD-dependent epimerase/dehydratase [Thermotoga thermarum DSM 5069]
gi|335364286|gb|AEH50231.1| NAD-dependent epimerase/dehydratase [Thermotoga thermarum DSM 5069]
Length = 307
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 32 GVKQFLFISSAG-IYK---PADEPPHVEGDVVKP-----DAGHVQVEKYISENFSNWASF 82
GVK+F+F S+ G IY P P VE + P + + +E + E ++ S
Sbjct: 109 GVKKFIFSSTGGAIYGEDVPIPTPETVEPRPISPYGIAKRSAEMYLEFFKREYNLDYVSL 168
Query: 83 RPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
R + G + + E F R+++ V I G G + +V+D+ LA+++
Sbjct: 169 RYGNVYGPRQDPNGEAGVVAIFTARMLKNEDVIIFGDGEYVRDYVYVKDVVQANLLAMKD 228
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 198
S ++N+ + T++ + K+ A+ G + V+ P+ D +K+
Sbjct: 229 ---GVSGVYNIGTGIGTTVNQLFKMLARLTGYQKQPVYAPPRKG--DLRKSI-------- 275
Query: 199 AEPRAAKDILGWRSTTNLPEDLKERFEEY 227
+P AK+ LGW TNL E L E +
Sbjct: 276 LDPTKAKNELGWSPQTNLEEGLALTIEYF 304
>gi|73667591|ref|YP_303606.1| GDP-fucose synthetase [Methanosarcina barkeri str. Fusaro]
gi|72394753|gb|AAZ69026.1| GDP-fucose synthetase [Methanosarcina barkeri str. Fusaro]
Length = 312
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPD--------A 63
N ++ + A GV++ LF+ S+ IY +P E + G + + + A
Sbjct: 84 NLMIESNIIHAAYKCGVEKLLFLGSSCIYPKLAPQPLKEEYLLTGSLEETNEAYAIAKIA 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW---------FFDRIVRKRP-VPIP 113
G + Y + +N+ S P + G +N D E F + V +P V +
Sbjct: 144 GIRLCKHYNHQYGTNFISVMPTNLYGPNDNFDLETSHVMPALIRKFHEAKVNNKPEVVVW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF-NLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G HV D++ +EN + + F N+ VT+ + KL + G
Sbjct: 204 GTGKPLREFMHVDDMADACVFLMENYDFSEVGEFVNIGVGEDVTISELVKLIKEIVGFEG 263
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
+I + K G PR D+ LGW++ +L + +KE +E Y
Sbjct: 264 KINYDTSKPDGT----------------PRKLMDVSRLNGLGWKARMSLKDGIKETYEWY 307
>gi|308511317|ref|XP_003117841.1| hypothetical protein CRE_00931 [Caenorhabditis remanei]
gi|308238487|gb|EFO82439.1| hypothetical protein CRE_00931 [Caenorhabditis remanei]
Length = 342
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 17/211 (8%)
Query: 32 GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVEKYISENF--SNWASFRPQYM 87
GVK+ + IS+ +Y + D P E + K E S W S++ Y+
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187
Query: 88 IGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
+ NN +++ K +P P+ G G+ + +V D S +T
Sbjct: 188 MVRMNNVYGPRQIHTKLIPKFTKLALDGQPYPLMGDGLHTRSWMYVEDCSEAITRVAL-- 245
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
E I+N+ +D +T + K+ ++++ +P A P+ + +Y
Sbjct: 246 EGKLGEIYNIGTDFEMTNIELTKMIHSTVS---KLLNREPTAPTFAPIPDRPYHDRRYYI 302
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
+ ++ +GW+ TT E L + E YVK+
Sbjct: 303 DFSKIRNAMGWQCTTPFSEGLMKTIEYYVKL 333
>gi|189426414|ref|YP_001953591.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
gi|189422673|gb|ACD97071.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
Length = 335
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 94 KDCEEWFFD----RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
KD + F I+ +PV + G G Q + +V D+ + L + +AA+ IFNL
Sbjct: 190 KDARQTFLGIWIRNILTGQPVLVFGDGRQVRDFNYVDDVVEAMLLCAAS-DAANGEIFNL 248
Query: 150 VSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
+D L A+L QAAG +V + P ID +YA+ K L
Sbjct: 249 GADDPANLQDTAQLLVQAAGQGSFALVPFPPDRKAIDIGD--------YYADYGKIKATL 300
Query: 209 GWRSTTNLPEDLKERFEEY 227
GW+ L E L+ Y
Sbjct: 301 GWQPAVALQEGLQRTLAYY 319
>gi|108760627|ref|YP_631701.1| UDP-glucose 4-epimerase [Myxococcus xanthus DK 1622]
gi|108464507|gb|ABF89692.1| UDP-glucose 4-epimerase [Myxococcus xanthus DK 1622]
Length = 314
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 90/229 (39%), Gaps = 26/229 (11%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKP--------D 62
F + N R + + A+ SGVK+ +F S+ G IY D P E +P
Sbjct: 87 FDADVNIRGMLNLLEAARVSGVKKVIFSSTGGAIYGEQDVFPAPESHPTRPISPYGVSKA 146
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQ 118
+G + + Y ++ + + R + G N E F R++ + I G G Q
Sbjct: 147 SGELYLGYYRAQYGLPYVALRYANVYGPRQNPHGEAGVVAIFSQRLIAGQGCTIFGEGKQ 206
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
+ D++ LA EN + NI V ++ + L A+AAG V + H
Sbjct: 207 TRDFVFGPDVARANRLAFENDYVGAINIGTGVE---TDINRLYALLAEAAGSSVSVAHAP 263
Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
K P M + A+ +LGW + ++ E L+ E +
Sbjct: 264 GK----------PGEQMRSCVDNALARKVLGWEPSVDVREGLRRTLEYF 302
>gi|448473282|ref|ZP_21601424.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
gi|445818794|gb|EMA68643.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
Length = 330
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E N + RP + G + + +++ DR++ V +PG G A+V D++S L
Sbjct: 150 AEAGVNAVAVRPCIVYGPHDYTERLDYWIDRVLSYDRVVVPGDGQNVWQRAYVEDVASAL 209
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV--HYDPKAAGIDAKKAF 190
+A E E ++ +N+ RA+TL + A AA E+V D AAG F
Sbjct: 210 RIAAERGEPGAA--YNVGDRRALTLAETVETIADAADTDCEVVPASADALAAGDLTPDEF 267
Query: 191 PFRNMHFYAEPRAAKDILGWRST 213
+ + A LGW ST
Sbjct: 268 VLYREYPHLLDTCALADLGWEST 290
>gi|384539258|ref|YP_005723342.1| nucleotide sugar epimerase / oxidoreductase [Sinorhizobium meliloti
SM11]
gi|336037911|gb|AEH83841.1| nucleotide sugar epimerase / oxidoreductase [Sinorhizobium meliloti
SM11]
Length = 324
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
+ +RI RP I G G Q + HVRD++ LA ++ + +FN+ S +L
Sbjct: 196 WMERIAAGRPPIILGDGTQTLDFVHVRDIARANLLAAKS--GVTDEVFNVASGTETSLKD 253
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A+L A+ G +E Y+P A+K A+ R A+ +LG+++ +L E
Sbjct: 254 LAQLLARIMGSSIE-PQYEP------ARKVNAV--TRRLADMRKAERLLGFKTEISLEEG 304
Query: 220 LKE 222
L+E
Sbjct: 305 LRE 307
>gi|448507278|ref|ZP_21614896.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
9100]
gi|448523824|ref|ZP_21619011.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
10118]
gi|445698647|gb|ELZ50687.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
9100]
gi|445700897|gb|ELZ52888.1| NAD-dependent epimerase/dehydratase [Halorubrum distributum JCM
10118]
Length = 330
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 24/221 (10%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS----------- 81
V +++ISS Y A+E P EG+ Q E + N +
Sbjct: 93 VDGYVYISSGSSYA-AEEIPKREGETPLEPCTDEQAVDDDHETYGNRKAEGDRAVFAAAE 151
Query: 82 -------FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
RP + G + + +++ DR++ V +PG G + A+V D++S L +
Sbjct: 152 AGVAAMAVRPCIVYGPHDYTERLDYWIDRVLTHDRVVVPGDGQNLWHRAYVEDVASALRV 211
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY--DPKAAGIDAKKAFPF 192
E E ++ +N+ RA+TL + A AG+ E V D AAG F
Sbjct: 212 VAERGEPGTA--YNVGDRRALTLRETLETIADVAGVDCEFVTASDDALAAGGLEPDDFTL 269
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+ + A LGW ST + E + EE+ + RD
Sbjct: 270 YREYPHLLDTCALADLGWESTP-VDEAMARTVEEHRESDRD 309
>gi|20094161|ref|NP_614008.1| nucleoside-diphosphate-sugar epimerase [Methanopyrus kandleri AV19]
gi|19887177|gb|AAM01938.1| Nucleoside-diphosphate-sugar epimerase [Methanopyrus kandleri AV19]
Length = 309
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 83/211 (39%), Gaps = 27/211 (12%)
Query: 28 AKSSGVKQFLFISSAGI------YKPADE--PPH-VEGDVVKPDAGHVQVEKYISENFSN 78
A V++F++ SS G Y P DE P + V AG V Y +
Sbjct: 106 AAEHDVERFVYASSGGAVYGEPEYLPVDEEHPTRPISNYGVSKLAGEYYVRVYAERDGFE 165
Query: 79 WASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ R + G + E F R R P+ I G G Q + V D++ +
Sbjct: 166 YVILRYANVYGPRQDPRGEAGVIPIFLLRAARGEPLTIFGDGEQTRDFVFVEDVARVTAE 225
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 194
AVE ++N+ + R +++ + G+ VE+V+ DP+ P
Sbjct: 226 AVER----GDGVYNIGTGRETSVNDIVNAVKAVTGVDVEVVYEDPR----------PGEV 271
Query: 195 MHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
Y +P A++ LG+ +L E ++ +E
Sbjct: 272 RRIYLDPSRAREELGFEPRVDLEEGIERTWE 302
>gi|441150189|ref|ZP_20965455.1| NAD-dependent epimerase/dehydratase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440619336|gb|ELQ82386.1| NAD-dependent epimerase/dehydratase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 322
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 19/166 (11%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVK-PDAGH-------------VQVEKYISENFSN 78
V ++LFISS +Y+ P + D + P H V E ++ +
Sbjct: 88 VGRYLFISSHAVYERTGLAPGSDEDTPRRPPVRHTEELSEATYGPLKVACEDDVTARYGA 147
Query: 79 WASF-RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
A+ RP + G ++ D ++ R R V +PG Q + RDL+ ++ +
Sbjct: 148 RATIVRPGKVAGPHDSMDTFTYWVRRAARGGRVALPGDPEQPVQVVDSRDLARLVVRLIT 207
Query: 138 NPEAASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
+ + F V TL G+ + CA+AAG VEIV P+ A
Sbjct: 208 DDRPGA---FQAVGPAEPTTLGGLIRTCARAAGTEVEIVPVPPEGA 250
>gi|335043538|ref|ZP_08536565.1| nucleoside-diphosphate-sugar epimerase [Methylophaga
aminisulfidivorans MP]
gi|333790152|gb|EGL56034.1| nucleoside-diphosphate-sugar epimerase [Methylophaga
aminisulfidivorans MP]
Length = 316
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGI--YKPADE-PPHVEGDVVKPDAGHVQVEKYIS 73
N L R +A A +GVK F+FISS + + +D P E D+ P+ + K +
Sbjct: 92 NVELTRVLASQAAIAGVKHFIFISSIKVNGEETSDTLKPFCETDIPLPEDEYAH-SKLAA 150
Query: 74 ENF-------SNWAS--FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ-FTNIA 123
EN SN A RP + G G + E+ ++VRK +P+P + M+ + ++
Sbjct: 151 ENHLKTICHASNMAYTIIRPPLVYGPGVKGNFEKLI--KLVRK-GLPLPFAKMKNWRSVL 207
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDR-AVTLDGMAKLCAQAAGLPVEIVHYDPKA- 181
+ +L+ + +ENP+A + L++D+ V+ G+ ++A + + Y PK
Sbjct: 208 AIDNLTDFIWTCIENPKAKNETF--LIADKDDVSTTGLLIAISEAYKKSLRL-FYIPKTP 264
Query: 182 -----AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
I K + AK +LGW ++LP L++ E
Sbjct: 265 LRWLLVCIGKKNIYRKLYSCLIVRKDKAKVLLGWEPISDLPSQLRKMVE 313
>gi|290954895|ref|YP_003486077.1| oxidoreductase [Streptomyces scabiei 87.22]
gi|260644421|emb|CBG67506.1| putative oxidoreductase [Streptomyces scabiei 87.22]
Length = 323
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 19/149 (12%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI------SENFSNW---ASFR 83
V L + Y P+D+ P + P G ++K + +E S S
Sbjct: 97 VGHLLHCGTLWRYGPSDKLP-ISETTGTPPVGEYGIQKDLIARMLKAETASGGLVTTSLH 155
Query: 84 PQYMIGSG-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
P +++G G N D W+ + RP+ IPG G++ + H D++ AV
Sbjct: 156 PGHIVGPGWDPVNPLGNNDPSVWYA--LSAGRPLRIPGIGVEPMHHVHADDVAQSFERAV 213
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCA 165
E+ EAA+ FN+V+ A+ + G A++ A
Sbjct: 214 EHREAAAGEDFNVVAPTALNVRGYARIAA 242
>gi|126433566|ref|YP_001069257.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. JLS]
gi|126233366|gb|ABN96766.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. JLS]
Length = 324
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 22/229 (9%)
Query: 7 KFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
F A R +N QR + +S+ +++F++ SS+ +Y A+ P +E D +P + +
Sbjct: 95 SFDAYLR-DNILASQRLLEAARRSTSLRRFVYASSSSVYGDAERYPTLETDTPQPRSPY- 152
Query: 67 QVEKYISENFSNW---------ASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSG 116
V K +E+ S R + G D F R + RP+ I GSG
Sbjct: 153 GVTKLAAEHLMGLYAQNFGVPTLSLRYFTVFGPRQRPDMAFTRFIARTLAGRPIEIFGSG 212
Query: 117 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
Q + V D+ S A ++N+ +VT++ + + P+ + H
Sbjct: 213 EQIRDFTFVDDVVSANLAAATAAGVLPGTVYNISGGASVTVNEILATLEEILDGPI-LTH 271
Query: 177 YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
AG D FR AA+ +GW T +L E L+ + E
Sbjct: 272 RAETVAG-DV-----FRTG---GSNEAARRGIGWEPTVSLHEGLRRQVE 311
>gi|288916919|ref|ZP_06411291.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f]
gi|288351628|gb|EFC85833.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f]
Length = 303
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 85/213 (39%), Gaps = 33/213 (15%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 83
+ + A + + + LF+S+ GI+ D P + E I + +W R
Sbjct: 84 IVETALQAHLTRALFVSTTGIFTALDPPSKQT---------RLAAENTIRTSGLDWTIIR 134
Query: 84 PQYMIGSGNNKDCEEWFFDRIVR--KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
P + G ++++ + + R P+P+PG G Q HV DL+ +L AVE +
Sbjct: 135 PTMIYGGPDDRNMAR-LLNLLQRWPMLPIPLPGGGHQLHQPIHVDDLAELLVRAVEL-DV 192
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAG-----LPVEIVHYDPKAAGIDAKKAFPFRNMH 196
+ A+TL + + AAG LP+ + P AA I A + H
Sbjct: 193 TIGRTYTAAGPAALTLRQVVEQAGAAAGRRPTCLPIPV---RPVAALIGAYE-------H 242
Query: 197 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
A PR ++ L ED E+ V+
Sbjct: 243 RSARPRLKRE-----QIARLTEDKAFSIEDAVR 270
>gi|406927147|gb|EKD63223.1| hypothetical protein ACD_51C00316G0018 [uncultured bacterium]
Length = 344
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRPQYMI--- 88
V++F+ IS++ +Y A++ E ++ P + + + +S W ++ MI
Sbjct: 120 VERFIHISTSEVYGTAEKELMDEEHILNPRSPYAGAKAGADRLVYSYWCTYDLPVMIIRP 179
Query: 89 --GSGNNKDCEEW---FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 143
G N+ E+ F ++ P+ + G G+ + +V+D + A+ P+ +S
Sbjct: 180 FNNYGPNQHLEKMMPRFITSALKDEPLTVHGQGLAERDWLYVQDHCEAIDQALNLPDFSS 239
Query: 144 --SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
+ N+ ++RAV++ +AK+ + G P ++ Y G + H +
Sbjct: 240 IRQQVINIGTERAVSVMDIAKIILKQLGKPENMIKYIFDRPGQVER--------HISSTE 291
Query: 202 RAAKDILGWRSTTNLPEDLKERFEEY 227
+A K +L W++ TNL E + + + Y
Sbjct: 292 KAEK-LLNWKAKTNLEEGIIKTIDWY 316
>gi|222481362|ref|YP_002567598.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
gi|222454738|gb|ACM59001.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC
49239]
Length = 315
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 18/187 (9%)
Query: 26 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFS 77
D A +G + +F SSA +Y P E D P AG V Y
Sbjct: 115 DLATDAGAR-VVFASSAAVYGDPSSVPIGETDAKDPREPYGVSKLAGDHLVRGYADWKDL 173
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
+ + R + G G F +++ R P+ + G G Q + HV D+ + A
Sbjct: 174 DTVALRLFNVYGPGQTGGVVPSFLEQVQRGEPLVVHGDGTQTRDFVHVDDVVRAMVAAAR 233
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI-----DAKKAFPF 192
A+ FN+ + ++ +A + AA + V++VH DP+ A + D KA
Sbjct: 234 TD--ATGESFNVGTGDVTSIHELATVVRDAAPVTVDVVHDDPRPADVPESQADTTKA--R 289
Query: 193 RNMHFYA 199
R++ F A
Sbjct: 290 RDLEFEA 296
>gi|315649268|ref|ZP_07902357.1| NAD-dependent epimerase/dehydratase [Paenibacillus vortex V453]
gi|315275256|gb|EFU38625.1| NAD-dependent epimerase/dehydratase [Paenibacillus vortex V453]
Length = 323
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 92/242 (38%), Gaps = 46/242 (19%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N ++Q V D + GVK+ LF+ S IY K A +P P E +
Sbjct: 89 DNLQIQNNVIDLSYRYGVKKLLFLGSTCIYPKLAPQPMKEEYFMTGTLEPTNEAYAIAKI 148
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG + Y + + + S P + G +N D E ++RK + V I
Sbjct: 149 AGITMCQSYNRQYGTRFISAMPTNLYGPNDNYDLETSHVLPALLRKIHEAKENGRQEVEI 208
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
GSG H DL+ + E ++I N+ + V++ +A+ A G
Sbjct: 209 WGSGQPKREFLHADDLADACVFLMNQYEG--NDIVNIGCGKDVSIRELAESIASIIGYEG 266
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
+ V+ K G PR D+ LGWR++ L L ++ +
Sbjct: 267 QFVYNTSKPDGT----------------PRKLVDVSRLTELGWRASITLEHGLARTYDHF 310
Query: 228 VK 229
++
Sbjct: 311 LE 312
>gi|406919632|gb|EKD57873.1| hypothetical protein ACD_57C00116G0001 [uncultured bacterium]
Length = 302
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 25/225 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEK 70
+NN + + + +GVK+ +F SSA +Y D P E V+PD A +E
Sbjct: 87 DNNVIGTIGLLESMRKNGVKKIIFSSSACVYGTPDTLPIKEDAPVRPDNPYGASKAAIEA 146
Query: 71 YISENFSNW----ASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNI 122
++ +N+ R G G + E F + K+P+P+ +G Q +
Sbjct: 147 FLQAYNANFNFDVTILRYFNPYGPGEMHEPETHAIPNFIKAALSKKPIPLYWNGAQIRDF 206
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
++ DL + VE NIFN+ +++ V + + G V I +
Sbjct: 207 IYIEDL---VRAHVEVINQTGLNIFNIGTEKGVVVKEVLDEIFSIIGYKVPIDDLGKRPG 263
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
+ A YA K +GW++ +L E LK+ Y
Sbjct: 264 DVQAN----------YASSEKLKKAVGWQAKVDLKEGLKKTIGFY 298
>gi|365155762|ref|ZP_09352114.1| hypothetical protein HMPREF1015_02168 [Bacillus smithii 7_3_47FAA]
gi|363628044|gb|EHL78863.1| hypothetical protein HMPREF1015_02168 [Bacillus smithii 7_3_47FAA]
Length = 301
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS------ 77
+ + + + VK+ +F S++G+Y + E D+ P + H + K +E++
Sbjct: 99 ILEACREASVKKVIFASTSGVYGNLQKDLISEKDLTMPISYH-GLSKLTAESYIRLFHQL 157
Query: 78 ---NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
++ R + G + E F DRI + P+ I G G Q + +V+D+
Sbjct: 158 YGLSYTILRYGNVYGPRQSAKGEGGVIAIFLDRIKKGMPLMIHGDGEQTRDFVYVKDIVR 217
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
AVE + + + + ++++++ + K+ Q G P+E ++ + I
Sbjct: 218 ANIAAVEKGDQET---IQVSTGKSISINHLVKMLTQIYGSPIETIYTHARTGDIK----- 269
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
H + + A+ +L W ++ L E +
Sbjct: 270 -----HSCLDNKKARQLLQWNPQVDIFNGLTETY 298
>gi|108804076|ref|YP_644013.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM
9941]
gi|108765319|gb|ABG04201.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM
9941]
Length = 331
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 75/196 (38%), Gaps = 18/196 (9%)
Query: 36 FLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWA------SFRPQ 85
F+F SS G EPP EG +P AG + E Y S + + F
Sbjct: 130 FVFASS-GAAAGEVEPPIHEGVCPRPVSPYGAGKLAGEAYCSAYWRTYGLETVALRFGNV 188
Query: 86 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 145
Y GSG+ F R R + I G G Q + ++ DL L LA
Sbjct: 189 YGPGSGHKNSVVARFIRRAARGEVLEIYGDGTQTRDFIYIDDLVRALRLAA-TAGGVGGE 247
Query: 146 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 205
+F + + ++ + +L LPV + K ++ P YA+ A+
Sbjct: 248 VFQIATGSETSVGEVVELL-----LPV-LAAAGIKGVRVERASPRPGDVARNYADTSKAR 301
Query: 206 DILGWRSTTNLPEDLK 221
+LGWR+ L E L+
Sbjct: 302 RLLGWRAEVGLEEGLR 317
>gi|453050090|gb|EME97644.1| hypothetical protein H340_25532 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 331
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 91/238 (38%), Gaps = 36/238 (15%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPD------- 62
+N R+Q + A ++GV + LF+ S+ IY +P E + G + + +
Sbjct: 92 TDNLRIQTNLFTAAHAAGVDRLLFLGSSCIYPKHSPQPIPESALLTGPLEETNDAYAIAK 151
Query: 63 -AGHVQVEKYISENFSNWASFRPQYMIGSGNN-KDCEEWFFDRIVRK---------RPVP 111
AG V V Y + W S P + G G+N ++R+ V
Sbjct: 152 IAGVVAVRSYRRQYGRRWISLMPTNLYGPGDNFHPTRSHVLPALIRRFHEAARTGAEEVT 211
Query: 112 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
+ G+G HV DL++ + + + S N+ + R VT+ +A++ +A G
Sbjct: 212 VWGTGAPRREFLHVDDLAAACLHLLRHYDGPSP--VNVGTGRDVTIAELARMVVEAVGYT 269
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
I +DP +K + GWR LP+ L+ Y +
Sbjct: 270 GRI-RWDPSRPDGTPRKLLDVSRLF----------ATGWRPAIGLPDGLRSTVRWYAE 316
>gi|335436236|ref|ZP_08559036.1| NAD-dependent epimerase/dehydratase [Halorhabdus tiamatea SARL4B]
gi|334897918|gb|EGM36042.1| NAD-dependent epimerase/dehydratase [Halorhabdus tiamatea SARL4B]
Length = 325
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E+ N + RP + G + + +++ RI + +PG G+ A+V D++S L
Sbjct: 148 AEDGVNAMAVRPTVVYGPHDYTERFDYWLARIDTYDRIVVPGDGLSLWQFAYVEDVASAL 207
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAF 190
+ E EA + +N+ A TL +L A A PV V AA + A + F
Sbjct: 208 RIVAERGEAGEA--YNVGDRHAPTLGQWVELIADAMDRPVHAVGASANELAAAVLAPEDF 265
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
P + A LGW ST E L+ EE+
Sbjct: 266 PLYRDQPHLLSTAKLHDLGWDSTPQ-EEALQATVEEH 301
>gi|405375675|ref|ZP_11029701.1| UDP-glucose 4-epimerase [Chondromyces apiculatus DSM 436]
gi|397086039|gb|EJJ17183.1| UDP-glucose 4-epimerase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 314
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 89/229 (38%), Gaps = 26/229 (11%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKP--------D 62
F + N R + + A+ SGVK+ +F S+ G IY D P E +P
Sbjct: 87 FDADVNIRGMLNLLEAARVSGVKKVIFSSTGGAIYGEQDVFPAPENHPTRPISPYGVSKA 146
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQ 118
AG + + Y ++ + + R + G N E F R++ + I G G Q
Sbjct: 147 AGELYLGYYRAQYGLPYVALRYANVYGPRQNPHGEAGVVAIFSQRLIAGQGCTIYGEGKQ 206
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
+ D++ LA E + NI V ++ + L A+AAG V + H
Sbjct: 207 TRDFVFGPDVARANRLAFEKDYVGAINIGTGVE---TDINRLYALLAEAAGSTVPVTHAP 263
Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
K P M + AK +LGW + ++ E L+ E +
Sbjct: 264 GK----------PGEQMRSCVDNALAKKVLGWEPSADVREGLRRTIEYF 302
>gi|218296664|ref|ZP_03497382.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23]
gi|218242977|gb|EED09510.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23]
Length = 317
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 90/236 (38%), Gaps = 46/236 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N +Q V D A GVK+ LF+ S+ IY K A +P P E V A
Sbjct: 84 NLLIQTNVIDAAYRYGVKKLLFLGSSCIYPKYAPQPMKEEYLLTGPLEPTNEAYAVAKIA 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKR-PVPIP 113
G V+ Y + N S P + G G+N D E F + V R V +
Sbjct: 144 GIEMVQAYRRQYGFNGISLMPTNLYGPGDNFDLETSHVIPALLRKFHEAKVSGRWEVVVW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
G+G HV DL+ + + + I N+ +++ +A+L A+ G +
Sbjct: 204 GTGTPRREFLHVDDLADAALFLMRHYDG--EEIVNVGVGEDISIRELAELIAKVVGFRGK 261
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERF 224
IV+ K G PR D+ +GWR L E L++ +
Sbjct: 262 IVYDTSKPDGT----------------PRKLLDVSRLFSMGWRPRIPLEEGLRQTY 301
>gi|170780544|ref|YP_001708876.1| lipoprotein [Clavibacter michiganensis subsp. sepedonicus]
gi|169155112|emb|CAQ00212.1| conserved putative lipoprotein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 352
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 34 KQFLFISSAGIY-KPADEPPHVEGDV-VKPDAGHVQVEKYISENFSNWAS--------FR 83
+QF+ ISSA IY KPA + P E + P + + + + + F + + R
Sbjct: 105 RQFVAISSASIYRKPALQTPITESTLRANPFLSYARDKIAMEDAFLRYHAASGFPVVIVR 164
Query: 84 PQYMIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
P + + +W DRI R V +PG G + H D + L + + E A
Sbjct: 165 PSHTYDEASPPLAGDWTVVDRIARGDEVVVPGDGTSLWTLTHADDFAVGL-VGILGDERA 223
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
++ S +T D + +L A A G+ +VH
Sbjct: 224 VGEALHITSGDVMTWDRIRRLVADALGVEARLVH 257
>gi|392383819|ref|YP_005033015.1| putative NAD-dependent epimerase/dehydratasen; putative UDP-glucose
4-epimerase [Azospirillum brasilense Sp245]
gi|356880534|emb|CCD01496.1| putative NAD-dependent epimerase/dehydratasen; putative UDP-glucose
4-epimerase [Azospirillum brasilense Sp245]
Length = 335
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 78/211 (36%), Gaps = 31/211 (14%)
Query: 32 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQY----- 86
GVK+ ++ SS Y A+ P E P + V KY E + + + RP
Sbjct: 107 GVKRLIYASSMSAYGNAEVVPTPEDTPCSP-VSYYGVTKYAGERYVHLTAARPDLPGALA 165
Query: 87 --------MIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
+ G D F I+R P+ I G G Q + + D+
Sbjct: 166 VTSFRMYNVYGPRQAVDNPYQGVLGIFLGNIIRGEPIRIYGDGKQTRDFVFIDDVVDAWV 225
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV--EIVHYDPKAAGIDAKKAFP 191
A++NP A+ IFNL S R ++ +A L A G V Y P+ P
Sbjct: 226 GALDNP-ASHGKIFNLGSGRQTSISELADLALGALGRTRADHPVLYHPER---------P 275
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
A+ A +LGW T L + L E
Sbjct: 276 GEQRSVQADVAYAGSVLGWTPRTRLEQGLAE 306
>gi|402493816|ref|ZP_10840565.1| GDP-fucose synthetase [Aquimarina agarilytica ZC1]
Length = 317
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 42/239 (17%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 76
N ++Q + D A +GV++F+F+ S+ IY P P ++ D + D+ E Y
Sbjct: 85 NMQIQNNLIDTALQAGVEKFIFLGSSCIY-PKLAPQPLKEDCLLTDSLEPTNEWYAIAKI 143
Query: 77 S--------------NWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
S ++ S P + G+ +N D + ++RK PV +
Sbjct: 144 SGVKSCEAIRKQFDKDYVSLMPTNLYGTHDNFDLKTSHVLPAMIRKFHEAKLNNHAPVNL 203
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 170
GSG V D+++ + A+EN PE +++N+ + +T+ +A+ + G
Sbjct: 204 WGSGTPMREFLFVDDMAAAVVFALENKLPE----HLYNIGTGEDLTIKALAETIQEVVGH 259
Query: 171 PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
IV K G +K MH LGW+ +L +++ + +++
Sbjct: 260 TGAIVWDSSKPDGT-PRKLMDISKMHE----------LGWKHQVDLTTGIRKTYNWFLE 307
>gi|67473445|ref|XP_652489.1| dTDP-D-glucose 4,6-dehydratase [Entamoeba histolytica HM-1:IMSS]
gi|56469346|gb|EAL47103.1| dTDP-D-glucose 4,6-dehydratase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705117|gb|EMD45233.1| dTDPD-glucose 4,6-dehydratase, putative [Entamoeba histolytica
KU27]
Length = 341
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE---K 70
T+NN + + +K++ +K+F+ +S+ +Y E ++ P + + +
Sbjct: 105 THNNIYGTHVLLEVSKANHIKRFIHVSTDEVYGQVIGNAATENSLLNPTNPYAATKAGAE 164
Query: 71 YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV--------RKRPVPIPGSGMQFTNI 122
+I+ +F + SF +I GNN F ++++ R + PI GSG + +
Sbjct: 165 FIARSF--YQSFGLPLIITRGNNVFGPHQFPEKLIPKFITLLDRGKNCPIHGSGEEKRSF 222
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
+V+D+ + + + + I+N+ + R ++ + +A +P E D +
Sbjct: 223 IYVQDVVNAFDVVLR--KGIVGQIYNIGTTREISNNEVAHALLDIFQVPKE--EQDSRIY 278
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
++ + F N Y+ + + LGWR+TT+ E LK+ E Y+
Sbjct: 279 HVE-NRCF---NDQRYSLDVSKLEKLGWRATTSFEEGLKKTVEWYL 320
>gi|448315235|ref|ZP_21504887.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
gi|445612312|gb|ELY66043.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
Length = 329
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
+ RP + G + + +++ DR+ R V +PG G + A+V D++S L L E +
Sbjct: 157 AVRPCIVYGPHDYTERLDFWIDRVNRFDRVVVPGDGTNLWHRAYVEDVASALRLVAERGD 216
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPFRNM-H 196
A + +N+ R TL+ +L A VE+V P+ A I+ +R H
Sbjct: 217 AGEA--YNVGDRRLATLEETLELIADVLDTTVEVVTAGPRELEAGDIEPADYVLYREYPH 274
Query: 197 FYAEPRAAKDILGWRST 213
A + A LGW ST
Sbjct: 275 VLATGKLAA--LGWEST 289
>gi|56476479|ref|YP_158068.1| sugar dehydratase [Aromatoleum aromaticum EbN1]
gi|56312522|emb|CAI07167.1| Sugar dehydratase [Aromatoleum aromaticum EbN1]
Length = 315
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 33 VKQFLFISSAGIY-----KPADE-PPHVEGDVVKPDAGHVQ---VEKYISENFSN----- 78
V+Q+L IS+ +Y +P DE P ++G +P+ G +K ++E +
Sbjct: 92 VRQYLLISTTTVYQQSAGRPVDENAPLLDGP--QPELGDYADYGYDKCLAERAARRECER 149
Query: 79 ----WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
RP + G N E +FFDR+ + PV IP N V D++ +L
Sbjct: 150 LGIALTVLRPAIIYGYYNYAPRETYFFDRLRNREPVVIPEPARSSFNFIWVVDMAHLLWR 209
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
+ +P FNL S AVT + + + G +E +
Sbjct: 210 CIGDPRVFGET-FNLASGEAVTHARIVEALGEIVGKTIETL 249
>gi|331007296|ref|ZP_08330497.1| UDP-glucose 4-epimerase [gamma proteobacterium IMCC1989]
gi|330418903|gb|EGG93368.1| UDP-glucose 4-epimerase [gamma proteobacterium IMCC1989]
Length = 315
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 28/224 (12%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKP----DAGHVQVEKYISENFS- 77
+A A ++GVK+F+FISS G+ + E D V P +Q EK + E
Sbjct: 93 LARQAAAAGVKRFVFISSIGVNGAFSCGSAFTEADSVNPYDFYTESKLQAEKGLLELVEL 152
Query: 78 ---NWASFRPQYMIGSGNNKDCEEWF--FDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSM 131
RP + G G C F R+V K VP+P GS + ++ + +L
Sbjct: 153 TGLEVVIVRPPLVYGPG----CPGMFSLLMRVV-KSGVPLPLGSLVNKRSMIALDNLVDF 207
Query: 132 LTLAVE--NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-------LPVEIVHYDPKAA 182
+ L V+ A++ +F + D +++ + K A+A G PV ++ +
Sbjct: 208 ILLCVDIKRSREAANQVFVISDDFDISIKDLLKKMAKAYGKHQCLVPFPVSLMMFTACLM 267
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 226
G K F +++ + AK +LGWR T + E L E +
Sbjct: 268 GQKVKAGKFFSDLN--VDCSKAKSLLGWRPVTTIDEQLSEMVRQ 309
>gi|408404923|ref|YP_006862906.1| UDP-glucose 4-epimerase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408365519|gb|AFU59249.1| putative UDP-glucose 4-epimerase [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 324
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 27/234 (11%)
Query: 11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHV 66
L + N + + ++ SGVK+F+F SSA +Y E E +P+ AG +
Sbjct: 92 LLVHDVNVNMTLHLLNYCVKSGVKRFIFASSAAVYGIL-ESKATEDMACRPNSPYGAGKL 150
Query: 67 QVEKYISENFSNWA--SFRPQYMIGSGNNKDCEEW------FFDRIVR-KRPVPIPGSGM 117
+E Y+ + + +Y G + ++ F ++++ +RPV I G G+
Sbjct: 151 AIEDYLHAYRRTYGLETVMLRYFNVYGPRQIYSDYSGVITIFINKLLEGERPV-IFGDGL 209
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH- 176
Q + HV D+ LA+++ AA +FN+ S RA + M K+ + G +I H
Sbjct: 210 QVRDFVHVSDIVQANMLAMDSA-AAVGEMFNVASGRATNILEMVKIIKKLMG-ATDIEHQ 267
Query: 177 YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
+ P G D K A + +LG+ + + LK E KI
Sbjct: 268 FAPPRPG-DMKLGL--------ASIDKIRAVLGYDPKIQIQQGLKGVIESISKI 312
>gi|284048368|ref|YP_003398707.1| NAD-dependent epimerase/dehydratase [Acidaminococcus fermentans DSM
20731]
gi|283952589|gb|ADB47392.1| NAD-dependent epimerase/dehydratase [Acidaminococcus fermentans DSM
20731]
Length = 305
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 18/169 (10%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-- 81
V + + SGV+Q +F SSA IY P +E +V P + + + K + E++ S
Sbjct: 101 VLEGCRKSGVEQIIFSSSAAIYGDNQNLPLLETEVPAPTSFY-GLSKAVGEDYIRLYSRC 159
Query: 82 FRPQYMI-----------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
F +++I G F +I RK PV + G G Q + + D++
Sbjct: 160 FGLKHIIFRFANVYGERQGETGEGGVISVFARKIARKEPVTVFGDGNQTRDFVYAGDIAR 219
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 179
++L V A+ N+ ++ V+L+ + + G ++ VHY P
Sbjct: 220 AMSLGVGYAGCAT---LNVSTNEEVSLNQLIGTMEKILGHKMD-VHYGP 264
>gi|300712100|ref|YP_003737914.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|448295790|ref|ZP_21485853.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|299125783|gb|ADJ16122.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|445583219|gb|ELY37551.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
Length = 328
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
+ RP + G + + +++ DR++ V +PG G + +V D++S L + E+
Sbjct: 156 ALRPCIVYGPHDYTERLDYWIDRVLTHDRVVVPGDGQHLWHRVYVEDVASALRVVGES-- 213
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNMHFY 198
+N+ R +TL + A+ AG V++V + AAG + + FP + +
Sbjct: 214 GVPGEAYNVGDRRLLTLRETLETIAEVAGTAVDVVTAGERELAAGGLSSEEFPLYREYPH 273
Query: 199 AEPRAAKDILGWRST 213
A LGW ST
Sbjct: 274 VMSTATLTDLGWDST 288
>gi|395651883|ref|ZP_10439733.1| NAD-dependent epimerase/dehydratase [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 310
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F +R + ++P+ + G G Q + +V+DL S+L AVE E + I N+ +R+ +L+
Sbjct: 194 FTERALARKPITVFGDGEQTRDFVYVQDLVSILVQAVETREPTTEAI-NVGLNRSTSLND 252
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
+ A G P+ + + P+ I +A R + +A P
Sbjct: 253 LIAELGSATGTPLNVTYQAPRQGDIRHSRADNTRLLEHFALP 294
>gi|262406510|ref|ZP_06083059.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646100|ref|ZP_06723763.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus SD CC 2a]
gi|294808306|ref|ZP_06767064.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
xylanisolvens SD CC 1b]
gi|345510060|ref|ZP_08789638.1| hypothetical protein BSAG_02916 [Bacteroides sp. D1]
gi|229445414|gb|EEO51205.1| hypothetical protein BSAG_02916 [Bacteroides sp. D1]
gi|262355213|gb|EEZ04304.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638544|gb|EFF56899.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus SD CC 2a]
gi|294444525|gb|EFG13234.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
xylanisolvens SD CC 1b]
Length = 338
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 19/161 (11%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGD--VVKP---------DAGHVQVEKYISENFSNWAS 81
+Q++FISSA Y+ H+ +V P +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLADYHITESTPLVNPYWQYSRNKIEAEEVLMAAYRTNGFPV-TI 146
Query: 82 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGDKGNWQILKRILEGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|284046947|ref|YP_003397287.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684]
gi|283951168|gb|ADB53912.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684]
Length = 329
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 40/240 (16%)
Query: 2 EFNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG---DV 58
E N + A+FR A GV++F ++SS+ +++ A E P E
Sbjct: 90 EVNNGLYNAIFRA-------------ALDHGVERFTYVSSSMVFENATEYPTTEAYLPQC 136
Query: 59 VKPDA--------GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---EWFFDRIVRK 107
P + G V +E+ + RP G G D E +++K
Sbjct: 137 PTPTSAYGFSKLTGEVYCRAAHAEHGLPYTICRPFNAYGPGEMPDPEPGIAHMVPDVIKK 196
Query: 108 -----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 162
+P+ I GSG Q + H+ D++ + +A +P A + + FN+ + +T+ A+
Sbjct: 197 VLGGQKPLEIFGSGKQTRTLTHIDDIADGIVVATGHPAALNED-FNISASEELTIAETAR 255
Query: 163 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
+ + G DP A + F + + A+++LGW S ++ E + +
Sbjct: 256 IIWEECG-------EDPAAFRLKHLPTFEVDVVRRWPSVEKARELLGWESRISVREGIAQ 308
>gi|332292586|ref|YP_004431195.1| NAD-dependent epimerase/dehydratase [Krokinobacter sp. 4H-3-7-5]
gi|332170672|gb|AEE19927.1| NAD-dependent epimerase/dehydratase [Krokinobacter sp. 4H-3-7-5]
Length = 330
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 28/225 (12%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY 71
F NN + + A + +K+F+F SS +Y E P E +P+ + + KY
Sbjct: 90 FNYENNLIGSINLINAAVNHNIKKFIFTSSIAVYG-TQELPLKESQKPQPEDPY-GIAKY 147
Query: 72 ISE----NFSN-----WASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGM 117
E N N + FRP + G G N ++ F ++I++ P+ I G G
Sbjct: 148 AVEMDLDNAHNMFGLDYIIFRPHNVYGPGQNIGDKYRNVVGIFMNQILKDEPLTIFGDGN 207
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 177
Q ++ D++ + + +A + N FN+ +D T++ +AK A V I H
Sbjct: 208 QTRAFTYIDDIAPYIAASYAFAKADNQN-FNIGADTENTVNDLAKEVGVAMKKEVIINHL 266
Query: 178 DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
+ + + H YA+ +I + T L + L+E
Sbjct: 267 EQREEVV-----------HAYADHSKFTEIFTLKPATTLAQGLQE 300
>gi|293606526|ref|ZP_06688884.1| GDP-L-fucose synthase [Achromobacter piechaudii ATCC 43553]
gi|292815149|gb|EFF74272.1| GDP-L-fucose synthase [Achromobacter piechaudii ATCC 43553]
Length = 320
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 94/242 (38%), Gaps = 48/242 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD--------------VVKPD 62
N +Q V A ++GV++ LF+ S+ IY P + P + D +
Sbjct: 85 NLMIQCNVIRAAYAAGVRKLLFLGSSCIY-PREAPQPIREDALLTGPLEATNEPYAIAKI 143
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG E Y E + + P + G +N D ++RK V I
Sbjct: 144 AGLKLCEAYQREYGARFICAMPTNLYGPHDNYDLHSSHVLPALIRKFHEGREAGQESVTI 203
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G +V DL+ + +E+P+A I+N+ + + +++ +A L A+ G
Sbjct: 204 WGTGTPLREFLYVDDLAKACVMLMEHPDA--EGIYNIGAGKDISIADLAALVARVVGYQG 261
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD-----ILGWRSTTNLPEDLKERFEEY 227
IV+ K G PR D LGW+ +L + + ++ +
Sbjct: 262 RIVYDTAKPDGT----------------PRKLMDSSRVTALGWQPAVSLTDGIALAYQHF 305
Query: 228 VK 229
++
Sbjct: 306 LR 307
>gi|410665775|ref|YP_006918146.1| NAD dependent epimerase/dehydratase [Simiduia agarivorans SA1 = DSM
21679]
gi|409028132|gb|AFV00417.1| NAD dependent epimerase/dehydratase [Simiduia agarivorans SA1 = DSM
21679]
Length = 332
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 9/144 (6%)
Query: 24 VADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISE------NF 76
V +S GV++ + IS+ +Y + AD E V+ P H K ++E
Sbjct: 101 VVSACESQGVQRLIHISTPSLYFRFADCLNIDEDSVLPPPVNHYAATKALAEARIRESRI 160
Query: 77 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
N FRP+ + G +N R++ K VP P G ++ ++ +L + LA+
Sbjct: 161 PNTVLFRPRAIFGPWDNTLMPRLL--RVIEKSAVPTPRQGRALVDLTYIDNLVDAVLLAL 218
Query: 137 ENPEAASSNIFNLVSDRAVTLDGM 160
P A S +NL + + + + +
Sbjct: 219 HQPLPARSVTYNLSNGQPICISDL 242
>gi|340344000|ref|ZP_08667132.1| UDP-glucose 4-epimerase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519141|gb|EGP92864.1| UDP-glucose 4-epimerase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 310
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 26/225 (11%)
Query: 11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPD--A 63
+F + N V ++ + +K+ +F SSA IY K + P V V
Sbjct: 89 IFVNDVNVNGTLNVLEFCRKRKIKKLVFTSSAAIYGDYEKKITETSPTVPTSVYGSTKLT 148
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNN---KDCEEWFFDRIVRKRPVPIPGSGMQFT 120
G + Y S N + RP + G N F DR+ +P I G+G Q
Sbjct: 149 GEQYCKIYSSLFGINITALRPFNIYGPRQNDAYAGVISKFMDRLNENKPPIIFGNGKQTR 208
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK---LCAQAAGLPVEIVHY 177
+ HV D++ LA++ + S ++FNL + ++ +++ +++ L A +GL + +H
Sbjct: 209 DFIHVDDVAQAFYLALKYKK-KSFDVFNLATGKSTSINELSEIFLLAANKSGL--KTIH- 264
Query: 178 DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
KK+ P +H P K L + T L + + +
Sbjct: 265 ---------KKSIPGVVVHSSTNPNKIKQNLHFTPTIGLKDGITK 300
>gi|402772651|ref|YP_006592188.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. SC2]
gi|401774671|emb|CCJ07537.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. SC2]
Length = 331
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 88/221 (39%), Gaps = 22/221 (9%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY 71
F N+ L R + K +++F+ I ++ +Y D P E + +KP + + +
Sbjct: 100 FFETNSMALARLCEELMKRDWLERFIQIGTSEMYGSVDRPV-TEDEPIKPSSPYAASKVA 158
Query: 72 ISENFSNWASFRPQYM-IGSGNNKDCEEWFFDRIVRKRPV--------PIPGSGMQFTNI 122
+ + A F M I +N C R+V K V P+ G G +
Sbjct: 159 FDMHLLSIARFLKFPMNILRPSNAYCPGQLLHRVVPKAIVSGLLGEKLPLHGGGKAEKSY 218
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKA 181
H RDL + L E A ++N+ ++ + +LCA+A G+P E +
Sbjct: 219 IHARDLGRAIHLVAEG--APLGAVYNVGPSEPTSIRRVVELCAEAVGVPFEQLCEVSGDR 276
Query: 182 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
G D++ ++ + A K +GW + E L E
Sbjct: 277 LGQDSR---------YWLDSSAIKRDVGWEPRIDWAEGLSE 308
>gi|77404745|ref|YP_345318.1| nucleotide di-P-sugar epimerase or dehydratase [Rhodobacter
sphaeroides 2.4.1]
gi|77390395|gb|ABA81577.1| putative nucleotide di-P-sugar epimerase or dehydratase
[Rhodobacter sphaeroides 2.4.1]
Length = 320
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 99/250 (39%), Gaps = 53/250 (21%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPD-------- 62
+N +Q V A ++GV++ LF+ S+ IY +P E + G +++P
Sbjct: 80 DNLMIQSNVIHQAHAAGVRKLLFLGSSCIYPRDVAQPMAEEALLTG-LLEPTNEPYAIAK 138
Query: 63 -AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKR-PVP 111
AG E Y + +++ S P + G G+N E F + +V R V
Sbjct: 139 IAGIKLCESYNRQYGTDYRSVMPTNLYGPGDNFHPENSHVLPALMRRFHEAVVEGRDEVL 198
Query: 112 IPGSGMQFTNIAHVRDLSS----MLTLAVENPEAASSNIF---NLVSDRAVTLDGMAKLC 164
I GSG HV D++ ++ L E A + + NL + +++ +A+L
Sbjct: 199 IWGSGRPMREFLHVDDMAKGALFVMGLDAETYRANTQPMLSHVNLGTGEDISIADLARLI 258
Query: 165 AQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPED 219
A+ G IV K G PR D+ +GWR+ L E
Sbjct: 259 AEVIGFQGRIVFDTSKPDG----------------APRKLMDVGRLTLMGWRAEIALQEG 302
Query: 220 LKERFEEYVK 229
+ E + + K
Sbjct: 303 ITETYRWFTK 312
>gi|163781591|ref|ZP_02176591.1| UDP-glucuronate decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882811|gb|EDP76315.1| UDP-glucuronate decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
Length = 314
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDL-SSMLTLAVENPEAASSNIFNLVSDRAVTLD 158
F + + +P+ + G G Q + ++ DL + LA+E E S +FNL + T+
Sbjct: 191 FIYQAITGKPLTVYGDGSQTRSFCYIDDLVEGIYRLAIE--EGLSGEVFNLGNPTEHTIL 248
Query: 159 GMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 218
+AKL AG P EIV D D +K + AK ++GW T++ E
Sbjct: 249 DLAKLIIDIAGSPSEIVFTDRPVDDPDRRK----------PDITKAKKVIGWEPETSIEE 298
Query: 219 DLK 221
LK
Sbjct: 299 GLK 301
>gi|384181086|ref|YP_005566848.1| putative NAD dependent epimerase/dehydratase family protein
[Bacillus thuringiensis serovar finitimus YBT-020]
gi|324327170|gb|ADY22430.1| putative NAD dependent epimerase/dehydratase family protein
[Bacillus thuringiensis serovar finitimus YBT-020]
Length = 328
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KYI
Sbjct: 86 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYI 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDQAFVHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|419800059|ref|ZP_14325370.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus parasanguinis F0449]
gi|385696428|gb|EIG26916.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus parasanguinis F0449]
Length = 325
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 22/192 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-FSN 78
V D + VK+ +++SS IY + ++ E D P H+ K SE FS+
Sbjct: 95 VLDLCREYAVKRLVYVSSPSIYAAGKDQLNIKESDA--PKENHLNNYIRSKLASEKLFSD 152
Query: 79 WAS-----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
++ RP+ + G G+ R+ RK +P+ G Q ++ V +++ +
Sbjct: 153 YSDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALAIR 210
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP-- 191
LA+E E A ++N+ + T + + + G P+ Y AG+ A A+
Sbjct: 211 LALEAKE-AHGQVYNITNGEPKTFKYLIETTLKGLGEPIR---YRKIPAGLVASAAYSLE 266
Query: 192 --FRNMHFYAEP 201
+R H AEP
Sbjct: 267 GVYRLFHLKAEP 278
>gi|160884450|ref|ZP_02065453.1| hypothetical protein BACOVA_02434 [Bacteroides ovatus ATCC 8483]
gi|237718089|ref|ZP_04548570.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293369749|ref|ZP_06616325.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus SD CMC 3f]
gi|299145996|ref|ZP_07039064.1| putative mRNA-binding protein [Bacteroides sp. 3_1_23]
gi|336413558|ref|ZP_08593910.1| hypothetical protein HMPREF1017_01018 [Bacteroides ovatus
3_8_47FAA]
gi|423286499|ref|ZP_17265350.1| hypothetical protein HMPREF1069_00393 [Bacteroides ovatus
CL02T12C04]
gi|156110189|gb|EDO11934.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus ATCC 8483]
gi|229452510|gb|EEO58301.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292635171|gb|EFF53687.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
ovatus SD CMC 3f]
gi|298516487|gb|EFI40368.1| putative mRNA-binding protein [Bacteroides sp. 3_1_23]
gi|335938602|gb|EGN00492.1| hypothetical protein HMPREF1017_01018 [Bacteroides ovatus
3_8_47FAA]
gi|392675186|gb|EIY68628.1| hypothetical protein HMPREF1069_00393 [Bacteroides ovatus
CL02T12C04]
Length = 335
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 33 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLTDYRITESTPLVNPYWQYSRNKIEAEEVLMSAYRTSGFPV-TI 146
Query: 82 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVAVHGDKGNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|167385482|ref|XP_001737366.1| DTDP-glucose 4,6-dehydratase [Entamoeba dispar SAW760]
gi|165899884|gb|EDR26373.1| DTDP-glucose 4,6-dehydratase, putative [Entamoeba dispar SAW760]
Length = 341
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 103/227 (45%), Gaps = 21/227 (9%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE---K 70
T+NN + + +K++ +K+F+ +S+ +Y E ++ P + + +
Sbjct: 105 THNNIYGTHVLLEVSKANQIKRFIHVSTDEVYGQVIGNAATENSLLNPTNPYAATKAGAE 164
Query: 71 YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV--------RKRPVPIPGSGMQFTNI 122
+I+ +F + SF +I GNN F ++++ R + PI GSG + +
Sbjct: 165 FIARSF--YQSFGLPLIITRGNNVFGPHQFPEKLIPKFITLLDRGQNCPIHGSGEEKRSF 222
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
+V+D+ + + + + I+N+ + R ++ + +A +P E D +
Sbjct: 223 IYVQDVVNAFDVILR--KGVVGQIYNIGTTREISNNEVAHTLLDIFQVPKE--KQDSRIY 278
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
++ + F N Y+ + + LGW++TT+ E LK+ E Y K
Sbjct: 279 HVE-NRCF---NDQRYSLDVSKLEKLGWKTTTSFEEGLKKTVEWYSK 321
>gi|302531552|ref|ZP_07283894.1| predicted protein [Streptomyces sp. AA4]
gi|302440447|gb|EFL12263.1| predicted protein [Streptomyces sp. AA4]
Length = 309
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNW 79
A GV++ +F SSA +Y ++ P E D + P AG + Y +W
Sbjct: 109 AADEGVERLVFASSASVYGEPEKLPMHEDDKLNPLTPYCISKRAGEDLLGFYERTKGLSW 168
Query: 80 ASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ R + G G + F R+ +P I G+G Q + HV DL+ +
Sbjct: 169 NALRFFNVYGPGQKIEAYYTSVINHFIQRLRAGQPPIIDGAGDQSMDFVHVTDLAKGVVA 228
Query: 135 AVENPEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
A+E+ + SN+ N+ + ++ +AK+ +A G+ VE V ++ + + + A R
Sbjct: 229 ALESEQ---SNLPINIGTGIDTSIATLAKILIEAVGVDVEPV-FNKRDVLVSRRAADITR 284
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLK 221
A+++LGW + + E ++
Sbjct: 285 ----------AREVLGWEPSITVEEGMR 302
>gi|448471165|ref|ZP_21600769.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
gi|445820840|gb|EMA70642.1| NAD-dependent epimerase/dehydratase [Halorubrum aidingense JCM
13560]
Length = 319
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---- 90
+ + SS IY +E P E D +PD+ + V+K ++++ + Y + +
Sbjct: 123 RVVLASSVAIYGDPEELPVREDDPKRPDSPY-GVDKLAIDHYARL--YHEHYGLDTVALR 179
Query: 91 -----------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
G+ F D+ RP+ + G G Q + HV D+ A E
Sbjct: 180 YFNVYGPRQSGGSYSGVIGTFVDQARSGRPITVHGDGQQTRDFVHVADVVRANLAAAETD 239
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 189
A FN+ + +VT+ +A+ AG EIVH DP+ +D +A
Sbjct: 240 --AVGRGFNIGTGESVTIRELAEEIRSIAGADSEIVHTDPRDGDVDRSRA 287
>gi|406943288|gb|EKD75324.1| 3-beta hydroxysteroid dehydrogenase/isomerase [uncultured
bacterium]
Length = 315
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 23/208 (11%)
Query: 27 WAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA----GHVQVEKYISENFS----N 78
W+ VKQF+F SS IY A E P +E V+P + G + E Y+ + + N
Sbjct: 102 WSLEKKVKQFIFTSSMNIYGNATEFPVIEDTKVQPPSPYAVGKIASE-YLCQIYQGLGVN 160
Query: 79 WASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
S R + G G + + + +++K P+ + GS +F + V D+
Sbjct: 161 TTSLRLFNVYGPGQDLQNMKQGMVSIYLAYLLKKEPILVRGSQERFRDFVFVEDVVDAFY 220
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
V+ E A ++N+ + R + + K+ A P A I +
Sbjct: 221 RCVD--ERAYGRVYNVATGRKTYVKELLKMLASE-------FTSAPDAYPIIFDEPTLCD 271
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLK 221
Y + + LGW+ + +L E ++
Sbjct: 272 QFGIYGDASRLQKELGWKPSVSLEEGIR 299
>gi|119718949|ref|YP_919444.1| NAD-dependent epimerase/dehydratase [Thermofilum pendens Hrk 5]
gi|119524069|gb|ABL77441.1| NAD-dependent epimerase/dehydratase [Thermofilum pendens Hrk 5]
Length = 308
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 20/226 (8%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 76
N R + A +GV++ +F SSA +Y E +P + + + K + E
Sbjct: 94 NVEGTRALLAEASRAGVRKVVFASSAAVYGDLGGLTAGEEVDARPKSFY-GLTKRVGEEL 152
Query: 77 SNWASFRPQYMI--------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL 128
+ S R + G + + F R++ PV + G G Q + +V D+
Sbjct: 153 CRFFSGRGVVCVALRIFNVYGEYSRRGVIYEFARRVLSGLPVKVYGDGNQTRDFVYVGDV 212
Query: 129 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 188
+ AV + +FN+ S R V+++ + +L Q G K G+ +
Sbjct: 213 ARAFE-AVIAEWSGGFEVFNVASGRCVSVNELVRLFEQVTG----------KRVGVLREP 261
Query: 189 AFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDK 234
A P A A +LG+R++T+L E ++ E + DK
Sbjct: 262 ARPEEIRRSCASTEKAARMLGFRASTSLEEGVRRVVEWVARYAEDK 307
>gi|344995847|ref|YP_004798190.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964066|gb|AEM73213.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 305
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 25/217 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI---SENF 76
+ D+ VK+F+F SSA +Y + P E ++P++ + + E+YI + NF
Sbjct: 98 LLDYCAKYKVKKFIFASSAAVYGEPEYIPIDENHPLRPESFYGLSKLTSEEYIKMFAHNF 157
Query: 77 S-NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
+ + FR + G + E F +R+ + V I G G Q + +V D++
Sbjct: 158 NFEYIIFRCSNVYGPRQDPFGEGGVVSIFCERMQSSKNVIIFGDGTQTRDFIYVEDVAEA 217
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 191
+A+ E + S FNL + + V+++ + ++ + G V Y PK G A
Sbjct: 218 NCVAL---ETSVSGTFNLSTGKNVSVNELFEILSGLTGYKKSPV-YQPKRPGDIA----- 268
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
H K +LG+ +L E LK+ E ++
Sbjct: 269 ----HSCLSNNLLKSVLGFSPQFSLLEGLKKTVEYFI 301
>gi|302876696|ref|YP_003845329.1| NmrA family protein [Clostridium cellulovorans 743B]
gi|307687371|ref|ZP_07629817.1| NmrA family protein [Clostridium cellulovorans 743B]
gi|302579553|gb|ADL53565.1| NmrA family protein [Clostridium cellulovorans 743B]
Length = 286
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 19/154 (12%)
Query: 23 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
P D AK GV Q +FIS GI K P A H ++EKY+ E +
Sbjct: 87 PFIDKAKQMGVLQIIFISILGIDK-------------NPLAQHRRIEKYLKEIEVPYTII 133
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
RP Y + N + I + + IP +G N VRD+++ +
Sbjct: 134 RPSYFMQKLNT-----MYRHEIKVQGKIMIP-AGKAKINFIDVRDVAAFTARVICEENEH 187
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ I+ + A+T A++ + AG VE V+
Sbjct: 188 FNMIYKVTGKEAITYHEAAEIFSNTAGKNVEYVN 221
>gi|444304648|ref|ZP_21140439.1| GDP-L-fucose synthase [Arthrobacter sp. SJCon]
gi|443483063|gb|ELT45967.1| GDP-L-fucose synthase [Arthrobacter sp. SJCon]
Length = 324
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 93/235 (39%), Gaps = 46/235 (19%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKP 61
++N R+Q V D A+ GV++ LF+ S+ IY K AD+P P + +
Sbjct: 93 SDNLRIQVNVLDAAREFGVERLLFLGSSCIYPKFADQPIREDSLLTGHLEPTNDAYAIAK 152
Query: 62 DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWF--------FDRIVRK-RPVPI 112
AG + ++ + W S P + G G+N E +D R PV
Sbjct: 153 IAGIMHIQAVRRQYGLPWISAMPTNLYGPGDNFSPEGSHVMPALIRRYDEAARAGTPVVT 212
Query: 113 P-GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
GSG HV D+++ +EN + +S N+ + VT+ +A L AQA G
Sbjct: 213 NWGSGTPRREFLHVDDMAAACLHLLENYDGSSQ--VNVGTGTDVTIRELATLVAQAVGYE 270
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLK 221
+I K G PR D+ GW S+ L E ++
Sbjct: 271 GDIEWDTTKPDGT----------------PRKLLDVSKLSDAGWTSSIGLEEGIR 309
>gi|114566165|ref|YP_753319.1| GDP-fucose synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337100|gb|ABI67948.1| GDP-fucose synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 308
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 36/237 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N +Q V + A+ VK+ LF+ S+ IY +P E ++G++ +
Sbjct: 83 DNILIQSNVLEAARKYAVKKLLFLGSSCIYPKFAPQPIKEENLLQGELEPSNQAYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW---------FFDRIVRKRP-VPI 112
AG + Y ++ N+ + P + G G+N E F ++ + P + +
Sbjct: 143 AGIAMCQAYRAQYGCNFIAIMPNNLYGPGDNFHPENGHVLPAMINKFHQAMLTRSPQLYL 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G +V DL++ +++ + A +I N+ S ++ +A + A G
Sbjct: 203 WGTGTPRREFLYVDDLATACYFLMKHYDEA--DIINVGSGEEYSISELAAMVAAIVGYQG 260
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
EI+ K G K R + LGW S +L E LK ++ Y+K
Sbjct: 261 EIIWDSSKPDGTPRKLLDASR-----------INALGWHSRVSLWEGLKVTYDWYLK 306
>gi|387784397|ref|YP_006070480.1| Sterol-4-alpha-carboxylate 3-dehydrogenase,decarboxylating
[Streptococcus salivarius JIM8777]
gi|338745279|emb|CCB95645.1| Sterol-4-alpha-carboxylate 3-dehydrogenase,decarboxylating
[Streptococcus salivarius JIM8777]
Length = 326
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 98/238 (41%), Gaps = 40/238 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V + + + +K+ +++SS IY P D+ E D + + ++ YI ++ F
Sbjct: 96 VLEACREANIKRLVYVSSPSIYAAPRDQLGIKESDAPQEN----RLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ + +K +P+ G G Q ++ V +++
Sbjct: 152 KDYPDVSSVILRPRGLFGIGDTSILPRVL--NLSQKIGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAF 190
+ LA+E P+AA ++N+ + + + + G P+ P + I + F
Sbjct: 210 IRLALETPQAA-GEVYNITNGEPRVFRDLIEETLRGLGYPIRYRKIPAPLVSAISSSLEF 268
Query: 191 PFRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 229
++N+ EP +A +D LG+R + E +++ ++Y K
Sbjct: 269 IYKNLKLKGEPALTRYTYYLLRYSQTLDISKAERD-LGYRPKITISEGIEQYVQDYRK 325
>gi|336401994|ref|ZP_08582739.1| hypothetical protein HMPREF0127_00052 [Bacteroides sp. 1_1_30]
gi|335948716|gb|EGN10418.1| hypothetical protein HMPREF0127_00052 [Bacteroides sp. 1_1_30]
Length = 338
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 33 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRNKIEAEEVLMAAYRTNGFPV-TI 146
Query: 82 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGDKGNWQILKRILEGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|148263747|ref|YP_001230453.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
gi|146397247|gb|ABQ25880.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
Length = 309
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 83
+ + A+ G+++ + SSAGI+ P E V+PD+ + + + + ++A
Sbjct: 100 ILEAARKFGIRKIVASSSAGIFGELKTLPIKEDHPVEPDSPYGSTKLCMEKECLSYAKLY 159
Query: 84 P------QYMIGSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRD---- 127
+Y G N+ + + F +++R P+ I G G Q + VRD
Sbjct: 160 DLEAVCLRYFNVYGLNQRFDAYGNVIPIFAYKMLRGEPLTIFGDGEQTRDFLDVRDVVQA 219
Query: 128 -LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA 186
+ + +TL V S FN+ S +T++ + +L + A+ + + H P+
Sbjct: 220 NIKAAMTLGV-------SGAFNIASGSRITINRLVELLSAASAINPLVQHGPPR------ 266
Query: 187 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
P MH A+ RAA + + NL + L+E
Sbjct: 267 ----PGDVMHSLADIRAAHEAFDFTPEINLEDGLRE 298
>gi|435847430|ref|YP_007309680.1| nucleoside-diphosphate-sugar epimerase [Natronococcus occultus SP4]
gi|433673698|gb|AGB37890.1| nucleoside-diphosphate-sugar epimerase [Natronococcus occultus SP4]
Length = 329
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
+ RP + G + + +++ DR+ R V +PG G + A+V D++S L + E E
Sbjct: 157 AVRPCIVYGPHDYTERLDFWIDRVNRFDRVVVPGDGTNVWHRAYVEDVASALRIVAERGE 216
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAG-IDAKKAFPFRNM-H 196
A + +N+ R TL+ L A VE+V P+ AAG I+ +R H
Sbjct: 217 AGEA--YNVGDRRLATLEETLGLIADQLDTTVEVVTAGPRELAAGDIEPADYVLYREYPH 274
Query: 197 FYAEPRAAKDILGWRST 213
A + A LGW ST
Sbjct: 275 VLATGKLAG--LGWEST 289
>gi|385799250|ref|YP_005835654.1| NAD-dependent epimerase/dehydratase [Halanaerobium praevalens DSM
2228]
gi|309388614|gb|ADO76494.1| NAD-dependent epimerase/dehydratase [Halanaerobium praevalens DSM
2228]
Length = 317
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 19/197 (9%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS 73
T+NN + + + A+ S +K+F++ SS+ +Y D+ P E + ++P + + V K
Sbjct: 98 THNNIMGTQRLLEAARGSNIKKFVYASSSSVYGDTDKLPMKETNRLQPVSPY-GVSKLAG 156
Query: 74 EN-----FSNW----ASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIA 123
EN + N+ S R + G D F I++ + + I G G Q N
Sbjct: 157 ENLCYLYYKNFNVPTVSLRYFTVFGERQRPDMAFHIFIKAILQDKKLTIFGDGKQSRNFT 216
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSD--RAVTLDG---MAKLCAQAAGLPVE-IVHY 177
HV D+ LA E+ + FN+ D R V D M K+ + A + +V
Sbjct: 217 HVDDIVKANILAAESDVEGEN--FNIGGDGKRVVLNDAISLMEKIIGKKANREYQKVVKG 274
Query: 178 DPKAAGIDAKKAFPFRN 194
D K D KA N
Sbjct: 275 DVKHTSADTSKAKKLLN 291
>gi|426411737|ref|YP_007031836.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. UW4]
gi|426269954|gb|AFY22031.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. UW4]
Length = 309
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ LF SSA +Y E ++ D K V+K SE
Sbjct: 95 QSNFIGTLNVCEAMRQAGVKRVLFASSAAVYGNNGEGESIDEDTPKAPLTPYAVDKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
+ ++ +R Q+ + G +D F +R ++ P+ + G G Q
Sbjct: 155 QYFDF--YRRQHALEPVIFRFFNIFGPRQDPSSPYSGVISIFSERALKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHY 177
+ +V DL +L A+E P A + N+ ++A TL M + G LP V Y
Sbjct: 213 TRDFVYVEDLVDLLVQAIEKPGAEVGAV-NVGWNQATTLKQMLEALEAVVGQLPP--VSY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|383764932|ref|YP_005443914.1| putative nucleotide sugar epimerase/dehydratase [Caldilinea
aerophila DSM 14535 = NBRC 104270]
gi|381385200|dbj|BAM02017.1| putative nucleotide sugar epimerase/dehydratase [Caldilinea
aerophila DSM 14535 = NBRC 104270]
Length = 330
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
++ P+ +I N + WF + + + + G G Q ++ +V D+ L V +
Sbjct: 185 TYGPRQLI-RHNRQGFIGWFVRLAIEGKTIQLYGDGQQLRDLTYVDDVVDAF-LRVGVSD 242
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
A +FNL + ++L +A+L Q AG VE++ + + ID Y+
Sbjct: 243 VAGGQVFNLGGQKPISLLALAELIVQLAGRGRVELIPWPEERKKIDIGNV--------YS 294
Query: 200 EPRAAKDILGWRSTTNLPEDLK-------ERFEEY 227
+ LGW TT L E L+ E FE Y
Sbjct: 295 SYARIQTTLGWSPTTPLEEGLRRMIAYYTEYFEHY 329
>gi|298481169|ref|ZP_06999363.1| mRNA-binding protein [Bacteroides sp. D22]
gi|298272743|gb|EFI14310.1| mRNA-binding protein [Bacteroides sp. D22]
Length = 338
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 33 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRNKIEAEEVLMAAYRTNGFPV-TI 146
Query: 82 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGDKGNWQILKRILEGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|423213757|ref|ZP_17200286.1| hypothetical protein HMPREF1074_01818 [Bacteroides xylanisolvens
CL03T12C04]
gi|295084039|emb|CBK65562.1| Nucleoside-diphosphate-sugar epimerases [Bacteroides xylanisolvens
XB1A]
gi|392693414|gb|EIY86646.1| hypothetical protein HMPREF1074_01818 [Bacteroides xylanisolvens
CL03T12C04]
Length = 338
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 33 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRNKIEAEEVLMAAYRTNGFPV-TI 146
Query: 82 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGDKGNWQILKRILEGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|148272012|ref|YP_001221573.1| putative nucleotide sugar epimerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829942|emb|CAN00867.1| putative nucleotide sugar epimerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 347
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 34 KQFLFISSAGIY-KPADEPPHVEGDV-VKPDAGHVQVEKYISENF--SNWAS------FR 83
+QF+ ISSA IY KPA + P E + P + + + + + F + AS R
Sbjct: 100 RQFVAISSASIYRKPALQTPITESTLRANPFLSYARDKIAMEDAFLRHHAASGFPVVIVR 159
Query: 84 PQYMIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
P + + +W DRI R V +PG G + H D + L + + E A
Sbjct: 160 PSHTYDEASPPLAGDWTVVDRIARGDEVVVPGDGTSLWTLTHADDFAVGL-VGILGDERA 218
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
++ SD T D + L A A G+ +VH
Sbjct: 219 VGEALHITSDDVSTWDRIHHLVADALGVEARLVH 252
>gi|363583218|ref|ZP_09316028.1| GDP-fucose synthetase [Flavobacteriaceae bacterium HQM9]
Length = 302
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 102/238 (42%), Gaps = 42/238 (17%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA------------- 63
N ++Q + D + G ++F+F+ S+ IY P P ++ D + DA
Sbjct: 70 NMQIQNNLIDASLQLGTEKFIFLGSSCIY-PKLAPQPLKEDYLLTDALEPTNEWYAIAKI 128
Query: 64 GHVQVEKYISENFS-NWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
V+ + I + F+ ++ S P + G+ +N D + ++RK PV +
Sbjct: 129 SGVKTCEAIRKQFNKDYVSLMPTNLYGTHDNFDLKTSHVLPAMIRKFHEAKLNGNTPVNL 188
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 170
GSG V D+++ + A+EN PE +++N+ + +T+ +A+ + G
Sbjct: 189 WGSGTPMREFLFVDDMAAAVVFALENKLPE----HLYNIGTGEDLTIKELAETIQKVVGH 244
Query: 171 PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
EIV K G +K MH LGW+ +L +++ ++ ++
Sbjct: 245 TGEIVWDSSKPDGT-PRKLMDISKMH----------ALGWQHKVDLASGIEKTYQWFL 291
>gi|150399165|ref|YP_001322932.1| NAD-dependent epimerase/dehydratase [Methanococcus vannielii SB]
gi|150011868|gb|ABR54320.1| NAD-dependent epimerase/dehydratase [Methanococcus vannielii SB]
Length = 319
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-KPDAGHVQVEKY---ISENFSNW 79
+ + AK G+K+ +F SS+ +Y ++ P +E D V KP + + +KY I+ +++
Sbjct: 111 IFELAKKYGIKRVIFASSSSVYGGNEKTPFLESDNVDKPVSLYAATKKYNELIAHVYNHL 170
Query: 80 -----ASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
R + G D W F + I+ ++P+ + G + ++ D+ +
Sbjct: 171 YGIEMIGLRFFTVYGEFGRPDMAYWKFTKNILEEKPIDVYNYGKMKRDFTYISDIVEGIK 230
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 169
AV + IFNL D + L+ M L + G
Sbjct: 231 SAVFLSKKIDYEIFNLGGDNPIELEYMISLIEKETG 266
>gi|88808149|ref|ZP_01123660.1| putative GDP-L-fucose synthetase [Synechococcus sp. WH 7805]
gi|88788188|gb|EAR19344.1| putative GDP-L-fucose synthetase [Synechococcus sp. WH 7805]
Length = 318
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 36/237 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N ++Q V + A +GV++ LF+ S+ IY K A++P P E + A
Sbjct: 88 NLKIQTNVIETAWCNGVRRLLFLGSSCIYPKFAEQPIKEESLLTGALEPTNEWYAIAKIA 147
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G E ++ + S P + G G+N E ++R+ V
Sbjct: 148 GIKLCESLRRQHGFDAISLMPTNLYGPGDNYHPENSHVLPALIRRFYEAKESGAETVTCW 207
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVE--NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
G+G HV DL+ A+E NP + + N+ + +T+ +AKL A A G
Sbjct: 208 GTGSPMREFLHVDDLAEACVYALEKWNPYSEENKFLNVGTGVDITIRELAKLVANAIGYE 267
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
++ K G KK N+ + LGW + L + +K +++
Sbjct: 268 GSVIWDSAKPDGT-PKKQLDVSNI----------NKLGWSAKIKLNQGIKRTVIDFI 313
>gi|418051490|ref|ZP_12689574.1| NAD-dependent epimerase/dehydratase [Mycobacterium rhodesiae JS60]
gi|353184182|gb|EHB49709.1| NAD-dependent epimerase/dehydratase [Mycobacterium rhodesiae JS60]
Length = 339
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 43/230 (18%)
Query: 25 ADWA-KSSGVKQFLFISSAGIYKPADEPPHVEGDVVK--PDAGHVQVEKYISENFSN--W 79
A WA ++S +++ +SS+ +Y+ P EG+ + P +K +E F+ W
Sbjct: 107 AIWAHRNSSLRKITVVSSSMVYESTSSYPTPEGEQRRCPPPESTYGFQKLATEYFAQGAW 166
Query: 80 ASF-------RPQYMIGSGNNKD-CEEWFFDRIVR-----------------KRPVPIPG 114
+ RP IG G + C+ VR + P+ I G
Sbjct: 167 EQYQLPYTIVRPFNCIGIGEKRALCDREIMSGNVRLAMSHVVPDLVQKVLKGQDPLHILG 226
Query: 115 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA--AGLPV 172
G Q + + DL+ + LA+E+ +AA + FNL + + T+ +A++ + P+
Sbjct: 227 DGDQVRHYTYGGDLARGIRLAIES-DAAHNEDFNLSTATSTTVHELAEVIWRKIKGDTPL 285
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
I DP FP+ + + A D LG+++TT+L E L E
Sbjct: 286 RITSDDP----------FPYDVQRRVPDVQKAMDTLGFKATTSLDEALDE 325
>gi|312793329|ref|YP_004026252.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180469|gb|ADQ40639.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 305
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 25/217 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI---SENF 76
+ D+ VK+F+F SSA +Y + P E ++P++ + + E+YI + NF
Sbjct: 98 LLDYCAKYKVKKFIFASSAAVYGEPEYIPIDENHPLRPESFYGLSKLTSEEYIKMFAHNF 157
Query: 77 S-NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
+ + FR + G + E F +R+ + V I G G Q + +V D++
Sbjct: 158 NFEYIIFRYSNVYGPRQDPFGEGGVVSIFCERMQSSKNVIIFGDGTQTRDFIYVEDVAEA 217
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 191
+A+ E + S FNL + + V+++ + ++ + G V Y PK G A
Sbjct: 218 NCVAL---ETSVSGTFNLSTGKNVSVNELFEILSGLTGYKKSPV-YQPKRPGDIA----- 268
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
H K +LG+ +L E LK+ E ++
Sbjct: 269 ----HSCLSNNLLKSVLGFSPQFSLLEGLKKTVEYFI 301
>gi|332706591|ref|ZP_08426652.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
gi|332354475|gb|EGJ33954.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
Length = 352
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 34 KQFLFISSAGIYKPADEPPHVE------GDVVKPDA--GHVQVEKYISENFSNWASFRPQ 85
++F+ +S+ G++ + PP E GD+ + G + + + + RP
Sbjct: 118 QRFVHVSTIGVHGHVENPPGDENCPMHPGDIYQETKLEGELWIRDFAKKEGLPVTVVRPS 177
Query: 86 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 145
+ G G + + + ++V ++ +PI G+G ++ HV DL++ L+ +P+A
Sbjct: 178 GIYGPGEKRFLKIF---KMVGRKWIPIIGNGSNLLHLIHVDDLTNFFILSATHPQAV-GE 233
Query: 146 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
+F S A+T M + ++ G+ + +
Sbjct: 234 VFICGSKEAITFQKMVSIISEYYGISFKFI 263
>gi|341874156|gb|EGT30091.1| hypothetical protein CAEBREN_25184 [Caenorhabditis brenneri]
Length = 342
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 85/211 (40%), Gaps = 17/211 (8%)
Query: 32 GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVEKYISENF--SNWASFRPQYM 87
GVK+ + IS+ +Y + D P E + K E S W S++ Y+
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187
Query: 88 IGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
+ NN +++ K +P P+ G G+ + +V D S +T
Sbjct: 188 MVRMNNVYGPRQIHTKLIPKFTKLALDGQPYPLMGDGLHTRSWMYVEDCSEAITRVAL-- 245
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
E I+N+ +D +T + K+ ++++ +P P+ + +Y
Sbjct: 246 EGKLGEIYNIGTDFEMTNIELTKMIHSTVS---KLLNREPTPPTFAPIPDRPYHDRRYYI 302
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
+ ++ +GW+ TT E L + E YVK+
Sbjct: 303 DFSKIRNAMGWQCTTPFSEGLMKTIEYYVKL 333
>gi|228921968|ref|ZP_04085279.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228837576|gb|EEM82906.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 326
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + +K G+K+ + +S+ IY DE +V + PDA H K++
Sbjct: 84 NANVLGTKHIIEGSKKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDAFVNHYATTKHM 143
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 144 AEQAIDQAFMHGLPVITIRPRAVFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 201
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D V L
Sbjct: 202 VENVVDALLLCMHSPKHTLGKKYNITNDERVNL 234
>gi|359800693|ref|ZP_09303232.1| GDP-L-fucose synthase [Achromobacter arsenitoxydans SY8]
gi|359361394|gb|EHK63152.1| GDP-L-fucose synthase [Achromobacter arsenitoxydans SY8]
Length = 317
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 38/237 (16%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD--------------VVKPD 62
N +Q V A ++GV++ LF+ S+ IY P + P + D +
Sbjct: 85 NLMIQCNVIRAAYAAGVRKLLFLGSSCIY-PREAPQPIREDALLTGPLEATNEPYAIAKI 143
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG E Y E + + P + G +N D ++RK V I
Sbjct: 144 AGLKLCEAYQREFGARFICAMPTNLYGPHDNYDLHSSHVLPALIRKFHEGREAGQESVTI 203
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G +V DL+ + +E+P+A I+N+ + + +++ +A+L A+ G
Sbjct: 204 WGTGAPLREFLYVDDLAQGCVMLMEHPDA--EGIYNIGAGKDISIADLAQLVARVVGYRG 261
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
IV+ K G K R LGWR +L + + + +++
Sbjct: 262 NIVYDTSKPDGTPRKLMDSSR-----------VQALGWRPEISLTDGITLAYGHFLR 307
>gi|390439716|ref|ZP_10228094.1| UDP-glucose 4-epimerase [Microcystis sp. T1-4]
gi|389836873|emb|CCI32218.1| UDP-glucose 4-epimerase [Microcystis sp. T1-4]
Length = 326
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SEN 75
+ + + +GVK F+FISS G + E PD+ + +Q E+ + ++
Sbjct: 100 LVEQSIQAGVKHFIFISSIGAMTTQSDRILTENSPCHPDSPYGRSKLQAEQALINLAKDS 159
Query: 76 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSML 132
W RP + G GN + DR+++ KR +P+P G+ + V +L + +
Sbjct: 160 NMTWTILRPTLVYGPGNPGN-----IDRLMKLIKRGLPLPFGAVKNRRSFVFVGNLVAAI 214
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
+++P AA + IF + ++AV+ + +L AQ P ++
Sbjct: 215 ITCLDHPNAA-NQIFLISDNQAVSTPQLIRLIAQQIQQPCRLL 256
>gi|373497608|ref|ZP_09588131.1| hypothetical protein HMPREF0402_02004 [Fusobacterium sp. 12_1B]
gi|371962973|gb|EHO80547.1| hypothetical protein HMPREF0402_02004 [Fusobacterium sp. 12_1B]
Length = 325
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 91/218 (41%), Gaps = 22/218 (10%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----KPDAG---HVQVE 69
N R + + K+ G+K+F+ SS+ +Y + P E D+V P A +V
Sbjct: 109 NVRGTMNLLESCKNLGIKKFIQASSSSVYGNNKKAPFKETDIVDFAISPYAATKKSCEVM 168
Query: 70 KYISENFSNWASFRPQYMIGSGNNK--DCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVR 126
++ F+ ++ G+ + D + F + I+ R +P G G F + +++
Sbjct: 169 GHVYHKLYGIDMFQLRFFTVYGDRQRPDLAIYKFTKMIMEGREIPFYGEGNTFRDYTYIK 228
Query: 127 DLSSMLTLAVENPEAASS--NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
D+ + +++ E S+ I NL V+L M + +I + +
Sbjct: 229 DIVQGIKKSIDYLENNSNVYEILNLGESNTVSLKEMVATIENVLEIKAKINKLPMQMGDV 288
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
D YA+ R A++++G+ TT + +++
Sbjct: 289 DKT----------YADIRKARELIGYNPTTEFEDGIRK 316
>gi|17568069|ref|NP_508390.1| Protein F53B1.4 [Caenorhabditis elegans]
gi|351061071|emb|CCD68828.1| Protein F53B1.4 [Caenorhabditis elegans]
Length = 342
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 86/211 (40%), Gaps = 17/211 (8%)
Query: 32 GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVEKYISENF--SNWASFRPQYM 87
GVK+ + IS+ +Y + D P E + K E S W S++ Y+
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187
Query: 88 IGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
+ NN +++ K +P P+ G G+ + +V D S +T
Sbjct: 188 MVRMNNVYGPRQIHTKLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAITRVAL-- 245
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
E I+N+ +D +T + K+ ++++ +P A P+ + +Y
Sbjct: 246 EGTLGEIYNIGTDFEMTNIELTKMIHFTVS---KLLNREPTAPTFAPIPDRPYHDRRYYI 302
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
+ ++ +GW+ TT E L + + YVK+
Sbjct: 303 DFSKIRNAMGWQCTTPFSEGLMKTIDYYVKL 333
>gi|374998177|ref|YP_004973676.1| NAD-dependent epimerase/dehydratase [Azospirillum lipoferum 4B]
gi|357425602|emb|CBS88496.1| NAD-dependent epimerase/dehydratase [Azospirillum lipoferum 4B]
Length = 313
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F RI R P+ I G G Q + V+DL LT A++ P + + +FN+ + R T++
Sbjct: 196 FAGRIARGEPITINGDGQQVRDFIFVKDLVRYLTAAMDTPRSGAP-VFNVCTGRPTTVNR 254
Query: 160 MAKLCAQAAGLPVE 173
+A++ + +G P++
Sbjct: 255 LAEVLGELSGRPLD 268
>gi|333979172|ref|YP_004517117.1| UDP-glucuronate 4-epimerase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822653|gb|AEG15316.1| UDP-glucuronate 4-epimerase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 319
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 22/223 (9%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----KPDAGHVQVEKYI 72
N R + + + A+ GVKQF+F SS+ +Y P E D V P A + +
Sbjct: 103 NVRGTQNLLELAREWGVKQFIFASSSSVYGVNPNVPWREDDCVLMPISPYAATKVAGELL 162
Query: 73 SENFSN-----WASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVR 126
+S+ + + R + G D F R +++ P+PI G G + ++
Sbjct: 163 GHVYSHLYGIRFIALRLFTVYGPRQRPDLAIHKFARKMLKGEPIPIYGDGTSRRDYTYID 222
Query: 127 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA 186
D+ + A++ E + I NL +++ V+L M + + G+ + P+ + +
Sbjct: 223 DVIQGMRAAMDYTE-SQYEIINLGNNKTVSLLEMVRALEEVFGVKARLEILPPQPGDVPS 281
Query: 187 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+A A+ +LG+R +T E L+ F +VK
Sbjct: 282 T----------WANVENARRLLGFRPSTPFGEGLRS-FAAWVK 313
>gi|84684183|ref|ZP_01012085.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein,
putative [Maritimibacter alkaliphilus HTCC2654]
gi|84667936|gb|EAQ14404.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein,
putative [Rhodobacterales bacterium HTCC2654]
Length = 327
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISEN 75
N R V D A+ GV++F+ +SS+ +Y D+ E D + K +SE
Sbjct: 92 NLIGTRNVVDLARRLGVRRFVQVSSSTVYFALRDQLDLREDDPLPKPFNQYARTKRLSEE 151
Query: 76 FSNWA------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 129
+ A + RP+ + G+G+ + +RP+P+ G ++ HV D+
Sbjct: 152 IALAAPDIGPLAIRPRGLYGAGDTVLLPRLL--KTAAERPLPLLRGGAARIDLTHVEDVV 209
Query: 130 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK-LCAQAA 168
+ + ++ P +A +FN+ + + +A+ CA+A
Sbjct: 210 AAIIAGLDAPTSAEGEVFNVTGGETIPVTRLAESACARAG 249
>gi|428205758|ref|YP_007090111.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
gi|428007679|gb|AFY86242.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
Length = 318
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
N ++R +A+ AK++GV +F+++SS +Y +E E V+P + I
Sbjct: 74 NLHYRDAMHLANLAKAAGVSRFIYLSSCSVYGAGEEEYVTEESPVRPQTPSATCKAAIES 133
Query: 75 NFSNWAS-------FRPQYMIGSG---------NNKDCEEWFFDRIVRKRPVPIPGSGMQ 118
+ AS RP G+ NN W ++I IPG G+
Sbjct: 134 DLLTIASAEFSPTILRPAIAFGASPRIRFDVVLNNMAGLAWTANKI------NIPGKGLS 187
Query: 119 FTNIAHVRDLSSMLTLAVENPE-AASSNIFNL 149
+ + HV D+ ++ ++ P IFN+
Sbjct: 188 WCPVVHVLDICQIINCILQAPRPLVHQQIFNV 219
>gi|404366465|ref|ZP_10971848.1| hypothetical protein FUAG_01665 [Fusobacterium ulcerans ATCC 49185]
gi|404288992|gb|EFS26150.2| hypothetical protein FUAG_01665 [Fusobacterium ulcerans ATCC 49185]
Length = 319
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 30/222 (13%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----KPDA--------- 63
N R + + K+ G+K+F+ SS+ +Y + P E D+V P A
Sbjct: 103 NVRGTMNLLESCKNLGIKKFIQASSSSVYGNNKKAPFKETDIVDFAISPYAATKKSCEVM 162
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNI 122
GHV + Y + F R + G D + F + I+ R +P G G F +
Sbjct: 163 GHVYHKLYGIDMF----QLRFFTVYGERQRPDLAIYKFTKMIMEGREIPFYGEGNTFRDY 218
Query: 123 AHVRDLSSMLTLAVENPEAASS--NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
+++D+ + +++ E S+ I NL V+L M + +I +
Sbjct: 219 TYIKDIVQGIKKSIDYLENNSNIYEILNLGESNTVSLKEMVTTIENVLEIKAKINKLPIQ 278
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
+D YA+ R A++++G+ TT + +++
Sbjct: 279 MGDVDKT----------YADIRKARELIGYNPTTEFEDGIRK 310
>gi|15789654|ref|NP_279478.1| hypothetical protein VNG0405C [Halobacterium sp. NRC-1]
gi|169235368|ref|YP_001688568.1| dtdpglucose 4,6-dehydratase-like protein [Halobacterium salinarum
R1]
gi|10580018|gb|AAG18958.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167726434|emb|CAP13219.1| NAD-dependent epimerase/dehydratase [Halobacterium salinarum R1]
Length = 329
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
+ RP + G + + ++ +R+ + + +PG G +V D++ L L E+ E
Sbjct: 157 AVRPPVVYGPHDYTERLAYWVERVAERDEIVVPGDGTNLWQRVYVEDVARGLRLVAEDGE 216
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID--AKKAFP-FRNM-H 196
+ +N+ AVTLDGM L A A VE + P+ I FP +R+ H
Sbjct: 217 PGEA--YNVGDRNAVTLDGMLDLIADALDTSVERSYTSPRELSIVDLGPGEFPLYRDAPH 274
Query: 197 FYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR--DKKAMQFEIDDKILESL 249
+ A+ LG+ ST E ++ + + + GR D E +D++L+ L
Sbjct: 275 VLDTTKIAE--LGYESTPP-AEAMQRTVDAHREHGRTGDDNGPDRETEDRLLDVL 326
>gi|429217696|ref|YP_007175686.1| nucleoside-diphosphate-sugar epimerase [Caldisphaera lagunensis DSM
15908]
gi|429134225|gb|AFZ71237.1| nucleoside-diphosphate-sugar epimerase [Caldisphaera lagunensis DSM
15908]
Length = 319
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 29/228 (12%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPAD-----------EPPHVEGDVVKPDAGH 65
N L + + + + VK F SS+ +Y A EP V G A
Sbjct: 99 NVYLTYNILEAMRKNNVKVLAFASSSTVYGEAKKIPTPEDYGPLEPISVYGGA--KLASE 156
Query: 66 VQVEKYISENFS-NWASFRPQYMIGSGNNKDCEEWFFDRIVR-KRPVPIPGSGMQFTNIA 123
+ Y S F N SFR +IG +N F +++ + K + I G G Q +
Sbjct: 157 ALISSY-SHTFKLNSVSFRLANVIGKRSNHGVIHDFIEKLKKDKTRLEILGDGTQSKSYI 215
Query: 124 HVRD-LSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK- 180
HV D + M L +N E +++N+ SD VT+ +AK+ + GL +PK
Sbjct: 216 HVSDVIEGMHYLLNKNLEKNIIYDVYNIGSDDQVTVMDIAKIIIEKMGL-------NPKI 268
Query: 181 --AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 226
G+D + + + AK I GWR N E +K +E
Sbjct: 269 YLTGGVDGGRGWIGDVKYMLLSIEKAKSI-GWRPKLNSYEAVKRAVDE 315
>gi|402493409|ref|ZP_10840162.1| UDP-N-acetylglucosamine 4-epimerase [Aquimarina agarilytica ZC1]
Length = 332
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 34/222 (15%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 87
A+ + VK+F++ +S+ Y + P VE + P + + + KY++E ++N +F+ Y
Sbjct: 118 ARDNNVKRFIYAASSSTYGDSISMPKVEDKIGNPLSPYA-ITKYVNELYAN--NFKKTYN 174
Query: 88 IGS---------GNNKDCEEW-------FFDRIVRKRPVPIPGSGM---QFTNIAHVRDL 128
+ + G +D F ++++ I G G FT I +V +
Sbjct: 175 LDTIGLRYFNVFGRKQDPNGAYAAVIPKFVMQLMKHESPVINGDGSYSRDFTYIDNVIQM 234
Query: 129 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 188
+ ML +A +N EA + N++N TL+ + L + + YDPK AG++ K
Sbjct: 235 N-MLAMASDNSEALN-NVYNTAFGERTTLNELTSLLKE------NLSMYDPKIAGVEIKF 286
Query: 189 AFPFRNM---HFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
P R H A AK +L + ++ LKE + Y
Sbjct: 287 G-PERRGDVPHSLASVDKAKSLLNYDPKFDIKSGLKEAVDWY 327
>gi|335049051|ref|ZP_08542062.1| NAD dependent epimerase/dehydratase family protein [Megasphaera sp.
UPII 199-6]
gi|333764496|gb|EGL41890.1| NAD dependent epimerase/dehydratase family protein [Megasphaera sp.
UPII 199-6]
Length = 309
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-- 81
+ + + V++F+F SSA +Y P E + P + + + K +E +
Sbjct: 100 ILELCRRHTVRKFIFSSSAAVYGDNTRVPLKETEATTPLSFY-GLTKCTAEAYIRMYHDI 158
Query: 82 FRPQYMI----------GSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSS 130
F+ Y+I GN + + F + + + + + + G G Q + +V+D++
Sbjct: 159 FQVPYVILRYANVYGERQGGNGEGGVVFVFSQALAQGKEITVFGDGEQTRDFVYVKDVAR 218
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
A++ + +N+ ++ T++ + ++ AG P VHY+P A+
Sbjct: 219 ANVCALQ--ANGTEGTYNIATNIETTVNALKEMLVYIAGTPTH-VHYEP------ARSGD 269
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
+R++ A +A +D LGW TT L L++ +
Sbjct: 270 IYRSV--LANTKAVQD-LGWEPTTKLLGGLQQTY 300
>gi|417917632|ref|ZP_12561191.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus parasanguinis SK236]
gi|342830269|gb|EGU64608.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus parasanguinis SK236]
Length = 325
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 22/192 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-FSN 78
V D + VK+ +++SS IY + ++ E D P H+ K SE FS+
Sbjct: 95 VLDLCREYAVKRLVYVSSPSIYAAGKDQLNIKESDT--PTENHLNNYIRSKLASEKLFSD 152
Query: 79 WAS-----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
+ RP+ + G G+ R+ RK +P+ G Q ++ V +++ +
Sbjct: 153 YPDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALAIR 210
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP-- 191
LA+E E A ++N+ + T + + + G P + Y AG+ A A+
Sbjct: 211 LALEAKE-AQGQVYNITNGEPKTFKYLIETTLKGLGEP---IRYRKIPAGLVAGAAYSLE 266
Query: 192 --FRNMHFYAEP 201
+R H AEP
Sbjct: 267 GVYRFFHLKAEP 278
>gi|425438159|ref|ZP_18818568.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9432]
gi|389676719|emb|CCH94292.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9432]
Length = 326
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SENFSNWASF 82
+GVK F+FISS G + E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFISSIGAMTTQSDRILTENSPCHPDSPYGRSKLQAEQALINLAKDSNMTWTII 166
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEA 141
RP + G GN + E +++ KR +P+P G+ + V +L + + +++P A
Sbjct: 167 RPTLVYGPGNPGNMERLM--KLI-KRGLPLPFGAIKNRRSFVFVGNLVAAIITCLDHPNA 223
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
A+ IF + ++AV+ + +L AQ P +++
Sbjct: 224 ANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|387879545|ref|YP_006309848.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus parasanguinis
FW213]
gi|386792998|gb|AFJ26033.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus parasanguinis
FW213]
Length = 325
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 22/192 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-FSN 78
V D + VK+ +++SS IY + ++ E D P H+ K SE FS+
Sbjct: 95 VLDLCREYAVKRLVYVSSPSIYAAGKDQLNIKESDA--PKENHLNNYIRSKLASEKLFSD 152
Query: 79 WAS-----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
++ RP+ + G G+ R+ RK +P+ G Q ++ V +++ +
Sbjct: 153 YSDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALAIR 210
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP-- 191
LA+E E A ++N+ + T + + + G P+ Y AG+ A A+
Sbjct: 211 LALEAKE-AHGQVYNITNGEPKTFKYLIETTLKGLGEPIR---YRKIPAGLVAGVAYSLE 266
Query: 192 --FRNMHFYAEP 201
+R H AEP
Sbjct: 267 GVYRFFHLKAEP 278
>gi|311107665|ref|YP_003980518.1| GDP-L-fucose synthase [Achromobacter xylosoxidans A8]
gi|310762354|gb|ADP17803.1| GDP-L-fucose synthase [Achromobacter xylosoxidans A8]
Length = 317
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 38/237 (16%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD--------------VVKPD 62
N +Q V A ++GV++ LF+ S+ IY P + P + D +
Sbjct: 85 NLMIQCNVIRAAYAAGVRKLLFLGSSCIY-PREAPQPIREDALLTGPLEATNEPYAIAKI 143
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG E Y E + + P + G +N D + ++RK V I
Sbjct: 144 AGLKLCEAYQREFGARFICAMPTNLYGQHDNYDLQSSHVLPALIRKFHEGREAGQESVSI 203
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G +V DL+ + +E+P+A ++N+ + + +++ +A+L A+ G
Sbjct: 204 WGTGAPLREFLYVDDLAQACVMLMEHPQA--EGMYNIGAGQDISIADLARLVARVVGYEG 261
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
IV+ K G P + M A LGW+ +L + + +++
Sbjct: 262 NIVYDSSKPDGT------PRKLMD-----SARVQALGWKPEISLTHGITLAYGHFLR 307
>gi|150025365|ref|YP_001296191.1| UDP-N-acetylglucosamine C4 epimerase [Flavobacterium psychrophilum
JIP02/86]
gi|149771906|emb|CAL43380.1| UDP-N-acetylglucosamine C4 epimerase [Flavobacterium psychrophilum
JIP02/86]
Length = 326
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 32/221 (14%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 87
AK + VK+F++ +S+ Y ++ P VE + KP + + + KYI+E +++ F Y
Sbjct: 112 AKEAKVKRFIYAASSSTYGDSESLPKVENVIGKPLSPYA-ITKYINELYADI--FSKTYA 168
Query: 88 IGS---------GNNKDCEEW-------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
I + G +D + F + + I G G + ++ ++ M
Sbjct: 169 IETIGLRYFNVFGRKQDPKGAYAAVIPKFVQQFINYENPVINGDGNYSRDFTYIDNVIQM 228
Query: 132 LTLAV--ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 189
LA+ +NPEA ++ ++N + TL+ + K L E+ +DPK A ++
Sbjct: 229 NELAMFTQNPEAVNT-VYNTAFGDSTTLNDLVK------KLQFELSQFDPKIANVNIIYG 281
Query: 190 FPFRNM---HFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
P R H A AK +LG+ ++ E LK+ + Y
Sbjct: 282 -PNRAGDIPHSLASIDKAKKLLGYNPKFSMQEGLKQSVKWY 321
>gi|448310886|ref|ZP_21500665.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
gi|445607234|gb|ELY61127.1| NAD-dependent epimerase/dehydratase [Natronolimnobius
innermongolicus JCM 12255]
Length = 316
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 12/126 (9%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F ++ P+ + G G Q + H+ D+ LA + ++ FN+ + VT+
Sbjct: 198 FLEQARNGEPITVNGDGTQTRDFVHISDVVQANLLAAQTESVGAA--FNVGTGETVTIRE 255
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A+ G EIVH DP+ I+ + AE A + LG+ T L +
Sbjct: 256 LAETIRSVVGSDSEIVHRDPRPGDIEQSQ----------AELSAIRSALGYEPTVTLADG 305
Query: 220 LKERFE 225
L+ E
Sbjct: 306 LQTLVE 311
>gi|405378690|ref|ZP_11032605.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF142]
gi|397324790|gb|EJJ29140.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF142]
Length = 321
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 82 FRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
P +++G G N F + R + +P GM+ + H D++ + A+
Sbjct: 155 IHPGHIVGPGWNPLNPAGHFNPEVFTSLARGETLALPNFGMETVHHVHADDIAELFMAAI 214
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCA 165
PEAA F+ VS++AVTL G A+ A
Sbjct: 215 AKPEAAIGQAFHAVSEKAVTLRGYAEAMA 243
>gi|228928274|ref|ZP_04091315.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228946838|ref|ZP_04109140.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228812825|gb|EEM59144.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228831321|gb|EEM76917.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 326
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 84 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 143
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 144 AEQAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 201
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 202 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 234
>gi|52142303|ref|YP_084525.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
E33L]
gi|301054729|ref|YP_003792940.1| NAD dependent epimerase/dehydratase [Bacillus cereus biovar
anthracis str. CI]
gi|423551055|ref|ZP_17527382.1| hypothetical protein IGW_01686 [Bacillus cereus ISP3191]
gi|51975772|gb|AAU17322.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus E33L]
gi|300376898|gb|ADK05802.1| putative NAD dependent epimerase/dehydratase family protein
[Bacillus cereus biovar anthracis str. CI]
gi|401188388|gb|EJQ95456.1| hypothetical protein IGW_01686 [Bacillus cereus ISP3191]
Length = 328
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 86 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|46446796|ref|YP_008161.1| hypothetical protein pc1162 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400437|emb|CAF23886.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 269
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 99 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 158
W DR++R PG+G Q TN+ H+ D+ L A++N IFNL +D +
Sbjct: 163 WITDRVIRMHQYSFPGTGNQLTNVIHLTDIVRALDFALQNKLHG---IFNLCNDFHIPRK 219
Query: 159 GMAKLCAQAAGLP 171
+ Q+A LP
Sbjct: 220 LFYEQLLQSAHLP 232
>gi|196032305|ref|ZP_03099719.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus W]
gi|195995056|gb|EDX59010.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus W]
Length = 328
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 86 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|422294395|gb|EKU21695.1| dTDP-glucose 4,6-dehydratase [Nannochloropsis gaditana CCMP526]
Length = 358
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 95/227 (41%), Gaps = 24/227 (10%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYK--PADEPPHVEGDVVKPDAGHVQVE-- 69
T NN + + AK +K+F+ +S+ +Y AD+ P E V++P + +
Sbjct: 116 TQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAG 175
Query: 70 -KYISENFSNWASFRPQYMIGSGNN--------KDCEEWFFDRIVRKRPVPIPGSGMQFT 120
++I++++S SF +I GNN + F + ++R RPV + G+G+
Sbjct: 176 AEFIAKSYSR--SFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTR 233
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
N +V D++ + + + I+N+ +AK + G H +
Sbjct: 234 NFLYVEDVARAFEVILH--RGVTGKIYNIGGTHEKANIEVAKDLIRLMG------HGKEE 285
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
+ + F ++ + A K LGWR + + L + E Y
Sbjct: 286 EKMLQFVEDRAFNDLRYTVNSEALKQ-LGWREIVSWEDGLHKTVEWY 331
>gi|239627258|ref|ZP_04670289.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517404|gb|EEQ57270.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 339
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 34 KQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENF------ 76
+Q+++ISSA Y KP + P+ E K DA + ++ Y + F
Sbjct: 89 RQYIYISSASAYQKPVSDYRITESTPLANPYWEYSRQKIDAENALMDAYRRDGFPVTIVR 148
Query: 77 ---SNWASFRPQYMIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
++ P G+ N W RI+ +PV IPG G + H D +
Sbjct: 149 PSHTHCGKKPPVTPHGAKGN-----WQVLKRILDGKPVIIPGDGTSLWTVTHASDFAKGY 203
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A + F++ +D ++T + + + A A G+P++ VH
Sbjct: 204 VGLMGNPHAIGHS-FHITTDESMTWNQIYETIADAMGMPLKAVH 246
>gi|407705605|ref|YP_006829190.1| C4-dicarboxylate anaerobic carrier [Bacillus thuringiensis MC28]
gi|407383290|gb|AFU13791.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus thuringiensis MC28]
Length = 328
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 86 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|118478511|ref|YP_895662.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus thuringiensis str. Al Hakam]
gi|196042963|ref|ZP_03110202.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus 03BB108]
gi|225865160|ref|YP_002750538.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus 03BB102]
gi|376267079|ref|YP_005119791.1| Nucleoside-diphosphate-sugar epimerase [Bacillus cereus F837/76]
gi|118417736|gb|ABK86155.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus thuringiensis str. Al Hakam]
gi|196026447|gb|EDX65115.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus 03BB108]
gi|225788004|gb|ACO28221.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus 03BB102]
gi|364512879|gb|AEW56278.1| Nucleoside-diphosphate-sugar epimerase [Bacillus cereus F837/76]
Length = 328
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 86 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDHAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|421489319|ref|ZP_15936701.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK304]
gi|400365951|gb|EJP18993.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK304]
Length = 326
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 101/238 (42%), Gaps = 40/238 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V + + +G+++ +++SS IY P D+ EG+ + + ++ YI ++ F
Sbjct: 96 VLEACQETGIQRLVYVSSPSIYAAPRDQLAIKEGEAPQEN----KLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ ++ +K +P+ G G Q ++ V +++
Sbjct: 152 EDYPDVPSIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAF 190
+ LA+E P+ AS ++N+ + + + + G P+ P + I + F
Sbjct: 210 IRLALEAPQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLLSVIASSLEF 268
Query: 191 PFRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 229
+R + EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 269 LYRVLKLKGEPALTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|228934482|ref|ZP_04097317.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228825119|gb|EEM70916.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 326
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 84 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 143
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 144 AEQAIDHAFAYGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 201
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 202 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 234
>gi|301101235|ref|XP_002899706.1| dTDP-D-glucose 4,6-dehydratase, putative [Phytophthora infestans
T30-4]
gi|262102708|gb|EEY60760.1| dTDP-D-glucose 4,6-dehydratase, putative [Phytophthora infestans
T30-4]
Length = 421
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 28 AKSSGVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVE---KYISENFSNWASF 82
A+ G+K+F+ +S+ +Y D E V++P + + +++ ++F SF
Sbjct: 187 ARLYGIKRFIHVSTDEVYGEGRPDSARMTEDHVLEPTNPYAATKAGAEFLVKSFHR--SF 244
Query: 83 RPQYMIGSGNNKDCEEWF--------FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+I NN + ++I+R RPV I G GM N ++ D+ + L
Sbjct: 245 GLPTIITRSNNVYGPHQYPEKLVPKIINQILRDRPVTIHGDGMHTRNYLYISDVVAAFDL 304
Query: 135 AVENPEAASSNIFNL-----VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 189
+ E ++N+ +S+R V +D +A + Q G KA I +
Sbjct: 305 ILH--EGKVGEVYNIGGENELSNRLVAMDLLAMMKPQLVGA--------DKAILITHVQD 354
Query: 190 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILES 248
PF N H Y A LGW E L++ + + + G +F+ D LE+
Sbjct: 355 RPF-NDHRYVIDSAKIRRLGWNEKVTWREGLRKTVKWFCRYGH-----RFDNIDHALEA 407
>gi|229092196|ref|ZP_04223377.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
Rock3-42]
gi|228691187|gb|EEL44951.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
Rock3-42]
Length = 326
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 84 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 143
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 144 AEQAIDHAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 201
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 202 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 234
>gi|49478089|ref|YP_037324.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|49329645|gb|AAT60291.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 328
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 86 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDHAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|300781371|ref|ZP_07091225.1| UDP-glucose 4-epimerase [Corynebacterium genitalium ATCC 33030]
gi|300533078|gb|EFK54139.1| UDP-glucose 4-epimerase [Corynebacterium genitalium ATCC 33030]
Length = 309
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 37/223 (16%)
Query: 24 VADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPD----AGHVQVEKYIS---EN 75
VA+ A+ +GV++ + SS G IY E P E V P A + E+Y+
Sbjct: 101 VAEAARKAGVRKIVHTSSGGSIYGTPSEFPVDESFPVDPHSPYAASKLAGEQYLGIYRHL 160
Query: 76 FSNWASF-RPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
+ ASF P + G N E F + ++ RP I G G + +V D++
Sbjct: 161 YGMQASFIAPANVYGPRQNPHGEAGVVAIFSENLLHGRPTKIFGGGTNTRDYVYVGDVAR 220
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
LA E FN+ + T + L A+ AG P DA + F
Sbjct: 221 AFVLAAG--ERGDGVRFNIGTSVETTDRELHTLVAKHAGAP-------------DAPQNF 265
Query: 191 PFRNMHFYAEPRAA------KDILGWRSTTNLPEDLKERFEEY 227
P R PR+A K+ILGW T +L E + +++
Sbjct: 266 PPR---LGDVPRSALSAARAKEILGWEPTVSLDEGVARTVDDF 305
>gi|229122755|ref|ZP_04251964.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
95/8201]
gi|228660619|gb|EEL16250.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
95/8201]
Length = 306
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 64 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 123
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 124 AEQAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 181
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 182 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 214
>gi|30263172|ref|NP_845549.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Ames]
gi|47528537|ref|YP_019886.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus anthracis
str. 'Ames Ancestor']
gi|49186021|ref|YP_029273.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus anthracis
str. Sterne]
gi|65320500|ref|ZP_00393459.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Bacillus
anthracis str. A2012]
gi|165868985|ref|ZP_02213645.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0488]
gi|167632587|ref|ZP_02390914.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0442]
gi|167637345|ref|ZP_02395625.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0193]
gi|170684995|ref|ZP_02876220.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0465]
gi|170705185|ref|ZP_02895650.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0389]
gi|177650008|ref|ZP_02933009.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0174]
gi|190564869|ref|ZP_03017790.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Tsiankovskii-I]
gi|227813963|ref|YP_002813972.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. CDC 684]
gi|229604184|ref|YP_002867437.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0248]
gi|254685779|ref|ZP_05149638.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. CNEVA-9066]
gi|254723186|ref|ZP_05184974.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A1055]
gi|254738249|ref|ZP_05195952.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Western North America USA6153]
gi|254742583|ref|ZP_05200268.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Kruger B]
gi|254752564|ref|ZP_05204600.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Vollum]
gi|254761080|ref|ZP_05213104.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Australia 94]
gi|386736967|ref|YP_006210148.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. H9401]
gi|421510197|ref|ZP_15957094.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. UR-1]
gi|421636826|ref|ZP_16077424.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. BF1]
gi|30257806|gb|AAP27035.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Ames]
gi|47503685|gb|AAT32361.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49179948|gb|AAT55324.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Sterne]
gi|164715711|gb|EDR21228.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0488]
gi|167514852|gb|EDR90218.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0193]
gi|167532885|gb|EDR95521.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0442]
gi|170130040|gb|EDS98902.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0389]
gi|170671255|gb|EDT21993.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0465]
gi|172083960|gb|EDT69019.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0174]
gi|190564186|gb|EDV18150.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. Tsiankovskii-I]
gi|227006746|gb|ACP16489.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. CDC 684]
gi|229268592|gb|ACQ50229.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. A0248]
gi|384386819|gb|AFH84480.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. H9401]
gi|401819787|gb|EJT18960.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. UR-1]
gi|403395622|gb|EJY92860.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus anthracis str. BF1]
Length = 328
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 86 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|147679101|ref|YP_001213316.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum
thermopropionicum SI]
gi|146275198|dbj|BAF60947.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum
thermopropionicum SI]
Length = 314
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F DR+++ P I G G Q + VRD++ A+ + + N+ + RA +++
Sbjct: 187 FIDRLLKGEPPSIFGDGEQTRDFVFVRDVALANVAALHGGDGM---VLNVGTGRATSVND 243
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+ + + G P+E ++ P+ I H Y + +LGW + +L +
Sbjct: 244 LFREIKKITGSPLEALYCPPRPGDI----------THSYLANGRIRRVLGWNPSCSLEDG 293
Query: 220 LKERFEEYVKI 230
L+E Y K+
Sbjct: 294 LRETVGHYRKV 304
>gi|300782135|ref|YP_003762426.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32]
gi|384145340|ref|YP_005528156.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei S699]
gi|399534017|ref|YP_006546679.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei S699]
gi|299791649|gb|ADJ42024.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32]
gi|340523494|gb|AEK38699.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei S699]
gi|398314787|gb|AFO73734.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei S699]
Length = 309
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNW 79
A GV++ +F S+A +Y P E D ++P AG + Y + +W
Sbjct: 109 AADEGVERLVFASTASVYGDPKRLPMHEDDELRPLTPYCISKRAGEDLLGFYERQKGLSW 168
Query: 80 ASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ R + G G + F R+ +P I G G Q + HV DL+ +
Sbjct: 169 NALRFFNVYGPGQKIEAYYTSVINHFIQRLRAGQPPIIDGRGDQSMDFVHVTDLAKAVVA 228
Query: 135 AVENPEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
A+E+ A N+ N+ + ++ +AK+ +A G+ VE + + + +++A
Sbjct: 229 ALESERA---NLPINIGTGIDTSIAALAKILIEAVGVDVEPLFNERDV--LVSRRA---- 279
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 226
A+ A+D+LGW + + +++ E
Sbjct: 280 -----ADISRARDVLGWEPRITVEDGMRDLVRE 307
>gi|325289029|ref|YP_004265210.1| sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
[Syntrophobotulus glycolicus DSM 8271]
gi|324964430|gb|ADY55209.1| Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
[Syntrophobotulus glycolicus DSM 8271]
Length = 329
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV----EKYISENFSNW---A 80
++ +G+K FL+IS+AG++ + P E P + Q E+YIS+
Sbjct: 102 SEMAGIKHFLYISTAGVFGRLKQIPADETHPCSPRYPYEQTKFRAEQYISQKIREGFPAT 161
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
RP ++ G G+ +++ P+ G G F ++ DL L L + +
Sbjct: 162 IIRPSHIYGPGDLNMVP--LLKILLKFHLFPLIGGGKSFFQPLYIDDLLKGLILVIGHRN 219
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGL 170
++ L A T +L A+ G+
Sbjct: 220 TVCGKLYVLAGKEATTFRQYIQLSAKLMGI 249
>gi|229151401|ref|ZP_04279604.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
m1550]
gi|228631944|gb|EEK88570.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
m1550]
Length = 326
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 84 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 143
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 144 AEQAIDQAFAQGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 201
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 202 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 234
>gi|186682745|ref|YP_001865941.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102]
gi|186465197|gb|ACC80998.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102]
Length = 315
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 14 TNNNFRLQRPVADWAK-SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
T N + + + AK + +K+ +F SS+ +Y A+ P EG +P + + + K
Sbjct: 99 TERNINATQVLLEAAKDAKHLKRLVFASSSSVYGDAETLPTHEGICPEPVSPY-GITKLA 157
Query: 73 SENFSN---------WASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNI 122
+E + S R + G D FF I++ +PI G G Q
Sbjct: 158 AETLCRLYHKNFGVPYVSLRYFTVYGPKQRPDMAFHKFFKSILQDEAIPIYGDGQQTREF 217
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
V D+ + A P+A IFN+ V L + + G P++ H + KA
Sbjct: 218 TFVGDIVAANLAAASTPQAV-GEIFNIGGGSRVVLAEVLDTIEEIVGKPIKRNHIE-KAM 275
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
G DA+ H A+ A+ ILG++ +L + L + +
Sbjct: 276 G-DAR--------HTAADVSKAQKILGYQPQVSLRDGLTQEW 308
>gi|365859313|ref|ZP_09399183.1| NAD dependent epimerase/dehydratase family protein
[Acetobacteraceae bacterium AT-5844]
gi|363712672|gb|EHL96349.1| NAD dependent epimerase/dehydratase family protein
[Acetobacteraceae bacterium AT-5844]
Length = 332
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F DR++R V + G G Q + +V D+ ML LA + S+ ++N+ + + ++
Sbjct: 195 FCDRLLRGEAVDVFGDGQQTRDFVYVGDVVRML-LAAMPAASVSAPVYNVCTGKPTSVLE 253
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A A+ G +E+ H P+A I H +P A LG + T+L +
Sbjct: 254 LAATVAELCGTALEVRHQPPRAGEIR----------HSLGQPALASWKLGVEAATSLRQG 303
Query: 220 LKERF 224
L E
Sbjct: 304 LAETL 308
>gi|386716977|ref|YP_006183303.1| UDP-glucose 4-epimerase [Stenotrophomonas maltophilia D457]
gi|384076539|emb|CCH11120.1| UDP-glucose 4-epimerase [Stenotrophomonas maltophilia D457]
Length = 306
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 32 GVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGH----VQVEKYIS----ENFSNWASF 82
GV++ + SS G +Y D P E ++P + + V +E Y++ + + +
Sbjct: 105 GVRRLCYFSSGGTVYGNPDTLPVPETHALRPISSYGIVKVAIEHYLTMFQRQGWLDPVII 164
Query: 83 RPQYMIGSGNN----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
RP G G + + F R + PV I G G + + DL + LA E+
Sbjct: 165 RPSNPYGPGQSTRGIQGAVAVFLGRALAGLPVEIWGDGETVRDYVFIDDLIDLALLATES 224
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAG--LPVEIVHYDPKAAGIDAKKAFPFRNMH 196
+ +FN S ++L+ + A+G LPV+ Y P + F R++
Sbjct: 225 ---GRTGVFNAASGNGISLNELCAAIRVASGRALPVQ---YKP-------GRTFDVRSIV 271
Query: 197 FYAEPRAAKDILGWRSTTNLPEDL 220
+ + AK +LGW L E L
Sbjct: 272 L--DVQRAKQLLGWTPKIALAEGL 293
>gi|380695552|ref|ZP_09860411.1| mRNA-binding protein [Bacteroides faecis MAJ27]
Length = 338
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 33 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
KQ++FISSA Y KP + P+ + K A V + Y + F
Sbjct: 88 TKQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRHKIAAEEVLMAAYRTTGFPV-TI 146
Query: 82 FRPQYMIGS--------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
RP + GNN + + RI+ +PV IPG G + H RD +
Sbjct: 147 VRPSHTYNGTKPPVSLHGNNGNWQ--ILKRILDGKPVIIPGDGSSLWTLTHSRDFAKGYV 204
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N F++ +D ++T + + + A A P+ +H
Sbjct: 205 GLMANPHAI-GNAFHITTDESMTWNQIYQTIADALEKPLNALH 246
>gi|398354940|ref|YP_006400404.1| UDP-glucose 4-epimerase [Sinorhizobium fredii USDA 257]
gi|390130266|gb|AFL53647.1| putative UDP-glucose 4-epimerase [Sinorhizobium fredii USDA 257]
Length = 368
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R+ +P + G Q + HVRD++ L +E P+AA ++ N+ S A +
Sbjct: 227 FASRLANGQPPMVFEDGRQRRDFVHVRDVARAFRLVLEQPQAA-GHVINVGSGNAYAIAD 285
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A L A+A G+P + +P+ ++ ++ RN +A+ A+D+LG++ L +
Sbjct: 286 VACLLAEAMGVP----NLEPEI--MNKARSGDIRNC--FADISKARDLLGFQPAHRLEDS 337
Query: 220 LKE 222
L E
Sbjct: 338 LAE 340
>gi|298385502|ref|ZP_06995060.1| mRNA-binding protein [Bacteroides sp. 1_1_14]
gi|298261643|gb|EFI04509.1| mRNA-binding protein [Bacteroides sp. 1_1_14]
Length = 338
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 33 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
KQ++FISSA Y KP + P+ + K A V + Y + F
Sbjct: 88 TKQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRHKIAAEEVLMTAYRTSGFP-ITI 146
Query: 82 FRPQYMIGS--------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
RP + GN + + RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSLHGNKGNWQ--ILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYV 204
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 205 GLMANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|338814310|ref|ZP_08626331.1| GDP-fucose synthetase [Acetonema longum DSM 6540]
gi|337273632|gb|EGO62248.1| GDP-fucose synthetase [Acetonema longum DSM 6540]
Length = 309
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 36/235 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEP--------PHVEGDVVKPDA 63
N ++ + A + VK+ LF+ S+ IY +P +E P E + A
Sbjct: 84 NLIMESNIIHAAYQNEVKKLLFLGSSCIYPKMALQPLNEEYLLTGPLEPTNEWYAIAKIA 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G + Y + N+ S P + G +N D E ++RK V +
Sbjct: 144 GIKLCQAYRRQYGCNFISVMPTNLYGPNDNFDMETSHVLPALIRKFHEAKHKGDTSVSVW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
GSG V DL+ ++ E I N+ + +T+ +A + A+ G +
Sbjct: 204 GSGTPRREFLFVDDLADACCFVMDQYEG--EQIVNIGTGTDITIADLAAIIAEITGFVGK 261
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
IV+ K G K+ + + LGW++TT+L + L E ++ YV
Sbjct: 262 IVYDASKPDGTPVKRLDVTKLSN-----------LGWKATTSLRDGLAETYQWYV 305
>gi|398874798|ref|ZP_10629998.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM74]
gi|398194021|gb|EJM81106.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM74]
Length = 309
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ LF SSA +Y E ++ D K V+K SE
Sbjct: 95 QSNFIGTLNVCEAMRQAGVKRVLFASSAAVYGNNGEGESIDEDTPKAPLTPYAVDKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
+ ++ +R Q+ + G +D F +R ++ P+ + G G Q
Sbjct: 155 QYFDF--YRRQHGLEPVIFRFFNIFGPRQDPSSPYSGVISIFSERALKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHY 177
+ +V DL +L A+E P A + N+ ++A TL M + G LP V Y
Sbjct: 213 TRDFVYVEDLVDLLVQAIEKPLAEVGAV-NVGWNQATTLKQMLEALEAVVGKLPP--VSY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|383456512|ref|YP_005370501.1| UDP-glucose 4-epimerase [Corallococcus coralloides DSM 2259]
gi|380732865|gb|AFE08867.1| UDP-glucose 4-epimerase [Corallococcus coralloides DSM 2259]
Length = 314
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 89/227 (39%), Gaps = 26/227 (11%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKP--------D 62
F + N R + + A+ SGVK+ +F S+ G IY D P E +P
Sbjct: 87 FDADVNIRGMTNLLEAARQSGVKKVIFSSTGGAIYGEQDYFPAREDHPQRPVSPYGVSKA 146
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQ 118
AG + + Y ++ + + R + G N E F R++ + I G G Q
Sbjct: 147 AGELYLGYYRAQYGLPYVALRYANVYGPRQNPHGEAGVVAIFSQRVIAGQGCTIFGEGKQ 206
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
+ D++ LA ++ ++NI V ++ + +L AQA G ++ H
Sbjct: 207 TRDFVFGPDVARANYLAFQSDYVGAANIGTGVE---TDINRLYELIAQAGGSSLKAAHAP 263
Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
K P + + AK +LGW + L E L+ +
Sbjct: 264 GK----------PGEQLRSCIDAAHAKKVLGWEPSVQLAEGLRHTIQ 300
>gi|229185434|ref|ZP_04312616.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus BGSC
6E1]
gi|228598022|gb|EEK55660.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus BGSC
6E1]
Length = 326
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + +K G+K+ + +S+ IY DE +V + PD H K++
Sbjct: 84 NANVLGTKHIIEGSKKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHM 143
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 144 AEQAIDQAFVHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 201
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D V L
Sbjct: 202 VENVVDALLLCMHSPKHTLGKKYNITNDERVNL 234
>gi|322368741|ref|ZP_08043308.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus
DX253]
gi|320551472|gb|EFW93119.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus
DX253]
Length = 315
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 37/209 (17%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---- 90
+ + SSA +Y D P VE + +P + + ++K ++ ++ F Y I +
Sbjct: 122 RVVLASSAAVYGHPDAVPVVESEHKRPTSPY-GIDKLTADQYARR--FSDLYGIETVTLR 178
Query: 91 -----GNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
G ++ E F D+ R + I G G Q + HV D+ N
Sbjct: 179 YFNVYGPRQNPEYSAVVRTFLDQARRGEDITIQGDGTQTRDFVHVDDVVQA------NCR 232
Query: 141 AASSN----IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 196
AA+++ FN+ + +VT+ +A+ +IVH DP+ ID H
Sbjct: 233 AATTDRTGEAFNVGTGESVTIRELAETIRSVTDSSSDIVHTDPRPGDID----------H 282
Query: 197 FYAEPRAAKDILGWRSTTNLPEDLKERFE 225
A+ A+ LG+ T +L + L E E
Sbjct: 283 SRADITKARTALGYEPTVSLSDGLAELVE 311
>gi|417940628|ref|ZP_12583916.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK313]
gi|343389509|gb|EGV02094.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK313]
Length = 326
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 98/237 (41%), Gaps = 38/237 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V D + +G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 96 VLDACREAGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ ++ +K +P+ G G Q ++ V +++
Sbjct: 152 KDYPDVPSIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAF 190
+ LA+E P+ AS ++N+ + + + + G P+ P + I + F
Sbjct: 210 IRLALEAPQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLISVIASSLEF 268
Query: 191 PFRNMHFYAEPRAAK------------DI------LGWRSTTNLPEDLKERFEEYVK 229
++ + EP + DI LG+R ++ E +++ ++Y K
Sbjct: 269 LYKTLKLKGEPALTRYTYYLLRYSQTLDISKAELDLGYRPQISISEGIEQYVQDYRK 325
>gi|229088322|ref|ZP_04220172.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
Rock3-44]
gi|228694998|gb|EEL48124.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
Rock3-44]
Length = 326
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 5 YAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA- 63
+ K+K + N N + + + ++ SG+K+ + +S+ IY DE V + PD
Sbjct: 76 WGKYKDFY--NANVLGTKHIIEGSQKSGIKRLIHVSTPSIYFYYDERQDVVENAKLPDTF 133
Query: 64 -GHVQVEKYISENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPG 114
H KY++E ++ A + RP+ + G G+N ++ K +P G
Sbjct: 134 VNHYAKTKYMAEQATDQAFNHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIG 191
Query: 115 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
+ +I +V ++ L L + +P+ +N+ + + L
Sbjct: 192 TEDVLVDITYVENVVDALLLCMHSPKHTLGQKYNITNGERINL 234
>gi|29346140|ref|NP_809643.1| mRNA-binding protein [Bacteroides thetaiotaomicron VPI-5482]
gi|383122401|ref|ZP_09943094.1| hypothetical protein BSIG_0861 [Bacteroides sp. 1_1_6]
gi|29338034|gb|AAO75837.1| putative mRNA-binding protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842508|gb|EES70588.1| hypothetical protein BSIG_0861 [Bacteroides sp. 1_1_6]
Length = 338
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 33 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
KQ++FISSA Y KP + P+ + K A V + Y + F
Sbjct: 88 TKQYIFISSASAYQKPLADYRITESTPLVNPYWQYSRHKIAAEEVLMTAYRTTGFP-ITI 146
Query: 82 FRPQYMIGS--------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
RP + GN + + RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSLHGNKGNWQ--ILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYV 204
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 205 GLMANPHAI-GNAFHITTDESMTWNQIYQTIADALGKPLNALH 246
>gi|322370967|ref|ZP_08045520.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus
DX253]
gi|320549402|gb|EFW91063.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus
DX253]
Length = 323
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 82 FRPQYMIGSG-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
P +++G G N D + F R+ R + V +P G++ + H D++
Sbjct: 156 LHPGHIVGPGWEPVNPAGNFDTD--VFSRLARGKEVALPNFGLETVHHVHADDVAQGFQR 213
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCA 165
A+EN AA F++VS RA+TL G A+ A
Sbjct: 214 ALENWSAAVGESFHVVSPRALTLRGYAEAVA 244
>gi|384099636|ref|ZP_10000721.1| UDP-glucose 4-epimerase [Imtechella halotolerans K1]
gi|383832543|gb|EID72015.1| UDP-glucose 4-epimerase [Imtechella halotolerans K1]
Length = 323
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQY- 86
++ +G+K+F++ +S+ Y ++ P VE + KP + + V KY++E +++ F Y
Sbjct: 109 SRDAGIKRFVYAASSSTYGDSESLPKVENVIGKPLSPYA-VTKYVNELYAD--VFSKTYG 165
Query: 87 --MIG-------------SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
+IG +G F ++++ I G+G + ++ ++ M
Sbjct: 166 MELIGLRYFNVFGRRQDPNGAYAAVIPLFVKQLMKHEAPTINGAGDYSRDFTYIDNVIQM 225
Query: 132 --LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 189
L + ENPEA ++ V DR +D + L + + EI + +P G +
Sbjct: 226 NELAMLTENPEAINTVYNTAVGDRTTLVDLVDYLKSYLSEYDSEIANINP-IHGPNRVGD 284
Query: 190 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
P H A A +LG+ T + + LKE + Y
Sbjct: 285 IP----HSLASIEKASKLLGYYPTHTIDKGLKEAVQWY 318
>gi|427717553|ref|YP_007065547.1| UDP-glucuronate 4-epimerase [Calothrix sp. PCC 7507]
gi|427349989|gb|AFY32713.1| UDP-glucuronate 4-epimerase [Calothrix sp. PCC 7507]
Length = 315
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 23/223 (10%)
Query: 14 TNNNFRLQRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
T N + + + AK++ G+K+ +F S++ +Y A+ P EG P + + + K
Sbjct: 99 TERNLNATQILLEAAKNAKGLKRLVFASTSSVYGDAETLPTHEGICPLPVSPY-GITKLA 157
Query: 73 SENFSN---------WASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNI 122
+E + + R + G D FF I++ +PI G G Q +
Sbjct: 158 AERLCGLYHKNFGVPFVALRYFTVYGPRQRPDMAFHKFFKAILQDEAIPIYGDGQQTRDF 217
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
+ D + A PEA IFN+ V L + + G P++ H + KA
Sbjct: 218 TFISDAVAANLAAATVPEAV-GEIFNIGGGSRVVLKEVLDTIEEIVGKPIKRNHIE-KAM 275
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
G DA+ H A+ A+ ILG++ +L + L + +E
Sbjct: 276 G-DAR--------HTAADVSKAQKILGYQPQVSLRDGLTQEWE 309
>gi|15643275|ref|NP_228319.1| UDP-glucose 4-epimerase [Thermotoga maritima MSB8]
gi|418045318|ref|ZP_12683414.1| UDP-glucose 4-epimerase [Thermotoga maritima MSB8]
gi|4981021|gb|AAD35594.1|AE001727_6 UDP-glucose 4-epimerase, putative [Thermotoga maritima MSB8]
gi|351678400|gb|EHA61547.1| UDP-glucose 4-epimerase [Thermotoga maritima MSB8]
Length = 309
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 27/212 (12%)
Query: 32 GVKQFLFISSAG-IY--------KPADEPPH-VEGDVVKPDAGHVQVEKYISENFSNWAS 81
GVK+F+F S+ G IY P E PH + + + + +E + E +
Sbjct: 108 GVKKFIFSSTGGAIYGENVKVFPTPETEIPHPISPYGIAKYSTEMYLEFFAREYGLKYTV 167
Query: 82 FRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
R + G + E F +R++R V I G G + +V D+ LA+E
Sbjct: 168 LRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAME 227
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 197
+ +FN+ + R T++ + KL + G E V+ P+ D +K+
Sbjct: 228 K---GDNEVFNIGTGRGTTVNQLFKLLKEITGYDKEPVYKPPRKG--DVRKSI------- 275
Query: 198 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+ AK+ LGW +L E LK E + K
Sbjct: 276 -LDYTKAKEKLGWEPKVSLEEGLKLTVEYFRK 306
>gi|269837187|ref|YP_003319415.1| NAD-dependent epimerase/dehydratase [Sphaerobacter thermophilus DSM
20745]
gi|269786450|gb|ACZ38593.1| NAD-dependent epimerase/dehydratase [Sphaerobacter thermophilus DSM
20745]
Length = 319
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R +R P+PI G G Q ++ +V DL L LA+E E A + NL + T+
Sbjct: 189 FIMRALRGEPLPIFGDGSQTRSLCYVSDLVRGLILAMERDE-ARGQVINLGNPDERTVLE 247
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A++ P E+ + + D ++ P + A+ +LGW T ++ +
Sbjct: 248 LAQIILDLCDSPSEVEFLEKRPD--DPERRCP--------DITRARTLLGWEPTVSIDDG 297
Query: 220 LKERFEEYVK-IGRDKKAM 237
L+E + + +G+D +A+
Sbjct: 298 LRETIAYFRRYVGQDPRAI 316
>gi|428298238|ref|YP_007136544.1| UDP-glucuronate 4-epimerase [Calothrix sp. PCC 6303]
gi|428234782|gb|AFZ00572.1| UDP-glucuronate 4-epimerase [Calothrix sp. PCC 6303]
Length = 315
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 23/223 (10%)
Query: 14 TNNNFRLQRPVADWAK-SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
T N + + + AK ++ +K+ +F SS+ +Y A+ P EG P + + + K
Sbjct: 99 TERNINATQILLEAAKDATTLKRLVFASSSSVYGDAETFPTHEGICPAPVSPY-GITKLA 157
Query: 73 SENFSN---------WASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNI 122
+E+ + + R + G D FF ++ + +P+ G G Q +
Sbjct: 158 AESLCGLYYKNFGVPFVALRYFTVYGPRQRPDMAFHKFFKAVIEDQAIPVFGDGEQTRDF 217
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
+V D + A PEA IFN+ V L + + Q G P++ D +A
Sbjct: 218 TYVSDAVAANLAAATIPEAV-GQIFNIGGGSRVILSEVLNMMEQIVGKPIKRNFID-RAI 275
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
G DA+ H A+ A+ +LGW+ +L E L + ++
Sbjct: 276 G-DAR--------HTGADIFKAQKLLGWQPQVSLREGLSQEWQ 309
>gi|395801742|ref|ZP_10480997.1| GDP-fucose synthetase [Flavobacterium sp. F52]
gi|395435931|gb|EJG01870.1| GDP-fucose synthetase [Flavobacterium sp. F52]
Length = 316
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 103/237 (43%), Gaps = 38/237 (16%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP---PHVEGDVVKPD---------A 63
N ++Q + D A SGV++F+F+ S+ IY K A +P ++ D ++P A
Sbjct: 84 NLQIQNNLMDSALKSGVEKFIFLGSSCIYPKLAPQPLKEEYLLTDTLEPTNEWYAIAKIA 143
Query: 64 GHVQVEKYISENFS-NWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
G ++V + I + FS ++ S P + G+ +N D ++RK V +
Sbjct: 144 G-IKVCEAIKKQFSKDYVSLMPTNLYGTHDNFDLNTSHVLPAMIRKFHEAKLNNHESVTL 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G V D++ + A+EN S ++N+ + +T+ +A++ G
Sbjct: 203 WGTGTPMREFLFVDDMAEAVVFALENRLPDS--LYNVGTGVDLTIKDLAEIIQNIVGHNG 260
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+I+ K G +K MH LGW+ E +++ + +++
Sbjct: 261 DIIWDTTKPDGT-PRKLMDVSKMH----------ALGWQHQVKFEEGIRKTYNWFLE 306
>gi|299068339|emb|CBJ39563.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
CMR15]
Length = 334
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 20 LQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW 79
L R V D + GVK+ L +S+ G PA + K D E+ ++++ +W
Sbjct: 115 LPRRVVDACRRHGVKRLLHMSALGA-DPAGPSMYQRS---KGDG-----ERIVTDSGLDW 165
Query: 80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
FRP + G G D F R+ R P VP+ + +F + +V D++ A++N
Sbjct: 166 TVFRPSVVFGPG---DHFLNLFARLQRLAPFVPLARAEARFQPV-YVDDVAVAFAHALDN 221
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
P A +++ LV R TL + + A+G P IV
Sbjct: 222 P-ATFGHVYPLVGPRVYTLAELVRFAGTASGHPRWIV 257
>gi|229818903|ref|YP_002880429.1| NAD-dependent epimerase/dehydratase [Beutenbergia cavernae DSM
12333]
gi|229564816|gb|ACQ78667.1| NAD-dependent epimerase/dehydratase [Beutenbergia cavernae DSM
12333]
Length = 342
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 12/148 (8%)
Query: 33 VKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISENF--SNWAS-------F 82
V Q+++ISSA Y KP + P E +K K SE W
Sbjct: 106 VGQYVYISSASAYAKPVEHLPITESTPLKNPFWQYSRNKIASEEVLVRAWRERDFPATIV 165
Query: 83 RPQYMIGSGNNKDCEEWF-FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
RP + + W DR+ R PVP+ G G + H RD + + +
Sbjct: 166 RPSHTYDERSIPIPGRWTAIDRLRRGAPVPVVGDGTSLWTLTHTRDFAVAF-VGLLGDRR 224
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAG 169
A + F++ SD ++T + ++ A+AAG
Sbjct: 225 AVGDTFHITSDESLTWAQITRILARAAG 252
>gi|331267149|ref|YP_004326779.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus oralis
Uo5]
gi|326683821|emb|CBZ01439.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Streptococcus
oralis Uo5]
Length = 326
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 98/238 (41%), Gaps = 40/238 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V D + +G+++ +++SS IY P D+ E + + + YI ++ F
Sbjct: 96 VLDACRETGIQRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ ++ +K +P+ G G Q ++ V +++
Sbjct: 152 KDYPDVPSIILRPRGIFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAF 190
+ LA+E P+ AS ++N+ + + + + G P+ P + I + F
Sbjct: 210 IRLALEAPQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLLSAIASTLEF 268
Query: 191 PFRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 229
++ +H EP +A +D LG+R ++ E +++ +Y K
Sbjct: 269 IYKILHLKGEPPLTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVRDYRK 325
>gi|16263983|ref|NP_436775.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti 1021]
gi|384533864|ref|YP_005716528.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti BL225C]
gi|384539615|ref|YP_005723699.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti SM11]
gi|433611593|ref|YP_007195054.1| Nucleoside-diphosphate-sugar epimerase [Sinorhizobium meliloti GR4]
gi|15140107|emb|CAC48635.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti 1021]
gi|333816040|gb|AEG08707.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti BL225C]
gi|336038268|gb|AEH84198.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti SM11]
gi|429556535|gb|AGA11455.1| Nucleoside-diphosphate-sugar epimerase [Sinorhizobium meliloti GR4]
Length = 368
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G Q + HVRD++ LA+E P AA ++ N+ S A + +A L A+A G+P
Sbjct: 243 GRQKRDFVHVRDVARAFRLALEQPHAA-GHVINIGSGNAYAIADIASLLAEAMGVP---- 297
Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
D + I+ ++ RN +A+ A+D+LG+ L + L + F ++V+
Sbjct: 298 --DIEPEIINKARSGDIRNC--FADIAKARDLLGFEPAHRLEDSLAD-FAQWVR 346
>gi|114566248|ref|YP_753402.1| nucleotide sugar epimerase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337183|gb|ABI68031.1| nucleotide sugar epimerase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 323
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDV---VKPDAGHVQVEKYISENFS-----NW 79
K GV++F+ S++ +Y + P E V + P A + + ++ + +
Sbjct: 115 CKEFGVRKFVLASTSSLYAGQEMPFKEELPVNTPISPYAASKKAAEMMAYTYHYLYGLDI 174
Query: 80 ASFRPQYMIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
FR + G D + F I+ P+ + G G Q + +V D++ L ++
Sbjct: 175 TVFRYFTVYGPAGRPDMSIFRFIKWIMEGTPLQVFGDGSQRRDFTYVDDIARGTVLGLK- 233
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 198
I NL + TL +L + G EI + + A I A +
Sbjct: 234 --PMGYEIINLGNSNPDTLSKTIELIEEYTGKKTEIQYKEFHKADISAT----------W 281
Query: 199 AEPRAAKDILGWRSTTNLPEDLKERFE 225
A A+++LGW++ TNLPE +K +
Sbjct: 282 ANISKAQNLLGWQAKTNLPEGIKRTVQ 308
>gi|428206243|ref|YP_007090596.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
gi|428008164|gb|AFY86727.1| NAD-dependent epimerase/dehydratase [Chroococcidiopsis thermalis
PCC 7203]
Length = 325
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 30 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SENFSNWAS 81
++GVK+F+F+SS G + + P E +PD + +Q E+ I S++ W
Sbjct: 105 AAGVKRFVFVSSIGAMTSSSDRPLTESSPCQPDTPYGRSKLQAEQAIVQLASQSAMTWTI 164
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPE 140
RP + G+GN + E ++V+ +P+P G+ ++ +V +L + + +P+
Sbjct: 165 LRPPLVYGAGNPGNMERLI--KLVQTG-LPLPFGAVKNRRSLIYVGNLVDAIASTLNHPQ 221
Query: 141 AASSNIFNLVSD 152
AA+ LVSD
Sbjct: 222 AANQTF--LVSD 231
>gi|372211021|ref|ZP_09498823.1| GDP-fucose synthetase [Flavobacteriaceae bacterium S85]
Length = 316
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 40/238 (16%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP---PHVEGDVVKPD--------AG 64
N ++Q + D A V++F+F+ S+ IY K A +P H+ D ++P
Sbjct: 84 NMQIQNNLIDAANKYDVQKFIFLGSSCIYPKFAPQPLKEEHLLTDSLEPTNEWYAIAKIT 143
Query: 65 HVQVEKYISENFS-NWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
V+ + I + + ++ S P + G+ +N D + ++RK PV +
Sbjct: 144 GVKACQAIRKQYGKDFVSLMPTNLYGTHDNFDLKTSHVLPAMIRKFHEAKENGHTPVTLW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
GSG V D++ + A+EN PE ++N+ + +T+ +A+ +A G
Sbjct: 204 GSGTPMREFLFVDDMARSVIFALENVLPEY----LYNVGTGVDLTIKELAETIQKAVGHT 259
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
EI+ K G +K MH LGW+ L E +++ ++ +++
Sbjct: 260 GEIIWDSSKPDGT-PRKLMDISKMH----------ALGWKHQVELQEGIEKTYQWFLE 306
>gi|222056005|ref|YP_002538367.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
gi|221565294|gb|ACM21266.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
Length = 328
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----KPDAGHVQVEKYI 72
N R + + AK+ GV+ FLF SS+ +Y + P E D V P A + + I
Sbjct: 108 NVRGTMNLLEAAKAIGVRLFLFASSSSVYGNNPKVPFAEADPVDNPISPYAATKKAGELI 167
Query: 73 SENFS-----NWASFRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVR 126
+ N A R + G D F R++ + +P+P G G + ++
Sbjct: 168 CHTYHHLYDINIACLRFFTVYGPRQRPDLAISKFVRLIEQGKPIPFYGDGSTSRDYTYIG 227
Query: 127 DLSSMLTLAVE--NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
D+ + + A++ N +IFNL V L+ + K+ G ++ P AG
Sbjct: 228 DIVAGIEKALQWVNTGEKRYDIFNLGGSSPVALNRLVKIIEHQLGKKA-VLECLPMQAG- 285
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 220
D ++ F A + +LG++ T + E +
Sbjct: 286 DVERTF--------ANIEKSSSVLGYKPVTPIEEGI 313
>gi|157369477|ref|YP_001477466.1| UDP-glucose 4-epimerase [Serratia proteamaculans 568]
gi|157321241|gb|ABV40338.1| UDP-glucose 4-epimerase [Serratia proteamaculans 568]
Length = 350
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 91/230 (39%), Gaps = 39/230 (16%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
NN V D + +GVKQF+F SSA +Y PA+ P E V K I E
Sbjct: 98 QNNISGSLIVLDRMRHAGVKQFIFSSSATVYGPAEYTPLTENCRVGQTTNPYGTSKLIVE 157
Query: 75 N-FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS------------------ 115
+ +AS PQ I + + ++ + P IP +
Sbjct: 158 QILAEFASTAPQMAITALRYFNPAGAHESGLIGEDPAGIPNNLLAYLAQVAIGKLAVLPV 217
Query: 116 ---------GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 166
G + HV DL+ A++N + N++NL + + ++ + + +
Sbjct: 218 YGNDYPTSDGTGVRDYIHVMDLAEGHLKALDNLQPG-FNVYNLGTGKGYSVLEIIRAFER 276
Query: 167 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL 216
A G + ++P+ AG A+ +++P A + LGW++ +L
Sbjct: 277 ACGFKIA-YQFNPRRAGDIAE---------CWSDPSLAAEKLGWQAKRSL 316
>gi|404329724|ref|ZP_10970172.1| hypothetical protein SvinD2_06476 [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 311
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA----GHVQVEKYI 72
N R V A +G + +F SSA +Y + P P++ + VE Y+
Sbjct: 94 NVRGSLNVIQAAHQAGASRVVFASSAAVYGEPQDLPVTPEQPAAPESPYGLAKLTVESYL 153
Query: 73 S--ENFSNWASFRPQYMIGSGNNKDCE------EWFFDRIVRKRPVPIPGSGMQFTNIAH 124
F + + ++ G +D E F DRI + P I G G Q +
Sbjct: 154 KMFHKFYHLSYSILRFSNVYGPRQDAEGEGGVVSIFADRIRKDTPPMIFGDGNQTRDFIF 213
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
VRD++S + LA+ E A S N+ S ++++ + + + +G P++ Y P+ G
Sbjct: 214 VRDVASAVVLAL---EPAESLCVNVSSGAPLSVNQLFSMMKKVSGSPIQ-PFYGPERDG- 268
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
R+ E AAK +L W+ T+L + L E
Sbjct: 269 ------DIRDSVLSNE--AAKTLLHWKPVTSLYDGLGE 298
>gi|406877374|gb|EKD26619.1| methyltransferase FkbM [uncultured bacterium]
Length = 292
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE--KYISENFSNWAS 81
+ A+ +G+K+ LF+S+ + +K ++ V++E + I ++ NW
Sbjct: 83 IVKSAEEAGIKRALFVSTTAV-----------KTTLKANSKKVRLEAEETIKKSSLNWTI 131
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
RP + G ++++ F + VRK P + IPGSG HV DL+ + A + E
Sbjct: 132 IRPTMIYGGLDDRNIIR--FIKFVRKMPFLIIPGSGEFLQQPVHVEDLAKGIVDAFFS-E 188
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 177
S +NL V+ + M ++ + + ++ H+
Sbjct: 189 NTSYKTYNLSGAFPVSFNQMIQIVSDGLKVKRKVFHF 225
>gi|270291986|ref|ZP_06198201.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. M143]
gi|270279514|gb|EFA25356.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. M143]
Length = 326
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V D + +G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 96 VLDACREAGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ ++ +K +P+ G G Q ++ V +++
Sbjct: 152 KDYPDVPSIILRPRGLFGIGDTSILPRVL--KLSQKVGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD-PKAAGIDAKKAF 190
+ LA+E P+ AS ++N+ + + + + G P+ P + I + F
Sbjct: 210 IRLALEAPQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVSAPLLSVIASSLEF 268
Query: 191 PFRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 229
++ + EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 269 LYKVLKLKGEPALTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|392394625|ref|YP_006431227.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525703|gb|AFM01434.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 324
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS---------N 78
+ + V++ +F S++ +Y + P E D V P + + K+ +E++ +
Sbjct: 103 CREAKVRKLIFTSTSAVYGDLHKEPISEEDPVAP-ISYYGLSKWAAESYILLFHQLYGIS 161
Query: 79 WASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ R + G G E F D I K+ + I G G Q + +V+D+ +
Sbjct: 162 YTILRFSNVYGPGQIAKGEGGVVAVFLDHIHAKKTLNIHGDGAQTRDFVYVKDVVRAIQA 221
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 194
AVE + I + S +++ + + ++ G EI+H P G D K
Sbjct: 222 AVERGD---QEIIQVSSSGKTSVNQLVSMLSRIHGSAFEIIH-TPANQG-DVK------- 269
Query: 195 MHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
H + R A ++L W+ +LP+ L +
Sbjct: 270 -HSCLDNRKAYELLQWQPLIDLPDGLATTY 298
>gi|407724042|ref|YP_006843703.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti Rm41]
gi|407324102|emb|CCM72703.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti Rm41]
Length = 368
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G Q + HVRD++ LA+E P AA ++ N+ S A + +A L A+A G+P
Sbjct: 243 GRQKRDFVHVRDVARAFRLALEQPHAA-GHVINIGSGNAYAIADIASLLAEAMGVP---- 297
Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+P+ I+ ++ RN +A+ A+D+LG+ L + L + F ++V+
Sbjct: 298 EIEPEI--INKARSGDIRNC--FADIAKARDLLGFEPAHRLEDSLAD-FAQWVR 346
>gi|291438346|ref|ZP_06577736.1| NAD-dependent epimerase/dehydratase [Streptomyces ghanaensis ATCC
14672]
gi|291341241|gb|EFE68197.1| NAD-dependent epimerase/dehydratase [Streptomyces ghanaensis ATCC
14672]
Length = 335
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 6 AKFKALFRTNNNFRLQRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
+ F F NN + + A ++G VK F+F SS +Y A++ P E V P+
Sbjct: 78 SHFIKRFNYMNNVVGSVNLINAAVNAGTVKCFVFTSSIAVYG-ANQLPMSEELVPAPEDP 136
Query: 65 H------VQVEKYISENFSN--WASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVP 111
+ V+ E +S + FRP + G N ++ F ++ +R
Sbjct: 137 YGIAKFSVEQELRVSHEMFGLPYVIFRPHNVYGEYQNIGDRYRNVIGIFMNQALRGEEFT 196
Query: 112 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
+ G G Q +++RD++ + +VE P AA + IFN+ D+ +++ +A +A G+
Sbjct: 197 VFGDGEQTRAFSYIRDVAPAIARSVELP-AAYNEIFNIGGDQVYSVNRIAAAVCEAMGVE 255
Query: 172 VEIVH 176
+ + H
Sbjct: 256 LRVNH 260
>gi|78044276|ref|YP_359903.1| hypothetical protein CHY_1057 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996391|gb|ABB15290.1| conserved domain protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 313
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW-------- 79
AK +GVK+ ++ +S+ +Y + P E +P + + V KY E +
Sbjct: 106 AKENGVKRVVYAASSAVYGNNETLPKKEDMYPEPLSPY-AVSKYAGELYLQVFARIYGIE 164
Query: 80 -ASFRPQYMIGSGNNKDCEEW-----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
R + G + + + F D +++ P I G GMQ + + D+
Sbjct: 165 AVGLRYFNVFGPKQDPNSQYAAVIPKFIDALLKGMPPTIYGDGMQTRDFIFIDDVVEANM 224
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
LA+ AS +FN+ ++L+ + K+ + G+ +E V+ + + D + +
Sbjct: 225 LAL-TARGASGKVFNIACGERISLNRLYKVIKEIIGVDIEPVYAEARVG--DVRDSL--- 278
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
A+ A++ILG+ +L E LK+ E
Sbjct: 279 -----ADISLARNILGFEPKVSLEEGLKKTVE 305
>gi|357056438|ref|ZP_09117484.1| hypothetical protein HMPREF9467_04456 [Clostridium clostridioforme
2_1_49FAA]
gi|355380342|gb|EHG27480.1| hypothetical protein HMPREF9467_04456 [Clostridium clostridioforme
2_1_49FAA]
Length = 337
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 19/161 (11%)
Query: 33 VKQFLFISSAGIYK------PADEP-----PHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+Q++FISSA Y+ P E P+ E K DA V Y F
Sbjct: 88 TRQYIFISSASAYQKPMAGCPITESTPLINPYWEYSRKKIDAEEVLTAAYRRNGFPV-TI 146
Query: 82 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
RP + + D W RI+ +P+ IPG G + H D +
Sbjct: 147 VRPSHTYDGKKPPVAIHGDKGNWQILKRILEGKPIIIPGDGTSLWTLTHSTDFARGYVGL 206
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N +++ SD ++T + + + A+A P+ +H
Sbjct: 207 MGNPHAI-GNAYHITSDESMTWNQIYETLAEALDRPLNALH 246
>gi|406974854|gb|EKD97809.1| Isoflavone reductase [uncultured bacterium]
Length = 331
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 21/194 (10%)
Query: 2 EFNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISS----AGIYKPA--DEPPHVE 55
E Y ++ A+ + F A A SS V Q++FISS A + KP ++ P +
Sbjct: 56 ELRYGQWDAVVDCSGYFPAHVASAAKALSSHVGQYIFISSVLQYADLSKPGIREDDPSAQ 115
Query: 56 GDVVKP--------DAGHVQVEKYISENFSNWAS-FRPQYMIGSGNNKDCEEWFFDRIVR 106
G+ + P E+ + + F A+ RP Y++G + + + R
Sbjct: 116 GNFIFPPPLNELTYGPLKAMCEQEVLQVFPGRATILRPGYLVGPRDRSERFPTWVRRASM 175
Query: 107 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV--SDRAVTLDGMAKLC 164
+ +PGSG + VRDL++ + +E ++ IFN+ S R M ++
Sbjct: 176 GGVMLVPGSGNRAWQFIDVRDLAAWIISIIER---RTTGIFNVTGPSCRECAGSLMDRIV 232
Query: 165 AQAAGLPVEIVHYD 178
+ A G P+ I H D
Sbjct: 233 SAAGGSPI-IRHID 245
>gi|433638117|ref|YP_007283877.1| nucleoside-diphosphate-sugar epimerase [Halovivax ruber XH-70]
gi|433289921|gb|AGB15744.1| nucleoside-diphosphate-sugar epimerase [Halovivax ruber XH-70]
Length = 337
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 15/147 (10%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DRI R V +PG G + +V D++S + + E
Sbjct: 153 NAMSVRPPIVYGPHDYTERLDYWIDRIHRFDRVVLPGDGTNLWHRVYVEDVASGMRIVAE 212
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQ--AAGLP-----VEIVHYDPK---AAGIDAK 187
E S +N+ RAVTL GM +L + AA P VE+V + AA + +
Sbjct: 213 EGEPGES--YNVGDQRAVTLRGMLELIDESLAAVDPDHEAGVELVTAGARELAAADLALE 270
Query: 188 KAFPFRN-MHFYAEPRAAKDILGWRST 213
+R+ H + A+ LGW ST
Sbjct: 271 DFVLYRDPPHMLTTEKVAQ--LGWEST 295
>gi|288939982|ref|YP_003442222.1| NAD-dependent epimerase/dehydratase [Allochromatium vinosum DSM
180]
gi|288895354|gb|ADC61190.1| NAD-dependent epimerase/dehydratase [Allochromatium vinosum DSM
180]
Length = 328
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 30/213 (14%)
Query: 28 AKSSGVKQFLFISS---AGIYKP---ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA- 80
A+ +GVK+F+F SS AG +P + PPH V A + E Y S + +
Sbjct: 125 ARLNGVKRFIFASSGAPAGEVEPPIHEELPPH---PVSPYGASKLAGEGYCSAYYRTFGI 181
Query: 81 -----SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
F Y S F + ++ P I G G Q + ++ DL + LA
Sbjct: 182 ETICLRFGNVYGPRSKKKSSVVAKFIRQALQGEPCIIYGDGTQTRDFLYIDDLVRAVMLA 241
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA---GLPVEIVHYDPKAAGIDAKKAFPF 192
+E P + F + + T+ +A L A+A G ++I H P+ D ++ F
Sbjct: 242 MEQPVGGET--FQIATGMERTVGEVATLLAKALEKRGTHMDIQHDSPRLG--DVRRNF-- 295
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
++ A +L WR+ +PE ++ +
Sbjct: 296 ------SDTSKAARLLEWRTEVEVPEGIERTLD 322
>gi|170288229|ref|YP_001738467.1| NAD-dependent epimerase/dehydratase [Thermotoga sp. RQ2]
gi|281411728|ref|YP_003345807.1| NAD-dependent epimerase/dehydratase [Thermotoga naphthophila
RKU-10]
gi|170175732|gb|ACB08784.1| NAD-dependent epimerase/dehydratase [Thermotoga sp. RQ2]
gi|281372831|gb|ADA66393.1| NAD-dependent epimerase/dehydratase [Thermotoga naphthophila
RKU-10]
Length = 309
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 27/212 (12%)
Query: 32 GVKQFLFISSAG-IY--------KPADEPPH-VEGDVVKPDAGHVQVEKYISENFSNWAS 81
GVK+F+F S+ G IY P E PH + + + + +E + E +
Sbjct: 108 GVKKFIFSSTGGAIYGENVKVFPTPETETPHPISPYGIAKYSIEMYLEFFAREYGLKYTV 167
Query: 82 FRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
R + G + E F +R++R V I G G + +V D+ LA+E
Sbjct: 168 LRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAME 227
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 197
+ +FN+ + R T++ + KL + G E V+ P+ D +K+
Sbjct: 228 K---GDNEVFNIGTGRGTTVNQLFKLLKEITGYDKEPVYKPPRKG--DVRKSI------- 275
Query: 198 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+ AK+ LGW +L E LK E + K
Sbjct: 276 -LDYTKAKEKLGWEPKVSLEEGLKLTVEYFRK 306
>gi|448607598|ref|ZP_21659551.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase)
[Haloferax sulfurifontis ATCC BAA-897]
gi|445737535|gb|ELZ89067.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase)
[Haloferax sulfurifontis ATCC BAA-897]
Length = 239
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 14/128 (10%)
Query: 109 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 168
P PI G G Q N +V+D++ L LA EN ++ N R VT++ ++
Sbjct: 112 PFPIWGDGEQTRNFTYVKDITKALRLASENITDGTA--VNAGISRYVTMNEAVEIIFDYL 169
Query: 169 GL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
G P EI + K G+ H A+ A+++LGW + E +K + Y
Sbjct: 170 GWEPDEIDYLTDKPQGV----------RHRAADTSRAEELLGWEPEYTVEEGIKNTLDWY 219
Query: 228 VKIGRDKK 235
V+ RDK+
Sbjct: 220 VE-ARDKE 226
>gi|418975584|ref|ZP_13523488.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK1074]
gi|383347567|gb|EID25545.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK1074]
Length = 326
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 98/237 (41%), Gaps = 38/237 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V D + +G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 96 VLDACREAGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ ++ +K +P+ G G Q ++ V +++
Sbjct: 152 KDYPDVPSIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAF 190
+ LA+E P+ AS ++N+ + + + + G P+ P + I + F
Sbjct: 210 IRLALEAPQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLISVIASSLEF 268
Query: 191 PFRNMHFYAEPRAAK------------DI------LGWRSTTNLPEDLKERFEEYVK 229
++ + EP + DI LG+R ++ E +++ ++Y K
Sbjct: 269 LYQTLKLKGEPALTRYTYYLLRYSQTLDISKAELDLGYRPQISISEGIEQYVQDYRK 325
>gi|167395152|ref|XP_001741245.1| DTDP-glucose 4,6-dehydratase [Entamoeba dispar SAW760]
gi|165894235|gb|EDR22295.1| DTDP-glucose 4,6-dehydratase, putative [Entamoeba dispar SAW760]
Length = 342
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 101/227 (44%), Gaps = 21/227 (9%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE---K 70
T+NN + + AK++ +K+F+ +S+ +Y E ++ P + + +
Sbjct: 103 THNNIYGTHVLLEIAKANHIKRFIHVSTDEVYGQVIGNAATENSLLNPTNPYSATKAGAE 162
Query: 71 YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV--------RKRPVPIPGSGMQFTNI 122
+I+ F + SF +I GNN F ++++ R + P+ G G + +
Sbjct: 163 FIARAF--YQSFGLPLIITRGNNVFGPHQFPEKLIPKFITLLDRGQNCPLHGCGEEKRSF 220
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
+V+D+ + L + + I+N+ + R ++ + +A +P E + +
Sbjct: 221 IYVQDVVNAFDLILR--KGIIGQIYNIGTTREISNNEVAHTLLDIFQVPKE-----EQDS 273
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
I K F + Y+ + + LGWR+TT+ E LK+ E Y++
Sbjct: 274 RIYHVKNRCFNDQR-YSLDVSKLEKLGWRATTSFEEGLKKTVEWYLE 319
>gi|300710052|ref|YP_003735866.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|448297180|ref|ZP_21487226.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|299123735|gb|ADJ14074.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
gi|445579489|gb|ELY33882.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3]
Length = 296
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
+G+ F D+ P+ + G G Q + HV D+ + LA+E + +N+
Sbjct: 174 AGDYSGVISTFLDQARANDPITVHGDGTQTRDFVHVEDVVRVNLLAMETDHVGEA--YNV 231
Query: 150 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILG 209
+ VT+ +A+ + G EIVH + +A I+ H AE A++ LG
Sbjct: 232 GTGDTVTIAELARAVREVVGSDSEIVHTEGRAGDIN----------HSCAEITKARERLG 281
Query: 210 WRSTTNLPEDL 220
+ T L + L
Sbjct: 282 YEPTVPLADGL 292
>gi|406892407|gb|EKD37764.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 341
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 94/247 (38%), Gaps = 29/247 (11%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYIS 73
R + + A V++F+ S+ G++ PP E P G + ++ +
Sbjct: 94 RHLLEAAVRHHVERFVHCSTVGVHGDVKAPPATEESPYAPADIYQRTKLEGELLAREFAA 153
Query: 74 ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
N RP + G G+ + + + ++ + P+ G+G + ++ ++ DL
Sbjct: 154 RNGLALTVIRPTAIYGPGDLRLLKLF---KLAVRNITPVIGTGKIYYHMVYIDDLVEGFI 210
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP----KAAGIDAKKA 189
LA E EAA +F + + + LD + A+ G P +H A + K
Sbjct: 211 LASE-AEAAIGQVFIVGGEEKMVLDDLLSAIARITGRPESKIHIPALPFQLAGSLCEKIC 269
Query: 190 FPF--------RNMHFYAEPRA-----AKDILGWRSTTNLPEDLKERFEEYVKIGRDKKA 236
P R + F+ + R K +LG+ L E L+ Y + G
Sbjct: 270 IPLGLEPPIYRRRVDFFTKSRLFDTGKVKRLLGYAPKFGLQEGLRRTAAWYKQQGMLFYQ 329
Query: 237 MQFEIDD 243
M F + D
Sbjct: 330 MTFMLSD 336
>gi|421484565|ref|ZP_15932133.1| GDP-L-fucose synthase [Achromobacter piechaudii HLE]
gi|400197060|gb|EJO30028.1| GDP-L-fucose synthase [Achromobacter piechaudii HLE]
Length = 320
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 92/236 (38%), Gaps = 36/236 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPDA 63
N +Q V A ++GV++ LF+ S+ IY +P E + G + + A
Sbjct: 85 NLMIQCNVIRAAYAAGVRKLLFLGSSCIYPREAAQPLREDALLTGPLESTNEPYAIAKIA 144
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G E Y E + + P + G +N D ++RK V I
Sbjct: 145 GLKLCEAYQREYGARFICAMPTNLYGPHDNYDLHSSHVLPALIRKFHEGRESGQESVTIW 204
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
G+G +V DL+ +E+P+A I+N+ + + +++ +A L A+ G
Sbjct: 205 GTGTPLREFLYVDDLAQACVTLMEHPDA--EGIYNIGAGKDISIADLAALVARVVGYHGR 262
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
IV+ K G K R LGWR +L + + + +++
Sbjct: 263 IVYDTTKPDGTPRKLMDSSR-----------VQALGWRPDVSLVDGITLAYGHFLR 307
>gi|153806516|ref|ZP_01959184.1| hypothetical protein BACCAC_00780 [Bacteroides caccae ATCC 43185]
gi|149131193|gb|EDM22399.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
caccae ATCC 43185]
Length = 339
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 19/161 (11%)
Query: 33 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
KQ++FISSA Y KP + P E K +A V + Y + F
Sbjct: 88 TKQYIFISSASAYQKPQTDYRITESTPLVNPFWEYSRNKIEAEEVLMTAYRTTGFPV-TI 146
Query: 82 FRPQYMIG------SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
RP + S + RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGAKGNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYETIADALGKPLNALH 246
>gi|448630383|ref|ZP_21673038.1| NAD-dependent epimerase/dehydratase [Haloarcula vallismortis ATCC
29715]
gi|445756306|gb|EMA07681.1| NAD-dependent epimerase/dehydratase [Haloarcula vallismortis ATCC
29715]
Length = 327
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
S RP + G + + ++ DR+V V +P G+ +A+V D++S L L E
Sbjct: 156 SVRPTVVYGPHDYTERFAYWVDRVVEHEQVVVPSDGLSLWQMAYVEDVASALRLVAERGT 215
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP-FRNM- 195
A + +N+ + A TL L A+ VE + + AAG+ A FP +R+
Sbjct: 216 AGEA--YNVGDEHAPTLREWVDLLARVHDTSVEAIGVGERELAAAGL-APDDFPIYRDSP 272
Query: 196 HFYAEPRAAKDILGWRST 213
H + R LGW ST
Sbjct: 273 HLLSTARLRD--LGWSST 288
>gi|423218422|ref|ZP_17204918.1| hypothetical protein HMPREF1061_01691 [Bacteroides caccae
CL03T12C61]
gi|392627925|gb|EIY21960.1| hypothetical protein HMPREF1061_01691 [Bacteroides caccae
CL03T12C61]
Length = 339
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 19/161 (11%)
Query: 33 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
KQ++FISSA Y KP + P E K +A V + Y + F
Sbjct: 88 TKQYIFISSASAYQKPQTDYRITESTPLVNPFWEYSRNKIEAEEVLMTAYRTTGFPV-TI 146
Query: 82 FRPQYMIG------SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
RP + S + RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVSVHGAKGNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N F++ +D ++T + + + A A G P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYETIADALGKPLNALH 246
>gi|448420567|ref|ZP_21581314.1| nucleoside-diphosphate-sugar epimerase [Halosarcina pallida JCM
14848]
gi|445673718|gb|ELZ26278.1| nucleoside-diphosphate-sugar epimerase [Halosarcina pallida JCM
14848]
Length = 316
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 16/178 (8%)
Query: 4 NYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIY------KPAD----EPPH 53
NYA + LF N V + + GV F SS+ +Y P D EP
Sbjct: 83 NYAHPRQLFEENTEMTYN--VLERMEEVGVSNLAFTSSSTVYGEAPRPTPEDYAPLEPIS 140
Query: 54 VEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPI 112
V G D G + + S++F+ W FR ++G + F ++++ + I
Sbjct: 141 VYGASKLADEGLLSTYAH-SKDFTVWL-FRFANIVGPKQRGNVIPDFIEKLLENPDALTI 198
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 170
G G Q + HV D ++ VEN E AS N +NL + ++ +A + A L
Sbjct: 199 LGDGRQEKSYLHVEDCVRAISHVVENAE-ASMNTYNLGTRTTTSVTAIADIVADVMDL 255
>gi|401683872|ref|ZP_10815757.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus sp. BS35b]
gi|400186912|gb|EJO21117.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus sp. BS35b]
Length = 326
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 98/237 (41%), Gaps = 38/237 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V D + +G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 96 VLDACREAGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ ++ +K +P+ G G Q ++ V +++
Sbjct: 152 KDYPDVPSIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAF 190
+ LA+E P+ AS ++N+ + + + + G P+ P + I + F
Sbjct: 210 IRLALEAPQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLISVIASSLEF 268
Query: 191 PFRNMHFYAEPRAAK------------DI------LGWRSTTNLPEDLKERFEEYVK 229
++ + EP + DI LG+R ++ E +++ ++Y K
Sbjct: 269 LYQTLKLKGEPALTRYTYYLLRYSQTLDISKAELDLGYRPQISISEGIEQYVQDYRK 325
>gi|300692902|ref|YP_003753897.1| NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum PSI07]
gi|299079962|emb|CBJ52639.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia solanacearum
PSI07]
gi|344168492|emb|CCA80782.1| putative NADH dehydrogenase (ubiquinone) [blood disease bacterium
R229]
gi|344173236|emb|CCA88380.1| putative NADH dehydrogenase (ubiquinone) [Ralstonia syzygii R24]
Length = 334
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 20 LQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW 79
L R V D + GVK+ L +S+ G PA + K D E+ I+ + +W
Sbjct: 115 LPRRVVDACRRHGVKRLLHMSALG-ADPAGPSMYQRS---KGDG-----ERVITGSDLDW 165
Query: 80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
FRP + G G D F R+ R P VP+ + +F + +V D+++ A++N
Sbjct: 166 TVFRPSVVFGPG---DHFLNLFARMQRLAPFVPLACAEARFQPV-YVDDVAAAFAHALDN 221
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
P A +++ LV R TL + + A+G P IV
Sbjct: 222 P-ATFRHVYPLVGPRVYTLAELVRFAGTASGHPRWIV 257
>gi|197105552|ref|YP_002130929.1| Nucleoside-diphosphate-sugar epimerase [Phenylobacterium zucineum
HLK1]
gi|196478972|gb|ACG78500.1| Nucleoside-diphosphate-sugar epimerase [Phenylobacterium zucineum
HLK1]
Length = 370
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F RI + + G Q + HVRD++ LA++NP A +FN+ S T++
Sbjct: 229 FASRIANGQAPMVFEDGQQRRDFVHVRDVARAFLLALDNPR-ADGEVFNIGSGVDRTVEE 287
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A L A+A G P P+ AG KA H + A+D+LG+ + + E
Sbjct: 288 VALLQAKAMGRP----DLTPEIAG----KARAGDIRHCIPDLAKARDVLGYEAREDFAEG 339
Query: 220 LKERFEEYVKIGRDKKAMQFEIDDKILESLK 250
L E E+V + E +D+++E+ +
Sbjct: 340 LAE-LAEWVA--------RQEAEDRVVEARR 361
>gi|119872996|ref|YP_931003.1| NAD-dependent epimerase/dehydratase [Pyrobaculum islandicum DSM
4184]
gi|119674404|gb|ABL88660.1| NAD-dependent epimerase/dehydratase [Pyrobaculum islandicum DSM
4184]
Length = 322
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F + +R P+ + G G+Q + A+V D+ + L + + + E + ++N+ SD VT+
Sbjct: 203 FLVQALRGEPITVHGDGLQTRSFAYVSDVVNGL-ITIAHCERCAGEVYNVGSDEEVTILE 261
Query: 160 MAKLCAQAAGLPVEIVH 176
+AKL + AG IVH
Sbjct: 262 LAKLVKEVAGSASPIVH 278
>gi|70732834|ref|YP_262601.1| NAD-dependent epimerase/dehydratase [Pseudomonas protegens Pf-5]
gi|68347133|gb|AAY94739.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
protegens Pf-5]
Length = 309
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 18/184 (9%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + GVK+ LF SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIGTLNVCEAMREHGVKRVLFASSAAVYGNNGEGQSIDEDTAKAPLTPYASDKLASE 154
Query: 75 NFSNW---------ASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
++ ++ A FR + G S F +R + P+ + G G Q
Sbjct: 155 HYLDFYRRQHGLEPAIFRFFNIFGPRQDPSSPYSGVISIFSERAQQGLPITVFGDGEQTR 214
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDP 179
+ +V DL +L A+E P+ + N+ ++A TL M A+ G LP + Y P
Sbjct: 215 DFVYVGDLVQVLVQAIEAPQLEVGAV-NVGLNQATTLKQMLAALAEVVGALPP--ISYGP 271
Query: 180 KAAG 183
AG
Sbjct: 272 ARAG 275
>gi|17544806|ref|NP_518208.1| NADH-ubiquinone oxidoreductase [Ralstonia solanacearum GMI1000]
gi|17427095|emb|CAD13615.1| putative nadh-ubiquinone oxidoreductase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 334
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 20 LQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW 79
L R V D + GVK+ L +S+ G PA + K D E+ ++ + +W
Sbjct: 115 LPRRVVDACRRHGVKRLLHMSALGA-DPAGPSMYQRS---KGDG-----ERIVTGSDLDW 165
Query: 80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
FRP + G G D F R+ R P VP+ + +F + +V D+++ A++N
Sbjct: 166 TVFRPSVVFGPG---DHFLNLFARLQRLAPFVPLARAEARFQPV-YVDDVAAAFAHALDN 221
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
P A +++ LV R TL + + A+G P IV
Sbjct: 222 P-ATFGHVYPLVGPRVYTLAELVRFAGTASGHPRWIV 257
>gi|423458753|ref|ZP_17435550.1| hypothetical protein IEI_01893 [Bacillus cereus BAG5X2-1]
gi|401145916|gb|EJQ53437.1| hypothetical protein IEI_01893 [Bacillus cereus BAG5X2-1]
Length = 328
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ GVK+ + +S+ IY DE +V + PD H K++
Sbjct: 86 NANVLGTKHIIEGSQKYGVKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDQAFTHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D V L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDERVNL 236
>gi|427419645|ref|ZP_18909828.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
gi|425762358|gb|EKV03211.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
Length = 347
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFRPQ 85
++F+ +S+ G++ DEPP E +KP G + + + ++ RP
Sbjct: 118 RRFVHVSTIGVHGHVDEPPGDENCPLKPGDIYQETKLEGEIWIRDFGQQSGLPVTVVRPA 177
Query: 86 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 145
+ G G + + + ++V + VP G+G + HV DL++ A +P+A
Sbjct: 178 GIYGPGEKRLLKIY---KMVMQGWVPAIGNGGNLLHFVHVDDLTNFFIHAATHPQAMGE- 233
Query: 146 IFNLVSDRAVTLDGMAKLCA 165
+F S +A+T M L
Sbjct: 234 VFICGSQQAITFRDMVGLIG 253
>gi|407461584|ref|YP_006772901.1| NAD-dependent epimerase/dehydratase [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045206|gb|AFS79959.1| NAD-dependent epimerase/dehydratase [Candidatus Nitrosopumilus
koreensis AR1]
Length = 289
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 76
N +L + + D +K + VK+F++ S G+ K D P G + ++ EK I +
Sbjct: 87 NVQLTQKIVDLSKKAKVKKFVYTSGLGVSK--DTPL---GYFI----SKLKAEKSIINSK 137
Query: 77 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG 116
N+ FRP Y++G D + ++K V IPGSG
Sbjct: 138 INYTIFRPSYIVGKD---DLFTKHLKKSIKKNKVIIPGSG 174
>gi|407723698|ref|YP_006843359.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti Rm41]
gi|407323758|emb|CCM72359.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti Rm41]
Length = 324
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
+ +RI P I G G Q + HVRD++ LA ++ + +FN+ S +L
Sbjct: 196 WMERIAAGCPPIILGDGTQTLDFVHVRDIARANLLAAKS--GVTDEVFNVASGTETSLKD 253
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A+L A+ G +E Y+P A+K A+ R A+ +LG+++ +L E
Sbjct: 254 LAQLLARIMGSSIE-PQYEP------ARKVNAVTRR--LADMRKAERLLGFKTEISLEEG 304
Query: 220 LKE 222
L+E
Sbjct: 305 LRE 307
>gi|334321038|ref|YP_004557667.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83]
gi|334098777|gb|AEG56787.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83]
Length = 324
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
+ +RI P I G G Q + HVRD++ LA ++ + +FN+ S +L
Sbjct: 196 WMERIAAGCPPIILGDGTQTLDFVHVRDIARANLLAAKS--GVTDEVFNVASGTETSLKD 253
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A+L A+ G +E Y+P A+K A+ R A+ +LG+++ +L E
Sbjct: 254 LAQLLARIMGSSIE-PQYEP------ARKVNAV--TRRLADMRKAERLLGFKTEISLEEG 304
Query: 220 LKE 222
L+E
Sbjct: 305 LRE 307
>gi|117927659|ref|YP_872210.1| NAD-dependent epimerase/dehydratase [Acidothermus cellulolyticus
11B]
gi|117648122|gb|ABK52224.1| NAD-dependent epimerase/dehydratase [Acidothermus cellulolyticus
11B]
Length = 333
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 36/236 (15%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKP 61
++N R+Q V D A ++GV++ LF+ S+ IY K A +P P E +
Sbjct: 96 SDNLRIQVNVLDAALATGVERLLFLGSSCIYPKHAPQPIPEEALLTGPLEPTNEAYAIAK 155
Query: 62 DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-WFFDRIVRK---------RPVP 111
AG +QV+ E W S P + G G+N D ++R+ V
Sbjct: 156 IAGVLQVQAARREYGVRWISAMPTNLYGPGDNFDLRTAHVLPALIRRFHEAVQSGAEEVV 215
Query: 112 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
+ G+G HV DL+ L ++ + N+ +++ +A+L A+ G
Sbjct: 216 LWGTGTPRREFLHVDDLARACELLLDCYD--DPLPINVGVGEDISIAELAELIAEIVGYS 273
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
+I +DP +K R + LG+R L E ++ + Y
Sbjct: 274 GKI-RFDPSKPDGTPRKLLDVRRI----------TALGFRPRIGLAEGIRATYAWY 318
>gi|406672432|ref|ZP_11079657.1| hypothetical protein HMPREF9700_00199 [Bergeyella zoohelcum CCUG
30536]
gi|405586976|gb|EKB60704.1| hypothetical protein HMPREF9700_00199 [Bergeyella zoohelcum CCUG
30536]
Length = 331
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-------WA 80
A+ +GVK+ ++ +S+ Y + P VE + KP + + + KY++E +++ +
Sbjct: 115 ARDTGVKRLVYAASSSTYGDSKSLPKVEDVIGKPLSPYA-ITKYVNELYADVFKRTYDFD 173
Query: 81 SFRPQYMIGSGNNKDCEEW-------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
+ +Y G +D + F +++ + I G G + ++ ++ M
Sbjct: 174 TIGLRYFNVFGRRQDPKGAYAAVIPKFVIQLMNHKSPTINGDGTYSRDFTYIDNVIQMNL 233
Query: 134 LAV--ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 191
LA+ ENP+A + V DR T+ M +L L + YDPK A ++ P
Sbjct: 234 LAITSENPDALNQVYNTAVGDRT-TIKDMTEL------LKKYLSEYDPKIAEVEILHG-P 285
Query: 192 FRNM---HFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
R H A A+ LG++ T E LKE + Y
Sbjct: 286 NRQGDVPHSLASIEKAQKNLGYQPTHKFAEGLKEAVDWY 324
>gi|160940253|ref|ZP_02087598.1| hypothetical protein CLOBOL_05142 [Clostridium bolteae ATCC
BAA-613]
gi|158436833|gb|EDP14600.1| hypothetical protein CLOBOL_05142 [Clostridium bolteae ATCC
BAA-613]
Length = 337
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 23/163 (14%)
Query: 33 VKQFLFISSAGIY-KPADEPPHVEGDVV----------KPDAGHVQVEKYISENF----- 76
+Q++FISSA Y KPA P E + K DA V Y F
Sbjct: 88 TRQYIFISSASAYQKPAAGCPITESTPLINPYWEYSRKKIDAEEVLTAAYRKNGFPVTIV 147
Query: 77 ---SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
+ +P I G+ + + RI+ +PV IPG G + H D +
Sbjct: 148 RPSHTYDGKKPPVAI-HGHKGNWQ--ILKRILEGKPVIIPGDGTSLWTLTHSADFARGYV 204
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N +++ SD ++T + + + A+A P+ +H
Sbjct: 205 GLMGNPHAI-GNAYHITSDESMTWNQIYETLAEALDRPLNALH 246
>gi|150376036|ref|YP_001312632.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419]
gi|150030583|gb|ABR62699.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419]
Length = 368
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 16/117 (13%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV--- 172
G Q + HVRD++ LA+E P AA ++ N+ S A + +A L A A G+P
Sbjct: 243 GRQKRDFVHVRDVARAFRLALEQPHAA-GHVINIGSGHAYAIADIASLLADAMGVPEIGP 301
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
EI+H KA D + F A+ A+D+LG+ L + L + F ++V+
Sbjct: 302 EIMH---KARSGDIRNCF--------ADISKARDLLGFEPAHRLEDSLAD-FAQWVR 346
>gi|302038296|ref|YP_003798618.1| putative uDP-glucose 4-epimerase [Candidatus Nitrospira defluvii]
gi|300606360|emb|CBK42693.1| putative UDP-glucose 4-epimerase [Candidatus Nitrospira defluvii]
Length = 332
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 18/215 (8%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-NWASF 82
V D A +K+ +F SS+ +Y E P E + + + V K E +A
Sbjct: 102 VLDCAIQHRIKRLVFASSSEVYGEPIENPITEETITQGKTVYA-VSKLAGEELCIGYAQR 160
Query: 83 RPQY------MIGSGNNKDCEEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDLSSML 132
P++ + ++ + ++ +P+ I GSG Q + + D + +
Sbjct: 161 YPEFEHVILRFFNAYGPYQAAQFVLPKFIQNAMTGKPIVINGSGDQIRSYCYSEDTARGV 220
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDPKAAGIDAKKAFP 191
A+ PEA I SDR +L +A L +A+G PVEI + AA
Sbjct: 221 VEALLRPEAVGQVINLGNSDRPTSLKELADLVVKASGNSPVEIKY----AADFQGTDRHA 276
Query: 192 FRNMH-FYAEPRAAKDILGWRSTTNLPEDLKERFE 225
R +H Y AK +LG+ S L + ++ E
Sbjct: 277 SREIHRRYCSGEKAKRLLGFESRVTLEDGIRRIIE 311
>gi|269796015|ref|YP_003315470.1| nucleoside-diphosphate-sugar epimerase [Sanguibacter keddieii DSM
10542]
gi|269098200|gb|ACZ22636.1| nucleoside-diphosphate-sugar epimerase [Sanguibacter keddieii DSM
10542]
Length = 329
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 35 QFLFISSAGIYK-PADEPPHVEGDVVK-PDAGHVQVEKYISENFSNWASFR----PQYMI 88
Q++FISSA Y+ P P +E ++ P G+ Q +K E+ A++R P ++
Sbjct: 96 QYVFISSASAYQTPPSRLPVLESTPLRNPFWGYSQ-DKIACEDLLV-AAYRDAGFPATVV 153
Query: 89 GSGNNKDCEE------W-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
+ D W +R+ + V + G G I H D + + NP
Sbjct: 154 RPSHTYDQTSVPLDGGWTVVERMRAGKEVVVHGDGTSLWTITHTEDFALGFVPLLANPRT 213
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-AGIDA 186
+ F++ SD A+T D + + A+AAG+ +IVH A A +DA
Sbjct: 214 VG-DTFHITSDEALTWDHITQTLARAAGVEAKIVHVPSDAIAAVDA 258
>gi|444429672|ref|ZP_21224854.1| putative nucleotide-sugar epimerase [Gordonia soli NBRC 108243]
gi|443889333|dbj|GAC66575.1| putative nucleotide-sugar epimerase [Gordonia soli NBRC 108243]
Length = 352
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G Q + HV D++ A+E+ S FN+ S R + + +A + A+AAG P IV
Sbjct: 241 GRQMRDFVHVDDVARANLAAIEDRSLESFRAFNICSGRPIAIGEVATILAEAAGGPPPIV 300
Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
+ + + + H A+P AA+ LG+R++T +PE RF
Sbjct: 301 TGEHRVSDV----------RHVVADPAAAEAELGFRAST-MPEVGIARF 338
>gi|440795762|gb|ELR16878.1| NAD dependent epimerase/dehydratase [Acanthamoeba castellanii str.
Neff]
Length = 385
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 21/225 (9%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----KPDAGHVQVEK 70
++N + + D A+ V F+F SS+ +Y + P E D V P A + +
Sbjct: 167 HSNLQGTLVMLDMARDYTVTNFVFASSSSVYGENKKVPFAETDRVDNPVSPYAATKRACE 226
Query: 71 YISENFSNW-----ASFRPQYMIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAH 124
+++ +++ + R + G D + F D I +P+ G G +
Sbjct: 227 LLAKTYNHLYGIPMSGLRFFTVYGPRGRPDMAPYKFIDAIYNGKPINKFGDGTTSRDYTF 286
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
V D+ + ++ P A +FNL + R + L+ ++ A G I H P+ +
Sbjct: 287 VSDVVQGIVATIDMP-FAELQLFNLGNSRTINLNRFIEVVEAAVGKKAVINHMPPQPGDV 345
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+A+ R +K +LG+ + E +K E Y++
Sbjct: 346 PIT----------FADLRKSKQLLGYDPQVPIEEGIKRMAEWYIE 380
>gi|332708433|ref|ZP_08428410.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
gi|332352836|gb|EGJ32399.1| nucleoside-diphosphate-sugar epimerase [Moorea producens 3L]
Length = 327
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---------AGHVQVEKYISENFSN 78
A +GV+ F+FISS G + E +PD A +E S N
Sbjct: 104 AIKAGVQHFIFISSIGAMATLSDQILTENSPCQPDTPYGCSKLKAEQALIELASSSNKMT 163
Query: 79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVE 137
W RP + G GN + E ++V+K+ +P+P GS ++ V +L + +
Sbjct: 164 WTILRPTLVYGQGNPGNMERLI--KLVQKK-LPLPFGSLNNRRSLVFVGNLVDAIATIIT 220
Query: 138 NPEAASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPVEIV 175
+P+A + L+SD ++ + + AQ LP I+
Sbjct: 221 HPQAKNQTF--LISDGEDLSTTQLIRQIAQCLELPCHIL 257
>gi|308070546|ref|YP_003872151.1| UDP-glucose 4-epimerase [Paenibacillus polymyxa E681]
gi|305859825|gb|ADM71613.1| Putative UDP-glucose 4-epimerase [Paenibacillus polymyxa E681]
Length = 311
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 29/221 (13%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFS----NWASF 82
+GV +F+F S++G+Y + E D V+P +G+ + E YI + N+
Sbjct: 106 AGVSKFIFASTSGVYGELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFYRLYGLNYTIL 165
Query: 83 RPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
R + G G E F +R+ + P+ I G G Q + +V+D+ A+
Sbjct: 166 RYGNVYGPGQAAKGEGGVVALFMERLKKGSPLLIHGDGTQTRDFVYVKDVVRANMAAI-- 223
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 198
AA ++ + R +++ +A + G V V Y P AG ++H
Sbjct: 224 -HAADQRTVHVSTGRTTSINRLAYDLLKLHGSSVRPV-YSPARAG----------DIHHS 271
Query: 199 AEPRA-AKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQ 238
A A+ L W + L+E + +G DK+ Q
Sbjct: 272 CLSNAVARHWLRWEPLYGISAGLRETYVS--SMGTDKEGSQ 310
>gi|46389927|dbj|BAD15711.1| unknown protein [Oryza sativa Japonica Group]
Length = 72
Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 7/41 (17%)
Query: 87 MIGSGNNKDCEEWFFDRIVRKRP------VPIPGSGMQFTN 121
MIGSGNNKDCEEWFFD + + P +P P + + F+N
Sbjct: 1 MIGSGNNKDCEEWFFDSKITQIPPTKFSQIPYPHTKI-FSN 40
>gi|294875223|ref|XP_002767230.1| nad dependent epimerase/dehydratase, putative [Perkinsus marinus
ATCC 50983]
gi|239868776|gb|EEQ99947.1| nad dependent epimerase/dehydratase, putative [Perkinsus marinus
ATCC 50983]
Length = 194
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 106 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 165
R + I G G+QF + HV+D+ + LA +N + S NL S A T+ +A L +
Sbjct: 26 RGEELTIEGDGLQFRDFVHVKDIGRGIILAYQNDQVRSGQPINLGSGEAHTVQELADLIS 85
Query: 166 QAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF---YAEPRAAKDILGWRSTTNLPEDLKE 222
++ P R A+ AK++LGW + N ++++
Sbjct: 86 -------------------SNQRHVPARKNDLRGTLADTCKAKELLGWSTRKNFRDEMRR 126
Query: 223 RFEEYVKIGRDKKAMQFEIDDKILESLKVPIP 254
E+ + GR + + LE L+ IP
Sbjct: 127 IIEDTLA-GRGLYLSHWFQQAETLEWLEDRIP 157
>gi|431928657|ref|YP_007241691.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas stutzeri RCH2]
gi|431826944|gb|AGA88061.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas stutzeri RCH2]
Length = 307
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 83
+ + + +GVK+ LF SSA +Y E ++ D K +K SE++ ++ +R
Sbjct: 101 LCEAMREAGVKRVLFASSAAVYGNNGEGQAIDEDTPKAPLTPYAADKLASEHYLDF--YR 158
Query: 84 PQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 127
Q+ + G +D F +R + P+ + G G Q + +V D
Sbjct: 159 RQHGLEPVVFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIAVFGDGEQTRDFVYVGD 218
Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 187
L +L A+E+PEAA + N+ ++A +L+ + + G E+ + ++ I
Sbjct: 219 LVEVLVQALESPEAAEGAV-NVGLNQATSLNQLLEAIGDVLGGLPEVSYQASRSGDIRHS 277
Query: 188 KAFPFRNMHFYAEP 201
+A R + Y P
Sbjct: 278 RANNARLVQRYRLP 291
>gi|254415758|ref|ZP_05029516.1| NAD dependent epimerase/dehydratase family [Coleofasciculus
chthonoplastes PCC 7420]
gi|196177464|gb|EDX72470.1| NAD dependent epimerase/dehydratase family [Coleofasciculus
chthonoplastes PCC 7420]
Length = 325
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI 72
NF + + +GVK F+FISS G + P E +PD + +Q E+ +
Sbjct: 95 NFEGTANLVKQSIQAGVKHFMFISSIGAMATLSDHPLTETSPCQPDTPYGRSKLQAEQAL 154
Query: 73 ----SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL 128
S++ W RP + GSGN + E I R P+P G ++ +V +L
Sbjct: 155 IELASQSSMTWTILRPTLVYGSGNPGNMER-LIKLINRGLPLPF-GLVNNRRSLLYVGNL 212
Query: 129 SSMLTLAVENPEAASSNIFNLVSD 152
+ + +P A + LVSD
Sbjct: 213 VDAIATCLTHPNAKNQTF--LVSD 234
>gi|323703554|ref|ZP_08115199.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans
DSM 574]
gi|323531457|gb|EGB21351.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans
DSM 574]
Length = 309
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 22/147 (14%)
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
RP + G G N DC F +++R R + G G Q+ + +V D+ L A
Sbjct: 164 LRPTLVYGPGQNDDC---FMSQLIRSLLSGRHFSMTG-GEQYRDFVYVSDVVEALWQAAN 219
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF---RN 194
NP A IFN+ S ++ L +A++ A G P +++ A P+
Sbjct: 220 NPRALG-GIFNIGSGKSYPLREVARMIADFIGQPDDLLKIG----------ALPYNKEEQ 268
Query: 195 MHFYAEPRAAKDILGWRSTTNLPEDLK 221
+ + +AK +L W+ L E +K
Sbjct: 269 FAYCVDINSAKQVLNWQPKIMLREGIK 295
>gi|443289722|ref|ZP_21028816.1| NAD-dependent epimerase/dehydratase [Micromonospora lupini str.
Lupac 08]
gi|385887337|emb|CCH16890.1| NAD-dependent epimerase/dehydratase [Micromonospora lupini str.
Lupac 08]
Length = 336
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 18/175 (10%)
Query: 33 VKQFLFISSAGIYKPADEP------PHVEGDVVKPDAGHVQV----EKYISENFSNWASF 82
V F+++SS +Y P P +GD D + Q+ E+ + E F N A
Sbjct: 88 VGHFVYVSSGSVYADPVAPGSDETAPVADGDPDAVDGDYQQLKAGAERAVREVFENRALI 147
Query: 83 -RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
R ++G G + W+ +RI R V PG VRDL+S + ++ E
Sbjct: 148 ARAGLILGPGEDIGRLPWWLNRIARGGDVLAPGPAELPIQCIDVRDLASWM---LDQGER 204
Query: 142 ASSNIFNLVSDRA-VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPF 192
FN VS T+ + C G + DP+ AAG++ P
Sbjct: 205 GQGGTFNAVSRPGHSTMGELLDECVAVTGSDARLRWIDPESILAAGVEPWNELPI 259
>gi|295835463|ref|ZP_06822396.1| GDP-L-fucose synthetase [Streptomyces sp. SPB74]
gi|295825502|gb|EDY43378.2| GDP-L-fucose synthetase [Streptomyces sp. SPB74]
Length = 317
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 23/149 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKP------------DA 63
N ++Q V A ++GV++ LF+ S+ IY K A +P H + + P A
Sbjct: 93 NLQIQLSVIAGAHAAGVERLLFLGSSCIYPKHAPQPIHEDALLTGPLEPTNQAYALAKIA 152
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVR---------KRPVPIP 113
G QV Y S+ + + S P + G G+N D E +VR + V +
Sbjct: 153 GITQVRSYRSQYGAAYISAMPTNLYGPGDNFDLETSHVLPALVRRFHEAKAEGREEVVLW 212
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
GSG HV DL++ L + + + A
Sbjct: 213 GSGSPRREFLHVDDLAAACVLLLRSYDGA 241
>gi|218904363|ref|YP_002452197.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus AH820]
gi|218538882|gb|ACK91280.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus AH820]
Length = 328
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYISENFSNW 79
+ + + ++ G+K+ + +S+ IY DE +V + PD H KY++E +
Sbjct: 93 KHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAEQAIDQ 152
Query: 80 A--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
A + RP+ + G G+N ++ K +P G+ +I +V ++
Sbjct: 153 AFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITYVENVVDA 210
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTL 157
L L + +P+ +N+ +D + L
Sbjct: 211 LLLCMHSPKHTLGQKYNITNDERINL 236
>gi|403252244|ref|ZP_10918554.1| UDP-glucose 4-epimerase [Thermotoga sp. EMP]
gi|402812257|gb|EJX26736.1| UDP-glucose 4-epimerase [Thermotoga sp. EMP]
Length = 309
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 27/212 (12%)
Query: 32 GVKQFLFISSAG-IY--------KPADEPPH-VEGDVVKPDAGHVQVEKYISENFSNWAS 81
GVK+F+F S+ G IY P E PH + + + + +E + E +
Sbjct: 108 GVKKFIFSSTGGAIYGENVKVFPTPETEIPHPISPYGIAKYSTEMYLEFFAREYGLKYTV 167
Query: 82 FRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
R + G + E F +R++R V I G G + +V D+ LA+E
Sbjct: 168 LRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAME 227
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 197
+ +FN+ + R T++ + K+ + G E V+ P+ D +K+
Sbjct: 228 K---GDNEVFNIGTGRGTTVNQLFKMLKEITGYDKEPVYKPPRKG--DVRKSI------- 275
Query: 198 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+ AK+ LGW +L E LK E + K
Sbjct: 276 -LDYTKAKEKLGWEPKVSLEEGLKLTVEYFRK 306
>gi|406947709|gb|EKD78591.1| nad-dependent epimerase/dehydratase [uncultured bacterium]
Length = 316
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 23/218 (10%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV----VKPDA-GHVQVEKY 71
NF + + D A + GV QF+F S++ +Y P E + + P A ++ E+Y
Sbjct: 101 NFGGTKKLVDRASTHGVTQFIFGSTSAVYGNTATLPFSEDLINLNPISPYAISKLKAERY 160
Query: 72 ISENFSNWAS----FRPQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQFTNIAHVR 126
+ E+ FR + G D + F + I+ ++P+ G G + ++
Sbjct: 161 LHEHHVRTGLPVTIFRFFTVYGERGRPDMAPYLFTEAILHQQPIKKFGDGSTSRDYTYID 220
Query: 127 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA 186
D+ S + A+E + I NL + +AV+L+ G K A I+
Sbjct: 221 DIISGIMTAIE--RSFDFEIINLGNHQAVSLNEFISTLEHVTG----------KTAVIEQ 268
Query: 187 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
A H A+ A+ +L + T+L E L +RF
Sbjct: 269 LPAQSGDVNHTLADILKARRLLNYEPKTSLQEGL-QRF 305
>gi|399028147|ref|ZP_10729450.1| nucleoside-diphosphate-sugar epimerase [Flavobacterium sp. CF136]
gi|398074224|gb|EJL65375.1| nucleoside-diphosphate-sugar epimerase [Flavobacterium sp. CF136]
Length = 316
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 36/236 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP---PHVEGDVVKPD--------AG 64
N ++Q + D A + V++F+F+ S+ IY K A +P ++ D ++P
Sbjct: 84 NMQIQNNLIDSALQNNVEKFIFLGSSCIYPKLAPQPLKEDYLLTDTLEPTNEWYAIAKIT 143
Query: 65 HVQVEKYISENFS-NWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
V+ + I F ++ S P + G+ +N D ++RK PV +
Sbjct: 144 GVKTCQAIRNQFGKDYVSLMPTNLYGTHDNFDLNTSHVLPAMIRKFHEAKENSHAPVTLW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
GSG V D++ + A+EN ++N+ + +T+ +A+ Q G E
Sbjct: 204 GSGTPMREFLFVDDMAQAVVFALEN--KLPDYLYNVGTGEDLTIKHLAETIQQITGHKGE 261
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
I+ K G +K MH LGW+ L E +++ + +++
Sbjct: 262 IIWDSTKPDGT-PRKLMDVSKMHN----------LGWKHKIELQEGIQKTYNWFLE 306
>gi|414157729|ref|ZP_11414025.1| hypothetical protein HMPREF9188_00299 [Streptococcus sp. F0441]
gi|410871647|gb|EKS19594.1| hypothetical protein HMPREF9188_00299 [Streptococcus sp. F0441]
Length = 326
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V D + +G+++ +++SS IY P D+ E + + + ++ YI ++ F
Sbjct: 96 VLDACREAGIQRLVYVSSPSIYAAPRDQLAIKESEAPQEN----KLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ ++ +K +P+ G G Q ++ V +++
Sbjct: 152 KDYPDVPSIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAKKAF 190
+ LA+E P+ AS ++N+ + + + + G P+ + I + F
Sbjct: 210 IRLALEAPQ-ASGEVYNITNGEPREFRSLIEETLRGLGYPITYRKVPASLLSAIASTLEF 268
Query: 191 PFRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 229
++ +H EP +A +D LG+R ++ E + + ++Y K
Sbjct: 269 IYKILHLKGEPVLTRYTYYLLRYSQTLDISKAERD-LGYRPRISISEGIDQYVQDYRK 325
>gi|312898930|ref|ZP_07758318.1| NAD-binding domain 4 [Megasphaera micronuciformis F0359]
gi|310620092|gb|EFQ03664.1| NAD-binding domain 4 [Megasphaera micronuciformis F0359]
Length = 310
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN--WAS 81
V + A+ +GVK+ +F SSA +Y D P E + + P + + + K ISE + +
Sbjct: 100 VLEGARKTGVKKVVFSSSAAVYGDNDNLPLKEDEPLTPTSFY-GLSKVISERYLEMYYKV 158
Query: 82 FRPQYMIGSGNNKDCEEW-----------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
F Y++ N E F + + I G G Q + +V+D+++
Sbjct: 159 FGLPYVVLRYANVYGERQGVHGEGGVVFVFAHALTHGEDLTIYGDGEQTRDFVYVKDVAA 218
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
A+++ I+N+ + T++ + ++ +G+ + VHY+ + G + A
Sbjct: 219 ANVAALQDE--VKPGIYNISTTIETTVNALKEILFHLSGIRKD-VHYEDERTGDIVRSAL 275
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+ AK+ L WR + L +E +V+
Sbjct: 276 ---------DNHKAKEFLKWRPKEKIISGLASTYEYFVQ 305
>gi|50954416|ref|YP_061704.1| hypothetical protein Lxx06550 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50950898|gb|AAT88599.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 302
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 12/155 (7%)
Query: 33 VKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS---------F 82
V Q++FISSA Y+ P P E ++ +K E+
Sbjct: 65 VGQYMFISSASSYQTPPSRLPVTESTPLRNPFWQYSRDKIACEDLLVQGYRERGFPITIV 124
Query: 83 RPQYMIGSGNNKDCEEWF-FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
RP + W +R+ R PV + G G I H D + T + PEA
Sbjct: 125 RPSHTYDRTMIPTSGHWTDLERMRRGAPVVVHGDGTGRWTITHSTDFAVAFTGLLGRPEA 184
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ F++ SD A T D + A+A G+ E+VH
Sbjct: 185 V-GDTFHITSDEAPTWDQIYCYLAEALGVEAELVH 218
>gi|78188649|ref|YP_378987.1| UDP-glucose 4-epimerase [Chlorobium chlorochromatii CaD3]
gi|78170848|gb|ABB27944.1| UDP-glucose 4-epimerase [Chlorobium chlorochromatii CaD3]
Length = 327
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 94 KDCEEWFFDRIVR----KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
KD + F VR +P+ + G GMQ + +V D L LA N ++A+ ++NL
Sbjct: 189 KDARQTFLGIWVRLLIEGKPIKVFGDGMQLRDFNYVDDCVDALLLAGVN-DSANGKVYNL 247
Query: 150 VSDRAVTLDGMAKLCAQ-AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
S V L +A++ G E+V + P+ ID +Y++ L
Sbjct: 248 GSTEVVGLKTLAEMMVNFYDGATYELVPFPPERKAIDIGD--------YYSDFSLITKEL 299
Query: 209 GWRSTTNLPEDLKERFEEY 227
GW L + LK+ Y
Sbjct: 300 GWEPKVGLQDGLKKTVAYY 318
>gi|423675041|ref|ZP_17649980.1| hypothetical protein IKS_02584 [Bacillus cereus VDM062]
gi|401308976|gb|EJS14350.1| hypothetical protein IKS_02584 [Bacillus cereus VDM062]
Length = 328
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + + G+K+ + +S+ IY DE +V + PD H K++
Sbjct: 86 NANVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDQAFMHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D V L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDERVNL 236
>gi|423668832|ref|ZP_17643861.1| hypothetical protein IKO_02529 [Bacillus cereus VDM034]
gi|401300280|gb|EJS05873.1| hypothetical protein IKO_02529 [Bacillus cereus VDM034]
Length = 328
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + + G+K+ + +S+ IY DE +V + PD H K++
Sbjct: 86 NANVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDQAFMHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D V L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDERVNL 236
>gi|196038034|ref|ZP_03105344.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus NVH0597-99]
gi|196031304|gb|EDX69901.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Bacillus cereus NVH0597-99]
Length = 328
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 86 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G +I +
Sbjct: 146 AEQAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGIENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D + L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDERINL 236
>gi|333980707|ref|YP_004518652.1| UDP-glucose 4-epimerase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333824188|gb|AEG16851.1| UDP-glucose 4-epimerase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 313
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 27/215 (12%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS---------N 78
+ +GV++ ++ SSA +Y P E V+P AG+ + K+ E++ +
Sbjct: 104 CRRTGVEKVIYASSAAVYGDPLYLPVDEEHPVRPLAGY-GISKHTVEHYLEVYRGLYGLD 162
Query: 79 WASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ R + G + E F R+++ I G G Q + +V D+++
Sbjct: 163 YTVLRYANVYGPRQDATGEGGVVAVFVHRLLQGEAPCIFGDGEQTRDFVYVGDVAAANLA 222
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 194
AV+ S + N+ + RA +++ + +L + G ++ + P+ I
Sbjct: 223 AVKK---GSGRVLNVSTGRATSVNDLFQLLQKITGSKIKARYCPPRPGDI---------- 269
Query: 195 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
H Y A+ LGW++ T+L L E Y K
Sbjct: 270 RHSYLSCDLARKTLGWQALTDLAAGLNLTVEWYRK 304
>gi|332715613|ref|YP_004443079.1| NAD-dependent epimerase/dehydratase [Agrobacterium sp. H13-3]
gi|325062298|gb|ADY65988.1| NAD-dependent epimerase/dehydratase [Agrobacterium sp. H13-3]
Length = 307
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 30 SSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFSNWASFRP 84
+ GVK+ L++SS G +Y E P EG ++ P + V +E Y+ + + A +P
Sbjct: 103 ACGVKRILYLSSGGTVYGKPQEIPIPEGHILDPICSYGVVKVAIESYL-KLYEMKAGLQP 161
Query: 85 QYMIGS-------GN--NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
+ S GN + + + ++ +P+ I G G + HV+DL+S+ A
Sbjct: 162 IVIRASNPYGPYQGNLGVQGIIGTYLNLALKHQPIEIWGDGSTIRDYIHVKDLASLCVAA 221
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+++ + I+N S ++ +A++ + G P+ I++
Sbjct: 222 LQSDKIG---IYNGGSGTGTSVLHIAEVVQEITGNPIPIIY 259
>gi|158318391|ref|YP_001510899.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec]
gi|158113796|gb|ABW15993.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec]
Length = 359
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F V RP+ + G G+QF N +VRDL+ LA+ + +A++ L + V++
Sbjct: 220 FVHNAVHGRPLTVAGDGLQFRNYVYVRDLADAHVLALAD--SAANTTLALEGNEPVSVLE 277
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
MA+ + P + + P G FR A+ RAA +LGWR TT +
Sbjct: 278 MAQAVQRH--FPGTEIEHMPARPG-------DFRGREISAQ-RAAG-LLGWRPTTPFLDG 326
Query: 220 LKERFEEY 227
+++ E Y
Sbjct: 327 VRQYIEWY 334
>gi|350568632|ref|ZP_08937030.1| UDP-glucose 4-epimerase [Propionibacterium avidum ATCC 25577]
gi|348660875|gb|EGY77571.1| UDP-glucose 4-epimerase [Propionibacterium avidum ATCC 25577]
Length = 367
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 86/228 (37%), Gaps = 42/228 (18%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP------------- 61
+NN + + +GV + LF SSA IY +E E + P
Sbjct: 128 DNNVGKTVALLKGMERNGVHRILFSSSASIYATDEEFKVTEQSALDPGSPYATTKFMVEF 187
Query: 62 ---DAGHVQVEKYISENFSNWASFRPQYMIGSGN-------NKDCEEWFFDRIVRKRPVP 111
DA H K +S + N P+ G K + W D V
Sbjct: 188 ILRDAAHASDLKALSLRYFNPIGSDPKLRTGQQIEHPTHVLGKMIDAWMEDSTFTVTGVE 247
Query: 112 IP---GSGMQFTNIAHVRDLSSMLTLAVENPEAASS----NIFNLVSDRAVTLDGMAKLC 164
P GSG++ + HV DL+ A+E+ + ++ +FN+ + VT+ + K
Sbjct: 248 WPTRDGSGIR--DFIHVWDLARAHVAALEHLDEVTTEDPYQVFNIGTGNGVTVKELVKAF 305
Query: 165 AQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 212
+ G P+++V+ P+ + Y AKD+LGW +
Sbjct: 306 EEGTGKPLDVVYGPPRPGDVAGA----------YTVSSRAKDLLGWSA 343
>gi|319795313|ref|YP_004156953.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS]
gi|315597776|gb|ADU38842.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS]
Length = 319
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 99/249 (39%), Gaps = 31/249 (12%)
Query: 1 MEFNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADE--PPHVEGDV 58
+E N R N + L +A+ A ++GVK+ +F+SS G+ + P E D
Sbjct: 76 IERNSDPLAEFRRINRDGTLN--LAEQAATTGVKRLIFLSSIGVMGSTTDGRAPFSESDT 133
Query: 59 VKPDAGH----VQVEKYISENFSNWAS----FRPQYMIGSGNNKDCEEWFFDRIVRKR-- 108
+P + ++ E+ + E + RP + G G + F R+VR
Sbjct: 134 PQPMMDYAISKLEAERGLQEIATRTGLEVVILRPPMVYGPGAPGN-----FARLVRALVK 188
Query: 109 --PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA- 165
P+P+ + +++L ++ +E+P AAS + T+D + ++
Sbjct: 189 GWPLPLGSVSSNRRSYIGIQNLVDLIVTCIEHPAAASQTFLACDGEDVSTVDLLRRMGVA 248
Query: 166 -----QAAGLPVEIVHYDPKAAGIDAKKAFPFR-NMHFYAEPRAAKDILGWRSTTNLPED 219
+ PV ++ AG+ K + A+ +LGW +L E
Sbjct: 249 LKKSPRLLPFPVSLIKV---GAGVLGKATLAQSLCASLQVDGDKARQMLGWEPPLDLNEG 305
Query: 220 LKERFEEYV 228
L+ EEY+
Sbjct: 306 LRLAVEEYL 314
>gi|421872943|ref|ZP_16304559.1| NAD dependent epimerase/dehydratase family protein [Brevibacillus
laterosporus GI-9]
gi|372457889|emb|CCF14108.1| NAD dependent epimerase/dehydratase family protein [Brevibacillus
laterosporus GI-9]
Length = 318
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
FF ++ K P+ I G G Q N ++V D+ LA E +A ++N+ +R ++L
Sbjct: 196 FFRAMMHKEPIQIYGDGSQSRNFSYVHDVVEANLLASEFGQAG--KVYNIGGEREISL-- 251
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A L +I+ +P A+K R A+ A +G+R T+L +
Sbjct: 252 -----LEAVSLMAKIMQVEPDITFTIAEKGDSRRTC---ADISLAAQQIGYRPHTSLEQG 303
Query: 220 LKERFEEYVKI 230
L ++F++ K+
Sbjct: 304 LYQQFQDIKKL 314
>gi|434402600|ref|YP_007145485.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
gi|428256855|gb|AFZ22805.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
Length = 314
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 23/223 (10%)
Query: 14 TNNNFRLQRPVADWAK-SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
T N + + + AK + +K +F SS+ +Y A+ P E +++ V K
Sbjct: 99 TEQNINATQVLLEAAKDAQHLKSLVFASSSSVYGDAETLPTHE-EIIPLPVSPYGVTKLA 157
Query: 73 SENFSN---------WASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNI 122
+E S R + G D FF ++ +PI G G Q +
Sbjct: 158 AERLCGIYHKNFGVPCVSLRYFTVYGPRQRPDMAFHKFFRAVLEDEAIPIYGDGQQTRDF 217
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
V DL + LA + AA IFN+ V L + A+ G P++ +Y KA
Sbjct: 218 TFVSDLIAA-NLAAASTPAAVGQIFNIGGGSRVVLAEVLDTIAEIVGKPIK-RNYIEKAM 275
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
G DA+ H A+ A+ ILG++ +L + L + ++
Sbjct: 276 G-DAR--------HTAADISKARKILGYQPQVSLRDGLTQEWQ 309
>gi|67482319|ref|XP_656509.1| dTDP-D-glucose 4,6-dehydratase [Entamoeba histolytica HM-1:IMSS]
gi|56473710|gb|EAL51122.1| dTDP-D-glucose 4,6-dehydratase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705056|gb|EMD45188.1| dTDPD-glucose 4,6-dehydratase, putative [Entamoeba histolytica
KU27]
Length = 342
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 21/227 (9%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE---K 70
T+NN + + AK++ +K+F+ +S+ +Y E ++ P + + +
Sbjct: 103 THNNIYGTHVLLEIAKANHIKRFIHVSTDEVYGQVIGNAATENSLLNPTNPYSATKAGAE 162
Query: 71 YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV--------RKRPVPIPGSGMQFTNI 122
+I+ F + SF +I GNN F ++++ R + P+ G G + +
Sbjct: 163 FIARAF--YQSFGLPLIITRGNNVFGPHQFPEKLIPKFITLLDRGKNCPLHGCGEEKRSF 220
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
+V+D+ + + + + I+N+ + R ++ + +A +P E + +
Sbjct: 221 IYVQDVVNAFDVVLR--KGIVGQIYNIGTTREISNNEVAHALLDIFQVPKE-----EQDS 273
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
I K F + Y+ + + LGWR+TT+ E LK+ E Y++
Sbjct: 274 RIYHVKNRCFNDQR-YSLDVSKLEKLGWRATTSFEEGLKKTVEWYLE 319
>gi|161527676|ref|YP_001581502.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1]
gi|160338977|gb|ABX12064.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1]
Length = 308
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWAS------- 81
VK F+ SSA +Y + P E + P A + +E Y+ F N
Sbjct: 110 VKNFIAASSAAVYGNPKQIPVTEFTIPNPVSPYGADKIALEFYLRA-FCNAYGINGIALR 168
Query: 82 FRPQYMIGSGNN-KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
F Y +G N F ++I + +P+ I G G + H+ DL + ++ N
Sbjct: 169 FFNVYGLGQSNAYAGVITKFLNQIHQTKPLRIFGDGKNTRDFIHIDDLVMGIEQSISNIS 228
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
+++NL S ++V++ +AKL + + +EI + P+
Sbjct: 229 GKRGSVYNLASGKSVSVKELAKLMLEISDKKLEIKYESPR 268
>gi|88802223|ref|ZP_01117750.1| GDP-fucose synthetase [Polaribacter irgensii 23-P]
gi|88781081|gb|EAR12259.1| GDP-fucose synthetase [Polaribacter irgensii 23-P]
Length = 317
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 58/272 (21%)
Query: 6 AKFKALFRTNN--------NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP---PH 53
AK + NN N ++Q + D A ++G+ +F+F+ S+ IY K A +P +
Sbjct: 66 AKVGGILANNNFPYQFLMENLQIQNNLIDGAHTAGIDKFIFLGSSCIYPKFAQQPLKEEY 125
Query: 54 VEGDVVKPDAGHVQVEKY--------ISENFS-NWASFRPQYMIGSGNNKDCE-EWFFDR 103
+ D ++P + K I + F+ ++ S P + G +N D E
Sbjct: 126 LLTDSLEPTNEWYSIAKITGVKACQAIRKQFNKDYVSLMPTNLFGYFDNFDLETSHVLPA 185
Query: 104 IVRK---------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSD 152
++RK V + GSG V D++ + A+EN PE ++N+ S
Sbjct: 186 MLRKFHEAKQNDNADVVLWGSGKPMREFLFVDDMAEAVVYALENELPEY----LYNVGSG 241
Query: 153 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI----- 207
+ +T+ +AK + G EI+ K G PR D+
Sbjct: 242 KDITIKELAKTIQKVTGHQGEIIWDSSKPDGT----------------PRKLMDVSKMKN 285
Query: 208 LGWRSTTNLPEDLKERFEEYVKIGRDKKAMQF 239
+GW +T E +++ + +++ D K ++
Sbjct: 286 VGWEYSTAFKEGIEKTYAWFLENIEDIKEVRL 317
>gi|345004938|ref|YP_004807791.1| NAD-dependent epimerase/dehydratase [halophilic archaeon DL31]
gi|344320564|gb|AEN05418.1| NAD-dependent epimerase/dehydratase [halophilic archaeon DL31]
Length = 317
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 90/232 (38%), Gaps = 35/232 (15%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV---VKPDAGHVQVEKYISENFSNWA 80
V + A G + F++ +++ IY +P + E V DA + E+Y +E +S++
Sbjct: 96 VVEQAMEDGCETFVYATTSSIYGSQTDPCNEEMAVKAATGYDASMMGRERY-AEYYSDFH 154
Query: 81 S-------FRPQYMIGSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRD 127
F Y GN + E+ F D+I + G G Q + HV D
Sbjct: 155 GLTLAGMRFFSVYQGYGGNEEHKGEYANTISQFADKITEDESPVLWGDGTQTRDFTHVMD 214
Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 187
+ L LA EN I+NL T + M ++ G V Y+P
Sbjct: 215 IVRGLELAAENE---LDGIYNLGVGNPFTFNEMVEMINDELGTDVP-SEYEP-------- 262
Query: 188 KAFPFRN--MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY--VKIGRDKK 235
P N H +A+P K GW + E + E Y + G+++K
Sbjct: 263 --VPLENYVYHTHADPSKFKQATGWEPEISFEEGVGMVCEPYKETESGQEEK 312
>gi|407929464|gb|EKG22293.1| hypothetical protein MPH_00360 [Macrophomina phaseolina MS6]
Length = 824
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 93/230 (40%), Gaps = 18/230 (7%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD--VVKPDAGHVQVEKY 71
TN N + + AK+ GVK+F+ IS+ +Y ++ G+ ++ P + K
Sbjct: 541 TNTNVYGTHVLLESAKAHGVKKFIHISTDEVYGEVEDNGDDLGETSLLAPTNPY-SASKA 599
Query: 72 ISENFSN--WASFRPQYMIGSGNNKDCEEWFFDRIV--------RKRPVPIPGSGMQFTN 121
+E N W SF+ +I NN F ++I+ R R + + G G
Sbjct: 600 AAEMMVNAYWKSFKLPVIIVRANNVYGPHQFPEKIIPKFTMLLHRGRKLLLHGDGTPTRR 659
Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 181
+ D++ L + A I+N+ S V+ + + + GLP +
Sbjct: 660 YLYAGDITDALDTIFH--KGAVGQIYNIASKDEVSNKDLCRRLLRLYGLPANTPEEFKR- 716
Query: 182 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG 231
++ + PF N H YA LGWR T+ E L+ + Y + G
Sbjct: 717 -WVEHTEDRPF-NDHRYATDGTKLARLGWRQQTSFEEGLRITVDWYRRFG 764
>gi|77460275|ref|YP_349782.1| NAD-dependent epimerase/dehydratase [Pseudomonas fluorescens Pf0-1]
gi|77384278|gb|ABA75791.1| putative UDP-glucose 4-epimerase [Pseudomonas fluorescens Pf0-1]
Length = 320
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 36/239 (15%)
Query: 13 RTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEP--PHVEGDVVKPD-------- 62
R N + LQ +A A ++GVK+F+FISS + EP P D P
Sbjct: 90 RVNVDGTLQ--LAQQASAAGVKRFIFISSIKVNGEQTEPDRPFTALDRPMPKDPYGVSKL 147
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSG---NNKDCEEWFFDRIVRKRPVPIP-GSGMQ 118
+ ++K E RP + G G N W + VP+P G+
Sbjct: 148 EAELALQKLAQETGMEVVIIRPPLVYGPGVRANFLSMMRWL------DKGVPLPFGAIDN 201
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-----RAVTLDGMAKLCAQAAG---L 170
++ + +L ++ +++P+AA +F LVSD L GMA+ + A L
Sbjct: 202 RRSLVSLTNLVDLVVTCIDHPKAA-GQVF-LVSDGEDLSTTTLLSGMARALGKTAALVPL 259
Query: 171 PVEIVHYDPKAAGIDAKKAFPFRNM-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
P ++ + K G K A R + R +++LGW + + L++ + Y+
Sbjct: 260 PAVLLTWPAKLLG---KGALAQRLCGSLQVDIRHTREVLGWTPPSRVERALRQTADYYL 315
>gi|425901837|ref|ZP_18878428.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397892875|gb|EJL09351.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 309
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 16/183 (8%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ LF SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIGTLNVCEAMRQAGVKRVLFASSAAVYGNNGEGESIDEDTPKAPLTPYASDKLASE 154
Query: 75 NFSNW---------ASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
+ ++ A FR + G S F +R + P+ + G G Q
Sbjct: 155 YYFDFYRRQHGLEPAIFRFFNIFGPRQDPSSPYSGVISIFCERAQKGLPITVFGDGEQTR 214
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
+ +V DL +L ++E P+ + N+ ++A TL + ++ + G P+ + Y P
Sbjct: 215 DFMYVEDLVDVLVQSLETPQLEVGAV-NVGLNQATTLKQLLEVLGEVVG-PLPPISYGPA 272
Query: 181 AAG 183
+G
Sbjct: 273 RSG 275
>gi|284036051|ref|YP_003385981.1| NAD-dependent epimerase/dehydratase [Spirosoma linguale DSM 74]
gi|283815344|gb|ADB37182.1| NAD-dependent epimerase/dehydratase [Spirosoma linguale DSM 74]
Length = 315
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 82 FRPQYMIGSG-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
P +++G G N D F ++ R V +P G++ + H D++ L
Sbjct: 154 IHPGHIVGPGWTPITPAGNLDAR--IFTKLATGREVLLPNQGLETLHHVHADDVALGFML 211
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 169
A++NP A+ F+++S+RA+T G A+ A G
Sbjct: 212 ALDNPAASIGESFHILSERAMTWRGYAQALATWYG 246
>gi|448316711|ref|ZP_21506292.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
gi|445607126|gb|ELY61020.1| NAD-dependent epimerase/dehydratase [Natronococcus jeotgali DSM
18795]
Length = 374
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEG---DVVKP-DAGHVQVEKYISENFSNWAS-- 81
A+ GV++ +ISS +Y D P E + V P +Q E + +F
Sbjct: 122 ARDRGVERVCYISSTAVYGTHDAHPITEESPLEGVGPYGEAKIQAEN-VCRDFRRMGMCV 180
Query: 82 --FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
RP+ +G + FD I VP+ G G + HVRDL + + L +
Sbjct: 181 PILRPKTFVGP-KRLGVFQVLFDWIADGANVPLVGRGDNRYQLLHVRDLVAAVELMLTGD 239
Query: 140 EAASSNIFNLVSDRAVTL 157
EAA ++ FN+ +D T+
Sbjct: 240 EAAVNDTFNVGTDEFGTM 257
>gi|302537022|ref|ZP_07289364.1| fclA [Streptomyces sp. C]
gi|302445917|gb|EFL17733.1| fclA [Streptomyces sp. C]
Length = 314
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 25/177 (14%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N R+Q V A ++GV + LF+ S+ IY K A +P P E +
Sbjct: 89 DNLRIQLSVIAGAHAAGVGRLLFLGSSCIYPKLAPQPITEDALLTGPLEPTNEAYALAKI 148
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVR---------KRPVPI 112
AG VQV+ Y + +++ S P + G G+N D + ++R + V +
Sbjct: 149 AGIVQVQSYRKQYGASYVSAMPTNLYGPGDNFDLQSSHVLPALIRRFHEAAAEGRDEVVL 208
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 169
GSG HV DL++ + +E + N+ +T+ +A+ A+ G
Sbjct: 209 WGSGTPRREFLHVDDLAAACVVLLERYDG--DEPVNIGCGEDLTIKELAETVAEVTG 263
>gi|332668502|ref|YP_004451518.1| NmrA family protein [Haliscomenobacter hydrossis DSM 1100]
gi|332337547|gb|AEE54645.1| NmrA family protein [Haliscomenobacter hydrossis DSM 1100]
Length = 289
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 19/151 (12%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+P+ D K GVK +F+S G VE + P H ++E+ I ++ +
Sbjct: 88 KPIVDTCKDEGVKHIVFLSVQG----------VENSKIIP---HHKIERLIVDSKIPYTF 134
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
RP Y + + + ++ K+ + +P +FT I VRD+ + + N A
Sbjct: 135 LRPAYFMQNFTTTLRHD-----LIHKQQIYLPAGRAKFTLID-VRDIGEVAAKILINISA 188
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
+ ++L ++T MA++ ++ G+ +
Sbjct: 189 HINQSYDLTCKESLTFSEMAEILSRNLGIDI 219
>gi|312866557|ref|ZP_07726772.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
parasanguinis F0405]
gi|311097856|gb|EFQ56085.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
parasanguinis F0405]
Length = 325
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 22/192 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ---VEKYISEN-FSN 78
V D + VK+ +++SS IY + ++ E D P H+ K SE FS+
Sbjct: 95 VLDLCREYAVKRLVYVSSPSIYAAGKDQLNIKESDA--PTENHLNNYIRSKLASEKLFSD 152
Query: 79 WAS-----FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
+ RP+ + G G+ R+ RK +P+ G Q ++ V +++ +
Sbjct: 153 YPDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALAIR 210
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP-- 191
LA+E + A ++N+ + T + + + G P+ Y AG+ A A+
Sbjct: 211 LALEAKD-AHGQVYNITNGEPKTFKYLIETTLKGLGEPIR---YRKLPAGLVAGAAYSLE 266
Query: 192 --FRNMHFYAEP 201
+R H AEP
Sbjct: 267 EVYRFFHLKAEP 278
>gi|297623712|ref|YP_003705146.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM
17093]
gi|297164892|gb|ADI14603.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM
17093]
Length = 333
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 12/155 (7%)
Query: 33 VKQFLFISSAGIYK------PADEPPHVEGDVVKPDAGHVQVEKYISENFSN----WASF 82
+Q++FISSA Y+ P E + + G + E+ +++ + +
Sbjct: 93 TRQYVFISSASAYQTPPQRLPITESTPLRNPYWRYAQGKIACEERLTQAYRDEGFPMTIV 152
Query: 83 RPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
RP + D DR+ R V + G G + H RD + + NP+A
Sbjct: 153 RPSHTYDRTLLPFDGGYTVLDRMRRGAKVIVHGDGTSLWTLTHHRDFALGFVGLLGNPQA 212
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
F++ SD +T + + L A+AAG +VH
Sbjct: 213 LG-EAFHITSDEVLTWNQIVDLVARAAGTEARVVH 246
>gi|423402075|ref|ZP_17379248.1| hypothetical protein ICW_02473 [Bacillus cereus BAG2X1-2]
gi|423477234|ref|ZP_17453949.1| hypothetical protein IEO_02692 [Bacillus cereus BAG6X1-1]
gi|401651974|gb|EJS69534.1| hypothetical protein ICW_02473 [Bacillus cereus BAG2X1-2]
gi|402430861|gb|EJV62934.1| hypothetical protein IEO_02692 [Bacillus cereus BAG6X1-1]
Length = 328
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + + G+K+ + +S+ IY DE +V + PD H K++
Sbjct: 86 NANVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDQAFMHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D V L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDERVNL 236
>gi|334132694|ref|ZP_08506450.1| UDP-glucose 4-epimerase [Methyloversatilis universalis FAM5]
gi|333442178|gb|EGK70149.1| UDP-glucose 4-epimerase [Methyloversatilis universalis FAM5]
Length = 316
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ--------V 68
N R +A+ A ++GV++FLFISS G+ P + P E D P + + +
Sbjct: 94 NVDGTRRLAEQAAAAGVRRFLFISSIGVNGPRADRPFTEDDRPAPQGSYAESKLEAETAL 153
Query: 69 EKYISENFSNWASFRPQYMIG---SGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNI 122
+ W RP + G GN F R+VR R VP+P G+ +
Sbjct: 154 REVCGRTGMEWVVIRPPLVYGPHAPGN--------FARLVRWMARGVPLPLGAVHNRRTL 205
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 169
+ +L ++ + + EAA+ +F +++ + + AQA G
Sbjct: 206 VAIDNLVDLIVTCLHS-EAAAGQLFLAGDGESLSTPELLRTVAQARG 251
>gi|119509713|ref|ZP_01628858.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Nodularia spumigena
CCY9414]
gi|119465579|gb|EAW46471.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Nodularia spumigena
CCY9414]
Length = 316
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
FF I++ +PI G G Q + V D+ + A P+A IFN+ V L
Sbjct: 195 FFKAILQDEAIPIYGDGQQTRDFTFVSDVIAANLAAATVPQAV-GEIFNIGGGSRVVLAE 253
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+ + A+ G P++ +Y KA G DA+ H A+ A+ ILG++ +L E
Sbjct: 254 VLETMAEIVGKPIQ-KNYIEKAMG-DAR--------HTAADVSKARQILGYQPQVSLREG 303
Query: 220 LKERFE 225
L + ++
Sbjct: 304 LTQEWQ 309
>gi|342218639|ref|ZP_08711249.1| NAD dependent epimerase/dehydratase family protein [Megasphaera sp.
UPII 135-E]
gi|341589509|gb|EGS32784.1| NAD dependent epimerase/dehydratase family protein [Megasphaera sp.
UPII 135-E]
Length = 309
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 29/224 (12%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-- 81
V D ++ +K+F+F SSA +Y + P E + V+P + + + K +E +
Sbjct: 100 VLDLCRTYHIKKFIFSSSAAVYGDNQQLPLQETEPVEPTSFY-GLTKATAEAYIQMYHRL 158
Query: 82 FRPQYMI-----------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
+R Y+I GS F +R+V ++ + I G G Q + +V+D++
Sbjct: 159 YRLPYVILRYANVYGERQGSNGEGGVVYIFANRLVHQQALTIFGDGTQTRDFIYVKDVAQ 218
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMA-KLCAQAAGLPVEIVHYDPKAAGIDAKKA 189
A+E+ A S I+N+ + + T++ + +L + A P + Y +G +
Sbjct: 219 ANVAALES--AIRSGIYNVSTAKETTIEEIKNQLVSFATYQPT--IRYQAVRSGDIYRSV 274
Query: 190 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
R R K+ L W+ +L L++ + Y K+G +
Sbjct: 275 LDNR--------RTIKE-LKWKPQVDLRTGLQQTY-AYFKMGEE 308
>gi|229819677|ref|YP_002881203.1| NAD-dependent epimerase/dehydratase [Beutenbergia cavernae DSM
12333]
gi|229565590|gb|ACQ79441.1| NAD-dependent epimerase/dehydratase [Beutenbergia cavernae DSM
12333]
Length = 310
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 34/219 (15%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNW 79
A GV++F+ SSA +Y + P E D + P G + Y +W
Sbjct: 110 AADHGVERFVLASSASVYGDPKKLPMHEDDELSPLTPYCISKRTGEDLLAYYQRRAGLSW 169
Query: 80 ASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ R + G G F +RI P I G G Q + HV D++ + L
Sbjct: 170 IALRFFNVYGPGQKTTAYYTSVINHFVNRIKNGEPPVIDGKGEQSMDFIHVHDIARAVVL 229
Query: 135 AVENPEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
A+E+ + SN+ N+ + T+ +A++ A G VE + ++P+ + + A R
Sbjct: 230 AMESEQ---SNVPVNVGTGIDTTVADLARILIDAVGADVEPI-FNPRDVLVSRRAADTTR 285
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPE-DLKERFEEYVKIG 231
AK++LG+ +PE +++ E +++G
Sbjct: 286 ----------AKEVLGF-----VPEIAVEDGMTELIRLG 309
>gi|283778335|ref|YP_003369090.1| NAD-dependent epimerase/dehydratase [Pirellula staleyi DSM 6068]
gi|283436788|gb|ADB15230.1| NAD-dependent epimerase/dehydratase [Pirellula staleyi DSM 6068]
Length = 328
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 31/176 (17%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE----GDVVKP---------- 61
NN + + A+ V+QFLF SS+ +Y P E G+ V P
Sbjct: 104 NNIEATLVLLELARQHRVEQFLFASSSTVYGSGAAAPFAEDAPMGNPVSPYGVSKRAAEQ 163
Query: 62 ---DAGHVQVEKYISENFSN--WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG 116
+ H+ ++S F N RP+ + + F I+R P+ + G G
Sbjct: 164 LGFNYHHLYQIPFVSLRFFNAYGIRIRPELALAA---------FTRAILRGEPLKLFGDG 214
Query: 117 MQFTNIAHVRDLSSMLTLAVENPE---AASSNIFNLVSDRAVTLDGMAKLCAQAAG 169
+ HV D++ L +E+P A + FNL S +T+ + + AAG
Sbjct: 215 SALRDFTHVTDIAQGLLQTLEHPHFATAVAGEAFNLGSCAPITVRQLIDMIEAAAG 270
>gi|229032901|ref|ZP_04188856.1| GDP-fucose synthetase [Bacillus cereus AH1271]
gi|228728446|gb|EEL79467.1| GDP-fucose synthetase [Bacillus cereus AH1271]
Length = 314
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 46/242 (19%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N +Q V D A SGV++ LF+ S IY +P E + G++ +
Sbjct: 83 DNLMIQTNVIDSAYRSGVEKLLFLGSTCIYPKLAPQPLKEEYLLTGELEPTNEPYALAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG E Y + + + S P + G +N D ++RK V +
Sbjct: 143 AGIKMCESYNRQYGTKYISAMPTNLYGENDNFDLHTSHVLPALIRKFHEAKENNAEFVEV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G + DL+ + N E + I N+ + +++ +A+ G
Sbjct: 203 WGTGTPLREFLYSDDLADACVYLMNNYEG--NEIVNIGVGKDLSIKELAEKVKATVGFTG 260
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
E+ K G PR D+ LGW++TT+L E LK+ ++ +
Sbjct: 261 ELRFDTSKPDGT----------------PRKLVDVTKINALGWKATTSLDEGLKKAYDWF 304
Query: 228 VK 229
++
Sbjct: 305 LE 306
>gi|118469570|ref|YP_890182.1| NAD dependent epimerase/dehydratase [Mycobacterium smegmatis str.
MC2 155]
gi|399990174|ref|YP_006570524.1| UDP-glucose 4-epimerase [Mycobacterium smegmatis str. MC2 155]
gi|118170857|gb|ABK71753.1| NAD dependent epimerase/dehydratase family protein [Mycobacterium
smegmatis str. MC2 155]
gi|399234736|gb|AFP42229.1| UDP-glucose 4-epimerase, GalE5 [Mycobacterium smegmatis str. MC2
155]
Length = 323
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 27/228 (11%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV--KPD---------AGH 65
N L V A GV++ +++SS+ +++ A + P E ++ +P G
Sbjct: 92 NTGLYNSVFSAALREGVERLVYVSSSMVFEQATQFPTTEEHLLDCRPPRSAYGFSKLTGE 151
Query: 66 VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI---VRK-----RPVPIPGSGM 117
+ E+ + RP G G D E + +RK P+ I GSG
Sbjct: 152 IYCRAVHEEHGLPFTICRPFNAYGPGELPDTEPGIAHAVPDLIRKALSGQHPLQIFGSGT 211
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 177
Q + HV D++ + A+ +P A + FN+ + T+ +A++ A GL
Sbjct: 212 QTRTLTHVDDIADGIVTAMFHP-AGENQDFNISASEEHTIAEIAQMIWTACGL------- 263
Query: 178 DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
DP+ ++ F + A+ +LGW++ +L + + E
Sbjct: 264 DPEDFALENVPTFEVDVQRRWPSVEKARMLLGWQARVDLRDGIATTVE 311
>gi|323703005|ref|ZP_08114661.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans
DSM 574]
gi|333924728|ref|YP_004498308.1| UDP-glucose 4-epimerase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532018|gb|EGB21901.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans
DSM 574]
gi|333750289|gb|AEF95396.1| UDP-glucose 4-epimerase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 306
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV----QVEKYI---SENFS-NW 79
A+ V + +F SSA +Y + P E ++P +G+ VE+Y+ E + +W
Sbjct: 103 ARRVKVGKMVFASSAAVYGNPNYLPVDEDHDLRPLSGYGISKHTVERYLEAYQELYGLSW 162
Query: 80 ASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
+ R + G + E F D+++ + I G G Q + +V+D+++ A
Sbjct: 163 TALRYANVYGPRQDAQGEGGVVAVFIDKLLHNQRPQIFGDGEQTRDFVYVKDVAAANVAA 222
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 195
+ A + I N+ + +A T++ + L Q G +E + P+ I +
Sbjct: 223 LS---AGDNQILNISTGKASTVNELYSLLKQTIGSALEPEYAPPRPGDI----------V 269
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
H Y + A L W+ L LKE E Y++
Sbjct: 270 HSYLDNSKAVARLNWQPQYELARGLKETVEHYLR 303
>gi|427416613|ref|ZP_18906796.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
gi|425759326|gb|EKV00179.1| nucleoside-diphosphate-sugar epimerase [Leptolyngbya sp. PCC 7375]
Length = 316
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 36/233 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N ++ V A +GVK+ LF+ S+ IY K A +P P E +
Sbjct: 83 DNLMIEANVIHSAYKTGVKKLLFLGSSCIYPKLAPQPMREEYLLTGFLEPTNEPYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW---------FFDRIVRKRPVP-I 112
AG E Y + N+ S P + G +N D F + + +P +
Sbjct: 143 AGLKLCENYCRQYGVNFISAMPTNLYGINDNFDLANSHVLPALMRKFHEAKLANQPTADV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
GSG +V DL+ L ++N E N+ S + +++ +A G
Sbjct: 203 WGSGNPLREFLYVDDLADGLLFMMDNYEGIE--FVNIGSSKEISIKELALTIKDVVGYEG 260
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
EIV K G K +P D LGW++ T+L E + + ++
Sbjct: 261 EIVFDSSKPDGTPRK----------LMDPSKLTD-LGWQAQTSLQEGIAQTYD 302
>gi|303248850|ref|ZP_07335099.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans
JJ]
gi|302489719|gb|EFL49652.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans
JJ]
Length = 319
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 90/241 (37%), Gaps = 46/241 (19%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N + V D AK++GVK+ +F+ S+ IY +P E + G + +
Sbjct: 88 DNLLIATHVIDAAKNAGVKKLVFLGSSCIYPKLAPQPMREDCLLTGPLESTNQWYAIAKI 147
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNN----------KDCEEWFFDRIVRKRPVPI 112
AG + Y + + S P + G G+N + R+ + V +
Sbjct: 148 AGIKMCQAYRRQYGFSAISLMPTNLYGPGDNFTPVNSHVIPGLMRRFHEARLAGSKQVAV 207
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G HV D++ + A I N+ S + VT+ +A L A+ G
Sbjct: 208 WGTGNALREFLHVDDMARAAVACYLRYDDA--EIVNIGSGQEVTIRELATLMAKITGYQG 265
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
EIV K G PR A DI LGW T +L L E + +
Sbjct: 266 EIVFDASKPDG----------------TPRKALDIGRLRSLGWEPTFSLETGLAETYRWF 309
Query: 228 V 228
Sbjct: 310 C 310
>gi|398935330|ref|ZP_10666418.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM41(2012)]
gi|398169816|gb|EJM57786.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM41(2012)]
Length = 309
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 20/185 (10%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ L+ SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIGSLNVCEAMRQTGVKRVLYASSAAVYGNNGEGESIDEDTPKAPLTPYASDKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKDCEE-------WFFDRIVRKRPVPIPGSGMQ 118
++ ++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 155 HYFDF--YRRQHGLEPVIFRFFNIFGPRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
+ +V DL +L A+E P+ + N+ ++A TL M + G P+ V Y
Sbjct: 213 TRDFVYVEDLVDLLVQAIEKPQVEVGAV-NVGWNQATTLKQMLEALEAVVG-PLPPVSYG 270
Query: 179 PKAAG 183
P +G
Sbjct: 271 PARSG 275
>gi|383111489|ref|ZP_09932300.1| hypothetical protein BSGG_4326 [Bacteroides sp. D2]
gi|313696791|gb|EFS33626.1| hypothetical protein BSGG_4326 [Bacteroides sp. D2]
Length = 335
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 19/161 (11%)
Query: 33 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLTDYRITESTPLVNPYWQYSKNKIEAEEVLMSAYRTSGFPV-TI 146
Query: 82 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVAVHGDKGNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N F++ +D ++T + + + A A P+ +H
Sbjct: 207 MANPHAI-GNAFHITTDESMTWNQIYQTIADALDKPLNALH 246
>gi|452954631|gb|EME60031.1| UDP-glucose 4-epimerase [Amycolatopsis decaplanina DSM 44594]
Length = 309
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 28/209 (13%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNW 79
A GV++ +F S+A +Y P E D +KP AG + Y +W
Sbjct: 109 AADEGVERLVFASTASVYGDPKRLPMHEDDELKPLTPYCISKRAGEDMLGFYERTKGLSW 168
Query: 80 ASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ R + G G + F R+ +P I G G Q + HV DL+ +
Sbjct: 169 NALRFFNVYGPGQKIEAYYTSVINHFIQRLRAGQPPIIDGRGDQSMDFVHVTDLARAVVA 228
Query: 135 AVENPEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
A+E+ +A N+ N+ + ++ +AK+ A G+ VE + ++ + + + A R
Sbjct: 229 ALESEQA---NLPINIGTGIDTSIATLAKILIDAVGVNVEPL-FNERDVLVSRRAADITR 284
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
A+++LGW ++ E + E
Sbjct: 285 ----------AREVLGWEPKISVEEGMYE 303
>gi|440685361|ref|YP_007160153.1| UDP-glucose 4-epimerase [Anabaena cylindrica PCC 7122]
gi|428682621|gb|AFZ61383.1| UDP-glucose 4-epimerase [Anabaena cylindrica PCC 7122]
Length = 317
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F DR K+P+ I G G V DL+ LA++ + A++ ++NL R VTL
Sbjct: 180 FLDRAFTKQPLTIFGDGSASRKFVFVEDLAQAHVLALQ--DIAANQVYNLEGMRFVTLKE 237
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A+L ++ I YDP G N A LGW+ +L E
Sbjct: 238 LAELVSKLVDEVDIIYQYDPSRRG-------ELDNYRKIISANKAYIELGWQPHIDLEEG 290
Query: 220 LKERFEEYVK 229
++ Y K
Sbjct: 291 VRRTINWYQK 300
>gi|312194092|ref|YP_004014153.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c]
gi|311225428|gb|ADP78283.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c]
Length = 321
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 36/232 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
NN +Q V A +G ++ LF+ S+ IY K A +P P E +
Sbjct: 85 NNLHIQLNVISSAWRAGTEKLLFLGSSCIYPKFAAQPITEDALLTGPLEPTNEAYAIAKI 144
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR----------PVPI 112
AG Q++ Y E +++ S P + G G+N D E + R V +
Sbjct: 145 AGITQIQSYRREYGAHYVSAMPTNVYGPGDNFDLETSHVLPALIHRFHLATERGDSEVTL 204
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
GSG HV DL+ +E + + N+ + VT+ +A+L A G
Sbjct: 205 WGSGTPRREFIHVDDLADACATILEKYDDPAP--INVGTGTDVTIRELAELVADVVGF-T 261
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
+++DP +K + + LGW+ + +L + ++ F
Sbjct: 262 GTINFDPAKPDGTPRKLLDVSKL----------EGLGWKPSISLRDGIESTF 303
>gi|343084037|ref|YP_004773332.1| NAD-dependent epimerase/dehydratase [Cyclobacterium marinum DSM
745]
gi|342352571|gb|AEL25101.1| NAD-dependent epimerase/dehydratase [Cyclobacterium marinum DSM
745]
Length = 352
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY 71
F + N+R +A AK +GVK F+F SS +Y AD+ P E D + P + + K
Sbjct: 92 FTLDVNYRSCINLAKMAKKAGVKHFVFASSCSMYGAADDYPKTEEDTLNPLTAYAR-SKV 150
Query: 72 ISEN-FSNWAS 81
+SEN +N AS
Sbjct: 151 MSENDLNNLAS 161
>gi|318060938|ref|ZP_07979659.1| hypothetical protein SSA3_23540 [Streptomyces sp. SA3_actG]
gi|318076765|ref|ZP_07984097.1| hypothetical protein SSA3_08592 [Streptomyces sp. SA3_actF]
Length = 345
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 43/227 (18%)
Query: 28 AKSSG-VKQFLFISSAGIYKPADEPPH-----VEGDVVKPDA--------GHVQVEKYIS 73
A+ SG +K+ +F+SSA +Y E P EGD + P + G Q +S
Sbjct: 122 ARHSGTLKRLVFVSSASVYGRGPEAPTRAARFSEGDELHPVSVYANTKVWGEHQTALALS 181
Query: 74 ENFSNWASFR-------PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 126
++A R PQ ++ ++ W+ R P+P+ G G Q + HV
Sbjct: 182 GRDDSYAVVRYFSVYGEPQ-VVKENSHSWVVAWYAMRAALGLPLPLNGGGKQIRDFVHVD 240
Query: 127 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA----QAAGLPVEIVHYDPKAA 182
D++ LA +P A + + N+ + RA ++ +A L +AA + + DP A
Sbjct: 241 DIADATLLAALSPRAHRATL-NVGTGRATSIREIADLVRLHHPEAALVHTPLPQGDPLGA 299
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
AE K+IL W + E + +R+ +++
Sbjct: 300 ---------------RAETTRMKEILRWEHAIGIEEGV-QRYMRWLE 330
>gi|334342734|ref|YP_004555338.1| hypothetical protein [Sphingobium chlorophenolicum L-1]
gi|334103409|gb|AEG50832.1| hypothetical protein Sphch_3221 [Sphingobium chlorophenolicum L-1]
Length = 311
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
RP + G+G W F+ + R G G+ + HV DL+ + LA+E +A
Sbjct: 156 RPPMIWGNGGGNGQVAWMFEAVERMGAACYLGMGLNLYSGVHVDDLADVYALALERGQAG 215
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 202
+ +++ VS V +A+ Q G P + YD + + ++ P+R + R
Sbjct: 216 A--LYHAVSGE-VNWRTIAEAVGQVMGCPARSISYD-EMCKLWGEQDAPYR-FGVSSRSR 270
Query: 203 AAK--DILGWRSTT-NLPEDLK 221
A K + LGW T +L +D++
Sbjct: 271 AVKTREHLGWAPTRPDLIDDIR 292
>gi|301060431|ref|ZP_07201290.1| NAD dependent epimerase/dehydratase family protein [delta
proteobacterium NaphS2]
gi|300445485|gb|EFK09391.1| NAD dependent epimerase/dehydratase family protein [delta
proteobacterium NaphS2]
Length = 312
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 28/224 (12%)
Query: 33 VKQFLFISSAGIYK-----------PADEPPHVEGDVVKPDAGHVQVEKYISENFSN--- 78
+ +++IS+ IY+ P P +E + P A K++ E
Sbjct: 91 IDHYIYISTTSIYENTTNLPVNEDAPKLSAPQLE---LGPLAADYAFNKWLCERKLQFEC 147
Query: 79 ------WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+ RP + G N E +FFD I PV +P + + N +V DL+ ++
Sbjct: 148 PRRGIAYTCLRPVIIYGPYNYAPRETYFFDLISNNEPVIVPDNDLPLFNFLYVVDLAKII 207
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD-PKAAGIDAKKAFP 191
+ N + + FN+ S++ V+ G+ + + + I P+ FP
Sbjct: 208 QECIGNRDVFNQA-FNVCSEQLVSYQGLMDVFEKVCSKKISIRKLSVPEIEKRQIPLPFP 266
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK 235
+ Y+ + + +LG+ T+ ED + +Y ++ +D K
Sbjct: 267 LDSHLVYSGTKLQR-LLGFEYTS--VEDGMKATYDYYRLVQDAK 307
>gi|427406806|ref|ZP_18897011.1| hypothetical protein HMPREF9161_01371 [Selenomonas sp. F0473]
gi|425707779|gb|EKU70822.1| hypothetical protein HMPREF9161_01371 [Selenomonas sp. F0473]
Length = 326
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 23/196 (11%)
Query: 45 YKPADE-----PPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNN-KDCEE 98
Y P DE PP V G + K A H + Y S R G G K+ +
Sbjct: 136 YLPVDENHPLAPPDVNG-INKLAAEHYH-QLYTKVYGVRTVSLRLTNTYGPGQLIKNARQ 193
Query: 99 ----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 154
WF +R V + + G+G Q + +V D+ + LA + E A ++FNL +RA
Sbjct: 194 GFIGWFVNRAVTGETIQLFGTGEQLRDFNYVDDVVEAMCLAALH-EDAYGDVFNLSGERA 252
Query: 155 VTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST 213
+L +A+ + +G ++IV + + ID FY + +GW+
Sbjct: 253 -SLKTVAETLIRLSGKGDLQIVPFPEERKKIDIGD--------FYGTSEKIEKRIGWKPK 303
Query: 214 TNLPEDLKERFEEYVK 229
L + L+ E Y++
Sbjct: 304 VGLEDGLRRMVEYYMR 319
>gi|414155533|ref|ZP_11411845.1| hypothetical protein HMPREF9186_00265 [Streptococcus sp. F0442]
gi|410873506|gb|EKS21441.1| hypothetical protein HMPREF9186_00265 [Streptococcus sp. F0442]
Length = 325
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 26/194 (13%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA-GHVQVEKYISENFSNWASF 82
V D + VK+ +++SS IY + + D+ + DA + YI ++ F
Sbjct: 95 VLDLCREYAVKRLVYVSSPSIYAAGKD----QFDIKESDAPKENHLNNYIRSKLASEKLF 150
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ R+ RK +P+ G Q ++ V +++
Sbjct: 151 PDYPDVPSIILRPRGLFGVGDTSILPRVL--RLSRKIGIPLIRGGEQLMDMTCVENVALA 208
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 191
+ LA+E E A ++N+ + T + + + G P + Y AG+ A A+
Sbjct: 209 IRLALEAKE-AHGQVYNITNGEPKTFKYLIETTLKGLGEP---IRYRKIPAGLVAGVAYS 264
Query: 192 ----FRNMHFYAEP 201
+R H AEP
Sbjct: 265 LEGLYRLFHLKAEP 278
>gi|297584958|ref|YP_003700738.1| NmrA family protein [Bacillus selenitireducens MLS10]
gi|297143415|gb|ADI00173.1| NmrA family protein [Bacillus selenitireducens MLS10]
Length = 290
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 93/220 (42%), Gaps = 43/220 (19%)
Query: 23 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
P + AK +G+ + +F+S G+ + P H ++E++I + N+
Sbjct: 90 PFINAAKEAGISRIVFVSLLGVER-------------NPFVPHRKIEQFIRSSGINYTFL 136
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
RP + + + + +++ VP+ G T+ RD++S+ + + + +
Sbjct: 137 RPSFFMQNLTTTHRSDIAIHKLLD---VPV---GKALTSFIDTRDIASVAAVCLTS-DLH 189
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPR 202
+ + L +RA+ D MA + +P+E Y PK+ K+ F P+
Sbjct: 190 QNKSYTLTGNRAIGYDEMANTLSHVLEIPIE---YQPKSPAKFRKRLI------FDGTPK 240
Query: 203 AAKDI------LGW----RSTTNLPEDLKER----FEEYV 228
A ++ + W + TT +D+ +R F+++V
Sbjct: 241 AFANVMTLLYLMTWAGTAKKTTRTVQDILQREPIAFDQFV 280
>gi|110635113|ref|YP_675321.1| NAD-dependent epimerase/dehydratase [Chelativorans sp. BNC1]
gi|110286097|gb|ABG64156.1| NAD-dependent epimerase/dehydratase [Chelativorans sp. BNC1]
Length = 369
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R+ +P I G Q + HVRD++ LA+E+ AA + N+ S A T+
Sbjct: 228 FASRLANNQPPLIFEDGRQKRDFVHVRDVARAFRLALESKTAA-GQVINVGSGNAYTIQQ 286
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A++ A A GL + K ++ ++ R H +A+ A D+LG+ L ED
Sbjct: 287 VAEILADAMGLA------EIKPEIMNKMRSGDIR--HCFADISKAHDLLGFEPQHRL-ED 337
Query: 220 LKERFEEYVK 229
F E+V+
Sbjct: 338 TVAEFAEWVR 347
>gi|334319879|ref|YP_004556508.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83]
gi|334097618|gb|AEG55628.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83]
Length = 368
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G Q + HVRD++ LA+E P AA ++ N+ S A + +A L A+A G+P
Sbjct: 243 GRQKRDFVHVRDVARAFRLALEQPHAA-GHVINIGSGNAYAIADIASLLAEAMGVP---- 297
Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+P+ ++ ++ RN +A+ A+D+LG+ L + L + F ++V+
Sbjct: 298 EIEPEI--MNKARSGDIRNC--FADIAKARDLLGFEPAHRLEDSLAD-FAQWVR 346
>gi|146278465|ref|YP_001168624.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC
17025]
gi|145556706|gb|ABP71319.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC
17025]
Length = 368
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G Q + HVRD++ LA+E P+AA + N+ S A T+ G+A+L A A G P EI
Sbjct: 243 GEQKRDFVHVRDVARAFRLALETPDAA-GEVINVGSGTAYTISGVARLLAGAMGRP-EIT 300
Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
P+ ++ + RN +A+ A+ ILG+ L + L E
Sbjct: 301 ---PEI--LNRARTGDIRNC--FADIGKARAILGFEPRHRLEDSLDE 340
>gi|423399890|ref|ZP_17377063.1| hypothetical protein ICW_00288 [Bacillus cereus BAG2X1-2]
gi|401656517|gb|EJS74032.1| hypothetical protein ICW_00288 [Bacillus cereus BAG2X1-2]
Length = 314
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 46/246 (18%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N +Q V D A SGV++ LF+ S IY +P E + G++ +
Sbjct: 83 DNLMIQTNVIDSAYRSGVEKLLFLGSTCIYPKLAPQPLKEEYLLTGELEPTNEPYALAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG E Y + + + S P + G +N D ++RK V +
Sbjct: 143 AGIKMCESYNRQYGTKYISAMPTNLYGKNDNFDLHTSHVLPALIRKFHEAKENNAEFVEV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G + DL+ + N E + I N+ +++ +A+ G
Sbjct: 203 WGTGTPLREFLYSDDLADACVYLMNNYEG--NEIVNIGVGEDLSIKELAEKVKATVGFTG 260
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
E+ K G PR D+ LGW++TT+L E LK+ ++ +
Sbjct: 261 ELRFDTSKPDGT----------------PRKLVDVTKINALGWKATTSLDEGLKKAYDWF 304
Query: 228 VKIGRD 233
++ ++
Sbjct: 305 LQTEKE 310
>gi|448374298|ref|ZP_21558183.1| NAD-dependent epimerase/dehydratase [Halovivax asiaticus JCM 14624]
gi|445660975|gb|ELZ13770.1| NAD-dependent epimerase/dehydratase [Halovivax asiaticus JCM 14624]
Length = 337
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + +++ DRI R V +PG G + +V D++S + + E
Sbjct: 153 NAMSVRPPIVYGPHDYTERLDYWIDRIHRFDRVVLPGDGTNLWHRVYVEDVASGMRIVAE 212
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQA 167
E + +N+ RAVTL GM +L ++
Sbjct: 213 EGEPGEA--YNVGDQRAVTLRGMLELIDES 240
>gi|309789950|ref|ZP_07684526.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides
DG-6]
gi|308227970|gb|EFO81622.1| NAD-dependent epimerase/dehydratase [Oscillochloris trichoides DG6]
Length = 320
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 26 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAGHVQVEKYISENFSNWAS 81
+ A+ GV+QF+ S++ +Y A++ P E D + P A + + ++ F + +
Sbjct: 112 ELARQYGVEQFVLASTSSVYGKAEKLPFEEDDRTDQPLSPYAATKKAAEVLAYTFHSLYA 171
Query: 82 F-----RPQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTL 134
R + G D + F D++VR P + G+ F + +V D+ + +
Sbjct: 172 MPMSVVRFFTVYGPRGRPDMTPYLFVDKMVRGEPFVLFNRGINLFRDYTYVDDIVAGVVA 231
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI 174
A++ P A IFNL + + V + L Q G P +I
Sbjct: 232 ALDRP--AGYQIFNLGNSQPVEMCRFVGLLEQITGYPAQI 269
>gi|237751854|ref|ZP_04582334.1| GDP-fucose synthetase [Helicobacter winghamensis ATCC BAA-430]
gi|229376754|gb|EEO26845.1| GDP-fucose synthetase [Helicobacter winghamensis ATCC BAA-430]
Length = 192
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPDA 63
N ++ V A SGVK+ +FI+S IY P DE ++GD+ + A
Sbjct: 19 NLMIECNVIHNAYLSGVKKLVFIASTAIYPKNAIMPTDEDQMLKGDLEYSHKPYAIAKIA 78
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE 97
G V E Y +N +N+ S P + G+ +N + E
Sbjct: 79 GLVMCESYNLQNHTNFLSIVPTNLYGNNDNFNLE 112
>gi|229173888|ref|ZP_04301426.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus MM3]
gi|228609526|gb|EEK66810.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus MM3]
Length = 326
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + + G+K+ + +S+ IY DE +V + PD H K++
Sbjct: 84 NANVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHM 143
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 144 AEQAIDQAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTEDVLVDITY 201
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D V L
Sbjct: 202 VENVVDALLLCMHSPKHTLGQKYNITNDERVNL 234
>gi|257389175|ref|YP_003178948.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM
12286]
gi|257171482|gb|ACV49241.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM
12286]
Length = 328
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
S RP + G + + +++ DR+ V +PG G+ + +V D++S L + E+
Sbjct: 157 SVRPTVVYGPHDYTERFDYWIDRVDNHDRVAVPGDGLSLWQLVYVEDVASALRVVAESGT 216
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE---IVHYDPKAAGIDAKKAFPFRNMHF 197
A + +N+ D TL L A A VE + + + G+++ + FP
Sbjct: 217 AGEA--YNVGDDHVPTLGEWVDLLAAACDTTVERVAVSERELRRVGLESTE-FPLYRASP 273
Query: 198 YAEPRAAKDILGWRST 213
+ A LGW ST
Sbjct: 274 HLLSTAKLRSLGWSST 289
>gi|451818795|ref|YP_007454996.1| nucleoside-diphosphate-sugar epimerase [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784774|gb|AGF55742.1| nucleoside-diphosphate-sugar epimerase [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 276
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 83
+ ++++ +GVKQF++IS+ G+Y + P E + P G + KY SE +
Sbjct: 90 LLEYSRKTGVKQFIYISTGGVY-GFESNPFKEEEQCNP-HGIYSLSKYFSEKLCMEYQNK 147
Query: 84 PQYMI-------GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
+ I G G +I++ V + GM N ++ DL +++ V
Sbjct: 148 IKITIIRVFFPYGKGQKGRLISNLIHKILKGEKVILNNEGMPLINPINIVDLCNLINGVV 207
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 170
E IFN D V++ + + + G+
Sbjct: 208 EKRLEG---IFNACGDEIVSIKELCQRISDKFGI 238
>gi|425449032|ref|ZP_18828876.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 7941]
gi|389765118|emb|CCI08928.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 7941]
Length = 326
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYISE----NFSNWA 80
+GVK F+F+SS I+ A E ++ E PD+ + +Q E+ + E + W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDNILNENSPCHPDSPYGRSKLQAEQALIEIAKDSDMTWT 164
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENP 139
RP + G GN + E +++ KR +P+P G+ + V +L + + +++P
Sbjct: 165 ILRPTLVYGLGNRANMERLM--KLI-KRGLPLPFGAIKNRRSFVFVGNLVAAIITCLDHP 221
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
AA + IF + ++AV+ + +L AQ P +++
Sbjct: 222 NAA-NQIFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|379005004|ref|YP_005260676.1| UDP-glucose 4-epimerase [Pyrobaculum oguniense TE7]
gi|375160457|gb|AFA40069.1| UDP-glucose 4-epimerase [Pyrobaculum oguniense TE7]
Length = 299
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F +R P I GSG Q + HV D++ + VE + +FN+ + RAV++
Sbjct: 180 FIERARAGLPPVIFGSGEQTRDFVHVLDVARFVETLVEK---GAQGVFNVGTGRAVSIKE 236
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A++ + AG+ E ++ P+ P H A + A+ LGW L E
Sbjct: 237 LARVVMKLAGIGGEPIYASPR----------PGDIAHSVANIKKARG-LGWEPKITLEEG 285
Query: 220 LKERFE 225
L + ++
Sbjct: 286 LAQLWD 291
>gi|423592877|ref|ZP_17568908.1| hypothetical protein IIG_01745 [Bacillus cereus VD048]
gi|401229542|gb|EJR36057.1| hypothetical protein IIG_01745 [Bacillus cereus VD048]
Length = 328
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + + G+K+ + +S+ IY DE +V + PD H K++
Sbjct: 86 NANVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDQAFTHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D V L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDDRVNL 236
>gi|229167882|ref|ZP_04295613.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
AH621]
gi|228615522|gb|EEK72616.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus cereus
AH621]
Length = 326
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + + G+K+ + +S+ IY DE +V + PD H K++
Sbjct: 84 NANVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHM 143
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 144 AEQAIDQAFTHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 201
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D V L
Sbjct: 202 VENVVDALLLCMHSPKHTLGQKYNITNDDRVNL 234
>gi|441497952|ref|ZP_20980157.1| GDP-L-fucose synthetase [Fulvivirga imtechensis AK7]
gi|441438289|gb|ELR71628.1| GDP-L-fucose synthetase [Fulvivirga imtechensis AK7]
Length = 319
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 90/237 (37%), Gaps = 36/237 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N +Q V + SGV++ LF+ S+ IY K A +P P E +
Sbjct: 90 DNLAIQNNVIHQSFKSGVRKLLFLGSSCIYPKYAQQPMKEEALLTGSLEPTNEPYAIAKI 149
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-WFFDRIVRK---------RPVPI 112
AG + Y ++ SN+ S P + G +N D E ++RK R V I
Sbjct: 150 AGIKLCQAYHAQYGSNFISLMPTNLYGPNDNYDLENAHVLPALIRKIHEAKTKDERDVEI 209
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G HV DL+ + N + I N+ + + +++ +A L G
Sbjct: 210 WGTGTVRREFLHVDDLADACLFLMNN--YSKPGIINVGTGKDLSIYELALLLKSVIGYKG 267
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+ K G K R H +GW L E +++ + EY K
Sbjct: 268 RLRFNPAKPDGTPRKLLDTTRINH-----------MGWYPKIELWEGIQKVYAEYEK 313
>gi|322421638|ref|YP_004200861.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18]
gi|320128025|gb|ADW15585.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18]
Length = 332
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 104 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 163
+V + + + G G Q + ++V D+ + L + E A+ IFNL +D + L A+L
Sbjct: 204 LVEGKELQVFGDGKQIRDFSYVDDVVEAMLLCAAS-EDANGEIFNLGADDPINLKDTAEL 262
Query: 164 CAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
+ AG +V + ID +YA+ R + LGW+ + L E L+
Sbjct: 263 LTRVAGSGSYRMVPFPADRKAIDIGD--------YYADYRKIRAKLGWKPSVPLEEGLRR 314
Query: 223 RFEEY 227
E Y
Sbjct: 315 TLEYY 319
>gi|148269553|ref|YP_001244013.1| NAD-dependent epimerase/dehydratase [Thermotoga petrophila RKU-1]
gi|147735097|gb|ABQ46437.1| NAD-dependent epimerase/dehydratase [Thermotoga petrophila RKU-1]
Length = 309
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 27/212 (12%)
Query: 32 GVKQFLFISSAG-IY--------KPADEPPH-VEGDVVKPDAGHVQVEKYISENFSNWAS 81
GVK+F+F S+ G IY P E PH + + + + +E + E +
Sbjct: 108 GVKKFIFSSTGGAIYGENVKVFPTPETETPHPISPYGIAKYSIEMYLEFFAREYGLKYTV 167
Query: 82 FRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
R + G + E F +R++R V I G G + +V D+ LA+E
Sbjct: 168 LRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAME 227
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 197
+ +FN+ + R T++ + KL + G E V+ P+ D +K+
Sbjct: 228 K---GDNEVFNIGTGRGTTVNQLFKLLKEITGYDKEPVYKPPRKG--DVRKSI------- 275
Query: 198 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+ AK+ LGW L E LK E + K
Sbjct: 276 -LDYTKAKEKLGWEPKIPLEEGLKLTVEYFRK 306
>gi|163940887|ref|YP_001645771.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis
KBAB4]
gi|163863084|gb|ABY44143.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis
KBAB4]
Length = 328
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + + G+K+ + +S+ IY DE +V + PD H K++
Sbjct: 86 NANVLGTKHIIEGCQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKHM 145
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 146 AEQAIDQAFMHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 203
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + +P+ +N+ +D V L
Sbjct: 204 VENVVDALLLCMHSPKHTLGQKYNITNDVRVNL 236
>gi|398333106|ref|ZP_10517811.1| nucleoside-diphosphate-sugar epimerase [Leptospira alexanderi
serovar Manhao 3 str. L 60]
Length = 314
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 94/239 (39%), Gaps = 38/239 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D VK+ +F+ S+ IY +P DE ++G + +
Sbjct: 83 SNLQIQNNIIDACYRFKVKKLVFLGSSCIYPKFAKQPMDEGQLLDGKLEPTNEPYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F++ ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFYEAKIKNLPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVEN----PEAASSNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D++ +EN +A N+ S V++ +A+ +
Sbjct: 203 WGTGKPLREFLYSDDMARACVFLMENYDVTGDAKGGEHINVGSGIEVSIRELAETVKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
G ++ +D +K +H +GWR L E ++ FE++
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWRHQVELKEGIRLAFEDF 310
>gi|418474583|ref|ZP_13044068.1| reductase, partial [Streptomyces coelicoflavus ZG0656]
gi|371544795|gb|EHN73470.1| reductase, partial [Streptomyces coelicoflavus ZG0656]
Length = 284
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 68/176 (38%), Gaps = 21/176 (11%)
Query: 35 QFLFISSAGIYK------PADEPPHVEGDVVKPDAGHVQV-------EKYISENFSNWAS 81
+++++SS +Y A++ P VEG DAG E +S+ F S
Sbjct: 28 RYVYVSSRSVYAWPPPAGCAEDAPLVEG--ASADAGQSDYARDKRGGELAVSDAFGADRS 85
Query: 82 F--RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
R ++G N W+ DR+ R PV PG VRDL+ AVE
Sbjct: 86 VLVRAGLILGPYENIGRLPWWLDRVARGGPVLAPGPRELPVQYIDVRDLADWTLGAVERE 145
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPF 192
N+ L T+ G+ CA G E+ DP AAGI+ P
Sbjct: 146 LGGPYNL-GLPRRGHTTMGGLLDACATVTGGTAELRWTDPGTVLAAGIEPWVQLPV 200
>gi|341613782|ref|ZP_08700651.1| bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose
epimerase; GDP-4-dehydro-6-L-deoxygalactose reductase
[Citromicrobium sp. JLT1363]
Length = 323
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 88/236 (37%), Gaps = 36/236 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N ++ V + A SGV + LF+ S+ IY K AD+P P EG A
Sbjct: 90 NLMIEANVMEAAHRSGVGKLLFLGSSCIYPKHADQPLREDALMTGPLDPIHEGYATAKIA 149
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNN-KDCEEWFFDRIVRK---------RPVPIP 113
G + Y ++ ++ S P + G G+N ++RK + I
Sbjct: 150 GLRLAQAYRKQHGRDFISAMPTNLYGPGDNFGPTTSHVLPALIRKAHEAKLAGDATMEIW 209
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
G+G HV DL+ + E + + N+ + + + +L G E
Sbjct: 210 GTGSARREFLHVDDLADACVFLMR--EYSDDRLINVGFGEDIAILDLVRLVNDMVGYTGE 267
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
I H K G K R + LGWR + L E + + +E +V+
Sbjct: 268 IAHDRTKPDGTPRKLMDSSR-----------LNALGWRPSIGLREGIAQTYEWFVQ 312
>gi|219852721|ref|YP_002467153.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris
E1-9c]
gi|219546980|gb|ACL17430.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris
E1-9c]
Length = 304
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 31/195 (15%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 87
A+ GVK+ +F SS+ +Y P E P + + V K E++ N F Y
Sbjct: 102 ARDQGVKKIMFASSSSVYGDTPTLPKRESMTPAPMSPYA-VTKLTGEHYFNV--FSSLY- 157
Query: 88 IGSGNNKDCEEWF--------------------FDRIVRKRPVPIPGSGMQFTNIAHVRD 127
G C +F +I+ I G G Q + +RD
Sbjct: 158 ---GLKMTCLRYFNVFGPRQDPKSQYAAVIPNFITKILNHESPIIHGDGEQTRDFTFIRD 214
Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI-DA 186
+ LA+ E++S IFN+ DR V+L+ +A + G E+++ P++ + D+
Sbjct: 215 VVHANILAM---ESSSEGIFNIACDRRVSLNVLADQIMEIIGERRELIYDAPRSGDVRDS 271
Query: 187 KKAFPFRNMHFYAEP 201
+ H EP
Sbjct: 272 LADYTLAKEHLNYEP 286
>gi|332157986|ref|YP_004423265.1| UDP-glucose 4-epimerase [Pyrococcus sp. NA2]
gi|331033449|gb|AEC51261.1| UDP-glucose 4-epimerase [Pyrococcus sp. NA2]
Length = 306
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F +R +R P+ I G G Q + V+D+ L V E A+ +FN+ + R +
Sbjct: 186 FMERAIRGEPLIIYGDGKQTRDFIFVKDVVDA-NLLVAKKERANGEVFNVATGRETMIID 244
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTT 214
+A + + P +I+ Y P+ I R+ DI LG++
Sbjct: 245 LALKVIELSSSPSQIIFYPPRPGDIK----------------RSVADIGKIRKLGFKPKY 288
Query: 215 NLPEDLKERF 224
+L E LKE F
Sbjct: 289 SLEEGLKETF 298
>gi|418400949|ref|ZP_12974484.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti CCNWSX0020]
gi|359505056|gb|EHK77583.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti CCNWSX0020]
Length = 368
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G Q + HVRD++ LA+E P AA ++ N+ S A + +A L A+A G+P
Sbjct: 243 GRQKRDFVHVRDVARAFRLALEQPHAA-GHVINIGSGNAYAIADIASLLAEAMGVP---- 297
Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+P+ ++ ++ RN +A+ A+D+LG+ L + L + F ++V+
Sbjct: 298 EIEPEI--MNKARSGDIRNC--FADIAKARDLLGFEPIHRLEDSLAD-FAQWVR 346
>gi|254294169|ref|YP_003060192.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814]
gi|254042700|gb|ACT59495.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814]
Length = 324
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 83
V ++A++SGV ++ SS+ IY + P E DV K +E ++ S+
Sbjct: 110 VLEYARNSGVANVVYASSSSIYGGNTKMPFAEDDVTDTPVSFYAATKKSNELMAH--SYA 167
Query: 84 PQYMI-----------GSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
Y I G D W F +++ R PV I +G + ++ D+ +
Sbjct: 168 HLYGISLTGLRFFTVYGEWGRPDMAYWIFSEKLRRNEPVQIFNNGDMSRDFTYIDDIVTG 227
Query: 132 LTLAVENPEAASS-----NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA 186
+ A++ P +A ++NL +D+ L + +A G + I + P G D
Sbjct: 228 VIAAIDRPASALGLDVPHRVYNLGNDKPEKLMDLVGCIEKAFGQEL-IKEFQPMQLG-DV 285
Query: 187 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
++ +A+ A+ LG+ T+L E + ERF + K
Sbjct: 286 ERT--------WADISRARKELGFNPHTSLEEGI-ERFASWFK 319
>gi|85816916|gb|EAQ38101.1| UDP-glucose 4-epimerase [Dokdonia donghaensis MED134]
Length = 330
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 26/224 (11%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY 71
F NN + + A + +K+F+F SS +Y E P E +P+ + +
Sbjct: 90 FNYENNLIGSINLINAAVNHNIKKFIFTSSIAVYG-TQELPLKESQKPQPEDPYGIAKYA 148
Query: 72 ISENFSN--------WASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQ 118
+ + N + FRP + G G N ++ F +++++ P+ I G G Q
Sbjct: 149 VEMDLDNAHKMFGLDYIIFRPHNVYGPGQNIGDKYRNVVGIFMNQMLKDEPLTIFGDGNQ 208
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
++ D++ + + + A + IFN+ +D T++ +AK V I H +
Sbjct: 209 TRAFTYINDVAPYIAASYAFAK-ADNQIFNIGADTENTVNDLAKEVGVVMKKEVTINHLE 267
Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
+ + H YA+ +I + T L + L+E
Sbjct: 268 QREEVV-----------HAYADHSKFIEIFSPKPATTLAQGLQE 300
>gi|357403452|ref|YP_004915376.1| UDP-glucose 4-epimerase [Methylomicrobium alcaliphilum 20Z]
gi|351716117|emb|CCE21768.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose
4-epimerase) CapN-like [Methylomicrobium alcaliphilum
20Z]
Length = 314
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 22/222 (9%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY---------ISE 74
+A A +GVK+F+FISS G+ ++E P E D P + V KY SE
Sbjct: 99 LARQAARAGVKRFVFISSIGVNGNSNEQPFTEMDRPSPVEAY-AVSKYEAECGLQAIASE 157
Query: 75 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
RP + G N D + P+P + + IA + +L + +
Sbjct: 158 TGMEVVIIRPPLVYGP-NAPGNFRRLMDFAAKSIPLPFGAVDNKRSLIA-LDNLVEFIVI 215
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-------LPVEIVHYDPKAAGIDAK 187
+++P AA + IF + V+ + K+ A+A G +PV +++ K G
Sbjct: 216 CIDHPNAA-NEIFLIADGEDVSTIDLLKMTARAFGRKLLLIPVPVSWLYFAAKLIGKPGV 274
Query: 188 KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
++ + AK +LGW + L++ E Y K
Sbjct: 275 ANSLLGSLR--VDSTKAKRLLGWSPVITMEAQLQKAAEAYFK 314
>gi|290968979|ref|ZP_06560514.1| NAD-binding protein [Megasphaera genomosp. type_1 str. 28L]
gi|290780935|gb|EFD93528.1| NAD-binding protein [Megasphaera genomosp. type_1 str. 28L]
Length = 309
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-- 81
+ + + V++F+F SSA +Y P E + P + + + K +E +
Sbjct: 100 ILELCRRHTVRKFIFSSSAAVYGDNTRVPLKETEATTPLSFY-GLTKCTAEAYIRMYHDI 158
Query: 82 FRPQYMI----------GSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSS 130
F+ Y+I GN + + F + + + + + + G G Q + +V+D++
Sbjct: 159 FQVPYVILRYANVYGERQGGNGEGGVVFVFSQALAQGKEITVFGDGEQTRDFVYVKDVAR 218
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
A++ + +N+ ++ T++ + ++ AG P VHY+P A+
Sbjct: 219 ANVCALQ--ANGTEGTYNIGTNIETTVNALKEMLVYIAGTPTH-VHYEP------ARSGD 269
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
+R++ A +A ++ LGW TT L L++ +
Sbjct: 270 IYRSV--LANTKAVQE-LGWEPTTKLLGGLQQTY 300
>gi|312143250|ref|YP_003994696.1| NAD-dependent epimerase/dehydratase [Halanaerobium
hydrogeniformans]
gi|311903901|gb|ADQ14342.1| NAD-dependent epimerase/dehydratase [Halanaerobium
hydrogeniformans]
Length = 329
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 33 VKQFLFISSAGIY-KPA-----DEP-----PHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+Q++FISSA Y KP DE P+ E K ++ + +Y F
Sbjct: 90 TEQYIFISSASAYQKPQSSYLIDESTPLANPYWEYSQNKIACENLLMAEYRRNGFPV-TI 148
Query: 82 FRPQYMIG-----SGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
RP + G + N W DR+ R++ + + G G + H D +
Sbjct: 149 VRPSHTYGYRSIPAALNSSKAPWSLIDRMRRRKKILVHGDGSSLWTMTHNTDFARAFLPL 208
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ N +A + F + SD ++ + + KL A+AAG+ +E++H
Sbjct: 209 MGNIQAIG-HAFQITSDESLNWNQIFKLIAKAAGVEIELLH 248
>gi|228989696|ref|ZP_04149678.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
pseudomycoides DSM 12442]
gi|228995896|ref|ZP_04155554.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus mycoides
Rock3-17]
gi|229003513|ref|ZP_04161331.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus mycoides
Rock1-4]
gi|228757751|gb|EEM06978.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus mycoides
Rock1-4]
gi|228763868|gb|EEM12757.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus mycoides
Rock3-17]
gi|228770030|gb|EEM18612.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
pseudomycoides DSM 12442]
Length = 306
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 5 YAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA- 63
+ K+K + N N + + + ++ SG+K+ + +S+ IY DE V + PD
Sbjct: 56 WGKYKDFY--NANVLGTKHIIEGSQKSGIKRLIHVSTPSIYFYYDERQDVVENAKLPDTF 113
Query: 64 -GHVQVEKYISENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPG 114
H KY++E + A + RP+ + G G+N ++ K +P G
Sbjct: 114 VNHYAKTKYLAEQSIDQAFNHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIG 171
Query: 115 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
+ +I ++ ++ L L + +P+ +N+ + V L
Sbjct: 172 TEDVLVDITYIDNVVDALLLCMHSPKHTLGQKYNITNGERVNL 214
>gi|218516332|ref|ZP_03513172.1| probable UDP-glucose 4-epimerase protein [Rhizobium etli 8C-3]
gi|417099845|ref|ZP_11959918.1| putative UDP-glucose 4-epimerase protein [Rhizobium etli CNPAF512]
gi|327192481|gb|EGE59435.1| putative UDP-glucose 4-epimerase protein [Rhizobium etli CNPAF512]
Length = 367
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R+ +P I G Q + HVRD++ LA+E P AAS ++ N+ S +A ++
Sbjct: 226 FGSRLANGQPPMIFEDGKQRRDFVHVRDVARAFRLALEKP-AASGHVINIGSGQAYSIAD 284
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A L A A G+P KA D + F A+ A+++LG+ +L
Sbjct: 285 VATLLADAMGVPEIAPDIMNKARSGDIRNCF--------ADISKARELLGFEPRYHLENS 336
Query: 220 L 220
L
Sbjct: 337 L 337
>gi|357038225|ref|ZP_09100023.1| UDP-glucose 4-epimerase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359800|gb|EHG07560.1| UDP-glucose 4-epimerase [Desulfotomaculum gibsoniae DSM 7213]
Length = 318
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 39/228 (17%)
Query: 28 AKSSGVKQFLFISSAGIYK-----PADE----PPHVEGDVVKPDAGHVQVE-------KY 71
++ VK+ ++ SSA +Y P DE P V K H V KY
Sbjct: 104 CRTCEVKKIVYASSAAVYGNPRYLPVDEEHPVQPLSGYGVSKHTVEHYLVAYQALYGLKY 163
Query: 72 ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
I+ ++N R Q G G F DR++R R I G G Q + V D++
Sbjct: 164 IALRYANVYGPR-QDATGEGG---VVAIFTDRLLRGRRCRIFGDGRQTRDFIFVGDVARA 219
Query: 132 LTLAVENPEAASS---------NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
A++ AA S IFN+ + +++ + Q G +E + P+A
Sbjct: 220 NLAAIDIDSAAGSGTARRSGGCGIFNISTGIPTSVNELYDTLRQITGSDLEPEYCPPRAG 279
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
I+ H Y + +AA L W++ +L + L++ + Y +I
Sbjct: 280 DIE----------HSYLDEKAAVTGLRWQAKRSLVDGLRDTVDYYRQI 317
>gi|295112136|emb|CBL28886.1| Nucleoside-diphosphate-sugar epimerases [Synergistetes bacterium
SGP1]
Length = 312
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 99/246 (40%), Gaps = 48/246 (19%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKP 61
+ N ++ V + +GVK+ LF+ S+ IY +P E + G + +
Sbjct: 82 SENLMMETNVIRESWRTGVKKLLFLGSSCIYPKFAPQPIPEDALLSGPLEPTNDCYALAK 141
Query: 62 DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVP 111
AG + Y + +N+ S P + G G+N E ++RK V
Sbjct: 142 IAGIRMCQAYNQQYGTNFISVMPTNLYGPGDNFGLENSHVLPAMIRKVHEAKAKGAESVT 201
Query: 112 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA-KLCAQAAGL 170
+ G+G HV DL+ +E + S I N+ + +T+ +A K+CA
Sbjct: 202 LWGTGTPRREFLHVDDLADACLFLMERHDG--SRIVNVGTGEDLTICELAEKVCA----- 254
Query: 171 PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFE 225
+V Y + +++ PR DI +GWR T +L E ++ ++
Sbjct: 255 ---VVGYAGRVLWDESRPD---------GTPRKLLDITFLRGMGWRHTIDLDEGIRRTYQ 302
Query: 226 EYVKIG 231
++K G
Sbjct: 303 AFLKGG 308
>gi|218884406|ref|YP_002428788.1| UDP-glucose 4-epimerase (galE-2) [Desulfurococcus kamchatkensis
1221n]
gi|218766022|gb|ACL11421.1| UDP-glucose 4-epimerase (galE-2) [Desulfurococcus kamchatkensis
1221n]
Length = 307
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 15/137 (10%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS 73
T N + + + + + G+K+F+F+SSA +Y P P E D KP + V KY
Sbjct: 87 TKVNIEATQNLIELSITHGIKRFVFMSSASVYHPDTPEPVREEDAGKP-VSYYGVTKYAG 145
Query: 74 ENFSNW---------ASFRPQYMIGSGN----NKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
E +W + RP + G G + + +R + V + +
Sbjct: 146 ELIGSWYYRKGLIDFRALRPTVVFGPGRFRGPSAEYSSMIIERALNNEKVIVKNPNDK-V 204
Query: 121 NIAHVRDLSSMLTLAVE 137
N +VRD+ S+L L E
Sbjct: 205 NYIYVRDVVSVLILLAE 221
>gi|320107081|ref|YP_004182671.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4]
gi|319925602|gb|ADV82677.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4]
Length = 326
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 90/229 (39%), Gaps = 39/229 (17%)
Query: 1 MEFNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK 60
M FN LF+ N F F++IS+ +Y+ P E D ++
Sbjct: 99 MHFNVESTMRLFQMNCRFDHH------------SHFIYISTGLVYREQGRPLR-ETDPIE 145
Query: 61 P--------DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV----RKR 108
AG ++ +E RP G D E F RI+ +
Sbjct: 146 TLHPYGASKAAGDSMLQAAAAEFKRRLTILRPFAFTG---KHDGGERLFPRILTAAAEGK 202
Query: 109 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK-LCAQA 167
+P+ G Q + V D++ + + E EA FNL S +++ L + + +C Q
Sbjct: 203 VLPMT-QGDQIRDFCSVDDIARAVMMVTEREEAPLIEKFNLGSGKSLPLKDLVRDVCIQ- 260
Query: 168 AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL 216
L ++ V +D + A K P+ MH A+ AK+ILGW +L
Sbjct: 261 --LNLD-VKFD-----LGAVKMHPYEPMHSVADISHAKEILGWEPQVSL 301
>gi|158335848|ref|YP_001517022.1| NAD-dependent epimerase/dehydratase [Acaryochloris marina
MBIC11017]
gi|158306089|gb|ABW27706.1| NAD-dependent epimerase/dehydratase, putative [Acaryochloris marina
MBIC11017]
Length = 344
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 34 KQFLFISSAGIYKPADEPPHVE------GDVVKPDA--GHVQVEKYISENFSNWASFRPQ 85
K+F+ IS+ G++ + PP E GD+ + G + ++++ +E RP
Sbjct: 121 KRFVHISTIGVHGHIENPPADETYRTSPGDLYQSTKLEGEIWIKQFGAETGLPITIIRPA 180
Query: 86 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 145
+IG G + + + ++V VP G+G ++ HV DL++ LA ++P A +
Sbjct: 181 GIIGPGEKRLLKIY---KMVCSGLVPAIGNGGNLLHLIHVDDLTNCFLLASQHPNAVNE- 236
Query: 146 IFNLVSDRAVTLDGMAKLCAQ 166
IF + +++ M L ++
Sbjct: 237 IFICGNQDSISFKEMVNLISK 257
>gi|417936456|ref|ZP_12579770.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus infantis X]
gi|343400891|gb|EGV13400.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus infantis X]
Length = 326
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 93/220 (42%), Gaps = 29/220 (13%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA 80
+ V + + +G+++ ++SS IY P D+ E D + + + YI ++
Sbjct: 94 KTVLEACRQAGIQRLAYVSSPSIYAAPKDQLAIKESDAPEEN----NLNNYIRSKLASEK 149
Query: 81 SF-----------RPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVR 126
F RP+ + G G+ R++ +K +P+ G G Q ++ V
Sbjct: 150 LFKDYPDVPSIILRPRGLFGIGDTS-----ILPRVINLSQKIGIPLIGDGRQLMDMTCVE 204
Query: 127 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGID 185
+++ + LA+E PE A +I+N+ + + + G P++ +GI
Sbjct: 205 NVALAIRLALEAPE-AKGDIYNITNGEPRAFRDLLEESLTGLGYPIKYRKISASLLSGIA 263
Query: 186 AKKAFPFRNMHFYAEP---RAAKDILGWRSTTNLPEDLKE 222
+ F ++ ++ EP R +L + T ++ + KE
Sbjct: 264 SSLEFLYKTLNLKGEPALTRYTYYLLRYSQTLDISKAEKE 303
>gi|417933381|ref|ZP_12576706.1| UDP-glucose 4-epimerase [Propionibacterium acnes SK182B-JCVI]
gi|340771944|gb|EGR94458.1| UDP-glucose 4-epimerase [Propionibacterium acnes SK182B-JCVI]
Length = 329
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 42/222 (18%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHVEGDVVKP----------------DAGHVQVEKYISE 74
+GV + LF SSA IY +E E + P DA H K +S
Sbjct: 106 NGVHRILFSSSASIYATDEEFKVTEESALDPGSPYATTKFMVELILRDAAHASDLKALSL 165
Query: 75 NFSNWASFRPQYMIGSGN-------NKDCEEWFFDRIVRKRPVPIP---GSGMQFTNIAH 124
+ N P+ G K + W D V P GSG++ + H
Sbjct: 166 RYFNPIGSDPKLRTGQQIEHPTHVLGKMIDAWMEDSTFTVTGVEWPTRDGSGIR--DYIH 223
Query: 125 VRDLSSMLTLAVENPEAASSN----IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
V DL+ A+E+ + +++ +FN+ + VT+ + K + G + +V+ P+
Sbjct: 224 VWDLARAHVAALEHLDEVTTDDPYQVFNIGTGSGVTVKELVKAFEEGTGRSLNVVYGPPR 283
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
+ Y R AKD+LGW + + +++
Sbjct: 284 PGDVAGA----------YTVSRRAKDLLGWSAELTQADGIRD 315
>gi|334342154|ref|YP_004547134.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum ruminis DSM
2154]
gi|334093508|gb|AEG61848.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum ruminis DSM
2154]
Length = 308
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 25/216 (11%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV----QVEKYIS---ENFS-NW 79
++ GV + +F SSA +Y P E V P +G+ VEKY+ E + W
Sbjct: 105 CRTHGVAKVIFASSAAVYGNPAYLPVDEQHPVGPLSGYGVSKHAVEKYLEVYRELYGLKW 164
Query: 80 ASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
+ R + G + E F +++++ + I G G Q + +V+D+++ A
Sbjct: 165 TALRYANVYGPRQDALGEGGVVAIFINKLLQNQCPVIFGDGEQTRDFVYVKDVAAANVRA 224
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 195
+ + +FN+ + +A T++ + L QA G + + P++ I +
Sbjct: 225 LT---FGDNRLFNISTGKASTVNELLLLLQQAIGSSLLGEYGPPRSGDI----------L 271
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG 231
H Y + + A L W L + +KE E Y+K G
Sbjct: 272 HSYLDQQRAAVELDWVPRYALDQGIKETVEFYLKGG 307
>gi|451332651|ref|ZP_21903240.1| UDP-glucose 4-epimerase [Amycolatopsis azurea DSM 43854]
gi|449424798|gb|EMD30083.1| UDP-glucose 4-epimerase [Amycolatopsis azurea DSM 43854]
Length = 310
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 28/209 (13%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNW 79
A GV++ +F S+A +Y P E D +KP AG + Y +W
Sbjct: 109 AADEGVERVVFASTASVYGDPKRLPMHEDDELKPLTPYCISKRAGEDMLGFYERTKGLSW 168
Query: 80 ASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ R + G G + F R+ +P I G G Q + HV DL+ +
Sbjct: 169 NALRFFNVYGPGQKIEAYYTSVINHFIQRLRAGQPPIIDGRGDQSMDFVHVTDLARAVVA 228
Query: 135 AVENPEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
A+E+ +A N+ N+ + ++ +AK+ A G+ VE + ++ + + + A R
Sbjct: 229 ALESEQA---NLPINIGTGIDTSIATLAKILIDAVGVNVEPL-FNERDVLVSRRAADITR 284
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
A+++LGW ++ E + E
Sbjct: 285 ----------AREVLGWEPKISVEEGMYE 303
>gi|373458178|ref|ZP_09549945.1| NAD-dependent epimerase/dehydratase [Caldithrix abyssi DSM 13497]
gi|371719842|gb|EHO41613.1| NAD-dependent epimerase/dehydratase [Caldithrix abyssi DSM 13497]
Length = 316
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD------AGHVQVEKYISENFSNWA- 80
AK +GVK+ ++ +S+ Y P VE +KP+ + E+Y S + +
Sbjct: 107 AKENGVKRVVYAASSSAYGDTPTLPKVE--TMKPNPLSPYAVNKLAAEQYCSVFYKVYGL 164
Query: 81 -SFRPQYMIGSGNNKDCEEWFFDRIVR--------KRPVPIPGSGMQFTNIAHVRDLSSM 131
+ +Y G +D ++ I + + PV I G G Q + ++ ++
Sbjct: 165 ETVALRYFNIFGPRQDPNSYYSAVIPKFIKAFFKGESPV-IYGDGSQSRDFTYIENVIDA 223
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 191
A + P+A ++FN+ +TL+ +A+ + G V+ VH DP+ I
Sbjct: 224 NLKACKAPDA-PGHVFNIACGERITLNELAEELRKIIGSDVQPVHGDPRPGDIK------ 276
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
H A+ AA+ +LG++ + E LK E
Sbjct: 277 ----HSLADISAAQKLLGYQVKVRVHEGLKRTVE 306
>gi|86359933|ref|YP_471823.1| NDP-glucose dehydratase epimerase [Rhizobium etli CFN 42]
gi|86284035|gb|ABC93096.1| probable NDP-glucose dehydratase epimerase protein [Rhizobium etli
CFN 42]
Length = 367
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R+ +P I G Q + HVRD+++ LA+E P AA+ ++ N+ S +A ++
Sbjct: 226 FGSRLANGQPPMIFEDGKQRRDFVHVRDVATAFRLALEKP-AAAGHVINIGSGQAYSIAD 284
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGID-AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 218
+A L A A G+P EI G D KKA + +A+ A+++LG+ L
Sbjct: 285 VATLLADAMGVP-EI--------GPDIMKKARSGDIRNCFADISKARELLGFEPKYRLEN 335
Query: 219 DLKERFEEYVK 229
L F E+V+
Sbjct: 336 ALAP-FVEWVR 345
>gi|374327466|ref|YP_005085666.1| NAD-dependent epimerase/dehydratase [Pyrobaculum sp. 1860]
gi|356642735|gb|AET33414.1| NAD-dependent epimerase/dehydratase [Pyrobaculum sp. 1860]
Length = 285
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 34/183 (18%)
Query: 29 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP------------DAGHVQVEKY----I 72
+ GVK+ +F SS+ +Y E P EG +++P + H Y +
Sbjct: 78 RRRGVKELVFASSSSVYGEPVEIPVSEGALIRPVSVYGASKAACENLIHAYTRLYGIKAV 137
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP--VPIPGSGMQFTNIAHVRDLSS 130
+ ++N RP+ G W F +R P + + G G Q + ++ D
Sbjct: 138 ALRYAN--VVRPRLRHGV-------VWDFMNKLRANPRELEVLGDGTQVRSYIYIDDAVE 188
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGI----D 185
LA + + A S IFN+ S+ +T+D +AK+ + GL V+I+H P A G+ D
Sbjct: 189 ATILAWKKTDDAFS-IFNVASEDWITVDEVAKIVIEIMGLKDVKIIH-KPVAHGVGWLGD 246
Query: 186 AKK 188
KK
Sbjct: 247 VKK 249
>gi|261409114|ref|YP_003245355.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10]
gi|261285577|gb|ACX67548.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10]
Length = 319
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 91/242 (37%), Gaps = 46/242 (19%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N +Q + D + GVK+ LF+ S IY K A +P P E V
Sbjct: 83 DNLLIQNNIIDLSYRYGVKKLLFLGSTCIYPKLAPQPMKEEYLMTGALEPTNEPYAVAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG + Y + + + S P + G +N D E ++RK R V I
Sbjct: 143 AGITMCQSYNRQYGTRFISAMPTNLYGPNDNYDLETSHVLPALLRKIHEAKETGQREVEI 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G + DL+ +++ E + I N+ V++ +A+ A G
Sbjct: 203 WGTGQPKREFLYADDLADACLFLMKHYE--ENTIVNIGCGEDVSIRELAESIASTVGYDG 260
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
V+ K G PR D+ LGW+ + +L + L +E Y
Sbjct: 261 SFVYNASKPDGT----------------PRKLVDVSKLTALGWKPSISLEQGLARTYEHY 304
Query: 228 VK 229
++
Sbjct: 305 LE 306
>gi|424920606|ref|ZP_18343969.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392849621|gb|EJB02143.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 367
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R+ +P I G Q + HVRD+++ LA+E P AA+ ++ N+ S +A ++
Sbjct: 226 FASRLANGQPPMIFEDGRQRRDFVHVRDVATAFRLALEKP-AAAGHVINIGSGQAYSIAD 284
Query: 160 MAKLCAQAAGLP 171
+A L A A G+P
Sbjct: 285 VATLLADAMGVP 296
>gi|375096232|ref|ZP_09742497.1| nucleoside-diphosphate-sugar epimerase [Saccharomonospora marina
XMU15]
gi|374656965|gb|EHR51798.1| nucleoside-diphosphate-sugar epimerase [Saccharomonospora marina
XMU15]
Length = 288
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 65 HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIA 123
++ E+ + + +W RP + G +++ ++R+ PV P+PG G +
Sbjct: 116 RLEAEEAVRASALDWTIIRPTMIYGGPGDRNIARLLS--VLRRTPVLPVPGGGKRLLQPV 173
Query: 124 HVRDLSSMLTLAVENPEA 141
HV DL++ + AVE+P A
Sbjct: 174 HVEDLAAAVLNAVESPAA 191
>gi|89069787|ref|ZP_01157122.1| putative sulfolipid biosynthesis protein [Oceanicola granulosus
HTCC2516]
gi|89044588|gb|EAR50704.1| putative sulfolipid biosynthesis protein [Oceanicola granulosus
HTCC2516]
Length = 283
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQV--EKYISENFSNWASFR 83
A+ +GV+ +F+SS +Y P P E +PD G V++ E+ ++ + AS R
Sbjct: 96 ARKAGVEAAVFLSSRAVYGPV-AGPLTETAECRPDTLYGEVKLAGEQALAASGLRGASLR 154
Query: 84 PQYMIGSGNNKDCEEW--FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
+ G+ +W F R + P G + H RDL++ + LA+E P A
Sbjct: 155 ATGVYGAPGPGLAHKWEDLFAAFARGEEI-APRIGTEV----HGRDLAAAVRLALERPGA 209
Query: 142 ASS-NIFNLVSDRAVTLDGMAKLCAQAAGLP 171
A N+ +L+ DRA L A++ A +P
Sbjct: 210 AEVLNVSDLLLDRAELLALWAEVSGVAGRVP 240
>gi|190894633|ref|YP_001984926.1| putative UDP-glucose 4-epimerase [Rhizobium etli CIAT 652]
gi|190700294|gb|ACE94376.1| probable UDP-glucose 4-epimerase protein [Rhizobium etli CIAT 652]
Length = 367
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R+ +P I G Q + HVRD++ LA+E P AAS ++ N+ S +A ++
Sbjct: 226 FGSRLANGQPPMIFEDGKQRRDFVHVRDVARAFRLALEKP-AASGHVINIGSGQAYSIAD 284
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A L A A G+P KA D + F A+ A+++LG+ +L
Sbjct: 285 VATLLADAMGVPEIAPDIMNKARSGDIRNCF--------ADISKARELLGFEPRYHLENS 336
Query: 220 L 220
L
Sbjct: 337 L 337
>gi|409398039|ref|ZP_11248891.1| epimerase [Pseudomonas sp. Chol1]
gi|409117545|gb|EKM93973.1| epimerase [Pseudomonas sp. Chol1]
Length = 309
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 19/194 (9%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 83
V + ++ GV++ LF SSA +Y E ++ D K +K SE++ ++ +R
Sbjct: 103 VCEAMRAEGVRRVLFASSAAVYGNNGEGEAIDEDTPKAPLTPYAADKLASEHYLDF--YR 160
Query: 84 PQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 127
Q+ + G +D F +R + P+ + G G Q + +V D
Sbjct: 161 RQHGLEPVVFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIVVFGDGEQTRDFVYVGD 220
Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 187
L +L A+E+ EA + N+ RA +L+ + + + G + + P+ I
Sbjct: 221 LVEVLVQALESSEAVEGAV-NVGLSRATSLNQLLEAIGEVLGGLPAVTYQAPRPGDIRHS 279
Query: 188 KAFPFRNMHFYAEP 201
+A R + Y P
Sbjct: 280 RANNTRLLQRYRLP 293
>gi|452207826|ref|YP_007487948.1| NAD-dependent epimerase/dehydratase [Natronomonas moolapensis
8.8.11]
gi|452083926|emb|CCQ37254.1| NAD-dependent epimerase/dehydratase [Natronomonas moolapensis
8.8.11]
Length = 331
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 85/218 (38%), Gaps = 30/218 (13%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS--------------- 77
V ++++SS Y AD P EG+ + E++
Sbjct: 93 VDAYVYVSSGSAYG-ADRVPKREGETPLCPCSVAEATDDTDESYGPRKAEGDRAVFSAAD 151
Query: 78 ---NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
N S RP + G + + +++ DR+ + +PG+G +A+V D++ L +
Sbjct: 152 RGVNAMSVRPPVVYGPHDYTERFDYWIDRVDTHDRIVVPGNGSSLWQLAYVEDVARALRI 211
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG---LPVEIVHYDPKAAGIDAKKAFP 191
E +S +N+ D A L +L A+A PV + A G+ A AFP
Sbjct: 212 VAER--GSSGEAYNVGEDHAPILREWVELVAEACATDVTPVFASERELGAVGLSA-DAFP 268
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPED--LKERFEEY 227
+ + LGW ST P D L+E E+
Sbjct: 269 LYRGYPHLLDTTKLRELGWEST---PHDRALRETVTEH 303
>gi|414155138|ref|ZP_11411453.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411453188|emb|CCO09357.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 278
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVR----KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
RP + G E F +++R KRP + +G Q+ + +V D+ L A
Sbjct: 135 LRPTLVYGPAQG---EHLFLSQLMRSLLYKRPFAMT-AGQQYRDFVYVADVVEALWRAAN 190
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 197
P AA +FN+ S ++V+L +A+ G +++ Y K + + A+
Sbjct: 191 TPRAA-GGVFNIGSGQSVSLRDVAETVGALTG-GTDLLRYGAKPYAAEEQFAYC------ 242
Query: 198 YAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
+ + A+ IL W+ T+L + L + Y +I
Sbjct: 243 -VDIKLARQILQWQPATSLEQGLTTTLQWYRQI 274
>gi|260061269|ref|YP_003194349.1| GDP-fucose synthetase [Robiginitalea biformata HTCC2501]
gi|88785401|gb|EAR16570.1| GDP-fucose synthetase [Robiginitalea biformata HTCC2501]
Length = 320
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 36/236 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPDA 63
N +Q + + SGV F+F+ S+ IY +P E + G + + A
Sbjct: 87 NLSIQNNLIQASHESGVTGFIFLGSSCIYPKLAPQPLGEDSLLTGPLEPTNQWYAIAKIA 146
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G E + + S P + G +N D + ++RK + V +
Sbjct: 147 GVKLCESIRRQYGKYYISLMPTNLYGPNDNFDLKTSHVLPAMIRKFHEAKLADHKSVDLW 206
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
GSG HV DL+ + A+EN +++N+ + R +T+ +AKL + G
Sbjct: 207 GSGKPMREFLHVDDLADAVVYAMEN--KLPHDLYNVGTGRDLTIRSLAKLIQEIVGHKGA 264
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
I H+D +D P + M + GW ++ L + ++ ++ ++K
Sbjct: 265 I-HWD-----MDKPDGTPRKLMDVSRLKES-----GWTASIGLEDGIRSTYDWFLK 309
>gi|427707127|ref|YP_007049504.1| UDP-glucose 4-epimerase [Nostoc sp. PCC 7107]
gi|427359632|gb|AFY42354.1| UDP-glucose 4-epimerase [Nostoc sp. PCC 7107]
Length = 322
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 22/170 (12%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEK----YISENFSNW 79
A VK+ +F SSA +Y P E P A + E+ Y + +
Sbjct: 109 AHHCRVKRVIFASSAAVYGNDPTLPKRESMPTHPISPYGADKLASEQLGQIYHQQGLVEF 168
Query: 80 ASFRPQYMIGSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
S R + G N D F DRI + P I G+G+Q + HV D+ +A+
Sbjct: 169 VSLRYFNVFGLRQNSDYTGVISQFCDRIRQSVPPIIYGNGLQSRDFIHVSDVVQANLIAM 228
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA----------GLPVEIVH 176
++P+AA IFN+ +A +L + L Q GLP +I H
Sbjct: 229 KHPQAAGK-IFNIGCGQATSLLELIALLNQITKQNLRPIFRPGLPGDIHH 277
>gi|406872440|gb|EKD22958.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 341
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 14/178 (7%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEP-PHVEGDVVKPDAGHVQVEK 70
N N + +A AK GV +F+F SS +Y A+ P E DVV P + + +
Sbjct: 86 LTVNINAQATINLAKVAKKCGVNKFIFASSCSVYGKAETTKPVTEMDVVGPLTSYAKAKL 145
Query: 71 YISENFSNWAS--FRPQYMIGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFT 120
AS F P M + D +V + V I G +
Sbjct: 146 LAENGLMELASNNFHPVMMRNATVYGSSPTIRLDLVVNNLIAGALINKKVTILSDGTPWR 205
Query: 121 NIAHVRDLSSMLTLAVENPEAASSN-IFNL--VSDRAVTLDGMAKLCAQAAGLPVEIV 175
+ H+RDL+ + + +PE N IFN+ + + K+CAQ +EI+
Sbjct: 206 PLVHIRDLAQAIETIICSPEELVHNQIFNVGRIDGNYQVKEIGEKVCAQIKNSRLEIL 263
>gi|378763943|ref|YP_005192559.1| putative nucleoside-diphosphate-sugar epimerase [Sinorhizobium
fredii HH103]
gi|365183571|emb|CCF00420.1| putative nucleoside-diphosphate-sugar epimerase [Sinorhizobium
fredii HH103]
Length = 320
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 68/169 (40%), Gaps = 16/169 (9%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY 71
F N N LQ VA A S V+QF+ S +Y PA P + +
Sbjct: 89 FELNTNGALQ--VAMDAASQDVQQFVHFGSGQVYTPAPAPALETSPAFPVNRASYYLASK 146
Query: 72 ISENFSNWA----------SFRPQYMIGSG-NNKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
+S A RP + G G + K F + +PV I G
Sbjct: 147 LSAEICLLAFGKEKGMPVTVLRPASVYGPGMHGKGMVTAFIRALACGQPVIICDGGAYRV 206
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 169
++ +V D++S LA+E A S +FN+ S +A T A++ A+A G
Sbjct: 207 DLVYVDDVAS---LALEAVAAESEGVFNVGSGQACTSLEAARIIAEAIG 252
>gi|320168804|gb|EFW45703.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 297
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
RP ++ G G E WF V IP + Q++ I H DL+ VENP+
Sbjct: 155 LRPGFVFGKGA-AHFERWFAQFHKNVPEVVIPAAERQYSYI-HADDLAEAYQRVVENPKI 212
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
AS +++ + D +T A++ A+AAG ++V D
Sbjct: 213 ASGSVYTIGDDSRITHIEFARVFAKAAGYQGKLVASD 249
>gi|21226760|ref|NP_632682.1| GDP-fucose synthetase [Methanosarcina mazei Go1]
gi|20905052|gb|AAM30354.1| GDP-fucose synthetase [Methanosarcina mazei Go1]
Length = 312
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 92/240 (38%), Gaps = 45/240 (18%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPDA 63
N ++ + + GVK+ LF+ S+ IY +P E + G + V A
Sbjct: 84 NLMIEANIIHASYKCGVKKLLFLGSSCIYPKLAPQPLKEEYLLTGPLEETNEAYAVAKIA 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPIP 113
G + Y + +N+ S P + G +N D E F + V P V I
Sbjct: 144 GIRLCKHYNQQYGTNFISVMPTNLYGPNDNFDLETSHVMPALVRKFHEAKVNNEPEVVIW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF-NLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G + HV D++ +EN F N+ + +T+ +A+L + G
Sbjct: 204 GTGKPYREFLHVDDMADACVYLMENFNTDDIGEFVNIGVGKDITIGELAELIKEIVGFKG 263
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
EI K G P+ DI LGW++ +L + +++ +E Y
Sbjct: 264 EIRKDLSKPDGT----------------PQKLLDITKLSSLGWKANISLKDGIRQTYEWY 307
>gi|414174812|ref|ZP_11429216.1| hypothetical protein HMPREF9695_02862 [Afipia broomeae ATCC 49717]
gi|410888641|gb|EKS36444.1| hypothetical protein HMPREF9695_02862 [Afipia broomeae ATCC 49717]
Length = 314
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 46/241 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEG---DVVKPD---------A 63
N + V A GV++ LF+ S+ IY K A +P + D ++P A
Sbjct: 89 NLLIATNVIHAAHVQGVEKLLFLGSSCIYPKLAPQPLREDSLLTDTLEPTNEPYAIAKIA 148
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR----------PVPIP 113
G E Y S+ S++ S P + G G+N E + +R V +
Sbjct: 149 GVKMAEAYRSQYGSDFISIMPTNLYGPGDNYHPEYSHVVAALIRRFHEAKETGAAEVVVW 208
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
G+G +V D++ ++N + S + N+ S +++ A + A+ G +
Sbjct: 209 GTGTPRREFLYVDDMADASIHLMKN--YSESGLINVGSGEDISIADFAHVVARTVGYTGK 266
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEYV 228
IV K G PR D+ GWR+TT+L E +K + ++
Sbjct: 267 IVFDTSKPDGT----------------PRKLLDVSKLANFGWRATTSLDEGMKRAYAAFL 310
Query: 229 K 229
K
Sbjct: 311 K 311
>gi|306825999|ref|ZP_07459335.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304431715|gb|EFM34695.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 326
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 100/238 (42%), Gaps = 40/238 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V + + +G+++ +++SS IY P D+ E + + + ++ YI ++ F
Sbjct: 96 VLEACQETGIQRLVYVSSPSIYAAPRDQLAIKESEAPQEN----KLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ ++ +K +P+ G G Q ++ V +++
Sbjct: 152 EDYPDVPSIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAF 190
+ LA+E P+ AS ++N+ + + + + G P+ P + I + F
Sbjct: 210 IRLALEAPQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLLSVIASSLEF 268
Query: 191 PFRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 229
+R + EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 269 LYRVLKLKGEPALTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|409422462|ref|ZP_11259559.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. HYS]
Length = 309
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 22/185 (11%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN 75
+NF V + + +G+K+ LF SSA +Y E ++ D VK V+K SE
Sbjct: 96 SNFIGTLNVCEAMRLNGIKRVLFASSAAVYGNNGEGQSIDEDTVKAPLTPYAVDKLASEQ 155
Query: 76 FSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQF 119
+ ++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 156 YLDF--YRRQHGLEPVVFRFFNIFGPRQDPSSPYSGVISIFCERALNGTPITLFGDGEQT 213
Query: 120 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG-MAKLCAQAAGLPVEIVHYD 178
+ +V DL S++ A+E A + N+ ++A +L+ +A L + LP + Y
Sbjct: 214 RDFLYVGDLVSVMVQALEMAAVAEGAV-NIGLNQATSLNQLLAALKSVVGDLPA--ISYG 270
Query: 179 PKAAG 183
P +G
Sbjct: 271 PARSG 275
>gi|425459754|ref|ZP_18839240.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9808]
gi|389827723|emb|CCI20857.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9808]
Length = 326
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYI----SENFSNWA 80
+GVK F+F+SS I+ A E ++ E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDNILNENSPCHPDSPYGRSKLQAEQALIQLAKDSDMTWT 164
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENP 139
RP + G GN + E +++ KR +P+P G+ + V +L + + +++P
Sbjct: 165 IIRPTLVYGLGNRANMERLM--KLI-KRGLPLPFGAIKNCRSFVFVGNLVAAIITCLDHP 221
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
AA + IF + ++AV+ + +L AQ P +++
Sbjct: 222 NAA-NQIFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|374985940|ref|YP_004961435.1| putative reductase [Streptomyces bingchenggensis BCW-1]
gi|297156592|gb|ADI06304.1| putative reductase [Streptomyces bingchenggensis BCW-1]
Length = 334
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 24/176 (13%)
Query: 35 QFLFISSAGIYK---PA---DEPPHVEGDVVKPDAGHVQ-VEKYISENFSNWASF----- 82
Q+++ISS +Y PA ++ P VEG PDAG V+ + + A+F
Sbjct: 92 QYVYISSRSVYAYPAPAGLDEDGPLVEG---SPDAGEVEYAQAKRGGELAAQAAFGERAL 148
Query: 83 --RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
R ++G N W+ RI + PV PG VRDL+ + A E
Sbjct: 149 LARAGLILGPYENVGRLPWWLTRISQGGPVLAPGPRELALQYIDVRDLAGWVLDAAER-- 206
Query: 141 AASSNIFNLVSDRA-VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPF 192
+NLVS T + + CA G E+ DP+ AAG++ P
Sbjct: 207 -GLGGPYNLVSPPGQATFGELLEACAAVTGSDAELRWTDPEAVLAAGVEPWTELPV 261
>gi|448361018|ref|ZP_21549643.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
gi|445652391|gb|ELZ05287.1| NAD-dependent epimerase/dehydratase [Natrialba asiatica DSM 12278]
Length = 347
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEG---DVVKP-DAGHVQVEKYISENFSNWAS-- 81
A GV++ +ISS +Y D P E + V P +Q EK + E+F
Sbjct: 95 AHEGGVERVCYISSTAVYGTHDTHPITEESPLEGVGPYGEAKIQAEK-VCEDFRRMGLCV 153
Query: 82 --FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
RP+ IG + FD I VP+ G G + HV DL + + L + +
Sbjct: 154 PILRPKTFIGP-QRLGVFQVLFDWIEDGANVPLVGWGTNQYQLLHVHDLLTAIDLLLTDD 212
Query: 140 EAASSNIFNLVSDRAVTL 157
+ A ++ FN+ +D T+
Sbjct: 213 KEAVNSTFNVGTDEFTTM 230
>gi|392402383|ref|YP_006438995.1| NmrA family protein [Turneriella parva DSM 21527]
gi|390610337|gb|AFM11489.1| NmrA family protein [Turneriella parva DSM 21527]
Length = 288
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+P+ K++GVK +F+S G+ K P H ++EK I E+
Sbjct: 88 KPLIRECKAAGVKHIVFLSVQGVEKSRIIPHH-------------KIEKLIVESQIAHTF 134
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
RP Y + ++ D IV+KR V +P +FT I V D+ + + N A
Sbjct: 135 LRPAYFM-----QNFTTTLRDDIVKKRRVYLPAGDAKFTLI-DVADIGRVAAAILANSTA 188
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQ 166
+ ++L +D + M + ++
Sbjct: 189 HINKAYDLTNDEKLNFREMTDILSR 213
>gi|398838659|ref|ZP_10595933.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM102]
gi|398115530|gb|EJM05312.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM102]
Length = 309
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 18/184 (9%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ LF SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIGSLNVCEAMRQTGVKRVLFASSAAVYGNNGEGESIDEDTPKAPLTPYAADKLASE 154
Query: 75 NFSNW---------ASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
++ ++ FR + G S F +R + P+ + G G Q
Sbjct: 155 HYFDFYRRQHDLEPVVFRFFNIFGPRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQTR 214
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM-AKLCAQAAGLPVEIVHYDP 179
+ +V DL +L A+E P+ + N+ ++A TL M A L A LP V Y P
Sbjct: 215 DFVYVEDLVDVLVQAIEKPQVEVGAV-NVGWNQATTLKQMLAALEAVVGKLPP--VSYGP 271
Query: 180 KAAG 183
+G
Sbjct: 272 ARSG 275
>gi|123968933|ref|YP_001009791.1| fucose synthetase [Prochlorococcus marinus str. AS9601]
gi|123199043|gb|ABM70684.1| Putative fucose synthetase [Prochlorococcus marinus str. AS9601]
Length = 322
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 36/237 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N ++Q V + + + +K+FLF+ S+ IY K A++P P + + A
Sbjct: 88 NLKIQTNVIEASWENNIKRFLFLGSSCIYPKYANQPINEEELLNGYLEPTNQWYAIAKIA 147
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVRKRPVPIP 113
G E + + S P + G G+N D +++ +I V
Sbjct: 148 GIKLCEALRKQYDFDAISLMPTNLYGPGDNYDPNNSHVLPSLIRKFYEAKINNLDKVICW 207
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
G+G HV DLS A+EN P+ N+ + + +++ +A + A+ G
Sbjct: 208 GTGYPMREFLHVDDLSEASIYALENWYPKKEELKYMNVGTGKDISIRELATIIAKEIGFE 267
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
EI K G K+ N+ +++ LGW S L + +K + Y+
Sbjct: 268 GEIEWDVSKPDGTPKKQL----NISKFSK-------LGWSSKIKLSDGIKNTIDCYI 313
>gi|298490156|ref|YP_003720333.1| NAD-dependent epimerase/dehydratase ['Nostoc azollae' 0708]
gi|298232074|gb|ADI63210.1| NAD-dependent epimerase/dehydratase ['Nostoc azollae' 0708]
Length = 316
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 14 TNNNFRLQRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
T N + + + AK + +K+ +F S++ IY A+ P E KP + + + K
Sbjct: 99 TERNINTTQVLLEAAKDARNLKRLVFASTSSIYGDAETLPTNEEIHPKPVSPY-GITKLA 157
Query: 73 SENFSN---------WASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNI 122
+E + S R + G D FF ++ +P+ G G Q +
Sbjct: 158 AERLCGLYQKNFGVPFVSLRYFTVYGPRQRPDMAFNKFFKAVLEDEAIPVYGDGQQTRDF 217
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
V D + A PEA IFN+ V L + ++ G P++ H + KA
Sbjct: 218 TFVSDAVAANLAAATVPEAVGE-IFNIGGGSRVVLAEVLDTMSEIVGKPIKRNHIE-KAM 275
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
G DA+ H A+ A+ ILG+ +L E L++ +E
Sbjct: 276 G-DAR--------HTAADVSKARKILGYEPRISLREGLQQEWE 309
>gi|338534739|ref|YP_004668073.1| UDP-glucose 4-epimerase [Myxococcus fulvus HW-1]
gi|337260835|gb|AEI66995.1| UDP-glucose 4-epimerase [Myxococcus fulvus HW-1]
Length = 314
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 88/229 (38%), Gaps = 26/229 (11%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKP--------D 62
F + N R + + A+ SGVK+ +F S+ G IY D P E +P
Sbjct: 87 FDADVNIRGMLNLLEAARVSGVKKVIFSSTGGAIYGEQDVFPAPESHPTRPISPYGVSKA 146
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQ 118
+G + + Y ++ + + R + G N E F R++ + I G G Q
Sbjct: 147 SGELYLGYYRAQYGLPYVALRYANVYGPRQNPHGEAGVVAIFSQRLIAGQGCTIFGEGKQ 206
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
+ D++ LA E + NI V ++ + L A+AAG V + H
Sbjct: 207 TRDFVFGPDVARANRLAFEKDYVGAINIGTGVE---TDINRLYALLAEAAGSSVPVTHAP 263
Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
K P + + A+ +LGW ++ E L+ E +
Sbjct: 264 GK----------PGEQLRSCVDNALARKVLGWEPGVDVREGLRRTIEYF 302
>gi|325679491|ref|ZP_08159071.1| NAD dependent epimerase/dehydratase family protein [Ruminococcus
albus 8]
gi|324108778|gb|EGC03014.1| NAD dependent epimerase/dehydratase family protein [Ruminococcus
albus 8]
Length = 337
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 67/173 (38%), Gaps = 43/173 (24%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN----FSNWASFRPQYMI 88
KQF++ISSA Y+ KP G+V E+ EN +S +Y++
Sbjct: 90 TKQFIYISSASAYQ-------------KPPKGYVITEETPLENPYWEYSRNKKACEEYLM 136
Query: 89 GS------------------------GNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIA 123
G G + D W RI +PV I G G I
Sbjct: 137 GLYRDKGFPVTIVRPSHTYDERSVPLGVHGDGGSWQVVKRIKEGKPVIIHGDGTSLWTIT 196
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
H D + V NP+A +F++ SD +V+ + + A+A G+ ++ H
Sbjct: 197 HNSDFAKAYAGLVGNPKAI-GEVFHITSDESVSWNEIYGYIAEALGVQLKAYH 248
>gi|46578735|ref|YP_009543.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603701|ref|YP_968101.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris DP4]
gi|387152162|ref|YP_005701098.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris RCH1]
gi|46448147|gb|AAS94802.1| NAD-dependent epimerase/dehydratase family protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|120563930|gb|ABM29674.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris DP4]
gi|311232606|gb|ADP85460.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris RCH1]
Length = 341
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEP--PHVEGDVVKPDAGHVQVEKYISENFSN------- 78
A+ +G K F++ +S+ Y DEP P VE + KP + + V KY++E +++
Sbjct: 128 ARDAGAKSFVYAASSSTY--GDEPTLPKVEDIIGKPLSPYA-VTKYVNELYADVFARCYG 184
Query: 79 WASFRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
+ + +Y G +D +WF ++R V + G G + ++ ++
Sbjct: 185 FTAIGLRYFNVFGQRQDPFGAYAAVIPQWFAS-LLRGETVFVNGDGETSRDFCYIDNVVQ 243
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA-KKA 189
LA P A ++N+ + TL+ + L + E+V + P+AAG +
Sbjct: 244 ANILASLAPAEARDKVYNVAFGQRTTLNELFDLIRE------EVVRHKPEAAGATCVHRD 297
Query: 190 FPFRNM-HFYAEPRAAKDILGWRSTTNLPEDLK 221
F ++ H A+ A+ +LG+ ++ E L+
Sbjct: 298 FRAGDVRHSLADITRAQTLLGYAPVYDVREGLR 330
>gi|77464089|ref|YP_353593.1| NAD-dependent dehydratase/epimerase [Rhodobacter sphaeroides 2.4.1]
gi|77388507|gb|ABA79692.1| NAD-dependent dehydratase/epimerase [Rhodobacter sphaeroides 2.4.1]
Length = 368
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G Q + HVRD++ LA+E P+AA + N+ S A T+ G+A+L A+A G P
Sbjct: 243 GEQKRDFVHVRDVARAFRLALETPDAA-GEVINVGSGAAYTIAGVARLLAEAMGRP---- 297
Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
P+ +D ++ RN +A+ A+ IL + L + L +
Sbjct: 298 ELTPEI--LDRARSGDIRNC--FADISKARSILNFEPRHRLEDSLGD 340
>gi|441154723|ref|ZP_20966598.1| putative reductase [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440618139|gb|ELQ81219.1| putative reductase [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 328
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 25/177 (14%)
Query: 35 QFLFISSAGIYKPADEPPHVE-GDVV--KPDAGHVQ-VEKYISENFSNWASF-------- 82
+++++S+ +Y+ P H E G +V PDA V E + A+F
Sbjct: 85 RYVYVSTGSVYRHPAGPGHTEAGPLVDGSPDAEAVAYAEDKRGGELAALAAFGEDRTVLA 144
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS---GMQFTNIAHVRDLSSMLTLAVENP 139
R ++G N W+ RI R PV PG G+Q+ + VRDL++ + A E
Sbjct: 145 RAGMILGPWENIGRLPWWLTRIARGGPVLAPGPRDLGLQYID---VRDLAAWVLHAAET- 200
Query: 140 EAASSNIFNLVSDRA-VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPF 192
S +NL+S+ T+ + + C G E+ P+ AAG+ P
Sbjct: 201 --GLSGPYNLISEPGHATMGELLEACVAVTGSDAELRWSGPEEILAAGLAPWTELPV 255
>gi|118579849|ref|YP_901099.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM
2379]
gi|118502559|gb|ABK99041.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM
2379]
Length = 322
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 99/254 (38%), Gaps = 47/254 (18%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKP 61
+NN +Q + + +GVK+ LF+ S IY + A +P P + V
Sbjct: 82 HNNLLIQENIIHNSWKNGVKRLLFLGSTCIYPRLAPQPLKEEYLMSGPLEPTNDAYAVAK 141
Query: 62 DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVP 111
AG Q Y + +N+ + P + G G+N D E ++RK V
Sbjct: 142 IAGIYQCRSYNRQYGTNYLAIMPNNLYGPGDNFDLETSHVLPALIRKFHEAKESEASTVT 201
Query: 112 IPGSGMQFTNIAHVRDLSS----MLTL-------AVENPEAASSNIFNLVSDRAVTLDGM 160
+ GSG V DL+ ++ L + +P A + + N+ S +++ +
Sbjct: 202 VWGSGSPLREFLQVDDLAEACLFLMNLDDDRFDTLLNDPVAPA--LINVGSGEELSIRDL 259
Query: 161 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 220
A L + G E++ K G K A +H LGWR T L E +
Sbjct: 260 ALLVKEITGFDGELLFDRDKPDGTPRKLA-DLSRIH----------TLGWRHRTGLKEGI 308
Query: 221 KERFEEYVKIGRDK 234
++ +++ G +
Sbjct: 309 AAAYQWFLENGSGR 322
>gi|389843900|ref|YP_006345980.1| UDP-glucose 4-epimerase [Mesotoga prima MesG1.Ag.4.2]
gi|387858646|gb|AFK06737.1| UDP-glucose 4-epimerase [Mesotoga prima MesG1.Ag.4.2]
Length = 314
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 34/239 (14%)
Query: 10 ALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPAD--EPPHVEGDVVKPDAGHVQ 67
A+ + RL + A + G+K+ +F S+ G D P E ++ KP + +
Sbjct: 92 AMVNIIGSLRLLKIAAKY----GLKKVIFSSTGGAIYGDDVKRIPTDEEELPKPLSPY-G 146
Query: 68 VEKYISENFSNWAS---------FRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPG 114
+ KY +EN+ + S R + G + E F +R++ + V I G
Sbjct: 147 IAKYATENYLRFFSSELGIKYTVLRYANVYGPRQDPYGEAGVVAIFSERMLHNQEVVIFG 206
Query: 115 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI 174
G + +V D++ LA+E E + + N+ + +++ + + AG E
Sbjct: 207 DGECVRDYVYVGDVARANLLAIEKCE---NTVINIGTGIGTSVNELFDIMKPIAGYSREA 263
Query: 175 VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
VH +P+ D KK+ A+ +LGW +T L +KE EY + G D
Sbjct: 264 VHKEPRPG--DVKKSI--------LNIERARSLLGWEPSTQLERGIKETI-EYFRSGLD 311
>gi|430747106|ref|YP_007206235.1| nucleoside-diphosphate-sugar epimerase [Singulisphaera acidiphila
DSM 18658]
gi|430018826|gb|AGA30540.1| nucleoside-diphosphate-sugar epimerase [Singulisphaera acidiphila
DSM 18658]
Length = 336
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F + + RP+ + G G Q AHV D+ + L V++P +A ++N+ S +++
Sbjct: 195 FVKQALAGRPITVYGDGSQTRCFAHVADVVAALVKLVDHP-SAIGQVYNIGSSEEISIGA 253
Query: 160 MAKLCAQAAGLPVEIVH 176
+A L + +G EIVH
Sbjct: 254 LASLIKKLSGSTSEIVH 270
>gi|229136782|ref|ZP_04265431.1| GDP-fucose synthetase [Bacillus cereus BDRD-ST196]
gi|228646703|gb|EEL02889.1| GDP-fucose synthetase [Bacillus cereus BDRD-ST196]
Length = 314
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 94/246 (38%), Gaps = 46/246 (18%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N +Q V D A SGV++ LF+ S IY +P E + G++ +
Sbjct: 83 DNLMIQTNVIDSAYRSGVEKLLFLGSTCIYPKLAPQPLKEEYLLTGELEPTNEPYALAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG E Y + + + S P + G +N D ++RK V +
Sbjct: 143 AGIKMCESYNRQYGTKYISAMPTNLYGQNDNFDLHTSHVLPALIRKFHEAKENNAEFVEV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G + DL+ + N E + I N+ +++ +A G
Sbjct: 203 WGTGTPLREFLYSDDLADACVYLMNNYEG--NEIVNIGVGEDLSIKELAGKVKATVGFTG 260
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
E+ K G PR D+ LGW++TT+L E LK+ ++ +
Sbjct: 261 ELRFDTSKPDGT----------------PRKLVDVTKINSLGWKATTSLDEGLKKAYDWF 304
Query: 228 VKIGRD 233
++ ++
Sbjct: 305 LQTEKE 310
>gi|410666645|ref|YP_006919016.1| UDP-glucuronate 5'-epimerase [Thermacetogenium phaeum DSM 12270]
gi|409104392|gb|AFV10517.1| UDP-glucuronate 5'-epimerase [Thermacetogenium phaeum DSM 12270]
Length = 316
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 11/178 (6%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----KPDAGHVQVEKYI 72
N R + + + AK GVKQF+F SS+ +Y P E D V P A + +
Sbjct: 103 NVRGTQNLLELAKEWGVKQFVFASSSSVYGVNPHVPWREDDCVLMPISPYAATKVAGELL 162
Query: 73 SENFSN-----WASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHVR 126
+S+ + + R + G D F R++ KR P+P+ G G + ++
Sbjct: 163 GHVYSHLYGIRFIALRFFTVYGPRQRPDLAIHKFARLMLKREPIPVYGDGTSRRDYTYID 222
Query: 127 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
D+ + A++ + + NL ++R V+L + + + G+ ++ + P+ +
Sbjct: 223 DIIQGVRAAMDYTK-TQYEVINLGNNRTVSLMELIRALEEVLGVEAKLEYLPPQPGDV 279
>gi|259414846|ref|ZP_05738769.1| GDP-L-fucose synthetase [Silicibacter sp. TrichCH4B]
gi|259349297|gb|EEW61044.1| GDP-L-fucose synthetase [Silicibacter sp. TrichCH4B]
Length = 312
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 90/231 (38%), Gaps = 36/231 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N ++ +A A + V++FLF+ S+ IY K A +P P E + A
Sbjct: 86 NLMIETNIAQAAHEADVERFLFLGSSCIYPKFAPQPIPEDSLLTGALEPTNEWYAIAKIA 145
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRK---------RPVPIP 113
G ++ Y + +W S P + G G+N D ++RK V +
Sbjct: 146 GIKLMQAYRQQYGRDWISAMPTNLYGPGDNYDLNSSHVLPALLRKFHEAKAAGATSVELW 205
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
GSG H DL+ L ++ E + + N+ S V++ +A+ A+ G E
Sbjct: 206 GSGTPLREFMHCDDLADALVFLLK--EYSGHSHVNVGSGTEVSIRALAETIARVVGYEAE 263
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
+V +D +K +H LGW L + +++ +
Sbjct: 264 LV-FDASKPDGTPRKLMDSTTLHR----------LGWNQARPLEDGIRQTY 303
>gi|302522715|ref|ZP_07275057.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. SPB78]
gi|302431610|gb|EFL03426.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. SPB78]
Length = 298
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
G G Q + HV D + ++ L +E+ A + + V+++AV +A+ A GLPV
Sbjct: 187 GDGTQAWSAVHVSDAARLIRLGLESAPAGTR--LHAVAEQAVPTRAIAEAIGAALGLPV- 243
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFY-----AEPRAAKDILGWR-STTNLPEDL 220
V DP+ DA+K F F + HF+ A+ A +D+L W S L ED+
Sbjct: 244 -VSVDPE----DAEKHFGFVS-HFFGRTLTADSTATRDLLTWTPSGPTLLEDI 290
>gi|441500487|ref|ZP_20982645.1| UDP-glucose 4-epimerase [Fulvivirga imtechensis AK7]
gi|441435749|gb|ELR69135.1| UDP-glucose 4-epimerase [Fulvivirga imtechensis AK7]
Length = 371
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R++ +R I G Q + HVRD++ LA+E ++A +FN+ S + ++
Sbjct: 230 FSSRLLNERAPLIFEDGNQQRDFVHVRDVARACRLALETDQSAQE-VFNIGSGESYSIRA 288
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A+L A+ G + P+ G + R H +A+ A ILG+ +L E
Sbjct: 289 LAQLLAETMGKEYIL----PEITG--EYRVGDIR--HCFADISKANRILGYSPQVSLQEG 340
Query: 220 LKERFE 225
++E E
Sbjct: 341 MRELVE 346
>gi|319789066|ref|YP_004150699.1| NAD-dependent epimerase/dehydratase [Thermovibrio ammonificans
HB-1]
gi|317113568|gb|ADU96058.1| NAD-dependent epimerase/dehydratase [Thermovibrio ammonificans
HB-1]
Length = 324
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 26/221 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV-----VKPDAGHVQVEKYISENFSN 78
+ + K G+K+F+ S++ +Y A +P + D+ + P A + + +S +
Sbjct: 111 LLELMKEFGLKKFVLASTSSLY--AGQPMPFKEDLPVNTPISPYAASKKAAEVMSYTYHY 168
Query: 79 WASF-----RPQYMIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
F R + G D + F I RPV + G G Q + +V D++
Sbjct: 169 LYGFDVTVVRYFTVYGPAGRPDMSIFRFIKWIDEGRPVEVYGDGTQSRDFTYVDDIAEGT 228
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
A E I NL +R L + +L + G EI++ A + A
Sbjct: 229 IRAYET--ETGYQIINLGGNRPHQLKEVIRLIEEYLGKKAEIIYKPFHKADLKAT----- 281
Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
+A+ A++ILGW L E L+ R E+ K RD
Sbjct: 282 -----WADITKAREILGWEPKVPLEEGLR-RTVEWHKENRD 316
>gi|310643727|ref|YP_003948485.1| nad dependent epimerase/dehydratase [Paenibacillus polymyxa SC2]
gi|309248677|gb|ADO58244.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus
polymyxa SC2]
Length = 309
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFS----NW 79
+ +GV + +F S++G+Y + E D V+P +G+ + E YI + N+
Sbjct: 103 CREAGVSKIIFASTSGVYGELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFYRLYGLNY 162
Query: 80 ASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
R + G G E F DR+ + P+ I G G Q + +V+D+ A
Sbjct: 163 TILRYGNVYGPGQAAKGEGGVVAIFMDRLKKGSPLLIHGDGTQTRDFVYVKDVVRANMAA 222
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 195
+ AA ++ + R +++ +A + G V V Y P G ++
Sbjct: 223 I---HAADQRTVHVSTGRTTSINRLAYDLLKLHGSSVRPV-YSPARTG----------DI 268
Query: 196 HFYAEPRA-AKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAM 237
H A A+ L W + LKE + +G DK+ +
Sbjct: 269 HHSCLSNAVARHWLHWEPLYGISAGLKETYVS--SMGTDKEGI 309
>gi|427725161|ref|YP_007072438.1| UDP-glucuronate 5'-epimerase [Leptolyngbya sp. PCC 7376]
gi|427356881|gb|AFY39604.1| UDP-glucuronate 5'-epimerase [Leptolyngbya sp. PCC 7376]
Length = 316
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
FF ++ +PI G G Q + + D LA++ PEA IFN+ V L+
Sbjct: 195 FFKAAIKGTTIPIYGDGKQTRDFTFISDAVQANFLAMKTPEAVGE-IFNIGGGSRVILND 253
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+ G P+ +Y +A G DA+ H A+ AK ILG+ +L E
Sbjct: 254 VLDEIDNIVGKPI-TRNYGDRARG-DAR--------HTSADVTKAKTILGYDPQVSLSEG 303
Query: 220 LKERFE 225
L+ +E
Sbjct: 304 LRHEWE 309
>gi|390573507|ref|ZP_10253678.1| GDP-L-fucose synthase [Burkholderia terrae BS001]
gi|389934502|gb|EIM96459.1| GDP-L-fucose synthase [Burkholderia terrae BS001]
Length = 313
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEP--------------PHVEGDVVKPD 62
N ++ + + A +G+ + F+ S+ IY P D P P E +
Sbjct: 87 NLAVEANIINGAHRAGIDRLCFLGSSCIY-PRDCPQPIKEEYLLTGPLEPTNEPYAIAKI 145
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG E Y + + S P + G+ +N D ++RK + +
Sbjct: 146 AGVKMCESYNRQYGRRYVSVMPTNLYGANDNYDLNNSHVLPALIRKTHEAKARGDSELVV 205
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
GSG V DL+ +E+ S +FN+ + + VT+ +A+ G
Sbjct: 206 WGSGKPMREFLFVDDLADACVFLMES--GVSEGLFNVGTGQDVTIRELAETVMSVVGFDG 263
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
+IV K G K N+ E LGW++TT+L E + E + +++
Sbjct: 264 KIVFDASKPDGTPRK----LLNVERMRE-------LGWQATTSLREGIAEAYADFL 308
>gi|425455837|ref|ZP_18835548.1| Similar to tr|Q60B69|Q60B69 [Microcystis aeruginosa PCC 9807]
gi|389803206|emb|CCI17851.1| Similar to tr|Q60B69|Q60B69 [Microcystis aeruginosa PCC 9807]
Length = 326
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYI----SENFSNWA 80
+GVK F+F+SS I+ A E + E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDDILNENSPCHPDSPYGRSKLQAEQALIQLAKDSDMTWT 164
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVE 137
RP + G GN + DR+++ KR +P+P G+ + V +L + + ++
Sbjct: 165 ILRPTLVYGLGNRAN-----MDRLMKLIKRGLPLPFGAIKNRRSFVFVGNLVAAIITCLD 219
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
+P AS+ IF + ++AV+ + +L AQ P +++
Sbjct: 220 HPN-ASNQIFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|152967949|ref|YP_001363733.1| NAD-dependent epimerase/dehydratase [Kineococcus radiotolerans
SRS30216]
gi|151362466|gb|ABS05469.1| NAD-dependent epimerase/dehydratase [Kineococcus radiotolerans
SRS30216]
Length = 337
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 FRPQYMIGSG-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
P ++ G G N D + W R+ + +PG G++ + H D++
Sbjct: 171 LHPGHISGPGWPVITPLGNLDPQVW--RRLSTGEELLVPGLGLETLHHVHADDVAQGFER 228
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 166
A+ +P AA+ F++VSDRA+T+ G A+ A+
Sbjct: 229 ALADPGAAAGESFHVVSDRALTVRGFAEAAAR 260
>gi|417778329|ref|ZP_12426135.1| GDP-L-fucose synthetase [Leptospira weilii str. 2006001853]
gi|410781400|gb|EKR65973.1| GDP-L-fucose synthetase [Leptospira weilii str. 2006001853]
Length = 316
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 95/241 (39%), Gaps = 38/241 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D VK+ +F+ S+ IY +P DE ++G + +
Sbjct: 83 SNLQIQNNIIDACYRFKVKKLVFLGSSCIYPKFAKQPMDEGQLLDGKLEPTNEPYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F + ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFHEAKIKDLPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVEN----PEAASSNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D++ ++N +A N+ S V++ +A+ +
Sbjct: 203 WGTGKPLREFLYSDDMARACVFLMKNYDVTGDAKGGEHVNVGSGIEVSIRELAETVKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
G ++ +D +K +H +GWR L E ++ FE+Y+
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWRHQVGLKEGIRLAFEDYL 311
Query: 229 K 229
+
Sbjct: 312 R 312
>gi|390943937|ref|YP_006407698.1| nucleoside-diphosphate-sugar epimerase [Belliella baltica DSM
15883]
gi|390417365|gb|AFL84943.1| nucleoside-diphosphate-sugar epimerase [Belliella baltica DSM
15883]
Length = 320
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 97/245 (39%), Gaps = 50/245 (20%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N ++Q + + + + VK+F+F+ S+ IY K A +P P E +
Sbjct: 84 NMQIQNNLINASLKADVKKFIFLGSSCIYPKLAPQPLKEDYLLTSSLEPTNEWYAIAKIT 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK-------------RP 109
G E + ++ S P + GS +N D + ++RK P
Sbjct: 144 GVKACEAIRKQYGKDYISLMPTNLYGSFDNFDLKTSHVLPAMIRKFHDAKHSTVNGQQAP 203
Query: 110 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 169
V + GSG HV D++ + A+EN N++N+ + +T+ +A++ + G
Sbjct: 204 VTLWGSGTPMREFLHVDDMADAVVFALEN--QFQDNLYNVGTGTDLTIKELAEMIQRIVG 261
Query: 170 LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERF 224
+I+ K G PR D+ GW++ L E +K +
Sbjct: 262 HEGDIIWDSSKPDGT----------------PRKLMDVSKMTSAGWQAKIGLEEGIKGTY 305
Query: 225 EEYVK 229
+ +++
Sbjct: 306 QWFLE 310
>gi|241203190|ref|YP_002974286.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857080|gb|ACS54747.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 306
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV--------------EGDVVKP 61
N ++ V A +GV++ LF+ S+ IY P D P + E +
Sbjct: 83 QNLMIETNVVHAAWQAGVERMLFLGSSCIY-PRDCPQPIREEYLLTGPLEQTNEAYAIAK 141
Query: 62 DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVP 111
AG E Y + + + S P + G +N D + ++RK R +
Sbjct: 142 IAGVKLCESYNRQYGTRYVSGMPTNLYGPNDNYDLDSSHVMPALIRKVHEAKIRGDRQLV 201
Query: 112 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
+ GSG +V D++ +E + S + N+ + +T+ +A+ + G
Sbjct: 202 VWGSGRPMREFLYVDDMADACVFLME--KEVSEGLINIGTGEDITIRELAETIMRVVGFT 259
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
EIV+ K G K R LGW++TT+L + + + ++
Sbjct: 260 GEIVYDQTKPDGTPRKLMSVDR-----------LSALGWKATTSLGDGIARAYADF 304
>gi|322418953|ref|YP_004198176.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18]
gi|320125340|gb|ADW12900.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18]
Length = 343
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 35/221 (15%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 87
A+ +GVK+F++ +S+ Y + P VE + +P + + V KY++E +++ F Y
Sbjct: 129 ARDAGVKRFVYAASSSTYGDHPDLPKVEDRIGRPLSPYA-VTKYVNELYAD--VFARSYG 185
Query: 88 IGS---------GNNKDCE--------EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL-- 128
I S G +D + +W ++R+ V I G G + HV+++
Sbjct: 186 IESIGLRYFNVFGRRQDPDGAYAAVIPKWVAS-MLRREQVFINGDGETSRDFCHVQNVVQ 244
Query: 129 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID-AK 187
+++L+ NP A + ++N+ +L+ + +L P+AA + A
Sbjct: 245 ANLLSATTGNP-GAVNQVYNVAVGERTSLNQLFQLIRD---------FLQPEAASLTPAY 294
Query: 188 KAFPFRNM-HFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
+ F ++ H A+ A+ +LG++ T + E L E + Y
Sbjct: 295 REFRAGDVRHSLADISKAERLLGYQPTHRIKEGLGEAMQWY 335
>gi|418687726|ref|ZP_13248885.1| GDP-L-fucose synthetase [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418742007|ref|ZP_13298380.1| GDP-L-fucose synthetase [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|410738050|gb|EKQ82789.1| GDP-L-fucose synthetase [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750365|gb|EKR07345.1| GDP-L-fucose synthetase [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 314
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 94/239 (39%), Gaps = 38/239 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D K+ LF+ S+ IY +P DE ++G + V
Sbjct: 83 SNIQIQNNIIDACYRFKTKKLLFLGSSCIYPKFAKQPMDEAQLLDGKLEPTNEPYAVAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F++ ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFYEAKIKNFPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAAS----SNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D++S ++N + N+ S V++ +A++ +
Sbjct: 203 WGTGKPLREFLYSDDMASACVFLMKNYDVTGDPKGGEHVNVGSGIEVSIRELAEVVKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
G ++ +D +K +H +GW+ L E ++ FE+Y
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWKHQVELKEGIRLAFEDY 310
>gi|359144941|ref|ZP_09178785.1| NAD-dependent protein [Streptomyces sp. S4]
Length = 272
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 71/185 (38%), Gaps = 28/185 (15%)
Query: 35 QFLFISSAGIYKP-----ADE-PPHVEGDVVKPDA-----------GHVQVEKYISENFS 77
++ ++SS +Y P ADE P V GD PDA G + + E +
Sbjct: 25 RYAYVSSRSVYGPPVARGADESAPVVAGD---PDAEARSYAEDKRGGELAAARAFGEERT 81
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
WA R ++G N W+ RI R VP PG RDL++ L A
Sbjct: 82 LWA--RAGLILGPWENIGRLPWWLTRIARGGEVPAPGPRDLPVQYIDARDLAAWLLAAG- 138
Query: 138 NPEAASSNIFNLVSDRAVTLDG-MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 196
A ++LVS T G + C G E+ P+A + A A P+ +
Sbjct: 139 --RAGLHGAYDLVSPAGFTTMGELLDTCVTVTGSTAELRWLTPEA--VLAAGAEPWLELP 194
Query: 197 FYAEP 201
+ P
Sbjct: 195 VWIPP 199
>gi|288961614|ref|YP_003451924.1| UDP-glucose 4-epimerase [Azospirillum sp. B510]
gi|288913894|dbj|BAI75380.1| UDP-glucose 4-epimerase [Azospirillum sp. B510]
Length = 314
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R+ R V I G G Q + V D+ +L LA+E A + +FNL + RA +L
Sbjct: 196 FARRVARGEDVEIHGDGQQVRDFVFVGDVVRILALAMER-RFAGAQLFNLCTGRATSLVM 254
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGI 184
+ ++ + G V H +P+A I
Sbjct: 255 LLEVLQELCGSKVRRRHTEPRAGDI 279
>gi|398860812|ref|ZP_10616456.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM79]
gi|398234252|gb|EJN20135.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM79]
Length = 309
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ LF SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIGSLNVCEAMRQTGVKRVLFASSAAVYGNNGEGESIDEDTPKAPLTPYAADKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
++ ++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 155 HYFDF--YRRQHSLEPVIFRFFNIFGPRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHY 177
+ +V DL +L A+E P+ + N+ ++A TL M + G LP V Y
Sbjct: 213 TRDFVYVEDLVGVLVQAIEKPQVEVGAV-NVGWNQATTLKQMLEALEAVVGELPP--VSY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|318058297|ref|ZP_07977020.1| putative oxidoreductase [Streptomyces sp. SA3_actG]
gi|318078546|ref|ZP_07985878.1| putative oxidoreductase [Streptomyces sp. SA3_actF]
Length = 298
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
G G Q + HV D + ++ L +E+ A + + V+++AV +A+ A GLPV
Sbjct: 187 GDGTQAWSAVHVSDAARLIRLGLESAPAGTR--LHAVAEQAVPTRAIAEAIGAALGLPV- 243
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFY-----AEPRAAKDILGWR-STTNLPEDL 220
V DP+ DA+K F F + HF+ A+ A +D+L W S L ED+
Sbjct: 244 -VSVDPE----DAEKHFGFVS-HFFGRTLTADSTATRDLLTWAPSGPTLLEDI 290
>gi|398879871|ref|ZP_10634952.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM67]
gi|398195189|gb|EJM82240.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM67]
Length = 309
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + SGVK+ LF SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIGSLNVCEAMRQSGVKRVLFASSAAVYGNNGEGQSIDEDTPKEPLTPYASDKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
++ ++ +R Q+ + G +D F +R P+ + G G Q
Sbjct: 155 HYFDF--YRRQHALEPVIFRFFNIFGPRQDPSSPYSGVISIFSERAQNGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHY 177
+ +V DL +L A+E P+ + N+ ++A TL M + A G LP V Y
Sbjct: 213 TRDFVYVEDLVDVLVQAIEKPQVEVGAV-NVGWNQATTLKQMLEALKVAVGELPP--VSY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|398886471|ref|ZP_10641348.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM60]
gi|398189786|gb|EJM77052.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM60]
Length = 309
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + SGVK+ LF SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIGSLNVCEAMRQSGVKRVLFASSAAVYGNNGEGQSIDEDTPKEPLTPYASDKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
++ ++ +R Q+ + G +D F +R P+ + G G Q
Sbjct: 155 HYFDF--YRRQHALEPVIFRFFNIFGPRQDPSSPYSGVISIFSERAQNGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHY 177
+ +V DL +L A+E P+ + N+ ++A TL M + A G LP V Y
Sbjct: 213 TRDFVYVEDLVDVLVQAIEKPQVEVGAV-NVGWNQATTLKQMLEALKVAVGELPP--VSY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|398999037|ref|ZP_10701790.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM18]
gi|398132656|gb|EJM21918.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM18]
Length = 309
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ L+ SSA +Y E ++ D K V+K SE
Sbjct: 95 QSNFIGSLNVCEAMRQAGVKRVLYASSAAVYGNNGEGESIDEDTPKAPLTPYAVDKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
++ ++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 155 HYFDF--YRRQHGLEPVIFRFFNIFGPRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHY 177
+ +V DL +L A+E P+ + N+ ++A TL M + G LP V Y
Sbjct: 213 TRDFVYVEDLVDVLVQAIEKPQVEVGAV-NVGWNQATTLKQMLEALEAVVGKLPP--VSY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|333023572|ref|ZP_08451636.1| putative NAD-dependent epimerase/dehydratase [Streptomyces sp.
Tu6071]
gi|332743424|gb|EGJ73865.1| putative NAD-dependent epimerase/dehydratase [Streptomyces sp.
Tu6071]
Length = 298
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
G G Q + HV D + ++ L +E+ A + + V+++AV +A+ A GLPV
Sbjct: 187 GDGTQAWSAVHVSDAARLIRLGLESAPAGTR--LHAVAEQAVPTRAIAEAIGAALGLPV- 243
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFY-----AEPRAAKDILGWR-STTNLPEDL 220
V DP+ DA+K F F + HF+ A+ A +D+L W S L ED+
Sbjct: 244 -VSVDPE----DAEKHFGFVS-HFFARTLTADSTATRDLLTWAPSGPTLLEDI 290
>gi|222529140|ref|YP_002573022.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor bescii
DSM 6725]
gi|222455987|gb|ACM60249.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor bescii
DSM 6725]
Length = 305
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 27/218 (12%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-- 81
+ D+ VK+F+F SSA +Y P E ++P++ + + K SE + +
Sbjct: 98 LLDYCVKYKVKKFIFASSAAVYGEPKYIPIDENHPLRPESFY-GLSKLTSEEYIKMFAHK 156
Query: 82 FRPQYMIGSGNN-----KD-CEEW-----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
F +Y+I +N +D C E F +R++ + V I G G Q + +V D++
Sbjct: 157 FHFEYIIFRYSNVYGPRQDPCGEGGVVSIFCERMLGSKDVIIYGDGTQTRDFIYVEDVAE 216
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
+A+ E++ S FNL + + ++++ + ++ + G V+ + I
Sbjct: 217 ANCIAL---ESSVSGTFNLSTGKNISVNELFEILSGLTGYKKSPVYQSKRPGDI------ 267
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
H K++ G+ +L E LK+ E ++
Sbjct: 268 ----AHSCLSNNLLKNVFGFSPQFSLLEGLKKTVECFI 301
>gi|334120384|ref|ZP_08494465.1| UDP-glucuronate 4-epimerase [Microcoleus vaginatus FGP-2]
gi|333456731|gb|EGK85361.1| UDP-glucuronate 4-epimerase [Microcoleus vaginatus FGP-2]
Length = 316
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 20/202 (9%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFSNWA----SFRP 84
+++F++ SS+ IY A+ P E +P + + + E+ + N+ S R
Sbjct: 119 LQKFVYASSSSIYGNAESFPTTENACPQPVSPYGITKLAGERLCGLYYKNFGLPTTSLRY 178
Query: 85 QYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 143
+ G D FF I+ + I G G+Q + + D + A E PEAA
Sbjct: 179 FTVYGPRQRPDMAFHKFFKSILFDEAISIFGDGLQTRDFTFISDCVAANLAAAEVPEAA- 237
Query: 144 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA 203
+FN+ V L + + P+ I +AA DA+ H A+
Sbjct: 238 GEVFNIGGGSRVVLKEVIDTIERIVDRPIRIDF--TEAARGDAR--------HTSADVSK 287
Query: 204 AKDILGWRSTTNLPEDLKERFE 225
AK ILG++ L E L+ +E
Sbjct: 288 AKKILGYQPQVALEEGLRREWE 309
>gi|421093169|ref|ZP_15553896.1| GDP-L-fucose synthetase [Leptospira borgpetersenii str. 200801926]
gi|410364132|gb|EKP15158.1| GDP-L-fucose synthetase [Leptospira borgpetersenii str. 200801926]
gi|456888065|gb|EMF99063.1| GDP-L-fucose synthetase [Leptospira borgpetersenii str. 200701203]
Length = 318
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 96/241 (39%), Gaps = 38/241 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D VK+ LF+ S+ IY +P DE ++G + +
Sbjct: 83 SNLQIQNNIIDACYRFKVKKLLFLGSSCIYPKFAKQPMDEGQLLDGKLEPTNEPYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F++ ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFYEAKIKDLPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVEN----PEAASSNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D++ ++N +A N+ S V++ +A+ +
Sbjct: 203 WGTGKPLREFLYSDDMARACVFLMKNYDVTGDAKGGEHVNVGSGIEVSIRELAETVKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
G ++ +D +K +H +GW+ L E ++ FE+++
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWKHQVELKEGIRLAFEDFL 311
Query: 229 K 229
+
Sbjct: 312 R 312
>gi|339010925|ref|ZP_08643494.1| putative nucleotide sugar epimerase [Brevibacillus laterosporus LMG
15441]
gi|338772259|gb|EGP31793.1| putative nucleotide sugar epimerase [Brevibacillus laterosporus LMG
15441]
Length = 318
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
FF ++ K P+ I G G Q N ++V D+ LA E + ++N+ +R ++L
Sbjct: 196 FFRAMMHKEPIQIYGDGSQSRNFSYVHDVVEANLLASEFGQVG--KVYNIGGEREISL-- 251
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A L +I+ +P A+K R A+ A +G+R T+L +
Sbjct: 252 -----LEAVSLMAKIMQVEPDITFTIAEKGDSRRTC---ADISLAAQQIGYRPHTSLEQG 303
Query: 220 LKERFEEYVKI 230
L ++F++ K+
Sbjct: 304 LYQQFQDIKKL 314
>gi|94972478|ref|YP_595696.1| GDP-L-fucose synthetase-related [Lawsonia intracellularis
PHE/MN1-00]
gi|442556607|ref|YP_007366429.1| NAD-dependent epimerase/dehydratase [Lawsonia intracellularis N343]
gi|94732015|emb|CAJ54032.1| GDP-L-fucose synthetase-related [Lawsonia intracellularis
PHE/MN1-00]
gi|441494054|gb|AGC50745.1| NAD-dependent epimerase/dehydratase [Lawsonia intracellularis N343]
Length = 313
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 94/244 (38%), Gaps = 48/244 (19%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEP--------------PHVEGDVVK 60
++N ++Q V A + GVK+FLF+ S+ IY P D P P E +
Sbjct: 82 SDNLQIQTNVIQTAYTYGVKKFLFLGSSCIY-PRDCPQPIKEEYLLTGPLEPTNEWYAIA 140
Query: 61 PDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW---------FFDRIVRKRP-V 110
AG + Y + + S P + G +N E F + +V P V
Sbjct: 141 KIAGIKLCQAYRKQYGFDAISIMPTNLYGPRDNFHLTESHVLPALLRRFHEAMVNNLPYV 200
Query: 111 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 170
I G+G +V D++S L +E + + N+ T+ ++K A G
Sbjct: 201 TIWGTGTPRREFLYVEDVASACLLLME--KYSELEPINVGYGEDCTIYSLSKTIADVVGF 258
Query: 171 PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFE 225
EIV K G P+ DI LGW+ T +L E +K+ +
Sbjct: 259 KGEIVTDPSKPDG----------------TPQKWLDISKIKSLGWKPTISLYEGIKKTYN 302
Query: 226 EYVK 229
Y++
Sbjct: 303 WYLQ 306
>gi|254444061|ref|ZP_05057537.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae
bacterium DG1235]
gi|198258369|gb|EDY82677.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae
bacterium DG1235]
Length = 324
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 101 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 160
DR+ + + V +PG G + H D + L + N EAA + F++ SD +T D +
Sbjct: 156 IDRMRKGKSVIVPGDGTSLWTVTHNSDFAKGLVGLLGN-EAAVGHAFHITSDEVLTWDQI 214
Query: 161 AKLCAQAAGL 170
+ AQAAG+
Sbjct: 215 YRYTAQAAGV 224
>gi|398948084|ref|ZP_10672564.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM33]
gi|398161092|gb|EJM49335.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM33]
Length = 309
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ LF SSA +Y E ++ D K V+K SE
Sbjct: 95 QSNFIGTLNVCEAMRQAGVKRVLFASSAAVYGNNGEGESIDEDTPKAPLTPYAVDKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
+ ++ +R Q+ + G +D F +R ++ P+ + G G Q
Sbjct: 155 QYFDF--YRRQHGLEPVIFRFFNIFGPRQDPSSPYSGVISIFSERALKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHY 177
+ +V DL +L A+E A + N+ ++A TL M + G LP V Y
Sbjct: 213 TRDFVYVEDLVDLLVQAIEKHRAEVGAV-NVGWNQATTLKQMLEALEAVVGQLPP--VSY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|374320068|ref|YP_005073197.1| UDP-glucose 4-epimerase [Paenibacillus terrae HPL-003]
gi|357199077|gb|AET56974.1| UDP-glucose 4-epimerase [Paenibacillus terrae HPL-003]
Length = 309
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 25/214 (11%)
Query: 32 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SENFSNWASFR 83
GV + +F S++G+Y + E D V+P +G+ + E YI N N+ R
Sbjct: 107 GVSKLIFASTSGVYGELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFHRLNGMNYTILR 166
Query: 84 PQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
+ G G E F DR+ + P+ I G G Q + +V+D+ A+
Sbjct: 167 YGNVYGPGQAAKGEGGVVALFMDRLKKGSPLLIHGDGTQTRDFVYVKDVVRANMAAI--- 223
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
AA ++ + R +++ +A + G V V+ +A I H
Sbjct: 224 RAADQRTVHVSTGRTTSINRLAYDLLKLHGSSVRPVYSATRAGDIH----------HSCL 273
Query: 200 EPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD 233
A+ L W + LKE + + G +
Sbjct: 274 SNAVARHWLRWEPLYGISAGLKETYVSSIGSGNE 307
>gi|182435334|ref|YP_001823053.1| nucleoside-diphosphate-sugar epimerase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178463850|dbj|BAG18370.1| putative nucleoside-diphosphate-sugar epimerase [Streptomyces
griseus subsp. griseus NBRC 13350]
Length = 327
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 23/145 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N R+Q V A ++GV++ LF+ S+ IY +P E + G++ +
Sbjct: 98 DNLRIQLSVVAGAHAAGVERLLFLGSSCIYPRLAPQPIREDALLTGELEPTNEAYALAKI 157
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR----------PVPI 112
AG VQ++ Y + +++ S P + G G+N D E + +R V +
Sbjct: 158 AGIVQIQSYRRQYGASYISAMPTNLYGPGDNFDLETSHVLPALIRRFHEARRDGAPEVTL 217
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVE 137
GSG HV DL++ +E
Sbjct: 218 WGSGSPRREFLHVDDLAAACVTLLE 242
>gi|359459741|ref|ZP_09248304.1| NAD-dependent epimerase/dehydratase [Acaryochloris sp. CCMEE 5410]
Length = 344
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 34 KQFLFISSAGIYKPADEPPHVE------GDVVKPDA--GHVQVEKYISENFSNWASFRPQ 85
K+F+ IS+ G++ + PP E GD+ + G + ++++ +E RP
Sbjct: 121 KRFVHISTIGVHGHIENPPADETYRTSPGDLYQSTKLEGEIWIKQFGAETGLPITIIRPA 180
Query: 86 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 145
+IG G + + + ++V VP G+G ++ HV DL++ LA ++P A +
Sbjct: 181 GIIGPGEKRLLKIY---KMVCSGLVPAIGNGGNLLHLIHVDDLTNCFLLASQHPNAVNE- 236
Query: 146 IFNLVSDRAVTLDGMAKLCAQ 166
+F + +++ M L ++
Sbjct: 237 VFICGNQDSISFKEMVNLISK 257
>gi|326775974|ref|ZP_08235239.1| GDP-L-fucose synthase [Streptomyces griseus XylebKG-1]
gi|326656307|gb|EGE41153.1| GDP-L-fucose synthase [Streptomyces griseus XylebKG-1]
Length = 327
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 23/145 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N R+Q V A ++GV++ LF+ S+ IY +P E + G++ +
Sbjct: 98 DNLRIQLSVVAGAHAAGVERLLFLGSSCIYPRLAPQPIREDALLTGELEPTNEAYALAKI 157
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR----------PVPI 112
AG VQ++ Y + +++ S P + G G+N D E + +R V +
Sbjct: 158 AGIVQIQSYRRQYGASYISAMPTNLYGPGDNFDLETSHVLPALIRRFHEARRDGAPEVTL 217
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVE 137
GSG HV DL++ +E
Sbjct: 218 WGSGSPRREFLHVDDLAAACVTLLE 242
>gi|398339525|ref|ZP_10524228.1| nucleoside-diphosphate-sugar epimerase [Leptospira kirschneri
serovar Bim str. 1051]
gi|418678558|ref|ZP_13239832.1| GDP-L-fucose synthetase [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400321748|gb|EJO69608.1| GDP-L-fucose synthetase [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 314
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 94/239 (39%), Gaps = 38/239 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D K+ LF+ S+ IY +P DE ++G + V
Sbjct: 83 SNIQIQNNIIDACYRFKTKKLLFLGSSCIYPKFAKQPMDEAQLLDGKLEPTNEPYAVAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F++ ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFYEAKIKNFPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAAS----SNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D++S ++N + N+ S V++ +A++ +
Sbjct: 203 WGTGKPLREFLYSDDMASACVFLMKNYDVTGDPKGGEHVNVGSGIEVSIRELAEVVKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
G ++ +D +K +H +GW+ L E ++ FE+Y
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWKHQVELKEGIRLAFEDY 310
>gi|228915817|ref|ZP_04079393.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228843798|gb|EEM88871.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 326
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA--GHVQVEKYI 72
N N + + + ++ G+K+ + +S+ IY DE +V + PD H KY+
Sbjct: 84 NANVLGTKHIIEGSQKYGIKRLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYM 143
Query: 73 SENFSNWA--------SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
+E + A + RP+ + G G+N ++ K +P G+ +I +
Sbjct: 144 AEQAIDHAFAHGLPVITIRPRALFGPGDNAILPRLI--KVCEKGALPRIGTENVLVDITY 201
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 157
V ++ L L + + + +N+ +D + L
Sbjct: 202 VENVVDALLLCMHSQKHTLGQKYNITNDERINL 234
>gi|170290248|ref|YP_001737064.1| NAD-dependent epimerase/dehydratase [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174328|gb|ACB07381.1| NAD-dependent epimerase/dehydratase [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 305
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 29/211 (13%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG----- 89
++ S++ +Y D PPH E ++KP + + ++ S + S +G
Sbjct: 106 SLIYASTSSLYNGID-PPHREDALIKPMDLYTEARYFMERISSVYQSLYGVRSVGLRLFS 164
Query: 90 --------SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
G + + +P I G G Q + HVRD++ +A+ EA
Sbjct: 165 VYGPNERQKGRYANVASQMIWAAMEGKPFIIFGDGNQTRDFIHVRDVARAFIIAM---EA 221
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
S IFN+ + + +A + A+ LP+ + + P + K + +R A+
Sbjct: 222 GVSGIFNVGTGVETSFRELASIIAEK--LPLRL-EFRP-----NPIKNYVYRTC---ADT 270
Query: 202 RAAKDILGWRSTTNLPEDLKERFEEYVKIGR 232
A++ LG+R+ L ++E E Y K GR
Sbjct: 271 SLAEEELGFRAEVGLRRGIEELIEAY-KEGR 300
>gi|429209546|ref|ZP_19200776.1| UDP-glucose 4-epimerase [Rhodobacter sp. AKP1]
gi|428187428|gb|EKX56010.1| UDP-glucose 4-epimerase [Rhodobacter sp. AKP1]
Length = 368
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
G Q + HVRD++ LA+E P+AA + N+ S A T+ G+A+L A+A G P
Sbjct: 243 GEQKRDFVHVRDVARAFRLALETPDAA-GEVINVGSGSAYTIAGVARLLAEAMGRP 297
>gi|189501064|ref|YP_001960534.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeobacteroides
BS1]
gi|189496505|gb|ACE05053.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeobacteroides
BS1]
Length = 304
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 30/221 (13%)
Query: 18 FRLQRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGH----VQVEKYI 72
F L++ VA +++ +FISS G +Y E P E + P+ + + +EKY+
Sbjct: 96 FLLEQCVA-----KKIRKVVFISSGGTVYGIPTEIPVHENNPTNPECSYGITKLVIEKYL 150
Query: 73 SE----NFSNWASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAH 124
+ N+ RP G N + + F +++ + + I G G +
Sbjct: 151 ALFKHLYGLNYVIVRPSNPYGERQNPNSIQGAIPVFLNKVAKGESIDIWGDGEVVRDYIF 210
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
+ DL + A A S IFNL S +L+ + K+ Q G VEI +
Sbjct: 211 IDDLVDGIYKAA--TVKAQSCIFNLGSSTGYSLNYIVKIIRQITGRQVEIKY-------- 260
Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
AK+ F ++ RA K+ L W T+L +++ +E
Sbjct: 261 KAKRTFDIPEIYLDIS-RAGKE-LSWAPVTSLESGIEKTWE 299
>gi|448667430|ref|ZP_21685930.1| NAD-dependent epimerase/dehydratase [Haloarcula amylolytica JCM
13557]
gi|445769998|gb|EMA21066.1| NAD-dependent epimerase/dehydratase [Haloarcula amylolytica JCM
13557]
Length = 327
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
S RP + G + + ++ DR+ + +P G+ +A+V D++S L L E
Sbjct: 156 SVRPTVVYGPHDYTERFAYWVDRVAEYDRIVVPSDGLSLWQMAYVEDVASALRLVAERGT 215
Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFP-FRNMH 196
A + +N+ + A TL L A+ VE + + AAG+D+ FP +R+
Sbjct: 216 AGEA--YNVGDEHAPTLRQWIGLLAKVHETDVETIGVGERELAAAGLDSDD-FPIYRDSP 272
Query: 197 FYAEPRAAKDILGWRST 213
+D LGW ST
Sbjct: 273 HLLSTAKLRD-LGWSST 288
>gi|440755391|ref|ZP_20934593.1| rmlD substrate binding domain protein [Microcystis aeruginosa
TAIHU98]
gi|440175597|gb|ELP54966.1| rmlD substrate binding domain protein [Microcystis aeruginosa
TAIHU98]
Length = 326
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYI----SENFSNWA 80
+GVK F+F+SS I+ A E ++ E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDNILNENSPCHPDSPYGRSKLQAEQALIQLAKDSDMTWT 164
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENP 139
RP + G GN + E +++ KR +P+P G+ + V +L + + +++P
Sbjct: 165 ILRPTLVYGLGNRANMERLM--KLI-KRGLPLPFGAIKNRRSFVFVGNLVAAIITCLDHP 221
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
AA + IF + ++AV+ + +L AQ P +++
Sbjct: 222 NAA-NQIFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|302523156|ref|ZP_07275498.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. SPB78]
gi|302432051|gb|EFL03867.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. SPB78]
Length = 317
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKP------------DA 63
N R+Q V A ++GV++ LF+ S+ IY K A +P H + + P A
Sbjct: 93 NLRIQLSVIAGAHAAGVERLLFLGSSCIYPKHAPQPIHEDALLTGPLEPTNQAYALAKIA 152
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE 97
G QV Y S+ + + S P + G G+N D E
Sbjct: 153 GITQVRSYRSQYGAAYISAMPTNLYGPGDNFDLE 186
>gi|448640639|ref|ZP_21677542.1| hypothetical protein C436_12263 [Haloarcula sinaiiensis ATCC 33800]
gi|445761949|gb|EMA13188.1| hypothetical protein C436_12263 [Haloarcula sinaiiensis ATCC 33800]
Length = 359
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 86/219 (39%), Gaps = 32/219 (14%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV-------QVEKY-------------I 72
V +++ISS Y A+ P EG+ P AG E Y
Sbjct: 123 VGAYVYISSGAAYG-AERTPKREGET--PLAGCTAEQATTDSAETYGPRKAEGDREVFAA 179
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E+ S RP + G + + ++ DR+ V +P G+ +A+V D++S L
Sbjct: 180 AEDGVQAMSVRPTVVYGPYDYTERFAYWVDRVAEYDRVVVPSDGLSLWQMAYVEDVASAL 239
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKA 189
L E A+ +N+ + A TL L A+ VE + + +AAG+ A
Sbjct: 240 RLVAER--GAAGEAYNVGDEHAPTLREWVDLLARVHETDVETIGVGERELRAAGL-APDD 296
Query: 190 FPFRNMHFYAEPRAAKDILGWRST---TNLPEDLKERFE 225
FP + A LGW ST T L + E E
Sbjct: 297 FPIYRDSPHLLSTAKLRNLGWSSTPHETALAVTVAEHLE 335
>gi|423316030|ref|ZP_17293935.1| hypothetical protein HMPREF9699_00506 [Bergeyella zoohelcum ATCC
43767]
gi|405585035|gb|EKB58875.1| hypothetical protein HMPREF9699_00506 [Bergeyella zoohelcum ATCC
43767]
Length = 331
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 26/218 (11%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-------WA 80
A+ +GVK+ ++ +S+ Y + P VE + KP + + + KY++E +++ +
Sbjct: 115 ARDTGVKRLVYAASSSTYGDSKSLPKVEDVIGKPLSPYA-ITKYVNELYADVFKRTYDFD 173
Query: 81 SFRPQYMIGSGNNKDCEEW-------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
+ +Y G +D + F +++ + I G G + ++ ++ M
Sbjct: 174 TIGLRYFNVFGRRQDPKGAYAAVIPKFVIQLMNHQSPTINGDGTYSRDFTYIDNVIQMNL 233
Query: 134 LA-VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
LA + E A + ++N T+ MA+L L + YDPK A ++ P
Sbjct: 234 LAMISENENAVNQVYNTAVGDRTTIKDMAEL------LKKYLSEYDPKIAEVEILHG-PN 286
Query: 193 RNM---HFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
R H A A+ LG++ T E LKE + Y
Sbjct: 287 RQGDVPHSLASIEKAQKNLGYQPTHKFAEGLKEAVDWY 324
>gi|408484411|ref|ZP_11190630.1| NAD-dependent epimerase/dehydratase [Pseudomonas sp. R81]
Length = 310
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 15/200 (7%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 76
NF V +GV + +F SSA Y E + D K +K SE +
Sbjct: 97 NFVGTLNVCQSMLKAGVTRVVFASSAATYGNNGEGTAIAEDTPKSPLTPYASDKLASEYY 156
Query: 77 SNW---------ASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI 122
++ FR + G S F +R + +P+ + G G Q +
Sbjct: 157 LDFYRREHGLEPVIFRFFNIFGPRQDPSSPYSGVISIFTERALAGKPITVFGDGEQTRDF 216
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
+V+DL S+L AVE E A I N+ R+ +L+ + A G + + + P+
Sbjct: 217 VYVQDLVSILVQAVETREPAPEAI-NVGLSRSTSLNDLIAELGNATGTALNVTYQAPRQG 275
Query: 183 GIDAKKAFPFRNMHFYAEPR 202
I +A R + +A P+
Sbjct: 276 DIRHSRANNTRLLERFALPQ 295
>gi|317476012|ref|ZP_07935266.1| NAD dependent epimerase/dehydratase [Bacteroides eggerthii
1_2_48FAA]
gi|316907842|gb|EFV29542.1| NAD dependent epimerase/dehydratase [Bacteroides eggerthii
1_2_48FAA]
Length = 314
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/227 (18%), Positives = 88/227 (38%), Gaps = 25/227 (11%)
Query: 9 KALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV 68
K ++ N + + D+AK +G K+F+F SS +Y E V D + V
Sbjct: 89 KPVYDLQTNTQSTLMLLDYAKRTGCKEFIFASSMSVYGD-HEISLVSEDTLAVPKSFYAV 147
Query: 69 EKYISENFS---------NWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPG 114
K SEN+ + R + G+G N D + +R+ + + G
Sbjct: 148 GKLASENYMRIYSSMYGIKCTALRFFNVYGAGQNMDNLKQGMASIYLALALREHHITVKG 207
Query: 115 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI 174
S +F + ++ D+ + + + ++N+ + + + + + + ++ LP +
Sbjct: 208 SKDRFRDFVYIDDIVDAVQKTMNRTKGELFEVYNVANCKKIHVHEIVDIIEKS--LPFTV 265
Query: 175 VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 221
H + + P M Y + + LGW + + E ++
Sbjct: 266 TH--------EYIEGTPGDQMGVYGKNDKIRKDLGWEAQVSFEEGMQ 304
>gi|161831561|ref|YP_001596603.1| NAD-dependent epimerase/dehydratase family protein [Coxiella
burnetii RSA 331]
gi|14600137|gb|AAK71260.1|AF387640_6 UDP-glucose-4-epimerase [Coxiella burnetii]
gi|161763428|gb|ABX79070.1| NAD-dependent epimerase/dehydratase family protein [Coxiella
burnetii RSA 331]
Length = 301
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 38/202 (18%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH--------VQV 68
N R+ V + + ++Q ++ISS +Y +D+P E V P + H + +
Sbjct: 85 NVRMMNVVCEVLQKQAIQQVIYISSDAVYADSDQPL-TETSVTAPTSLHGVMHLAREMML 143
Query: 69 EKYISENFSNWASFRPQYMIGS-------GNNKDCEEWFFDRIV-RKRPVPIPGSGMQFT 120
+ SEN + A RP + G+ G N+ F R+ + + G G +
Sbjct: 144 QSVCSENNISLAILRPSLLYGAEDPHNGYGPNR------FRRLADNHESIILFGEGEEQR 197
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
+ ++ D++ ++T ++ S + N+ + + ++ +A+ Q + V I P+
Sbjct: 198 DHVYIDDVAEIITRVIQR---CSRGVLNIATGQVISFKQLAEKVVQLSNNEVAI-QPSPR 253
Query: 181 AAGI-----------DAKKAFP 191
+ D +KAFP
Sbjct: 254 QGSMPHNGYRPFDITDCQKAFP 275
>gi|398891080|ref|ZP_10644520.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM55]
gi|398187315|gb|EJM74659.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM55]
Length = 309
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ LF SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIGTLNVCEAMRQAGVKRVLFASSAAVYGNNGEGESIDEDTPKSPLTPYAADKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
++ ++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 155 HYFDF--YRRQHALEPVIFRFFNIFGPRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHY 177
+ +V DL +L A+E P + N+ ++A TL M + G LP V Y
Sbjct: 213 TRDFVYVEDLVDLLVQAIEKPRVEVGAV-NVGWNQATTLKQMLEALEAVVGKLPP--VSY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|398901758|ref|ZP_10650549.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM50]
gi|398179369|gb|EJM66981.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM50]
Length = 309
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ L+ SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIGSLNVCEAMRQTGVKRVLYASSAAVYGNNGEGESIDEDTPKAPLTPYAADKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
++ ++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 155 HYFDF--YRRQHSLEPVIFRFFNIFGPRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM-AKLCAQAAGLPVEIVHY 177
+ +V DL +L A+E P+ + N+ ++A TL M A L A LP V Y
Sbjct: 213 TRDFVYVEDLVDVLVQAIEKPQVEVGAV-NVGWNQATTLKQMLAALEAVVGKLPP--VSY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|337270895|ref|YP_004614950.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum
WSM2075]
gi|336031205|gb|AEH90856.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum
WSM2075]
Length = 368
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 107 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 166
KRP+ I G Q + HVRD++ LA+E AA I N+ S R+ T+ +A+L A+
Sbjct: 235 KRPM-IFEDGNQKRDFVHVRDVARAFRLALEQRPAAGHAI-NIGSGRSYTISEVARLLAE 292
Query: 167 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 226
A G+P KA D + F A+ A+++LG+ + L L E F
Sbjct: 293 AMGVPKRPPEILGKARSGDIRNCF--------ADIAKARELLGFEPSHLLENSLGE-FAA 343
Query: 227 YVK--IGRDKKA-MQFEIDDKILES 248
+V+ + D+ A M+ E++++ L S
Sbjct: 344 WVRNSVAVDRGADMKRELEERGLVS 368
>gi|29654019|ref|NP_819711.1| NAD-dependent epimerase/dehydratase [Coxiella burnetii RSA 493]
gi|153207385|ref|ZP_01946122.1| NAD-dependent epimerase/dehydratase family protein [Coxiella
burnetii 'MSU Goat Q177']
gi|154707543|ref|YP_001424094.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii
Dugway 5J108-111]
gi|165918442|ref|ZP_02218528.1| NAD-dependent epimerase/dehydratase family protein [Coxiella
burnetii Q321]
gi|212212842|ref|YP_002303778.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii
CbuG_Q212]
gi|212219088|ref|YP_002305875.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii
CbuK_Q154]
gi|29541285|gb|AAO90225.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii RSA
493]
gi|120576694|gb|EAX33318.1| NAD-dependent epimerase/dehydratase family protein [Coxiella
burnetii 'MSU Goat Q177']
gi|154356829|gb|ABS78291.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii
Dugway 5J108-111]
gi|165917810|gb|EDR36414.1| NAD-dependent epimerase/dehydratase family protein [Coxiella
burnetii Q321]
gi|212011252|gb|ACJ18633.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii
CbuG_Q212]
gi|212013350|gb|ACJ20730.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii
CbuK_Q154]
Length = 301
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 38/202 (18%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH--------VQV 68
N R+ V + + ++Q ++ISS +Y +D+P E V P + H + +
Sbjct: 85 NVRMMNVVCEVLQKQAIQQVIYISSDAVYADSDQPL-TETSVTAPTSLHGVMHLAREMML 143
Query: 69 EKYISENFSNWASFRPQYMIGS-------GNNKDCEEWFFDRIV-RKRPVPIPGSGMQFT 120
+ SEN + A RP + G+ G N+ F R+ + + G G +
Sbjct: 144 QSVCSENNISLAILRPSLLYGAEDPHNGYGPNR------FRRLADNHESIILFGEGEEQR 197
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
+ ++ D++ ++T ++ S + N+ + + ++ +A+ Q + V I P+
Sbjct: 198 DHVYIDDVAEIITRVIQR---CSRGVLNIATGQVISFKQLAEKVVQLSNNEVAI-QPSPR 253
Query: 181 AAGI-----------DAKKAFP 191
+ D +KAFP
Sbjct: 254 QGSMPHNGYRPFDITDCQKAFP 275
>gi|398824945|ref|ZP_10583258.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. YR681]
gi|398224358|gb|EJN10667.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. YR681]
Length = 316
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 46/226 (20%)
Query: 31 SGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDAGHVQVEKYISENFS 77
+G ++ LF+ S+ IY K A +P P E + AG VE Y S+ S
Sbjct: 106 NGAEKLLFLGSSCIYPKLAPQPLREDSVLTGPLEPTNEPYAIAKIAGIKMVEAYRSQYGS 165
Query: 78 NWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIPGSGMQFTNIAHVRD 127
++ S P + G G+N E ++R+ + V + G+G +V D
Sbjct: 166 DFISVMPTNLYGPGDNYHPEMSHVVAALIRRFHEAKVSGAKNVVVWGTGTPRREFLYVDD 225
Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 187
++ ++ +SS + N+ + +T+ A++ A G EI
Sbjct: 226 MADACVHLMKT--YSSSELVNIGTGEDITIAEFARVVADIVGYSGEI------------- 270
Query: 188 KAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEYV 228
F PR D+ LGWR+TT+L + LK + Y+
Sbjct: 271 ---SFDTTRPDGTPRKLLDVSRLAQLGWRATTSLQDGLKRAYAAYL 313
>gi|358458704|ref|ZP_09168911.1| dTDP-glucose 4,6-dehydratase [Frankia sp. CN3]
gi|357078015|gb|EHI87467.1| dTDP-glucose 4,6-dehydratase [Frankia sp. CN3]
Length = 391
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R + P+ + G G QF +VRDL+ A+ P A ++ I ++R LD
Sbjct: 216 FVARALAGEPLTVAGDGRQFRRYVYVRDLADAHVRALTTPAAENATIALEGAERVSVLDM 275
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+ A G+ +E V P +R AE A +L WR TT +
Sbjct: 276 AEAVRAHFPGIEIEHVPARPG----------DYRGREVSAE--LAARLLDWRPTTTFRDG 323
Query: 220 LKERFEEYV 228
+++ E Y+
Sbjct: 324 VRQYIEWYL 332
>gi|333923614|ref|YP_004497194.1| dTDP-glucose 4,6-dehydratase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749175|gb|AEF94282.1| dTDP-glucose 4,6-dehydratase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 316
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 22/147 (14%)
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
RP + G G N DC F +++R R + G G Q+ + +V D+ L A
Sbjct: 171 LRPTLVYGPGQNDDC---FMSQLIRSLLSGRHFSMTG-GEQYRDFIYVSDVVEALWHAAN 226
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF 197
NP A IFN+ S ++ L +A++ A G P +++ A P+
Sbjct: 227 NPRALG-EIFNIGSGKSYPLREVARMIADFIGQPDDLLKIG----------ALPYNKEEQ 275
Query: 198 YA---EPRAAKDILGWRSTTNLPEDLK 221
+A + AK +L W+ L E +K
Sbjct: 276 FAYCVDINRAKQVLNWQPKIMLREGIK 302
>gi|423471431|ref|ZP_17448175.1| hypothetical protein IEM_02737 [Bacillus cereus BAG6O-2]
gi|402432177|gb|EJV64237.1| hypothetical protein IEM_02737 [Bacillus cereus BAG6O-2]
Length = 314
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 94/246 (38%), Gaps = 46/246 (18%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N +Q V D A SGV++ LF+ S IY +P E + G++ +
Sbjct: 83 DNLMIQTNVIDSAYRSGVEKLLFLGSTCIYPKLAPQPLKEEYLLTGELEPTNEPYALAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRP---------VPI 112
AG E Y + + + S P + G +N D ++RK V +
Sbjct: 143 AGIKMCESYNRQYGTKYISAMPTNLYGQNDNFDLHTSHVLPALIRKFHEAKENNAGFVEV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G + DL+ + N E + I N+ +++ +A+ G
Sbjct: 203 WGTGTPLREFLYSDDLADACVYLMNNYEG--NEIVNIGVGEDLSIKELAEKVKATVGFTG 260
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
E+ K G PR D+ LGW++TT+L E LK+ + +
Sbjct: 261 ELRFDTSKPDGT----------------PRKLVDVTKLNALGWKATTSLDEGLKKAYNWF 304
Query: 228 VKIGRD 233
++ ++
Sbjct: 305 LQTEKE 310
>gi|448690789|ref|ZP_21695950.1| UDP-glucose 4-epimerase [Haloarcula japonica DSM 6131]
gi|445776751|gb|EMA27728.1| UDP-glucose 4-epimerase [Haloarcula japonica DSM 6131]
Length = 317
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 36/210 (17%)
Query: 34 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGS--- 90
+ +F SSA +Y D+ P E +P++ + EKY+ E ++ + + QY + +
Sbjct: 122 TRVVFASSAAVYGTPDDVPIGEDAPTEPNSPY-GFEKYLGEQYARF--YTEQYGLPTVPL 178
Query: 91 ------------GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
G F + P+ + G G Q + HV D+ LA
Sbjct: 179 RYFNVYGPRGLDGEYAGVIGTFVRQAQAGEPLTVEGDGTQTRDFVHVDDIVRANLLA--- 235
Query: 139 PEAASSNI---FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 195
A + I FN+ + R+VT++ +A+ G+ + + H +A I +
Sbjct: 236 --ATTDTIGRPFNVGTGRSVTINELAETVRDVVGMDIAVKHVPGRANDIQQSE------- 286
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
A+ A+++LG+ T +L + L+ +
Sbjct: 287 ---ADLSDARELLGYEPTLSLQKGLEATLD 313
>gi|332558964|ref|ZP_08413286.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides WS8N]
gi|332276676|gb|EGJ21991.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides WS8N]
Length = 368
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
G Q + HVRD++ LA+E P+AA + N+ S A T+ G+A+L A+A G P
Sbjct: 243 GEQKRDFVHVRDVARAFRLALETPDAA-GEVINVGSGSAYTIAGVARLLAEAMGRP 297
>gi|224002687|ref|XP_002291015.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972791|gb|EED91122.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 355
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV---ENPEAASSNIFNLVSDRAVT 156
F D V + + I G G+ + +V+D++ + +A+ + E AS +++N+ + +++T
Sbjct: 225 FLDAAVNGKDITILGDGLMTRDFVYVKDVARAIVMALLQEKEAEDASFSVYNVCTGKSIT 284
Query: 157 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 191
++ +A+ + I H DP+ I P
Sbjct: 285 INTLAEQVKHSTESSSNITHLDPRDGDIRESSCNP 319
>gi|402821369|ref|ZP_10870911.1| NAD-dependent epimerase/dehydratase [Sphingomonas sp. LH128]
gi|402265096|gb|EJU14917.1| NAD-dependent epimerase/dehydratase [Sphingomonas sp. LH128]
Length = 316
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 43/247 (17%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV-------------VKPD 62
+N ++ V + ++ GV++ LF+ S+ IY E P EG + +
Sbjct: 87 DNLMIEANVIESSRQVGVEKLLFLGSSCIYPKFAEQPITEGALLTGPLEPTNEWYAIAKI 146
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRK---------RPVPI 112
AG + Y E ++ S P + G G+N D ++RK + I
Sbjct: 147 AGIKLCQAYRKEYGLDYISAMPTNLYGPGDNFDLTSSHVMPALIRKAHEAKRVGASSIEI 206
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G HV DL+ + ++N + N+ S VT+ + ++ +A G
Sbjct: 207 WGTGSPRREFLHVDDLADACIMLLKN--YSGHEHVNIGSGEDVTILELTEMVMKAIGFDG 264
Query: 173 EIVHYDPKAAGIDAK--KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
+I+ + K G K A R+M GWR + L E ++ ++ +++
Sbjct: 265 KIIKDETKPDGTPRKLMSADKLRSM-------------GWRPSIGLFEGIQSAYDWFLE- 310
Query: 231 GRDKKAM 237
+K AM
Sbjct: 311 --NKSAM 315
>gi|421277782|ref|ZP_15728597.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus mitis SPAR10]
gi|395873606|gb|EJG84697.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus mitis SPAR10]
Length = 326
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 98/241 (40%), Gaps = 46/241 (19%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V + + +G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 96 VLEACRQAGIQRLVYVSSPSIYAAPRDQLGIKESDAPEEN----NLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDL 128
RP+ + G G+ R++ +K +P+ G G Q ++ V ++
Sbjct: 152 KDYPDVPSIILRPRGLFGIGDTS-----ILPRVINLSQKLGIPLIGDGRQLMDMTCVENV 206
Query: 129 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAK 187
+ + LA+E PE A ++N+ + + + G P++ +GI +
Sbjct: 207 ALAIRLAIEAPE-AKGEVYNITNGEPRAFRDLLEESLTGLGYPIKYRKIPASLLSGIASS 265
Query: 188 KAFPFRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYV 228
F ++ ++ EP +A KD LG+ + E +++ ++Y
Sbjct: 266 LEFIYKTLNLKGEPPLTRYTYYLLRYSQTLDISKAEKD-LGYHPKIRISEGIEQYVQDYR 324
Query: 229 K 229
K
Sbjct: 325 K 325
>gi|386400376|ref|ZP_10085154.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. WSM1253]
gi|385741002|gb|EIG61198.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. WSM1253]
Length = 325
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 36/238 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N + V A +G ++ +F+ S+ IY K A +P P E +
Sbjct: 88 DNIAIAANVIHAAYLNGAEKLMFLGSSCIYPKLAPQPLREDTVLSGPLEPTNEPYAIAKI 147
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE----------WFFDRIVRKRPVPI 112
AG VE Y + S++ S P + G G+N E+ + ++ + V +
Sbjct: 148 AGIKMVEAYRRQFGSDFISVMPTNLYGPGDNYHPEQSHVVAALIRRFHEAKVAGAKSVAV 207
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G +V D++ ++ +S+ + N+ + +T+ A++ A+ G
Sbjct: 208 WGTGTPRREFLYVDDMADACVCLMKT--YSSAELINIGTGEDITIAEFARVVAEIVGYSG 265
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
EI + G K R AK LGWR+ T L + +++ +++++ +
Sbjct: 266 EIAFDSSRPDGTPRK---------LLDVSRLAK--LGWRARTRLTDGMRQTYQDFLAV 312
>gi|419719489|ref|ZP_14246767.1| NAD dependent epimerase/dehydratase domain protein
[Lachnoanaerobaculum saburreum F0468]
gi|383304352|gb|EIC95759.1| NAD dependent epimerase/dehydratase domain protein
[Lachnoanaerobaculum saburreum F0468]
Length = 343
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 31/246 (12%)
Query: 28 AKSSGVKQFLFISSAGIYK-PADEPPHVEGDV-VKPDAGHV----QVEKYISENFSNWAS 81
K +++F+S+ +Y P + P E D +P+ + + E+ E F++ ++
Sbjct: 88 VKQMHCARYIFVSTVDVYGYPLNRLPMRESDPWGEPNCLYAKNKKECEQIFKEGFADTST 147
Query: 82 ----FRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
RP Y +G S ++ + RI +PV +PG G + M+
Sbjct: 148 SLTIARPAYSMGKTFALSAFERNRGKHIVARIREGKPVYVPGDGNALLQTGSAYNTGLMI 207
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH--------YDPKAAGI 184
EN + + DR T D K A G+PV+IVH + K
Sbjct: 208 ARIAENDNCKDKD-YTCGHDRLNTQDEYIKAFANVLGMPVKIVHIPTDFMYSLERKEVED 266
Query: 185 DAKKAFPFRNMHFYAEPRAAK--DILGWRSTTNLPEDLKERFEEYV-KIGRDKKAMQFEI 241
K N++F + + D + W + ED F E+ KIG K ++ +
Sbjct: 267 SILKDLSIHNIYFSVDKFKQEFPDFV-WEYSM---EDAARAFIEHQDKIGTFDKPLEEQF 322
Query: 242 DDKILE 247
+DK+LE
Sbjct: 323 EDKVLE 328
>gi|299469656|emb|CBN76510.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 381
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 96/230 (41%), Gaps = 33/230 (14%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVE-- 69
T NN + + AK G+K+F+ +S+ +Y D+ P E +V++P + +
Sbjct: 121 TQNNIYGTHVLLESAKKVGIKRFVHVSTDEVYGEGEHDQEPMFEDNVLEPTNPYAATKAG 180
Query: 70 -KYISENFSNWASFRPQYMIGSGNN--------KDCEEWFFDRIVRKRPVPIPGSGMQFT 120
++I++ + + SF +I GNN + F ++++R + + I G+G
Sbjct: 181 AEFIAKAY--FRSFNLPVIITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGSNKR 238
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
N HV D+++ + +I+N+ ++ +A+ + LP E
Sbjct: 239 NFLHVADVATAFEKILH--AGVEGSIYNIGGTNEHSVLKVARDLMRIFELPSE------- 289
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKD-----ILGWRSTTNLPEDLKERFE 225
D KA F + + + R + LGW+ + LKE E
Sbjct: 290 ----DGDKATEFGDDRVFNDLRYTINSDKLAALGWKEEKTWEQGLKETVE 335
>gi|121700470|ref|XP_001268500.1| NAD dependent epimerase/dehydratase, putative [Aspergillus clavatus
NRRL 1]
gi|119396642|gb|EAW07074.1| NAD dependent epimerase/dehydratase, putative [Aspergillus clavatus
NRRL 1]
Length = 316
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G T++ HV D + + LA + +A ++FN S AVT +A AQ A LP+E +
Sbjct: 197 GAAHTSVVHVDDAAQLFLLAAQKAQAG--DVFNGGSSHAVTTRELATAIAQTADLPLESL 254
Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 210
YD + A F + A R A++ +GW
Sbjct: 255 PYDEVVSKTGEFMA-RFLSEENRASGRKAREQMGW 288
>gi|441216133|ref|ZP_20976849.1| UDP-glucose 4-epimerase, GalE5 [Mycobacterium smegmatis MKD8]
gi|440624566|gb|ELQ86427.1| UDP-glucose 4-epimerase, GalE5 [Mycobacterium smegmatis MKD8]
Length = 323
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 27/219 (12%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV--VKPDAGHVQVEKYISE 74
N L V A GV + +++SS+ +++ A + P E + +P K E
Sbjct: 92 NTGLYNSVFGAALREGVDRLVYVSSSMVFEHATQFPTPEEHLPDCRPPRSAYGFSKLTGE 151
Query: 75 NFSN---------WASFRPQYMIGSGNNKDCEEWFFDRI---VRK-----RPVPIPGSGM 117
+ + RP G G D E + +RK RP+ I GSG
Sbjct: 152 MYCRALHEEHGLPFTICRPFNAYGPGELPDTEPGIAHAVPDLIRKALSGQRPLQIFGSGR 211
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 177
Q + +V D++ + A+ +P AA + FN+ + T+ +A+L A GL
Sbjct: 212 QTRTLTYVDDIADGIVTAMFHP-AAENQDFNISASEERTVAEIAQLIWAACGL------- 263
Query: 178 DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL 216
DP ++ F + AK++LGW+++ +L
Sbjct: 264 DPDDFELERVPTFDVDVQRRWPSVVKAKELLGWQASVDL 302
>gi|359787666|ref|ZP_09290669.1| NAD-dependent epimerase/dehydratase [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359256538|gb|EHK59367.1| NAD-dependent epimerase/dehydratase [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 368
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R+ +P I G Q + HV+D++ LA+E P+ A ++ N+ S +A +
Sbjct: 227 FASRLANSQPPMIFEDGRQRRDFVHVKDVARAFRLALEQPQ-ARGHVINVGSGQAYAISE 285
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A L A+A G+P P+ G ++ RN +A+ A+++LG+ L
Sbjct: 286 VAALLAEAMGVP----EIKPEILG--KARSGDIRNC--FADISKARELLGFAPQFQLENS 337
Query: 220 LKERFE 225
L E E
Sbjct: 338 LGELAE 343
>gi|13540890|ref|NP_110578.1| UDP-glucose 4-epimerase [Thermoplasma volcanium GSS1]
gi|14324272|dbj|BAB59200.1| NDP-sugar epimerase [Thermoplasma volcanium GSS1]
Length = 312
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 13/164 (7%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEG-----DVVKPDAGHVQVEKYISENFS- 77
V + + S +K LF SS+ +Y A P E + A + E +IS S
Sbjct: 101 VLEMMRKSDIKDILFASSSTVYGEAKVIPTPENYGPLLPISSYGASKLAAEAFISAYASY 160
Query: 78 ---NWASFRPQYMIGSGNNKDCEEWFFDRIVR-KRPVPIPGSGMQFTNIAHVRDLSSMLT 133
N FR ++G + F +++ K+ + + G G Q + HV DL +
Sbjct: 161 YGFNALLFRFANVVGKNSTHGVIFDFINKLKNNKKELEVLGDGTQAKSYIHVEDLIGSMI 220
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVH 176
E+ + FNL +D ++D +AK +A GL IVH
Sbjct: 221 YVYEHVKGVEP--FNLGNDDVTSVDKIAKFVLEAMGLKDTAIVH 262
>gi|435848574|ref|YP_007310824.1| UDP-glucose 4-epimerase [Natronococcus occultus SP4]
gi|433674842|gb|AGB39034.1| UDP-glucose 4-epimerase [Natronococcus occultus SP4]
Length = 310
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F ++ P+ + G G Q + HV D+ LA S FN+ + +VT+
Sbjct: 195 FLEQARSGDPITVDGDGTQTRDFVHVSDVVQANLLAATTDAVGES--FNVGTGSSVTIRE 252
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 189
+A+ G EIVH DP+ ID +A
Sbjct: 253 LAETIRTVVGSDAEIVHGDPRPGDIDRSRA 282
>gi|408822607|ref|ZP_11207497.1| UDP-glucuronic acid epimerase [Pseudomonas geniculata N1]
Length = 321
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 77/207 (37%), Gaps = 22/207 (10%)
Query: 26 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV---------KPDAGHVQVEKYISENF 76
+ + GV+ ++ SS+ +Y + PP E V A + Y
Sbjct: 110 ELCRHRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMAYTYAQLYG 169
Query: 77 SNWASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
+ R + G D F R ++ RP+ + G + HV D+ S + A
Sbjct: 170 LHATGLRFFTVYGPWGRPDMAPLLFSRAVLAGRPIDVFNEGRMQRDFTHVSDIVSGILGA 229
Query: 136 VENPE--AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
+ +P +FNL + V L+ + QAAG P + V+ K P
Sbjct: 230 LAHPADGPVPHRVFNLGNHTPVELERFISVIEQAAGCPAQKVY----------KPMQPGD 279
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDL 220
+ A+ R A D G+ + T + E L
Sbjct: 280 MVRTMADTRRAHDAFGFDAVTPIEEGL 306
>gi|409439887|ref|ZP_11266919.1| putative NDP-glucose dehydratase epimerase protein [Rhizobium
mesoamericanum STM3625]
gi|408748437|emb|CCM78100.1| putative NDP-glucose dehydratase epimerase protein [Rhizobium
mesoamericanum STM3625]
Length = 368
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R+ +P I G Q + HV D++ LAVE P+ A+ ++ N+ S A +
Sbjct: 227 FASRLANGQPPTIFEDGRQQRDFVHVLDVAHAFRLAVECPQ-ATGHVINVGSGSAYQIAE 285
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A L A+A GL PK G ++ RN +A+ A+++LG+ L
Sbjct: 286 VATLLAEAMGLS----GIRPKITG--TVRSGDIRNC--FADISKARELLGFEPQHRLENT 337
Query: 220 LKERFEEYVK----IGRDKKAMQFEIDDKILES 248
L F E+V+ I R+ + MQ +++++ L S
Sbjct: 338 LSA-FVEWVRSSNAIDRNAE-MQRQLEERGLVS 368
>gi|291336874|gb|ADD96405.1| UDP glucose 4 epimerase putative [uncultured organism
MedDCM-OCT-S09-C234]
Length = 392
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F ++I+ P+ I G+G Q ++ ++ D++ + ++ E PEA F + SD+ T++
Sbjct: 199 FMNQIMHNEPITIFGNGEQQSSFTYIDDVAPFIAISPEVPEAKQQGFF-VGSDKYYTINE 257
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDA 186
+AK A+A + H + + +DA
Sbjct: 258 VAKQTAKAMSSQFRVNHLEARKEVVDA 284
>gi|392304472|emb|CCI70835.1| UDP-glucose 4-epimerase [Paenibacillus polymyxa M1]
Length = 344
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYISENFS----NW 79
+ +GV + +F S++G+Y + E D V+P +G+ + E YI + N+
Sbjct: 138 CREAGVSKIIFASTSGVYGELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFYRLYGLNY 197
Query: 80 ASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
R + G G E F DR+ + P+ I G G Q + +V+D+ A
Sbjct: 198 TILRYGNVYGPGQAAKGEGGVVAIFMDRLKKGSPLLIHGDGTQTRDFVYVKDVVRANMAA 257
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM 195
+ AA ++ + R +++ +A + G V V Y P G ++
Sbjct: 258 I---HAADQRTVHVSTGRTTSINRLAYDLLKLHGSSVRPV-YSPARTG----------DI 303
Query: 196 HFYAEPRA-AKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAM 237
H A A+ L W + LKE + +G DK+ +
Sbjct: 304 HHSCLSNAVARHWLHWEPLYGISAGLKETYVS--SMGTDKEGI 344
>gi|289549231|ref|YP_003474219.1| dTDP-glucose 4,6-dehydratase [Thermocrinis albus DSM 14484]
gi|289182848|gb|ADC90092.1| dTDP-glucose 4,6-dehydratase [Thermocrinis albus DSM 14484]
Length = 318
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 25/217 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
+ D AK GVK F+ IS+ +Y + DE E +KP++ + V K S + A F
Sbjct: 104 LLDTAKKYGVKSFINISTDEVYGELGDEGSFKEDSCLKPNSPY-SVSK-ASADMLGRAYF 161
Query: 83 R----PQYMIGSGNNKDCEEW-------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
R P + NN ++ + ++ P+PI G G+ +V D +
Sbjct: 162 RTYGLPVITVRPSNNYGPWQYPEKLIPVVIVKAIKNEPIPIYGRGLNVREWLYVSDCAEA 221
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 191
+ ++ E I+N+ S +AKL G P +++ + G D + +
Sbjct: 222 VLEIIKKGEPG--EIYNVGSGEERRNIEVAKLILSILGKPEDLISFVQDRPGHDYRYSL- 278
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
+ + LGW++ T L E ++ E Y+
Sbjct: 279 --------DVSGTWEKLGWKAKTKLEEGIRRTVEWYL 307
>gi|126462933|ref|YP_001044047.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC
17029]
gi|126104597|gb|ABN77275.1| NAD-dependent epimerase/dehydratase [Rhodobacter sphaeroides ATCC
17029]
Length = 368
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
G Q + HVRD++ LA+E P+AA + N+ S A T+ G+A+L A+A G P
Sbjct: 243 GEQKRDFVHVRDVACAFRLALETPDAA-GEVINVGSGAAYTIAGVARLLAEAMGRP 297
>gi|390443792|ref|ZP_10231578.1| NAD-dependent epimerase/dehydratase [Nitritalea halalkaliphila LW7]
gi|389665822|gb|EIM77283.1| NAD-dependent epimerase/dehydratase [Nitritalea halalkaliphila LW7]
Length = 318
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 94/240 (39%), Gaps = 46/240 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N ++Q + D + S V++F+F+ S+ IY K A +P P E + +
Sbjct: 86 NMQIQNNLIDASLKSDVEKFIFLGSSCIYPKLAPQPLKEEYLLTSSLEPTNEWYALAKIS 145
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G E + ++ S P + G +N D E ++RK PV +
Sbjct: 146 GVKACEAIRKQYGKDFISLMPTNLYGPFDNFDLETSHVLPAMMRKFHEAKENGHAPVTLW 205
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
GSG HV D++ A+E E N++N+ + VT+ +A L Q G
Sbjct: 206 GSGTPMREFLHVDDMAEATVFAME--ERFDDNLYNVGTGTDVTIKELALLIQQIVGHEGR 263
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEYV 228
+V K G PR D+ GW++ +L ++E ++ ++
Sbjct: 264 LVWDASKPDGT----------------PRKLMDVSKLAARGWKAKIDLETGIRETYDWFL 307
>gi|406985973|gb|EKE06663.1| hypothetical protein ACD_18C00306G0001 [uncultured bacterium]
Length = 318
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 93/241 (38%), Gaps = 40/241 (16%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPDA 63
N ++Q V A SGVK+ LF+ S+ IY +P E + G + + A
Sbjct: 84 NLQIQNNVIHNAYLSGVKKLLFLGSSCIYPRECPQPMKEEYLLTGLLEATNEPYAIAKIA 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRP---------VPIP 113
G + Y + +N+ + P + G +N D E F VRK V +
Sbjct: 144 GIKMCQSYNRQYGTNFIAVMPTNLYGENDNFDLETSHLFAAFVRKFSEAKKNNLPKVNVW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVEN-----PEAASSNIF-NLVSDRAVTLDGMAKLCAQA 167
G+G+ HV D++S + N + + IF NL + +++ + + Q
Sbjct: 204 GTGVAKREFLHVDDMASGCLFLLNNFNPTKEQNETGEIFVNLGTGVDLSVKELVEHFKQV 263
Query: 168 AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
EI +D +K MH +GW+ T +L E +K E Y
Sbjct: 264 LDYQGEI-EWDSTKPDGTPQKLLDMTKMH----------EMGWKHTIDLDEGIKMTCEGY 312
Query: 228 V 228
+
Sbjct: 313 L 313
>gi|378953138|ref|YP_005210626.1| UDP-glucose 4-epimerase [Pseudomonas fluorescens F113]
gi|359763152|gb|AEV65231.1| UDP-glucose 4-epimerase [Pseudomonas fluorescens F113]
Length = 309
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + SGVK+ LF SSA +Y E ++ + K +K SE
Sbjct: 95 QSNFIGTLNVCEAMRQSGVKRVLFASSAAVYGNNGEGESIDEETPKAPLTPYASDKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKDCEE-------WFFDRIVRKRPVPIPGSGMQ 118
+ ++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 155 FYFDF--YRRQHDLEPVVFRFFNIYGPRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHY 177
+ +V DL +L A+E PE + N+ ++A TL M + A G LP + Y
Sbjct: 213 TRDFVYVEDLVDLLVQAIEKPEVEVGAV-NVGWNQATTLKQMLQALAAVVGDLPP--ISY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|240138623|ref|YP_002963095.1| UDP-glucose 4-epimerase [Methylobacterium extorquens AM1]
gi|240008592|gb|ACS39818.1| putative UDP-glucose 4-epimerase [Methylobacterium extorquens AM1]
Length = 307
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISS----AGIYKPADEPPHVEGDVVKP----DA 63
FR N+N R +AD A+ + V +F+F+SS AG PA P E D +P
Sbjct: 86 FR-NSNTEATRKLADAAQRARVGRFVFLSSIRAQAGSSAPA---PLSEADTPEPTDPYGR 141
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E+ ++E +W + RP + G+G + ++ R P P+P ++A
Sbjct: 142 SKLAAEEALAETGLDWVALRPVLVYGAGVKGNMAALL--KLART-PYPLP-----LASLA 193
Query: 124 HVRDLSSMLTLA 135
R L S+ +LA
Sbjct: 194 GRRSLVSVESLA 205
>gi|443669494|ref|ZP_21134708.1| rmlD substrate binding domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159029030|emb|CAO90016.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330221|gb|ELS44955.1| rmlD substrate binding domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 326
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 17/156 (10%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYI----SENFSNWA 80
+GVK F+F+SS I+ A E + E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDDILNENSPCHPDSPYGRSKLQAEQALIQLAKDSNMTWT 164
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENP 139
RP + G GN + E +++ KR +P+P G+ + V +L + + +++P
Sbjct: 165 ILRPTLVYGLGNRANMERLM--KLI-KRGLPLPFGAVKNRRSFVFVGNLVAAIITCLDHP 221
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
AA + IF + ++AV+ + +L AQ P +++
Sbjct: 222 NAA-NQIFLISDNQAVSTPQLIRLIAQQIQQPCQLL 256
>gi|423296286|ref|ZP_17274371.1| hypothetical protein HMPREF1070_03036 [Bacteroides ovatus
CL03T12C18]
gi|392670896|gb|EIY64374.1| hypothetical protein HMPREF1070_03036 [Bacteroides ovatus
CL03T12C18]
Length = 335
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 19/161 (11%)
Query: 33 VKQFLFISSAGIY-KPADE----------PPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+Q++FISSA Y KP + P+ + K +A V + Y + F
Sbjct: 88 TRQYIFISSASAYQKPLTDYRITESTPLVNPYWQYSRNKIEAEEVLMSAYRTSGFPV-TI 146
Query: 82 FRPQYMIGSGN-----NKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
RP + + D W RI+ +PV IPG G + H +D +
Sbjct: 147 VRPSHTYNGTKPPVAVHGDKGNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGL 206
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ NP A N F++ D ++T + + + A A P+ +H
Sbjct: 207 MANPHAI-GNAFHITIDESMTWNQIYQTIADALDKPLNALH 246
>gi|374369315|ref|ZP_09627348.1| NAD-dependent epimerase/dehydratase family protein [Cupriavidus
basilensis OR16]
gi|373099136|gb|EHP40224.1| NAD-dependent epimerase/dehydratase family protein [Cupriavidus
basilensis OR16]
Length = 350
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 16/176 (9%)
Query: 68 VEKYISENFSNWASFRPQYMIGSGNNKDCEE---------WFFDRIVRKRPVPIPGSGMQ 118
+ Y E N+ FRP IG+G + E F IVR P+ + G Q
Sbjct: 160 IHAYGMEQGLNYTLFRPFNWIGAGLDSIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGAQ 219
Query: 119 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV-TLDGMAKLCAQAAGLPVEIVH 176
A V D + L +ENP A+ I+N+ + R + ++ +A++ + AG E
Sbjct: 220 KRAFADVTDGINALMRIIENPNGIATGKIYNIGNPRNIHSVRELAEMMLKMAGDYAEYAE 279
Query: 177 YDPKAAGIDAKKAFPFRNMHFYAEPRAAK-----DILGWRSTTNLPEDLKERFEEY 227
K ++ + + + R K + LGW+ + + L+ FE Y
Sbjct: 280 EAKKTQIVETSSGDFYGKGYQDVQNRVPKIDNTVEELGWKPEVTMEDALRAIFEAY 335
>gi|392422595|ref|YP_006459199.1| epimerase [Pseudomonas stutzeri CCUG 29243]
gi|390984783|gb|AFM34776.1| epimerase [Pseudomonas stutzeri CCUG 29243]
Length = 309
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 83
+ + + SGVK+ LF SSA +Y E ++ D K +K SE++ ++ +R
Sbjct: 103 LCEAMRESGVKRVLFASSAAVYGNNGEGHAIDEDTPKAPLTPYAADKLASEHYLDF--YR 160
Query: 84 PQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 127
Q+ + G +D F +R + P+ + G G Q + +V D
Sbjct: 161 RQHGLEPVVFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIAVFGDGEQTRDFLYVAD 220
Query: 128 LSSMLTLAVENPEAA----------SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
L +L A+E+PEA ++++ L++ L G+ K+ QAA P +I H
Sbjct: 221 LVEVLVQALESPEAVEGAVNVGLNQATSLNQLLAAIGDVLGGLPKVSYQAA-RPGDIRH 278
>gi|338213204|ref|YP_004657259.1| NmrA family protein [Runella slithyformis DSM 19594]
gi|336307025|gb|AEI50127.1| NmrA family protein [Runella slithyformis DSM 19594]
Length = 289
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 19/152 (12%)
Query: 22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
+P+ D AK +GV+ +F+S G VE + P H +EK I E+ +
Sbjct: 88 KPLIDTAKETGVQCIVFLSVQG----------VESSTLIP---HHTIEKLIVESGIPYVF 134
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
RP Y + + D +RKR + +P +FT I VRD+ + L + +
Sbjct: 135 LRPAYFMQNFTTTLLP----DLRLRKR-IFLPAGHAKFTLI-DVRDIGAAAALILTDSAK 188
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
+ L ++ +T MA +QA + ++
Sbjct: 189 HLYKAYELTNNEKLTFGEMAAALSQALDVTIQ 220
>gi|227538996|ref|ZP_03969045.1| GDP-L-fucose synthase [Sphingobacterium spiritivorum ATCC 33300]
gi|227241199|gb|EEI91214.1| GDP-L-fucose synthase [Sphingobacterium spiritivorum ATCC 33300]
Length = 320
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 40/237 (16%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N ++Q + D+A V++F+F+ S+ IY K A +P P E + A
Sbjct: 88 NLQIQNNLIDFAVKGNVEKFIFLGSSCIYPKFAAQPLTEDSLLTDTLEPTNEAYAIAKIA 147
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRK---------RPVPIP 113
G E + ++ S P + G +N D ++RK RPV +
Sbjct: 148 GVKACEAVRKQYGKDFVSLMPTNLYGVNDNFDLNSSHVLPAMIRKFHEAKLAGDRPVTLW 207
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
GSG V DL+ A+EN PE +++N+ + +++ +A + G
Sbjct: 208 GSGTPLREFLFVDDLAEATIFALENTLPE----HLYNVGTGEDLSIRDLAIAIQKIVGHK 263
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
EI+ +D + +K MH LGW+ L ++ ++ ++
Sbjct: 264 GEIL-WDSEKPDGTPRKLMDVSKMH----------ALGWKHRVELEAGIQTTYKWFL 309
>gi|330812025|ref|YP_004356487.1| NAD-dependent lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423699588|ref|ZP_17674078.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
fluorescens Q8r1-96]
gi|327380133|gb|AEA71483.1| putative NAD-dependent lipopolysaccharide biosynthesis-related
epimerase/dehydratase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387997043|gb|EIK58373.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
fluorescens Q8r1-96]
Length = 309
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + SGVK+ LF SSA +Y E ++ + K +K SE
Sbjct: 95 QSNFIGTLNVCEAMRQSGVKRVLFASSAAVYGNNGEGESIDEETPKAPLTPYASDKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKDCEE-------WFFDRIVRKRPVPIPGSGMQ 118
+ ++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 155 FYFDF--YRRQHDLEPVVFRFFNIYGPRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHY 177
+ +V DL +L A+E PE + N+ ++A TL M + A G LP + Y
Sbjct: 213 TRDFVYVEDLVDLLVQAIEKPEVEVGAV-NVGWNQATTLKQMLQALAAVVGDLPP--ISY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|242008565|ref|XP_002425073.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508738|gb|EEB12335.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 893
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 41/236 (17%)
Query: 27 WAKSSGVKQFLFISSAGIY---KPAD--EP--PHVEGDVVK--PDAG---HVQVEKYISE 74
+AK + F+ +S+ + KP D +P P E D K P + H Q+EK I+E
Sbjct: 136 FAKYQDCRTFILVSTLLTWAKTKPIDPDDPSLPFTERDFRKRKPHSNYKIHCQLEKRITE 195
Query: 75 NFSNWASFRPQYMIGSG----NNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLS 129
+ +IG+G + +D +F P +PI GSG + H+ LS
Sbjct: 196 LGKKYPKNFRTVVIGAGIPYGHEEDILHIYFKMAWLNSPHLPIFGSGKNILPVIHIDSLS 255
Query: 130 SMLTLAVEN-PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 188
S++ +++ PE S + + + +TL+ +AKL A+ G + K ++ ++
Sbjct: 256 SIIRNIIDDFPEKMSYIV--AMDPQTITLNEVAKLLAKNLG--------NGKVLKVNKEE 305
Query: 189 AFPFR------------NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR 232
AF + N++ Y K+ + W + E++K+ EEY KI R
Sbjct: 306 AFLYNEVEQKIFDMLTANINIYPNYIMNKENIVWGTDRPFNENIKKLIEEY-KIAR 360
>gi|258645455|ref|ZP_05732924.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470]
gi|260402806|gb|EEW96353.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470]
Length = 306
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 85/212 (40%), Gaps = 26/212 (12%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS------ 77
V + A+ + V++ +F SSA +Y P E + P + + + K+++E +
Sbjct: 99 VLEAARKTDVQKIIFSSSAAVYGDNPALPLTENLIPAPSSFY-GLTKWMTEKYLALYHKI 157
Query: 78 ---NWASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
++ R + G D E F + +P+ I G G Q + V D+ S
Sbjct: 158 YELSYTVLRYSNVYGPRQGADGEGGVIYIFAKSLAENKPITIFGDGRQTRDFISVHDVIS 217
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
A+ A I N+ ++ ++L+ +A AAG +++ Y P G +
Sbjct: 218 ANLAALHQ---ADGEIINVSTETELSLNDLASKMIAAAGCSEDLLRYGPPRTGDIYRSCL 274
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
+ AK +L W + N+ + L E
Sbjct: 275 ---------SNQKAKTLLHWTPSRNIKDGLTE 297
>gi|254561221|ref|YP_003068316.1| UDP-glucose 4-epimerase [Methylobacterium extorquens DM4]
gi|254268499|emb|CAX24456.1| putative UDP-glucose 4-epimerase [Methylobacterium extorquens DM4]
Length = 307
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISS----AGIYKPADEPPHVEGDVVKP----DA 63
FR N+N R +AD A+ + V +F+F+SS AG PA P E D +P
Sbjct: 86 FR-NSNTEATRKLADAAQRARVGRFVFLSSIRAQAGSSAPA---PLSEADAPEPTDPYGR 141
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E+ ++E +W + RP + G+G + ++ R P P+P ++A
Sbjct: 142 SKLAAEEALAETGLDWVALRPVLVYGAGVKGNMAALL--KLART-PYPLP-----LASLA 193
Query: 124 HVRDLSSMLTLA 135
R L S+ +LA
Sbjct: 194 GRRSLVSVESLA 205
>gi|189499362|ref|YP_001958832.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeobacteroides
BS1]
gi|189494803|gb|ACE03351.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeobacteroides
BS1]
Length = 677
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK 70
LF TN + R + + +GV + +FISS +Y A P E KP+ + + K
Sbjct: 454 LFLTNTDG--TRALLEAMHDAGVGKLIFISSQSVYGTARTPLWKEEMPAKPETPYA-LSK 510
Query: 71 YISENFSNWASFR-PQYMI-------GSGNNKDCEEW---FFDRIVRKRPVPIPGSGMQF 119
+I E S ++ PQ +I G G+ +E F +KR +P+ GS +
Sbjct: 511 WIGELLSLSENYSIPQVIILRVARIYGLGHFVRWDELPHKFALNAAKKRALPLFGSKNRI 570
Query: 120 TNIAHVRDLSSML--TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA---GLPVEI 174
++ HV D + + + PE S I N+ S V++ A +C A+ GLP
Sbjct: 571 -DLLHVNDAARAVRASCCTSFPE-TSKIILNIGSGTPVSISDFASICQAASRNCGLPAPP 628
Query: 175 VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
+ + +A P +++ + R AK+ LGW +L ++E
Sbjct: 629 IEQNQN------DEASP---LYWGMDIRKAKESLGWVPRHSLQSGMEE 667
>gi|434406084|ref|YP_007148969.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
gi|428260339|gb|AFZ26289.1| nucleoside-diphosphate-sugar epimerase [Cylindrospermum stagnale
PCC 7417]
Length = 318
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 14 TNNNFRLQRPVADWAK-SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQV 68
T N + + + AK + +K+ +F S++ +Y A+ P E KP + + +
Sbjct: 99 TERNINATQVLLEAAKDAKHLKRLVFASTSSVYGDAETLPTYEQICPKPISPYGITKLAA 158
Query: 69 EKYISENFSNWA----SFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIA 123
E+ + N+ + R + G D FF +++ + I G G+Q +
Sbjct: 159 ERLCGLYYKNFGVPFVALRYFTVYGPRQRPDMAFHKFFKSVLQDEAILIYGDGLQTRDFT 218
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 183
++D + A PEA IFN+ V L + + G P+ H + KA G
Sbjct: 219 FIKDAVAANLAAATVPEAV-GEIFNIGGGSRVVLTEVLNTMEEIIGKPITRNHIE-KAMG 276
Query: 184 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
DA+ H A+ A+ ILG++ +L E L + ++
Sbjct: 277 -DAR--------HTAADVSKAQKILGYKPQVSLKEGLTQEWQ 309
>gi|331002757|ref|ZP_08326272.1| hypothetical protein HMPREF0491_01134 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330407170|gb|EGG86674.1| hypothetical protein HMPREF0491_01134 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 343
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 31/246 (12%)
Query: 28 AKSSGVKQFLFISSAGIYK-PADEPPHVEGDV-VKPDAGHV----QVEKYISENFSNWAS 81
K +++F+S+ +Y P + P E D +P+ + + E+ E F++ ++
Sbjct: 88 VKQMRCARYIFVSTVDVYGYPLNRLPMRESDPWGEPNCLYAKNKKECEQIFKEGFADTST 147
Query: 82 ----FRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
RP Y +G S ++ + RI +PV +PG G + M+
Sbjct: 148 SLTIARPAYSMGKTFALSAFERNRGKHIVARIREGKPVYVPGDGNALLQTGSAYNTGLMI 207
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH--------YDPKAAGI 184
EN + + DR T D K A G+PV+IVH + K
Sbjct: 208 ARIAENDNCKDQD-YTCGHDRLNTQDEYIKAFANVLGMPVKIVHIPTDFMYSLERKEVED 266
Query: 185 DAKKAFPFRNMHFYAEPRAAK--DILGWRSTTNLPEDLKERFEEYV-KIGRDKKAMQFEI 241
K N++F + + D + W + ED F E+ KIG K ++ +
Sbjct: 267 SILKDLSIHNIYFSVDKFKQEFPDFV-WEYSM---EDAARAFIEHQDKIGTFDKPLEEQF 322
Query: 242 DDKILE 247
+DK+LE
Sbjct: 323 EDKVLE 328
>gi|116327881|ref|YP_797601.1| nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116330764|ref|YP_800482.1| nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116120625|gb|ABJ78668.1| Nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116124453|gb|ABJ75724.1| Nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 318
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 96/241 (39%), Gaps = 38/241 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D VK+ LF+ S+ IY +P DE ++G + +
Sbjct: 83 SNLQIQNNIIDACYRFKVKKLLFLGSSCIYPKFAKQPMDEGQLLDGKLEPTNEPYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F++ ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFYEAKIKDLPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVEN----PEAASSNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D++ ++N +A N+ S +++ +A+ +
Sbjct: 203 WGTGKPLREFLYSDDMARACVFLMKNYDVTGDAKGGEHVNVGSGIEISIRELAETVKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
G ++ +D +K +H +GW+ L E ++ FE+++
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWKHQVELKEGIRLAFEDFL 311
Query: 229 K 229
+
Sbjct: 312 R 312
>gi|384221122|ref|YP_005612288.1| GDP-fucose synthetase [Bradyrhizobium japonicum USDA 6]
gi|354960021|dbj|BAL12700.1| GDP-fucose synthetase [Bradyrhizobium japonicum USDA 6]
Length = 313
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 46/241 (19%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N + V A +G ++ +F+ S+ IY K A +P P E +
Sbjct: 88 DNIAIAANVIQAAHQNGAEKLMFLGSSCIYPKLAPQPLREDSVLTGPLEPTNEPYAIAKI 147
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE----------EWFFDRIVRKRPVPI 112
AG E Y S+ S++ S P + G G+N E + ++ + V +
Sbjct: 148 AGIKMAEAYRSQYGSDFISVMPTNLYGPGDNYHPELSHVVAALIRRFHEAKVAGAKSVIV 207
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G +V D++ ++ +S+ + N+ + +T+ A++ A G
Sbjct: 208 WGTGTPRREFLYVDDMADACVHLMKT--YSSAELVNIGTGEDITIAEFARVVAAIVGYGG 265
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
EI G D + PR D+ LGWR+TT+L + ++ +E Y
Sbjct: 266 EI--------GFDTSRPD--------GTPRKLLDVSRLAKLGWRATTSLEDGVRRAYEAY 309
Query: 228 V 228
+
Sbjct: 310 L 310
>gi|423013033|ref|ZP_17003754.1| GDP-L-fucose synthase [Achromobacter xylosoxidans AXX-A]
gi|338784021|gb|EGP48369.1| GDP-L-fucose synthase [Achromobacter xylosoxidans AXX-A]
Length = 317
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 36/236 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPDA 63
N +Q V A ++GV++ LF+ S+ IY +P E + G + + A
Sbjct: 85 NLMIQCNVIRAAYAAGVRKLLFLGSSCIYPREAPQPLREDALLTGPLEATNEPYAIAKIA 144
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G E Y E +++ P + G +N D ++RK V +
Sbjct: 145 GLKLCEAYQREYGAHFVCAMPTNLYGPHDNYDLHSSHVLPALIRKFHEGREAGDDSVTLW 204
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
GSG +V DL+ + +E P A ++N+ + + +++ +A++ AQ G
Sbjct: 205 GSGKPLREFLYVDDLARACVMLMETPTA--EGMYNIGAGQDLSIAELARVVAQVVGYQGN 262
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
IV+ K G R + + RA LGW+ +L + + +++
Sbjct: 263 IVYDASKPDGTP-------RKLMDSSRVRA----LGWKPEISLTHGVTLAYGHFLR 307
>gi|83944924|ref|ZP_00957290.1| hypothetical protein OA2633_09854 [Oceanicaulis sp. HTCC2633]
gi|83851706|gb|EAP89561.1| hypothetical protein OA2633_09854 [Oceanicaulis sp. HTCC2633]
Length = 282
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G F+ I HV D++ ++LA+ PE S FNL D T + AQ AGLP
Sbjct: 175 GHVFSRI-HVDDIARAVSLAIARPEV--SGAFNLSDDWPDTQPHVMTGAAQIAGLP---- 227
Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPR-----AAKDILGWR 211
P+ D KA P + FYAE R AK LGWR
Sbjct: 228 --GPRIEPFDPDKASPMQ-ASFYAECRRVSNARAKAALGWR 265
>gi|409730170|ref|ZP_11271760.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|448722601|ref|ZP_21705134.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
gi|445789026|gb|EMA39719.1| NAD-dependent epimerase/dehydratase [Halococcus hamelinensis 100A6]
Length = 325
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
N S RP + G + + ++ DR+ V +PG G ++ V D++S L E
Sbjct: 150 NAMSVRPPVVYGPHDYTERFGYWVDRVANHDRVVVPGDGDGLRHMVFVEDVASALVRVAE 209
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--AAGIDAKKAFPFRNM 195
+ ++ S +N+ R L+ L A A VE+V + + AA A + FP
Sbjct: 210 HGDSGES--YNVGDRRLPILEEWVGLVADALDTEVEVVTANARELAAADLAPEDFPLHLD 267
Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKER----FEEYVKIGRDK 234
+ + A LGW +T ED +R F E + GR+
Sbjct: 268 YPHVLSTAKLAALGWEATP--IEDALDRTVRAFRESERTGREN 308
>gi|315612318|ref|ZP_07887231.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus
sanguinis ATCC 49296]
gi|315315299|gb|EFU63338.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus
sanguinis ATCC 49296]
Length = 326
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 98/238 (41%), Gaps = 40/238 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V D + +G+++ +++SS IY P D+ E + + + YI ++ F
Sbjct: 96 VLDACREAGIQRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ ++ +K +P+ G G Q ++ V +++
Sbjct: 152 KDYPDVPSIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAF 190
+ LA+E+P+ AS ++N+ + + + + G P+ P + I F
Sbjct: 210 IRLALESPQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPAPLLSVIATSLEF 268
Query: 191 PFRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 229
++ + EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 269 LYKVLKLKGEPPLTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|258514597|ref|YP_003190819.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans
DSM 771]
gi|257778302|gb|ACV62196.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans
DSM 771]
Length = 301
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 20/127 (15%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF 76
N R + + A++SGV QFL +S+ G D P V K Q E+++ +
Sbjct: 86 NVEGTRNLVEAAENSGVSQFLHLSALG---ACDNP------VYKYAYSKWQGEEFVKNSK 136
Query: 77 SNWASFRPQYMIGSGNNKDCEEWFFDRI---VRKRP--VPIPGSGMQFTNIAHVRDLSSM 131
NW RP + G G F DR+ V P VP+PG G V DL +
Sbjct: 137 LNWVILRPSVIYGEGFG------FMDRMLQSVNMTPPWVPVPGRGKTLFQPISVHDLVNC 190
Query: 132 LTLAVEN 138
+ A+ N
Sbjct: 191 IIKALIN 197
>gi|126178155|ref|YP_001046120.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1]
gi|125860949|gb|ABN56138.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1]
Length = 333
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 24/214 (11%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYI---SENFS-NW 79
++ SGVK+ + SS+ +Y + P E +P + E+Y SE +
Sbjct: 134 SRDSGVKKIINASSSSVYGTVEYLPFDEDHPRRPVSPYGVSKLAAEEYCRVFSELYGLKS 193
Query: 80 ASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
S R + G D F R + P+ I G G + + +++D+ +A++
Sbjct: 194 VSLRYFTVYGPRMRPDLAISIFTRKALANEPITIFGDGTKTRDFTNIKDIVRANLIAMQK 253
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 198
E A +N+ V++ +A+ + G EI + D DA+ H +
Sbjct: 254 GEGA----YNIGGGHRVSIQTLAETIIETTGSSSEIRYADTVKG--DAE--------HTF 299
Query: 199 AEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR 232
A+ + A+ LGWR +L E L+ R+ +V R
Sbjct: 300 ADTKKAERNLGWRPQVSLEEGLR-RYAAWVSNSR 332
>gi|406662109|ref|ZP_11070214.1| GDP-L-fucose synthase [Cecembia lonarensis LW9]
gi|405553991|gb|EKB49134.1| GDP-L-fucose synthase [Cecembia lonarensis LW9]
Length = 325
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 47/256 (18%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N ++Q + D A S V++F+F+ S+ IY K A +P P E + A
Sbjct: 82 NLQIQNNLIDAALQSAVQKFIFLGSSCIYPKMAPQPLREEYLLTGSLEPTNEWYAIAKIA 141
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW---------FFDRIVRKR------ 108
G E + ++ S P + G +N D F + +V ++
Sbjct: 142 GVKACEAIRKQYGKDFVSLMPTNLYGPFDNFDLHTSHVLPAMIRKFHEAMVNEKRTAVSE 201
Query: 109 PVPIPGSGMQFTNIAHVRDLSSMLTLAVEN--PEAASSNIFNLVSDRAVTLDGMAKLCAQ 166
PV + GSG HV DL+ + A+EN PE +++N+ +++ +A L
Sbjct: 202 PVELWGSGTPMREFLHVDDLAEAVCFALENRLPE----HLYNVGFGSDISIKELASLIQN 257
Query: 167 AAGLPVEIVHYD-PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
+I H+D K G K + M LGW+ + +L E + + ++
Sbjct: 258 IVSHKGQI-HWDASKPDGTPRKWMDSSKLMK-----------LGWKPSIDLEEGITKTYK 305
Query: 226 EYVKIGRDKKAMQFEI 241
+++ ++ K ++ E+
Sbjct: 306 WFLEHQKEVKEVRIEV 321
>gi|19553125|ref|NP_601127.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 13032]
gi|62390761|ref|YP_226163.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 13032]
gi|21903430|sp|Q45291.2|GALE_CORGL RecName: Full=UDP-glucose 4-epimerase; AltName:
Full=Galactowaldenase; AltName: Full=UDP-galactose
4-epimerase
gi|21324691|dbj|BAB99314.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 13032]
gi|41326099|emb|CAF20262.1| UDP-GLUCOSE 4-EPIMERASE [Corynebacterium glutamicum ATCC 13032]
gi|385144027|emb|CCH25066.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum K051]
Length = 329
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 86/222 (38%), Gaps = 39/222 (17%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
++N + D ++ GV +F S+A Y D P E +P + + I
Sbjct: 89 HDNVVTALTLLDAMRAHGVNNLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDY 148
Query: 75 NFSNWA--------SFRPQYMIGS----GNNKDCEEWFFDRIV------RKRPV------ 110
+++A S R + G+ G N++ E ++ R++
Sbjct: 149 AITSYAAAFGLAATSLRYFNVAGAYGNIGENREVETHLIPLVLQVATGHREKTFMFGDDW 208
Query: 111 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG- 169
P P G + H+ DL+ LA+E+ EA IFNL S ++ + ++C + G
Sbjct: 209 PTP-DGTAVRDYIHILDLAKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGH 267
Query: 170 -LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 210
+P E+ P+ AG A A AK LGW
Sbjct: 268 PIPAEVA---PRRAGDPAT---------LIASSEKAKQELGW 297
>gi|374371818|ref|ZP_09629745.1| GDP-fucose synthetase [Cupriavidus basilensis OR16]
gi|373096648|gb|EHP37842.1| GDP-fucose synthetase [Cupriavidus basilensis OR16]
Length = 320
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 92/243 (37%), Gaps = 41/243 (16%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N ++ V A SGV+ LF+ S+ IY K A++P P E + A
Sbjct: 84 NLMIEANVVHAAHVSGVQALLFLGSSCIYPKHAEQPMREDALLTGLLEPTNEPYAIAKIA 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G E Y + ++ P + G +N E ++R+ V I
Sbjct: 144 GIKLCESYNRQYGRDYRCVMPTNLYGPLDNFHSENSHVIPALIRRFHEAKQRGATEVVIW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAA-SSNI------FNLVSDRAVTLDGMAKLCAQ 166
GSG HV D+++ +E P AA SN N+ + T+ +A+ A+
Sbjct: 204 GSGNSMREFLHVDDMAAASVHVMELPSAAYQSNTQPMLSHINVGTGIDCTIRELAETIAK 263
Query: 167 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 226
G +V +D +K R M LGW ST L E L++ +
Sbjct: 264 VTGFRGRLV-FDVNKPEGSPRKLMDVRRM----------KALGWTSTIELEEGLRDAYTW 312
Query: 227 YVK 229
YV+
Sbjct: 313 YVE 315
>gi|410720963|ref|ZP_11360311.1| nucleoside-diphosphate-sugar epimerase [Methanobacterium sp.
Maddingley MBC34]
gi|410599970|gb|EKQ54508.1| nucleoside-diphosphate-sugar epimerase [Methanobacterium sp.
Maddingley MBC34]
Length = 311
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 24/224 (10%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS 73
T NN + + ++ K +K+F++ SS+ +Y +D P + E V+KP + + V K +
Sbjct: 95 TKNNIEATQILLEFYKEQNIKKFIYSSSSSVYGDSDLPMN-ENSVLKPVSPY-GVTKLAA 152
Query: 74 EN--FSNW-------ASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIA 123
E+ + W S R + G D F ++ K + + G G Q +
Sbjct: 153 EHLCYLYWKNYNVPTVSLRYFTVYGPRQRPDMAINIFVKSVISKDNLKVFGDGEQTRDFT 212
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 183
++ D+ L L+ E + IFN+ ++++ + K +G +I Y K G
Sbjct: 213 YINDVVEALILSAE--KDVKGEIFNVGGGSRISVNNLIKEIENISGNKTKI-QYFGKVKG 269
Query: 184 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
A A+ R ILGW+ N+ LK Y
Sbjct: 270 DVRDTA---------ADLRKINKILGWQPKINIVNGLKTYISWY 304
>gi|359726280|ref|ZP_09264976.1| nucleoside-diphosphate-sugar epimerase [Leptospira weilii str.
2006001855]
Length = 316
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 95/241 (39%), Gaps = 38/241 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D VK+ +F+ S+ IY +P DE ++G + +
Sbjct: 83 SNLQIQNNIIDACYRFKVKKLVFLGSSCIYPKFAKQPMDEGQLLDGKLEPTNEPYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F + ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFHEAKIKDFPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVEN----PEAASSNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D++ ++N +A N+ S V++ +A+ +
Sbjct: 203 WGTGKPLREFLYSDDMARACVFLMKNYDVTGDAKGGEHVNVGSGIEVSIRELAETVKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
G ++ +D +K +H +GWR L E ++ FE+Y+
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWRHQVELKEGIRLAFEDYL 311
Query: 229 K 229
+
Sbjct: 312 R 312
>gi|262196185|ref|YP_003267394.1| NmrA family protein [Haliangium ochraceum DSM 14365]
gi|262079532|gb|ACY15501.1| NmrA family protein [Haliangium ochraceum DSM 14365]
Length = 306
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 21/159 (13%)
Query: 23 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
P D+A++ GV +F+S AG K P H +VE ++ + +
Sbjct: 87 PFVDFARAHGVDHVVFLSVAGADKNNVVP-------------HRKVEDHLRARGDHHTNL 133
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
RP + ++ + + + IV + +P Q N RD++ + TL + +PE
Sbjct: 134 RPGFFA-----QNLQTAYREDIVLDDRIYVPAGRRQPVNWIDARDIAEVATLVLADPEPH 188
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 181
+ L AV ++ + A G P+ YDP +
Sbjct: 189 RGQNYLLTGPGAVLWSEVSDSLSSALGRPIR---YDPAS 224
>gi|410939524|ref|ZP_11371351.1| GDP-L-fucose synthetase [Leptospira noguchii str. 2006001870]
gi|410785392|gb|EKR74356.1| GDP-L-fucose synthetase [Leptospira noguchii str. 2006001870]
Length = 314
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 94/244 (38%), Gaps = 48/244 (19%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D K+ LF+ S+ IY +P DE ++G + V
Sbjct: 83 SNLQIQNNIIDACYRFKTKKLLFLGSSCIYPKFARQPMDEGQLLDGKLEPTNEPYAVAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F++ ++ P V I
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFYEAKIKNLPEVII 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAA----SSNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D++S ++N + N+ S V++ +A++
Sbjct: 203 WGTGKPLREFLYSDDMASACVFLMKNYDVTGDPKGGEHVNVGSGIEVSIRELAEVVK--- 259
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKER 223
E+V Y + F PR D+ +GWR L E ++
Sbjct: 260 ----EVVEY---------QGLLTFDLTKPDGTPRKLLDVSKLHKMGWRHRVELREGIRLA 306
Query: 224 FEEY 227
FE+Y
Sbjct: 307 FEDY 310
>gi|417937985|ref|ZP_12581284.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus infantis SK970]
gi|343391626|gb|EGV04200.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus infantis SK970]
Length = 274
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
+ + + + +++ +++SS IY P D+ E DV P+ ++ YI S+ F
Sbjct: 44 ILEACRQTDIQRIVYVSSPSIYAAPKDQLVIKESDV--PEENNLN--NYIRSKLSSEKLF 99
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDL 128
RP+ + G G+ R++ +K +P+ G G Q ++ V ++
Sbjct: 100 KDYPDVPSIILRPRGLFGIGDTS-----ILPRVINLSQKIGIPLIGDGRQLMDMTCVENV 154
Query: 129 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAK 187
+ + LA+E PE A ++N+ + + + G P+ +GI +
Sbjct: 155 ALAIRLALEAPE-AKGEVYNITNGEPRAFRDLLEESLTGLGYPIRYRKIPASLLSGIASS 213
Query: 188 KAFPFRNMHFYAEP---RAAKDILGWRSTTNLPEDLKE 222
F ++ ++ EP R +L + T ++ + ++E
Sbjct: 214 LEFIYKTLNLKGEPPLTRYTYYLLRYSQTLDISKAMRE 251
>gi|452952222|gb|EME57657.1| dTDP-glucose 4,6-dehydratase [Amycolatopsis decaplanina DSM 44594]
Length = 325
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 11/151 (7%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRP 84
A+ SGV +FL IS+ +Y P VE D ++P AG + +S + +
Sbjct: 94 ARDSGVAKFLQISTPEVYGPRLTDAAVEDDALRPRNPYAGCKAAAEMLSRAYQHTFGLPV 153
Query: 85 QYMIGS---GNNKDCEE---WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
Y G+ G + E F V PVP+ GSG + HV DL++ L +
Sbjct: 154 VYTRGANAVGPQQHIENVVPLFITNAVDGEPVPLYGSGAAVRDWTHVDDLNAANHLVL-- 211
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAG 169
E N +N+ +L +A+ G
Sbjct: 212 CEGEVGNAYNIAGGNERSLIDLARAVLSELG 242
>gi|418058902|ref|ZP_12696865.1| NAD-dependent epimerase/dehydratase, partial [Methylobacterium
extorquens DSM 13060]
gi|373567579|gb|EHP93545.1| NAD-dependent epimerase/dehydratase, partial [Methylobacterium
extorquens DSM 13060]
Length = 259
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISS----AGIYKPADEPPHVEGDVVKP----DA 63
FR N+N R +AD A+ + V +F+F+SS AG PA P E D +P
Sbjct: 86 FR-NSNTEATRKLADAAQRARVGRFVFLSSIRAQAGSSAPA---PLSEADTPEPTDPYGR 141
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E+ ++E +W + RP + G+G + ++ R P P+P ++A
Sbjct: 142 SKLAAEEALAETGLDWVALRPVLVYGAGVKGNMAALL--KLART-PYPLP-----LASLA 193
Query: 124 HVRDLSSMLTLA 135
R L S+ +LA
Sbjct: 194 GRRSLVSVESLA 205
>gi|419954701|ref|ZP_14470837.1| epimerase [Pseudomonas stutzeri TS44]
gi|387968565|gb|EIK52854.1| epimerase [Pseudomonas stutzeri TS44]
Length = 309
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 19/194 (9%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 83
V + + GV++ LF SSA +Y E ++ D K +K SE++ ++ +R
Sbjct: 103 VCEAMCAEGVRRVLFASSAAVYGNNGEGEAIDEDTPKAPLTPYAADKLASEHYLDF--YR 160
Query: 84 PQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 127
Q+ + G +D F +R + P+ + G G Q + +V D
Sbjct: 161 RQHGLEPVIFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIAVFGDGEQTRDFVYVGD 220
Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 187
L +L A+E+P AA + N+ RA +L+ + + G + + P+ I
Sbjct: 221 LVEVLVQALESPVAAEGAV-NVGLSRATSLNQLLTAIGEVLGGLPAVSYQAPRPGDIRHS 279
Query: 188 KAFPFRNMHFYAEP 201
+A R + Y P
Sbjct: 280 RANNTRLLQRYRLP 293
>gi|421108684|ref|ZP_15569220.1| GDP-L-fucose synthetase [Leptospira kirschneri str. H2]
gi|410006287|gb|EKO60047.1| GDP-L-fucose synthetase [Leptospira kirschneri str. H2]
Length = 318
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 93/241 (38%), Gaps = 38/241 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D K+ LF+ S+ IY +P DE ++G + V
Sbjct: 83 SNIQIQNNIIDACYRFKTKKLLFLGSSCIYPKFAKQPMDEAQLLDGKLEPTNEPYAVAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F++ ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFYEAKIKNFPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAAS----SNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + DL ++N N+ S V++ +A++ +
Sbjct: 203 WGTGKPLREFLYSDDLGRACVFLMKNYNVTGDPKGGEHVNVGSGIEVSIRELAEVVKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
G ++ +D +K +H +GW+ L E ++ FE+Y+
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWKHQVELKEGIRLAFEDYL 311
Query: 229 K 229
+
Sbjct: 312 R 312
>gi|404398224|ref|ZP_10989808.1| UDP-glucose 4-epimerase [Pseudomonas fuscovaginae UPB0736]
Length = 309
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 20/185 (10%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ LF SSA +Y E + D K +K SE
Sbjct: 95 QSNFIGTLNVCEAMRQAGVKRVLFASSAAVYGNNGEGESIVEDTPKAPLTPYASDKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
+ ++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 155 YYFDF--YRRQHGLEPVIFRFFNVFGPRQDPSSPYSGVISIFSERAEKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
+ +V DL +L A+E P A I N+ +R+ TL M + ++ G P+ V+Y
Sbjct: 213 TRDFIYVGDLVDVLVQALEAPRAEEGAI-NVGLNRSTTLKQMLQALSEVVG-PLPPVNYA 270
Query: 179 PKAAG 183
+G
Sbjct: 271 AARSG 275
>gi|320104235|ref|YP_004179826.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
gi|319751517|gb|ADV63277.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
Length = 370
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 60/146 (41%), Gaps = 16/146 (10%)
Query: 89 GSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLA-VENPEAASSN- 145
G N D F R++R+ RPVP+ G G + +V DL + A V P SS
Sbjct: 232 GPRNRPDLALAKFARLIREGRPVPMFGDGSTERDYTYVDDLVDGVVRALVFEPSPQSSQE 291
Query: 146 --IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA 203
+FNL V L M A A G P I + + + A+ R
Sbjct: 292 VEVFNLGHSEPVRLSTMIDTLAAALGRPARIERLPEQPGDVGRTR----------ADIRR 341
Query: 204 AKDILGWRSTTNLPEDLKERFEEYVK 229
A+ +LGW T+ E + F E++K
Sbjct: 342 ARSLLGWSPVTSFEEGVTH-FVEWLK 366
>gi|365866613|ref|ZP_09406222.1| putative nucleoside-diphosphate-sugar epimerase [Streptomyces sp.
W007]
gi|364003975|gb|EHM25106.1| putative nucleoside-diphosphate-sugar epimerase [Streptomyces sp.
W007]
Length = 327
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N R+Q V A ++G ++ LF+ S+ IY +P E + G++ +
Sbjct: 98 DNLRIQLSVIAGAHAAGTERLLFLGSSCIYPRLAPQPIREDALLTGELEPTNEAYALAKI 157
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG VQ++ Y + +++ S P + G G+N D E ++R+ V +
Sbjct: 158 AGIVQIQSYRRQYGASYISAMPTNLYGPGDNFDLETSHVLPALIRRFHEARRDGAPEVTL 217
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVEN 138
GSG HV DL++ + +E
Sbjct: 218 WGSGSPRREFLHVDDLAAACVILLET 243
>gi|126696783|ref|YP_001091669.1| fucose synthetase [Prochlorococcus marinus str. MIT 9301]
gi|126543826|gb|ABO18068.1| Putative fucose synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 337
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 94/247 (38%), Gaps = 45/247 (18%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD------------ 62
++N R+Q+ V + A +G K+F+F+ S+ IY + P E +++K
Sbjct: 96 SDNLRIQQNVIESAWETGCKRFMFLGSSCIYPKNSKTPIKEEELLKSKLEKTNEPYAIAK 155
Query: 63 -AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE----------EWFFDRIVRKRPVP 111
AG E ++ + S P + G+ +N D + ++F ++ RK +
Sbjct: 156 IAGIKLCEALRKQHGFDAISLMPTNLYGTNDNYDLQNSHVLPALVRKFFEAKMKRKTYIT 215
Query: 112 IPGSGMQFTNIAHVRDLSSMLTLAVE-----------NPEAASSNIFNLVSDRAVTLDGM 160
G+G HV DL+ + +E N N N+ S +++ +
Sbjct: 216 CWGTGNPTREFLHVDDLADAIIHCLEFWDPNHSDAPKNYAGEKLNYLNVGSGFEISIKDL 275
Query: 161 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL 220
A A +I+ G FR + ++ LGW S +L L
Sbjct: 276 AHEIANCINYKGKIIWDSEMPDG-------TFRKNLDCSRIKS----LGWESKISLKNGL 324
Query: 221 KERFEEY 227
+ EE+
Sbjct: 325 RMTIEEF 331
>gi|407452176|ref|YP_006723901.1| hypothetical protein B739_1403 [Riemerella anatipestifer RA-CH-1]
gi|403313160|gb|AFR36001.1| hypothetical protein B739_1403 [Riemerella anatipestifer RA-CH-1]
Length = 336
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 9 KALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADE-PPHVEGDVVKPDAGHVQ 67
K++++TN + + + A+ V+QFL++SS + A+E P E P H
Sbjct: 95 KSMYKTN--IQGTKNLLYIAEEKKVEQFLYVSSIAVLDAANEFEPIDEESNFNPKLAHSN 152
Query: 68 VEKYISENFSNWASFR------------PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 115
IS++FS +R P +IGSGN + FD I +K P GS
Sbjct: 153 YA--ISKHFSEMEVWRASAEGMNVVVINPGVIIGSGNWEQSSGVLFDNI-KKLPFSFKGS 209
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
T VRD++ + AS F L+S+ ++ +A L + GL
Sbjct: 210 ----TGYVDVRDVADIAIKLFAEETKASGQRFILISENKTYIE-VANLVRKRLGLS 260
>gi|423097596|ref|ZP_17085392.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
fluorescens Q2-87]
gi|397885474|gb|EJL01957.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas
fluorescens Q2-87]
Length = 309
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + GVK+ LF SSA +Y E ++ + K +K SE
Sbjct: 95 QSNFIGTLNVCEAMRQVGVKRVLFASSAAVYGNNGEGQSIDEETPKAPLTPYASDKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
+ ++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 155 FYLDF--YRRQHALEPVVFRFFNIYGPRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHY 177
+ +V DL +L A++ PE + N+ ++A TL M K A+ G LP + Y
Sbjct: 213 TRDFVYVEDLVDLLVQAIKKPEVEVGAV-NVGWNQATTLKQMLKALAEVVGDLPP--ISY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|425440103|ref|ZP_18820411.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9717]
gi|389719541|emb|CCH96644.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9717]
Length = 326
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 17/156 (10%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYI----SENFSNWA 80
+GVK F+F+SS I+ A E + E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDDILNENSSCHPDSPYGRSKLQAEQALINLAKDSNMTWT 164
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENP 139
RP + G GN + E +++ KR +P+P G+ + V +L + + +++P
Sbjct: 165 ILRPTLVYGLGNRANMERLM--KLI-KRGLPLPFGAIKNRRSFVFVGNLVAAIITCLDHP 221
Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
AA+ IF + ++AV+ + +L AQ P ++
Sbjct: 222 NAANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCRLL 256
>gi|302559535|ref|ZP_07311877.1| NAD-dependent epimerase/dehydratase [Streptomyces griseoflavus
Tu4000]
gi|302477153|gb|EFL40246.1| NAD-dependent epimerase/dehydratase [Streptomyces griseoflavus
Tu4000]
Length = 336
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 6 AKFKALFRTNNNFRLQRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
+ F F NN + + A ++G VK F+F SS +Y A++ P E V P+
Sbjct: 79 SHFIKRFNYMNNVVGSVNLINAAVNAGTVKCFVFTSSIAVYG-ANQLPMSEDLVPAPEDP 137
Query: 65 H------VQVEKYISENFSN--WASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVP 111
+ V+ E ++ + FRP + G N ++ F ++ +R
Sbjct: 138 YGIAKFSVEQELRVTHEMFGLPYVIFRPHNVYGEYQNIGDRYRNVIGIFMNQALRGEEFT 197
Query: 112 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
+ G G Q ++++D++ + +VE P AA + +FN+ D+ +++ +A +A G+
Sbjct: 198 VFGDGEQTRAFSYIKDVAPAIARSVELP-AAYNEVFNVGGDQVYSVNRIAAAVCEAMGVE 256
Query: 172 VEIVH 176
+ + H
Sbjct: 257 LRVNH 261
>gi|158423146|ref|YP_001524438.1| NAD-dependent epimerase [Azorhizobium caulinodans ORS 571]
gi|158330035|dbj|BAF87520.1| NAD-dependent epimerase [Azorhizobium caulinodans ORS 571]
Length = 320
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 27/203 (13%)
Query: 34 KQFLFISSAG-IYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSNWASF-----R 83
++ +F SS G +Y P E + P AG E YIS +SN R
Sbjct: 114 RRLVFSSSGGTVYGRLHRVPVREDHALSPLNAYGAGKAAAELYIS-TYSNLHGLDTRIAR 172
Query: 84 PQYMIGSGNN----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS-MLTLAVEN 138
G+G N + F R + + I G G + H+ D ++ ++ LA N
Sbjct: 173 LSNPFGAGQNLARGQGAATTFLARAINNEQIVIWGDGEVVRDYVHIADAAAGLVALACAN 232
Query: 139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY 198
AS + FN+ S + VTL+ + G P++ V Y+P A P+
Sbjct: 233 SVGAS-HTFNIGSGQGVTLNAIIAELETELGRPLD-VRYEP---------ARPYDVPVSV 281
Query: 199 AEPRAAKDILGWRSTTNLPEDLK 221
+ AA LGWR + E ++
Sbjct: 282 LDISAAHAALGWRPRLSFAEGIR 304
>gi|296387375|ref|ZP_06876874.1| putative epimerase [Pseudomonas aeruginosa PAb1]
gi|416879365|ref|ZP_11920801.1| putative epimerase [Pseudomonas aeruginosa 152504]
gi|334837474|gb|EGM16234.1| putative epimerase [Pseudomonas aeruginosa 152504]
Length = 309
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 15/189 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF + + + GVK+ +F SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASE 154
Query: 75 NFSNW---------ASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
+ ++ A FR + G S F +R ++ P+ + G G Q
Sbjct: 155 YYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTPITVFGDGEQTR 214
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
+ +V DL L A+E A N+ +R+++L + Q G + H D +
Sbjct: 215 DFIYVADLVDFLVQALE-ATAVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPVTHADAR 273
Query: 181 AAGIDAKKA 189
A I +A
Sbjct: 274 AGDIRHSRA 282
>gi|226229173|ref|YP_002763279.1| NAD-dependent epimerase/dehydratase family protein [Gemmatimonas
aurantiaca T-27]
gi|226092364|dbj|BAH40809.1| NAD-dependent epimerase/dehydratase family protein [Gemmatimonas
aurantiaca T-27]
Length = 339
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 28/150 (18%)
Query: 33 VKQFLFISSAGIYK-----------PADEPPHVEGDVVKPDAG-------HVQVEKYISE 74
V Q++++SS YK P +P + G PDA V+ E+ + E
Sbjct: 89 VDQYVYVSSTAAYKDFARSFPDETHPTQDPAPITG----PDAAAAPFGNKKVRCEQLVQE 144
Query: 75 NFSNWASF-RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
F N A+ RP ++G G+ D ++ RI + V PG RDL+ +
Sbjct: 145 AFGNGATIVRPGLIVGPGDLTDRFTYWPVRIEKGGEVLAPGKLEDPAQWIDARDLAEWMV 204
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKL 163
VE+ ++ +FN V R T+ G+ +L
Sbjct: 205 RMVES---RTTGVFNAVGPR--TVCGIGEL 229
>gi|170755592|ref|YP_001782294.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum B1 str.
Okra]
gi|429246922|ref|ZP_19210208.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum
CFSAN001628]
gi|169120804|gb|ACA44640.1| NAD-dependent epimerase/dehydratase family protein [Clostridium
botulinum B1 str. Okra]
gi|428756087|gb|EKX78672.1| NAD-dependent epimerase/dehydratase [Clostridium botulinum
CFSAN001628]
Length = 305
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 90/230 (39%), Gaps = 27/230 (11%)
Query: 11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK 70
+F +N N + GVK+ ++ SSA +Y + P E VKP + + + K
Sbjct: 86 MFDSNVNICGTVNILKSCVDYGVKKIIYPSSAAVYGQPEYLPIDEKHRVKPISSY-GLSK 144
Query: 71 YISENFS---------NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGM 117
Y E + ++ FR + G + E F DR+ + P+ I G G
Sbjct: 145 YTPEEYIRSFSELYNLDYTIFRYANVYGIRQDPKGEGGVVSIFMDRLFKNYPLCIFGDGK 204
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 177
+ +V D+ + A+ N S N+FN+ + T+ +A++ + I +
Sbjct: 205 ALRDYIYVEDVVNANIAALYN---GSRNLFNIGTGVYTTVKDLAQMMIDTMKVQSHIEYQ 261
Query: 178 DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
+ + I+ HF E AK L W NL + L + Y
Sbjct: 262 EARKGDIEKS--------HFNIEK--AKVELKWEPKYNLQKGLIKTINYY 301
>gi|420239083|ref|ZP_14743433.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF080]
gi|398082779|gb|EJL73521.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF080]
Length = 323
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 92/239 (38%), Gaps = 40/239 (16%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N L+ + A + GV++ +F+ S+ IY K AD+P P E +
Sbjct: 88 DNLILEANIIQAAHTVGVEKLMFLGSSCIYPKFADQPITEESLLTGSLEPTNEWYAIAKI 147
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-WFFDRIVRKR---------PVPI 112
AG + Y ++ ++ S P + G G+N D + ++RK + +
Sbjct: 148 AGIKLCQAYRKQHGHDFISAMPTNLYGPGDNFDLKSSHVMPALIRKAHEAKTGHLPDITV 207
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G HV D + ++ A + N+ S VT+ + KL + G
Sbjct: 208 WGTGTPRREFLHVDDCADACVHLMKTYSAETH--VNVGSGEDVTILELTKLVCKVVGFEG 265
Query: 173 EIVHYDPKAAGIDAK--KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
EIVH K G K A R LGW L E + + ++ ++K
Sbjct: 266 EIVHDLTKPDGTPRKLMSANKLRG-------------LGWSPRIGLQEGITDAYQAFLK 311
>gi|418691667|ref|ZP_13252751.1| GDP-L-fucose synthetase [Leptospira interrogans str. FPW2026]
gi|421122814|ref|ZP_15583097.1| GDP-L-fucose synthetase [Leptospira interrogans str. Brem 329]
gi|400358429|gb|EJP14509.1| GDP-L-fucose synthetase [Leptospira interrogans str. FPW2026]
gi|410344714|gb|EKO95880.1| GDP-L-fucose synthetase [Leptospira interrogans str. Brem 329]
Length = 318
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 93/241 (38%), Gaps = 38/241 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q V D K+ LF+ S+ IY +P DE ++G + V
Sbjct: 83 SNIQIQNNVIDACYRFKTKKLLFLGSSCIYPKFAKQPMDESQLLDGKLEPTNEPYAVAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F++ ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFYEAKIKNLPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAAS----SNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D+ ++N + N+ S V++ +A+ +
Sbjct: 203 WGTGKPLREFLYSDDMGHACVFLMKNYDVTGDPKGGEHVNVGSGIEVSIRELAETIKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
G ++ +D +K +H +GW+ L E ++ FE+Y+
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWKHQVELKEGIRLAFEDYL 311
Query: 229 K 229
+
Sbjct: 312 R 312
>gi|373955508|ref|ZP_09615468.1| NAD-dependent epimerase/dehydratase [Mucilaginibacter paludis DSM
18603]
gi|373892108|gb|EHQ28005.1| NAD-dependent epimerase/dehydratase [Mucilaginibacter paludis DSM
18603]
Length = 308
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 97/236 (41%), Gaps = 36/236 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPD-------- 62
+N ++Q V + +GVK+ LF+ S+ IY +P E + G + + +
Sbjct: 83 DNLQIQNNVIHQSHLNGVKKLLFLGSSCIYPKMAPQPLKEDYLLTGTLEETNEPYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG + Y ++ N+ S P + G +N + F + V P V I
Sbjct: 143 AGIKMCDAYRAQYGCNYISVMPTNLYGYNDNYHPQNSHVLPALIRRFHEAKVNGTPSVTI 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G DL++ +EN + N+ N+ + +++ +A+L + G
Sbjct: 203 WGTGSPKREFLFADDLAAACYYLMENYD--EPNLINIGTGEDLSIKELAELIKKTIGYEG 260
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
EI ++D +K +H GW+ T +LPE ++ +++++
Sbjct: 261 EI-NFDTSKPDGTPRKLMDVSKLHSK----------GWKHTIDLPEGIQLAYQDFL 305
>gi|238063704|ref|ZP_04608413.1| nucleoside-diphosphate-sugar epimerase [Micromonospora sp. ATCC
39149]
gi|237885515|gb|EEP74343.1| nucleoside-diphosphate-sugar epimerase [Micromonospora sp. ATCC
39149]
Length = 310
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 28/209 (13%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNW 79
A GV++ +F SSA +Y + P E D + P AG + Y NW
Sbjct: 109 AADHGVRRLVFASSASVYGDPKKLPMHEDDPLNPLTPYCISKRAGEDLLAYYQRSRGLNW 168
Query: 80 ASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ R + G G F R+ +P I G G Q + HV D++ +
Sbjct: 169 IALRFFNVYGPGQKPTAYYTSVINHFVKRLKTGQPPIIDGRGEQSMDFIHVHDIARSVVA 228
Query: 135 AVENPEAASSNI-FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
A+ EA N+ N+ + ++ +A++ +A G+ V ++P+ + + A R
Sbjct: 229 AL---EADRGNVPVNIGTGIDTSVATLAEILIKAVGVDVA-PQFNPRDVLVSRRAADITR 284
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
A+++LGW T + + + +
Sbjct: 285 ----------AREVLGWEPTIAVEDGMAD 303
>gi|269139568|ref|YP_003296269.1| NAD-dependent epimerase/dehydratase [Edwardsiella tarda EIB202]
gi|387868143|ref|YP_005699612.1| Putative nucleotide di-P-sugar epimerase or dehydratase
[Edwardsiella tarda FL6-60]
gi|267985229|gb|ACY85058.1| NAD-dependent epimerase/dehydratase [Edwardsiella tarda EIB202]
gi|304559456|gb|ADM42120.1| Putative nucleotide di-P-sugar epimerase or dehydratase
[Edwardsiella tarda FL6-60]
Length = 336
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 13/177 (7%)
Query: 9 KALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIY---------KPADEPPHVEGDVV 59
+ALF T N R R + +WA + GV QF+ ISS +Y K P
Sbjct: 83 QALFETAN-VRATRRLGEWAAAYGVGQFIHISSPAVYFDYRHHHDIKEEFTPTRYANYYA 141
Query: 60 KPDAGHVQVEKY--ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 117
+ A +V + ++ +++ RPQ + G ++K + + + +P G
Sbjct: 142 RSKAAGEEVIRTLALANPQTHFTILRPQGLFGP-HDKVLLPRLMGTMKKHGYLLLPHGGS 200
Query: 118 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI 174
++ + + + LA + P+ AS ++N+ + + TL M + G+ +
Sbjct: 201 TLLDMTYEENAVHAMWLASQRPDTASGRVYNITNHQPQTLRLMLQQLIDELGIACRL 257
>gi|163851458|ref|YP_001639501.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
PA1]
gi|163663063|gb|ABY30430.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens
PA1]
Length = 307
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISS----AGIYKPADEPPHVEGDVVKP----DA 63
FR N+N R +AD A+ + V +F+F+SS AG PA P E D +P
Sbjct: 86 FR-NSNTEATRKLADAAQRARVGRFVFLSSIRAQAGSSAPA---PLSEADAPEPTDPYGR 141
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 123
+ E+ + E +W + RP + G+G + ++ R P P+P ++A
Sbjct: 142 SKLAAEEALGETGLDWVALRPVLVYGAGVKGNMAALL--KLART-PYPLP-----LASLA 193
Query: 124 HVRDLSSMLTLA 135
R L S+ +LA
Sbjct: 194 GRRSLVSVESLA 205
>gi|338214070|ref|YP_004658127.1| UDP-glucuronate 4-epimerase [Runella slithyformis DSM 19594]
gi|336307893|gb|AEI50995.1| UDP-glucuronate 4-epimerase [Runella slithyformis DSM 19594]
Length = 317
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV----VKPDAGHVQVEKYISENFSNW 79
V + + +G++ +F SS+ +Y A P E D + P A + + ++ ++ +
Sbjct: 111 VLEAMREAGLRTLIFASSSSVYGNAAHVPFKETDAADQPISPYAASKRAAELLAYSYYSL 170
Query: 80 ASF---------------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
F RP+ I F RI+ + P+ + G+G+ F N +
Sbjct: 171 YGFQITCLRLFTVYGPRQRPEMAI---------RKFIHRILEEEPIELYGNGLTFRNYTY 221
Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 183
V D L A+E+ ++N+ +++ L + ++ Q +I+ Y P+ AG
Sbjct: 222 VADAVQGLMKALEHS-GEGFRVYNIGGAKSICLKEVIEVIEQITNKKSKII-YRPEQAG 278
>gi|222148124|ref|YP_002549081.1| UDP-glucose 4-epimerase [Agrobacterium vitis S4]
gi|221735112|gb|ACM36075.1| UDP-glucose 4-epimerase [Agrobacterium vitis S4]
Length = 324
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 35/221 (15%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP------------- 61
NNN + D + +GV +F S+ Y P VE P
Sbjct: 91 NNNIHGSVCLLDAMRRNGVDTIVFSSTCATYGEVKSLPIVEEAPQSPVNPYGFSKLVIEQ 150
Query: 62 ---DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI--VRKRPVPIPGS- 115
D GH K+++ + N A P+ +G ++ + + +R+ + G+
Sbjct: 151 ALKDYGHAYGLKWVAMRYFNAAGLDPEGDLGERHDPETHAIPLAVLAAMRQTEFNVFGTD 210
Query: 116 -----GMQFTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRAVTLDGMAKLCAQAAG 169
G + HV DL+ LA++ + S FNL + + ++ + + ++A G
Sbjct: 211 YDTPDGTAVRDYIHVCDLADAHVLAIDYLQKGGESGAFNLATGKGTSVKDLLEAVSEAVG 270
Query: 170 LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 210
V I Y P+ AG DA YA A+ +LGW
Sbjct: 271 AQVPI-KYAPRRAG-DAPA--------LYASGDKARSLLGW 301
>gi|448577784|ref|ZP_21643219.1| NAD-dependent epimerase/dehydratase [Haloferax larsenii JCM 13917]
gi|445726325|gb|ELZ77941.1| NAD-dependent epimerase/dehydratase [Haloferax larsenii JCM 13917]
Length = 272
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 11/123 (8%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F D+ + + G G Q + HV D+ LA EA + FN+ + ++++ G
Sbjct: 157 FRDQARSGDDITVEGDGDQTRDFVHVDDIVQANLLAATTDEAVGES-FNIGTGESISIRG 215
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A+ +IVH DP+ ID + A+ A+ +LG+ ++ +
Sbjct: 216 LAETIQNVTETDSDIVHVDPREGDIDRSR----------ADISKAQTVLGFEPEYSITDG 265
Query: 220 LKE 222
L E
Sbjct: 266 LAE 268
>gi|334134440|ref|ZP_08507950.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus
sp. HGF7]
gi|333608248|gb|EGL19552.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus
sp. HGF7]
Length = 311
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 44/236 (18%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQV----EK 70
N F R A ++ +G ++LF+S+ G+Y D+P E V P + + E+
Sbjct: 95 NQFARYR-TAKRSREAGAGRYLFMSTCGVYGFRDDPRGADEKAVPNPLTTYAKAACRSER 153
Query: 71 YI----SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV--------RKRPVPIPGSGMQ 118
I E F + RP + G FD V + + + G G Q
Sbjct: 154 DILLLGREGFDVTVA-RPAILYGYSPRMR-----FDLAVNAMVRAAWQTGAITLQGGGGQ 207
Query: 119 FTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPVEIVH 176
+ H++D + +E P E ++ IFN+ S + + + +A+L A +PVEI
Sbjct: 208 WRPFVHLKDAVEAVCCLLEAPAEKVTAEIFNIGSGGQNIRIRDLAELVAAVLPIPVEIRR 267
Query: 177 ---YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
DP++ I+A K +LGW+++ +L E ++E + + V+
Sbjct: 268 EGPADPRSYRINADKI---------------GGVLGWKASYSLKEGIEELYGKLVR 308
>gi|312622609|ref|YP_004024222.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203076|gb|ADQ46403.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 305
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 27/218 (12%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-- 81
+ D+ VK+F+F SSA +Y P E ++P++ + + K SE + +
Sbjct: 98 LLDYCVKYKVKKFIFASSAAVYGEPKYIPIDENHPLRPESFY-GLSKLTSEEYIKMFAHK 156
Query: 82 FRPQYMIGSGNN-----------KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
F +Y+I +N F +R++ + V I G G Q + +V D++
Sbjct: 157 FHFEYIIFRYSNVYGPRQDPFGEGGVVSIFCERMLGSKDVIIYGDGTQTRDFIYVEDVAE 216
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
+A+ E++ S FNL + + ++++ + ++ + G V+ + I
Sbjct: 217 ANCIAL---ESSVSGTFNLSTGKNISVNELFEILSGLTGYKKSPVYQSKRPGDI------ 267
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
H K +LG+ +L E LK+ E ++
Sbjct: 268 ----AHSCLSNNLLKSVLGFSPQFSLLEGLKKTVECFI 301
>gi|107103582|ref|ZP_01367500.1| hypothetical protein PaerPA_01004652 [Pseudomonas aeruginosa PACS2]
Length = 309
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 15/189 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF + + + GVK+ +F SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASE 154
Query: 75 NFSNW---------ASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
+ ++ A FR + G S F +R ++ P+ + G G Q
Sbjct: 155 YYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTPITVFGDGEQTR 214
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
+ +V DL L A+E A N+ +R+++L + Q G + H D +
Sbjct: 215 DFIYVADLVDFLVQALE-ATAVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPVTHADAR 273
Query: 181 AAGIDAKKA 189
A I +A
Sbjct: 274 AGDIRHSRA 282
>gi|1161517|emb|CAA89986.1| UDP-galactose 4-epimease [Corynebacterium glutamicum]
Length = 329
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 39/222 (17%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
++N + D ++ GV +F S+A Y D P E +P + + I
Sbjct: 89 HDNVVTALTLLDAMRAHGVNNLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDY 148
Query: 75 NFSNWA--------SFRPQYMIGS----GNNKDCEEWFFDRIVRKRPV------------ 110
+++A S R + G+ G N++ E +++
Sbjct: 149 AITSYAAAFGLAATSLRYFNVAGAYGNIGENREVETHLIPLVLQVATGHREKIFMFGDDW 208
Query: 111 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG- 169
P P G + H+ DL+ LA+E+ EA IFNL S ++ + ++C + G
Sbjct: 209 PTP-DGTAVRDYIHILDLAKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGH 267
Query: 170 -LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 210
+P E+ P+ AG A A AK LGW
Sbjct: 268 PIPAEVA---PRRAGDPAT---------LIASSEKAKQELGW 297
>gi|116052104|ref|YP_789052.1| epimerase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421172664|ref|ZP_15630429.1| epimerase [Pseudomonas aeruginosa CI27]
gi|115587325|gb|ABJ13340.1| putative NAD-dependent epimerase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404537354|gb|EKA46957.1| epimerase [Pseudomonas aeruginosa CI27]
Length = 309
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 15/189 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF + + + GVK+ +F SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASE 154
Query: 75 NFSNW---------ASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
+ ++ A FR + G S F +R ++ P+ + G G Q
Sbjct: 155 YYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTPITVFGDGEQTR 214
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
+ +V DL L A+E A N+ +R+++L + Q G + H D +
Sbjct: 215 DFIYVADLVDFLVQALE-ATAVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPVTHADAR 273
Query: 181 AAGIDAKKA 189
A I +A
Sbjct: 274 AGDIRHSRA 282
>gi|15599263|ref|NP_252757.1| epimerase [Pseudomonas aeruginosa PAO1]
gi|218889651|ref|YP_002438515.1| putative epimerase [Pseudomonas aeruginosa LESB58]
gi|254236956|ref|ZP_04930279.1| hypothetical protein PACG_02980 [Pseudomonas aeruginosa C3719]
gi|254242750|ref|ZP_04936072.1| hypothetical protein PA2G_03515 [Pseudomonas aeruginosa 2192]
gi|313109509|ref|ZP_07795464.1| putative NAD-dependent epimerase [Pseudomonas aeruginosa 39016]
gi|355639252|ref|ZP_09051054.1| hypothetical protein HMPREF1030_00140 [Pseudomonas sp. 2_1_26]
gi|386056939|ref|YP_005973461.1| putative epimerase [Pseudomonas aeruginosa M18]
gi|386068171|ref|YP_005983475.1| putative epimerase [Pseudomonas aeruginosa NCGM2.S1]
gi|392982205|ref|YP_006480792.1| epimerase [Pseudomonas aeruginosa DK2]
gi|416862610|ref|ZP_11915059.1| putative epimerase [Pseudomonas aeruginosa 138244]
gi|418584547|ref|ZP_13148608.1| putative epimerase [Pseudomonas aeruginosa MPAO1/P1]
gi|418591083|ref|ZP_13154985.1| putative epimerase [Pseudomonas aeruginosa MPAO1/P2]
gi|419756837|ref|ZP_14283182.1| putative epimerase [Pseudomonas aeruginosa PADK2_CF510]
gi|420137617|ref|ZP_14645582.1| epimerase [Pseudomonas aeruginosa CIG1]
gi|421158053|ref|ZP_15617351.1| epimerase [Pseudomonas aeruginosa ATCC 25324]
gi|421178760|ref|ZP_15636363.1| epimerase [Pseudomonas aeruginosa E2]
gi|421518616|ref|ZP_15965290.1| putative epimerase [Pseudomonas aeruginosa PAO579]
gi|424939053|ref|ZP_18354816.1| probable epimerase [Pseudomonas aeruginosa NCMG1179]
gi|451982980|ref|ZP_21931277.1| UDP-glucose 4-epimerase [Pseudomonas aeruginosa 18A]
gi|9950266|gb|AAG07455.1|AE004823_1 probable epimerase [Pseudomonas aeruginosa PAO1]
gi|126168887|gb|EAZ54398.1| hypothetical protein PACG_02980 [Pseudomonas aeruginosa C3719]
gi|126196128|gb|EAZ60191.1| hypothetical protein PA2G_03515 [Pseudomonas aeruginosa 2192]
gi|218769874|emb|CAW25635.1| probable epimerase [Pseudomonas aeruginosa LESB58]
gi|310881966|gb|EFQ40560.1| putative NAD-dependent epimerase [Pseudomonas aeruginosa 39016]
gi|334835888|gb|EGM14733.1| putative epimerase [Pseudomonas aeruginosa 138244]
gi|346055499|dbj|GAA15382.1| probable epimerase [Pseudomonas aeruginosa NCMG1179]
gi|347303245|gb|AEO73359.1| putative epimerase [Pseudomonas aeruginosa M18]
gi|348036730|dbj|BAK92090.1| putative epimerase [Pseudomonas aeruginosa NCGM2.S1]
gi|354832107|gb|EHF16108.1| hypothetical protein HMPREF1030_00140 [Pseudomonas sp. 2_1_26]
gi|375045769|gb|EHS38344.1| putative epimerase [Pseudomonas aeruginosa MPAO1/P1]
gi|375050068|gb|EHS42553.1| putative epimerase [Pseudomonas aeruginosa MPAO1/P2]
gi|384396592|gb|EIE43010.1| putative epimerase [Pseudomonas aeruginosa PADK2_CF510]
gi|392317710|gb|AFM63090.1| putative epimerase [Pseudomonas aeruginosa DK2]
gi|403249593|gb|EJY63084.1| epimerase [Pseudomonas aeruginosa CIG1]
gi|404348098|gb|EJZ74447.1| putative epimerase [Pseudomonas aeruginosa PAO579]
gi|404547858|gb|EKA56838.1| epimerase [Pseudomonas aeruginosa E2]
gi|404549989|gb|EKA58797.1| epimerase [Pseudomonas aeruginosa ATCC 25324]
gi|451759348|emb|CCQ83800.1| UDP-glucose 4-epimerase [Pseudomonas aeruginosa 18A]
gi|453043282|gb|EME91014.1| epimerase [Pseudomonas aeruginosa PA21_ST175]
Length = 309
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 15/189 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF + + + GVK+ +F SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASE 154
Query: 75 NFSNW---------ASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
+ ++ A FR + G S F +R ++ P+ + G G Q
Sbjct: 155 YYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTPITVFGDGEQTR 214
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
+ +V DL L A+E A N+ +R+++L + Q G + H D +
Sbjct: 215 DFIYVADLVDFLVQALE-ATAVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPVTHADAR 273
Query: 181 AAGIDAKKA 189
A I +A
Sbjct: 274 AGDIRHSRA 282
>gi|421168128|ref|ZP_15626239.1| epimerase [Pseudomonas aeruginosa ATCC 700888]
gi|404531490|gb|EKA41437.1| epimerase [Pseudomonas aeruginosa ATCC 700888]
Length = 309
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 15/189 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF + + + GVK+ +F SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASE 154
Query: 75 NFSNW---------ASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
+ ++ A FR + G S F +R ++ P+ + G G Q
Sbjct: 155 YYLDFYRHQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTPITVFGDGEQTR 214
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
+ +V DL L A+E A N+ +R+++L + Q G + H D +
Sbjct: 215 DFIYVADLVDFLVQALE-ATAVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPVTHADAR 273
Query: 181 AAGIDAKKA 189
A I +A
Sbjct: 274 AGDIRHSRA 282
>gi|389875578|ref|YP_006373313.1| NAD-dependent epimerase/dehydratase [Tistrella mobilis
KA081020-065]
gi|388530533|gb|AFK55729.1| NAD-dependent epimerase/dehydratase [Tistrella mobilis
KA081020-065]
Length = 372
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R++ +P + G Q + HVRD++ LA+E P +FN+ S R T+ G
Sbjct: 231 FAGRLLNGQPPLVFEDGEQQRDFVHVRDVARAFRLALETP-GIGGEVFNIASGRVYTVSG 289
Query: 160 MAKLCAQA 167
+A+L A+A
Sbjct: 290 VARLLARA 297
>gi|190892423|ref|YP_001978965.1| mRNA-binding protein [Rhizobium etli CIAT 652]
gi|190697702|gb|ACE91787.1| putative mRNA-binding protein [Rhizobium etli CIAT 652]
Length = 326
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 16/159 (10%)
Query: 30 SSGVKQFLFISSAGIYKPADEPPH-----VEGDVVKPDAGHVQVEKYISENFSN-----W 79
S Q++FISSA +Y ++PP E + P + Q + E W
Sbjct: 87 SGKCGQYVFISSASVY---EKPPRHYVITEETPAINPYWPYSQAKIACEELLKKSGNLAW 143
Query: 80 ASFRPQYMIGSG--NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
RP + + +G E R++ P+ + G G + D + + +
Sbjct: 144 TIVRPSHTVRTGLPMMMGDSEIMARRLLDGEPIIVAGDGHTPWTLTRSADFAVPF-VGLF 202
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+AA + IF++ SDRA T D + K A+ G+ +IVH
Sbjct: 203 GKQAAVNEIFHITSDRAHTWDDIQKTIARLLGVEAKIVH 241
>gi|153006070|ref|YP_001380395.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5]
gi|152029643|gb|ABS27411.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5]
Length = 373
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R++ +RP + G+Q + HV+D++ LA+E PEAA + N+ S R+ T+
Sbjct: 232 FAARLLNRRPPLVNEDGLQRRDFVHVQDVARACLLALEAPEAAGLAL-NVGSGRSFTVRE 290
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A+ A A G IV P+ G +A R H +A+ A+ +LG+ E
Sbjct: 291 IAERLATALG-EERIV---PEITG--RYRAGDIR--HCFADVSLARRVLGYEPQVAFDEG 342
Query: 220 LKE 222
L E
Sbjct: 343 LTE 345
>gi|147677436|ref|YP_001211651.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum
thermopropionicum SI]
gi|146273533|dbj|BAF59282.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum
thermopropionicum SI]
Length = 312
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 23/195 (11%)
Query: 36 FLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS---------FRPQY 86
+++SS +Y P E ++P H V K ENF + R
Sbjct: 116 LVYVSSIAVYGNDKYIPMDENHPLEPVLIHGAV-KLAGENFCRTMAASNGLRMVILRVAD 174
Query: 87 MIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 145
+ G N++ F + ++ P+ + G G V D + L++ PEA
Sbjct: 175 IYGPRNSRVSVPIKFLLQAMKGEPITVYGDGSDRRTYTFVSDFCEAVVLSLLRPEAVG-G 233
Query: 146 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 205
+FN+ D V++ +A +AAG ++ D AAG R + + R AK
Sbjct: 234 VFNIGGDECVSMRELALKVKKAAGSKSPVIFQDAPAAG---------RTLCI--DSRKAK 282
Query: 206 DILGWRSTTNLPEDL 220
+LG+R +L E L
Sbjct: 283 KLLGFRPAFDLAEGL 297
>gi|399007072|ref|ZP_10709588.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM17]
gi|398121029|gb|EJM10672.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM17]
Length = 310
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 92/227 (40%), Gaps = 29/227 (12%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN 75
+NF V + ++G+++ +F SSA +Y E ++ D +K SE+
Sbjct: 96 SNFIGTLRVCEAMIAAGIRRVVFASSAAVYGNNGEGTPIDEDTPTSPLTPYAADKLSSEH 155
Query: 76 FSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQF 119
+ N+ +R Q+ + G +D F +R RP+ + G G Q
Sbjct: 156 YLNF--YRRQHGLEPVILRFFNIFGPRQDPLSPYSGVISIFSERAKTGRPIVVFGDGEQT 213
Query: 120 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 179
+ +V DL +L +E+P+ A ++ N+ TL+ + + +G P+ + H
Sbjct: 214 RDFVYVEDLVKILLQGLEHPQPA-ADATNVGLGGVTTLNDLITALERISGKPLSVSHAAA 272
Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 226
++ I H A+ R ++ G S T + E L +
Sbjct: 273 RSGDI----------RHSKADNRRLRERFGLGSPTTVAEGLARLYHS 309
>gi|397671126|ref|YP_006512661.1| UDP-glucose 4-epimerase [Propionibacterium propionicum F0230a]
gi|395141335|gb|AFN45442.1| UDP-glucose 4-epimerase [Propionibacterium propionicum F0230a]
Length = 329
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 42/214 (19%)
Query: 29 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE---KYISENFSNWASFRPQ 85
+ +GV++FLF SSA IY P + E ++P + + + + + I E+F+ + R
Sbjct: 104 QRNGVERFLFSSSASIYAPDENFVVTEDSPLQPGSPYARTKFMVELILEDFTRASDVRVA 163
Query: 86 YM-----IG------SGNN---------KDCEEWFFDRIVRKRPVPIP---GSGMQFTNI 122
+ IG SG K E W V P GSG++ +
Sbjct: 164 SLRYFNPIGTDPKLRSGQQLEKPSHVLAKLLEAWVNKETFTVTGVDWPTRDGSGIR--DF 221
Query: 123 AHVRDLSSMLTLAVENPEAASSN----IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
HV DL+ A+E+ + A++ +FN+ + VT+ +A + G P++ D
Sbjct: 222 IHVWDLARAHVAALEHFDEATATDPYQVFNIGTGNGVTVKELAASFEKITGDPLKARFGD 281
Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS 212
P+ P Y AKD+LGW +
Sbjct: 282 PR----------PGDVAGVYTVSTKAKDVLGWEA 305
>gi|344209404|ref|YP_004794545.1| UDP-glucuronate 4-epimerase [Stenotrophomonas maltophilia JV3]
gi|343780766|gb|AEM53319.1| UDP-glucuronate 4-epimerase [Stenotrophomonas maltophilia JV3]
Length = 321
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 77/207 (37%), Gaps = 22/207 (10%)
Query: 26 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV---------KPDAGHVQVEKYISENF 76
+ + GV+ ++ SS+ +Y + PP E V A + Y
Sbjct: 110 ELCRHRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMAYTYAQLYG 169
Query: 77 SNWASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
+ R + G D F R ++ RP+ + G + HV D+ S + A
Sbjct: 170 LHATGLRFFTVYGPWGRPDMAPLLFSRAVLAGRPIDVFNEGRMQRDFTHVSDIVSGILGA 229
Query: 136 VENPE--AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
+ +P +FNL + V L+ + QAAG P + V+ K P
Sbjct: 230 LAHPADGPVPHRVFNLGNHTPVELERFISVIEQAAGRPAQKVY----------KPMQPGD 279
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDL 220
+ A+ R A D G+ + T + E L
Sbjct: 280 MVRTMADTRRAHDAFGFDAVTPIEEGL 306
>gi|291534641|emb|CBL07753.1| Nucleoside-diphosphate-sugar epimerases [Roseburia intestinalis
M50/1]
gi|291540659|emb|CBL13770.1| Nucleoside-diphosphate-sugar epimerases [Roseburia intestinalis
XB6B4]
Length = 304
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI------ 88
+ +F+SSAG+Y + P E D + P + + V K + E ++ + Y I
Sbjct: 111 KIIFLSSAGVYGNPKQLPITEKDALAPISPY-GVHKQMGEELCSYYNRVHGYHIRCVRIF 169
Query: 89 ---GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL--SSMLTLAVENPEAAS 143
GSG K + + + + + G+G + + H+ D+ + L L + PE
Sbjct: 170 SAYGSGLRKQLLWDIYQKYLNTGRIDLFGTGNETRDFIHISDILRALELILGYQGPE--- 226
Query: 144 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 181
IFN+ + V++ +A++ A G +IV ++ +
Sbjct: 227 -EIFNVANGEEVSIRELAEIYAAQLGEKTDIVRFNGET 263
>gi|168058075|ref|XP_001781036.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667517|gb|EDQ54145.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 312
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 92/241 (38%), Gaps = 46/241 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV-------------VKPDA 63
N ++Q V D A SGVK+ LF+ S+ IY + P VE + V A
Sbjct: 86 NLQIQTNVIDAAYKSGVKKLLFLGSSCIYPKFAQVPIVEESLLTGPLEATNEWYAVAKIA 145
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G + Y + + S P + G +N E ++R+ + V +
Sbjct: 146 GIKMCQAYRLQYNFDAISGMPTNLYGPHDNFHPENSHVLPALIRRFHEAKVNGAKEVVVW 205
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
GSG F HV DL+ ++N A N+ S V++ +A++ + G +
Sbjct: 206 GSGSPFREFLHVDDLAEATVFLLQNYSAHEH--VNMGSGSEVSIKELAEMVKEVVGFQGQ 263
Query: 174 IVHYDPKAAG-----IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
+ K G ID+ K NM GW++ L E L E ++ Y
Sbjct: 264 LTWDTSKPDGTPRKLIDSSK---LANM-------------GWQARIPLKEGLAETYKWYC 307
Query: 229 K 229
+
Sbjct: 308 E 308
>gi|428203719|ref|YP_007082308.1| nucleoside-diphosphate-sugar epimerase [Pleurocapsa sp. PCC 7327]
gi|427981151|gb|AFY78751.1| nucleoside-diphosphate-sugar epimerase [Pleurocapsa sp. PCC 7327]
Length = 315
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 90/222 (40%), Gaps = 21/222 (9%)
Query: 14 TNNNFRLQRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQV 68
T N + + + AK S +K+ +F SS+ IY A+ P E +P + + +
Sbjct: 99 TERNINATQIILEAAKESKSLKRLVFASSSSIYGNAETLPTPESICPQPTSPYGITKLAA 158
Query: 69 EKYISENFSNW----ASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIA 123
E + N+ + R + G D FF + P+PI G G Q +
Sbjct: 159 EYLCFLYYRNFQVPVTALRYFSVYGPRQRPDMAFHKFFKAAMVGAPIPIYGDGQQTRDFT 218
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 183
V D+ + A P+A FN+ V L M A +P++ +Y A G
Sbjct: 219 FVSDVVAANLAAATVPDAI-GEAFNIGGGSRVVLADMLDKIEAIAAIPIQ-RNYLETARG 276
Query: 184 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
DA+ H A+ AK +LGW +L E L +++E
Sbjct: 277 -DAR--------HTGADVSKAKALLGWSPKVSLIEGLTQQWE 309
>gi|424895811|ref|ZP_18319385.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393180038|gb|EJC80077.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 326
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 22/162 (13%)
Query: 30 SSGVKQFLFISSAGIYKPADEPPH-----VEGDVVKP----DAGHVQVEKYISENFS-NW 79
S Q++FISSA +Y ++PP E + P + E+ + ++ + W
Sbjct: 87 SGHCGQYIFISSASVY---EKPPRHYVITEETPAINPYWPYSQAKIACEELLQKSGNLGW 143
Query: 80 ASFRPQYMIGSG-----NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
RP + + +G + D R++ P+ + G G + DL+ +
Sbjct: 144 TIVRPSHTVRTGLPIMMGDADV---MARRMLDGEPIIVAGDGHTPWTLTRSVDLAVPF-V 199
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ +AA + IF++ SDRA T D + K A+ G+ +IVH
Sbjct: 200 GLFGKQAALNEIFHITSDRAHTWDDIQKTIARLLGVEAKIVH 241
>gi|419782083|ref|ZP_14307894.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK610]
gi|383183724|gb|EIC76259.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK610]
Length = 326
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/238 (18%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V + + +G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 96 VLEACRETGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ ++ +K +P+ G G+Q ++ V +++
Sbjct: 152 KDYPDVPSIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGLQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAF 190
+ LA+E P+ AS ++N+ + + + + P+ P + I + F
Sbjct: 210 IRLALEAPQ-ASGEVYNITNGEPRAFKDLIEETLRGLDYPITYRKVPAPLLSVIASSLEF 268
Query: 191 PFRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 229
++ + EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 269 LYKVLKLKGEPALTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|240144730|ref|ZP_04743331.1| NAD-dependent epimerase/dehydratase family protein [Roseburia
intestinalis L1-82]
gi|257203251|gb|EEV01536.1| NAD-dependent epimerase/dehydratase family protein [Roseburia
intestinalis L1-82]
Length = 304
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI------ 88
+ +F+SSAG+Y + P E D + P + + V K + E ++ + Y I
Sbjct: 111 KIIFLSSAGVYGNPKQLPITEKDALAPISPY-GVHKQMGEELCSYYNRVHGYHIRCVRIF 169
Query: 89 ---GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL--SSMLTLAVENPEAAS 143
GSG K + + + + + G+G + + H+ D+ + L L + PE
Sbjct: 170 SAYGSGLRKQLLWDIYQKYLNTGRIDLFGTGNETRDFIHISDILRALELILGYQGPE--- 226
Query: 144 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 181
IFN+ + V++ +A++ A G +IV ++ +
Sbjct: 227 -EIFNVANGEEVSIRELAEIYAAQLGEKTDIVRFNGET 263
>gi|393767323|ref|ZP_10355872.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. GXF4]
gi|392727224|gb|EIZ84540.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. GXF4]
Length = 306
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGH----V 66
+RT N R +A+ A + V++F+F+SS A P V EGD +P + +
Sbjct: 85 YRTLNT-EATRKLAEAAARAKVRRFVFLSSIRAQVGASAPGVVGEGDEPRPTDAYGRSKL 143
Query: 67 QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM 117
+ E+ ++E +W + RP + G+G + R+ R P P+P G+
Sbjct: 144 EAERALAETGLDWVALRPVLVYGAGVKGNMAALL--RLARS-PYPLPLGGL 191
>gi|322373189|ref|ZP_08047725.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. C150]
gi|321278231|gb|EFX55300.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus
sp. C150]
Length = 326
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/238 (18%), Positives = 98/238 (41%), Gaps = 40/238 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V + + + +++ +++SS IY P D+ E D + + ++ YI ++ F
Sbjct: 96 VLEACREAKIERLVYVSSPSIYAAPRDQLGIKESDAPQEN----RLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ + +K +P+ G G Q ++ V +++
Sbjct: 152 KDYPDVSSVILRPRGLFGIGDTSILPRVL--NLSQKIGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAF 190
+ LA+E P+AA ++N+ + + + + G P+ P + I + F
Sbjct: 210 IRLALETPQAA-GEVYNITNGEPRAFRNLIEETLRGLGYPIRYRKIPAPLVSVISSSLEF 268
Query: 191 PFRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 229
++++ EP +A +D LG+R + E +++ ++Y K
Sbjct: 269 IYKSLKLKGEPALTRYTYYLLRYSQTLDISKAERD-LGYRPKITISEGIEQYVQDYRK 325
>gi|422523322|ref|ZP_16599334.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL053PA2]
gi|315078885|gb|EFT50903.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL053PA2]
Length = 353
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 91/244 (37%), Gaps = 42/244 (17%)
Query: 9 KALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP------- 61
+AL NN + + +GV + LF SSA IY +E E + P
Sbjct: 108 EALTYYGNNVGKTVALLKGMERNGVHRILFSSSASIYATDEEFKVTEESALDPGSPYATT 167
Query: 62 ---------DAGHVQVEKYISENFSNWASFRPQYMIGSGN-------NKDCEEWFFDRIV 105
DA H K +S + N P+ G K + W
Sbjct: 168 KFMVEFILRDAAHASDLKALSLRYFNPIGSDPKLRTGQQIEHPTHVLGKMIDAWMEGSTF 227
Query: 106 RKRPVPIP---GSGMQFTNIAHVRDLSSMLTLAVENPEAASSN----IFNLVSDRAVTLD 158
V P GSG++ + HV DL+ A+E+ + +++ +FN+ + VT+
Sbjct: 228 TVTGVDWPTRDGSGIR--DYIHVWDLARAHVAALEHLDEVTTDDPYQVFNIGTGSGVTVK 285
Query: 159 GMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE 218
+ K + G + +V+ P+ + Y R AKD+LGW + +
Sbjct: 286 ELVKAFEEGTGKSLNVVYGPPRPGDVAGA----------YTVSRRAKDLLGWSAELTQAD 335
Query: 219 DLKE 222
+++
Sbjct: 336 GIRD 339
>gi|225180903|ref|ZP_03734351.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT
1]
gi|225168384|gb|EEG77187.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT
1]
Length = 325
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F ++ + + P+ + G G Q ++ D+ A + PEA IFNL +R +
Sbjct: 195 FINQALARTPLTVHGDGAQTRCFTYIDDIVKATMEAGKRPEA-EGRIFNLGRERETPILE 253
Query: 160 MAKLCAQAAGLPVEIVHYDPK----AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN 215
+AK+ + +G EIV K ++ D ++ P + AA+ ILG+ +
Sbjct: 254 LAKMVLKVSGTEGEIVFQPYKEFYGSSYEDIRRRIP--------DLSAARQILGYNPSVT 305
Query: 216 LPEDLKERFEEY 227
L E ++E Y
Sbjct: 306 LEEGIRETLNWY 317
>gi|456862421|gb|EMF80975.1| GDP-L-fucose synthetase [Leptospira weilii serovar Topaz str.
LT2116]
Length = 316
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 95/242 (39%), Gaps = 38/242 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D VK+ +F+ S+ IY +P DE ++G + +
Sbjct: 83 SNLQIQNNIIDACYRFKVKKLVFLGSSCIYPKFAKQPMDEGQLLDGKLEPTNEPYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F + ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFHEAKIKDLPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVEN----PEAASSNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D++ +EN +A N+ S V++ +A+ +
Sbjct: 203 WGTGKPLREFLYSDDMARACVFLMENYDVTGDAKGGEHVNVGSGIEVSIRELAETVKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
G ++ +D +K +H +GWR L E ++ FE++
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWRHQVGLKEGIRLAFEDFK 311
Query: 229 KI 230
++
Sbjct: 312 QV 313
>gi|407366592|ref|ZP_11113124.1| NAD-dependent epimerase/dehydratase [Pseudomonas mandelii JR-1]
Length = 310
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 15/200 (7%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN 75
+NF V + +G+K+ +F SSA IY E + D K +K SE
Sbjct: 96 SNFVGTLNVCESMVKAGIKRVVFASSAAIYGNNGEGTAIHEDTPKSPLTPYASDKLASEQ 155
Query: 76 FSNW---------ASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN 121
+ ++ FR + G S F + ++ V I G G Q +
Sbjct: 156 YLDFYRREHGLEPMIFRFFNIFGPRQDPSSPYSGVISIFTKLALAEQSVAIFGDGSQTRD 215
Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 181
+V+DL S+L ++E E S N+ R+ +L+ + G P++++H+ P+
Sbjct: 216 FVYVQDLVSILVQSLEVSE-PSPGAVNVGLSRSTSLNDLIAELGTVTGSPLKVIHHAPRQ 274
Query: 182 AGIDAKKAFPFRNMHFYAEP 201
I +A R + + P
Sbjct: 275 GDIRHSRANNSRLLERFKLP 294
>gi|417916562|ref|ZP_12560139.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
mitis bv. 2 str. SK95]
gi|342829453|gb|EGU63807.1| NAD dependent epimerase/dehydratase family protein [Streptococcus
mitis bv. 2 str. SK95]
Length = 326
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 98/238 (41%), Gaps = 40/238 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V D + +G+++ +++SS IY P D+ E D + + + YI ++ F
Sbjct: 96 VLDACRETGIQRLVYVSSPSIYAAPRDQLAIKESDAPQEN----NLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ ++ +K +P+ G G Q ++ V +++
Sbjct: 152 KDYHDVPSIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAF 190
+ LA+E P+ AS ++N+ + + + + P+ P + I + F
Sbjct: 210 IRLALEAPQ-ASGEVYNITNGEPRAFKDLIEETLRGLDYPITYRKVPAPLLSVIASSLEF 268
Query: 191 PFRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 229
++ + EP +A +D LG+R ++ E +++ ++Y K
Sbjct: 269 LYKVLKLKGEPPLTRYTYYLLRYSQTLDISKAERD-LGYRPQISISEGIEQYVQDYRK 325
>gi|425466590|ref|ZP_18845888.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9809]
gi|389830855|emb|CCI26862.1| UDP-glucose 4-epimerase [Microcystis aeruginosa PCC 9809]
Length = 326
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHV--EGDVVKPDAGH----VQVEKYI----SENFSNWA 80
+GVK F+F+SS I+ A E ++ E PD+ + +Q E+ + ++ W
Sbjct: 107 AGVKHFIFVSS--IHAMAAESDNILNENSPCHPDSPYGRSKLQAEQALINLAKDSNMTWT 164
Query: 81 SFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIPGSGMQ-FTNIAHVRDLSSMLTLAVE 137
RP + G GN + DR+++ KR +P+P + ++ + V +L + ++
Sbjct: 165 ILRPTLVYGLGNRAN-----MDRLMKLIKRGLPLPFAAIKNRRSFVFVGNLVDAIITCLD 219
Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
+P AA+ IF + ++AV+ + +L AQ P ++
Sbjct: 220 HPNAANQ-IFLISDNQAVSTPQLIRLIAQQIQQPCRLL 256
>gi|448609537|ref|ZP_21660568.1| UDP-glucose 4-epimerase [Haloferax mucosum ATCC BAA-1512]
gi|445746554|gb|ELZ98015.1| UDP-glucose 4-epimerase [Haloferax mucosum ATCC BAA-1512]
Length = 313
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 18/134 (13%)
Query: 91 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI---F 147
G+ F D+ P+ + G G Q + V D+ A A +SN+ +
Sbjct: 182 GDYSGVIRIFVDQARSGTPITVEGDGTQTRDFVFVDDVVEANLCA-----ATTSNVGRAY 236
Query: 148 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI 207
N+ + V++ +A++ A IVH DP+ A I+ H AE AA+
Sbjct: 237 NVGTGERVSIRTLAEMIRDATDSDSRIVHRDPRPAAIE----------HSCAETSAARSD 286
Query: 208 LGWRSTTNLPEDLK 221
LG+RS +L + ++
Sbjct: 287 LGYRSEVSLSDGIE 300
>gi|421100128|ref|ZP_15560766.1| GDP-L-fucose synthetase [Leptospira borgpetersenii str. 200901122]
gi|410796831|gb|EKR98952.1| GDP-L-fucose synthetase [Leptospira borgpetersenii str. 200901122]
Length = 321
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 94/239 (39%), Gaps = 38/239 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D VK+ +F+ S+ IY +P DE ++G + +
Sbjct: 83 SNLQIQNNIIDACYRFKVKKLVFLGSSCIYPKFSKQPMDEGQLLDGKLEPTNEPYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F++ ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFYEAKIKDLPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVEN----PEAASSNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D++ +EN +A N+ S V++ +A+ +
Sbjct: 203 WGTGKPLREFLYSDDMARACVFLMENYDVTGDAKGGEHVNVGSGIEVSIRELAETVKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
G ++ +D +K +H +GW+ L E ++ FE++
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWKHQVELKEGIRLAFEDF 310
>gi|386720484|ref|YP_006186810.1| nucleotide sugar epimerase [Stenotrophomonas maltophilia D457]
gi|384080046|emb|CCH14649.1| Nucleotide sugar epimerase [Stenotrophomonas maltophilia D457]
Length = 321
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 77/207 (37%), Gaps = 22/207 (10%)
Query: 26 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV---------KPDAGHVQVEKYISENF 76
+ + GV+ ++ SS+ +Y + PP E V A + Y
Sbjct: 110 ELCRHRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMAYTYAQLYG 169
Query: 77 SNWASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
+ R + G D F R ++ RP+ + G + HV D+ S + A
Sbjct: 170 LHATGLRFFTVYGPWGRPDMAPLLFSRAVLAGRPIDVFNEGRMQRDFTHVSDIVSGILGA 229
Query: 136 VENPE--AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
+ +P +FNL + V L+ + QAAG P + V+ K P
Sbjct: 230 LAHPADGPVPHRVFNLGNHTPVELERFISVIEQAAGRPAQKVY----------KPMQPGD 279
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDL 220
+ A+ R A D G+ + T + E L
Sbjct: 280 MVRTMADTRRAHDAFGFDAVTPIEEGL 306
>gi|190576397|ref|YP_001974242.1| UDP-glucuronic acid epimerase [Stenotrophomonas maltophilia K279a]
gi|424670780|ref|ZP_18107803.1| hypothetical protein A1OC_04401 [Stenotrophomonas maltophilia
Ab55555]
gi|190014319|emb|CAQ47966.1| putative UDP-glucuronic acid epimerase [Stenotrophomonas
maltophilia K279a]
gi|401069957|gb|EJP78476.1| hypothetical protein A1OC_04401 [Stenotrophomonas maltophilia
Ab55555]
gi|456735325|gb|EMF60086.1| dTDP-glucose 4,6-dehydratase [Stenotrophomonas maltophilia EPM1]
Length = 321
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 77/207 (37%), Gaps = 22/207 (10%)
Query: 26 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV---------KPDAGHVQVEKYISENF 76
+ + GV+ ++ SS+ +Y + PP E V A + Y
Sbjct: 110 ELCRHRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMAYTYAQLYG 169
Query: 77 SNWASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
+ R + G D F R ++ RP+ + G + HV D+ S + A
Sbjct: 170 LHATGLRFFTVYGPWGRPDMAPLLFSRAVLAGRPIDVFNEGRMQRDFTHVSDIVSGILGA 229
Query: 136 VENPE--AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
+ +P +FNL + V L+ + QAAG P + V+ K P
Sbjct: 230 LAHPADGPVPHRVFNLGNHTPVELERFISVIEQAAGRPAQKVY----------KPMQPGD 279
Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDL 220
+ A+ R A D G+ + T + E L
Sbjct: 280 MVRTMADTRRAHDAFGFDAVTPIEEGL 306
>gi|430749917|ref|YP_007212825.1| nucleoside-diphosphate-sugar epimerase [Thermobacillus composti
KWC4]
gi|430733882|gb|AGA57827.1| nucleoside-diphosphate-sugar epimerase [Thermobacillus composti
KWC4]
Length = 337
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 19/161 (11%)
Query: 33 VKQFLFISSAGIY-KP-----ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF---- 82
KQ++FISSA Y KP E +E + + EK + + + F
Sbjct: 90 TKQYVFISSASAYQKPLRHYIITESTPLENPYWQYSRDKIACEKLLMDEHKA-SGFLVTI 148
Query: 83 -RPQY-----MIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
RP Y MI + N + W DR+ R +PV + G G + H D +
Sbjct: 149 VRPSYTYGDTMIPAAINSWEKPWSIVDRMRRGKPVIVHGDGTSLWTMTHNTDFAVGFAGL 208
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
+ PEA +++ SD +T + + + +AAG+ ++VH
Sbjct: 209 LGRPEAI-GEAYHITSDEVLTWNQIYEAIGRAAGIEPKLVH 248
>gi|414167836|ref|ZP_11424040.1| hypothetical protein HMPREF9696_01895 [Afipia clevelandensis ATCC
49720]
gi|410887879|gb|EKS35683.1| hypothetical protein HMPREF9696_01895 [Afipia clevelandensis ATCC
49720]
Length = 316
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 95/240 (39%), Gaps = 46/240 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEG---DVVKPD---------A 63
N + V A GV++ LF+ S+ IY K A +P + D ++P A
Sbjct: 89 NLLIATNVIHAAHEHGVEKLLFLGSSCIYPKLAPQPLREDSLLTDTLEPTNEPYAIAKIA 148
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G E Y + S++ S P + G G+N E ++R+ R V +
Sbjct: 149 GVKMAEAYRDQYGSDFISIMPTNLYGPGDNYHPEYSHVVAALIRRFHEAKETGAREVVVW 208
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
G+G +V D++ ++ + + N+ + +++ A++ A+ G E
Sbjct: 209 GTGTPRREFLYVDDMADASVHLMKT--YSEGGLINVGTGEDISIADFARVVAKTVGYTGE 266
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEYV 228
IV + G PR D+ GWR+TT+L + +K ++ Y+
Sbjct: 267 IVFDTSRPDGT----------------PRKLLDVGKLAAFGWRATTSLEDGMKRAYQAYL 310
>gi|417794063|ref|ZP_12441326.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK255]
gi|334271173|gb|EGL89567.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Streptococcus oralis SK255]
Length = 326
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 96/238 (40%), Gaps = 40/238 (16%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF 82
V D + G+++ +++SS IY P D+ E + + + YI ++ F
Sbjct: 96 VLDACREVGIQRLVYVSSPSIYAAPRDQLAIKESAAPQEN----NLNNYIRSKLASEKLF 151
Query: 83 -----------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
RP+ + G G+ ++ +K +P+ G G Q ++ V +++
Sbjct: 152 KDYPDVPSIILRPRGLFGIGDTSILPRVL--KLSQKIGIPLIGDGRQLMDMTCVENVALA 209
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAKKAF 190
+ LA+E P+ AS ++N+ + + + + G P+ + I + F
Sbjct: 210 IRLALEAPQ-ASGEVYNITNGEPRAFKDLIEETLRGLGYPITYRKVPASLLSAIASTLEF 268
Query: 191 PFRNMHFYAEP-------------------RAAKDILGWRSTTNLPEDLKERFEEYVK 229
++ +H EP +A +D LG+R ++ E + + ++Y K
Sbjct: 269 IYKILHLKGEPVLTRYTYYLLRYSQTLDISKAERD-LGYRPRISISEGIDQYVQDYRK 325
>gi|436834430|ref|YP_007319646.1| NAD-dependent epimerase/dehydratase [Fibrella aestuarina BUZ 2]
gi|384065843|emb|CCG99053.1| NAD-dependent epimerase/dehydratase [Fibrella aestuarina BUZ 2]
Length = 299
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 46/242 (19%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N ++ + A +GVK+ LF+ S+ IY K A +P P E +
Sbjct: 69 DNLIIEANIIHSAYQNGVKKLLFLGSSCIYPKMAPQPLKEDYLLSGFLEPTNEPYAIAKI 128
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPI 112
AG E Y S+ +N+ S P + G +N D + ++RK V +
Sbjct: 129 AGIKLCEAYRSQYGANFVSAMPTNLYGPNDNYDLQGSHVLPALIRKFHEAKVNNQEFVEV 188
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G F H DL+ + N + N+ + VT+ +A+L + G
Sbjct: 189 WGTGSPFREFMHADDLAEACVYLMNNYDG--EQFVNVGTGDEVTIKELAELVKETVGFEG 246
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
E+ K G PR D+ +G++ L E L ++++
Sbjct: 247 ELRWNTDKPDGT----------------PRKLMDVSRLHDMGYKHRIGLREGLAATYQDF 290
Query: 228 VK 229
+K
Sbjct: 291 LK 292
>gi|282163533|ref|YP_003355918.1| putative nucleotide sugar epimerase/dehydratase [Methanocella
paludicola SANAE]
gi|282155847|dbj|BAI60935.1| putative nucleotide sugar epimerase/dehydratase [Methanocella
paludicola SANAE]
Length = 306
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 90/227 (39%), Gaps = 27/227 (11%)
Query: 11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYK-----PADEPPHVEGDVVKPDAGH 65
LF NN + + A+ + +K+F++ SSA Y P DE H + + A
Sbjct: 86 LFDAQNNIIGTLNLLNAARKADIKRFVYFSSAATYGDPVRLPVDES-HPQEPLSPYGASK 144
Query: 66 VQVEKYISENFSNWA----SFRPQYMIGSGNNKDCEEW------FFDRIVRKRPVPIPGS 115
+ EKY + RP + I S + F D + + +P I G
Sbjct: 145 LAGEKYALMFHRAYGLPSTVIRP-FNIYSPRQDPSNPYSGVISKFMDSVSKGKPPVIFGD 203
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
G + V D+ +M+ L +EN AA FN + +D +A++ + G
Sbjct: 204 GSATRDFVSVHDVVNMVMLMLEN-SAAIGKAFNCGAGTKTRIDELARMVIRLYGKDSMRP 262
Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
P+ G D K + YA+ A+DILG+ L LKE
Sbjct: 263 ELLPERPG-DIKDS--------YADITLARDILGYSPKITLSAGLKE 300
>gi|347532736|ref|YP_004839499.1| NAD-dependent epimerase/dehydratase [Roseburia hominis A2-183]
gi|345502884|gb|AEN97567.1| NAD-dependent epimerase/dehydratase [Roseburia hominis A2-183]
Length = 307
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI------ 88
+ +F+SSAG+Y + P E DV P + + + K++ E + + Y I
Sbjct: 114 EIIFLSSAGVYGNPRQLPVRESDVAAPMSPY-GLHKHMGEELCEYYNRIHGYHIRSIRIF 172
Query: 89 ---GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM--LTLAVENPEAAS 143
G+G K + + + + G+G + + HV D+ L L+ + PEA
Sbjct: 173 SAYGNGLRKQLLWDIYQKYQNTGRIELFGTGEETRDFIHVSDIMRAIDLILSYDGPEA-- 230
Query: 144 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
+ N+ + V++ +A++ A+ G P IV ++
Sbjct: 231 --VINVANGEEVSIRELAEIYAEKLGAPQNIVSFN 263
>gi|338975459|ref|ZP_08630810.1| GDP-L-fucose synthetase [Bradyrhizobiaceae bacterium SG-6C]
gi|338231203|gb|EGP06342.1| GDP-L-fucose synthetase [Bradyrhizobiaceae bacterium SG-6C]
Length = 316
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 95/240 (39%), Gaps = 46/240 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEG---DVVKPD---------A 63
N + V A GV++ LF+ S+ IY K A +P + D ++P A
Sbjct: 89 NLLIATNVIHAAHEHGVEKLLFLGSSCIYPKLAPQPLREDSLLTDTLEPTNEPYAIAKIA 148
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G E Y + S++ S P + G G+N E ++R+ R V +
Sbjct: 149 GVKMAEAYRDQYGSDFISIMPTNLYGPGDNYHPEYSHVVAALIRRFHEAKETGAREVVVW 208
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
G+G +V D++ ++ + + N+ + +++ A++ A+ G E
Sbjct: 209 GTGTPRREFLYVDDMADASVHLMKT--YSEGGLINVGTGEDISIADFARVVAKTVGYTGE 266
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEYV 228
IV + G PR D+ GWR+TT+L + +K ++ Y+
Sbjct: 267 IVFDTSRPDGT----------------PRKLLDVGKLAAFGWRATTSLEDGMKRAYQAYL 310
>gi|418706888|ref|ZP_13267726.1| GDP-L-fucose synthetase domain protein [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418716864|ref|ZP_13276827.1| GDP-L-fucose synthetase domain protein [Leptospira interrogans str.
UI 08452]
gi|289451166|gb|ADC94080.1| GDP-fucose synthetase [Leptospira interrogans serovar Hebdomadis]
gi|410763465|gb|EKR34194.1| GDP-L-fucose synthetase domain protein [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410787635|gb|EKR81367.1| GDP-L-fucose synthetase domain protein [Leptospira interrogans str.
UI 08452]
Length = 318
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 93/241 (38%), Gaps = 38/241 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q V D K+ LF+ S+ IY +P DE ++G + V
Sbjct: 83 SNIQIQNNVIDACYRFKTKKLLFLGSSCIYPKFAKQPMDEGQLLDGKLEPTNEPYAVAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F++ ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFYEAKIKNLPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAA----SSNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D+ ++N + N+ S V++ +A+ +
Sbjct: 203 WGTGKPLREFLYSDDMGHACVFLMKNYDVTGDPKGGEHVNVGSGIEVSIRELAETIKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
G ++ +D +K +H +GW+ L E ++ FE+Y+
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWKHQVELKEGIRLAFEDYL 311
Query: 229 K 229
+
Sbjct: 312 R 312
>gi|55377093|ref|YP_134943.1| hypothetical protein rrnAC0171 [Haloarcula marismortui ATCC 43049]
gi|55229818|gb|AAV45237.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 359
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 86/219 (39%), Gaps = 32/219 (14%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV-------QVEKY-------------I 72
V +++ISS Y A+ P EG+ P AG E Y
Sbjct: 123 VGAYVYISSGAAYG-AERTPKREGET--PLAGCTAEQATTDSAETYGPRKAEGDREVFAA 179
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E+ S RP + G + + ++ DR+ V +P G+ +A+V D++S L
Sbjct: 180 AEDGVQAMSVRPTVVYGPYDYTERFAYWVDRVAEYDRVVVPSDGLSLWQMAYVEDVASAL 239
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKA 189
L E A + +N+ + A TL L A+ VE + + +AAG+ A
Sbjct: 240 RLVAERGTAGEA--YNVGDEHAPTLREWVDLLARVHETDVETIGVGERELRAAGL-APDD 296
Query: 190 FPFRNMHFYAEPRAAKDILGWRST---TNLPEDLKERFE 225
FP + A LGW ST T L + E E
Sbjct: 297 FPIYRDSPHLLSTAKLRGLGWSSTPHETALAVTVAEHLE 335
>gi|451345451|ref|YP_007444082.1| UDP-glucose 4-epimerase [Bacillus amyloliquefaciens IT-45]
gi|449849209|gb|AGF26201.1| UDP-glucose 4-epimerase [Bacillus amyloliquefaciens IT-45]
Length = 309
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 11/213 (5%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI 72
NF + V + G++ LF SS+ ++ + + P+ E P + + +Q E+Y+
Sbjct: 86 NFEGTKNVTEVCGELGIRTLLFSSSSEVFGDSPDFPYTETSRKLPKSAYGKAKLQSEEYL 145
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDL 128
E S+ R K E++ FF +P+ G G Q +++ D+
Sbjct: 146 REQASDKLHIRVVRYFNVYGPKQREDFVINKFFSLAENGSELPLYGDGGQIRCFSYISDI 205
Query: 129 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 188
+ LA+ + E A FN+ +D+ +T+ +A+ +G E +Y K G D +
Sbjct: 206 VTGTYLALIH-EGAVFEDFNIGNDQPITIKELAEKVNVLSGR--EKDNYLFKKLGEDGVR 262
Query: 189 AFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 221
AK +LG+ +L E L+
Sbjct: 263 GKDIEIFKRAPSIEKAKRLLGYAPKVSLNEGLE 295
>gi|288560644|ref|YP_003424130.1| NAD-dependent epimerase/dehydratase [Methanobrevibacter ruminantium
M1]
gi|288543354|gb|ADC47238.1| NAD-dependent epimerase/dehydratase [Methanobrevibacter ruminantium
M1]
Length = 331
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 26/216 (12%)
Query: 24 VADWAKSSGVKQFLFISSA-GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW--- 79
V +A+ +GV++F++ SS G+Y + P E D+ QV K + E ++N+
Sbjct: 111 VLQYAQLTGVERFVYSSSGCGVYGLDSKMPFEEHDISISLHTPYQVTKLLGELYTNYFHN 170
Query: 80 --------ASFRPQYMIGS--GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL- 128
A F + G G ++ FF + K+ +PI G G + + V D+
Sbjct: 171 LYDMPIVNARFFNVFGPGEVPGKYRNVIPNFFYWSMTKQALPITGDGTETRDWTFVGDIV 230
Query: 129 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 188
+ +L++ VE E A NL S + + MA Q G I + + DAK
Sbjct: 231 NGLLSMGVE--EEAIGEAINLGSGKDHRVIDMANKVNQLTGNEEGIAYVARR--NWDAKT 286
Query: 189 AFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
+ AKDILG++ T + + L+ +
Sbjct: 287 KL-------LSSIDKAKDILGYKPTVSFDDGLERVY 315
>gi|228912108|ref|ZP_04075826.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
200]
gi|228847535|gb|EEM92471.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL
200]
Length = 307
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 78/187 (41%), Gaps = 9/187 (4%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI 72
NF + + +G+++ LF SS+ +Y P E D+ P + + + E Y+
Sbjct: 85 NFEGTKNIVQVCTENGIEKLLFSSSSEVYGDGVSVPFKENDIKIPKSAYGKAKLMSEDYL 144
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDL 128
E SN R ++ + + + +++ + + I G G Q +++ D+
Sbjct: 145 KEYVSNSLKIRVVRYFNVYGSQQNDNFVISKFLKQAHSGKDITIYGDGQQIRCFSYISDI 204
Query: 129 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 188
+ LA E E + FN+ +++ ++++ +A + G +I D G+
Sbjct: 205 VNGTILAFE-YEGENFADFNIGNNKPISMEELAIKINELMGNKSKIKFLDLGEEGVRNSS 263
Query: 189 AFPFRNM 195
FR +
Sbjct: 264 IEIFRRI 270
>gi|145295826|ref|YP_001138647.1| hypothetical protein cgR_1751 [Corynebacterium glutamicum R]
gi|417971575|ref|ZP_12612498.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum S9114]
gi|140845746|dbj|BAF54745.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044057|gb|EGV39738.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum S9114]
Length = 329
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 39/222 (17%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
++N + D ++ GV +F S+A Y D P E +P + + I
Sbjct: 89 HDNVVTALTLLDAMRAHGVNNLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDY 148
Query: 75 NFSNWA--------SFRPQYMIGS----GNNKDCEEWFFDRIVRKRPV------------ 110
+++A S R + G+ G N++ E +++
Sbjct: 149 AITSYAAAFGLAATSLRYFNVAGAYGNIGENREVETHLIPLVLQVATGHREKIFMFGDDW 208
Query: 111 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG- 169
P P G + H+ DL+ LA+E+ EA IFNL S ++ + ++C + G
Sbjct: 209 PTP-DGTAVRDYIHILDLAKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGH 267
Query: 170 -LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 210
+P E+ P+ AG A A AK LGW
Sbjct: 268 PIPAEVA---PRRAGDPAT---------LIASSEKAKQELGW 297
>gi|448345960|ref|ZP_21534849.1| UDP-glucose 4-epimerase [Natrinema altunense JCM 12890]
gi|445633893|gb|ELY87080.1| UDP-glucose 4-epimerase [Natrinema altunense JCM 12890]
Length = 310
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
Query: 35 QFLFISSAGIYKPADEPPHVEGDVVKPDA----GHVQVEKYIS--ENFSNWASFRPQY-- 86
+F+F SSA +Y D P E +P + + E+Y+ + + ++ +Y
Sbjct: 119 RFVFASSAAVYGHPDTVPIPEDAPTEPTSPYGLSKLAAEQYVRLYADLYDLSAVVLRYFN 178
Query: 87 MIG----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
+ G G+ F D+ P+ + G G Q + H+ D+ LA + +A
Sbjct: 179 VYGPGQLDGDYSAVISVFVDQAANGDPITVEGDGSQTRDFVHIDDVVQANLLAAASEDAG 238
Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 189
+FN+ + +V++ +A++ G +IVH + ++ ID +A
Sbjct: 239 ---VFNVGTGESVSILELAEIVRDVIGSDSQIVHTESRSGDIDRSRA 282
>gi|395777032|ref|ZP_10457547.1| oxidoreductase [Streptomyces acidiscabies 84-104]
Length = 326
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 81 SFRPQYMIGSG-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
S P +++G G N D W+ + P+ IPG G + + H D++
Sbjct: 153 SLHPGHIVGPGWEPVNALGNLDPTVWY--TLSAGHPLKIPGIGAESMHHVHADDVAQSFE 210
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 165
A+++ +AA+ FN+V+ A+T+ G A + A
Sbjct: 211 RAIDHRDAAAGEDFNVVAPTALTVRGYANIAA 242
>gi|393775168|ref|ZP_10363482.1| putative NAD-dependent epimerase/dehydratase [Ralstonia sp. PBA]
gi|392717745|gb|EIZ05305.1| putative NAD-dependent epimerase/dehydratase [Ralstonia sp. PBA]
Length = 344
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 69 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRD 127
E ++ + +W FRP + G G D F R+ R P VP+ +G +F IA V D
Sbjct: 166 EAAVTMSMLDWTVFRPSVVFGPG---DSFLNLFARMQRFAPFVPLACAGARFQPIA-VED 221
Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 183
++ + A N E ++L + TL+ + +L QAAG P ++ P A G
Sbjct: 222 VAQAIVNAFGNAETI-HQCYDLGGPQVYTLEELVRLAGQAAGHPRPVMRL-PAALG 275
>gi|284043010|ref|YP_003393350.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684]
gi|283947231|gb|ADB49975.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684]
Length = 312
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F +R + P+ I G G Q +V DL+ A++ S ++NLVSDR V++
Sbjct: 182 FVERALAGEPLTIAGDGAQSRRFVYVEDLAEGAVRALQPCREDSCRVYNLVSDRDVSIRE 241
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A++ G EIV + A F + E RAA + LGW + T E
Sbjct: 242 IAEVVRDVVG-ETEIVFTPARTA--------DFGGVAVCGE-RAASE-LGWSARTPFEEG 290
Query: 220 LK 221
++
Sbjct: 291 VR 292
>gi|157363944|ref|YP_001470711.1| NAD-dependent epimerase/dehydratase [Thermotoga lettingae TMO]
gi|157314548|gb|ABV33647.1| NAD-dependent epimerase/dehydratase [Thermotoga lettingae TMO]
Length = 305
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 32 GVKQFLFISSAG-IYKPADEPPHVEGDVVKPD----------AGHVQVEKYISENFSNWA 80
GVK+F+F S+ G IY D P + + P+ + + +E Y +E N+
Sbjct: 109 GVKKFIFSSTGGAIY--GDNVPLPTNEAIGPNPASPYGIAKRSVEMYLEFYKNEKSLNYI 166
Query: 81 SFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
+ R + G + + E F R+++ V I G G + +V+D+ + LA+
Sbjct: 167 ALRYGNVYGPRQDPNGEAGVIAIFSSRMLKGEDVHIFGDGEYVRDYVYVKDVVTANLLAM 226
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 196
E + I+N+ + +++ + K+ + G + ++ P+ D +K+
Sbjct: 227 EKD---FTGIYNIGTGVGTSVNALFKMLSTITGYSKQPIYSSPRKG--DLRKSI------ 275
Query: 197 FYAEPRAAKDILGWRSTTNLPEDLKERFE 225
+ + A+ LGW T L + LK E
Sbjct: 276 --LDSKKAELELGWHPVTELSDGLKMTVE 302
>gi|448651334|ref|ZP_21680403.1| hypothetical protein C435_04803 [Haloarcula californiae ATCC 33799]
gi|445770861|gb|EMA21919.1| hypothetical protein C435_04803 [Haloarcula californiae ATCC 33799]
Length = 359
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 81/204 (39%), Gaps = 29/204 (14%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV-------QVEKY-------------I 72
V +++ISS Y A+ P EG+ P AG E Y
Sbjct: 123 VGAYVYISSGAAYG-AERTPKREGET--PLAGCTAEQATTDSAETYGPRKAEGDREVFAA 179
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
+E+ S RP + G + + ++ DR+ V +P G+ +A+V D++S L
Sbjct: 180 AEDGVQAMSVRPTVVYGPYDYTERFAYWVDRVAEYDRVVVPSDGLSLWQMAYVEDVASAL 239
Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV---HYDPKAAGIDAKKA 189
L E A + +N+ + A TL L A+ VE + + +AAG+ A
Sbjct: 240 RLVAERGTAGEA--YNVGDEHAPTLREWVDLLARVHETDVETIGVGERELRAAGL-APDD 296
Query: 190 FPFRNMHFYAEPRAAKDILGWRST 213
FP + A LGW ST
Sbjct: 297 FPIYRDSPHLLSTAKLRNLGWSST 320
>gi|288922380|ref|ZP_06416571.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f]
gi|288346287|gb|EFC80625.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f]
Length = 349
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 99/245 (40%), Gaps = 56/245 (22%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPA---------DEP---------PHVEG--------- 56
V + A+ +GV++ +F S+ +Y A +P PH +G
Sbjct: 95 VCEAARHAGVRRVIFASTVWVYGAAADPADLADRSDPSGGRIPPPSPHADGPEPDPLTED 154
Query: 57 -DVVKPDAGHVQ----------VEKYISENFSNWASFRPQYMIGSGNNKD-CEEWFFDRI 104
+V AGHV ++ Y+ + R G G ++ F +
Sbjct: 155 AQIVLARAGHVYTSTKLAAELLLQSYLQTYGLAFTILRYGIPYGPGMREELVLARFVNNA 214
Query: 105 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 164
+ RP+ + G G QF +VRDL+ LA+ + AA + L + V++ MA+
Sbjct: 215 MAGRPLTVAGDGRQFRKYVYVRDLADAHVLALAD--AAENTTIALEGNERVSVLEMAQ-A 271
Query: 165 AQAAGLPVEIVHYDPKAAGIDAKKAFP--FRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
QA Y P A I+ A P FR A+ RAA +LGWR TT + +++
Sbjct: 272 VQA---------YFPSVA-IERIPARPGDFRGREISAQ-RAAH-LLGWRPTTPFRDGVRQ 319
Query: 223 RFEEY 227
E Y
Sbjct: 320 YIEWY 324
>gi|92118513|ref|YP_578242.1| NAD-dependent epimerase/dehydratase [Nitrobacter hamburgensis X14]
gi|91801407|gb|ABE63782.1| NAD-dependent epimerase/dehydratase [Nitrobacter hamburgensis X14]
Length = 334
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 28/206 (13%)
Query: 33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS---------NWASFR 83
+++ + SSA +Y ADE P E + K +E ++ +FR
Sbjct: 118 IEKVVAASSASVYGLADEFPTTEHQNPYDNRTLYGAAKAFNEGLLRSFNDMYGLSYVAFR 177
Query: 84 PQYMIGSGNNKDCEEWFFDRIVR-------KRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
Y GN D + + ++R P I G G Q + H RD++ L
Sbjct: 178 --YFNVYGNRMDIHGRYTEVLIRWMERLEAGLPPTIFGDGRQTMDFVHARDVARANILGA 235
Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMH 196
+ AS +FN+ S +L +A+ + G P H P+ A + + P R
Sbjct: 236 K--AMASDEVFNIASGEETSLAQLARSLSSVMGHP----HLTPEFAPERSVNSVPRR--- 286
Query: 197 FYAEPRAAKDILGWRSTTNLPEDLKE 222
A A+ +LG+R+ +L E L E
Sbjct: 287 -LASTAKAERMLGFRAQVSLDEGLSE 311
>gi|421730201|ref|ZP_16169330.1| UDP-glucose 4-epimerase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407076167|gb|EKE49151.1| UDP-glucose 4-epimerase [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 309
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 11/213 (5%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQVEKYI 72
NF + V + G++ LF SS+ ++ + + P+ E P + + +Q E+Y+
Sbjct: 86 NFEGTKNVTEVCGELGIRTLLFSSSSEVFGDSPDFPYTETSRKLPKSAYGKAKLQSEEYL 145
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDL 128
E S+ R K E++ FF +P+ G G Q +++ D+
Sbjct: 146 REQASDKLHIRVVRYFNVYGPKQREDFVINKFFSLAENGSELPLYGDGGQIRCFSYISDI 205
Query: 129 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 188
+ LA+ + E A FN+ +D+ +T+ +A+ +G E +Y K G D +
Sbjct: 206 VTGTYLALIH-EGAVFEDFNIGNDQPITIKELAEKVNVLSGR--EKDNYLFKKLGEDGVR 262
Query: 189 AFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 221
AK +LG+ +L E L+
Sbjct: 263 GKDIEIFKRAPSIEKAKRLLGYAPKVSLNEGLE 295
>gi|390169741|ref|ZP_10221674.1| putative NAD-dependent epimerase/dehydratase [Sphingobium indicum
B90A]
gi|389587745|gb|EIM65807.1| putative NAD-dependent epimerase/dehydratase [Sphingobium indicum
B90A]
Length = 290
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 22/191 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN----- 78
+ D A +GV + + SSA Y P +PP + G+ K E ++
Sbjct: 99 LVDAAIRAGVGRIMQASSANAYAPTGQPPDERAPLFPGSRGYYLGSKVCQEIYAAERCRE 158
Query: 79 ----WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ R + G G P+ + G G ++ HV D++ + L
Sbjct: 159 EDVLLQTLRLASVYGPGQRSGALAAMAQAAASGGPIRVRGGGGFGADLIHVDDVARAMLL 218
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--------AAGIDA 186
+ + A + FN+ S T+ +A+L A+ G PV VH D + A ID
Sbjct: 219 LLGSENAGA---FNVGSGVRTTIAELAQLLAERTGAPV--VHDDGEGGEDWGFPALNIDR 273
Query: 187 KKAFPFRNMHF 197
+A +R M
Sbjct: 274 LRALGYRPMRL 284
>gi|269839811|ref|YP_003324504.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC
BAA-798]
gi|269791541|gb|ACZ43681.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC
BAA-798]
Length = 349
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 16/133 (12%)
Query: 109 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA 168
P+ + GSG Q + H+ D + AVE S+ N+ S + T +A + A+
Sbjct: 232 PLTVWGSGQQGRDFVHIDDCVEAMLRAVEVISDGSA--VNIGSGKLTTFLEVAAMFARLE 289
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV 228
G EI K G+ A+ YA+P A+ +LGW + + L+E F +
Sbjct: 290 GYEPEIKPLVDKPVGVQAR----------YADPSRARQLLGWAPSIS----LEEGFRRVL 335
Query: 229 KIGRDKKAMQFEI 241
+ R + A E+
Sbjct: 336 EAARRRHASPLEV 348
>gi|365961794|ref|YP_004943360.1| UDP-glucose 4-epimerase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365964039|ref|YP_004945604.1| UDP-glucose 4-epimerase [Propionibacterium acnes TypeIA2 P.acn17]
gi|365972984|ref|YP_004954543.1| UDP-glucose 4-epimerase [Propionibacterium acnes TypeIA2 P.acn33]
gi|365738475|gb|AEW82677.1| UDP-glucose 4-epimerase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365740720|gb|AEW80414.1| UDP-glucose 4-epimerase [Propionibacterium acnes TypeIA2 P.acn17]
gi|365742983|gb|AEW78180.1| UDP-glucose 4-epimerase [Propionibacterium acnes TypeIA2 P.acn33]
Length = 329
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 84/222 (37%), Gaps = 42/222 (18%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHVEGDVVKP----------------DAGHVQVEKYISE 74
+GV + LF SSA IY +E E + P DA H K +S
Sbjct: 106 NGVHRILFSSSASIYATDEESKVTEESALDPGSPYATTKFMVEFILRDAAHASDLKALSL 165
Query: 75 NFSNWASFRPQYMIGSGN-------NKDCEEWFFDRIVRKRPVPIP---GSGMQFTNIAH 124
+ N P+ G K + W V P GSG++ + H
Sbjct: 166 RYFNPIGSDPKLRTGQQIEHPTHVLGKMIDAWMEGSTFTVTGVDWPTRDGSGIR--DYIH 223
Query: 125 VRDLSSMLTLAVENPEAASSN----IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
V DL+ A+E+ + +++ +FN+ + VT+ + K + G + +V+ P+
Sbjct: 224 VWDLARAHVAALEHLDEVTTDDPYQVFNIGTGSGVTVKELVKAFEEGTGKSLNVVYGPPR 283
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
+ Y R AKD+LGW + + +++
Sbjct: 284 PGDVAGA----------YTVSRRAKDLLGWSAELTQADGIRD 315
>gi|406965297|gb|EKD90935.1| hypothetical protein ACD_30C00056G0012 [uncultured bacterium]
Length = 340
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA--S 81
+A AK +GVK+F++ SS IY A + E V P + + + + ++ A +
Sbjct: 99 LAKLAKKAGVKRFIYSSSCSIYGVAKDGLVDENSEVLPQTTYAKCKLLVEQDLKKLADNN 158
Query: 82 FRPQYMIGSGNNKDCEEWFFDRIVR--------KRPVPIPGSGMQFTNIAHVRDLSSMLT 133
F P YM + FD +V ++ + + G + + H+ D+
Sbjct: 159 FSPTYMRNATVFGASPRMRFDLVVNNLSGIAWTQKEIRLSSDGTPWRPLVHILDVCEAFL 218
Query: 134 LAVENPEAASSN-IFNLVS 151
+E PE N IFN+ S
Sbjct: 219 TVLEAPEKLVHNQIFNVGS 237
>gi|241518317|ref|YP_002978945.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240862730|gb|ACS60394.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 368
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R+ +P I G Q + HVRD++ LA+E P+ A ++ N+ S +A T+
Sbjct: 227 FASRLANGQPPMIFEDGEQRRDFVHVRDVARAFRLALEKPD-APGHVINIGSGQAYTITE 285
Query: 160 MAKLCAQAAGLP 171
+A L A A G+P
Sbjct: 286 VATLLADAMGVP 297
>gi|332667367|ref|YP_004450155.1| GDP-L-fucose synthase [Haliscomenobacter hydrossis DSM 1100]
gi|332336181|gb|AEE53282.1| GDP-L-fucose synthase [Haliscomenobacter hydrossis DSM 1100]
Length = 313
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 85/238 (35%), Gaps = 46/238 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N +Q V AK G+K+ LF+ S+ IY K A +P P E + A
Sbjct: 84 NLMIQNNVIHAAKEHGMKKLLFLGSSCIYPKLAPQPLKEEYLLSGFLEPTNEPYAIAKIA 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK---------RPVPIP 113
G E Y + N+ S P + G +N D ++RK V I
Sbjct: 144 GIKLCEAYRDQYGCNFISAMPTNLYGPNDNYDLHTSHVLPALIRKFHEAKINGDSTVEIW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
G+G HV DL+ + N AS N+ + +++ +A+L G E
Sbjct: 204 GTGKPLREFLHVDDLAEACLFLMLNYNEASH--INIGTGEDLSILELAELVRDIVGFIGE 261
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEE 226
I K G PR D+ LGW+ L E ++ + +
Sbjct: 262 IRLNTTKPDGT----------------PRKLLDVSKIHNLGWKHRIGLQEGIERTYHQ 303
>gi|296139544|ref|YP_003646787.1| UDP-glucose 4-epimerase [Tsukamurella paurometabola DSM 20162]
gi|296027678|gb|ADG78448.1| UDP-glucose 4-epimerase [Tsukamurella paurometabola DSM 20162]
Length = 327
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 83/220 (37%), Gaps = 33/220 (15%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
N + D ++GV + +F S+A Y + P E P + + I
Sbjct: 89 QGNVVTTLSLLDAMLAAGVPRLVFSSTAATYGEPESVPITEDARTAPTNTYGATKLAIDA 148
Query: 75 NFSNWA--------SFRPQYMIGS----GNNKDCEEWFFDRIVR-----KRPVPIPGS-- 115
+++A S R + GS G N++ E +++ + + + G+
Sbjct: 149 AITSYATAYGLAAVSLRYFNVAGSYAGIGENREVETHLIPLVLQTALGQRADIAVFGADY 208
Query: 116 ----GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
G + HV+DL+ LA+++ + +IFNL S ++ + C + GL
Sbjct: 209 PTADGTAVRDYVHVKDLADAHLLALDHARTGAHDIFNLGSGEGFSVRQVIDTCREVTGLE 268
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 211
+ V D +A A R A D LGWR
Sbjct: 269 IPEVAADRRAG----------DPAVLVASSRKAHDELGWR 298
>gi|428316327|ref|YP_007114209.1| UDP-glucuronate 4-epimerase [Oscillatoria nigro-viridis PCC 7112]
gi|428240007|gb|AFZ05793.1| UDP-glucuronate 4-epimerase [Oscillatoria nigro-viridis PCC 7112]
Length = 315
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 14 TNNNFRLQRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH----VQV 68
T N + + + AK++ +K+F+ SS+ +Y A+ P E +P + + +
Sbjct: 98 TERNINATQVILEAAKNAPQLKRFVLASSSSVYGNAETFPTSETACPQPVSPYGITKLAA 157
Query: 69 EKYISENFSNWA----SFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIA 123
E+ S + N+ R + G D FF I+R + I G G Q +
Sbjct: 158 ERLCSLYYHNFGVPATMLRYFTVYGPRQRPDMAFHIFFKSILRGEAISIYGDGQQTRDFT 217
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 183
+ D + A + PEA IFN+ V L + + P+ I +Y + G
Sbjct: 218 FISDCIAANVAAAKVPEAV-GEIFNIGGGSRVALAEVIHIMENIVDRPIRI-NYLQSSKG 275
Query: 184 IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
DA+ A+ A+ ILG+++ +L E L++ +E
Sbjct: 276 -DARDT--------SADVSKAQKILGYQAQVSLREGLRQEWE 308
>gi|322391247|ref|ZP_08064718.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus
peroris ATCC 700780]
gi|321145851|gb|EFX41241.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Streptococcus
peroris ATCC 700780]
Length = 327
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 24 VADWAKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQ---VEKYISEN-FSN 78
V + + +G+++ +++SS IY P D+ E D P+ ++ K SE F +
Sbjct: 97 VLEACRQTGIQRLVYVSSPSIYAAPRDQLGIKESDA--PEENNLNNYIRSKLASEKLFKD 154
Query: 79 WAS-----FRPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDLSS 130
+A RP+ + G G+ R++ +K +P+ G G Q ++ V +++
Sbjct: 155 YADVPSIILRPRGLFGIGDTS-----ILPRVINLSQKLGIPLIGDGRQLMDMTCVENVAL 209
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-AAGIDAKKA 189
+ LA+E E A ++N+ + + + + G P++ AGI +
Sbjct: 210 AIRLAIEALE-AKGEVYNITNGEPRAFRDLLEESLKGLGYPIKYRKLPASLLAGIASSLE 268
Query: 190 FPFRNMHFYAEP 201
F +++++ EP
Sbjct: 269 FLYKSLNLKGEP 280
>gi|387793267|ref|YP_006258332.1| nucleoside-diphosphate-sugar epimerase [Solitalea canadensis DSM
3403]
gi|379656100|gb|AFD09156.1| nucleoside-diphosphate-sugar epimerase [Solitalea canadensis DSM
3403]
Length = 308
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 92/240 (38%), Gaps = 46/240 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPDA 63
N +Q V + +GV++ +F+ S+ IY +P E + G + + A
Sbjct: 84 NLCIQNNVIHQSYLNGVEKLMFLGSSCIYPKLAPQPLKEEYLLTGLLESTNEPYAIAKIA 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW---------FFDRIVRKRP-VPIP 113
G E Y ++ N+ S P + G +N D E+ F + K+P V I
Sbjct: 144 GIKMCEAYRAQYGCNFISVMPTNLYGPNDNYDLEKSHVLPALIRKFHEAKKNKQPEVEIW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
G+G DL+ ++N + + N+ + +++ +A L G E
Sbjct: 204 GTGSPKREFLFADDLADACYYLMQNYDGV--DFLNIGTGHDLSIKELALLVKDIVGYEGE 261
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEYV 228
+ K G PR D+ LGW+ T LPE +K +++++
Sbjct: 262 LTFNTSKPDGT----------------PRKLMDVSKLHSLGWKHTIELPEGIKLAYQDFL 305
>gi|313206066|ref|YP_004045243.1| naD-dependent epimerase/dehydratase [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383485378|ref|YP_005394290.1| naD-dependent epimerase/dehydratase [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|386321950|ref|YP_006018112.1| NAD-dependent epimerase/dehydratase [Riemerella anatipestifer
RA-GD]
gi|416112083|ref|ZP_11593107.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Riemerella anatipestifer RA-YM]
gi|442314745|ref|YP_007356048.1| hypothetical protein G148_1050 [Riemerella anatipestifer RA-CH-2]
gi|312445382|gb|ADQ81737.1| NAD-dependent epimerase/dehydratase [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|315022379|gb|EFT35407.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Riemerella anatipestifer RA-YM]
gi|325336493|gb|ADZ12767.1| NAD-dependent epimerase/dehydratase [Riemerella anatipestifer
RA-GD]
gi|380460063|gb|AFD55747.1| naD-dependent epimerase/dehydratase [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|441483668|gb|AGC40354.1| hypothetical protein G148_1050 [Riemerella anatipestifer RA-CH-2]
Length = 336
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 9 KALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQ 67
K++++TN + + + A+ V+QFL++SS + A+E + E P H
Sbjct: 95 KSMYKTN--IQGTKNLLYIAEEKTVEQFLYVSSIAVLDAANEFEAIDEESNFNPKLAHSS 152
Query: 68 VEKYISENFSNWASFR------------PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS 115
IS++FS +R P +IGSGN + FD I +K P GS
Sbjct: 153 YA--ISKHFSEMEVWRASAEGMNVVVINPGVIIGSGNWEQSSGVLFDNI-KKLPFSFKGS 209
Query: 116 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
T VRD++ + AS F L+S+ ++ +A L + GL
Sbjct: 210 ----TGYVDVRDVADIAIKLFAEETKASGQRFILISENKTYIE-VANLVRKRLGLS 260
>gi|390938917|ref|YP_006402655.1| NAD-dependent epimerase/dehydratase [Desulfurococcus fermentans DSM
16532]
gi|390192024|gb|AFL67080.1| NAD-dependent epimerase/dehydratase [Desulfurococcus fermentans DSM
16532]
Length = 307
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 15/137 (10%)
Query: 14 TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS 73
T N + + + + + G+K+F+F+SSA +Y P P E D KP + V KY
Sbjct: 87 TKVNIEATQNLIELSITHGIKRFVFMSSASVYHPDTPEPVREEDAGKP-VSYYGVTKYAG 145
Query: 74 ENFSNW---------ASFRPQYMIGSGN----NKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
E +W + RP + G G + + +R + V + +
Sbjct: 146 ELIGSWYYRKGLIDFRALRPTVVFGPGRFRGPSAEYSSMIIERALNNEKVIVKNPNDR-V 204
Query: 121 NIAHVRDLSSMLTLAVE 137
N +VRD S L L E
Sbjct: 205 NYIYVRDAVSALILLAE 221
>gi|398925595|ref|ZP_10661969.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM48]
gi|398171956|gb|EJM59844.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM48]
Length = 309
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 22/186 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ LF SSA +Y E ++ D K +K E
Sbjct: 95 QSNFIGTLNVCEAMRQAGVKRVLFASSAAVYGNNGEGESIDEDTPKAPLTPYAADKLAGE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
++ ++ +R Q+ + G +D F +R + P+ + G G Q
Sbjct: 155 HYFDF--YRRQHGLEPVIFRFFNIYGPRQDPSSPYSGVISIFSERAQKGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHY 177
+ +V DL +L A+E P + N+ ++A TL M + G LP V Y
Sbjct: 213 TRDFVYVEDLVDLLVQAIEKPRVEDGAV-NVGWNQATTLKQMLEALEAVVGQLPS--VSY 269
Query: 178 DPKAAG 183
P +G
Sbjct: 270 GPARSG 275
>gi|354583218|ref|ZP_09002118.1| NAD-dependent epimerase/dehydratase [Paenibacillus lactis 154]
gi|353198635|gb|EHB64105.1| NAD-dependent epimerase/dehydratase [Paenibacillus lactis 154]
Length = 305
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 27/215 (12%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS---------N 78
+ +GV++F++ S+AG+Y ++P E D + P + + + K + E++
Sbjct: 103 CRKAGVRKFVYASTAGVYGDLEKPELHETDPLSPISFYA-LSKMVGEHYVRLYHRFFGLT 161
Query: 79 WASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
+ R + G G E F R+++K P+ I G G Q + V+D+
Sbjct: 162 YTILRYGNVYGPGQTPKGEGGVVAVFGARLLQKLPLHIYGDGSQTRDFIFVKDVVEANLA 221
Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 194
A+ + I ++ + + ++ + +L P+ I ++ K I
Sbjct: 222 AIHH---GDQEILHVSTGSSQPINHLVELIRCNHPEPIHIEYHPAKPGDI---------- 268
Query: 195 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
+H A++IL W L E + E + +V+
Sbjct: 269 VHSCLNNSRAREILEWYPRYRLEEGIAETYHSWVQ 303
>gi|158338858|ref|YP_001520035.1| NAD dependent epimerase/dehydratase family protein [Acaryochloris
marina MBIC11017]
gi|158309099|gb|ABW30716.1| NAD dependent epimerase/dehydratase family protein [Acaryochloris
marina MBIC11017]
Length = 291
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 9/132 (6%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD-AGHVQVEKYISENF-SNWAS 81
+ D+A SG K+F++ SS G+Y H +V GH K E ++AS
Sbjct: 98 LLDYAFKSGAKKFIYASSGGVYGNGPIAFHENSSIVSHQKLGHYLGSKVCGEVLVQSYAS 157
Query: 82 ------FRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
RP +M G+ + D +V RP+ + G N HVRD+ ++
Sbjct: 158 IFDVIILRPFFMYGANQRRTMLIPRLVDCVVEGRPIILQGKDGIRINPVHVRDVVDVIKF 217
Query: 135 AVENPEAASSNI 146
+ + + + N+
Sbjct: 218 CLTSSGSLTLNV 229
>gi|15616277|ref|NP_244582.1| UDP-glucose 4-epimerase (galactowaldenases) [Bacillus halodurans
C-125]
gi|10176339|dbj|BAB07434.1| UDP-glucose 4-epimerase (galactowaldenases) [Bacillus halodurans
C-125]
Length = 282
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 18 FRLQRPVA----DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-KPDAGH----VQV 68
F++ R VA AK G+KQF+F+SS +Y E ++ D + KP + + +Q
Sbjct: 71 FKVNRDVAYEAAKKAKDEGIKQFIFLSSMSVY--GKENGIIDLDTLPKPTSNYGESKLQA 128
Query: 69 EKYIS---ENFSNWASFRPQYMIGSGNNKDCEEWF--FDRIVRKRPVPIPGSGMQFTNIA 123
EK I ++ + RP + G G C+ + ++ RK PV P + + I
Sbjct: 129 EKLIEMLDDDSFKVVTIRPPMIYGKG----CKGNYPKLAKLARKLPV-FPDVENERSMI- 182
Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY 177
H+ +L + L ++N +A +F +D V M +L + G +++ +
Sbjct: 183 HIENLCEFMKLIIDNNDAG---LFLPQNDDFVKTSEMVRLIGETNGKRIKLTKF 233
>gi|389799275|ref|ZP_10202273.1| NAD-dependent epimerase/dehydratase [Rhodanobacter sp. 116-2]
gi|388443266|gb|EIL99423.1| NAD-dependent epimerase/dehydratase [Rhodanobacter sp. 116-2]
Length = 258
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 23/204 (11%)
Query: 35 QFLFISSAG-IYKPADEPPHVEGDVVKPDAGH----VQVEKYIS---ENFSNWASF-RPQ 85
+ L++SS G +Y + P E V+P + H V E I+ + + A+ RP
Sbjct: 58 KLLYLSSGGSLYAATSDDPSTETSPVQPRSYHGAAKVAAECLITAWCQQYEGQATLLRPS 117
Query: 86 YMIGSGNNK----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
+ G G + F ++VR + + G G + ++ D + + +P
Sbjct: 118 NIYGPGQLERPGFGIVPACFGKLVRGETLRVWGDGSIVRDYLYIDDFVDLCLAILSSPMP 177
Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
A + + N S V+L+ + + + G P+ H + +DA++ +
Sbjct: 178 AGARVLNASSGTGVSLNELFRTVEKVTGTPLLRSHELDRP--VDARQ--------IVMDS 227
Query: 202 RAAKDILGWRSTTNLPEDLKERFE 225
A+D GW T L E LK+ ++
Sbjct: 228 AMARDRYGWIPATPLEEGLKKTWD 251
>gi|418721926|ref|ZP_13281097.1| GDP-L-fucose synthetase [Leptospira borgpetersenii str. UI 09149]
gi|418737974|ref|ZP_13294370.1| GDP-L-fucose synthetase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410741236|gb|EKQ89992.1| GDP-L-fucose synthetase [Leptospira borgpetersenii str. UI 09149]
gi|410746148|gb|EKQ99055.1| GDP-L-fucose synthetase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 314
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 94/239 (39%), Gaps = 38/239 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D VK+ LF+ S+ IY +P DE ++G + +
Sbjct: 83 SNLQIQNNIIDACYRFKVKKLLFLGSSCIYPKFAKQPMDEGQLLDGKLEPTNEPYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F++ ++ P V +
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFYEAKIKDLPEVVV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVEN----PEAASSNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D++ ++N +A N+ S V++ +A+ +
Sbjct: 203 WGTGKPLREFLYSDDMARACVFLMKNYDVTGDAKGGEHVNVGSGIEVSIRELAETVKEVV 262
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
G ++ +D +K +H +GW+ L E ++ FE++
Sbjct: 263 GYQ-GLLTFDLTKPDGTPRKLLDVSKLH----------KMGWKHQVELKEGIRLAFEDF 310
>gi|424877011|ref|ZP_18300670.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393164614|gb|EJC64667.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 368
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F R+ +P I G Q + HVRD++ LA+E P +A ++ N+ S +A T+
Sbjct: 227 FASRLANGQPPMIFEDGEQRRDFVHVRDVARAFRLALEKP-SAPGHVINIGSGQAYTIAE 285
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 210
+A L A A G+P P+ ++ ++ RN +AE A+++LG+
Sbjct: 286 VATLLADAMGVP----EIRPEI--MNKARSGDIRNC--FAEIAKARELLGF 328
>gi|320547073|ref|ZP_08041370.1| nucleoside-diphosphate-sugar epimerase [Streptococcus equinus ATCC
9812]
gi|320448279|gb|EFW89025.1| nucleoside-diphosphate-sugar epimerase [Streptococcus equinus ATCC
9812]
Length = 219
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 14/178 (7%)
Query: 36 FLFISSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWASFRPQYMI 88
++ ISS+ +Y P +E + + + EK + E + RP Y+
Sbjct: 45 YIMISSSSVYPDDGAQPFLETSQLGDNKFWGQYGLDKIAAEKQLLELVPDAYILRPPYLY 104
Query: 89 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 148
G NN E + FD P +P G +++DL M+ +EN +++N
Sbjct: 105 GPMNNVYREAFVFDCAEDDLPSYLPRKGELKLQFFYIKDLCRMMEKIIEN--QPKEHLYN 162
Query: 149 LVSDRAVTLDGMAKLC-AQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK 205
+ + A+++ KLC A + +P I +D ++ + F F + F+ + K
Sbjct: 163 VGNSEAISVRQWVKLCYACSNKIPEFIGVFDE----VNRRNYFSFYDYEFFLDVERKK 216
>gi|422426802|ref|ZP_16503720.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL087PA1]
gi|422432287|ref|ZP_16509157.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL059PA2]
gi|422434684|ref|ZP_16511542.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL083PA2]
gi|422442412|ref|ZP_16519215.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL002PA1]
gi|422446196|ref|ZP_16522941.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL027PA1]
gi|422450464|ref|ZP_16527181.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL030PA2]
gi|422452843|ref|ZP_16529539.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL087PA3]
gi|422499997|ref|ZP_16576253.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL063PA2]
gi|422511130|ref|ZP_16587273.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL059PA1]
gi|422538748|ref|ZP_16614622.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL013PA1]
gi|422541535|ref|ZP_16617393.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL037PA1]
gi|422546109|ref|ZP_16621936.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL050PA3]
gi|422556877|ref|ZP_16632624.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL025PA2]
gi|422562103|ref|ZP_16637781.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL046PA1]
gi|422570912|ref|ZP_16646507.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL067PA1]
gi|422577849|ref|ZP_16653378.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL005PA4]
gi|313764949|gb|EFS36313.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL013PA1]
gi|313815490|gb|EFS53204.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL059PA1]
gi|313829056|gb|EFS66770.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL063PA2]
gi|314916286|gb|EFS80117.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL005PA4]
gi|314921888|gb|EFS85719.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL050PA3]
gi|314930847|gb|EFS94678.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL067PA1]
gi|314955226|gb|EFS99631.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL027PA1]
gi|314959230|gb|EFT03332.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL002PA1]
gi|314969319|gb|EFT13417.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL037PA1]
gi|315099696|gb|EFT71672.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL059PA2]
gi|315102070|gb|EFT74046.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL046PA1]
gi|315109792|gb|EFT81768.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL030PA2]
gi|327454321|gb|EGF00976.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL087PA3]
gi|327456386|gb|EGF03041.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL083PA2]
gi|328756081|gb|EGF69697.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL087PA1]
gi|328758459|gb|EGF72075.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL025PA2]
Length = 353
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 84/222 (37%), Gaps = 42/222 (18%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHVEGDVVKP----------------DAGHVQVEKYISE 74
+GV + LF SSA IY +E E + P DA H K +S
Sbjct: 130 NGVHRILFSSSASIYATDEESKVTEESALDPGSPYATTKFMVEFILRDAAHASDLKALSL 189
Query: 75 NFSNWASFRPQYMIGSGN-------NKDCEEWFFDRIVRKRPVPIP---GSGMQFTNIAH 124
+ N P+ G K + W V P GSG++ + H
Sbjct: 190 RYFNPIGSDPKLRTGQQIEHPTHVLGKMIDAWMEGSTFTVTGVDWPTRDGSGIR--DYIH 247
Query: 125 VRDLSSMLTLAVENPEAASSN----IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
V DL+ A+E+ + +++ +FN+ + VT+ + K + G + +V+ P+
Sbjct: 248 VWDLARAHVAALEHLDEVTTDDPYQVFNIGTGSGVTVKELVKAFEEGTGKSLNVVYGPPR 307
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
+ Y R AKD+LGW + + +++
Sbjct: 308 PGDVAGA----------YTVSRRAKDLLGWSAELTQADGIRD 339
>gi|189425807|ref|YP_001952984.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
gi|189422066|gb|ACD96464.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
Length = 321
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 43/246 (17%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N +Q V A +GV++ LF+ S IY K A +P P + +
Sbjct: 83 DNLMIQTNVIHEAWKNGVQRLLFLGSTCIYPKFAPQPIRETDLLTSPLEPSNDAYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRK--------RP-VPI 112
AG VQ Y + + + + P + G G+N D ++RK P V +
Sbjct: 143 AGIVQCRTYNQQYGTRFLAAMPNNLYGPGDNYDLTGSHVLPALLRKFHEAKQSGSPNVTV 202
Query: 113 PGSGMQFTNIAHVRDL--SSMLTLAVENP-------EAASSNIFNLVSDRAVTLDGMAKL 163
G+G HV DL +S+ + +++ + + + N+ S + +++ +A++
Sbjct: 203 WGTGTPLREFMHVDDLADASLFLMLLDDGCYEELLMYSDAPALINVGSGQEISIANLARM 262
Query: 164 CAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 223
Q G E+V K G K A R +H LGW+ L + +++
Sbjct: 263 VQQVVGFEGELVFDTDKPDGTPRKLADSSR-LH----------ALGWKHRIELEDGVRDA 311
Query: 224 FEEYVK 229
+ +V+
Sbjct: 312 YRWFVE 317
>gi|152984173|ref|YP_001346419.1| putative epimerase [Pseudomonas aeruginosa PA7]
gi|452878670|ref|ZP_21955860.1| putative epimerase [Pseudomonas aeruginosa VRFPA01]
gi|150959331|gb|ABR81356.1| probable epimerase [Pseudomonas aeruginosa PA7]
gi|452184682|gb|EME11700.1| putative epimerase [Pseudomonas aeruginosa VRFPA01]
Length = 309
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 15/189 (7%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF + + + GV++ +F SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIATLNLCEAMREQGVRRVVFASSAAVYGQNGEGSAIDEDTPKSPLTPYASDKLASE 154
Query: 75 NFSNW---------ASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
+ ++ A FR + G S F +R ++ P+ + G G Q
Sbjct: 155 YYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTPITVFGDGEQTR 214
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
+ +V DL L A+E +A S N+ +RA +L + Q G + H + +
Sbjct: 215 DFIYVADLVDFLVQALE-AQAVESGAVNVGLNRATSLKQLLAEIGQVLGGLPPVSHAEAR 273
Query: 181 AAGIDAKKA 189
A I +A
Sbjct: 274 AGDIKHSRA 282
>gi|427702489|ref|YP_007045711.1| nucleoside-diphosphate-sugar epimerase [Cyanobium gracile PCC 6307]
gi|427345657|gb|AFY28370.1| nucleoside-diphosphate-sugar epimerase [Cyanobium gracile PCC 6307]
Length = 322
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 91/244 (37%), Gaps = 46/244 (18%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVE---GDVVKPDAGHVQVEKY 71
+N ++Q+ V + A G ++ LF+ S+ IY K A++P E G ++P + K
Sbjct: 85 DNLKIQQNVIESAWQHGTRRLLFLGSSCIYPKLAEQPIREEALLGGPLEPTNEWYAIAKI 144
Query: 72 ISENFS---------NWASFRPQYMIGSGNN-KDCEEWFFDRIVRK---------RPVPI 112
+ S P + G G+N ++R+ V
Sbjct: 145 TGIELCRALRLQHGFDAISLMPTNLYGPGDNYHPTNSHVLPGLIRRFQEARENGTEEVVC 204
Query: 113 PGSGMQFTNIAHVRDLS--SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 170
GSG HV DL+ ++ L P A N+ + V++ +A + A+A G
Sbjct: 205 WGSGSPRREFLHVDDLADAALFCLRHWQPGAEELQHINVGTGTDVSIKDLATMVAEAVGF 264
Query: 171 PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFE 225
I K G PR D+ LGWR+T LP+ L+
Sbjct: 265 RGRIAWDTSKPDGT----------------PRKLLDVGRLAALGWRATIPLPDGLRRTVA 308
Query: 226 EYVK 229
E+V
Sbjct: 309 EFVS 312
>gi|418292867|ref|ZP_12904797.1| epimerase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064280|gb|EHY77023.1| epimerase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 309
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 19/194 (9%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 83
+ + + +GVK+ LF SSA +Y E ++ D K +K SE++ ++ +R
Sbjct: 103 LCEAMREAGVKRVLFASSAAVYGNNGEGQAIDEDTPKAPLTPYAADKLASEHYLDF--YR 160
Query: 84 PQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD 127
Q+ + G +D F +R + P+ + G G Q + +V D
Sbjct: 161 RQHGLEPVVFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIAVFGDGEQTRDFLYVAD 220
Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 187
L +L A+E+PEA + N+ ++A +L+ + G E+ + + I
Sbjct: 221 LVEVLVQALESPEAPEGAV-NVGLNQATSLNQLLGAIGDVLGGLPEVSYQAARQGDIRHS 279
Query: 188 KAFPFRNMHFYAEP 201
+A R + Y P
Sbjct: 280 RANNARLLQRYRLP 293
>gi|350268937|ref|YP_004880245.1| putative nucleotide sugar epimerase/dehydratase [Oscillibacter
valericigenes Sjm18-20]
gi|348593779|dbj|BAK97739.1| putative nucleotide sugar epimerase/dehydratase [Oscillibacter
valericigenes Sjm18-20]
Length = 321
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGN-NKDCEEWFFDRIVRKRPVPIPGSGMQFTN 121
AG Y E S RP + G G + F R ++ + + G G Q +
Sbjct: 161 AGEHLAHSYYEEYRLPVVSVRPFNIYGPGQVGEGAIHQFVVRAIQNEEICVHGEGDQIRS 220
Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA-VTLDGMAKLCAQAAGLPVEIVHYDPK 180
++ DL S L L +E EA + FN+ + R +T+ +A+L + A ++ Y PK
Sbjct: 221 WCYIDDLVSGLLLCMERKEAIG-DFFNIGNPRGTITVSMLAQLVRKIAN-SSSVIRYVPK 278
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
+D + P A+ LG++ +LP LK+ E Y
Sbjct: 279 TY-VDVELRIP--------SIEKARTKLGYQPVFDLPSGLKKTIEWY 316
>gi|296114230|ref|ZP_06832885.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter hansenii ATCC
23769]
gi|295979306|gb|EFG86029.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter hansenii ATCC
23769]
Length = 356
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 105 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 164
V +P+P+ G+G + V D + L LAVE + +R ++ + LC
Sbjct: 208 VEGKPLPVYGAGQNIRDWLFVEDHAEALVLAVEQGRPGETYAIGARQER-TNMEVVQALC 266
Query: 165 AQAAGLPVEIVHYDP---KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK 221
A ++ +H DP A I + P + + +P A+++LGWR+ + + L+
Sbjct: 267 A-----ILDELHPDPTGPHARLIHHVQDRPGHDFRYAIDPSHAENMLGWRARHSFEQGLR 321
Query: 222 ERFEEYV 228
+ + Y+
Sbjct: 322 KTIQWYL 328
>gi|421088627|ref|ZP_15549448.1| GDP-L-fucose synthetase domain protein [Leptospira kirschneri str.
200802841]
gi|410002608|gb|EKO53124.1| GDP-L-fucose synthetase domain protein [Leptospira kirschneri str.
200802841]
Length = 318
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 94/244 (38%), Gaps = 48/244 (19%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKPD 62
+N ++Q + D K+ LF+ S+ IY +P DE ++G + V
Sbjct: 83 SNLQIQNNIIDACYRFKTKKLLFLGSSCIYPKFARQPMDEGQLLDGKLEPTNEPYAVAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPI 112
AG V + Y + +N+ S P + G G+N E F++ ++ P V I
Sbjct: 143 AGIVMCQSYNRQYGTNFISVMPTNLYGPGDNYHPENSHVLPALIRRFYEAKIKNLPEVII 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAA----SSNIFNLVSDRAVTLDGMAKLCAQAA 168
G+G + D++S ++N + N+ S V++ +A++
Sbjct: 203 WGTGKPLREFLYSDDMASACVFLMKNYDVTGDPKGGEHVNVGSGIEVSIRELAEVVK--- 259
Query: 169 GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKER 223
E+V Y + F PR D+ +GW+ L E ++
Sbjct: 260 ----EVVEY---------QGLLTFDLTKPDGTPRKLLDVSKLHKMGWKHQVELKEGIRLA 306
Query: 224 FEEY 227
FE+Y
Sbjct: 307 FEDY 310
>gi|422550525|ref|ZP_16626322.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL050PA1]
gi|314917555|gb|EFS81386.1| UDP-glucose 4-epimerase [Propionibacterium acnes HL050PA1]
Length = 353
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 84/222 (37%), Gaps = 42/222 (18%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHVEGDVVKP----------------DAGHVQVEKYISE 74
+GV + LF SSA IY +E E + P DA H K +S
Sbjct: 130 NGVHRILFSSSASIYATDEESKVTEESALDPGSPYATTKFMVEFILRDAAHASDLKALSL 189
Query: 75 NFSNWASFRPQYMIGSGN-------NKDCEEWFFDRIVRKRPVPIP---GSGMQFTNIAH 124
+ N P+ G K + W V P GSG++ + H
Sbjct: 190 RYFNPIGSDPKLRTGQQIEHPTHVLGKMIDAWMEGSTFTVTGVDWPTRDGSGIR--DYIH 247
Query: 125 VRDLSSMLTLAVENPEAASSN----IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
V DL+ A+E+ + +++ +FN+ + VT+ + K + G + +V+ P+
Sbjct: 248 VWDLARAHVAALEHLDEVTTDDPYQVFNIGTGSGVTVKELVKAFEEGTGKSLNVVYGPPR 307
Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
+ Y R AKD+LGW + + +++
Sbjct: 308 PGDVAGA----------YTVSRRAKDLLGWSAELTQADGIRD 339
>gi|167841169|ref|ZP_02467853.1| NAD-dependent epimerase/dehydratase [Burkholderia thailandensis
MSMB43]
gi|424904456|ref|ZP_18327966.1| NAD-dependent epimerase/dehydratase [Burkholderia thailandensis
MSMB43]
gi|390930434|gb|EIP87836.1| NAD-dependent epimerase/dehydratase [Burkholderia thailandensis
MSMB43]
Length = 329
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 83/211 (39%), Gaps = 30/211 (14%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP------DAGHVQVEKYISENFSNWA- 80
A+ G+++F+F SS + P H E + P A + E Y S +
Sbjct: 120 ARRHGIRRFVFASSGASTGEVEPPIHEE---IAPRPASPYGASKLAGEAYASAYKHAFGI 176
Query: 81 -----SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA 135
F Y GS F + + P+ I G G Q + ++ DL + LA
Sbjct: 177 DTVMLRFGNVYGPGSARKSSVIAKFIRAALVQMPLEIHGDGSQTRDFIYIDDLVDAVMLA 236
Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQA---AGLP-VEIVHYDPKAAGIDAKKAFP 191
P+ +F + S T+D +A A+A AG+ + + D A G+ +
Sbjct: 237 SIVPD-IGGEVFQIASGAETTIDELAVRLARALERAGIRNLRVTRTDAYAQGVRRR---- 291
Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
+++ A+ +LGW+ L E L+E
Sbjct: 292 ------FSDTTKARVLLGWQPKVTLEEGLQE 316
>gi|434394389|ref|YP_007129336.1| dTDP-glucose 4,6-dehydratase [Gloeocapsa sp. PCC 7428]
gi|428266230|gb|AFZ32176.1| dTDP-glucose 4,6-dehydratase [Gloeocapsa sp. PCC 7428]
Length = 336
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F ++I+ R + I G G+Q + ++ D + + A+ PE A+ IFN+ SDR +++
Sbjct: 197 FIEQILSDREIQIHGDGLQTRSFTYISDTVAGIYAAIIKPE-ANGEIFNIGSDREISILN 255
Query: 160 MAKLCAQAAGLP 171
+AK + + P
Sbjct: 256 LAKTIKRLSDTP 267
>gi|148545786|ref|YP_001265888.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida F1]
gi|148509844|gb|ABQ76704.1| NAD-dependent epimerase/dehydratase [Pseudomonas putida F1]
Length = 310
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + GV++ LF SSA +Y E + D K V+K SE
Sbjct: 95 QSNFIGTLNVCEAMRVHGVRRVLFASSAAVYGNNGEGESISEDTPKAPLTPYAVDKLASE 154
Query: 75 NFSNWASFRPQYMIGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSGMQ 118
+ ++ +R Q+ + G +D F +R+V+ P+ + G G Q
Sbjct: 155 QYLDF--YRRQHGLEPVVFRFFNIFGPRQDPSSPYSGVISIFCERVVQGLPITVFGDGEQ 212
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD 158
+ +V DL ++ A+E P+ + N+ ++A +L+
Sbjct: 213 TRDFLYVGDLVQVMVQALEQPQVEEGAV-NIGLNQATSLN 251
>gi|313896782|ref|ZP_07830330.1| NAD dependent epimerase/dehydratase family protein [Selenomonas sp.
oral taxon 137 str. F0430]
gi|312974699|gb|EFR40166.1| NAD dependent epimerase/dehydratase family protein [Selenomonas sp.
oral taxon 137 str. F0430]
Length = 328
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 16/170 (9%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-------NWA 80
A ++ VK+F++ SS+ +Y P E D+V V KY++E ++
Sbjct: 122 AAAAHVKKFVYASSSAVYGDDQTMPKRE-DIVGRRLSTYAVTKYVAEEYAVQYTMHYGLD 180
Query: 81 SFRPQYMIGSGNNKDCEEW-------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
+ +Y G +D F + ++ RP + G G Q + +V D+
Sbjct: 181 CYGMRYFNVYGRRQDPNGAYAAVIPKFVEALLHDRPPIVNGDGEQSRDFVYVEDVVQANL 240
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG 183
LA P A+ +N+ S +L+ M + + G + V Y P+ AG
Sbjct: 241 LACAAPHEAAGEAYNIASGTRSSLNEMYAVLKELLGKDLTPV-YGPERAG 289
>gi|289549043|ref|YP_003474031.1| NAD-dependent epimerase/dehydratase [Thermocrinis albus DSM 14484]
gi|289182660|gb|ADC89904.1| NAD-dependent epimerase/dehydratase [Thermocrinis albus DSM 14484]
Length = 319
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 29/153 (18%)
Query: 31 SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-----NWASFRPQ 85
+GV++ L +SS G ++ A P H KY++E F ++ FRP
Sbjct: 109 TGVRRVLHMSSLGTHRDA------------PSMYHRT--KYMAEEFLKTLKLDFTIFRPS 154
Query: 86 YMIGSGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 144
++G + W RI + PV P+PG G VRD++ ++E+P +
Sbjct: 155 MILGPEQRLFSDMW---RITKYIPVVPLPGGGHYLFQPVDVRDVACAFVESLEDP-STFG 210
Query: 145 NIFNL-----VSDRAVTLDGMAKLCAQAAGLPV 172
+ L VS R + D M L + LPV
Sbjct: 211 KTYELCGPQRVSFRQLMKDTMELLGRKVVFLPV 243
>gi|39995734|ref|NP_951685.1| GDP-L-fucose synthase [Geobacter sulfurreducens PCA]
gi|409911179|ref|YP_006889644.1| GDP-L-fucose synthase [Geobacter sulfurreducens KN400]
gi|39982498|gb|AAR33958.1| GDP-L-fucose synthase [Geobacter sulfurreducens PCA]
gi|298504745|gb|ADI83468.1| GDP-L-fucose synthase [Geobacter sulfurreducens KN400]
Length = 314
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 93/250 (37%), Gaps = 46/250 (18%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPD 62
+N ++ V + +GV + LF+ S IY K A +P P E +
Sbjct: 83 DNLMIEANVIHSSYRTGVSKLLFLGSTCIYPKMASQPIREEYLLTGPLEPTNEAYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE-WFFDRIVRK---------RPVPI 112
AG Y + + + + P + G +N D E+ ++RK V +
Sbjct: 143 AGISLCRSYNRQYGTRFIAAMPTNLYGPNDNFDLEKSHVLPALIRKFHEAKIAGAPTVTV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G HV D++ + + E ++I N+ S +++ +A L G
Sbjct: 203 WGTGAPLREFIHVDDVADAALYLMRHHEG--NDIVNIGSGEEISIRDLALLVKIVVGFEG 260
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEY 227
E+V K G PR D+ LGWR L + ++E +E +
Sbjct: 261 ELVFDASKPDG----------------TPRKLSDVSRLHSLGWRHRIGLEDGVRETYEWF 304
Query: 228 VKIGRDKKAM 237
V G + M
Sbjct: 305 VGQGFPAETM 314
>gi|291279234|ref|YP_003496069.1| NAD-dependent epimerase/dehydratase [Deferribacter desulfuricans
SSM1]
gi|290753936|dbj|BAI80313.1| NAD-dependent epimerase/dehydratase [Deferribacter desulfuricans
SSM1]
Length = 323
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 28/239 (11%)
Query: 12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV----- 66
F TN+ L + + AK GV +F+ S++ +Y + P + V P + +
Sbjct: 100 FETNSTGTLN--LLELAKDYGVNKFVLASTSSLYAGQEMPFTEDKPVNTPISPYAASKKS 157
Query: 67 -QVEKYISENFS--NWASFRPQYMIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNI 122
+V Y F + + R + G D + F +I + P+ + G G Q +
Sbjct: 158 AEVTAYTYHYFYGIDVSVVRYFTVYGPAGRPDMSVFRFISQIYKDEPIIVYGDGSQSRDF 217
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
+V D++ A++ I NL ++ L M K + G +I++ D A
Sbjct: 218 TYVEDIADGTVKALKE---IGYEIINLGNNNPNKLIDMIKYVEELLGKKAKIINKDFHKA 274
Query: 183 GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEI 241
+ M +A+ AK++LGW DLK E V D K F+I
Sbjct: 275 DM----------MATWADITKAKELLGWEPKV----DLKTGLENTVNWFLDNKDFAFDI 319
>gi|83744470|gb|ABC42560.1| putative fucose synthase [Streptomyces hygroscopicus]
Length = 325
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 88/241 (36%), Gaps = 46/241 (19%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--------VKP 61
N+N R+Q + A ++GV + LF+ S+ IY +P E + G + +
Sbjct: 89 NDNLRIQTNLFAAAHAAGVDRLLFLGSSCIYPKHTPQPIPESALLTGALEETNDAYAIAK 148
Query: 62 DAGHVQVEKYISENFSNWASFRPQYMIGSGNN-KDCEEWFFDRIVRK---------RPVP 111
AG + V Y + W S P + G G+ ++R+ V
Sbjct: 149 IAGVIAVRSYRRQYGRRWISVMPTNVYGPGDTFHPTRSHVLPALIRRFHEAVRSGAEEVV 208
Query: 112 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
+ G+G HV DL++ T +++ + S N+ +T+ +A L A A G
Sbjct: 209 VWGTGTPRREFIHVDDLAAACTHLLDHYDDPSP--VNIGVGEDLTIADLATLVADAVGFT 266
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEE 226
I + G PR D+ GWR LPE ++
Sbjct: 267 GRITWDTSRPDG----------------TPRKLLDVSRLLATGWRPRIGLPEGVRATVRW 310
Query: 227 Y 227
Y
Sbjct: 311 Y 311
>gi|359414433|ref|ZP_09206898.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. DL-VIII]
gi|357173317|gb|EHJ01492.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. DL-VIII]
Length = 333
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 96/231 (41%), Gaps = 25/231 (10%)
Query: 11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHV 66
+F N ++ V D ++++ + +F+S+ +Y A E E + KP +
Sbjct: 111 MFGRNAKMEGEQWVLDSSENTHPCKVVFMSTCMVYDMAGEEGISESHLTKPVSPYGGSKI 170
Query: 67 QVEKYISENFSNW----ASFRPQYMIG----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQ 118
E + ++ + RP G +G F + + ++ + I G+G Q
Sbjct: 171 AAENMVLSYYNAYKLPTVVIRPFNTYGPFQKTGGEGGVVAIFINNSLDEKDINIYGTGEQ 230
Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
++ +V+D + + + N + + I N + R VT++ +A++ A + H
Sbjct: 231 TRDLLYVKDCARFVVESGYN-DKVNGEIVNAGTGRDVTINELAEIIADNRVKINHVKHIH 289
Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
P++ M + AK+++GW L E +KE EE+++
Sbjct: 290 PQS-----------EIMKLKCDYTKAKELIGWEPEYTLEEGIKET-EEWIR 328
>gi|254478570|ref|ZP_05091944.1| putative NAD-binding domain 4 protein [Carboxydibrachium pacificum
DSM 12653]
gi|214035499|gb|EEB76199.1| putative NAD-binding domain 4 protein [Carboxydibrachium pacificum
DSM 12653]
Length = 315
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 19/168 (11%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-VVKPDA------------ 63
N R + + ++A+ G+KQF+F SS+ +Y P E D V+KP +
Sbjct: 103 NVRGTQNLLEFARHRGIKQFVFASSSSVYGINHNVPWKEDDCVLKPISPYASTKVSGELL 162
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRI-VRKRPVPIPGSGMQFTNI 122
GHV Y + + R + G D F R+ + +P+PI G G +
Sbjct: 163 GHVYSHLY----GIRFIALRFFTVYGPRQRPDLAIHKFARLMLEGKPIPIYGDGSSRRDY 218
Query: 123 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL 170
++ D+ + A++ A + NL +++ V+L M + +A G+
Sbjct: 219 TYIDDIIEGVRRAMDY-TATLYEVINLGNNQIVSLLEMVRTLEEALGI 265
>gi|418244263|ref|ZP_12870686.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 14067]
gi|354511669|gb|EHE84575.1| UDP-glucose 4-epimerase [Corynebacterium glutamicum ATCC 14067]
Length = 329
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 39/222 (17%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
++N + D ++ GV +F S+A Y D P E +P + + I
Sbjct: 89 HDNVVTALTLLDAMRALGVHNLVFSSTAATYGEPDVVPITEDMPTQPTNAYGATKLSIDY 148
Query: 75 NFSNWA--------SFRPQYMIGS----GNNKDCEEWFFDRIVRKRPV------------ 110
+++A S R + G+ G N++ E +++
Sbjct: 149 AITSYAAAFGLAATSLRYFNVAGAYGNIGENREVETHLIPLVLQVATGHREKIFMFGDDW 208
Query: 111 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG- 169
P P G + H+ DL+ LA+E+ EA IFNL S ++ + ++C + G
Sbjct: 209 PTP-DGTAVRDYIHILDLAKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGH 267
Query: 170 -LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW 210
+P E+ P+ AG A A AK LGW
Sbjct: 268 PIPAEVA---PRRAGDPAT---------LIASSEKAKQELGW 297
>gi|435853998|ref|YP_007315317.1| nucleoside-diphosphate-sugar epimerase [Halobacteroides halobius
DSM 5150]
gi|433670409|gb|AGB41224.1| nucleoside-diphosphate-sugar epimerase [Halobacteroides halobius
DSM 5150]
Length = 304
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 27/219 (12%)
Query: 24 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS------ 77
+ ++A S + +F++ SSA +Y E + P + V K+ E++
Sbjct: 99 LLEYASSYDIVKFIYASSAAVYGRPQYLGINEEHPITP-ISYYGVAKHTPEHYIKIFNQL 157
Query: 78 ---NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
N+ R + G E F D+I+R+ I G G Q + +V+D++
Sbjct: 158 YELNYTILRYANVYGERQEAKGEGGVVAVFIDKILREDKPIIYGDGKQTRDFVYVKDVAR 217
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
A+E + + N+ D+ +++ + K+ Q + +E ++ + A
Sbjct: 218 ANLAALEKGDEET---INISCDQQTSINQLFKMIKQITNINLEPIY----------QAAR 264
Query: 191 PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
P H Y A+ +L W NL LKE Y K
Sbjct: 265 PGDIKHNYLLNNKAQRLLDWSPKYNLERGLKETLAYYQK 303
>gi|427382723|ref|ZP_18879443.1| hypothetical protein HMPREF9447_00476 [Bacteroides oleiciplenus YIT
12058]
gi|425729968|gb|EKU92819.1| hypothetical protein HMPREF9447_00476 [Bacteroides oleiciplenus YIT
12058]
Length = 322
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 32/221 (14%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-------WA 80
A+ +GVK+F++ +S+ Y + P VE + KP + + V KY++E +++
Sbjct: 109 ARDAGVKRFMYAASSSTYGDSKSLPKVEDVIGKPLSPYA-VTKYVNELYADVFSRTYGME 167
Query: 81 SFRPQYMIGSGNNKD-------CEEWFFDRIVRKRPVPIPGSG---MQFTNIAHVRDLSS 130
+ +Y G +D F +++ I G G FT I +V + +
Sbjct: 168 TIGLRYFNVFGRRQDPFGAYAAVIPLFVKKLMAHESPIINGDGEYSRDFTYIDNVIQM-N 226
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV-HYDPKAAGIDAKKA 189
ML + NP+A + ++N TL+ Q G E++ +DP A ++ +
Sbjct: 227 MLAMVTTNPDAVNQ-VYNTAYGERTTLN-------QLTGYLKELLSEFDPAIANVEIQHG 278
Query: 190 FPFRNM---HFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
P R H A A+ +LG+ N+ E LKE Y
Sbjct: 279 -PNRLGDIPHSLASIDKARTLLGYVPEYNMYEGLKEAVRWY 318
>gi|448305842|ref|ZP_21495770.1| nucleoside-diphosphate-sugar epimerase [Natronorubrum
sulfidifaciens JCM 14089]
gi|445587842|gb|ELY42092.1| nucleoside-diphosphate-sugar epimerase [Natronorubrum
sulfidifaciens JCM 14089]
Length = 324
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG 159
F +R+V I G G Q + ++ D + A +AA IFN+ + +T+
Sbjct: 192 FIERLVTGSEFTIYGDGTQTRSFCYIDDGIDAIERA-GFADAARDEIFNVGTQDEITITE 250
Query: 160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED 219
+A G E+ H + K + P + A+D+LG+ TT+L
Sbjct: 251 LASALFDVTGRRPEVTHIESKELSGSPDRRQP--------DLSKARDLLGYEPTTSLETG 302
Query: 220 LKERFEEYVK 229
L+ FE Y +
Sbjct: 303 LRRTFEYYYR 312
>gi|119961604|ref|YP_949736.1| NAD dependent epimerase/dehydratase family protein [Arthrobacter
aurescens TC1]
gi|119948463|gb|ABM07374.1| putative NAD dependent epimerase/dehydratase family protein
[Arthrobacter aurescens TC1]
Length = 324
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 81 SFRPQYMIGSG-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
S P +++G G N D W I +P+ +PGSG + + H D++
Sbjct: 155 SIHPGHIVGPGWLPIGPLGNLDPGVWH--TIASGQPLQVPGSGTELMHHVHADDVAQAFE 212
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 165
A+ + +AA+ FN+V+ A+T+ G + +
Sbjct: 213 KAILHRDAAAGEDFNIVAPTALTVRGYVSIAS 244
>gi|406996190|gb|EKE14639.1| NAD-dependent epimerase/dehydratase [uncultured bacterium]
Length = 119
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 107 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD--RAVTLDGMAKLC 164
K+ + I G G Q ++ +V DL LA+ N + A + FN+ + +L + +
Sbjct: 3 KKSLTIYGDGYQIRDLLYVGDLIDAYELAINNIKKARGHAFNIGGGIKNSYSLLQVINIL 62
Query: 165 AQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
G P++I ++D + G D K +F ++ ILGW+ TN + +K
Sbjct: 63 KDNFGYPIKI-NFDKERLG-DQK--------YFVSKNEKINKILGWKPKTNFVDGIKN 110
>gi|86740009|ref|YP_480409.1| methyltransferase FkbM [Frankia sp. CcI3]
gi|86566871|gb|ABD10680.1| Methyltransferase FkbM [Frankia sp. CcI3]
Length = 619
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 13/134 (9%)
Query: 37 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 96
+F+S+ GI+ D P V E I+ + +W RP + G ++++
Sbjct: 97 VFLSTTGIFTTLDPPSKRI---------RVAAEGTIAASGLDWTIIRPTMIYGGPDDRNM 147
Query: 97 EEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 155
++R+ PV P+PG G HV DL+ + L AA +++ A+
Sbjct: 148 ARLLA--LLRRVPVLPVPGGGHHLQQPVHVEDLARTV-LRATTTAAAIGRAYDVAGPEAL 204
Query: 156 TLDGMAKLCAQAAG 169
T + A G
Sbjct: 205 TFRQVVITAGAAVG 218
>gi|440798247|gb|ELR19315.1| NAD dependent epimerase/dehydratase superfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 376
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 12/166 (7%)
Query: 1 MEFNYAKFKALFRTN--NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV 58
M+F AL++TN L AD + G F++ISS ++PP E
Sbjct: 84 MDFYPQDVAALYQTNVEGTRNLLSAFADARRGRG-GTFIYISSTETLGGVEKPPGDEQTE 142
Query: 59 VKP--DAGHVQVE-----KYISENFS-NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV 110
++P + G +VE + +SE + RP ++G G+ E + I
Sbjct: 143 LRPVYEYGRSKVEAEKVVREVSERLGVDHIILRPTGVLGPGDFFTIYE-LMEMINSGLLC 201
Query: 111 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 156
IPGSG HV D+ + A+E E + F L D +T
Sbjct: 202 FIPGSGQAQLMYTHVDDVVQGIVKAIERREVCRDDTFILCPDEGLT 247
>gi|403529234|ref|YP_006664121.1| NAD dependent epimerase/dehydratase family protein [Arthrobacter
sp. Rue61a]
gi|403231661|gb|AFR31083.1| putative NAD dependent epimerase/dehydratase family protein
[Arthrobacter sp. Rue61a]
Length = 330
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 81 SFRPQYMIGSG-------NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
S P +++G G N D W I +P+ +PGSG + + H D++
Sbjct: 161 SIHPGHIVGPGWLPIGPLGNLDPGVWH--TIASGQPLQVPGSGTELMHHVHADDVAQAFE 218
Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 165
A+ + +AA+ FN+V+ A+T+ G + +
Sbjct: 219 KAILHRDAAAGEDFNIVAPTALTVRGYVSIAS 250
>gi|312794573|ref|YP_004027496.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181713|gb|ADQ41883.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 310
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 36/238 (15%)
Query: 16 NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPD-------- 62
N ++ V + GVK+ LF+ S+ IY +P E + G + + +
Sbjct: 83 QNLMIESNVIHASYKYGVKKLLFLGSSCIYPRECPQPIKEEYLLSGYLEQTNEAYAIAKI 142
Query: 63 AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE----------EWFFDRIVRKRPVPI 112
AG + Y + +N+ S P + G +N D E ++ +++ K V +
Sbjct: 143 AGLKLCQYYKKQYGANFISCMPTNLYGPYDNFDLETSHVIPALVRKFHEAKVLNKPEVEV 202
Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
G+G +V DL+ + + N+ S V+++ +A + + G
Sbjct: 203 WGTGKVLREFLYVDDLADACVFLMNYYDG--DMWINVGSGEEVSIEELANIIKEVTGYEG 260
Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
+IV ++PK +K + LGW TNL E L+ ++ Y+K+
Sbjct: 261 KIV-FNPKMPDGTPRKLLDCSRL----------KELGWLPKTNLREGLRMTYDWYLKM 307
>gi|226183929|dbj|BAH32033.1| GDP-L-fucose synthase [Rhodococcus erythropolis PR4]
Length = 322
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 91/236 (38%), Gaps = 36/236 (15%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKP 61
+ N R+Q V D A + GV++ LF+ S+ IY K A +P P + +
Sbjct: 91 SENLRIQVNVLDAALAHGVERLLFLGSSCIYPKLAPQPIKEEYLLTGHLEPTNDAYAIAK 150
Query: 62 DAGHVQVEKYISENFSNWASFRPQYMIGSGNN-KDCEEWFFDRIVRK------RPVPIP- 113
AG + V+ ++ +W S P + G G+N +VR+ VP+
Sbjct: 151 IAGILHVQAARRQHGRSWISAMPTNLYGPGDNFSPRGSHVLPALVRRYDEAQSSAVPLVV 210
Query: 114 --GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
GSG HV DL+S ++N + AS N+ + T+ +A + A G
Sbjct: 211 NWGSGNPRREFLHVDDLASACLHLLDNYDGASH--VNVGTGEDHTIREIASMVADEVGYT 268
Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
E K G K ++ E LGWR T L E + Y
Sbjct: 269 GETRWDTSKPDGTMQK----LLDVSMIRE-------LGWRPTIGLREGIASTVSWY 313
>gi|399006298|ref|ZP_10708825.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM17]
gi|398122464|gb|EJM12056.1| nucleoside-diphosphate-sugar epimerase [Pseudomonas sp. GM17]
Length = 309
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 15 NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
+NF V + + +GVK+ LF SSA +Y E ++ D K +K SE
Sbjct: 95 QSNFIGTLNVCEAMRQAGVKRVLFASSAAVYGNNGEGESIDEDTPKAPLTPYASDKLASE 154
Query: 75 NFSNW---------ASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT 120
+ ++ A FR + G S F +R + P+ + G G Q
Sbjct: 155 YYFDFYRRQHGLEPAIFRFFNIFGPRQDPSSPYSGVISIFCERAQKGLPITVFGDGEQTR 214
Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVHYDP 179
+ +V DL +L ++E P+ + N+ ++A TL + ++ + G LP + Y P
Sbjct: 215 DFMYVEDLVDVLVQSLETPQLEVGAV-NVGLNQATTLKQLLEVLGEVVGQLPP--ISYGP 271
Query: 180 KAAG 183
+G
Sbjct: 272 ARSG 275
>gi|156152091|gb|ABU54327.1| putative epimerase/dehydratase [Desulfotignum phosphitoxidans DSM
13687]
Length = 322
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 105 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC 164
++ P+P+ G G Q ++ H+ D+ L LA +AA + + ++T++ +A++
Sbjct: 201 LKNEPIPVFGDGEQSSDWVHIDDIVEALVLA--PCDAAVGQVMDFGVGESITINKIAQIV 258
Query: 165 AQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF 224
+ +I H P G +AK +H A+ AK+ LGW +L E LK
Sbjct: 259 IEMTKSKSKIEHL-PMRTG-EAK-------VHTKADNAPAKEYLGWEPKIDLREGLKRTI 309
Query: 225 EEYVK 229
+ K
Sbjct: 310 PYFAK 314
>gi|148652045|ref|YP_001279138.1| NAD-dependent epimerase/dehydratase [Psychrobacter sp. PRwf-1]
gi|148571129|gb|ABQ93188.1| NAD-dependent epimerase/dehydratase [Psychrobacter sp. PRwf-1]
Length = 506
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 24 VADWAKSSGVKQFLFISSA---GIYKPADEP--PHVEGDVVKPDA-----GHVQVEKYIS 73
+A A +GVK+F+F+SS G Y ++P P V P + ++K
Sbjct: 97 LAQQAVEAGVKRFIFLSSIKVNGEYSLPNQPFTPEVTQSPTDPYGLSKYEAEIGLQKIAD 156
Query: 74 ENFSNWASFRPQYMIGS---GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
+ ++ RP + G+ GN + +W + I P+P+ G ++ V +L+
Sbjct: 157 NSNMDYVIVRPTLVYGNKVKGNFRSLIKWTYKGI----PLPLAGIKNNLRSLVSVENLTD 212
Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
+ +++NP A +++F LVSD L A L A GL V+
Sbjct: 213 FIISSIDNPN-AKNDVF-LVSD-GTDLSTAALLNNIAIGLGVK 252
>gi|293603638|ref|ZP_06686059.1| NAD-dependent epimerase/dehydratase [Achromobacter piechaudii ATCC
43553]
gi|292818074|gb|EFF77134.1| NAD-dependent epimerase/dehydratase [Achromobacter piechaudii ATCC
43553]
Length = 306
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----KPDAGHVQVEKYI 72
+ L + +A + GV++ L IS+ G AD +GD + K D ++
Sbjct: 92 HVHLPQRIARACQRHGVRRLLHISALG----ADS----QGDSMYQRSKGDGEAAIKAEFP 143
Query: 73 SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSM 131
S+N S W FRP + G +N F + R PV P+ G+ + + +V D+ +
Sbjct: 144 SDNDSGWTIFRPSVIFGPDDNF---TNMFASLARWLPVLPLAGAHARMQPV-YVGDVVAA 199
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP 191
+ A+ + + L + TL +A+LCA +G P +V P G+ +A
Sbjct: 200 MATALADNHTCGKT-YELGGPQVYTLGEIARLCAAWSGHPRPVV---PVPMGVGRIQARL 255
Query: 192 FRNMHFYAEPRAAKDIL 208
F M EP ++D L
Sbjct: 256 FECM--PGEPLMSRDNL 270
>gi|448733375|ref|ZP_21715620.1| NAD-dependent epimerase/dehydratase [Halococcus salifodinae DSM
8989]
gi|445803109|gb|EMA53409.1| NAD-dependent epimerase/dehydratase [Halococcus salifodinae DSM
8989]
Length = 366
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 56/138 (40%), Gaps = 10/138 (7%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVE----GDVVKPDAGHVQVEKYISENFSNWAS-- 81
AK GV + +++SS +Y D P E V ++ EK I E+F
Sbjct: 113 AKEEGVDRVVYVSSTAVYGTHDSHPITEESPLDGVGAYGEAKIEAEK-ICEDFRRMGMCV 171
Query: 82 --FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
RP+ IG + FD I VP+ G G + HV DL + +
Sbjct: 172 PILRPKTFIGP-QRLGVFQVLFDWIESGANVPMVGWGNNKYQLMHVYDLVRAMEFMIAKD 230
Query: 140 EAASSNIFNLVSDRAVTL 157
EA + +FN+ +D T+
Sbjct: 231 EADVNTVFNVGADEFGTM 248
>gi|448340105|ref|ZP_21529087.1| NAD-dependent epimerase/dehydratase [Natrinema gari JCM 14663]
gi|445631160|gb|ELY84400.1| NAD-dependent epimerase/dehydratase [Natrinema gari JCM 14663]
Length = 311
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 25/169 (14%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDV---VKPDAGHVQVEKYISENFSNWAS--- 81
A+ +G + ++ S++ IY EP DV +A + E+Y +E ++N +
Sbjct: 100 ARKAGCETVVYASTSSIYGSRTEPSPESMDVEVHTAYEASKLARERY-AEYYANHHAMNV 158
Query: 82 ----FRPQYMIGSGNNKDCEEW------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM 131
F Y GN E+ F D I P + G G Q + HVRD++
Sbjct: 159 AGLRFFSVYQGFGGNEAHKGEYANTIAQFADAIATGEPPELFGDGTQTRDFTHVRDVARA 218
Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
LA ++ + +FN+ ++ A + + M + A G V DPK
Sbjct: 219 CELAADHE---LTGVFNVGTEEAYSFNEMVAMINDALGTDV-----DPK 259
>gi|399911429|ref|ZP_10779743.1| GDP-L-fucose synthase [Halomonas sp. KM-1]
Length = 336
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 95/243 (39%), Gaps = 41/243 (16%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEP------------PHVEGDVVKPDA 63
N ++ V + A ++G+ + LF+ S+ IY + A++P P E + A
Sbjct: 86 NLMIEANVINAAYNAGIDRLLFLGSSCIYPRMAEQPMREEVLLNGPLEPTNEAYAIAKIA 145
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR----------PVPIP 113
G E Y + ++ S P + G G+N E+ + +R V +
Sbjct: 146 GIKLCESYQRQYGCDFRSVMPTNLYGPGDNFHHEDSHVIPGLLRRFHEAQQLGASTVTVW 205
Query: 114 GSGMQFTNIAHVRDL--SSMLTLAVENPEAASSNI-----FNLVSDRAVTLDGMAKLCAQ 166
GSG HV DL +S+ + ++ A+ N+ + R ++ +A+L AQ
Sbjct: 206 GSGTPRREFLHVDDLAIASVHVMNLQRERYATQTTPRRSHLNVGTGRDCSIRELAELIAQ 265
Query: 167 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE 226
G E+ H+D +K + LGW+ +L E L + +
Sbjct: 266 ITGFAGEM-HFDASKPDGTPRKMLDVSRLQ----------ALGWQPRISLSEGLHDTYRW 314
Query: 227 YVK 229
Y+
Sbjct: 315 YLS 317
>gi|312197536|ref|YP_004017597.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c]
gi|311228872|gb|ADP81727.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c]
Length = 342
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML--TLAVENPE 140
RP ++G G N W+ R+ R V PG T VRDL++ L T A
Sbjct: 155 RPGLILGPGENIGRLPWWLHRVARGGRVLAPGPADLETRFIDVRDLAAWLLDTAAAGVAG 214
Query: 141 AASSNIFNLVSDRA-VTLDGMAKLCAQAAGLPVEIVHYDPK---AAGIDAKKAFPF 192
A + +++V VT+ G+ C G E+V DP+ AAG+ P
Sbjct: 215 AGAGGAYDVVCPPGHVTMAGLLAACLSVTGSEAELVWSDPEPILAAGVRPWTGLPM 270
>gi|312621472|ref|YP_004023085.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312201939|gb|ADQ45266.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 309
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 90/241 (37%), Gaps = 46/241 (19%)
Query: 17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADE--------PPHVEGDVVKPDA 63
N ++ V A GVK+ LF+ S+ IY +P E P E V A
Sbjct: 84 NLMIECNVIHSAYKYGVKKLLFLGSSCIYPRECPQPMKEEYLLSGYLEPTNEAYAVAKIA 143
Query: 64 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE---------EWFFDRIVRKRP-VPIP 113
G + Y + +N+ S P + G +N D F + + +P V +
Sbjct: 144 GLKLCQYYKRQYGANFISCMPTNLYGPNDNFDLHTSHVIPALIRKFHEAKINNKPYVEVW 203
Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
G+G HV DL+ ++N + N+ S V++ +A + + AG E
Sbjct: 204 GTGKSLREFLHVDDLADACLFLMKNYD--DEIWINVGSGEEVSIAELANMIKEIAGYKGE 261
Query: 174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPEDLKERFEEYV 228
I+ ++P PR DI LGW +L + L +E YV
Sbjct: 262 IL-FNPDMPD---------------GTPRKLLDISRLKSLGWERKISLYDGLMSTYEWYV 305
Query: 229 K 229
+
Sbjct: 306 E 306
>gi|399925600|ref|ZP_10782958.1| UDP-glucose 4-epimerase [Myroides injenensis M09-0166]
Length = 322
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 38/226 (16%)
Query: 28 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 87
++ GVK+F++ +S+ Y ++ P +E + KP + + V KY++E +++ F Y
Sbjct: 108 SRDEGVKRFVYAASSSTYGDSEILPKIEDIIGKPLSPYA-VTKYVNELYAD--VFSKTYG 164
Query: 88 IGS---------GNNKD-------CEEWFFDRIVRKRPVPIPGSG---MQFTNIAHVRDL 128
I + G +D F ++++ I G+G FT I +V +
Sbjct: 165 IQTIGLRYFNVFGRRQDPNGAYAAVIPLFVKQLMKHESPVINGTGDYSRDFTYIDNVIQM 224
Query: 129 S--SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA 186
+ +MLT EN EA ++ V DR TL+ + + ++ + YD + A ++
Sbjct: 225 NERAMLT---ENLEAVNTVYNTAVGDRT-TLNQLVRYLKES------LSAYDAEIAHVEV 274
Query: 187 KKAFPFRNM---HFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
K P R H A A+ +LG+ T + E LKE + Y K
Sbjct: 275 KHG-PNRVGDIPHSLASVDKARKLLGYEPTHTIGEGLKEAVKWYWK 319
>gi|320101642|ref|YP_004177233.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
gi|319748924|gb|ADV60684.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
Length = 343
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 109 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 163
P+ I G G Q + H DL+ + LAVE+P A + + FNL +DR+ T+ +A+L
Sbjct: 224 PLRILGDGHQVRHYTHGSDLARGIVLAVESPAALNED-FNLSTDRSTTVLELAQL 277
>gi|291436219|ref|ZP_06575609.1| UDP-glucose 4-epimerase [Streptomyces ghanaensis ATCC 14672]
gi|291339114|gb|EFE66070.1| UDP-glucose 4-epimerase [Streptomyces ghanaensis ATCC 14672]
Length = 325
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 19/134 (14%)
Query: 98 EWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDL--SSMLTLAVENPEAASSNIFNLVS 151
+ F R++R PV I G G Q + HV D+ + MLT +V + +A + N+ +
Sbjct: 179 DMFISRLIRATLRGEPVEIYGDGTQLRDFTHVSDVVRALMLTASVRDRGSA---VLNIGT 235
Query: 152 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 211
AV+++ + + A+ GL + + + + A+ R A+ +LG+
Sbjct: 236 GSAVSVNEVVSMTAELTGLRPCTAYGSARIGDVRSTT----------ADVRQAQSVLGFT 285
Query: 212 STTNLPEDLKERFE 225
+ T L E L + E
Sbjct: 286 ARTGLREGLATQIE 299
>gi|116247586|gb|ABJ90156.1| MoeE5 [Streptomyces ghanaensis ATCC 14672]
Length = 340
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 19/134 (14%)
Query: 98 EWFFDRIVRK----RPVPIPGSGMQFTNIAHVRDL--SSMLTLAVENPEAASSNIFNLVS 151
+ F R++R PV I G G Q + HV D+ + MLT +V + +A + N+ +
Sbjct: 194 DMFISRLIRATLRGEPVEIYGDGTQLRDFTHVSDVVRALMLTASVRDRGSA---VLNIGT 250
Query: 152 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR 211
AV+++ + + A+ GL + + + + A+ R A+ +LG+
Sbjct: 251 GSAVSVNEVVSMTAELTGLRPCTAYGSARIGDVRSTT----------ADVRQAQSVLGFT 300
Query: 212 STTNLPEDLKERFE 225
+ T L E L + E
Sbjct: 301 ARTGLREGLATQIE 314
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,194,481,447
Number of Sequences: 23463169
Number of extensions: 179480146
Number of successful extensions: 410733
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 287
Number of HSP's successfully gapped in prelim test: 1706
Number of HSP's that attempted gapping in prelim test: 408927
Number of HSP's gapped (non-prelim): 2052
length of query: 255
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 116
effective length of database: 9,097,814,876
effective search space: 1055346525616
effective search space used: 1055346525616
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)