BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025272
(255 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1
PE=2 SV=1
Length = 410
Score = 194 bits (493), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 140/214 (65%), Gaps = 18/214 (8%)
Query: 52 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLY 111
S+++ ++HGNVYP G++ +TM IG PA+ YFLD+DTGS LTWLQCDAPC C PH LY
Sbjct: 22 SAVVLELHGNVYPIGHFFITMNIGDPAKSYFLDIDTGSTLTWLQCDAPCTNCNIVPHVLY 81
Query: 112 RPS-NDLVPCEDPICASLHAP--GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYT 168
+P+ LV C D +C L+ C QCDY ++Y D SS+GVLV D F+ + +
Sbjct: 82 KPTPKKLVTCADSLCTDLYTDLGKPKRCGSQKQCDYVIQYVD-SSSMGVLVIDRFSLSAS 140
Query: 169 NGQRLNP-RLALGCGYNQ------VPGASYHPLDGILGLGKGKSSIVSQLHSQKLI-RNV 220
NG NP +A GCGY+Q VP P+D ILGL +GK +++SQL SQ +I ++V
Sbjct: 141 NGT--NPTTIAFGCGYDQGKKNRNVP----IPVDSILGLSRGKVTLLSQLKSQGVITKHV 194
Query: 221 VGHCLSGGGGGFLFFGDDLYDSSRVVWTSMSSDY 254
+GHC+S GGGFLFFGD +S V WT M+ ++
Sbjct: 195 LGHCISSKGGGFLFFGDAQVPTSGVTWTPMNREH 228
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2
SV=2
Length = 410
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 143/212 (67%), Gaps = 14/212 (6%)
Query: 52 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLY 111
S+++ ++HGNVYP G++ VTM IG PA+PYFLD+DTGS LTWLQCD PC+ C + PH LY
Sbjct: 22 SAVVLELHGNVYPIGHFFVTMNIGDPAKPYFLDIDTGSTLTWLQCDYPCINCNKVPHGLY 81
Query: 112 RPS-NDLVPCEDPICASLHAPGHH--NCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYT 168
+P V C + CA L+A C QC Y ++Y GGSS+GVL+ D+F+ +
Sbjct: 82 KPELKYAVKCTEQRCADLYADLRKPMKCGPKNQCHYGIQYV-GGSSIGVLIVDSFSLPAS 140
Query: 169 NGQRLNPR-LALGCGYNQVPGASYH----PLDGILGLGKGKSSIVSQLHSQKLI-RNVVG 222
NG NP +A GCGYNQ G + H P++GILGLG+GK +++SQL SQ +I ++V+G
Sbjct: 141 NGT--NPTSIAFGCGYNQ--GKNNHNVPTPVNGILGLGRGKVTLLSQLKSQGVITKHVLG 196
Query: 223 HCLSGGGGGFLFFGDDLYDSSRVVWTSMSSDY 254
HC+S G GFLFFGD +S V W+ M+ ++
Sbjct: 197 HCISSKGKGFLFFGDAKVPTSGVTWSPMNREH 228
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana
GN=At1g65240 PE=1 SV=2
Length = 475
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 62 VYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPS------- 114
V G Y + +G P + Y + +DTGSD+ W+ C PC +C + +R S
Sbjct: 68 VDSVGLYFTKIKLGSPPKEYHVQVDTGSDILWINC-KPCPKCPTKTNLNFRLSLFDMNAS 126
Query: 115 --NDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQR 172
+ V C+D C+ + +C+ C Y + YAD +S G ++D G
Sbjct: 127 STSKKVGCDDDFCSFISQS--DSCQPALGCSYHIVYADESTSDGKFIRDMLTLEQVTGDL 184
Query: 173 ----LNPRLALGCGYNQVP--GASYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVGHCLS 226
L + GCG +Q G +DG++G G+ +S++SQL + + V HCL
Sbjct: 185 KTGPLGQEVVFGCGSDQSGQLGNGDSAVDGVMGFGQSNTSVLSQLAATGDAKRVFSHCLD 244
Query: 227 GGGGGFLFFGDDLYDSSRVVWTSM 250
GG + F + DS +V T M
Sbjct: 245 NVKGGGI-FAVGVVDSPKVKTTPM 267
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1
PE=1 SV=1
Length = 437
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 58 VHGNVYP-TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRP--- 113
V +VY G Y + + IG PA+P+ +DTGSDL W QC PC +C P++ P
Sbjct: 84 VETSVYAGDGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQ-PCTQCFNQSTPIFNPQGS 142
Query: 114 -SNDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQR 172
S +PC +C +L +P N C Y Y DG + G + + F G
Sbjct: 143 SSFSTLPCSSQLCQALSSPTCSN----NFCQYTYGYGDGSETQGSMGTETLTF----GSV 194
Query: 173 LNPRLALGCGYNQVPGASYHPLDGILGLGKGKSSIVSQLHSQKL 216
P + GCG N G G++G+G+G S+ SQL K
Sbjct: 195 SIPNITFGCGENN-QGFGQGNGAGLVGMGRGPLSLPSQLDVTKF 237
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2
PE=1 SV=1
Length = 438
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 24/155 (15%)
Query: 66 GYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSN----DLVPCE 121
G Y + + IG P + +DTGSDL W QC+ PC +C P P++ P + +PCE
Sbjct: 94 GEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCE-PCTQCFSQPTPIFNPQDSSSFSTLPCE 152
Query: 122 DPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGC 181
C L + +N E C Y Y DG ++ G + + F F ++ P +A GC
Sbjct: 153 SQYCQDLPSETCNNNE----CQYTYGYGDGSTTQGYMATETFTFETSS----VPNIAFGC 204
Query: 182 -----GYNQVPGASYHPLDGILGLGKGKSSIVSQL 211
G+ Q GA G++G+G G S+ SQL
Sbjct: 205 GEDNQGFGQGNGA------GLIGMGWGPLSLPSQL 233
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana
GN=At5g10080 PE=1 SV=1
Length = 528
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 74 IGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLY-----RPSNDLVPCEDP----- 123
IG P+ + + LDTGS+L W+ C+ CV+C Y + N+ P
Sbjct: 106 IGTPSVSFLVALDTGSNLLWIPCN--CVQCAPLTSTYYSSLATKDLNEYNPSSSSTSKVF 163
Query: 124 ICASLHAPGHHNCEDPA-QCDYELEYADGG-SSLGVLVKDAFAFNYTNGQRL-------N 174
+C+ +CE P QC Y + Y G SS G+LV+D Y RL
Sbjct: 164 LCSHKLCDSASDCESPKEQCPYTVNYLSGNTSSSGLLVEDILHLTYNTNNRLMNGSSSVK 223
Query: 175 PRLALGCGYNQ----VPGASYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSGGGG 230
R+ +GCG Q + G + DG++GLG + S+ S L L+RN C
Sbjct: 224 ARVVIGCGKKQSGDYLDGVA---PDGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDS 280
Query: 231 GFLFFGD 237
G ++FGD
Sbjct: 281 GRIYFGD 287
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana
GN=ASPG1 PE=1 SV=1
Length = 500
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 58 VHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSN-- 115
V G +G Y + +G PA+ +L LDTGSD+ W+QC+ PC C + P++ P++
Sbjct: 152 VSGASQGSGEYFSRIGVGTPAKEMYLVLDTGSDVNWIQCE-PCADCYQQSDPVFNPTSSS 210
Query: 116 --DLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRL 173
+ C P C+ L + +C Y++ Y DG ++G L D F N ++
Sbjct: 211 TYKSLTCSAPQCSLLETSACRS----NKCLYQVSYGDGSFTVGELATDTVTFG--NSGKI 264
Query: 174 NPRLALGCGYNQ 185
N +ALGCG++
Sbjct: 265 N-NVALGCGHDN 275
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana
GN=ASPG2 PE=2 SV=1
Length = 470
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 58 VHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSND- 116
V G +G Y V + +G P R ++ +D+GSD+ W+QC PC C + P++ P+
Sbjct: 121 VSGMDQGSGEYFVRIGVGSPPRDQYMVIDSGSDMVWVQCQ-PCKLCYKQSDPVFDPAKSG 179
Query: 117 ---LVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRL 173
V C +C + G H+ C YE+ Y DG + G L + F T +
Sbjct: 180 SYTGVSCGSSVCDRIENSGCHS----GGCRYEVMYGDGSYTKGTLALETLTFAKT----V 231
Query: 174 NPRLALGCGYNQ 185
+A+GCG+
Sbjct: 232 VRNVAMGCGHRN 243
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana
GN=At2g35615 PE=3 SV=1
Length = 447
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 66 GYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLV----PCE 121
G + +++ IG P F DTGSDLTW+QC PC +C + P++ PC+
Sbjct: 83 GEFFMSITIGTPPIKVFAIADTGSDLTWVQC-KPCQQCYKENGPIFDKKKSSTYKSEPCD 141
Query: 122 DPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLN-PRLALG 180
C +L + E C Y Y D S G + + + + +G ++ P G
Sbjct: 142 SRNCQALSSTERGCDESNNICKYRYSYGDQSFSKGDVATETVSIDSASGSPVSFPGTVFG 201
Query: 181 CGYNQ 185
CGYN
Sbjct: 202 CGYNN 206
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1
Length = 437
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 7/126 (5%)
Query: 65 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDL----VPC 120
+G Y + + IG P P DTGSDL W QC APC C PL+ P V C
Sbjct: 87 SGEYLMNVSIGTPPFPIMAIADTGSDLLWTQC-APCDDCYTQVDPLFDPKTSSTYKDVSC 145
Query: 121 EDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPR-LAL 179
C +L + D C Y L Y D + G + D ++ + + + + +
Sbjct: 146 SSSQCTALENQASCSTNDNT-CSYSLSYGDNSYTKGNIAVDTLTLGSSDTRPMQLKNIII 204
Query: 180 GCGYNQ 185
GCG+N
Sbjct: 205 GCGHNN 210
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1
Length = 453
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 75/172 (43%), Gaps = 23/172 (13%)
Query: 77 PARPYFLDLDTGSDLTWLQCD-APCVRCVEAPHPLYRPSNDLVPCEDPICAS----LHAP 131
P + + +DTGS+L+WL+C+ + V P S +PC P C + P
Sbjct: 82 PPQNISMVIDTGSELSWLRCNRSSNPNPVNNFDPTRSSSYSPIPCSSPTCRTRTRDFLIP 141
Query: 132 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAF-NYTNGQRLNPRLALGCGYNQVPGAS 190
+C+ C L YAD SS G L + F F N TN + L GC V G+
Sbjct: 142 A--SCDSDKLCHATLSYADASSSEGNLAAEIFHFGNSTN----DSNLIFGC-MGSVSGSD 194
Query: 191 YH---PLDGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSGGGG--GFLFFGD 237
G+LG+ +G S +SQ+ K +C+SG GFL GD
Sbjct: 195 PEEDTKTTGLLGMNRGSLSFISQMGFPKF-----SYCISGTDDFPGFLLLGD 241
>sp|P29197|CH60A_ARATH Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60
PE=1 SV=2
Length = 577
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 5 MFPFGSTLPSEAFVRLPDRSFHFQPVPGRLSWSRNYAAKGIKFICACSSLLFQ 57
M+ F S L S+A + + + + V R+SWSRNYAAK IKF +L+ +
Sbjct: 1 MYRFASNLASKARI-----AQNARQVSSRMSWSRNYAAKEIKFGVEARALMLK 48
>sp|P29185|CH61_MAIZE Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2
Length = 577
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 5 MFPFGSTLPSEAFVRLPDRSFHFQPVPGRLSWSRNYAAKGIKFICACSSLLFQ 57
M+ ++L S+A R S + V RL+WSRNYAAK IKF +L+ +
Sbjct: 1 MYRAAASLASKA--RQAGNSLATRQVGSRLAWSRNYAAKDIKFGVEARALMLR 51
>sp|P43232|CARP5_RHINI Rhizopuspepsin-5 OS=Rhizopus niveus PE=3 SV=2
Length = 392
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 64/176 (36%), Gaps = 40/176 (22%)
Query: 60 GNVYPTGYYNVTMYIGQ-----PARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPS 114
G V T YYN Y GQ P LD DTGS W + C C + Y P+
Sbjct: 72 GRVPVTDYYNDIEYFGQVKVGTPGVTLKLDFDTGSSDLWF-ASSLCTNCGYS-QTKYNPN 129
Query: 115 NDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLN 174
+D + + Y DG S+ G+L D QR
Sbjct: 130 QSRTYAKDGRA------------------WSISYGDGSSASGILGTDTVVLGGLTIQRQT 171
Query: 175 PRLALGCGYNQVPGASYH--PLDGILGLG-------KGKSSIVSQLHSQKLIRNVV 221
LA + +S+ P DG+LGLG +G + V L SQ LI N V
Sbjct: 172 IELA------RREASSFQNGPSDGLLGLGFNSITTVRGVKTPVDNLISQGLISNPV 221
>sp|Q43298|CH62_MAIZE Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2
SV=1
Length = 576
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 5 MFPFGSTLPSEAFVRLPDRSFHFQPVPGRLSWSRNYAAKGIKFICACSSLLFQ 57
M+ ++L S+A R S + V RL+WSRNYAAK IKF +L+ +
Sbjct: 1 MYRAAASLASKA--RQAGSSSAARQVGSRLAWSRNYAAKDIKFGVEARALMLR 51
>sp|P06026|CARP_RHICH Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2
Length = 393
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 63/170 (37%), Gaps = 36/170 (21%)
Query: 60 GNVYPTGYYNVTMY-----IGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPS 114
G V T Y N Y IG P + + LD DTGS W+ C C + Y P
Sbjct: 72 GTVPMTDYGNDVEYYGQVTIGTPGKKFNLDFDTGSSDLWI-ASTLCTNC-GSRQTKYDPK 129
Query: 115 NDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLN 174
++ A G + + Y DG S+ G+L KD N G L
Sbjct: 130 Q---------SSTYQADGRT---------WSISYGDGSSASGILAKD----NVNLGGLLI 167
Query: 175 PRLALGCGYNQVPGASYHPLDGILGLG-------KGKSSIVSQLHSQKLI 217
+ + + P DG+LGLG +G + + L SQ LI
Sbjct: 168 KGQTIELAKREAASFANGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLI 217
>sp|P10602|CARP1_RHINI Rhizopuspepsin-1 OS=Rhizopus niveus GN=RNAP PE=1 SV=1
Length = 389
Score = 38.5 bits (88), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 64/176 (36%), Gaps = 36/176 (20%)
Query: 54 LLFQVHGNVYPTGYYNVTMY-----IGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPH 108
+ + G+V Y N Y +G P LD DTGS W C C + H
Sbjct: 63 ITTEASGSVPMVDYENDVEYYGEVTVGTPGIKLKLDFDTGSSDMWF-ASTLCSSCSNS-H 120
Query: 109 PLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYT 168
Y DP +S +A + + Y DG S+ G+L D N
Sbjct: 121 TKY----------DPKKSSTYAADGRT--------WSISYGDGSSASGILATD----NVN 158
Query: 169 NGQRLNPRLALGCGYNQVPGASYHPLDGILGLG-------KGKSSIVSQLHSQKLI 217
G L + + + + +DG+LGLG +G + V L SQ LI
Sbjct: 159 LGGLLIKKQTIELAKRESSAFATDVIDGLLGLGFNTITTVRGVKTPVDNLISQGLI 214
>sp|P69477|NEP2_NEPDI Aspartic proteinase nepenthesin-2 (Fragments) OS=Nepenthes
distillatoria PE=1 SV=1
Length = 178
Score = 38.1 bits (87), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 20/95 (21%)
Query: 90 DLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYA 149
DL W QC+ PC +C + +PCE C L + C+ C Y Y
Sbjct: 20 DLIWTQCE-PCTQCFSQDSSSFS----TLPCESQYCQDLPS---ETCD----CQYTYGYG 67
Query: 150 DGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYN 184
DG S+ G + + +G + P +A GCG N
Sbjct: 68 DGSSTQGYMAXE-------DGSSV-PNIAFGCGDN 94
>sp|Q05046|CH62_CUCMA Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2
PE=1 SV=1
Length = 575
Score = 37.7 bits (86), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 5 MFPFGSTLPSEAFVRLPDRSFHFQPVPGRLSWSRNYAAKGIKFICACSSLLFQ 57
M F S L S+A RL + + + R SWSRNYAAK +KF L+ +
Sbjct: 1 MHRFASGLASKA--RLARKGAN--QIASRSSWSRNYAAKDVKFGVEARGLMLK 49
>sp|Q03700|CARP4_RHINI Rhizopuspepsin-4 OS=Rhizopus niveus PE=3 SV=1
Length = 398
Score = 37.4 bits (85), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 58/157 (36%), Gaps = 31/157 (19%)
Query: 72 MYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAP 131
+ +G P LD DTGS W C C + DP +S +A
Sbjct: 94 VTVGTPGIKLKLDFDTGSSDLWF-ASTLCTNCGSSQTKY-----------DPSQSSTYAK 141
Query: 132 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASY 191
+ + Y DG S+ G+L KD G ++ ++ + + S
Sbjct: 142 DGRT--------WSISYGDGSSASGILGKDTVNL---GGLKIKNQI-IELAKREASSFSS 189
Query: 192 HPLDGILGLGKGKSSIVS-------QLHSQKLIRNVV 221
P DG+LGLG + VS L SQ LI N V
Sbjct: 190 GPSDGLLGLGFDSITTVSGVQTPMDNLISQGLISNPV 226
>sp|Q4WNV0|CTSD_ASPFU Aspartic-type endopeptidase ctsD OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ctsD
PE=1 SV=1
Length = 474
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 48/204 (23%)
Query: 68 YNVTMYIGQPARPYFLDLDTGSDLTWL-QCDAPCVRCV--EAPHPLYRPSNDLVPCEDPI 124
Y T+ +G + +L LDTG TW+ D V C E S L+P
Sbjct: 106 YFATVRVGSQGQQMWLVLDTGGPNTWVFGSDCTTVACQRHETFGEAASKSLKLLPL---- 161
Query: 125 CASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYN 184
++ + Y G S GVL D+ + L+ + G N
Sbjct: 162 ------------------NWAVGYGTGLVS-GVLGTDSLSL-----AGLDVNMTFGLAKN 197
Query: 185 QVPGASYHPLDGILGLGKGKS------SIVSQLHSQKLIR-NVVGHCLS----GGGGGFL 233
+P+DGILGLG+ + S + + +Q+L++ N++G S G G
Sbjct: 198 ASTDFESYPVDGILGLGRSANSNFNTPSFMETVATQRLLKSNIIGFSFSRNSDGARDGAA 257
Query: 234 FFGDDLYDSSR----VVWTSMSSD 253
FGD D++R +V+T+ + D
Sbjct: 258 NFGD--LDTTRFTGDIVYTNTTGD 279
>sp|P69476|NEP1_NEPDI Aspartic proteinase nepenthesin-1 (Fragments) OS=Nepenthes
distillatoria PE=1 SV=1
Length = 164
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 66 GYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPC 120
G Y + + IG PA+P+ +DTGSDL W Q P + P S +PC
Sbjct: 15 GEYLMXLSIGTPAQPFSAIMDTGSDLIWTQXQ-PXTQXFXQSDPQGSSSFSTLPC 68
>sp|C5FEK4|CTSD_ARTOC Probable aspartic-type endopeptidase CTSD (Fragment) OS=Arthroderma
otae (strain ATCC MYA-4605 / CBS 113480) GN=CTSD PE=3
SV=2
Length = 377
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 120 CEDPICASLHAPGHHNCEDPAQCDYELEYADG-GSSLGVLVKDAFAFNYTNGQRLNPRLA 178
C C + + G + + D + + A G G GV+V D +F G L+
Sbjct: 17 CTSKSCGAHNTFGKEDSKTIKVTDEKWDVAYGTGKVAGVIVNDTMSFA---GFELDT--P 71
Query: 179 LGCGYNQVPGASYHPLDGILGLGKGKS-----SIVSQLHSQKLIR-NVVGHCLS----GG 228
G +P+DGILG+G S +++ L QKL++ N++G L G
Sbjct: 72 FGSATTASDDFMSYPMDGILGIGPQDSKAKVPTVIQLLMQQKLLKSNIIGINLQRNSDGA 131
Query: 229 GGGFLFFGD 237
G + FGD
Sbjct: 132 TDGQITFGD 140
>sp|Q03699|CARP3_RHINI Rhizopuspepsin-3 OS=Rhizopus niveus PE=3 SV=1
Length = 391
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 59/174 (33%), Gaps = 36/174 (20%)
Query: 60 GNVYPTGYYNVTMY-----IGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPS 114
G V T YYN Y +G P LD DTGS W + C C + Y P+
Sbjct: 71 GYVPVTDYYNDIEYYGEVTVGTPGVTLKLDFDTGSSDLWF-ASSLCTNC-GSSQTKYNPN 128
Query: 115 NDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLN 174
D + + Y DG S+ G+L D +
Sbjct: 129 ESSTYARDGRT------------------WSISYGDGSSASGILGTDTVILGGLTIRHQT 170
Query: 175 PRLALGCGYNQVPGASYHPLDGILGLG-------KGKSSIVSQLHSQKLIRNVV 221
LA + P DG+LGLG +G + V L SQ LI N V
Sbjct: 171 IELA----RREASQFQSGPSDGLLGLGFDSITTVRGVKTPVDNLISQGLISNPV 220
>sp|P43231|CARP2_RHINI Rhizopuspepsin-2 OS=Rhizopus niveus PE=3 SV=2
Length = 391
Score = 34.7 bits (78), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 59/170 (34%), Gaps = 36/170 (21%)
Query: 60 GNVYPTGYYNVTMY-----IGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPS 114
G+V T YYN Y +G P LD DTGS W C C + Y P+
Sbjct: 71 GSVPVTDYYNDIEYYGKVTVGTPGVTLKLDFDTGSSDLWF-ASTLCTNC-GSSQTKYNPN 128
Query: 115 NDLVPCEDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLN 174
+D + + Y DG S+ G+L D +
Sbjct: 129 QSSTYAKDGRT------------------WSISYGDGSSASGILGTDTVTLGGLKITKQT 170
Query: 175 PRLALGCGYNQVPGASYHPLDGILGLG-------KGKSSIVSQLHSQKLI 217
LA + G SY G+LGLG +G + V L SQ LI
Sbjct: 171 IELAKREATSFQSGPSY----GLLGLGFDTITTVRGVKTPVDNLISQGLI 216
>sp|P17576|CARP_IRPLA Polyporopepsin OS=Irpex lacteus PE=1 SV=1
Length = 340
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 68 YNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRC 103
Y V + +G PA Y L +DTGS TWL D V+
Sbjct: 14 YVVNVGVGSPATTYSLLVDTGSSNTWLGADKSYVKT 49
>sp|Q29079|PAG2_PIG Pregnancy-associated glycoprotein 2 OS=Sus scrofa GN=PAG2 PE=2 SV=1
Length = 420
Score = 34.3 bits (77), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 68/190 (35%), Gaps = 36/190 (18%)
Query: 74 IGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGH 133
IG P + + + DTGS W+ P + C +R N P H
Sbjct: 82 IGTPPQQFSVVFDTGSSDLWV----PSIYCKSKACVTHRSFN---------------PSH 122
Query: 134 HNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHP 193
+ +LEY G S G L +D GQ + A G + A H
Sbjct: 123 SSTFHDRGKSIKLEYGSGKMS-GFLGQDTVRI----GQLTSTGQAFGLSKEETGKAFEHA 177
Query: 194 L-DGILGLG------KGKSSIVSQLHSQKLIRN-VVGHCLSGGG--GGFLFFG--DDLYD 241
+ DGILGL KG ++++ L Q I V LS G + FG D Y
Sbjct: 178 IFDGILGLAYPSIAIKGTTTVIDNLKKQDQISEPVFAFYLSSDKEEGSVVMFGGVDKKYY 237
Query: 242 SSRVVWTSMS 251
+ W ++
Sbjct: 238 KGDLKWVPLT 247
>sp|Q9GMY7|PEPA_RHIFE Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1
Length = 386
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 80/203 (39%), Gaps = 52/203 (25%)
Query: 71 TMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHA 130
T+ IG P + + + DTGS W+ PS V C P C+
Sbjct: 77 TIGIGTPPQEFTVIFDTGSSNLWV------------------PS---VYCSSPACS---- 111
Query: 131 PGHHNCEDPAQ------CDYELEYADG-GSSLGVLVKDAFAFNYTNGQRLNPRLALGCGY 183
+HN +P Q + +L A G GS G+L D G + G
Sbjct: 112 --NHNRFNPQQSSTYQGTNQKLSVAYGTGSMTGILGYDTVQV----GGITDTNQIFGLSE 165
Query: 184 NQVPGA--SYHPLDGILGLG------KGKSSIVSQLHSQKLI-RNVVGHCLSGG--GGGF 232
+ PG+ Y P DGILGL G + + + +Q L+ +++ LS GG
Sbjct: 166 TE-PGSFLYYAPFDGILGLAYPSIASSGATPVFDNIWNQGLVSQDLFSVYLSSNDQGGSV 224
Query: 233 LFFG--DDLYDSSRVVWTSMSSD 253
+ FG D Y + + W +SS+
Sbjct: 225 VMFGGIDSSYFTGNLNWVPLSSE 247
>sp|O13340|CARP_PODAS Podosporapepsin OS=Podospora anserina GN=PAPA PE=2 SV=1
Length = 425
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 46/136 (33%), Gaps = 25/136 (18%)
Query: 68 YNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICAS 127
Y + IG P + LDLDTGS W+ V +Y P+ S
Sbjct: 108 YVTPVTIGTPPQTLMLDLDTGSSDLWVFSSLTPSNQVRG-QEIYSPTKS--------STS 158
Query: 128 LHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFN--YTNGQRLNPRLALGCGYNQ 185
GH + + Y DG S G + D F Q + L + Q
Sbjct: 159 KLLSGH---------TWSIRYGDGSGSRGTVYTDNFTIGGLEVKSQAVQAALEVSSMLTQ 209
Query: 186 VPGASYHPLDGILGLG 201
LDG++GLG
Sbjct: 210 -----EQSLDGLVGLG 220
>sp|P55956|ASP3_CAEEL Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2
Length = 398
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 63/168 (37%), Gaps = 33/168 (19%)
Query: 63 YPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCED 122
Y Y + IG P + + + DTGS W+ PC C P D
Sbjct: 64 YSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWV----PCANC---------------PFGD 104
Query: 123 PICASLHAPGHHNCEDPAQC-----DYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRL 177
C +H +C+ + C +E++Y GS G + D F + +
Sbjct: 105 IAC-RMH--NRFDCKKSSSCTATGASFEIQYGT-GSMKGTVDNDVVCFGHDTTYCTDKNQ 160
Query: 178 ALGCGYNQVPGASY--HPLDGILGLGKGKSSI--VSQLHSQKLIRNVV 221
L C ++ PG ++ DGI G+G S+ +SQ Q + +
Sbjct: 161 GLACATSE-PGITFVAAKFDGIFGMGWDTISVNKISQPMDQIFANSAI 207
>sp|A8F7V1|MTNA2_THELT Methylthioribose-1-phosphate isomerase 2 OS=Thermotoga lettingae
(strain ATCC BAA-301 / DSM 14385 / TMO) GN=mtnA2 PE=3
SV=1
Length = 345
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 67 YYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCV----EAPH--PLYRPSNDLVPC 120
Y+NV +Y+ P L G D+ + A +RCV AP P++ P+ D+ P
Sbjct: 258 YHNVPLYVVAPTSTIDLKTPAGQDIPIEERSADEIRCVGNSQVAPQESPVFNPAFDVTPA 317
Query: 121 E 121
E
Sbjct: 318 E 318
>sp|P16228|CATE_RAT Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3
Length = 398
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 43/160 (26%)
Query: 71 TMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVE---APHPLYRPSNDLVPCEDPICAS 127
T+ IG P++ + + DTGS W+ P V C HP++ PS ++
Sbjct: 83 TVSIGSPSQNFTVIFDTGSSNLWV----PSVYCTSPACKAHPVFHPSQ---------SST 129
Query: 128 LHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFN--YTNGQRLNPRLALGCGYNQ 185
G+H + ++Y GS G++ D + GQ+ + +
Sbjct: 130 YMEVGNH---------FSIQYGT-GSLTGIIGADQVSVEGLTVEGQQFGESV-------K 172
Query: 186 VPGASY--HPLDGILGLG------KGKSSIVSQLHSQKLI 217
PG ++ DGILGLG G + + + +Q L+
Sbjct: 173 EPGQTFVNAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLV 212
>sp|P56272|PEP2B_GADMO Pepsin-2B OS=Gadus morhua PE=1 SV=1
Length = 324
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 66/177 (37%), Gaps = 33/177 (18%)
Query: 61 NVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPC 120
N T YY V + IG P + + DTGS W+ + C + H ++P
Sbjct: 8 NEADTEYYGV-ISIGTPPESFKVIFDTGSSNLWVSS-SHCSAQACSNHNKFKPRQSSTYV 65
Query: 121 EDPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALG 180
E +L Y GG G+L +D + G +P LG
Sbjct: 66 ETGKTV------------------DLTYGTGGMR-GILGQDTVSV----GGGSDPNQELG 102
Query: 181 CGYNQ-VPGASYHPLDGILGL------GKGKSSIVSQLHSQKLI-RNVVGHCLSGGG 229
+ P + P DGILGL G + + SQ L+ +++ LSGGG
Sbjct: 103 ESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGG 159
>sp|Q29RU0|RN128_BOVIN E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2
SV=1
Length = 431
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 16/107 (14%)
Query: 100 CVRCVEAPHPLYRPSNDLV-----------PCEDPICASLHAPGHHNCEDPAQCDYELEY 148
C C+E LY+P NDLV C DP C+ E++
Sbjct: 280 CAVCIE----LYKP-NDLVRILTCNHVFHKTCVDPWLLEHRTCPMCKCDILKALGIEVDV 334
Query: 149 ADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLD 195
DG SL V V + + N + + N GY V GA PL+
Sbjct: 335 EDGSVSLQVPVSNETSSNASPHEEDNRSETASSGYASVQGADEPPLE 381
>sp|P49996|DNAA_VIBHA Chromosomal replication initiator protein DnaA OS=Vibrio harveyi
GN=dnaA PE=3 SV=1
Length = 468
Score = 30.8 bits (68), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 56/149 (37%), Gaps = 24/149 (16%)
Query: 102 RCVEAPHPLYRPSNDLVPCEDPICASLHA--PGHHNCEDPAQCDYELEYADGGSSLGVLV 159
R V AP P + V E A L A P H +D AQ AD V
Sbjct: 81 RRVAAPKPAPTRTPADVAAESSAPAQLQARKPVHKTWDDDAQV-----IADINHRSNVNP 135
Query: 160 KDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSSI------------ 207
K F N+ G+ LA + PGA+Y+PL G G GK+ +
Sbjct: 136 KHKFN-NFVEGKSNQLGLAAARQVSDNPGAAYNPLFLYGGTGLGKTHLLHAVGNAIVDNN 194
Query: 208 ----VSQLHSQKLIRNVVGHCLSGGGGGF 232
V +HS++ ++++V + F
Sbjct: 195 PNAKVVYMHSERFVQDMVKALQNNAIEEF 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.462
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,697,421
Number of Sequences: 539616
Number of extensions: 5232676
Number of successful extensions: 9087
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 9023
Number of HSP's gapped (non-prelim): 56
length of query: 255
length of database: 191,569,459
effective HSP length: 115
effective length of query: 140
effective length of database: 129,513,619
effective search space: 18131906660
effective search space used: 18131906660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)