Citrus Sinensis ID: 025273

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
Protein Sequence
MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSRL
Secondary Structure (PSIPRED)
cccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccccEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEcccccHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHcHHHcEEEEEEEccEccHHHccccccHHHHHHHHccccccccEcHHHHHHHHHHHHcHHHccccccEEEEcccHEEEc
Coil and Loop (DISEMBL)
MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVChvsngqqrKNLINQTIEKFGKIDVVVSnaaanpsvdsILQTKESVLDKLWDINVKSSILLLQDaaphlqkgsSVVLISSiagyqpqssmamyGVTKTALLGLTKALAaemapdtrvncvapgfvpthfaeyitsndgvRQTIEQNTLLNRLGTTRDMAAAAAFLasddasyitGETLVVAGGMPSRL
Flexible Loop (DISEMBL)
MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVvssrkqknvdEAVVKLKARGIEVIGvvchvsngqqrkNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYItsndgvrqTIEQNTLLNRLGTTRDMAAAAAFLasddasyiTGETLvvaggmpsrl
Low Complexity Region (SEG)
MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIdvvvsnaaanpsvdsILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVtktallgltkalaaEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMaaaaaflasddasYITGETLVVAGGMPSRL
Disordered region (IsUnstruct)
*********FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA*******
Disordered Region (DISOPRED)
***********GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR*
Disordered Region (DISEMBL)
**********QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSRL
Disordered Region (DISPRO)
********RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSRL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	255	2.2.26 [Sep-21-2011]
Q9BTZ2	278	Dehydrogenase/reductase S	yes	no	1.0	0.917	0.488	8e-64
Q5RCF8	278	Dehydrogenase/reductase S	yes	no	1.0	0.917	0.484	2e-63
Q8WNV7	279	Dehydrogenase/reductase S	yes	no	0.972	0.888	0.462	4e-61
Q9GKX2	260	Dehydrogenase/reductase S	yes	no	0.952	0.934	0.495	4e-61
Q8SPU8	279	Dehydrogenase/reductase S	yes	no	1.0	0.913	0.473	7e-61
Q8VID1	279	Dehydrogenase/reductase S	yes	no	0.952	0.870	0.479	2e-60
Q99LB2	279	Dehydrogenase/reductase S	yes	no	0.952	0.870	0.479	2e-60
Q13268	258	Dehydrogenase/reductase S	no	no	0.929	0.918	0.464	7e-59
P0CG22	281	Putative dehydrogenase/re	no	no	0.952	0.864	0.417	3e-50
Q6PKH6	230	Dehydrogenase/reductase S	no	no	0.717	0.795	0.489	6e-43

>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3

 Score =  243 bits (621), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 127/260 (48%), Positives = 168/260 (64%), Gaps = 5/260 (1%)

Query: 1   MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
           M    M +R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD+AV  L+ 
Sbjct: 19  MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 78

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G+ V G VCHV   + R+ L+   ++  G ID++VSNAA NP   SI+   E V DK  
Sbjct: 79  EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 138

Query: 119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
           DINVK+  L+ +   P ++K  G SVV++SSIA + P    + Y V+KTALLGLTK LA 
Sbjct: 139 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 198

Query: 177 EMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
           E+AP + RVNC+APG + T F+  +  +    +++++   + RLG   D A   +FL S+
Sbjct: 199 ELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSE 258

Query: 236 DASYITGETLVVAGGMPSRL 255
           DASYITGET+VV GG PSRL
Sbjct: 259 DASYITGETVVVGGGTPSRL 278

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.
Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 8EC: 4

>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3

 Score =  242 bits (618), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 126/260 (48%), Positives = 168/260 (64%), Gaps = 5/260 (1%)

Query: 1   MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
           M    M +R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD+AV  L+ 
Sbjct: 19  MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 78

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G+ V G VCHV   + R+ L+   ++  G ID++VSNAA NP   S++   E V DK  
Sbjct: 79  EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTL 138

Query: 119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
           DINVK+  L+ +   P ++K  G SVV++SSIA + P    + Y V+KTALLGLTK LA 
Sbjct: 139 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 198

Query: 177 EMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
           E+AP + RVNC+APG + T F+  +  +    +++++   + RLG   D A   +FL S+
Sbjct: 199 ELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSE 258

Query: 236 DASYITGETLVVAGGMPSRL 255
           DASYITGET+VV GG PSRL
Sbjct: 259 DASYITGETVVVGGGTPSRL 278

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8WNV7|DHRS4_PIG Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=2

 Score =  234 bits (598), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 116/251 (46%), Positives = 166/251 (66%), Gaps = 3/251 (1%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           K  + KVA+VTAST GIG  IA RL  +GA VVVSSRKQ+NVD  V  L+  G+ V G V
Sbjct: 29  KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 88

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           CHV   + R+ L+   +   G +D++VSNAA NP   +I+   E V DK+  +NVK+++L
Sbjct: 89  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 148

Query: 128 LLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           + +   P ++K  G SV+++SS+  Y P  ++  Y V+KTALLGLTK LA E+AP + RV
Sbjct: 149 MTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRV 208

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           NC+APG + T+F++ +  +   ++ ++++  + RLG   D A   +FL S+DASYITGET
Sbjct: 209 NCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGET 268

Query: 245 LVVAGGMPSRL 255
           +VV GG  SRL
Sbjct: 269 VVVGGGTASRL 279

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q9GKX2|DHRS4_RABIT Dehydrogenase/reductase SDR family member 4 (Fragment) OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1

 Score =  234 bits (598), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 122/246 (49%), Positives = 162/246 (65%), Gaps = 3/246 (1%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVAIVTAST GIG  IA RL  +GA VV+SSRKQ+NVD AV  L+A G+ V G VCHV  
Sbjct: 15  KVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGK 74

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            + R+ L+   +   G ID++VSNAA NP    ++   E V DK+ DINVK+  L+ +  
Sbjct: 75  AEDRERLVATALNLHGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAV 134

Query: 133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P ++K  G SVV+++SIA + P S +  Y V+KTAL+GLTK LA E+A  + RVNC+AP
Sbjct: 135 VPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAP 194

Query: 190 GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG 249
           G + T F++ +  +    + I Q   + RLG   + A   +FL S+DASYITGET+VVAG
Sbjct: 195 GLIKTSFSKALWEDKAQEENIIQKLRIRRLGKPEECAGIVSFLCSEDASYITGETVVVAG 254

Query: 250 GMPSRL 255
           G PSRL
Sbjct: 255 GAPSRL 260

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Oryctolagus cuniculus (taxid: 9986)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=2

 Score =  233 bits (595), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 123/260 (47%), Positives = 168/260 (64%), Gaps = 5/260 (1%)

Query: 1   MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
           M    MA+R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD AV  LK 
Sbjct: 20  MASCGMARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKG 79

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G+ V G VCHV   + R+ L+   ++  G +D+++SNAA +P   S++   E V DK+ 
Sbjct: 80  EGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKIL 139

Query: 119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
           D+NVK++ LL +   P + K  G S+V++SSIA Y P  S+  Y V+KTALLGLTK LA 
Sbjct: 140 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLAL 199

Query: 177 EMA-PDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
           E+A  + RVNC+APG + T F+  +  +   +++I+    + R+G   + A   +FL S+
Sbjct: 200 ELAESNVRVNCLAPGLIRTSFSRVLWEDPARQESIKATFQIKRIGKPEECAGIVSFLCSE 259

Query: 236 DASYITGETLVVAGGMPSRL 255
           DASYITGET+VVAGG  S L
Sbjct: 260 DASYITGETVVVAGGSLSHL 279

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8VID1|DHRS4_RAT Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=2

 Score =  232 bits (592), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 118/246 (47%), Positives = 162/246 (65%), Gaps = 3/246 (1%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VTAST GIG  IA RL  +GA VV+SSRKQ+NVD AV  L+  G+ V GVVCHV  
Sbjct: 34  KVALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCHVGK 93

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            + R+ L+N  ++    ID++VSNAA NP   +++   E V +K+  INV +S ++++  
Sbjct: 94  AEDREKLVNMALKLHQGIDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMIKAV 153

Query: 133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P ++K  G SVV++SS+AG+    S+  Y V+KTALLGLTK  AAE+AP + RVNC+AP
Sbjct: 154 VPAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAP 213

Query: 190 GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG 249
           G + THF+  +       + I++   + RLG   D     +FL S+DASYI GET+VV G
Sbjct: 214 GLIKTHFSSVLWKEKAREEMIKETMQIRRLGKPEDCVGIVSFLCSEDASYINGETVVVGG 273

Query: 250 GMPSRL 255
           G PSRL
Sbjct: 274 GTPSRL 279

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q99LB2|DHRS4_MOUSE Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=3

 Score =  232 bits (592), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 118/246 (47%), Positives = 161/246 (65%), Gaps = 3/246 (1%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD AV  L+  G+ V G+VCHV  
Sbjct: 34  KVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGK 93

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            + R+ LI   +++   ID++VSNAA NP   +++   E V DK+  INV ++ ++++  
Sbjct: 94  AEDREKLITTALKRHQGIDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAV 153

Query: 133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P ++K  G SVV++ S+AG+    S+  Y V+KTALLGLTK  AAE+AP + RVNC+AP
Sbjct: 154 VPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAP 213

Query: 190 GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG 249
           G + T F+  +         I++   + RLG   D A   +FL S+DASYI GET+VV G
Sbjct: 214 GLIKTRFSSVLWEEKAREDFIKEAMQIRRLGKPEDCAGIVSFLCSEDASYINGETVVVGG 273

Query: 250 GMPSRL 255
           G PSRL
Sbjct: 274 GTPSRL 279

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q13268|DHRS2_HUMAN Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3

 Score =  227 bits (578), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 111/239 (46%), Positives = 158/239 (66%), Gaps = 2/239 (0%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT ST GIGF IA RL  +GA VV+SSRKQ+NVD A+ KL+  G+ V G+VCHV  
Sbjct: 15  RVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGK 74

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            + R+ L+ + +E  G +D +V +A  NP V S L T E + DK+  +NVKS  LLL   
Sbjct: 75  AEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQL 134

Query: 133 APHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG 190
            P+++ +  +V+L+SSIA Y P  ++ +Y V+KTALLGLT+ LA E+AP D RVNCV PG
Sbjct: 135 LPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPG 194

Query: 191 FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG 249
            + T F++    N+ + +  +++  L R+G + D A   +FL S DASY+ GE + VAG
Sbjct: 195 IIKTDFSKVFHGNESLWKNFKEHHQLQRIGESEDCAGIVSFLCSPDASYVNGENIAVAG 253

Displays NADPH-dependent dicarbonyl reductase activity in vitro with 3,4-Hexanedione, 2,3-Heptanedione and 1-Phenyl-1,2-propanedione as substrates. No reductase activity is displayed in vitro with steroids, retinoids and sugars as substrates. May inhibit cell replication.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P0CG22|DR4L1_HUMAN Putative dehydrogenase/reductase SDR family member 4-like 2 OS=Homo sapiens GN=DHRS4L1 PE=5 SV=1

 Score =  198 bits (504), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 104/249 (41%), Positives = 157/249 (63%), Gaps = 6/249 (2%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VTAST  IGF +A+RL  +GA VVVS RKQ+NVD+AV  L+  G+ + G VCHV  
Sbjct: 33  KVALVTASTDWIGFAVAQRLAQDGAHVVVSRRKQQNVDQAVATLQGEGLSMTGTVCHVGK 92

Query: 73  GQQRKNLINQTIEKFGKIDVV---VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
            +  + L+   ++  G ID++   ++N+       ++LQT E   D+  DIN K+  L++
Sbjct: 93  MKDWERLVATAMKLHGVIDILSLSITNSKRGLFWFTLLQTAEEAWDRNLDINGKALALMI 152

Query: 130 QDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
           +   P ++K  G SV  ++S+A ++P    + Y V+KTALLGL K LA E+AP + RVNC
Sbjct: 153 KAVVPEMEKRGGGSVGFLASVAAFRPLPGFSPYNVSKTALLGLNKTLAIELAPRNIRVNC 212

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV 246
           +APG + T F+  +  +    +++++   + RLG   D     +FL S+DASY+TGET++
Sbjct: 213 LAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDSLGIVSFLCSEDASYLTGETVM 272

Query: 247 VAGGMPSRL 255
           V GG PSRL
Sbjct: 273 VGGGTPSRL 281

Putative oxidoreductase.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q6PKH6|DR4L2_HUMAN Dehydrogenase/reductase SDR family member 4-like 2 OS=Homo sapiens GN=DHRS4L2 PE=2 SV=1

 Score =  174 bits (441), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 92/188 (48%), Positives = 122/188 (64%), Gaps = 5/188 (2%)

Query: 5   KMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           +M +R     KVA+VTAST GIGF IA RL  + A VVVSSRKQ+NVD+AV  L+  G+ 
Sbjct: 21  RMTRRDPLTNKVALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQNVDQAVATLQGEGLS 80

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V G VCHV   + R+ L+   ++  G ID++VSNAA NP   S++   E V DK  DINV
Sbjct: 81  VTGTVCHVGKAEDRERLVAMAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINV 140

Query: 123 KSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           K+  L+ +   P ++K  G SVV++SSIA + P    + Y V+KTALLGL   LA E+AP
Sbjct: 141 KAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLNNTLAIELAP 200

Query: 181 -DTRVNCV 187
            + RVNC+
Sbjct: 201 RNIRVNCL 208

Probable oxidoreductase.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
449455366	255	PREDICTED: dehydrogenase/reductase SDR f	0.984	0.984	0.812	1e-118
224113857	256	predicted protein [Populus trichocarpa]	0.992	0.988	0.790	1e-116
388514295	252	unknown [Lotus japonicus]	0.988	1.0	0.793	1e-116
380039554	258	tropinone reductase-like 3 [Erythroxylum	0.992	0.980	0.786	1e-115
351724665	252	peroxisomal short-chain dehydrogenase/re	0.988	1.0	0.789	1e-115
357480421	252	Dehydrogenase/reductase SDR family membe	0.988	1.0	0.785	1e-113
297813813	254	short-chain dehydrogenase/reductase fami	0.996	1.0	0.788	1e-112
18412959	254	dehydrogenase/reductase SDR family membe	0.996	1.0	0.784	1e-112
358248906	255	uncharacterized protein LOC100809582 [Gl	1.0	1.0	0.760	1e-112
388508300	252	unknown [Medicago truncatula]	0.988	1.0	0.773	1e-111

>gi|449455366|ref|XP_004145424.1| PREDICTED: dehydrogenase/reductase SDR family member 4-like [Cucumis sativus] gi|449531127|ref|XP_004172539.1| PREDICTED: dehydrogenase/reductase SDR family member 4-like [Cucumis sativus]

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/251 (81%), Positives = 229/251 (91%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           K+ KRF+GKVAIVTASTQGIGF IA RL  EGASVV+SSR+Q+NVDEAV KLKA+G+EV+
Sbjct: 5   KIGKRFEGKVAIVTASTQGIGFEIARRLAFEGASVVISSRRQRNVDEAVEKLKAQGLEVL 64

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
           G+VCHVSN QQRKNL+ +TI+K+GKIDVVVSNAA NPSVDSIL+TKESVLDKLWDINVK+
Sbjct: 65  GIVCHVSNAQQRKNLVEKTIQKYGKIDVVVSNAAVNPSVDSILKTKESVLDKLWDINVKA 124

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRV 184
           S+LLLQD APHLQKGSSVVLISSI GY P S +AMYGVTKTALLGLTKALAAEMAPDTRV
Sbjct: 125 SVLLLQDVAPHLQKGSSVVLISSIEGYNPSSLLAMYGVTKTALLGLTKALAAEMAPDTRV 184

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           NCVAPGFVPTHFA+++ +N+ +R+ +E  TLLNRLGTT DMAAA AFLASDDASYITGE 
Sbjct: 185 NCVAPGFVPTHFADFLVTNEAIRKGVESKTLLNRLGTTEDMAAATAFLASDDASYITGEI 244

Query: 245 LVVAGGMPSRL 255
           LVVAGGMPSRL
Sbjct: 245 LVVAGGMPSRL 255

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113857|ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|118487888|gb|ABK95766.1| unknown [Populus trichocarpa] gi|222859658|gb|EEE97205.1| predicted protein [Populus trichocarpa]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/253 (79%), Positives = 225/253 (88%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           K+   KRF+GKV IVTASTQGIGF IAER GLEGASVV+SSRKQKNVDEA  KLKA+GI+
Sbjct: 4   KIISGKRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAAEKLKAKGIK 63

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V+GVVCHVSN QQRKNLI  T++K+GKID+VVSNAA NPS DSIL+T+ESVLDKLW+INV
Sbjct: 64  VLGVVCHVSNAQQRKNLIETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINV 123

Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
           K++ILLL+DA PH++KGSSV+LISSI GY P SSMAMYGVTKTAL GLTK LAAEMAP T
Sbjct: 124 KAAILLLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVTKTALFGLTKVLAAEMAPHT 183

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           RVNC+APGFVPTHFA++IT N  +R+TIE  TLL RLGTT DMA+A AFLASDDASYITG
Sbjct: 184 RVNCIAPGFVPTHFADFITGNQTIRKTIEDQTLLKRLGTTDDMASAVAFLASDDASYITG 243

Query: 243 ETLVVAGGMPSRL 255
           ETLVVAGGMPSRL
Sbjct: 244 ETLVVAGGMPSRL 256

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514295|gb|AFK45209.1| unknown [Lotus japonicus]

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/252 (79%), Positives = 231/252 (91%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M++ KRF+GKVAIVTASTQG GF IAERLGLEGASVV+SSRKQ+NVD A  KL+A+GI+V
Sbjct: 1   MEIPKRFRGKVAIVTASTQGTGFSIAERLGLEGASVVISSRKQQNVDAAAEKLRAKGIDV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           + VVCHVSN QQRKNLI++T++K+GKIDVVVSNAAANPSVD+ILQTK++VLDKLW+INVK
Sbjct: 61  LAVVCHVSNAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDTVLDKLWEINVK 120

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
           +SILLL+DAAPH+QKGSSVV+ISSIAGY P  +MAMYGVTKTALLGLTKALA EMAP+TR
Sbjct: 121 ASILLLKDAAPHMQKGSSVVIISSIAGYNPPPAMAMYGVTKTALLGLTKALAGEMAPNTR 180

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           VNCVAPGFVPT+FA +ITSND +RQ +E  T+L RLGTT DM AA AFLAS+DASYITGE
Sbjct: 181 VNCVAPGFVPTNFASFITSNDAMRQELEGKTILGRLGTTEDMGAATAFLASEDASYITGE 240

Query: 244 TLVVAGGMPSRL 255
           TLVV+GGMPSRL
Sbjct: 241 TLVVSGGMPSRL 252

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|380039554|gb|AFD32321.1| tropinone reductase-like 3 [Erythroxylum coca]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/253 (78%), Positives = 231/253 (91%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           K  + +RF+GKVAIVTASTQGIGF IA RLGLEGA+VV+SSRKQKNVDEAV KLKA+GIE
Sbjct: 6   KKMIGRRFEGKVAIVTASTQGIGFAIAYRLGLEGAAVVISSRKQKNVDEAVEKLKAQGIE 65

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V+GVVCHVSN +QRKNLI+ T++K+GKIDVVVSNAAANPS D++L+T+ESVLDK+W+INV
Sbjct: 66  VLGVVCHVSNSKQRKNLIDTTVKKYGKIDVVVSNAAANPSTDALLETQESVLDKIWEINV 125

Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
           K+SILLLQ+AAPHLQKGSSVVLISSI GYQP +SMAMYGVTKTALLGLTKALA EMAP  
Sbjct: 126 KASILLLQEAAPHLQKGSSVVLISSITGYQPPASMAMYGVTKTALLGLTKALAEEMAPYV 185

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           RVNCVAPGFVPT+FA+Y+T N+ +R ++E+ T L RLGTT+DMA+A AFLASDDASYITG
Sbjct: 186 RVNCVAPGFVPTNFADYLTRNEDIRNSLEEKTFLKRLGTTQDMASATAFLASDDASYITG 245

Query: 243 ETLVVAGGMPSRL 255
           ET+VVAGG PSRL
Sbjct: 246 ETVVVAGGTPSRL 258

Source: Erythroxylum coca

Species: Erythroxylum coca

Genus: Erythroxylum

Family: Erythroxylaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724665|ref|NP_001238345.1| peroxisomal short-chain dehydrogenase/reductase family protein [Glycine max] gi|167962017|dbj|BAG09366.1| peroxisomal short-chain dehydrogenase/reductase family protein [Glycine max]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/252 (78%), Positives = 232/252 (92%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M+  KRF+GKVAIVTASTQGIG  IAERLGLEGASVV+SSRKQ+NVD A  +L+A+GI+V
Sbjct: 1   METPKRFEGKVAIVTASTQGIGLAIAERLGLEGASVVISSRKQQNVDAAAEQLRAKGIQV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           +GVVCHVS+ QQRKNLI++T++K+GKIDVVVSNAAANPSVD+ILQTK+SVLDKLW+INVK
Sbjct: 61  LGVVCHVSSAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDSVLDKLWEINVK 120

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
           ++ILLL+DA PHLQKGSSVV+ISSIAG+ P  S+AMYGVTKTALLGLTKALAAEMAP+TR
Sbjct: 121 ATILLLKDAVPHLQKGSSVVIISSIAGFNPPPSLAMYGVTKTALLGLTKALAAEMAPNTR 180

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           VNCVAPGFVPT+FA +ITSND V++ +E+ TLL RLGTT DM AAAAFLASDDA+YITGE
Sbjct: 181 VNCVAPGFVPTNFASFITSNDAVKKELEEKTLLGRLGTTEDMGAAAAFLASDDAAYITGE 240

Query: 244 TLVVAGGMPSRL 255
           T+VVAGG PSRL
Sbjct: 241 TIVVAGGTPSRL 252

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357480421|ref|XP_003610496.1| Dehydrogenase/reductase SDR family member [Medicago truncatula] gi|355511551|gb|AES92693.1| Dehydrogenase/reductase SDR family member [Medicago truncatula]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/252 (78%), Positives = 228/252 (90%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M++ KRF+GKVAIVTASTQGIGF IAERLGLEGASVV+SSR+QKNVD A  KL+A+GI+V
Sbjct: 1   MEIPKRFKGKVAIVTASTQGIGFTIAERLGLEGASVVISSRRQKNVDVAAEKLRAKGIDV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             VVCHVSN  QRK+LI++T++K+GKIDVVVSNAAANPSVDSILQT++SVLDKLW+INVK
Sbjct: 61  FAVVCHVSNALQRKDLIDKTVQKYGKIDVVVSNAAANPSVDSILQTQDSVLDKLWEINVK 120

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
           ++ILLL+DAAP+L KGSSVV+ISSIAGY P +SMAMYGVTKTALLGLTKALA EMAP TR
Sbjct: 121 ATILLLKDAAPYLPKGSSVVIISSIAGYHPPASMAMYGVTKTALLGLTKALAGEMAPKTR 180

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           VNCVAPGFVPT+FA +ITSN  +R+ +E  TLL RLGTT DM AA AFLASDDASYITGE
Sbjct: 181 VNCVAPGFVPTNFASFITSNSAMREELEAKTLLGRLGTTEDMGAATAFLASDDASYITGE 240

Query: 244 TLVVAGGMPSRL 255
           T+VV+GGMPSRL
Sbjct: 241 TIVVSGGMPSRL 252

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297813813|ref|XP_002874790.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320627|gb|EFH51049.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/255 (78%), Positives = 228/255 (89%), Gaps = 1/255 (0%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           MEK K+ +R +GKVAIVTASTQGIGFGI ER GLEGASVVVSSRKQ NVDEAV KLK++G
Sbjct: 1   MEK-KLPRRLEGKVAIVTASTQGIGFGIIERFGLEGASVVVSSRKQANVDEAVAKLKSKG 59

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
           I+  G+VCHVSN Q R+NL+ +T++K+GKID+VV NAAANPS D IL +KE+VLDKLW+I
Sbjct: 60  IDAYGIVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEI 119

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           NVKSSILLLQD APHL+KGSSV+ I+SIAG+QPQ +MAMYGVTKTALLGLTKALAAEMAP
Sbjct: 120 NVKSSILLLQDMAPHLEKGSSVIFITSIAGFQPQGAMAMYGVTKTALLGLTKALAAEMAP 179

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
           DTRVN VAPGFVPTHFA +IT +  VR+ IE+ TLLNRLGTT DMAAAAAFLASDD+SYI
Sbjct: 180 DTRVNAVAPGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYI 239

Query: 241 TGETLVVAGGMPSRL 255
           TGETLVVAGGMPSRL
Sbjct: 240 TGETLVVAGGMPSRL 254

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412959|ref|NP_567300.1| dehydrogenase/reductase SDR family member 4 [Arabidopsis thaliana] gi|5732060|gb|AAD48959.1|AF147263_1 contains similarity to Pfam families PF00106 (short chain dehydrogenase; score=151.7, E=1.3e-41, N=1) and PF00678 (Short chain dehydrogenase/reductase C-terminus; score=48.9, E=1.1e-10, N=1) [Arabidopsis thaliana] gi|7267313|emb|CAB81095.1| AT4g05530 [Arabidopsis thaliana] gi|14334866|gb|AAK59611.1| unknown protein [Arabidopsis thaliana] gi|21281153|gb|AAM44948.1| unknown protein [Arabidopsis thaliana] gi|21593394|gb|AAM65343.1| putative tropinone reductase [Arabidopsis thaliana] gi|332657132|gb|AEE82532.1| dehydrogenase/reductase SDR family member 4 [Arabidopsis thaliana]

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/255 (78%), Positives = 227/255 (89%), Gaps = 1/255 (0%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           MEK K+ +R +GKVAIVTASTQGIGFGI ER GLEGASVVVSSRKQ NVDEAV KLK++G
Sbjct: 1   MEK-KLPRRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKG 59

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
           I+  G+VCHVSN Q R+NL+ +T++K+GKID+VV NAAANPS D IL +KE+VLDKLW+I
Sbjct: 60  IDAYGIVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEI 119

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           NVKSSILLLQD APHL+KGSSV+ I+SIAG+ PQ +MAMYGVTKTALLGLTKALAAEMAP
Sbjct: 120 NVKSSILLLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAP 179

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
           DTRVN VAPGFVPTHFA +IT +  VR+ IE+ TLLNRLGTT DMAAAAAFLASDD+SYI
Sbjct: 180 DTRVNAVAPGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYI 239

Query: 241 TGETLVVAGGMPSRL 255
           TGETLVVAGGMPSRL
Sbjct: 240 TGETLVVAGGMPSRL 254

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248906|ref|NP_001240216.1| uncharacterized protein LOC100809582 [Glycine max] gi|255646869|gb|ACU23905.1| unknown [Glycine max]

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/255 (76%), Positives = 223/255 (87%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           ME  K+ KRFQGKVAIVTAST GIGF IAERLGLEGASVV+SSRKQ+NVDEA  KL+A+G
Sbjct: 1   MEITKLGKRFQGKVAIVTASTLGIGFSIAERLGLEGASVVISSRKQQNVDEAAGKLRAKG 60

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
           IEV+ VVCHVSN QQRKNLI++T++K+GKIDVVVSNAA +PSVD ILQT+ES+LDKLW+I
Sbjct: 61  IEVLAVVCHVSNAQQRKNLIDKTLQKYGKIDVVVSNAAVHPSVDPILQTQESILDKLWEI 120

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           NVKS+ILLL+DAAPHL+KGSSVVLI+S+  Y P  +MAMYGVTKTA+LGLTKA+A+EM P
Sbjct: 121 NVKSTILLLKDAAPHLKKGSSVVLIASLVAYNPPPTMAMYGVTKTAVLGLTKAMASEMGP 180

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
           +TRVNCV PG VPTHF    TSND  R+ +E+  LL RLGTT DMAAA AFLASDDASYI
Sbjct: 181 NTRVNCVVPGIVPTHFVALYTSNDATREELERKALLGRLGTTEDMAAATAFLASDDASYI 240

Query: 241 TGETLVVAGGMPSRL 255
           TGE LVV+GGMPSRL
Sbjct: 241 TGENLVVSGGMPSRL 255

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508300|gb|AFK42216.1| unknown [Medicago truncatula]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/252 (77%), Positives = 226/252 (89%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M++ KRF+GKVAIVTASTQGIGF +AERLGLEGASV +SSR+QKNVD A  KL+A+GI+V
Sbjct: 1   MEIPKRFKGKVAIVTASTQGIGFTVAERLGLEGASVAISSRRQKNVDVAAEKLRAKGIDV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             VVCHVSN  QRK+LI++T++K+GKIDVV SNAAANPSVDSILQT++SVLDKLW+INVK
Sbjct: 61  FAVVCHVSNALQRKDLIDKTVQKYGKIDVVASNAAANPSVDSILQTQDSVLDKLWEINVK 120

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
           ++ILLL+DAAP+L KGSSVV+ISSIAGY P +SMAMYGVTKTALLGLTKALA EMAP TR
Sbjct: 121 ATILLLKDAAPYLPKGSSVVIISSIAGYHPPASMAMYGVTKTALLGLTKALAGEMAPKTR 180

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           VNCVAPGFVPT+FA +ITSN  +R+ +E  TLL RLGTT DM AA AFLASDDASYITGE
Sbjct: 181 VNCVAPGFVPTNFASFITSNFAMREELEAKTLLGRLGTTEDMGAATAFLASDDASYITGE 240

Query: 244 TLVVAGGMPSRL 255
           T+VV+GGMPSRL
Sbjct: 241 TIVVSGGMPSRL 252

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
TAIR|locus:2135467	254	IBR1 "indole-3-butyric acid re	0.996	1.0	0.639	1.2e-81
FB|FBgn0035588	317	CG10672 [Drosophila melanogast	0.972	0.782	0.422	2.3e-48
ZFIN|ZDB-GENE-040426-1498	276	zgc:65987 "zgc:65987" [Danio r	0.980	0.905	0.415	6.9e-47
UNIPROTKB|Q9BTZ2	278	DHRS4 "Dehydrogenase/reductase	1.0	0.917	0.384	1.2e-42
UNIPROTKB|F1MZD5	279	DHRS4 "Dehydrogenase/reductase	1.0	0.913	0.376	1.1e-41
UNIPROTKB|Q8SPU8	279	DHRS4 "Dehydrogenase/reductase	1.0	0.913	0.376	1.7e-41
UNIPROTKB|Q9GKX2	260	DHRS4 "Dehydrogenase/reductase	0.952	0.934	0.394	1.7e-41
UNIPROTKB|Q8WNV7	279	DHRS4 "Dehydrogenase/reductase	0.972	0.888	0.358	7.5e-41
RGD|708482	279	Dhrs4 "dehydrogenase/reductase	0.952	0.870	0.378	2e-40
UNIPROTKB|D3DS54	280	DHRS2 "Dehydrogenase/reductase	0.929	0.846	0.364	3.3e-40

TAIR|locus:2135467 IBR1 "indole-3-butyric acid response 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
 Identities = 163/255 (63%), Positives = 188/255 (73%)

Query:     1 MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
             MEK K+ +R +GKVAIVTASTQGIGFGI ER GLEGASVVVSSRKQ NVDEAV KLK++G
Sbjct:     1 MEK-KLPRRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKG 59

Query:    61 IEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDI 120
             I+  G+VCHVSN Q R+NL+ +T++K+GKI               IL +KE+VLDKLW+I
Sbjct:    60 IDAYGIVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEI 119

Query:   121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 180
             NVKSSILLLQD APHL+KGSSV+ I+SIAG+ PQ +MAMYGV              EMAP
Sbjct:   120 NVKSSILLLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAP 179

Query:   181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYI 240
             DTRVN VAPGFVPTHFA +IT +  VR+ IE+ TLLNRLGTT DM             YI
Sbjct:   180 DTRVNAVAPGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYI 239

Query:   241 TGETLVVAGGMPSRL 255
             TGETLVVAGGMPSRL
Sbjct:   240 TGETLVVAGGMPSRL 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IDA

GO:0080024 "indolebutyric acid metabolic process" evidence=IMP

GO:0080026 "response to indolebutyric acid stimulus" evidence=IMP

GO:0048767 "root hair elongation" evidence=IMP

FB|FBgn0035588 CG10672 [Drosophila melanogaster (taxid:7227)]

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 106/251 (42%), Positives = 145/251 (57%)

Query:     8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
             KR  GKVA+VTAST GIGF IA+RL  +GA+VV+SSRKQKNVD A+ +L+   + V G+ 
Sbjct:    67 KRLAGKVAVVTASTDGIGFAIAKRLAEDGAAVVISSRKQKNVDSALAELRKLNLNVHGLK 126

Query:    68 CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             CHVS  + RK L  +TI KFGK+               +L+  E V DK++D+NVKSS L
Sbjct:   127 CHVSEPEDRKQLFEETISKFGKLNILVSNAATNPAVGGVLECDEKVWDKIFDVNVKSSYL 186

Query:   128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
             L ++A P L  QK SS+V +SSIAGY     +  Y V              ++AP+  RV
Sbjct:   187 LAKEALPLLRQQKNSSIVFVSSIAGYDAFELLGAYSVSKTALIGLTKAAAKDLAPEGIRV 246

Query:   185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGET 244
             NC+APG + T F++ +  N+   +       + RLGT+ +M             YITGE+
Sbjct:   247 NCLAPGVIRTKFSKALYENESANEAALSKIPMGRLGTSEEMAGVVSFLVSEDAGYITGES 306

Query:   245 LVVAGGMPSRL 255
             +V  GGM +RL
Sbjct:   307 IVAGGGMTARL 317

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

ZFIN|ZDB-GENE-040426-1498 zgc:65987 "zgc:65987" [Danio rerio (taxid:7955)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 105/253 (41%), Positives = 143/253 (56%)

Query:     6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
             +++   GKVAIVTAST GIG   AE LG  GA VVVSSR+Q NVD+AV  L+++ I+VIG
Sbjct:    24 ISQNLSGKVAIVTASTDGIGLAAAEALGQRGAHVVVSSRRQTNVDKAVSLLRSKNIKVIG 83

Query:    66 VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
               C+V   + R+ LIN T+E+ G +               IL + E V DK+  +NVK+S
Sbjct:    84 TTCNVGKAEDREKLINMTVEQCGGVDILVSNAAVNPFFGNILDSTEEVWDKILGVNVKAS 143

Query:   126 ILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT- 182
              LL +   PH++K  G SVV++SS+AGYQP  ++  Y V              E+A    
Sbjct:   144 FLLTKMVVPHIEKRGGGSVVIVSSVAGYQPMPALGPYSVSKTALLGLTRALAPELAQSNI 203

Query:   183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITG 242
             RVNCVAPG + T F+  +  N+GV +   + T + RLG   ++             YITG
Sbjct:   204 RVNCVAPGIIKTRFSSALWENEGVLEEFLKQTSIKRLGQPEEIGGVIAFLCSDEASYITG 263

Query:   243 ETLVVAGGMPSRL 255
             ET+ V GGM SRL
Sbjct:   264 ETITVTGGMNSRL 276

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

UNIPROTKB|Q9BTZ2 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 100/260 (38%), Positives = 136/260 (52%)

Query:     1 MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
             M    M +R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD+AV  L+ 
Sbjct:    19 MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 78

Query:    59 RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
              G+ V G VCHV   + R+ L+   ++  G I               I+   E V DK  
Sbjct:    79 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 138

Query:   119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
             DINVK+  L+ +   P ++K  G SVV++SSIA + P    + Y V              
Sbjct:   139 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 198

Query:   177 EMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXX 235
             E+AP + RVNC+APG + T F+  +  +    +++++   + RLG   D           
Sbjct:   199 ELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSE 258

Query:   236 XXXYITGETLVVAGGMPSRL 255
                YITGET+VV GG PSRL
Sbjct:   259 DASYITGETVVVGGGTPSRL 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0005739 "mitochondrion" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IDA;TAS

GO:0006066 "alcohol metabolic process" evidence=IDA

GO:0008202 "steroid metabolic process" evidence=IDA

GO:0042180 "cellular ketone metabolic process" evidence=IDA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=IDA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IDA

GO:0000253 "3-keto sterol reductase activity" evidence=IDA

GO:0018455 "alcohol dehydrogenase [NAD(P)+

GO:0051262 "protein tetramerization" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0005102 "receptor binding" evidence=IPI

UNIPROTKB|F1MZD5 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Bos taurus (taxid:9913)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 98/260 (37%), Positives = 137/260 (52%)

Query:     1 MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
             M    MA+R   + KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD AV  LK 
Sbjct:    20 MASCGMARRNPLENKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKG 79

Query:    59 RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
              G+ V G VCHV   + R+ L+   ++  G +               ++   E V DK+ 
Sbjct:    80 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKIL 139

Query:   119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
             D+NVK++ LL +   P + K  G S+V++SSIA Y P  S+  Y V              
Sbjct:   140 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLAL 199

Query:   177 EMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXX 235
             E+A  + RVNC+APG + T F+  +  +   +++I+    + R+G   +           
Sbjct:   200 ELAESNVRVNCLAPGLIRTSFSRVLWEDPARQESIKATFQIKRIGKPEECAGIVSFLCSE 259

Query:   236 XXXYITGETLVVAGGMPSRL 255
                YITGET+VVAGG  S L
Sbjct:   260 DASYITGETVVVAGGSLSHL 279

GO:0042574 "retinal metabolic process" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0001758 "retinal dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8SPU8 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Bos taurus (taxid:9913)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 98/260 (37%), Positives = 136/260 (52%)

Query:     1 MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
             M    MA+R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD AV  LK 
Sbjct:    20 MASCGMARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKG 79

Query:    59 RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
              G+ V G VCHV   + R+ L+   ++  G +               ++   E V DK+ 
Sbjct:    80 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKIL 139

Query:   119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
             D+NVK++ LL +   P + K  G S+V++SSIA Y P  S+  Y V              
Sbjct:   140 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLAL 199

Query:   177 EMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXX 235
             E+A  + RVNC+APG + T F+  +  +   +++I+    + R+G   +           
Sbjct:   200 ELAESNVRVNCLAPGLIRTSFSRVLWEDPARQESIKATFQIKRIGKPEECAGIVSFLCSE 259

Query:   236 XXXYITGETLVVAGGMPSRL 255
                YITGET+VVAGG  S L
Sbjct:   260 DASYITGETVVVAGGSLSHL 279

GO:0005739 "mitochondrion" evidence=ISS

GO:0005777 "peroxisome" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q9GKX2 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Oryctolagus cuniculus (taxid:9986)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 97/246 (39%), Positives = 130/246 (52%)

Query:    13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
             KVAIVTAST GIG  IA RL  +GA VV+SSRKQ+NVD AV  L+A G+ V G VCHV  
Sbjct:    15 KVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGK 74

Query:    73 GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
              + R+ L+   +   G I               ++   E V DK+ DINVK+  L+ +  
Sbjct:    75 AEDRERLVATALNLHGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAV 134

Query:   133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNCVAP 189
              P ++K  G SVV+++SIA + P S +  Y V              E+A    RVNC+AP
Sbjct:   135 VPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAP 194

Query:   190 GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLVVAG 249
             G + T F++ +  +    + I Q   + RLG   +              YITGET+VVAG
Sbjct:   195 GLIKTSFSKALWEDKAQEENIIQKLRIRRLGKPEECAGIVSFLCSEDASYITGETVVVAG 254

Query:   250 GMPSRL 255
             G PSRL
Sbjct:   255 GAPSRL 260

GO:0005739 "mitochondrion" evidence=ISS

UNIPROTKB|Q8WNV7 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Sus scrofa (taxid:9823)]

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 90/251 (35%), Positives = 134/251 (53%)

Query:     8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
             K  + KVA+VTAST GIG  IA RL  +GA VVVSSRKQ+NVD  V  L+  G+ V G V
Sbjct:    29 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 88

Query:    68 CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             CHV   + R+ L+   +   G +               I+   E V DK+  +NVK+++L
Sbjct:    89 CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 148

Query:   128 LLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRV 184
             + +   P ++K  G SV+++SS+  Y P  ++  Y V              E+AP + RV
Sbjct:   149 MTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRV 208

Query:   185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGET 244
             NC+APG + T+F++ +  +   ++ ++++  + RLG   D              YITGET
Sbjct:   209 NCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGET 268

Query:   245 LVVAGGMPSRL 255
             +VV GG  SRL
Sbjct:   269 VVVGGGTASRL 279

GO:0055114 "oxidation-reduction process" evidence=IDA

GO:0000253 "3-keto sterol reductase activity" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISS

GO:0005777 "peroxisome" evidence=IEA

GO:0042574 "retinal metabolic process" evidence=IEA

GO:0001758 "retinal dehydrogenase activity" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|708482 Dhrs4 "dehydrogenase/reductase (SDR family) member 4" [Rattus norvegicus (taxid:10116)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 93/246 (37%), Positives = 131/246 (53%)

Query:    13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
             KVA+VTAST GIG  IA RL  +GA VV+SSRKQ+NVD AV  L+  G+ V GVVCHV  
Sbjct:    34 KVALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCHVGK 93

Query:    73 GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
              + R+ L+N  ++    I               ++   E V +K+  INV +S ++++  
Sbjct:    94 AEDREKLVNMALKLHQGIDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMIKAV 153

Query:   133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAP 189
              P ++K  G SVV++SS+AG+    S+  Y V              E+AP + RVNC+AP
Sbjct:   154 VPAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAP 213

Query:   190 GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLVVAG 249
             G + THF+  +       + I++   + RLG   D              YI GET+VV G
Sbjct:   214 GLIKTHFSSVLWKEKAREEMIKETMQIRRLGKPEDCVGIVSFLCSEDASYINGETVVVGG 273

Query:   250 GMPSRL 255
             G PSRL
Sbjct:   274 GTPSRL 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000253 "3-keto sterol reductase activity" evidence=ISO

GO:0001758 "retinal dehydrogenase activity" evidence=IEA;ISO

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IEA;ISO

GO:0005102 "receptor binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;ISS

GO:0005777 "peroxisome" evidence=ISO;IDA

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006066 "alcohol metabolic process" evidence=ISO

GO:0008202 "steroid metabolic process" evidence=ISO

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=ISO

GO:0018455 "alcohol dehydrogenase [NAD(P)+

GO:0042180 "cellular ketone metabolic process" evidence=ISO

GO:0042574 "retinal metabolic process" evidence=IEA;ISO

GO:0051262 "protein tetramerization" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|D3DS54 DHRS2 "Dehydrogenase/reductase SDR family member 2" [Homo sapiens (taxid:9606)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 87/239 (36%), Positives = 129/239 (53%)

Query:    13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
             +VA+VT ST GIGF IA RL  +GA VV+SSRKQ+NVD A+ KL+  G+ V G+VCHV  
Sbjct:    37 RVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGK 96

Query:    73 GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
              + R+ L+ + +E  G +                L T E + DK+  +NVKS  LLL   
Sbjct:    97 AEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQL 156

Query:   133 APHLQ-KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPG 190
              P+++ +  +V+L+SSIA Y P  ++ +Y V              E+AP D RVNCV PG
Sbjct:   157 LPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPG 216

Query:   191 FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLVVAG 249
              + T F++    N+ + +  +++  L R+G + D              Y+ GE + VAG
Sbjct:   217 IIKTDFSKVFHGNESLWKNFKEHHQLQRIGESEDCAGIVSFLCSPDASYVNGENIAVAG 275

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O67610	FABG_AQUAE	1, ., 1, ., 1, ., 1, 0, 0	0.3346	0.9019	0.9274	yes	no
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3157	0.9372	0.9715	yes	no
Q8WNV7	DHRS4_PIG	1, ., 1, ., 1, ., 1, 8, 4	0.4621	0.9725	0.8888	yes	no
P0A0H9	FABG_STAAM	1, ., 1, ., 1, ., 1, 0, 0	0.3492	0.9411	0.9756	yes	no
Q5HPW0	FABG_STAEQ	1, ., 1, ., 1, ., 1, 0, 0	0.3703	0.9254	0.9672	yes	no
Q5HGK2	FABG_STAAC	1, ., 1, ., 1, ., 1, 0, 0	0.3492	0.9411	0.9756	yes	no
O07575	YHDF_BACSU	1, ., -, ., -, ., -	0.3046	0.9529	0.8408	yes	no
Q8CPI3	FABG_STAES	1, ., 1, ., 1, ., 1, 0, 0	0.3703	0.9254	0.9672	yes	no
Q49117	Y182_METEA	1, ., -, ., -, ., -	0.3669	0.9411	0.9677	yes	no
Q9GKX2	DHRS4_RABIT	1, ., 1, ., 1, ., 1, 8, 4	0.4959	0.9529	0.9346	yes	no
Q6GHK4	FABG_STAAR	1, ., 1, ., 1, ., 1, 0, 0	0.3492	0.9411	0.9756	yes	no
P99093	FABG_STAAN	1, ., 1, ., 1, ., 1, 0, 0	0.3492	0.9411	0.9756	yes	no
P0A0I0	FABG_STAAW	1, ., 1, ., 1, ., 1, 0, 0	0.3492	0.9411	0.9756	yes	no
Q99LB2	DHRS4_MOUSE	1, ., 1, ., 1, ., 1, 8, 4	0.4796	0.9529	0.8709	yes	no
Q5RCF8	DHRS4_PONAB	1, ., 1, ., 1, ., 1, 8, 4	0.4846	1.0	0.9172	yes	no
Q6G9Y2	FABG_STAAS	1, ., 1, ., 1, ., 1, 0, 0	0.3492	0.9411	0.9756	yes	no
P0A2C9	FABG_SALTY	1, ., 1, ., 1, ., 1, 0, 0	0.3333	0.9215	0.9631	yes	no
P50941	FABG_RICPR	1, ., 1, ., 1, ., 1, 0, 0	0.3490	0.8705	0.9211	yes	no
Q8SPU8	DHRS4_BOVIN	1, ., 1, ., 1, ., 1, 8, 4	0.4730	1.0	0.9139	yes	no
Q68VY7	FABG_RICTY	1, ., 1, ., 1, ., 1, 0, 0	0.3585	0.8862	0.9377	yes	no
Q8VID1	DHRS4_RAT	1, ., 1, ., 1, ., 1, 8, 4	0.4796	0.9529	0.8709	yes	no
P43713	FABG_HAEIN	1, ., 1, ., 1, ., 1, 0, 0	0.3469	0.9254	0.9752	yes	no
Q9BTZ2	DHRS4_HUMAN	1, ., 1, ., 1, ., 1, 8, 4	0.4884	1.0	0.9172	yes	no
P0AEK3	FABG_SHIFL	1, ., 1, ., 1, ., 1, 0, 0	0.3292	0.9215	0.9631	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.921
3rd Layer	1.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	255
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-95
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-75
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-64
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-61
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-61
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-59
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-58
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	1e-56
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	4e-55
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	4e-55
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-54
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	3e-53
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-52
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	9e-52
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-51
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-51
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	3e-48
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	7e-48
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-47
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	9e-47
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-46
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-46
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-45
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-44
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-44
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	8e-44
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	9e-44
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	4e-43
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	5e-43
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	7e-43
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-42
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	1e-42
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	1e-42
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-42
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-42
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	5e-42
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	3e-41
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	4e-41
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	5e-41
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	6e-41
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	3e-40
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	4e-40
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	5e-40
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	4e-39
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	5e-39
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-38
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	4e-38
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	4e-38
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	5e-38
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	8e-38
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	2e-37
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	2e-37
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-37
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-37
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-37
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	3e-37
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-36
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	2e-36
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	3e-36
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	3e-36
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	4e-36
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	6e-36
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	8e-36
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-35
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-35
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	5e-35
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	6e-35
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	7e-35
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	9e-35
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-34
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	3e-34
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-34
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-34
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-33
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-33
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	6e-33
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-32
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-32
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-32
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	3e-32
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-32
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	4e-32
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	7e-32
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	7e-32
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	8e-32
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	9e-32
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	9e-32
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	1e-31
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-31
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-31
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	8e-31
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	9e-31
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-30
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-30
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-30
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-30
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-30
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	6e-30
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	7e-30
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-29
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-29
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-29
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-29
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-29
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	3e-29
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	9e-29
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	1e-28
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	1e-28
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-28
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	2e-28
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	2e-28
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	3e-28
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	3e-28
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	6e-28
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	7e-28
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	7e-28
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	7e-28
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	1e-27
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-27
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-27
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-27
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	3e-27
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	5e-27
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	6e-27
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	1e-26
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	1e-26
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	1e-26
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	2e-26
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-26
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	3e-26
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	8e-26
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-25
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-25
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-25
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-25
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	4e-25
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-24
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-24
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	9e-24
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-23
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	2e-23
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	2e-23
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-23
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	3e-23
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	5e-23
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	5e-23
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	5e-23
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	7e-23
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	9e-23
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	5e-22
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	7e-22
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-21
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-21
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-21
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	3e-21
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	7e-21
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-20
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-20
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	6e-20
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-20
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-19
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	1e-19
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-19
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	2e-19
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	5e-19
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-19
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	1e-18
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-18
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-18
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	3e-18
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-18
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-18
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	4e-18
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	5e-18
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	8e-18
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-17
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-17
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	2e-17
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	2e-17
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-17
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	3e-17
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	3e-17
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-17
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	4e-17
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	4e-17
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	8e-17
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-16
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-16
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	2e-16
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-16
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	5e-16
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-15
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	2e-15
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	3e-15
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	4e-15
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	5e-15
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	5e-15
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-15
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-14
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-14
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	2e-14
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-14
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	6e-14
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	8e-14
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	1e-13
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	2e-13
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	3e-13
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	7e-13
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-12
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-12
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	1e-12
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	1e-12
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	2e-12
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	4e-12
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	4e-12
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	4e-12
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	5e-12
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	7e-12
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	7e-12
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	2e-11
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	3e-11
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	9e-11
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	9e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-10
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	3e-10
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	4e-10
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	4e-10
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	7e-10
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	9e-10
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	2e-09
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	5e-09
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	3e-08
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	4e-08
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	4e-08
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	1e-07
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	1e-07
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	3e-07
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-06
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	3e-06
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	3e-06
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	6e-06
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	8e-06
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	9e-06
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	2e-05
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-05
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-05
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-05
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	3e-05
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	4e-05
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	5e-05
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	5e-05
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	7e-05
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	1e-04
PRK07578	199	PRK07578, PRK07578, short chain dehydrogenase; Pro	3e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	4e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	5e-04
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	5e-04
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	5e-04
PRK05884	223	PRK05884, PRK05884, short chain dehydrogenase; Pro	8e-04
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	0.001
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	0.001
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	0.002
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	0.002
PRK05599	246	PRK05599, PRK05599, hypothetical protein; Provisio	0.003

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  280 bits (718), Expect = 1e-95
 Identities = 121/255 (47%), Positives = 166/255 (65%), Gaps = 3/255 (1%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           +        KVA+VTAST GIG  IA RL  +GA VVVSSRKQ+NVD AV  L+  G+ V
Sbjct: 2   VTRRDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSV 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
            G VCHV   + R+ L+   +   G +D++VSNAA NP   +IL + E V DK+ D+NVK
Sbjct: 62  TGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVK 121

Query: 124 SSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
           ++ L+ +   P ++K  G SVV++SS+A + P   +  Y V+KTALLGLTK LA E+AP 
Sbjct: 122 ATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPR 181

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
           + RVNC+APG + T F+  +  +  V +++++   + RLG   D A   +FL S+DASYI
Sbjct: 182 NIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLCSEDASYI 241

Query: 241 TGETLVVAGGMPSRL 255
           TGET+VV GG PSRL
Sbjct: 242 TGETVVVGGGTPSRL 256

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  228 bits (584), Expect = 3e-75
 Identities = 100/249 (40%), Positives = 140/249 (56%), Gaps = 6/249 (2%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R +GKVAIVT ++ GIG GIA R   EGA VVV+ R ++  +    ++ A G   I V 
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVA 59

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS+    +  +   +E+FG +D++V+NA        +L   E+  D+++ +NVKS  L
Sbjct: 60  ADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYL 119

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
             Q A P +  + G ++V ++S AG +P+  +  Y  +K A++ LTKALAAE+ PD  RV
Sbjct: 120 WTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRV 179

Query: 185 NCVAPGFVPTHFAE--YITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           N VAP  V T   E          R        L RLGT  D+A AA FLASD+AS+ITG
Sbjct: 180 NAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITG 239

Query: 243 ETLVVAGGM 251
            TLVV GG 
Sbjct: 240 VTLVVDGGR 248

Length = 251

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  200 bits (510), Expect = 2e-64
 Identities = 88/236 (37%), Positives = 135/236 (57%), Gaps = 6/236 (2%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
           A+VT ++ GIG  IA RL  EGA VV++ R ++ + E    ++A G   + V   VS+ +
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELA-AIEALGGNAVAVQADVSDEE 59

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
             + L+ + +E+FG++D++V+NA        + +  +   D++ D+N+    LL + A P
Sbjct: 60  DVEALVEEALEEFGRLDILVNNAGIARP-GPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 135 HL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
           H+  Q G  +V ISS+AG +P    A Y  +K AL GLT++LA E+AP   RVN VAPG 
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 192 VPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV 247
           V T         +   + +     L RLGT  ++A A  FLASD+ASYITG+ + V
Sbjct: 179 VDTPMLA-KLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPV 233

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  193 bits (494), Expect = 1e-61
 Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 6/247 (2%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
              QGK A+VT +++GIG  IA RL  +GA VV+    ++  +    +L+A G E   +V
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS+    + LI   +E FG +D++V+NA        + +  E   D++ D+N+  +  
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDA-LLPRMSEEDWDRVIDVNLTGTFN 119

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           +++ A P +   +   +V ISS++G         Y   K  ++G TKALA E+A     V
Sbjct: 120 VVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITV 179

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           N VAPGF+ T   E     + V+  I +   L RLG   ++A A AFLASD ASYITG+ 
Sbjct: 180 NAVAPGFIDTDMTE--GLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQV 237

Query: 245 LVVAGGM 251
           + V GGM
Sbjct: 238 IPVNGGM 244

Length = 246

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  191 bits (488), Expect = 9e-61
 Identities = 93/248 (37%), Positives = 141/248 (56%), Gaps = 7/248 (2%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGV 66
            +  GKVAIVT ++ GIG  IAE L  EGA VV++    +   + +++ +K  G + I V
Sbjct: 1   MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              VS+ +  +NL+ Q +EKFGKID++V+NA  + +   +    +   D++ D+N+   +
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVNLTGVM 119

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
           LL + A P++  +K   +V ISSI G    S   +Y  +K A+   TKALA E+AP   R
Sbjct: 120 LLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIR 179

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           VN VAPG + T      +  D  ++ + +   L RLG   ++A    FLASDDASYITG+
Sbjct: 180 VNAVAPGAIDTEMWSSFSEED--KEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQ 237

Query: 244 TLVVAGGM 251
            + V GG 
Sbjct: 238 IITVDGGW 245

Length = 247

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  188 bits (480), Expect = 1e-59
 Identities = 99/250 (39%), Positives = 142/250 (56%), Gaps = 8/250 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVV-SSRKQKNVDEAVVKL--KARGIEVIG 65
              GKVA+VT ++ GIG  IA  L  EGA VVV + R ++   EA+     +A G     
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 66  VVCHVSNG-QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
           V   VS+  +  + L+    E+FG+ID++V+NA        + +  E   D++ D+N+  
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLG 121

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
           + LL + A P ++K   +V ISS+AG       A Y  +K AL+GLTKALA E+AP   R
Sbjct: 122 AFLLTRAALPLMKKQ-RIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIR 180

Query: 184 VNCVAPGFVPTHFAEYITSNDG-VRQTIEQNTLLNRLGTTRDMAAAAAFLASDD-ASYIT 241
           VN VAPG++ T     + S +    + +     L RLGT  ++AAA AFLASD+ ASYIT
Sbjct: 181 VNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAASYIT 240

Query: 242 GETLVVAGGM 251
           G+TL V GG+
Sbjct: 241 GQTLPVDGGL 250

Length = 251

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  184 bits (470), Expect = 5e-58
 Identities = 88/248 (35%), Positives = 142/248 (57%), Gaps = 7/248 (2%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGV 66
              +GKVA+VT +++GIG  IAERL  +GA+VV++    +   EA+V  + A G + + V
Sbjct: 1   MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAV 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              VS+ +  +  +++   +FG +D++V+NA      + +++ KE   D++ D N+    
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGIT-RDNLLMRMKEEDWDRVIDTNLTGVF 119

Query: 127 LLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            L +  A  + K  S  ++ ISS+ G       A Y  +K  ++G TK+LA E+A     
Sbjct: 120 NLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGIT 179

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           VN VAPGF+ T   + +   + V++ I     L RLG   ++A+A AFLASD+A+YITG+
Sbjct: 180 VNAVAPGFIETDMTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQ 237

Query: 244 TLVVAGGM 251
           TL V GGM
Sbjct: 238 TLHVNGGM 245

Length = 248

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  180 bits (460), Expect = 1e-56
 Identities = 88/243 (36%), Positives = 130/243 (53%), Gaps = 3/243 (1%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GK+A+VT +++GIG  IA+ L  +GA V+VSSRK          + A G +   + CH+ 
Sbjct: 8   GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIG 67

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
             +Q   L     E+ G++D++V+NAAANP    IL T      K  D+N++    +  +
Sbjct: 68  EMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVE 127

Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
           A   +  Q G S+V ++S+ G  P     +Y +TK A++ +TKA A E AP   RVN + 
Sbjct: 128 AGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALL 187

Query: 189 PGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA 248
           PG   T FA  +  ND + +    +  L R     +MA A  +LASD +SY TGE L V 
Sbjct: 188 PGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVD 247

Query: 249 GGM 251
           GG 
Sbjct: 248 GGY 250

Length = 252

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  177 bits (451), Expect = 4e-55
 Identities = 89/252 (35%), Positives = 138/252 (54%), Gaps = 17/252 (6%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
            GK A+VT  ++G+G  IAE LG  GA VV+S+RK + ++EA   L+A GI+ + +   V
Sbjct: 11  SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADV 70

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAAN---PSVDSILQTKESVLDKLWDINVKSSIL 127
           ++    + L  +T+E+FG +D++V+NA A    P+ D  ++      DK+ ++NV+   L
Sbjct: 71  ADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEA----WDKVMNLNVRGLFL 126

Query: 128 LLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAM----YGVTKTALLGLTKALAAEMAP 180
           L Q  A      +    ++ ++S+AG        M    Y  +K A++  T+ALAAE  P
Sbjct: 127 LSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGP 186

Query: 181 -DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
              RVN +APGF PT          G  + +  +T L RLG   D+  AA  LASD + +
Sbjct: 187 HGIRVNAIAPGFFPTKMTRGTLERLG--EDLLAHTPLGRLGDDEDLKGAALLLASDASKH 244

Query: 240 ITGETLVVAGGM 251
           ITG+ L V GG+
Sbjct: 245 ITGQILAVDGGV 256

Length = 259

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  176 bits (450), Expect = 4e-55
 Identities = 86/243 (35%), Positives = 137/243 (56%), Gaps = 8/243 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT +++GIG  IA RL  EGA V V+ R ++   E V ++KA G     +   VS+
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDS-ILQTKESVLDKLWDINVKSSILLLQD 131
            +  + L+ +   +FG +D++V+NA    + D+ +++  E   D + ++N+     + Q 
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGI--TRDNLLMRMSEEDWDAVINVNLTGVFNVTQA 118

Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
               +  ++   ++ ISS+ G       A Y  +K  ++G TK+LA E+A     VN VA
Sbjct: 119 VIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNAVA 178

Query: 189 PGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA 248
           PGF+ T   + +   + V++ I +   L RLGT  ++A A AFLASDDASYITG+ L V 
Sbjct: 179 PGFIDTDMTDAL--PEKVKEKILKQIPLGRLGTPEEVANAVAFLASDDASYITGQVLHVN 236

Query: 249 GGM 251
           GGM
Sbjct: 237 GGM 239

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  175 bits (447), Expect = 1e-54
 Identities = 89/242 (36%), Positives = 143/242 (59%), Gaps = 9/242 (3%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNG 73
           A+VT +++GIG  IA +L  EGA V+++ R   +  +E V +LKA G++ +GVVC VS+ 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 74  QQRKNLINQTIEKFGKIDVVVSNAAANPSVDS-ILQTKESVLDKLWDINVKSSILLLQDA 132
           +  K ++ +  E+ G ID++V+NA    + D+ +++ KE   D + D N+     L Q  
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGI--TRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAV 118

Query: 133 APHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
              +  Q+   ++ ISS+ G    +  A Y  +K  ++G TK+LA E+A  +  VN VAP
Sbjct: 119 LRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAP 178

Query: 190 GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG 249
           GF+ T   + +  ++ V++ I     L R GT  ++A A AFLASD+ASYITG+ + V G
Sbjct: 179 GFIDTDMTDKL--SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDG 236

Query: 250 GM 251
           GM
Sbjct: 237 GM 238

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  172 bits (438), Expect = 3e-53
 Identities = 81/252 (32%), Positives = 127/252 (50%), Gaps = 15/252 (5%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVC 68
            +GKVA +T    GIG  IA+     GASV ++ RK + ++ A  ++  A G     + C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN---PSVDSILQTKESVLDKLWDINVKSS 125
            V + +  +  +++T+++FGKID++++NAA N   P+        ++V+    DI++  +
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVI----DIDLNGT 116

Query: 126 ILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
               +     L   + G S++ IS+   Y            K  +  LT++LA E  P  
Sbjct: 117 FNTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGPYG 176

Query: 182 TRVNCVAPGFVPT--HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
            RVN +APG +PT         S    ++ IE+   L RLGT  ++A  A FL SD ASY
Sbjct: 177 IRVNAIAPGPIPTTEGMERLAPSGKSEKKMIERVP-LGRLGTPEEIANLALFLLSDAASY 235

Query: 240 ITGETLVVAGGM 251
           I G TLVV GG 
Sbjct: 236 INGTTLVVDGGQ 247

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  170 bits (432), Expect = 2e-52
 Identities = 79/252 (31%), Positives = 138/252 (54%), Gaps = 13/252 (5%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKVA+VTA++ GIG  IA  L  EGA V + +R ++N++ A  +L+A G  V+ VV  ++
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           + +    L+ +  + FG++D++V+N A  P      +  +    + +D+ + S I +++ 
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNN-AGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119

Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
             P +  +    +V ISS+   +P+ ++ +  V +  L+GL K L+ E+APD   VN V 
Sbjct: 120 VLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVL 179

Query: 189 PGFVPT-----HFAEYI----TSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
           PG++ T                S +   + +     L R+G   ++AA  AFLAS+ ASY
Sbjct: 180 PGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAFLASEKASY 239

Query: 240 ITGETLVVAGGM 251
           ITG+ ++V GG+
Sbjct: 240 ITGQAILVDGGL 251

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  169 bits (429), Expect = 9e-52
 Identities = 87/249 (34%), Positives = 132/249 (53%), Gaps = 10/249 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R   +VA+VT + +G+G  IA      GA V++++R +  +DE   +++A G     V  
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA 66

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSN---AAANPSVDSILQTKESVLDKLWDINVKSS 125
            +++ +    L  Q +E FG++D+VV+N      NP    +L T    L   +  NV ++
Sbjct: 67  DLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNP----LLSTSTKDLADAFTFNVATA 122

Query: 126 ILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
             L   A P + +   G SV+ ISS  G       A YG  K AL   T+  A ++ P  
Sbjct: 123 HALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPRI 182

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           RVN +APG + T   E + +ND +R  +E+ T L RLG   D+AAAA +LAS   SY+TG
Sbjct: 183 RVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTG 242

Query: 243 ETLVVAGGM 251
           +TL V GG+
Sbjct: 243 KTLEVDGGL 251

Length = 263

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  168 bits (427), Expect = 1e-51
 Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 4/244 (1%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           +GKVA+VT +++GIGFGIA  L   GA++V++SR ++  +EA   ++  G+E     C V
Sbjct: 4   KGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCDV 63

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           S+ +  K  +    E FGKID++V+NA       +  +  E+    + D+N+     + Q
Sbjct: 64  SDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAE-EFPEAEWRDVIDVNLNGVFFVSQ 122

Query: 131 DAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
             A H+  Q    ++ I S+        +  Y  +K  + GLTKALA E A    +VN +
Sbjct: 123 AVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVNAI 182

Query: 188 APGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV 247
           APG+  T   E + ++      I +     R G   D+  AA FLASD + Y+ G+ + V
Sbjct: 183 APGYFATEMTEAVVADPEFNDDILKRIPAGRWGQPEDLVGAAVFLASDASDYVNGQIIFV 242

Query: 248 AGGM 251
            GG 
Sbjct: 243 DGGW 246

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  168 bits (427), Expect = 2e-51
 Identities = 92/257 (35%), Positives = 129/257 (50%), Gaps = 24/257 (9%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           +  +G+VA+VT + +GIG  IA RL  +GA V+V      +       ++A G +     
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQ 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW----DINVK 123
             V +    K  +   +E FG++D++V+NA   P     L     + D+ W    D+N+ 
Sbjct: 62  VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFP-----LTPFAEMDDEQWERVIDVNLT 116

Query: 124 SSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSM---AMYGVTKTALLGLTKALAAEM 178
            + LL Q A P L +  G  +VL SS+AG  P+      A Y  +K  L+G T+ALA E+
Sbjct: 117 GTFLLTQAALPALIRAGGGRIVLTSSVAG--PRVGYPGLAHYAASKAGLVGFTRALALEL 174

Query: 179 APDT-RVNCVAPGFVPTHFAEYITSNDG---VRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
           A     VN V PG V T  A     N G     + I     L RLG   D+AAA  FLAS
Sbjct: 175 AARNITVNSVHPGGVDTPMAG----NLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLAS 230

Query: 235 DDASYITGETLVVAGGM 251
           D+A YITG+TL V GG 
Sbjct: 231 DEARYITGQTLPVDGGA 247

Length = 251

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  159 bits (404), Expect = 3e-48
 Identities = 90/247 (36%), Positives = 134/247 (54%), Gaps = 5/247 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
             +GK A+VT  T+GIG+ I E L   GA V   +R QK +DE + + + +G +V G VC
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVC 62

Query: 69  HVSNGQQRKNLINQTIEKF-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
            VS+  +R+ L++     F GK++++V+NA  N   ++   T+E     +   N +++  
Sbjct: 63  DVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEED-YSLIMSTNFEAAYH 121

Query: 128 LLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           L + A P L+     ++V ISS+AG     S A YG TK AL  LT++LA E A D  RV
Sbjct: 122 LSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIRV 181

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           N VAP  + T   E +         + + T L R G   ++AA  AFL    ASYITG+ 
Sbjct: 182 NAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPEEVAALVAFLCMPAASYITGQI 241

Query: 245 LVVAGGM 251
           + V GG+
Sbjct: 242 IAVDGGL 248

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  158 bits (401), Expect = 7e-48
 Identities = 81/242 (33%), Positives = 127/242 (52%), Gaps = 4/242 (1%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCH 69
            GKVA+VT +++GIG  IA+RL  +GASVVV+ +  +   +E V +++A G + I V   
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQAD 61

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           VS+  Q   L +   + FG +D++V+NA        I +T E   D+++ +N K +  +L
Sbjct: 62  VSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKP-IAETSEEEFDRMFTVNTKGAFFVL 120

Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           Q+AA  L+ G  ++ ISS        +   Y  +K A+   T+ LA E+      VN VA
Sbjct: 121 QEAAKRLRDGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVA 180

Query: 189 PGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA 248
           PG V T    Y    +   +   + + L RLG   D+A   AFLAS D  ++ G+ +   
Sbjct: 181 PGPVDTDMF-YAGKTEEAVEGYAKMSPLGRLGEPEDIAPVVAFLASPDGRWVNGQVIRAN 239

Query: 249 GG 250
           GG
Sbjct: 240 GG 241

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  157 bits (400), Expect = 1e-47
 Identities = 88/245 (35%), Positives = 131/245 (53%), Gaps = 6/245 (2%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVCHV 70
           GKVA+VT ++ GIG  IA RL   GA+VVV+ R +++  E VV+ +KA G + I V   V
Sbjct: 3   GKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADV 62

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           S  +    L    I++FG +D++V+NA       S   T E   +K+ D+N+    L  +
Sbjct: 63  SKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLED-WNKVIDVNLTGQFLCAR 121

Query: 131 DAAPHLQKGSS---VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
           +A    +K      ++ +SS+    P      Y  +K  +  +TK LA E AP   RVN 
Sbjct: 122 EAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIRVNA 181

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV 246
           +APG + T        +   R  +     + R+G   ++AAAAA+LASD+ASY+TG TL 
Sbjct: 182 IAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLASDEASYVTGTTLF 241

Query: 247 VAGGM 251
           V GGM
Sbjct: 242 VDGGM 246

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  155 bits (395), Expect = 9e-47
 Identities = 89/254 (35%), Positives = 134/254 (52%), Gaps = 15/254 (5%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHV 70
            KVAI+T + QGIG  IAERL  +G ++V++    ++     + ++   G   + V   V
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++    + LI+Q +EKFG  DV+V+NA   P +  +L   E  L K++ +NV   +  +Q
Sbjct: 62  TDKDDVEALIDQAVEKFGSFDVMVNNAGIAP-ITPLLTITEEDLKKVYAVNVFGVLFGIQ 120

Query: 131 DAAPHLQK-GSSVVLI--SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
            AA   +K G    +I  SSIAG Q   ++  Y  +K A+ GLT+  A E+AP    VN 
Sbjct: 121 AAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNA 180

Query: 187 VAPGFVPTHFAEYIT--------SNDGVR-QTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
            APG V T   +YI           +G        +  L RL    D+A   +FLAS+D+
Sbjct: 181 YAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVSFLASEDS 240

Query: 238 SYITGETLVVAGGM 251
            YITG+T++V GGM
Sbjct: 241 DYITGQTILVDGGM 254

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  154 bits (391), Expect = 3e-46
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 14/251 (5%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             G+V +VT  T+GIG GIA      GA+VVV  R+     +       R  E       
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDG------RPAEFHA--AD 55

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V +  Q   L++  +E+ G++DV+V+NA  +P   +  +      +K+ ++N+ + +L+ 
Sbjct: 56  VRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALA-AEASPRFHEKIVELNLLAPLLVA 114

Query: 130 QDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
           Q A   +Q+   G S+V I S++G +P    A YG  K  LL LT++LA E AP  RVN 
Sbjct: 115 QAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNA 174

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV 246
           V  G V T  +E    +      +     L RL T  D+A A  FLASD ASY++G  L 
Sbjct: 175 VVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANLE 234

Query: 247 VAGG--MPSRL 255
           V GG   P+ L
Sbjct: 235 VHGGGERPAFL 245

Length = 252

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  154 bits (391), Expect = 4e-46
 Identities = 88/255 (34%), Positives = 127/255 (49%), Gaps = 23/255 (9%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVV 67
              G+VA+VT + +G+G  IA RL   GA VVV  R  +   +E V  ++A G     V 
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVKS 124
             V++    +  +   +E+FG+ID++V+NA      P  D      + V+D    +N+  
Sbjct: 63  ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVID----VNLSG 118

Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
              LL+   P +  Q+G  +V ISS+AG       + Y   K  L+GLTKALA E+A   
Sbjct: 119 VFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYG 178

Query: 182 TRVNCVAPGFVPT-----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
             VN VAPG + T        E        R+  +  T L R GT  D+A A AFL SD 
Sbjct: 179 ITVNMVAPGDIDTDMKEATIEE-------AREAKDAETPLGRSGTPEDIARAVAFLCSDA 231

Query: 237 ASYITGETLVVAGGM 251
           + YITG+ + V GG+
Sbjct: 232 SDYITGQVIEVTGGV 246

Length = 249

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  152 bits (387), Expect = 1e-45
 Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 5/252 (1%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           MA    GK A+VT + +G+G   AE L   GA+V  +        E    L+A G     
Sbjct: 1   MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHA 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   +++    +   +      G +D +V+NA    S  S  +      D + ++NV+ +
Sbjct: 61  IAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNS-KSATELDIDTWDAVMNVNVRGT 119

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
            L+L+ A PHL       +V ++S         +  Y  +K A++G+T++LA E+     
Sbjct: 120 FLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGI 179

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
            VN +APG   T    Y+ +++     ++    L RL    D+A A  FL SD A ++TG
Sbjct: 180 TVNAIAPGLTATEATAYVPADERHAYYLKGRA-LERLQVPDDVAGAVLFLLSDAARFVTG 238

Query: 243 ETLVVAGGMPSR 254
           + L V GG    
Sbjct: 239 QLLPVNGGFVMN 250

Length = 250

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  150 bits (380), Expect = 1e-44
 Identities = 84/246 (34%), Positives = 140/246 (56%), Gaps = 12/246 (4%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCH 69
           + KV +VT S +GIG  IA RL  EG+ VVV+++K+   ++E +  +K  G E IGV+  
Sbjct: 5   KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLAD 64

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVKSSI 126
           VS  +  + L   TI+++G  D++V+NA     +P     L   + ++DK    + KS I
Sbjct: 65  VSTREGCETLAKATIDRYGVADILVNNAGLGLFSP----FLNVDDKLIDKHISTDFKSVI 120

Query: 127 LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
              Q+ A  +++G ++V I+S+AG +P   +++YG  K A++ LTK LA E+AP  RVN 
Sbjct: 121 YCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAPKIRVNA 180

Query: 187 VAPGFVPTHFAEYITSNDGVRQT--IEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           +APGFV T   E +    G+ +    E+ TL+ ++    ++A   A +   ++  ITG+ 
Sbjct: 181 IAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIES--ITGQV 238

Query: 245 LVVAGG 250
            V+  G
Sbjct: 239 FVLDSG 244

Length = 252

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  149 bits (377), Expect = 3e-44
 Identities = 80/250 (32%), Positives = 132/250 (52%), Gaps = 10/250 (4%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIGV 66
             GKVAI+T S+ GIG G A      GA + ++ R  + ++E        G+   +++ V
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
           V  ++  + +  +I+ T+ KFG++D++V+NA    +            DK+ ++N+++ I
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGI-LAKGGGEDQDIEEYDKVMNLNLRAVI 119

Query: 127 LLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
            L + A PHL K    +V +SS+AG +    +  Y ++K AL   T+  A E+AP   RV
Sbjct: 120 YLTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVRV 179

Query: 185 NCVAPGFVPTHFAEYITSND----GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
           N V+PG + T F   +   +          ++   L R GT  ++A A AFLASD +S+I
Sbjct: 180 NSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLASDASSFI 239

Query: 241 TGETLVVAGG 250
           TG+ L V GG
Sbjct: 240 TGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  148 bits (375), Expect = 8e-44
 Identities = 79/248 (31%), Positives = 133/248 (53%), Gaps = 6/248 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA--RGIEVIGV 66
           R  G+ A++T +++GIG  IA      GA V++ +R    + +A  +L       EV G+
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              VS+ + R+ +++   + +  + ++V+NA  N    +I  T++     +++ N+ S+ 
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDE-WRGIFETNLFSAF 124

Query: 127 LLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
            L + A P L+    S++V I S++G     S A YG+TK ALL +T+ LA E A D  R
Sbjct: 125 ELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIR 184

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           VN VAP ++ T       S+    + + + T + R+G   ++AAA AFL    ASYITG+
Sbjct: 185 VNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQ 244

Query: 244 TLVVAGGM 251
            + V GG 
Sbjct: 245 CIAVDGGF 252

Length = 257

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  147 bits (374), Expect = 9e-44
 Identities = 90/257 (35%), Positives = 133/257 (51%), Gaps = 24/257 (9%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT   QGIG GIAERL  +G +V V+   ++   E   ++   G + +     VS+
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
             Q  + I+Q  EKFG  DV+V+NA   P +  IL+  E  L K++++NVK  +  +Q A
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAA 119

Query: 133 APHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
           A   +K   G  ++  +SIAG++    ++ Y  TK A+ GLT+  A E+AP    VN   
Sbjct: 120 ARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYC 179

Query: 189 PGFVPTHFAEYITSNDGVRQTIEQNTL--------------LNRLGTTRDMAAAAAFLAS 234
           PG V T   E I       +T E                  L R     D+A   +FLAS
Sbjct: 180 PGIVKTPMWEEID-----EETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLAS 234

Query: 235 DDASYITGETLVVAGGM 251
           +D+ YITG++++V GGM
Sbjct: 235 EDSDYITGQSILVDGGM 251

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  146 bits (370), Expect = 4e-43
 Identities = 77/249 (30%), Positives = 127/249 (51%), Gaps = 11/249 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVV 67
             +GKVAIVT  ++GIG  IA  L   GA V +        +E   +L K  G++     
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           C VS+ +  +    Q  + FGKID++++NA       ++  T E   +K+ D+N+     
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQW-NKVIDVNLNGVFN 123

Query: 128 LLQDAAPHLQKG--SSVVLISSIAGY---QPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
             Q AA   +K    S+++ +S++G    +PQ   A Y  +K A++ L K+LA E A   
Sbjct: 124 CAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQ-AAYNASKAAVIHLAKSLAVEWAKYF 182

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            RVN ++PG++ T   +++     +R+  E    L R+    ++  A  +LASD +SY T
Sbjct: 183 IRVNSISPGYIDTDLTDFVDKE--LRKKWESYIPLKRIALPEELVGAYLYLASDASSYTT 240

Query: 242 GETLVVAGG 250
           G  L++ GG
Sbjct: 241 GSDLIIDGG 249

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  146 bits (369), Expect = 5e-43
 Identities = 78/248 (31%), Positives = 126/248 (50%), Gaps = 12/248 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GK AI+T +  GIG  IA      GASVVVS       +  V +++  G +     C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN--PSVDSILQTKESVLDKLWDINVKSSI 126
            +++ Q+   L +  + K GK+D++V+NA        D  +        + +++NV S  
Sbjct: 68  DITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMAD----FRRAYELNVFSFF 123

Query: 127 LLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            L Q  AP ++K  G  ++ I+S+A      +M  Y  +K A   L + +A ++   + R
Sbjct: 124 HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIR 183

Query: 184 VNCVAPGFVPTH-FAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           VN +APG + T      IT    + Q + Q+T + RLG  +D+A AA FL S  AS+++G
Sbjct: 184 VNGIAPGAILTDALKSVITPE--IEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSG 241

Query: 243 ETLVVAGG 250
           + L V+GG
Sbjct: 242 QILTVSGG 249

Length = 255

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  145 bits (369), Expect = 7e-43
 Identities = 79/252 (31%), Positives = 132/252 (52%), Gaps = 11/252 (4%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKV +V+    G+G  +A R    GA VV+++R  + +DE   ++   G   + V   
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +++  Q  NL+   +E+FG++D +V+NA   PS+  +     +    + ++NV  ++ L 
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLT 122

Query: 130 QDAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
           Q   P L + G S+V+I+S+     Q     Y + K ALL  +++LA E+ P   RVN V
Sbjct: 123 QAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSV 182

Query: 188 APGF-----VPTHF----AEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
           APG+     +  +F     +Y  + + +      N+ L RL T  ++A+A  FLASD A 
Sbjct: 183 APGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLAR 242

Query: 239 YITGETLVVAGG 250
            ITG+TL V  G
Sbjct: 243 AITGQTLDVNCG 254

Length = 258

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  145 bits (369), Expect = 1e-42
 Identities = 70/263 (26%), Positives = 110/263 (41%), Gaps = 19/263 (7%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
            + + K   G   +VT    GIG  IAE     GA V V    +  +     +L   G +
Sbjct: 2   AIDLLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP--GAK 59

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V   V  V++  Q + + +  +E+FG +DV+V+NA        I +      ++   +N+
Sbjct: 60  VTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNL 119

Query: 123 KSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAM---YGVTKTALLGLTKALAAE 177
                  + A P L+      V++  S      +        Y  +K A++GL K+LA E
Sbjct: 120 NGQFYFARAAVPLLKASGHGGVIIALSSVA--GRLGYPGRTPYAASKWAVVGLVKSLAIE 177

Query: 178 MAP-DTRVNCVAPGFVPTHFAEYITSN---------DGVRQTIEQNTLLNRLGTTRDMAA 227
           + P   RVN + PG V       +            D + Q   +   L R+    D+AA
Sbjct: 178 LGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAA 237

Query: 228 AAAFLASDDASYITGETLVVAGG 250
            A FLAS  A YITG+ + V G 
Sbjct: 238 TALFLASPAARYITGQAISVDGN 260

Length = 264

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  145 bits (367), Expect = 1e-42
 Identities = 82/246 (33%), Positives = 137/246 (55%), Gaps = 5/246 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVV 67
            F GKVA+VT S++GIG  IA RL  EG  + V+ +R +K  +E   +++A G + + V 
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVK 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
            +V + ++ K +  Q  E+FG++DV V+NAA+   +   ++ +ES  D   +IN K+ + 
Sbjct: 61  ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASG-VLRPAMELEESHWDWTMNINAKALLF 119

Query: 128 LLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
             Q+AA  ++K  G  ++ +SS+   +   +    GV+K AL  LT+ LA E+AP    V
Sbjct: 120 CAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAV 179

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           N V+ G V T   ++  + + + +     T   R+    D+A A  FL S +A  I G+T
Sbjct: 180 NAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQT 239

Query: 245 LVVAGG 250
           ++V GG
Sbjct: 240 IIVDGG 245

Length = 250

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  145 bits (367), Expect = 1e-42
 Identities = 81/249 (32%), Positives = 123/249 (49%), Gaps = 4/249 (1%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M+  F GKVA+VT    GIG   A     EGA VVV+ R     +E V  ++  G E + 
Sbjct: 1   MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALF 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V C V+   + K L+ QTI  +G++D   +NA        + +  E+  D +  +NVK  
Sbjct: 61  VACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGV 120

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA-PDT 182
            L ++   P +  Q G ++V  +S+AG      M++Y  +K A++GLTK+ A E A    
Sbjct: 121 WLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGI 180

Query: 183 RVNCVAPGFVPTHFAEYITSNDG-VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
           RVN V P  + T         D    +       + R+G   ++A+A  +L SD AS+ T
Sbjct: 181 RVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTT 240

Query: 242 GETLVVAGG 250
           G  L+V GG
Sbjct: 241 GHALMVDGG 249

Length = 253

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  145 bits (368), Expect = 1e-42
 Identities = 77/252 (30%), Positives = 131/252 (51%), Gaps = 14/252 (5%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVI 64
           + + +GK A++T    GIG  +A     EGA V ++   ++  D    K  ++  G + +
Sbjct: 21  SGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCL 80

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
            +   + +    ++L+ + +++FGK+D++V+NAA     +SI       L+K +  N+ S
Sbjct: 81  LIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFS 140

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
              L + A PHL+KGSS++  +S+  Y+    +  Y  TK A++  T+ L+ ++A    R
Sbjct: 141 MFYLTKAALPHLKKGSSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEKGIR 200

Query: 184 VNCVAPG-----FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
           VN VAPG      +P+ F E   S  G          + R G   ++A A  FLAS D+S
Sbjct: 201 VNAVAPGPIWTPLIPSSFPEEKVSEFG------SQVPMGRAGQPAEVAPAYVFLASQDSS 254

Query: 239 YITGETLVVAGG 250
           Y+TG+ L V GG
Sbjct: 255 YVTGQVLHVNGG 266

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  144 bits (365), Expect = 3e-42
 Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 14/255 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
             +GKVA+VT +  GIG  IA  L  EGA VV++    +    A   L+  G + IGV  
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V++ +     I+  +E FG +D++V+NA     V  I         K+  I +  + L 
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQ-HVAPIEDFPTEKWKKMIAIMLDGAFLT 119

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            + A P +  Q G  ++ ++S+ G    +  A Y   K  L+GLTK +A E A     VN
Sbjct: 120 TKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVN 179

Query: 186 CVAPGFVPTHFAEY----------ITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
            + PG+V T               I+  + +   +       R  T  ++A  A FLAS 
Sbjct: 180 AICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASF 239

Query: 236 DASYITGETLVVAGG 250
            A  +TG+  VV GG
Sbjct: 240 AAKGVTGQAWVVDGG 254

Length = 258

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  143 bits (362), Expect = 5e-42
 Identities = 89/249 (35%), Positives = 130/249 (52%), Gaps = 11/249 (4%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVAIVT +  GIG   A RL  EGA VVV+          V ++       + +   
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQI---AGGALALRVD 57

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++ QQ   L  + +E+FG +D++V+NA A     +I+ T  +V D+   IN++ + L  
Sbjct: 58  VTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCC 117

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM-APDTRVNC 186
           + AAP +  + G S+V +SSIAG         YG +K A+  LT+ LAAE+     R N 
Sbjct: 118 RHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNA 177

Query: 187 VAPGFVPT-----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
           +APG + T       A +  +       +  + L  RLG   D+AAA  FL SDDAS+IT
Sbjct: 178 LAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDASFIT 237

Query: 242 GETLVVAGG 250
           G+ L V GG
Sbjct: 238 GQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  140 bits (356), Expect = 3e-41
 Identities = 83/242 (34%), Positives = 126/242 (52%), Gaps = 9/242 (3%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA---VVKLKARGIEVIGVVCHVS 71
           A+VT  ++GIG  IA RL   GA VV++ RK  + D A     +++  G + + V   VS
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRK--SKDAAAEVAAEIEELGGKAVVVRADVS 58

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
             Q  + +     E+FG++DV+VSNAAA      + +   +  D   + N+K+ +   Q 
Sbjct: 59  QPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRP-LSELTPAHWDAKMNTNLKALVHCAQQ 117

Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
           AA  +  + G  +V ISS+   +   +    G  K AL  L + LA E+ P   RVN V+
Sbjct: 118 AAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVS 177

Query: 189 PGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA 248
           PG + T    +  + + + +    NT   R+GT +D+A A  FL SD A  ITG+TLVV 
Sbjct: 178 PGVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDAARMITGQTLVVD 237

Query: 249 GG 250
           GG
Sbjct: 238 GG 239

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  141 bits (357), Expect = 4e-41
 Identities = 80/245 (32%), Positives = 120/245 (48%), Gaps = 10/245 (4%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKA-RGIEVIGVVC 68
             KVA++T   + IG  IA  L   G  V +   +     D    +L A R      +  
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            + +      L+   +  FG++D +V+NA++      +    E+  D L+  N+K+   L
Sbjct: 65  DLLDPDALPELVAACVAAFGRLDALVNNASSFYPTP-LGSITEAQWDDLFASNLKAPFFL 123

Query: 129 LQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
            Q AAP L+K   ++V I+ I   +P     +Y   K AL  LT++LA E+AP+ RVN V
Sbjct: 124 SQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAV 183

Query: 188 APGFV--PTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
           APG +  P     +   ++  RQ I   T L R+GT  D+A A  FL   DAS+ITG+ L
Sbjct: 184 APGAILWPEDGNSF---DEEARQAILARTPLKRIGTPEDIAEAVRFLL-ADASFITGQIL 239

Query: 246 VVAGG 250
            V GG
Sbjct: 240 AVDGG 244

Length = 249

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  148 bits (377), Expect = 5e-41
 Identities = 82/266 (30%), Positives = 120/266 (45%), Gaps = 18/266 (6%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           +M   K   GKVA+VT +  GIG   A+RL  EGA VV++   ++  + A  +L      
Sbjct: 413 RMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD-R 471

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            +GV C V++    +    +    FG +D+VVSNA    S   I +T +    + +D+N 
Sbjct: 472 ALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGP-IEETSDEDWRRSFDVNA 530

Query: 123 KSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
               L+ ++A   +     G S+V I+S     P  +   YG  K A L L + LA E+ 
Sbjct: 531 TGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELG 590

Query: 180 PD-TRVNCVAP------------GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMA 226
           PD  RVN V P             ++    A Y  S + + +      LL R  T  D+A
Sbjct: 591 PDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVA 650

Query: 227 AAAAFLASDDASYITGETLVVAGGMP 252
            A  FLAS   S  TG  + V GG  
Sbjct: 651 EAVVFLASGLLSKTTGAIITVDGGNA 676

Length = 681

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  141 bits (356), Expect = 6e-41
 Identities = 87/255 (34%), Positives = 131/255 (51%), Gaps = 18/255 (7%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            KVA+VT + QGIGF IA+RL  +G  V +    ++    A  KL   G + I V   VS
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVS 61

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPS--VDSILQTKESVLDKLWDINVKSSILLL 129
           +  Q    + Q ++ FG ++VVV+NA   P+  +++I    E   DK+++INV   I  +
Sbjct: 62  DRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETI---TEEQFDKVYNINVGGVIWGI 118

Query: 130 QDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           Q A    +K   G  ++  +S AG      +A+Y  TK A+ GLT+  A ++A +   VN
Sbjct: 119 QAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVN 178

Query: 186 CVAPGFVPT----HFAEYITSNDGV-----RQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
             APG V T      A  +  N G       +   ++  L RL    D+A   +FLA  D
Sbjct: 179 AYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPD 238

Query: 237 ASYITGETLVVAGGM 251
           + YITG+T++V GGM
Sbjct: 239 SDYITGQTIIVDGGM 253

Length = 256

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  138 bits (350), Expect = 3e-40
 Identities = 83/248 (33%), Positives = 129/248 (52%), Gaps = 10/248 (4%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
            GK+ +VT  ++GIG  IA+     GA V++S+RK +   +A  +L A G E I +   +
Sbjct: 5   AGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-ECIAIPADL 63

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           S+ +  + L+ +  E+  ++DV+V+NA A      +    ES  DK+ DINVKS   L Q
Sbjct: 64  SSEEGIEALVARVAERSDRLDVLVNNAGATWGA-PLEAFPESGWDKVMDINVKSVFFLTQ 122

Query: 131 DAAPHLQKGSS------VVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
              P L+  ++      V+ I SIAG          YG +K A+  LT+ LA E+A +  
Sbjct: 123 ALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAGEHI 182

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
            VN +APG  P+    ++ ++    +  E++  L R G   DMA  A  LAS   +Y+TG
Sbjct: 183 TVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPLGRWGRPEDMAGLAIMLASRAGAYLTG 242

Query: 243 ETLVVAGG 250
             + V GG
Sbjct: 243 AVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  138 bits (349), Expect = 4e-40
 Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 10/241 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVS 71
            VA+VT + + IG  IAE L  EG  VVV   + +        +L A     + V   +S
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +     +L+      FG+ DV+V+NA+A      + Q  E    +L+ IN+K+  LL+Q 
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASAFY-PTPLGQGSEDAWAELFGINLKAPYLLIQA 119

Query: 132 AAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP 189
            A  L      S++ I      +P +    Y ++K AL GLT++ A E+AP+ RVN +AP
Sbjct: 120 FARRLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPNIRVNGIAP 179

Query: 190 GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG 249
           G +     E    +   R+   +   L R  +  ++A A  FL   +  YITG+ + V G
Sbjct: 180 GLIL--LPE--DMDAEYRENALRKVPLKRRPSAEEIADAVIFLLDSN--YITGQIIKVDG 233

Query: 250 G 250
           G
Sbjct: 234 G 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  138 bits (349), Expect = 5e-40
 Identities = 87/247 (35%), Positives = 126/247 (51%), Gaps = 8/247 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R +GKVAIVT +  G G GIA R   EGA VV++     N D A       G   I +  
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADI---NADGAERVAADIGEAAIAIQA 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V+     + ++   + KFG++D++V+NA        +L+  E   D+++ +NVKS  L 
Sbjct: 59  DVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLS 118

Query: 129 LQDAAPHLQKGSSVVLI--SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            Q   PH+++    V+I  +S AG +P+  +  Y  +K  ++  TKA+A E+AP   RVN
Sbjct: 119 AQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVN 178

Query: 186 CVAPGFVPTHFAEYITSNDG--VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           C+ P    T         D    R        L RL T  D+A AA +LASD+AS+ITG 
Sbjct: 179 CLCPVAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPDDIANAALYLASDEASFITGV 238

Query: 244 TLVVAGG 250
            L V GG
Sbjct: 239 ALEVDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  136 bits (343), Expect = 4e-39
 Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 23/257 (8%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            + KVAIVT  +QGIG  +  RL  EG++V+    K+ +    V   K            
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-YNDVDYFK----------VD 52

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           VSN +Q    I+  I K+G+ID++V+NA    S  +I   +E   D++ ++NV    L+ 
Sbjct: 53  VSNKEQVIKGIDYVISKYGRIDILVNNAGIE-SYGAIHAVEEDEWDRIINVNVNGIFLMS 111

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
           +   P++  Q    ++ I+S+  +    + A Y  +K A+LGLT+++A + AP  R   V
Sbjct: 112 KYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAV 171

Query: 188 APGFVPTHF----AEYITSND--GVRQTIEQ---NTLLNRLGTTRDMAAAAAFLASDDAS 238
            PG + T      AE     D   V + I +      + R+G   ++A   AFLASD AS
Sbjct: 172 CPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLAS 231

Query: 239 YITGETLVVAGGMPSRL 255
           +ITGE + V GG+ + +
Sbjct: 232 FITGECVTVDGGLRALI 248

Length = 258

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score =  135 bits (342), Expect = 5e-39
 Identities = 75/238 (31%), Positives = 108/238 (45%), Gaps = 7/238 (2%)

Query: 19  ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRK 77
           A    I + IA+    EGA VV+++        AV +L      +VI     V++ +   
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVI--PLDVTSDEDID 60

Query: 78  NLINQTIEKFGKIDVVVSNAAANPSVD---SILQTKESVLDKLWDINVKSSILLLQDAAP 134
            L  +  E  GKID +V + A +P +      L T      K  DI+  S I L + A P
Sbjct: 61  ELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKP 120

Query: 135 HLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGFVP 193
            + +G S+V +S IA  +        GV K AL  L + LA E+     RVN ++ G   
Sbjct: 121 LMNEGGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVNTISAGPTK 180

Query: 194 THFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
           T     I   D + +  E+   L R  +  ++A AAAFL SD A  ITG+ L V GG 
Sbjct: 181 TTAGSGIGGFDKMVEYAEEMAPLGRNASAEEVANAAAFLLSDLARGITGQILYVDGGF 238

Length = 239

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  134 bits (339), Expect = 2e-38
 Identities = 85/254 (33%), Positives = 132/254 (51%), Gaps = 8/254 (3%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-E 62
           M    R+  KV IVT  ++GIG GI       GA VV  +R +        +L   G   
Sbjct: 1   MASGLRYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGS 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
              V C V+  +  K LI+ T+E+FG+ID +V+NA  +P   +  +T       L ++N+
Sbjct: 61  CKFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNL 120

Query: 123 KSSILLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
            S  L  + A PHL+K   +++ +SS+ G   Q   A Y  TK A+  +TKALA + +  
Sbjct: 121 ISYFLASKYALPHLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRY 180

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDG-VRQTIEQNT---LLNRLGTTRDMAAAAAFLASDD 236
             RVNC++PG + T   E + +       TI++     LL R+GT  +   AA FLA+ +
Sbjct: 181 GVRVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLAA-E 239

Query: 237 ASYITGETLVVAGG 250
           A++ TG  L+++GG
Sbjct: 240 ATFCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  133 bits (336), Expect = 4e-38
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 18/249 (7%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
            GKVA++TA+ QGIG  IA     EGA+V+ +     +++E  +K   RG  +   V  V
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIAT-----DINEEKLKELERGPGITTRVLDV 55

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++ +Q    +    ++ G+IDV+ + A       SIL  ++   D   ++NV+S  L+++
Sbjct: 56  TDKEQ----VAALAKEEGRIDVLFNCAGFVH-HGSILDCEDDDWDFAMNLNVRSMYLMIK 110

Query: 131 DAAPHL--QKGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
              P +  +K  S++ +SS+A   +   +  +Y  TK A++GLTK++AA+ A    R N 
Sbjct: 111 AVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNA 170

Query: 187 VAPGFVPTHFAEYIT----SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           + PG V T   E         +   +       L RL T  ++AA A +LASD+++Y+TG
Sbjct: 171 ICPGTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDESAYVTG 230

Query: 243 ETLVVAGGM 251
             +V+ GG 
Sbjct: 231 TAVVIDGGW 239

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  133 bits (337), Expect = 4e-38
 Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 17/256 (6%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R QGKVA++T +  GIG  +AER   EGA VV++         A +     G   I V 
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADI---KPARARLAALEIGPAAIAVS 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             V+       ++   +E+FG ID++ +NAA    +  IL       D+L+ +NVK    
Sbjct: 59  LDVTRQDSIDRIVAAAVERFGGIDILFNNAALF-DMAPILDISRDSYDRLFAVNVKGLFF 117

Query: 128 LLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           L+Q  A H+    +G  ++ ++S AG + ++ ++ Y  TK A++  T++ A  +      
Sbjct: 118 LMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGIN 177

Query: 184 VNCVAPGFVPT--------HFAEYITSNDG-VRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
           VN +APG V T         FA Y     G  ++ + +   L R+G   D+   A FLAS
Sbjct: 178 VNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLAS 237

Query: 235 DDASYITGETLVVAGG 250
            DA YI  +T  V GG
Sbjct: 238 ADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  133 bits (336), Expect = 5e-38
 Identities = 82/254 (32%), Positives = 123/254 (48%), Gaps = 19/254 (7%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R QGK A++T  T GIG   A +   EGA V ++ R   +++ A  +L   G   + + 
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIR 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
               +   +K L     E FG++D V  NA        +    E++ D+ ++ NVK    
Sbjct: 59  ADAGDVAAQKALAQALAEAFGRLDAVFINAGVA-KFAPLEDWDEAMFDRSFNTNVKGPYF 117

Query: 128 LLQDAAPHLQKGSSVVLISSIAGY--QPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           L+Q   P L   +S+VL  SI  +   P SS+  Y  +K ALL L K L+ E+ P   RV
Sbjct: 118 LIQALLPLLANPASIVLNGSINAHIGMPNSSV--YAASKAALLSLAKTLSGELLPRGIRV 175

Query: 185 NCVAPGFVPTHF-------AEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
           N V+PG V T            +   D V   I+    L R GT  ++A A  +LASD++
Sbjct: 176 NAVSPGPVQTPLYGKLGLPEATL---DAVAAQIQALVPLGRFGTPEEIAKAVLYLASDES 232

Query: 238 SYITGETLVVAGGM 251
           ++I G  ++V GGM
Sbjct: 233 AFIVGSEIIVDGGM 246

Length = 249

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  132 bits (333), Expect = 8e-38
 Identities = 77/246 (31%), Positives = 122/246 (49%), Gaps = 8/246 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKVAIVT    GIG  I       G  VV +   ++         +A G  +  V   V+
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEE---RGADFAEAEGPNLFFVHGDVA 57

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           +    K ++   +EK G+IDV+V+NAA  +  + S L  +E   D++  +N+     L +
Sbjct: 58  DETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEE--WDRILSVNLTGPYELSR 115

Query: 131 DAAPHLQKGSSVVL-ISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP 189
                L K    ++ I+S   +Q +     Y  +K  L+ LT ALA  + PD RVNC++P
Sbjct: 116 YCRDELIKNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPDIRVNCISP 175

Query: 190 GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG 249
           G++ T   +  T+    ++   Q+    R+GT +D+A    FL   DA +ITGET +V G
Sbjct: 176 GWINTTEQQEFTAAPLTQEDHAQH-PAGRVGTPKDIANLVLFLCQQDAGFITGETFIVDG 234

Query: 250 GMPSRL 255
           GM  ++
Sbjct: 235 GMTKKM 240

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  132 bits (333), Expect = 2e-37
 Identities = 79/257 (30%), Positives = 131/257 (50%), Gaps = 6/257 (2%)

Query: 4   MKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
           M + +RF   G+VA+VT S +G+GF IA  L   GA V+V+ R    ++ AV  L+A G 
Sbjct: 1   MSILQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGG 60

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
               +   +++ +       +   + G++D++V+N  A      + +  ++ +  L + +
Sbjct: 61  AAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDR-RPLAELDDAAIRALLETD 119

Query: 122 VKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           + + ILL + AA  +++     ++ I+SIAG   ++  A+Y   K  L GL +ALAAE  
Sbjct: 120 LVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFG 179

Query: 180 P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
           P     N +APG+  T     + ++  V   + Q T L R G   ++A AA FLAS  AS
Sbjct: 180 PHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAAS 239

Query: 239 YITGETLVVAGGMPSRL 255
           Y+ G  L V GG     
Sbjct: 240 YVNGHVLAVDGGYSVHF 256

Length = 256

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  131 bits (331), Expect = 2e-37
 Identities = 83/242 (34%), Positives = 136/242 (56%), Gaps = 8/242 (3%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
           VAIVT    GIG  IA  L   GASVV++  K +  +     ++  G + IG+ C+V++ 
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 74  QQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
           Q  + ++  T+ +FG I ++V+NA    P    +  T+E   +  + +N+ S+  L Q  
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEED-FEWAFKLNLFSAFRLSQLC 119

Query: 133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAP 189
           APH+QK  G +++ ISS++       +A YG +K A+  +T+ LA ++ P   RVN VAP
Sbjct: 120 APHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAP 179

Query: 190 GFVPTH-FAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA 248
           G V T   A  +T    + + + ++T L RLG   D+A AA FL S  +++++G+ L V+
Sbjct: 180 GAVKTDALASVLT--PEIERAMLKHTPLGRLGEPEDIANAALFLCSPASAWVSGQVLTVS 237

Query: 249 GG 250
           GG
Sbjct: 238 GG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  131 bits (332), Expect = 2e-37
 Identities = 83/252 (32%), Positives = 124/252 (49%), Gaps = 9/252 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           RF  KVAIVT +  GIG   AE L  EGASVVV+    +  +    ++ A G   I V  
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQV 62

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAA--ANPSVDSILQTKESVLDKLWDINVKSSI 126
            VS+    K + + T+  FG ID +V+NAA      +D ++        K   +N+  ++
Sbjct: 63  DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL 122

Query: 127 LLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA-PDTR 183
           +  +    H+ K  G ++V  SS A +   +    YG+ K  L GLT+ LA E+   + R
Sbjct: 123 VCTRAVYKHMAKRGGGAIVNQSSTAAWLYSN---FYGLAKVGLNGLTQQLARELGGMNIR 179

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           VN +APG + T  A    +       + +   L+R+GT  D+     FL SD+AS+ITG+
Sbjct: 180 VNAIAPGPIDTE-ATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQ 238

Query: 244 TLVVAGGMPSRL 255
              V GG   R 
Sbjct: 239 IFNVDGGQIIRS 250

Length = 250

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score =  131 bits (332), Expect = 2e-37
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 45/273 (16%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M +RF GKV +VT + QGIG G+A R   EGA VV+  R +  V E   +L+A G E + 
Sbjct: 2   MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALA 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA----ANP----SVDSI-LQTKESVLDK 116
           +   +      +  +   +E FG+IDV+++N      A P      + I  + + S+   
Sbjct: 61  LTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPT 120

Query: 117 LWDINVKSSILLLQDAAPHL--QKGSSVVLISSIA--GYQ--PQSSMAMYGVTKTALLGL 170
           LW           +   PH+  Q G ++V +SSIA  G    P      Y   K  +  L
Sbjct: 121 LW---------CCRAVLPHMLAQGGGAIVNVSSIATRGINRVP------YSAAKGGVNAL 165

Query: 171 TKALAAEMAPD-TRVNCVAPG-------FVPTHFA-----EYITSNDGVRQTIEQNTLLN 217
           T +LA E A    RVN VAPG        VP + A     E       V QT++ ++L+ 
Sbjct: 166 TASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLD-SSLMK 224

Query: 218 RLGTTRDMAAAAAFLASDDASYITGETLVVAGG 250
           R GT  +  AA  FLASD+ASYITG  L V GG
Sbjct: 225 RYGTIDEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  131 bits (332), Expect = 2e-37
 Identities = 83/252 (32%), Positives = 128/252 (50%), Gaps = 12/252 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           +  GK A++T + QGIG GIA      GA++++     + +++   +L  RG     VV 
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVA 61

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V +       I +  EK G+ID++V+NA     + S L   +   D   DIN+K    +
Sbjct: 62  DVRDPASVAAAIKRAKEKEGRIDILVNNAGVC-RLGSFLDMSDEDRDFHIDINIKGVWNV 120

Query: 129 LQDAAPHL--QKGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
            +   P +  +K   +V++SS+ G          Y +TK A++GLTK+LA E A    RV
Sbjct: 121 TKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRV 180

Query: 185 NCVAPGFVPTHFAEYIT--SN----DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
           N + PG+V T  AE I   SN    + V   + +   L RL    ++   AAFLASD++S
Sbjct: 181 NAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESS 240

Query: 239 YITGETLVVAGG 250
           Y+TG   V+ GG
Sbjct: 241 YLTGTQNVIDGG 252

Length = 263

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  132 bits (333), Expect = 3e-37
 Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 11/252 (4%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           K + + +GKVA++T    GIG  +A     EGA + +    +   D    K   + +E  
Sbjct: 39  KGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHE-DANETK---QRVEKE 94

Query: 65  GVVC-----HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           GV C      VS+    K+ + +T+ + G++D++V+NAA      S+       LDK + 
Sbjct: 95  GVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFK 154

Query: 120 INVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
            N+ S   + + A PHL++GS+++   SI GY+   ++  Y  TK A+   T++LA  + 
Sbjct: 155 TNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLV 214

Query: 180 PD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
               RVN VAPG + T         + V Q    NT + R G   ++A A  FLAS D+S
Sbjct: 215 QKGIRVNAVAPGPIWTPLIPSDFDEEKVSQ-FGSNTPMQRPGQPEELAPAYVFLASPDSS 273

Query: 239 YITGETLVVAGG 250
           YITG+ L V GG
Sbjct: 274 YITGQMLHVNGG 285

Length = 290

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  129 bits (326), Expect = 1e-36
 Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 21/256 (8%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIG 65
           R  GKVAI+T    GIG   A      GA VV++     ++D+   +  A  +   ++  
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIA-----DIDDDAGQAVAAELGDPDISF 55

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKS 124
           V C V+     +  ++  + +FG++D++ +NA        SIL+T     +++ D+NV  
Sbjct: 56  VHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYG 115

Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
           + L  + AA  +   K  S+V ++S+AG         Y  +K A+LGLT++ A E+    
Sbjct: 116 AFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHG 175

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQ------TIEQNTLLNRLGTTRDMAAAAAFLASD 235
            RVNCV+P  V T     +T+  GV              L        D+AAA  +LASD
Sbjct: 176 IRVNCVSPYGVAT---PLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLASD 232

Query: 236 DASYITGETLVVAGGM 251
           D+ Y++G+ LVV GG+
Sbjct: 233 DSRYVSGQNLVVDGGL 248

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  129 bits (327), Expect = 2e-36
 Identities = 82/251 (32%), Positives = 136/251 (54%), Gaps = 9/251 (3%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           KR + KVA++T ++ GIG   A  L  EGA V+     +  V E V K+K+ G +     
Sbjct: 2   KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEA-VSETVDKIKSNGGKAKAYH 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             +S+ QQ K+  ++  E+FG++DV+ +NA  + +   I +    V DK+  ++++ + L
Sbjct: 61  VDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFL 120

Query: 128 LLQDAAP-HLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           + +   P  +++G S++  SS +G       + Y   K A++  TK++A E   D  R N
Sbjct: 121 MTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRAN 180

Query: 186 CVAPGFVPTHFAEYI--TSNDGVRQTIEQN----TLLNRLGTTRDMAAAAAFLASDDASY 239
            +APG + T   + +  TS D   +T  +N    T L RLG   ++A    FLASDD+S+
Sbjct: 181 AIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSF 240

Query: 240 ITGETLVVAGG 250
           ITGET+ + GG
Sbjct: 241 ITGETIRIDGG 251

Length = 272

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  128 bits (324), Expect = 3e-36
 Identities = 82/249 (32%), Positives = 127/249 (51%), Gaps = 9/249 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  G+VAIVT +  GIG   A+    EGA VVV+ R  +  +     + A G        
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-RAFARQG 60

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V + +  + L++    ++G++DV+V N A      +++ T E+  D +  +NV    L 
Sbjct: 61  DVGSAEAVEALVDFVAARWGRLDVLV-NNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLW 119

Query: 129 LQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            + A P +Q+  G S+V  +S          A Y  +K A+  LT+A+A + A D  RVN
Sbjct: 120 AKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVN 179

Query: 186 CVAPGFVPT-HFAEYITSNDG---VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            VAPG + T +F      +     +R+ +     +NR GT  ++A AA FLASD++S+ T
Sbjct: 180 AVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFAT 239

Query: 242 GETLVVAGG 250
           G TLVV GG
Sbjct: 240 GTTLVVDGG 248

Length = 252

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  128 bits (325), Expect = 3e-36
 Identities = 90/253 (35%), Positives = 132/253 (52%), Gaps = 10/253 (3%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M     F GK  +V   T GI  GIA+     GA+V V+SR Q+ VD AV +L+  G E 
Sbjct: 1   MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEG 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN---PSVDSILQTKESVLDKLWDI 120
           +GV   V +    +    Q  ++FG IDV+VS AA N   P+        ++V+    DI
Sbjct: 61  LGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVV----DI 116

Query: 121 NVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           ++  +  +L+ A P L++ G+S++ IS+   + P    A     K  +  LT+ LA E  
Sbjct: 117 DLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWG 176

Query: 180 PD-TRVNCVAPGFVP-THFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
           P+  RVN + PG +  T     +  +  ++  + Q+  L R GT +D+A AA FLASD A
Sbjct: 177 PEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMA 236

Query: 238 SYITGETLVVAGG 250
           SYITG  L V GG
Sbjct: 237 SYITGVVLPVDGG 249

Length = 264

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  128 bits (323), Expect = 4e-36
 Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 14/252 (5%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GK A+VT +  GIG  IA  L   GA+VVV+   ++  + A       G  VI +   V+
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
              +  ++I     +FG +D++V+NA     V  I +      D++  + + S+   ++ 
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVNNAGIQ-HVAPIEEFPPEDWDRIIAVMLTSAFHTIRA 119

Query: 132 AAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           A PH++K     ++ I+S  G       + Y   K  L+GLTK LA E+A     VN + 
Sbjct: 120 ALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAIC 179

Query: 189 PGFVPTHF----------AEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
           PG+V T               I     +R+ + +     R  T  ++A  A +LASD A+
Sbjct: 180 PGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETALYLASDAAA 239

Query: 239 YITGETLVVAGG 250
            ITG+ +V+ GG
Sbjct: 240 QITGQAIVLDGG 251

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  127 bits (322), Expect = 6e-36
 Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 8/248 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GKVAI+T ++ GIG   A+    EGA VVV +R+Q  +D+ V +++A G E + +  
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V +    K L+   +E+FG +D+  +NA     +  + +       +    N+ S+ L 
Sbjct: 63  DVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLG 122

Query: 129 LQDAAPHLQK--GSSVVLISSIAGYQ---PQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
            +   P +    G S++  S+  G+    P   MA Y  +K  L+GLT+ LAAE      
Sbjct: 123 AKHQIPAMLARGGGSLIFTSTFVGHTAGFPG--MAAYAASKAGLIGLTQVLAAEYGAQGI 180

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           RVN + PG   T     +         +     L R+    ++A AA FLASD AS++TG
Sbjct: 181 RVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTG 240

Query: 243 ETLVVAGG 250
             L+V GG
Sbjct: 241 TALLVDGG 248

Length = 254

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  127 bits (322), Expect = 8e-36
 Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 14/255 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVI 64
           M    +GKV ++T  + G+G  +A R G E A VV++ R  ++  ++   ++K  G E I
Sbjct: 1   MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAI 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD---KLWDIN 121
            V   V+      NLI   +++FG +DV+++NA     +++ + + E  L+   K+ + N
Sbjct: 61  AVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAG----IENAVPSHEMSLEDWNKVINTN 116

Query: 122 VKSSILLLQDA----APHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +  + L  ++A      H  KG+ ++ +SS+    P      Y  +K  +  +T+ LA E
Sbjct: 117 LTGAFLGSREAIKYFVEHDIKGN-IINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAME 175

Query: 178 MAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
            AP   RVN + PG + T       ++   R  +E    +  +G   ++AA AA+LAS +
Sbjct: 176 YAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSE 235

Query: 237 ASYITGETLVVAGGM 251
           ASY+TG TL   GGM
Sbjct: 236 ASYVTGITLFADGGM 250

Length = 261

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  126 bits (319), Expect = 1e-35
 Identities = 85/252 (33%), Positives = 125/252 (49%), Gaps = 13/252 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
            + RF+GKVA++T  T+GIG  IAE    EGA V V        +    +L+ +G+  I 
Sbjct: 1   YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA---ENEAKELREKGVFTIK 57

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
             C V N  Q K       ++FG++DV+V+NA     +    +  E   +K+  IN+  +
Sbjct: 58  --CDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLM-PFEEFDEEKYNKMIKINLNGA 114

Query: 126 ILLLQDAAPHLQ--KGSSVVLISSIAGYQPQS-SMAMYGVTKTALLGLTKALAAEMAP-D 181
           I    +  P L+  K  ++V I+S AG    +     Y +TK  ++ LT+ LA E+    
Sbjct: 115 IYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYG 174

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGV---RQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
            RVN VAPG+V T       S +     R+     T+L   G   D+A    FLASDDA 
Sbjct: 175 IRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDAR 234

Query: 239 YITGETLVVAGG 250
           YITG+ +V  GG
Sbjct: 235 YITGQVIVADGG 246

Length = 255

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  126 bits (317), Expect = 2e-35
 Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 22/251 (8%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M    QGKV  +T    G+G   A  L   GA V +  R    + + +  + A  + + G
Sbjct: 1   MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   + + Q  +  +++   +FG++D +V+ A A     +I        D+++ +NVK++
Sbjct: 61  I--DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVW-GTIADGDADTWDRMYGVNVKTT 117

Query: 126 ILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
           +   + A P L    G  +V I + A  +    M  Y   K  +  LT+ALAAE+     
Sbjct: 118 LNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGI 177

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLG---TTRDMAAAAAFLASDDASY 239
            VN V P  + T                  +          T   +AA  AFL SD+A  
Sbjct: 178 TVNAVLPSIIDT-------------PPNRADMPDADFSRWVTPEQIAAVIAFLLSDEAQA 224

Query: 240 ITGETLVVAGG 250
           ITG ++ V GG
Sbjct: 225 ITGASIPVDGG 235

Length = 239

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  125 bits (316), Expect = 5e-35
 Identities = 73/255 (28%), Positives = 118/255 (46%), Gaps = 18/255 (7%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           G+VA++T    GIG  + ER   EGA V V  R  + +     +       V+ V   V+
Sbjct: 6   GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDH---VLVVEGDVT 62

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAA----ANPSVDSILQTKESVLDKLWDINVKSSIL 127
           +    +  ++QT++ FGK+D  V NA         VD   +T ++  D+++++NVK  +L
Sbjct: 63  SYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLL 122

Query: 128 LLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
             + A P L+  G S++   S + + P     +Y  +K A++GL + LA E+AP  RVN 
Sbjct: 123 GAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPKIRVNG 182

Query: 187 VAPGFVPTHF---------AEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD-D 236
           VAPG   T              I+ + G+   I   T L       D       LAS  +
Sbjct: 183 VAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRN 242

Query: 237 ASYITGETLVVAGGM 251
           +  +TG  +   GG+
Sbjct: 243 SRALTGVVINADGGL 257

Length = 263

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  125 bits (316), Expect = 6e-35
 Identities = 72/259 (27%), Positives = 124/259 (47%), Gaps = 15/259 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           R  GKVA+VT  TQG+G  IA      GA  +V+  R  +  +    +L+A G + + V 
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQ 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             +S+ +  + ++    E FG++D +V NAA      +IL T   + D+ + +NV++   
Sbjct: 63  ADLSDVEDCRRVVAAADEAFGRLDALV-NAAGLTDRGTILDTSPELFDRHFAVNVRAPFF 121

Query: 128 LLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA-AEMAPDTR 183
           L+Q+A   +++     ++V I S++ +  Q  +A Y  +K AL  LT+  A A +    R
Sbjct: 122 LMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIR 181

Query: 184 VNCVAPGFVPTHF-----AEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
           VN +  G++ T        E+  + D   +         RL    ++A A AFL SD++ 
Sbjct: 182 VNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESG 241

Query: 239 YITGETL----VVAGGMPS 253
            +TG  +     V G    
Sbjct: 242 LMTGSVIDFDQSVWGAYDG 260

Length = 260

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  125 bits (315), Expect = 7e-35
 Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 11/248 (4%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
               GKVAIVT     IG  +A  L   GA V +      N   AV    + G     + 
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADN-GAAVA--ASLGERARFIA 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQ-TKESVLDKLWDINVKSSI 126
             +++    +  +   + +FG++D++V+ A     +D  L  ++   L  L D+N+ S+ 
Sbjct: 59  TDITDDAAIERAVATVVARFGRVDILVNLACT--YLDDGLASSRADWLAAL-DVNLVSAA 115

Query: 127 LLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           +L Q A PHL + G ++V  +SI+    Q+   +Y  +K A+  LT+++A ++APD  RV
Sbjct: 116 MLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRV 175

Query: 185 NCVAPGFVPTHFAEYITSNDGVR--QTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           N V+PG+  +   + ++  D  +  +      LL R+G   ++A   AFL SD AS++TG
Sbjct: 176 NSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTG 235

Query: 243 ETLVVAGG 250
               V GG
Sbjct: 236 ADYAVDGG 243

Length = 261

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  124 bits (313), Expect = 9e-35
 Identities = 80/243 (32%), Positives = 121/243 (49%), Gaps = 4/243 (1%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCH 69
             KVAIVT +++GIG  IA RL  +G +V V+ +      DE V +++A G   I V   
Sbjct: 4   SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQAD 63

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++      L +     FG+IDV+V+NA   P + +I        D+    N++ + ++L
Sbjct: 64  VADAAAVTRLFDAAETAFGRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVL 122

Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           ++AA HL +G  ++ +S+     P      Y  +K A+ GL   LA E+      VN VA
Sbjct: 123 REAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVA 182

Query: 189 PGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA 248
           PG V T       S       +     L RLGT  ++AAA AFLA  D +++ G+ L V 
Sbjct: 183 PGPVATELFFNGKS-AEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVN 241

Query: 249 GGM 251
           GG 
Sbjct: 242 GGF 244

Length = 245

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  129 bits (326), Expect = 1e-34
 Identities = 83/246 (33%), Positives = 123/246 (50%), Gaps = 9/246 (3%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           Q +V +VT +  GIG    +R    G  VVV+ R  +   E    L   G +   +   V
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDV 60

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           S+  Q +    Q   +FG+IDV+V+NA   +P++ + L T      +L  IN+  + L+ 
Sbjct: 61  SDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVA 120

Query: 130 QDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           ++A   +     G+++V ++S AG         Y  +K A++ LT++LA E A    RVN
Sbjct: 121 REALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVN 180

Query: 186 CVAPGFVPTHF-AEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
            V PG+V T   AE   +       +     L RLG   ++A A  FLASD ASYITG T
Sbjct: 181 AVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGST 240

Query: 245 LVVAGG 250
           LVV GG
Sbjct: 241 LVVDGG 246

Length = 520

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  123 bits (311), Expect = 3e-34
 Identities = 74/254 (29%), Positives = 116/254 (45%), Gaps = 10/254 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA--RGIEV 63
           M  R  GKVA+VT + QGIG  IA     EGA+V ++       + A   +     G  V
Sbjct: 1   MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           + V   V++       +    E FG +DV+V+NA  N   D  L   +    + + +++ 
Sbjct: 61  LAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADP-LAMTDEDWRRCFAVDLD 119

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
            +    +   P +  +   S+V I+S   ++       Y V K  LLGLT+AL  E A  
Sbjct: 120 GAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAAR 179

Query: 181 DTRVNCVAPGFVPTHFAE--YITSND--GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
           + RVN +APG++ T   E  +    D    R        + R+G   ++A  A FLASD+
Sbjct: 180 NVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDE 239

Query: 237 ASYITGETLVVAGG 250
           A +I    + + GG
Sbjct: 240 APFINATCITIDGG 253

Length = 260

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  123 bits (310), Expect = 3e-34
 Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 22/254 (8%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R +GKVAIVT   +G+G   A  L  EGA VV+S     ++ +   +  A  +      
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLS-----DILDEEGQAAAAELGDAARF 55

Query: 68  CH--VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV----LDKLWDIN 121
            H  V++      +++   E FG++DV+V+NA           T E+       +L DIN
Sbjct: 56  FHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGI-----LTGGTVETTTLEEWRRLLDIN 110

Query: 122 VKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +    L  +   P +++  G S++ +SSI G     ++A Y  +K A+ GLTK+ A E A
Sbjct: 111 LTGVFLGTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECA 170

Query: 180 P---DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
                 RVN V PG++ T   + +    G       NT + R G   ++A A  +LASD+
Sbjct: 171 TQGYGIRVNSVHPGYIYTPMTDELLIAQGEMG-NYPNTPMGRAGEPDEIAYAVVYLASDE 229

Query: 237 ASYITGETLVVAGG 250
           +S++TG  LVV GG
Sbjct: 230 SSFVTGSELVVDGG 243

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  123 bits (310), Expect = 3e-34
 Identities = 81/255 (31%), Positives = 125/255 (49%), Gaps = 17/255 (6%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           +++R  G+VA++T    GIG   A RL  EGA+VVV      ++D    K  A  +  + 
Sbjct: 1   LSQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVG-----DIDPEAGKAAADEVGGLF 55

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVD-SILQTKESVLDKLWDINVKS 124
           V   V++      L +   E +G +D+  +NA  +P  D SIL T      ++ D+N+ S
Sbjct: 56  VPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTS 115

Query: 125 SILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
             L  + A PH+    KGS +   S +A     +S   Y  +K  +L +++ L  + A  
Sbjct: 116 VYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQ 175

Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL----LNRLGTTRDMAAAAAFLASDD 236
             RVN + PG V T   + + + D  R       L    + R     ++AAA AFLASDD
Sbjct: 176 GIRVNALCPGPVNTPLLQELFAKDPERA---ARRLVHVPMGRFAEPEEIAAAVAFLASDD 232

Query: 237 ASYITGETLVVAGGM 251
           AS+IT  T +V GG+
Sbjct: 233 ASFITASTFLVDGGI 247

Length = 255

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  122 bits (307), Expect = 1e-33
 Identities = 85/261 (32%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVV 67
             +G+VA++T    G+G  + ER   EGA V V  R      E V +L+A  G  V+GV 
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSA----EKVAELRADFGDAVVGVE 56

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTK-ESVLDKLWDINVK 123
             V +    +  + + +E+FGK+D  + NA     + S+  I + K +   D+L+ INVK
Sbjct: 57  GDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVK 116

Query: 124 SSILLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
             IL  + A P L     SV+   S AG+ P     +Y  +K A++GL K LA E+AP  
Sbjct: 117 GYILGAKAALPALYATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPHI 176

Query: 183 RVNCVAPGFVPTH--------FAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
           RVN VAPG + T           E   S   +   ++    L       D   A  FLAS
Sbjct: 177 RVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYTGAYVFLAS 236

Query: 235 -DDASYITGETLVVAGGMPSR 254
             D    TG  +   GGM  R
Sbjct: 237 RGDNRPATGTVINYDGGMGVR 257

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  125 bits (315), Expect = 4e-33
 Identities = 69/241 (28%), Positives = 118/241 (48%), Gaps = 5/241 (2%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            +V  +T   +GIG  +A+R    G  +++  R     + A    +A G E + V   ++
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA---EGAKKLAEALGDEHLSVQADIT 325

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +    ++   Q   ++G++DV+V+NA         L+       +++D+N+  +    + 
Sbjct: 326 DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARA 385

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG 190
           AA  + +G  +V + SIA          Y  +K A+  L+++LA E AP   RVN VAPG
Sbjct: 386 AARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPG 445

Query: 191 FVPTHFAEYITSNDGVR-QTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG 249
           ++ T     + ++      +I +   L RLG   ++A A AFLAS  ASY+ G TL V G
Sbjct: 446 YIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDG 505

Query: 250 G 250
           G
Sbjct: 506 G 506

Length = 520

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  120 bits (302), Expect = 6e-33
 Identities = 84/264 (31%), Positives = 122/264 (46%), Gaps = 33/264 (12%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           QGK+ IVT  + GIG  I + L   GA+VV       N D      +    +   V   V
Sbjct: 8   QGKIIIVTGGSSGIGLAIVKELLANGANVV-------NADIHGGDGQHENYQF--VPTDV 58

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAAN-PSV-------DSILQTKESVLDKLWDINV 122
           S+ ++  + + + IEKFG+ID +V+NA  N P +           +  E+  DK+++IN 
Sbjct: 59  SSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQ 118

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           K   L+ Q  A  +  Q    +V +SS AG +     + Y  TK AL   T++ A E+  
Sbjct: 119 KGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGK 178

Query: 181 -DTRVNCVAPGFV---PTHFAEYITSNDGVR-QTIEQ---------NTLLNRLGTTRDMA 226
            + RV  VAPG +        EY  +    R  T+EQ            L R G   ++A
Sbjct: 179 HNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVA 238

Query: 227 AAAAFLASDDASYITGETLVVAGG 250
               +L SD ASYITG T  +AGG
Sbjct: 239 DLVCYLLSDRASYITGVTTNIAGG 262

Length = 266

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  118 bits (298), Expect = 1e-32
 Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 11/247 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +V +VT +++G+G  IA     EGA VVV+  +     EAV      G   I +   V +
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEA--GERAIAIQADVRD 58

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD-----KLWDINVKSSIL 127
             Q + +I +    FG +D +V+NA  +   D   +     +D     +  +  VK ++ 
Sbjct: 59  RDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALN 118

Query: 128 LLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           LLQ   P  ++  S  V+ I +     P      Y   K ALLG T+ +A E+ P    V
Sbjct: 119 LLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGITV 178

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           N V+ G +    A   T    V   I Q T L ++ T +D+A A  F AS  A  +TG+ 
Sbjct: 179 NMVSGGLLKVTDASAATP-KEVFDAIAQTTPLGKVTTPQDIADAVLFFASPWARAVTGQN 237

Query: 245 LVVAGGM 251
           LVV GG+
Sbjct: 238 LVVDGGL 244

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  119 bits (299), Expect = 1e-32
 Identities = 74/248 (29%), Positives = 125/248 (50%), Gaps = 13/248 (5%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVV----SSRKQKNVDEAVVKLKARGIEVIGVV 67
            +  ++T  + G+G  IA RL  +GA V+V      R +   D     ++A G + +G+ 
Sbjct: 6   SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLA 65

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             V +    +  ++  +E+FG++D++V+NA       +  +      D + D+N+     
Sbjct: 66  FDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDA-AFAELSIEEWDDVIDVNLDGFFN 124

Query: 128 LLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           + Q A P +   ++G  +V I+S+AG +       Y  +K  L+GLTK LA E+AP    
Sbjct: 125 VTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGIT 184

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           VN VAPG + T  A+     + +   +     + RLG   ++AA  AFL SD ASY+TG+
Sbjct: 185 VNAVAPGAINTPMADNAAPTEHLLNPVP----VQRLGEPDEVAALVAFLVSDAASYVTGQ 240

Query: 244 TLVVAGGM 251
            + V GG 
Sbjct: 241 VIPVDGGF 248

Length = 249

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  118 bits (297), Expect = 2e-32
 Identities = 72/244 (29%), Positives = 123/244 (50%), Gaps = 11/244 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV-DEAVVKLKARGIEVIGVVCHVS 71
           K+A+VT + +GIG  IA  L  +G  V+ +     +   +   +      +V      V+
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVT 62

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQ--TKESVLDKLWDINVKSSILLL 129
           + ++    + +  E+ G +D++V+NA    + DS+ +  + +   D + + N+ S   + 
Sbjct: 63  DTEECAEALAEIEEEEGPVDILVNNAGI--TRDSVFKRMSHQEWNDVI-NTNLNSVFNVT 119

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
           Q     +  Q    ++ ISS+ G + Q     Y   K  ++G TKALA+E A     VNC
Sbjct: 120 QPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNC 179

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV 246
           +APG++ T   E +     V Q+I     + RLGT  ++AAA AFL S+ A +ITGET+ 
Sbjct: 180 IAPGYIATPMVEQM--GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETIS 237

Query: 247 VAGG 250
           + GG
Sbjct: 238 INGG 241

Length = 245

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  117 bits (296), Expect = 3e-32
 Identities = 58/201 (28%), Positives = 106/201 (52%), Gaps = 12/201 (5%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA++T  ++GIGF IAE L  EG  V +++R QK ++EA  +L  +G  V+G+   
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAAD 62

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNA--AANPSVD--SILQTKESVLDKLWDINVKSS 125
           V +    +  ++  +  FG +DV+++NA       V+  +  + +  +     D N+  +
Sbjct: 63  VRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVI-----DTNLTGA 117

Query: 126 ILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
              ++ A P L++ G  ++ ISS+AG    +  A Y  +K  L+G ++A   ++     +
Sbjct: 118 FYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIK 177

Query: 184 VNCVAPGFVPTHFAEYITSND 204
           V+ + PG V THF  +  S  
Sbjct: 178 VSTIMPGSVATHFNGHTPSEK 198

Length = 237

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 3e-32
 Identities = 80/252 (31%), Positives = 122/252 (48%), Gaps = 10/252 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M    + KV IVT    GIG  I+ RL  EGA  V+  R   + DE   +L+A       
Sbjct: 1   MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD-DEFAEELRALQPRAEF 59

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   +++  Q ++ + QT+ KFG+ID +V+NA  N  V  +   +E+ +  L + N+   
Sbjct: 60  VQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVG-LEAGREAFVASL-ERNLIHY 117

Query: 126 ILLLQDAAPHLQKG-SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
            ++     PHL+    ++V ISS      Q   + Y   K A L LT+  A  +A D  R
Sbjct: 118 YVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVR 177

Query: 184 VNCVAPGFVPT-HFAEYITSNDGVRQTIEQNT----LLNRLGTTRDMAAAAAFLASDDAS 238
           VN V P  V T  +  +I + D     +   T    L +R+ T  ++A  A FL S+ +S
Sbjct: 178 VNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSS 237

Query: 239 YITGETLVVAGG 250
           + TG+ L V GG
Sbjct: 238 HTTGQWLFVDGG 249

Length = 258

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  117 bits (296), Expect = 4e-32
 Identities = 84/254 (33%), Positives = 122/254 (48%), Gaps = 26/254 (10%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGV 66
              GKVA+VT    GIG  IAE    +GA V +  R      E V ++ A+  G    G+
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDR-----SEDVAEVAAQLLGGNAKGL 66

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD----INV 122
           VC VS+ Q  +  +   I  FG+ID++V++A         L   E V ++ WD    IN+
Sbjct: 67  VCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVAL-----LAPAEDVSEEDWDKTIDINL 121

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           K S L+ Q    H+    G  +V ++S AG         Y  +K  ++G+TK LA E  P
Sbjct: 122 KGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGP 181

Query: 181 -DTRVNCVAPGFVPTHFAEYITSN---DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
               VN ++P  V T   +   +    +  ++ I       R     ++AAAA FLASD 
Sbjct: 182 YGITVNAISPTVVLTELGKKAWAGEKGERAKKLIP----AGRFAYPEEIAAAALFLASDA 237

Query: 237 ASYITGETLVVAGG 250
           A+ ITGE LV+ GG
Sbjct: 238 AAMITGENLVIDGG 251

Length = 255

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  117 bits (295), Expect = 7e-32
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 30/255 (11%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV-- 70
           +VAIVTAS  GIG   A  L  +G  + ++       DE   K  A  +   GV   +  
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHS----DEEGAKETAEEVRSHGVRAEIRQ 58

Query: 71  ---SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD-------KLWDI 120
              S+  +    +++ I++ G+IDV+V+NA A         TK   LD       K++ +
Sbjct: 59  LDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAM--------TKAPFLDMDFDEWRKIFTV 110

Query: 121 NVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +V  + L  Q AA H+ K   G  ++ I+S+  + P    + Y   K AL GLTKA+A E
Sbjct: 111 DVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALE 170

Query: 178 MAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
           +      VN VAPG + T        +  V+        L R G T ++A+  A+L S+ 
Sbjct: 171 LVEHGILVNAVAPGAIATPMNG--MDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEG 228

Query: 237 ASYITGETLVVAGGM 251
           ASY TG++L+V GG 
Sbjct: 229 ASYTTGQSLIVDGGF 243

Length = 256

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score =  117 bits (294), Expect = 7e-32
 Identities = 76/255 (29%), Positives = 125/255 (49%), Gaps = 15/255 (5%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
             +VA+VT +T GIG  IA RLG EG  V V +R ++ +   V +L+  G+E  G  C V
Sbjct: 2   DSEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDV 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
            +  + + L+   + ++G IDV+V+N A      +  +  + +   + + N+     + +
Sbjct: 62  RSVPEIEALVAAAVARYGPIDVLVNN-AGRSGGGATAELADELWLDVVETNLTGVFRVTK 120

Query: 131 D---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           +   A   L++G+  ++ I+S  G Q     A Y  +K  ++G TKAL  E+A     VN
Sbjct: 121 EVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 180

Query: 186 CVAPGFVPT--------HFAEYI-TSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
            V PGFV T        H+A+    S +     I     L R  T  ++A   A+L  D 
Sbjct: 181 AVCPGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYLIGDG 240

Query: 237 ASYITGETLVVAGGM 251
           A+ +T + L V GG+
Sbjct: 241 AAAVTAQALNVCGGL 255

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  117 bits (293), Expect = 8e-32
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 8/247 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVV 67
           +  GKVAIVT   +GIG  I   L  EGA VV++    K   E +V  L   G +V  V 
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS  +    L+ + +  FGK+D++V+NA       +  +      +++ D+N+ S   
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRD-RTFKKLNREDWERVIDVNLSSVFN 121

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
                 P++   +   ++ ISSI G         Y   K  +LG TK+LA E+A  +  V
Sbjct: 122 TTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTV 181

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           N + PGF+ T     +     VRQ I       R G   ++A    +L  D A YITG+ 
Sbjct: 182 NAICPGFIDTEMVAEVPEE--VRQKIVAKIPKKRFGQADEIAKGVVYLCRDGA-YITGQQ 238

Query: 245 LVVAGGM 251
           L + GG+
Sbjct: 239 LNINGGL 245

Length = 247

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  117 bits (295), Expect = 9e-32
 Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 28/266 (10%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            + KVA++T  T  +G  +A  L   GA V    R Q+  D+   ++ A G   I +   
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIAL--- 59

Query: 70  VSNGQQRKNLI---NQTIEKFGKIDVVVSNAAAN---PSVDSILQTKESVLD-------- 115
            ++   R +L     + + +FG +D++++ A  N    + D      E+  +        
Sbjct: 60  AADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEG 119

Query: 116 --KLWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT 171
              ++D+N+  S L  Q     +  QKG S++ ISS+  + P + +  Y   K A+   T
Sbjct: 120 WEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFT 179

Query: 172 KALAAEMA-PDTRVNCVAPGFVPTHFAEYITSNDGVRQT-----IEQNTLLNRLGTTRDM 225
           + LA E A    RVN +APGF  T     +  N     T     I   T + R G   ++
Sbjct: 180 QWLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKILGRTPMGRFGKPEEL 239

Query: 226 AAAAAFLASDDAS-YITGETLVVAGG 250
             A  FLAS+ AS ++TG  + V GG
Sbjct: 240 LGALLFLASEKASSFVTGVVIPVDGG 265

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  116 bits (293), Expect = 9e-32
 Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 28/259 (10%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCH 69
           + K+ ++T +   IG    + L   GA ++++      +++   +L       VI +   
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW----DINVKSS 125
           +++ +  K LI   +EKFG+ID++++NA  +P V       E    + W    ++N+  +
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGS--RFEEFPYEQWNEVLNVNLGGA 118

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAG--------YQPQSSMAM---YGVTKTALLGLTK 172
            L  Q        Q   S++ I+SI G        Y+  + M     Y V K  ++ LTK
Sbjct: 119 FLCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYE-NTQMYSPVEYSVIKAGIIHLTK 177

Query: 173 ALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF 231
            LA   A    RVN ++PG +  +            +   +   L R+    D+  A  F
Sbjct: 178 YLAKYYADTGIRVNAISPGGILNNQPSEFL------EKYTKKCPLKRMLNPEDLRGAIIF 231

Query: 232 LASDDASYITGETLVVAGG 250
           L SD +SY+TG+ LV+ GG
Sbjct: 232 LLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score =  118 bits (296), Expect = 1e-31
 Identities = 75/250 (30%), Positives = 123/250 (49%), Gaps = 9/250 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS--SRKQKNVDEAVVKLKARGIEVIGV 66
           R QG+ A++T +  GIG   A     EGA + ++    ++++  E V  ++A G + + +
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVAL 111

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              + +    + L+ + +++ G +D++V+ A    +V  I        D  +  NV +  
Sbjct: 112 PGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMF 171

Query: 127 LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            L + A PHL  G+S++   SI  YQP  ++  Y  TK A++  TKALA ++A    RVN
Sbjct: 172 WLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVN 231

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQ---NTLLNRLGTTRDMAAAAAFLASDDASYITG 242
            VAPG V T       S     + I      T + R G   +MA     LAS ++SY+TG
Sbjct: 232 AVAPGPVWTPLQ---PSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTG 288

Query: 243 ETLVVAGGMP 252
           E   V GG+ 
Sbjct: 289 EVFGVTGGLL 298

Length = 300

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  116 bits (293), Expect = 1e-31
 Identities = 75/253 (29%), Positives = 119/253 (47%), Gaps = 27/253 (10%)

Query: 11  QGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE--VIGVV 67
            GKV +VTA+   GIG   A R   EGA VV+S   ++ + E   +L A      V  VV
Sbjct: 16  AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVV 75

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           C V++  Q   LI+  +E+ G++DV+V+NA        +  T +    ++ D+ +  +  
Sbjct: 76  CDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDE-WSRVLDVTLTGTFR 134

Query: 128 LLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
             + A  +++    G  +V  +S+ G++ Q   A Y   K  ++ LT+  A E A    R
Sbjct: 135 ATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVR 194

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTR---------DMAAAAAFLAS 234
           +N VAP      F   +TS +          LL+ L             ++A   AFLAS
Sbjct: 195 INAVAPSIAMHPFLAKVTSAE----------LLDELAAREAFGRAAEPWEVANVIAFLAS 244

Query: 235 DDASYITGETLVV 247
           D +SY+TGE + V
Sbjct: 245 DYSSYLTGEVVSV 257

Length = 262

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  116 bits (292), Expect = 2e-31
 Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 11/252 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
              GKVAIVT    G+G G A  L   GA +++++    N DE    ++  G +V  V  
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQV 70

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTKESVLDKLWDINVKSS 125
            ++  +  + ++ + +E+FGKID++V+NA      P    +L+ K+   + + DIN+ S 
Sbjct: 71  DLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAP----LLEYKDEDWNAVMDINLNSV 126

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
             L Q  A  +  Q    ++ I+S+  +Q    +  Y  +K  + GLTKA A E+A  + 
Sbjct: 127 YHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNI 186

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           +VN +APG++ T     I ++      I +     R G   D+  AA FLAS  + Y+ G
Sbjct: 187 QVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNG 246

Query: 243 ETLVVAGGMPSR 254
             L V GG   R
Sbjct: 247 HILAVDGGWLVR 258

Length = 258

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  114 bits (287), Expect = 8e-31
 Identities = 75/247 (30%), Positives = 113/247 (45%), Gaps = 12/247 (4%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
            +VT + QGIG+ +A  L   GA V    R  + + E V  L+  G         V++  
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
               ++ +   ++G IDV+V N A    + +I    +      + +N      + Q  +P
Sbjct: 61  AVDEVVQRLEREYGPIDVLV-NVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119

Query: 135 HL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
            +  ++  ++V + S A   P+  MA Y  +K AL  LTK L  E+AP   R N V+PG 
Sbjct: 120 RMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPGS 179

Query: 192 VPTHFAEYI-TSNDGVRQTI----EQNTL---LNRLGTTRDMAAAAAFLASDDASYITGE 243
             T     +     G +Q I    EQ  L   L ++    D+A A  FLASD AS+IT  
Sbjct: 180 TDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASDLASHITMH 239

Query: 244 TLVVAGG 250
            LVV GG
Sbjct: 240 DLVVDGG 246

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score =  114 bits (287), Expect = 9e-31
 Identities = 75/251 (29%), Positives = 129/251 (51%), Gaps = 16/251 (6%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           G+VA+VT + +GIG GIA  L  EG  VV++   ++   +     KA G     +   V+
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA---KALGENAWFIAMDVA 66

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           +  Q    + + + +FG++D +V NAA A+P   ++     +  +++  +N+   +LL +
Sbjct: 67  DEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAK 126

Query: 131 DAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP 189
             AP+L+    ++V ++S    Q +     Y  +K  LL LT ALA  + P+ RVN V+P
Sbjct: 127 HCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPEIRVNAVSP 186

Query: 190 GFVPT-----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           G++         AE ++  D  +          R+GT  D+AA  A+L S  A ++TG+ 
Sbjct: 187 GWIDARDPSQRRAEPLSEADHAQH------PAGRVGTVEDVAAMVAWLLSRQAGFVTGQE 240

Query: 245 LVVAGGMPSRL 255
            VV GGM  ++
Sbjct: 241 FVVDGGMTRKM 251

Length = 255

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  114 bits (288), Expect = 1e-30
 Identities = 72/271 (26%), Positives = 121/271 (44%), Gaps = 23/271 (8%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
            M      +GKVA++T     +G  +A+ L   GA V +  R Q+  +  V ++KA G E
Sbjct: 1   MMPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN--------------PSVDSILQ 108
            + V   V + +  +    Q +E FG  D++++ A  N                  +   
Sbjct: 61  ALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFD 120

Query: 109 TKESVLDKLWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTA 166
             E   + ++D+N+  ++L  Q  A  +  +KG +++ ISS+  + P + +  Y   K A
Sbjct: 121 LDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAA 180

Query: 167 LLGLTKALAAEMA-PDTRVNCVAPGFVPTHFAEYITSN-DGV----RQTIEQNTLLNRLG 220
           +   T+ LA   A    RVN +APGF  T     +  N DG        I  +T + R G
Sbjct: 181 ISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFG 240

Query: 221 TTRDMAAAAAFLASDDAS-YITGETLVVAGG 250
              ++     +LA + AS ++TG  L V GG
Sbjct: 241 KPEELLGTLLWLADEKASSFVTGVVLPVDGG 271

Length = 278

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  113 bits (285), Expect = 1e-30
 Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 16/246 (6%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVAI+T    GIG   A+ L  +GA V +  R +     A ++     ++   V C V++
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
            +Q      + IEKFG++D++++NA   +              +K  D+N+   I     
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 132 AAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT--RV 184
           A  ++ K     G  +V I S+AG  P     +Y  +K  ++G T++LA  +   T  RV
Sbjct: 121 ALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRV 180

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           N + PGF  T     + + +                +   +A A  +L  DD     G  
Sbjct: 181 NAICPGFTNTPLLPDLVAKEAEMLPSAP------TQSPEVVAKAIVYLIEDDEK--NGAI 232

Query: 245 LVVAGG 250
            +V GG
Sbjct: 233 WIVDGG 238

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  112 bits (283), Expect = 2e-30
 Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 16/223 (7%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT +++GIG  IA  L  +G  V +  R      E +  L A G +V  V     +
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNP----EDLAALSASGGDVEAVPYDARD 56

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            +  + L++   ++FG+IDV+V NA           +    L+  + INV +   L +  
Sbjct: 57  PEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAE-LEAHFSINVIAPAELTRAL 115

Query: 133 APHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAP 189
            P L++  S  VV ++S++G +  +  A Y  +K AL  L  AL  E      RV+ V P
Sbjct: 116 LPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCP 175

Query: 190 GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL 232
           GFV T  A+ +T                 +   +D+A     +
Sbjct: 176 GFVDTPMAQGLTLVGAFP--------PEEMIQPKDIANLVRMV 210

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  113 bits (285), Expect = 2e-30
 Identities = 73/256 (28%), Positives = 115/256 (44%), Gaps = 21/256 (8%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
            A  F GK   VT + QGIG+ +A      GA V+   +     ++              
Sbjct: 2   NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFAT--------- 52

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
            V  VS+      +  + + + G +DV+V NAA    + +     +    + + +N   +
Sbjct: 53  FVLDVSDAAAVAQVCQRLLAETGPLDVLV-NAAGILRMGATDSLSDEDWQQTFAVNAGGA 111

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
             L +   P    Q+  ++V + S A + P+  MA YG +K AL  L K +  E+AP   
Sbjct: 112 FNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGV 171

Query: 183 RVNCVAPGFVPTHFAEYI-TSNDGVRQTI----EQNTL---LNRLGTTRDMAAAAAFLAS 234
           R N V+PG   T     +    DG +Q I    EQ  L   L ++   +++A A  FLAS
Sbjct: 172 RCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLAS 231

Query: 235 DDASYITGETLVVAGG 250
           D AS+IT + +VV GG
Sbjct: 232 DLASHITLQDIVVDGG 247

Length = 252

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  113 bits (285), Expect = 2e-30
 Identities = 81/259 (31%), Positives = 123/259 (47%), Gaps = 23/259 (8%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           RF+GKV +VT + QGIG G+AERL  EGA V++  R +  V E + ++ A G        
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSEL-VHEVLAEILAAGDAAHVHTA 59

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            +      + ++   +E+FG++DV+++N             +E  ++     ++  ++  
Sbjct: 60  DLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWC 119

Query: 129 LQDAAPHL--QKGSSVVLISSIA---GYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
            +   PH+  ++   +V +SSIA    Y+       Y   K  +  LT +LA E A D  
Sbjct: 120 CRAVLPHMLERQQGVIVNVSSIATRGIYR-----IPYSAAKGGVNALTASLAFEHARDGI 174

Query: 183 RVNCVAPG-------FVPTHFAEYITSNDGVRQTIEQNT----LLNRLGTTRDMAAAAAF 231
           RVN VAPG        +P + A          Q I   T    L+ R GT  +   A  F
Sbjct: 175 RVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAILF 234

Query: 232 LASDDASYITGETLVVAGG 250
           LASD+ASYITG  L V GG
Sbjct: 235 LASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  112 bits (283), Expect = 6e-30
 Identities = 91/262 (34%), Positives = 132/262 (50%), Gaps = 24/262 (9%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           ++R  GKVA+VT    GIG  I       GA V +    Q ++ + V         V   
Sbjct: 13  SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDL-QDDLGQNVCDSLGGEPNVCFF 71

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSS 125
            C V+        ++ T++KFG +D++V+NA    P    I   + S  +K++D+NVK  
Sbjct: 72  HCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGV 131

Query: 126 ILLLQDAA----PHLQKGSSVVLIS---SIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
            L ++ AA    P L+KGS V L S   +I G  P +    Y  +K A+LGLT+++AAE+
Sbjct: 132 FLGMKHAARIMIP-LKKGSIVSLCSVASAIGGLGPHA----YTGSKHAVLGLTRSVAAEL 186

Query: 179 APD-TRVNCVAPGFVPT-----HFAEYITSND---GVRQTIEQNTLLNRLG-TTRDMAAA 228
                RVNCV+P  VPT     H  E   + D   G R    +N  L  +  T  D+A A
Sbjct: 187 GKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANA 246

Query: 229 AAFLASDDASYITGETLVVAGG 250
             FLASD+A YI+G  L++ GG
Sbjct: 247 VLFLASDEARYISGLNLMIDGG 268

Length = 280

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 7e-30
 Identities = 79/250 (31%), Positives = 117/250 (46%), Gaps = 5/250 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EV 63
           M   FQ +  +VT    GIG G+A  L   GA+V++  R    +  A  +++A      V
Sbjct: 1   MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
                 V++  Q    ++      G++  VV  A  + ++  I Q       +  D+NV 
Sbjct: 61  RYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVN 120

Query: 124 SSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            ++ +L+ AA  L +  G S V ISSIA          YGVTK+A+  L K  A E+ P 
Sbjct: 121 GTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPS 180

Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
             RVN + PG + T     IT +  +       T L R+G   D+A  A FL SD AS+I
Sbjct: 181 WVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWI 240

Query: 241 TGETLVVAGG 250
           TG+ + V GG
Sbjct: 241 TGQVINVDGG 250

Length = 276

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 1e-29
 Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 15/259 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M     GK A+VT +  GIG  IA  L   GA+V ++   Q   +    ++   G + IG
Sbjct: 1   MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIG 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   V+N       I++  E+FG +D++VSNA     V+ I     +   K+  I+V  +
Sbjct: 61  VAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQ-IVNPIENYSFADWKKMQAIHVDGA 119

Query: 126 ILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
            L  + A  H+ K   G  V+ + S+  ++     + Y   K  LLGL + LA E A  +
Sbjct: 120 FLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHN 179

Query: 182 TRVNCVAPGFVPTHFAEY----------ITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF 231
            R + V PGFV T   +           I+  + V++ +   T+     T  D+A    F
Sbjct: 180 VRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLF 239

Query: 232 LASDDASYITGETLVVAGG 250
           L+S  ++ +TG++ VV+ G
Sbjct: 240 LSSFPSAALTGQSFVVSHG 258

Length = 262

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 1e-29
 Identities = 74/249 (29%), Positives = 129/249 (51%), Gaps = 9/249 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVC 68
            +GKVA+VT +++GIG  IA+RL  +GA V +    +++  +E V ++++ G     +  
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 69  HVSNGQQRKNLIN------QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           ++ +    + L +      Q      K D++++NA   P    I +T E   D++  +N 
Sbjct: 62  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGA-FIEETTEQFFDRMVSVNA 120

Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM-APD 181
           K+   ++Q A   L+  S ++ ISS A          Y +TK A+  +T  LA ++ A  
Sbjct: 121 KAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARG 180

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
             VN + PGF+ T     + S+  ++Q     +  NRLG   D+A  AAFLAS D+ ++T
Sbjct: 181 ITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT 240

Query: 242 GETLVVAGG 250
           G+ + V+GG
Sbjct: 241 GQLIDVSGG 249

Length = 252

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  111 bits (278), Expect = 1e-29
 Identities = 81/248 (32%), Positives = 131/248 (52%), Gaps = 7/248 (2%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           +GKVA+VT +  G+G GIA  L   GA +V + R +    E   +++A G   + +   +
Sbjct: 4   EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADL 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           S+ +  K L++  +E+FG ID++V+NA      D+  +  E   D + ++N+KS   L Q
Sbjct: 62  SDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAE-EFSEKDWDDVMNVNLKSVFFLTQ 120

Query: 131 DAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
            AA H  K   G  ++ I+S+  +Q    +  Y  +K A+ GLTK LA E A     VN 
Sbjct: 121 AAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINVNA 180

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV 246
           +APG++ T+  + + +++     I +     R GT  D+   A FLAS  + Y+ G TL 
Sbjct: 181 IAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLA 240

Query: 247 VAGGMPSR 254
           V GG  +R
Sbjct: 241 VDGGWLAR 248

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  110 bits (278), Expect = 2e-29
 Identities = 71/255 (27%), Positives = 108/255 (42%), Gaps = 14/255 (5%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M MA  F GK  +VT ++ GIG   A  L   GA VV ++R    +D    +     + +
Sbjct: 1   MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
                 V +       I   +   G  D +V+ A    S++S L       D++  +N +
Sbjct: 61  -----DVGDDAA----IRAALAAAGAFDGLVNCAGIA-SLESALDMTAEGFDRVMAVNAR 110

Query: 124 SSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            + L+ +  A  +    +G S+V +SS A          Y  +K AL  +T+ L  E+ P
Sbjct: 111 GAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGP 170

Query: 181 -DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
              RVN V P    T  A    S+      +     L R     D+AA   FL SD AS 
Sbjct: 171 HGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASM 230

Query: 240 ITGETLVVAGGMPSR 254
           ++G +L V GG  +R
Sbjct: 231 VSGVSLPVDGGYTAR 245

Length = 245

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  110 bits (278), Expect = 2e-29
 Identities = 67/261 (25%), Positives = 108/261 (41%), Gaps = 32/261 (12%)

Query: 11  QGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAV-------VKLKARGI 61
             K+A+VT +++  GIG  +  RL  +G  +  +     +            V LK   I
Sbjct: 4   MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE-I 62

Query: 62  EVIGVVCH-----VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDK 116
           E  GV C      +S       +     E+ G   ++++NAA   +   + +     LDK
Sbjct: 63  ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAA-YSTHTRLEELTAEQLDK 121

Query: 117 LWDINVKSSILLLQDAAPH---LQKGSSVVLISSIAGYQPQSSMA---MYGVTKTALLGL 170
            + +NV++++LL    A        G  + L S     Q    M     Y  TK A+   
Sbjct: 122 HYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSG----QSLGPMPDELAYAATKGAIEAF 177

Query: 171 TKALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA 229
           TK+LA E+A     VN V PG   T +       + ++  +       R+G   D A   
Sbjct: 178 TKSLAPELAEKGITVNAVNPGPTDTGWI-----TEELKHHLVPKFPQGRVGEPVDAARLI 232

Query: 230 AFLASDDASYITGETLVVAGG 250
           AFL S++A +ITG+ +   GG
Sbjct: 233 AFLVSEEAKWITGQVIHSEGG 253

Length = 256

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  109 bits (275), Expect = 3e-29
 Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 7/247 (2%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKVAI+T    G+G G+A  L   GA +V          E   +++A G +   +   + 
Sbjct: 8   GKVAIITGCNTGLGQGMAIGLAKAGADIV--GVGVAEAPETQAQVEALGRKFHFITADLI 65

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
             +   ++++Q +E  G ID++++NA      D +L+      D + +IN K+   L Q 
Sbjct: 66  QQKDIDSIVSQAVEVMGHIDILINNAGIIRRQD-LLEFGNKDWDDVININQKTVFFLSQA 124

Query: 132 AAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
            A    K   G  ++ I+S+  +Q    +  Y  +K+A++GLT+ALA E++  +  VN +
Sbjct: 125 VAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAI 184

Query: 188 APGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV 247
           APG++ T     + ++    + I +    +R GT  D+A  A FL+S  + Y+TG TL V
Sbjct: 185 APGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTLAV 244

Query: 248 AGGMPSR 254
            GG  +R
Sbjct: 245 DGGWLAR 251

Length = 251

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  108 bits (272), Expect = 9e-29
 Identities = 75/251 (29%), Positives = 121/251 (48%), Gaps = 23/251 (9%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVCHVS 71
           ++A+VT    GIG  I +RL  +G  V  +    +   EA ++   A G +   V   VS
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVS 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL----W----DINVK 123
           + +  K  + +   + G IDV+V+NA           T+++   K+    W    D N+ 
Sbjct: 61  SFESCKAAVAKVEAELGPIDVLVNNAGI---------TRDATFKKMTYEQWSAVIDTNLN 111

Query: 124 SSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
           S   + Q     +++     ++ ISS+ G + Q     Y   K  ++G TKALA E A  
Sbjct: 112 SVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATK 171

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
              VN ++PG++ T     +   + V  +I     + RLG   ++AAA AFLAS++A YI
Sbjct: 172 GVTVNTISPGYIATDMVMAM--REDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYI 229

Query: 241 TGETLVVAGGM 251
           TG TL + GG+
Sbjct: 230 TGATLSINGGL 240

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  108 bits (273), Expect = 1e-28
 Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 14/251 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            VA+VT   +GIG GIA  L   G  + ++     + +     +L+A G+EVI     V+
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSV-DSILQTKESVLDKLWDINVKSSILLLQ 130
           +    + +++     +G+ID +V+NA     V   +L       D++  IN++    L Q
Sbjct: 63  DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQ 122

Query: 131 DAAPHL--QKGS------SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
             A  +  Q         S+V +SS+       +   Y ++K  L    +  AA +A + 
Sbjct: 123 AVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEG 182

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ-NTLLNRLGTTRDMAAAAAFLASDDASYI 240
             V  V PG + T     +T        I +    + R G   D+A A A LAS D  Y 
Sbjct: 183 IGVYEVRPGLIKTDMTAPVT--AKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYS 240

Query: 241 TGETLVVAGGM 251
           TG+ + V GG+
Sbjct: 241 TGQAIHVDGGL 251

Length = 256

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score =  108 bits (272), Expect = 1e-28
 Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 14/250 (5%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASV-VVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           VAIVT +++GIG  IA  L   G  + +          E V ++ A G   I     +  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSV-DSILQTKESVLDKLWDINVKSSILLLQD 131
               + L++Q  E FG++D +V+NA         +L   E   D+L  IN++    L Q 
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQA 122

Query: 132 AA------PHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
            A      P    G   S++ ++SI  Y    +   Y ++K  L   T+ LA  +A +  
Sbjct: 123 VARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEGI 182

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL-LNRLGTTRDMAAAAAFLASDDASYIT 241
            V+ + PG + T         +   + I    + + R G   D+A A   LAS    Y T
Sbjct: 183 AVHEIRPGLIHTDMT--APVKEKYDELIAAGLVPIRRWGQPEDIAKAVRTLASGLLPYST 240

Query: 242 GETLVVAGGM 251
           G+ + + GG+
Sbjct: 241 GQPINIDGGL 250

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  108 bits (272), Expect = 1e-28
 Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 16/254 (6%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA--RGIEVIGVVCH 69
           GKVA+VT ST GIG GIA  L   GA++V++        EAV    A   G++V+     
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGAD 61

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +S     ++++     +FG +D++V+NA     V  I        D +  +N+ +     
Sbjct: 62  LSKPAAIEDMVAYAQRQFGGVDILVNNAGIQ-HVAPIEDFPTEKWDAIIALNLSAVFHTT 120

Query: 130 QDAAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           + A PH++K     ++ I+S+ G    ++ + Y   K  ++GLTK +A E A      N 
Sbjct: 121 RLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCNA 180

Query: 187 VAPGFVPTHFAEY----ITSNDGVRQTIEQNTLL------NRLGTTRDMAAAAAFLASDD 236
           + PG+V T   E     +   +GV Q      LL       +  T   +   A FLASD 
Sbjct: 181 ICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLASDA 240

Query: 237 ASYITGETLVVAGG 250
           AS ITG  + V GG
Sbjct: 241 ASQITGTAVSVDGG 254

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  108 bits (271), Expect = 2e-28
 Identities = 77/254 (30%), Positives = 110/254 (43%), Gaps = 20/254 (7%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKVA+VT    GIG  IA+RL  EGA+VVV+    +  ++     +      +GV C V+
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGP-RALGVQCDVT 59

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +  Q ++   Q + +FG +D+VVSNA    S   I +T     ++  DIN+    L+ ++
Sbjct: 60  SEAQVQSAFEQAVLEFGGLDIVVSNAGIATS-SPIAETSLEDWNRSMDINLTGHFLVSRE 118

Query: 132 AAP---HLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
           A         G ++V  +S     P  + A Y   K A   L + LA E   D  RVN V
Sbjct: 119 AFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTV 178

Query: 188 APGFVPTHFAEYITSNDGVR--------QTIE---QNTLLNRLGTTRDMAAAAAFLASDD 236
            P  V   F          R           E      LL R     D+A A   +AS+D
Sbjct: 179 NPDAV---FRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAVVAMASED 235

Query: 237 ASYITGETLVVAGG 250
               TG  + V GG
Sbjct: 236 FGKTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score =  108 bits (272), Expect = 2e-28
 Identities = 72/245 (29%), Positives = 116/245 (47%), Gaps = 3/245 (1%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVIGV 66
           R + + A+VT    GIG   A     EGA V +S    +  D   VK  ++  G + + +
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLL 105

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              +S+ +  ++L+++  +  G +D++   A    ++  I         K + INV +  
Sbjct: 106 PGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALF 165

Query: 127 LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            L Q+A P L KG+S++  SSI  YQP   +  Y  TK A+L  ++ LA ++A    RVN
Sbjct: 166 WLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVN 225

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
            VAPG + T                 Q T + R G   ++A    +LAS ++SY+T E  
Sbjct: 226 IVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVH 285

Query: 246 VVAGG 250
            V GG
Sbjct: 286 GVCGG 290

Length = 294

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  107 bits (269), Expect = 3e-28
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 16/194 (8%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD------------EAVVKLKAR 59
           GKVA VT +++GIG  IA RL   GA+VVV+++     D            E   +++A 
Sbjct: 3   GKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAA 62

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G + + +V  V +  Q + L+  T+++FG++D++V+NA A   +  +  T     D +  
Sbjct: 63  GGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAI-WLSLVEDTPAKRFDLMQR 121

Query: 120 INVKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +N++ + LL Q A PH+ K     ++ IS     +P      Y   K  +  LT  LAAE
Sbjct: 122 VNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAE 181

Query: 178 MAP-DTRVNCVAPG 190
           +      VN + P 
Sbjct: 182 LRRHGIAVNSLWPS 195

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 3e-28
 Identities = 78/251 (31%), Positives = 132/251 (52%), Gaps = 19/251 (7%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            KV I+T  + G+G  +A+R   EGA+VV++ R ++ ++EA ++++    +V+ V   V 
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAAN---PSVDSILQTKESVLDKLWDINVKSSILL 128
           N +  + ++ Q  EKFG+ID +++NAA N   P+ D  +    SV+    DI +  +   
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVI----DIVLNGTFYC 116

Query: 129 LQDAAPH-LQKGSSVVLISSIAGYQPQSSMAMYGV-----TKTALLGLTKALAAEMAPD- 181
            Q    + ++KG    +I+ +A Y      A  GV      K  +L +T+ LA E     
Sbjct: 117 SQAVGKYWIEKGIKGNIINMVATYAWD---AGPGVIHSAAAKAGVLAMTRTLAVEWGRKY 173

Query: 182 -TRVNCVAPGFVP-THFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
             RVN +APG +  T  A+ +  ++   +   Q+  L RLGT  ++A  A FL SD+A+Y
Sbjct: 174 GIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAY 233

Query: 240 ITGETLVVAGG 250
           I G  + + GG
Sbjct: 234 INGTCITMDGG 244

Length = 252

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  106 bits (268), Expect = 6e-28
 Identities = 76/271 (28%), Positives = 119/271 (43%), Gaps = 38/271 (14%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIE 62
           M       GK A+VT  T+GIG     RL   GA VV ++R +  ++ E V  + A    
Sbjct: 1   MSFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTT 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN--PSVDSILQTKESVLDKLWDI 120
             G             +    +E+ G +D++V     +  P+      T E   D+L ++
Sbjct: 61  AEGC----------AAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDEL-NL 109

Query: 121 NVKSSILLLQDAA--PHL--QKGSSVVLISSIAGYQPQ-SSMAMYGVTKTALLGLTKALA 175
           N+ +++ L  D A  P +  +    ++ ++SI    P   S   Y   K AL   +K+L+
Sbjct: 110 NLLAAVRL--DRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLS 167

Query: 176 AEMAPD-TRVNCVAPGFVPT----HFAEYITSNDGVRQTIEQ------NTL----LNRLG 220
            E+AP   RVN V+PG++ T      AE +    G     E       ++L    L R  
Sbjct: 168 KEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGT--DYEGAKQIIMDSLGGIPLGRPA 225

Query: 221 TTRDMAAAAAFLASDDASYITGETLVVAGGM 251
              ++A   AFLASD A+ ITG   V+ GG 
Sbjct: 226 EPEEVAELIAFLASDRAASITGTEYVIDGGT 256

Length = 260

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 7e-28
 Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 10/250 (4%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           +GK+A++T ++ GIGF IA+     GA++V +   Q+ VD+ +   +  GIE  G VC V
Sbjct: 9   KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDV 68

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++    + +++Q  ++ G ID++V+NA     +  +L+       ++ DI++ +  ++ +
Sbjct: 69  TDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRI-PMLEMSAEDFRQVIDIDLNAPFIVSK 127

Query: 131 DAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
              P + K     ++ I S+     + +++ Y   K  L  LTK +A+E    + + N +
Sbjct: 128 AVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGI 187

Query: 188 APGFVPTHFAEYI--TSNDGVR----QTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            PG++ T     +     DG R    Q I   T   R G   D+A  A FLASD ++++ 
Sbjct: 188 GPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFVN 247

Query: 242 GETLVVAGGM 251
           G  L V GG+
Sbjct: 248 GHILYVDGGI 257

Length = 265

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  106 bits (267), Expect = 7e-28
 Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 32/267 (11%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVV-------------SSRKQKNVDEAVVKLK 57
           +GKVA +T + +G G   A RL  EGA ++                  ++++DE    ++
Sbjct: 2   EGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVE 61

Query: 58  ARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL 117
           A G +V+     V +  + + ++   +E+FG++DVVV+NA    S     +  E   D +
Sbjct: 62  ALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGV-LSYGRSWELSEEQWDTV 120

Query: 118 WDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKAL 174
            DIN+       +   PH+     G S+++ SS+AG +    +A Y   K  L+GLTK L
Sbjct: 121 LDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKTL 180

Query: 175 AAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNR----------LGTTR 223
           A E+A    RVN + P  V T     + + + +R+   +     R               
Sbjct: 181 ANELAEYGIRVNSIHPYSVDTP----MIAPEAMREAFLKYPEAARAFMPALPVSGFVPPE 236

Query: 224 DMAAAAAFLASDDASYITGETLVVAGG 250
           D+A A  +LASD++ YITG  L V  G
Sbjct: 237 DVADAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  106 bits (268), Expect = 7e-28
 Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 6/187 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKV I+T +++GIG  +A RL   GA +V+++R +  +     +L   G E + V   VS
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNA--AANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           + +  + LI   + +FG ID++V+NA        D +     SV +++  +N   ++   
Sbjct: 61  DAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDL--SVFERVMRVNYLGAVYCT 118

Query: 130 QDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
             A PHL+     +V++SS+AG     + + Y  +K AL G   +L  E+A D   V  V
Sbjct: 119 HAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVV 178

Query: 188 APGFVPT 194
            PGFV T
Sbjct: 179 CPGFVAT 185

Length = 263

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score =  105 bits (264), Expect = 1e-27
 Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 12/245 (4%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
           +A+VT +    G   AE L  +G +VV       +  E     +A   E  G      + 
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAE----RQAFESENPGTK--ALSE 56

Query: 74  QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAA 133
           Q+ + L++  ++  G IDV+VSN      ++ I  T E+ + + ++        LLQ A 
Sbjct: 57  QKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAI 116

Query: 134 PHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPG 190
             +    G S++ I+S    +P +  ++YG  + A + L ++LA E++ D   V  + P 
Sbjct: 117 AQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGPN 176

Query: 191 FV--PTHF-AEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV 247
           F   PT+F      +N  +R+ ++++  L RLG   +M A  AFLAS  A  ITG+    
Sbjct: 177 FFNSPTYFPTSDWENNPELRERVKRDVPLGRLGRPDEMGALVAFLASRRADPITGQFFAF 236

Query: 248 AGGMP 252
           AGG  
Sbjct: 237 AGGYL 241

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  105 bits (264), Expect = 2e-27
 Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 25/258 (9%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             GK A++T S +GIG   A+    EGA V +        D  +   +A   E+    C 
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAI-------ADINLEAARATAAEIGPAACA 53

Query: 70  VSNGQQRKNLINQTI----EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +S     +  I++ +    +++G ID++V+NAA    +  I+       D+L+ INV  +
Sbjct: 54  ISLDVTDQASIDRCVAALVDRWGSIDILVNNAALF-DLAPIVDITRESYDRLFAINVSGT 112

Query: 126 ILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
           + ++Q  A  +    +G  ++ ++S AG + ++ + +Y  TK A++ LT++    +    
Sbjct: 113 LFMMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHG 172

Query: 182 TRVNCVAPGFVPTH--------FAEYITSNDGVRQT-IEQNTLLNRLGTTRDMAAAAAFL 232
             VN +APG V           FA Y     G ++  + +     R+G   D+   A FL
Sbjct: 173 INVNAIAPGVVDGEHWDGVDAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFL 232

Query: 233 ASDDASYITGETLVVAGG 250
           AS DA YI  +T  V GG
Sbjct: 233 ASTDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  104 bits (262), Expect = 2e-27
 Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 8/192 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           KVA+VT + +GIGF I  +L   G  +V++++R  +    AV KL+A G+ V      V+
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +    +   +   EK+G +D++V+NA                  +    N   ++ + Q 
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQA 120

Query: 132 AAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA-PDTRVNCVA 188
             P L+K  +  +V +SS  G    S  + YGV+K AL  LT+ LA E+     +VN   
Sbjct: 121 LLPLLKKSPAGRIVNVSSGLG----SLTSAYGVSKAALNALTRILAKELKETGIKVNACC 176

Query: 189 PGFVPTHFAEYI 200
           PG+V T      
Sbjct: 177 PGWVKTDMGGGK 188

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  105 bits (263), Expect = 2e-27
 Identities = 69/249 (27%), Positives = 121/249 (48%), Gaps = 7/249 (2%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA+VT    G+G G+A  LGL  A   +         E + ++ A G   + +   
Sbjct: 8   LEGKVAVVTGCDTGLGQGMA--LGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTAD 65

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +        L+ + + +FG ID++V+NA      D+I +  E   D + ++N+KS   + 
Sbjct: 66  LRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAI-EFSEKDWDDVMNLNIKSVFFMS 124

Query: 130 QDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
           Q AA H      G  ++ I+S+  +Q    +  Y  +K+ ++G+T+ +A E A  +  VN
Sbjct: 125 QAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVN 184

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
            +APG++ T+  + + +++     I       R G   D+     FLAS  + YI G T+
Sbjct: 185 AIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTI 244

Query: 246 VVAGGMPSR 254
            V GG  +R
Sbjct: 245 AVDGGWLAR 253

Length = 253

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score =  105 bits (263), Expect = 3e-27
 Identities = 78/260 (30%), Positives = 116/260 (44%), Gaps = 17/260 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R +G+V +VT    G+G  I +R   EGA V V  +    + E      A G  V+GV  
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELE---AAHGDAVVGVEG 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAA----ANPSVDSILQTKESVLDKLWDINVKS 124
            V +    K  + + +  FGKID ++ NA     +   VD      +   D+++ INVK 
Sbjct: 59  DVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKG 118

Query: 125 SILLLQDAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
            +L ++ A P L     SV+   S AG+ P     +Y   K A++GL K LA E+AP  R
Sbjct: 119 YLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPYVR 178

Query: 184 VNCVAPGFVPTHF--------AEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS- 234
           VN VAPG + +          A+   S   +   ++    + R+    +   A  F A+ 
Sbjct: 179 VNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATR 238

Query: 235 DDASYITGETLVVAGGMPSR 254
            D    TG  L   GGM  R
Sbjct: 239 GDTVPATGAVLNYDGGMGVR 258

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  104 bits (261), Expect = 5e-27
 Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 7/202 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KV ++T  + GIG  +A  L  +G  V+ ++R    ++     L      +  +   V++
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDN---LEVLELDVTD 57

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            +  K  + + IE+FG+IDV+V+NA        + +T    + +L+++NV   + + +  
Sbjct: 58  EESIKAAVKEVIERFGRIDVLVNNAGYG-LFGPLEETSIEEVRELFEVNVFGPLRVTRAF 116

Query: 133 APHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P +  Q    +V +SS+AG  P   +  Y  +K AL  L+++L  E+AP   +V  + P
Sbjct: 117 LPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEP 176

Query: 190 GFVPTHFAEYITSNDGVRQTIE 211
           G V T FA+    +      I 
Sbjct: 177 GPVRTGFADNAAGSALEDPEIS 198

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  103 bits (260), Expect = 6e-27
 Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 10/187 (5%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE----VIGVV 67
           GK  ++T  + GIG  +A+ L  EGA+V++ +R +  ++EAV +++A        V  + 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNA-AANPSVDSILQTKESVLDKLWDINVKSSI 126
             +S+ ++ +    Q +EK G  D+VV+ A  + P +           ++  D+N   S+
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGL--FEDLTAEEFERGMDVNYFGSL 118

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            +     P +  Q+   +V +SS A        + Y  +K AL GL ++L  E+ P + R
Sbjct: 119 NVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIR 178

Query: 184 VNCVAPG 190
           V+ V P 
Sbjct: 179 VSVVYPP 185

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score =  103 bits (258), Expect = 1e-26
 Identities = 75/251 (29%), Positives = 115/251 (45%), Gaps = 16/251 (6%)

Query: 12  GKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           GK  ++T  A+ + I +GIA+ L   GA +  + + +          +  G   + + C 
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSI---LQTKESVLDKLWDINVKSSI 126
           VSN ++ K L  +  + +GK+D +V + A  P V      L T      K  DI+  S +
Sbjct: 61  VSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAYSLV 120

Query: 127 LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY-----GVTKTALLGLTKALAAEMAPD 181
            L + A P +  G S+V +S +      S   +      GV K AL    + LA E+   
Sbjct: 121 SLAKAALPIMNPGGSIVTLSYLG-----SERVVPGYNVMGVAKAALESSVRYLAYELGRK 175

Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
             RVN ++ G + T  A  IT  D + +  EQ   L R  T  ++   AAFL SD +S I
Sbjct: 176 GIRVNAISAGPIKTLAASGITGFDKMLEYSEQRAPLGRNVTAEEVGNTAAFLLSDLSSGI 235

Query: 241 TGETLVVAGGM 251
           TGE + V GG 
Sbjct: 236 TGEIIYVDGGY 246

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  103 bits (258), Expect = 1e-26
 Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 9/194 (4%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M   K   GKVA++T ++ GIG   A  L   GA VV+++R+++ ++    ++ A     
Sbjct: 1   MTTLK---GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAA 55

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           + +   V++    +  I    E+FG+ID++V+NA      D + +      D++ D NVK
Sbjct: 56  LALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLAL-GDPLDEADLDDWDRMIDTNVK 114

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
             +   +   P +  +K   ++ + SIAG  P    A+YG TK A+   +  L  E+A  
Sbjct: 115 GLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGT 174

Query: 181 DTRVNCVAPGFVPT 194
             RV  ++PG V T
Sbjct: 175 GIRVTVISPGLVET 188

Length = 246

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  103 bits (258), Expect = 1e-26
 Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 18/254 (7%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           G+ A+VT S+QGIG+ +AE L   GA V+++ R    +  A   LK +G+    +   V+
Sbjct: 10  GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVT 69

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTK-------ESVLDKLWDINVKS 124
           +    +  I+    + G ID++V+NA         +Q +           ++L   N+ S
Sbjct: 70  DHDAVRAAIDAFEAEIGPIDILVNNAG--------MQFRTPLEDFPADAFERLLRTNISS 121

Query: 125 SILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
              + Q  A H+       ++ I+S+     +  +A Y  TK A+  LTK +A + A   
Sbjct: 122 VFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHG 181

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            + N +APG+  T     + ++      +E+ T   R G   ++  A  FLASD +S++ 
Sbjct: 182 LQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVN 241

Query: 242 GETLVVAGGMPSRL 255
           G  L V GG+ + L
Sbjct: 242 GHVLYVDGGITASL 255

Length = 255

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score =  103 bits (257), Expect = 2e-26
 Identities = 73/251 (29%), Positives = 129/251 (51%), Gaps = 9/251 (3%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGV 66
           K   GKVA+VT +++GIG  IA RL  +GA V +   R ++  DE + ++++ G +   +
Sbjct: 2   KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLI 61

Query: 67  VCHVSNGQQRKNLINQTIEKF------GKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
              +++    K L+ Q   +        +ID++V+NA    +  +I  T E + D++  +
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIG-TQGTIENTTEEIFDEIMAV 120

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           N+K+   L+Q   P L+    V+ ISS       +    YG++K AL  +T  LA  +  
Sbjct: 121 NIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGE 180

Query: 181 -DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
               VN + PG+  T     +  +  +R     +++  R+G   D+A A AFLAS D+ +
Sbjct: 181 RGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRW 240

Query: 240 ITGETLVVAGG 250
           +TG+ + V+GG
Sbjct: 241 VTGQIIDVSGG 251

Length = 254

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 2e-26
 Identities = 77/248 (31%), Positives = 129/248 (52%), Gaps = 12/248 (4%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             GK A++T ++ GIG  +A      GA V +++R    +++   ++   G +V+ V C 
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           VS  QQ  ++++Q   + G ID+ V NA    +V  +L        +L + NV    L  
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGI-ITVTPMLDMPLEEFQRLQNTNVTGVFLTA 125

Query: 130 QDAAPHL---QKGSSVVLISSIAGY---QPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
           Q AA  +    +G  ++  +S++G+    PQ  ++ Y  +K A++ LTKA+A E+AP   
Sbjct: 126 QAAAKAMVKQGQGGVIINTASMSGHIINVPQ-QVSHYCASKAAVIHLTKAMAVELAPHKI 184

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           RVN V+PG++ T   E  T     +   E    L RLG   ++A    +LAS+ +SY+TG
Sbjct: 185 RVNSVSPGYILTELVEPYTE---YQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTG 241

Query: 243 ETLVVAGG 250
             +V+ GG
Sbjct: 242 SDIVIDGG 249

Length = 253

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  102 bits (255), Expect = 3e-26
 Identities = 79/247 (31%), Positives = 117/247 (47%), Gaps = 19/247 (7%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
            IVT + QGIG  +A  L   GA+V+        +D   V L   G  +      V++  
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVI-------ALDLPFVLLLEYGDPLRLTPLDVADAA 53

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
             + + ++ + + G ID +V N A      +         ++ + +NV     LLQ  AP
Sbjct: 54  AVREVCSRLLAEHGPIDALV-NCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAP 112

Query: 135 HL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGF 191
           H+  ++  ++V ++S A + P+ SMA YG +K AL  L+K L  E+AP   R N V+PG 
Sbjct: 113 HMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPGS 172

Query: 192 VPTHFAEYI-TSNDGVRQTI----EQNTL---LNRLGTTRDMAAAAAFLASDDASYITGE 243
             T     +    DG  Q I    EQ  L   L ++    D+A A  FLASD A +IT  
Sbjct: 173 TDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAGHITMH 232

Query: 244 TLVVAGG 250
            LVV GG
Sbjct: 233 DLVVDGG 239

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  101 bits (252), Expect = 8e-26
 Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 8/248 (3%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           + K AIVT    GIG     R   EGA V V    ++  ++    ++A+G       C +
Sbjct: 2   KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDI 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++       +    +  G +DV+V+NA  +       +T+  + ++L  IN+  ++ +  
Sbjct: 62  TDRDSVDTAVAAAEQALGPVDVLVNNAGWD-KFGPFTKTEPPLWERLIAINLTGALHMHH 120

Query: 131 DAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA-PDTRVNCV 187
              P +  +    +V I+S A     S  A+Y   K  L+  +K +A E A     VN V
Sbjct: 121 AVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVV 180

Query: 188 APGFVPTHFAEYITSN----DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
            PG   T   + I       + +R+   +   L RLG   D+  A  F +SDDAS+ITG+
Sbjct: 181 CPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQ 240

Query: 244 TLVVAGGM 251
            L V+GG+
Sbjct: 241 VLSVSGGL 248

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 2e-25
 Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 40/272 (14%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEV 63
           M  + +G+VA+VT  + GIG    E L   GASV +  R ++ +  A  +L+ +  G  +
Sbjct: 2   MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARL 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW--DIN 121
           +   C V +             +FG +D++V+NA         + T     D  W  ++ 
Sbjct: 62  LAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG-----QGRVSTFADTTDDAWRDELE 116

Query: 122 VK-SSILLLQDAA-PHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +K  S++    A  P L+  +  S+V ++S+   QP+  M      +  LL L K+LA E
Sbjct: 117 LKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATE 176

Query: 178 MAPD-TRVNCVAPGFVPT---------------HFAEY---ITSNDGVRQTIEQNTLLNR 218
           +AP   RVN +  G V +                +  +   +    G+         L R
Sbjct: 177 LAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP--------LGR 228

Query: 219 LGTTRDMAAAAAFLASDDASYITGETLVVAGG 250
           LG   + A A  FLAS  +SY TG  + V+GG
Sbjct: 229 LGRPDEAARALFFLASPLSSYTTGSHIDVSGG 260

Length = 265

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  100 bits (250), Expect = 2e-25
 Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 12/248 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +  +VT  ++G+G  IA     EGA VVV+  + ++  EA+      G   I +   V++
Sbjct: 6   QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALAD--ELGDRAIALQADVTD 63

Query: 73  GQQRKNLINQTIEKFGK-IDVVVSNAAANPSVDSILQTKESVLD-----KLWDINVKSSI 126
            +Q + +     E FGK I  VV+NA A+ S D   + K   +      +  + +VK ++
Sbjct: 64  REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
             +Q A P +  Q    ++ I +     P      Y   K ALLGLT+ LAAE+ P    
Sbjct: 124 NTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGIT 183

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           VN V+ G + T  A   T  D V   I   T L ++ T ++ A A  F AS  A  +TG+
Sbjct: 184 VNMVSGGLLRTTDASAATP-DEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQ 242

Query: 244 TLVVAGGM 251
            LVV GG+
Sbjct: 243 NLVVDGGL 250

Length = 253

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  100 bits (250), Expect = 2e-25
 Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 24/260 (9%)

Query: 8   KRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVS--SRKQKNVDEAVVK----LKAR 59
            + + KVA+VT  +   GIG  I + L   GA +  +  +   K +   V +        
Sbjct: 2   NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQE 61

Query: 60  GIEVIGVVCH-----VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVL 114
            +   GV        ++     K L+N+  E+ G   ++V+NAA + + D    T E  L
Sbjct: 62  ELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEE-L 120

Query: 115 DKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMA---MYGVTKTALLGLT 171
           DK + +NV+++ LL    A    K S   +I+  +G Q Q  M     Y  TK A+  LT
Sbjct: 121 DKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSG-QFQGPMVGELAYAATKGAIDALT 179

Query: 172 KALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAA 230
            +LAAE+A     VN + PG   T +       + ++Q +       R+G  +D A    
Sbjct: 180 SSLAAEVAHLGITVNAINPGPTDTGWM-----TEEIKQGLLPMFPFGRIGEPKDAARLIK 234

Query: 231 FLASDDASYITGETLVVAGG 250
           FLAS++A +ITG+ +   GG
Sbjct: 235 FLASEEAEWITGQIIHSEGG 254

Length = 256

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 99.6 bits (249), Expect = 3e-25
 Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 21/255 (8%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           + KV ++T   QG+G  +AE L  +GA + +    Q+ ++EAV +  A G EV G   +V
Sbjct: 4   KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANV 63

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAAN------PSVDSILQTKESV--LDKLWDINV 122
           ++ +  +    Q  E FG+++ +++NA          + D  + +K S+     + D+N+
Sbjct: 64  TDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNL 123

Query: 123 KSSILLLQDAAPHL---QKGSSVVLISSI--AGYQPQSSMAMYGVTKTALLGLTKALAAE 177
               L  ++AA  +        ++ ISSI  AG   Q++   Y  +K  +  +T   A E
Sbjct: 124 TGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTN---YSASKAGVAAMTVTWAKE 180

Query: 178 MAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
           +A    RV  +APG + T     +       + +E+   + RLG   ++A    F+  +D
Sbjct: 181 LARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMIPVGRLGEPEEIAHTVRFIIEND 238

Query: 237 ASYITGETLVVAGGM 251
             Y+TG  L + GG+
Sbjct: 239 --YVTGRVLEIDGGL 251

Length = 253

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 98.7 bits (246), Expect = 4e-25
 Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 11/190 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           K A+VT +++GIG   A  L  EG  V + +R +  +  A  +       V+G+   V +
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG---VLGLAGDVRD 57

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNA--AANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
               +  ++   E FG +D +V+NA       V+  L  +E  L    D N+  +   + 
Sbjct: 58  EADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEE-LTPEEWRLV--LDTNLTGAFYCIH 114

Query: 131 DAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
            AAP L +  G ++V + S+AG       A Y  +K  LLGL++A   ++   + RV  V
Sbjct: 115 KAAPALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNV 174

Query: 188 APGFVPTHFA 197
            PG V T FA
Sbjct: 175 MPGSVDTGFA 184

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 97.9 bits (244), Expect = 1e-24
 Identities = 78/249 (31%), Positives = 118/249 (47%), Gaps = 13/249 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M   F GK A+VT + +GIG    + L   GA VV  SR Q ++D  V   +  GIE + 
Sbjct: 1   MELDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVR--ECPGIEPVC 58

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   +S+    +  +       G +D++V+NAA    +   L+  +   D+ +D+NV++ 
Sbjct: 59  V--DLSDWDATEEALG----SVGPVDLLVNNAAV-AILQPFLEVTKEAFDRSFDVNVRAV 111

Query: 126 ILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
           I + Q  A  +       S+V +SS A  +  ++  +Y  TK AL  LTK +A E+ P  
Sbjct: 112 IHVSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHK 171

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            RVN V P  V T       S+    + +     L +     D+  A  FL SD +S  T
Sbjct: 172 IRVNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKSSMTT 231

Query: 242 GETLVVAGG 250
           G TL V GG
Sbjct: 232 GSTLPVDGG 240

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 97.7 bits (244), Expect = 2e-24
 Identities = 49/192 (25%), Positives = 101/192 (52%), Gaps = 5/192 (2%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCH 69
           +GK A++T ++ GIG  +A++L   G ++++ +R++  ++    +L+ + G+EV  +   
Sbjct: 5   KGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPAD 64

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +S+ +  + L ++  E+ G IDV+V+NA    +    L+      +++  +N+ +   L 
Sbjct: 65  LSDPEALERLEDELKERGGPIDVLVNNAGFG-TFGPFLELSLDEEEEMIQLNILALTRLT 123

Query: 130 QDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           +   P + +  +  ++ I S AG  P   MA+Y  TK  +L  ++AL  E+     +V  
Sbjct: 124 KAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTA 183

Query: 187 VAPGFVPTHFAE 198
           V PG   T F +
Sbjct: 184 VCPGPTRTEFFD 195

Length = 265

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 96.1 bits (239), Expect = 9e-24
 Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 11/252 (4%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK--ARGIEVIGVV 67
           F+ KV ++T    G+G   A RL  EGA + +    ++ ++ A   L   A   EV+ + 
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIK 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS+  Q +  ++ T+E+FG+ID   +NA      +          DK+  IN++    
Sbjct: 61  ADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFY 120

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
            L+     +  Q    +V  +S+ G +   + + Y   K  ++GLT+  A E      R+
Sbjct: 121 GLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRI 180

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIE------QNTLLNRLGTTRDMAAAAAFLASDDAS 238
           N +APG + T   E      G     E          + R G   ++AA  AFL SDDA 
Sbjct: 181 NAIAPGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAAVVAFLLSDDAG 240

Query: 239 YITGETLVVAGG 250
           Y+    + + GG
Sbjct: 241 YVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 95.5 bits (238), Expect = 1e-23
 Identities = 74/252 (29%), Positives = 121/252 (48%), Gaps = 20/252 (7%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI-------GVV 67
           A +T +  G+G  IA R+  +GA V ++       D A +   A  I            V
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTD----INDAAGLDAFAAEINAAHGEGVAFAAV 57

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             V++  Q + L+ Q  +  G + V+V+NA    S  +I Q +     ++  INV+S  L
Sbjct: 58  QDVTDEAQWQALLAQAADAMGGLSVLVNNAGVG-SFGAIEQIELDEWRRVMAINVESIFL 116

Query: 128 LLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA---AEMAPDT 182
             + A P+L+    +S+V ISS+A ++ +     Y  +K A+  LTK++A   A    D 
Sbjct: 117 GCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDV 176

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQ---NTLLNRLGTTRDMAAAAAFLASDDASY 239
           R N + P F+ T   + I    G  +   +      L RLG   D+A A  +LASD++ +
Sbjct: 177 RCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRF 236

Query: 240 ITGETLVVAGGM 251
           +TG  LV+ GG+
Sbjct: 237 VTGAELVIDGGI 248

Length = 251

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 95.0 bits (236), Expect = 2e-23
 Identities = 69/249 (27%), Positives = 123/249 (49%), Gaps = 25/249 (10%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
           +VT +++GIG  IA RL  +G  + V     + + +  V  ++A+G     +   V++  
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 75  QRKNLINQTIEKFGKIDVVVSNA-----AANPSV-----DSILQTKESVLDKLWDINVKS 124
             + L+   I + G    VV NA     AA P++     D ++ T    LD  +++    
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTN---LDGFYNVIHPC 118

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           ++ +++      ++G  ++ ++S++G         Y   K  L+G TKALA E+A     
Sbjct: 119 TMPMIR-----ARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKIT 173

Query: 184 VNCVAPGFVPTHFAEYITSN-DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           VNC+APG + T     +  + D   +T+     +NR+G   ++A+ A FL SD ASY+T 
Sbjct: 174 VNCIAPGLIDTEMLAEVEHDLDEALKTVP----MNRMGQPAEVASLAGFLMSDGASYVTR 229

Query: 243 ETLVVAGGM 251
           + + V GGM
Sbjct: 230 QVISVNGGM 238

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 95.2 bits (237), Expect = 2e-23
 Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 10/255 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEV 63
           M+   +GK  +++  T+GIG  I       G ++  +          + +   +  GI+ 
Sbjct: 2   MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKA 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA-----AANPSVDSILQTKESVLDKLW 118
                ++   +  K L  +  E F ++D  +SNA     A        ++ K   L+ ++
Sbjct: 62  KAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIY 121

Query: 119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
              V + ++  Q+AA  ++K  G S++ +SS        + A +G +K A+  + K  A 
Sbjct: 122 TATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAAT 181

Query: 177 EMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
           E+   + RVN V+ G + T   +  T+ + V+   E+ + LNR+G   D+A A  FL S+
Sbjct: 182 ELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSE 241

Query: 236 DASYITGETLVVAGG 250
            AS++TG+T+VV GG
Sbjct: 242 KASWLTGQTIVVDGG 256

Length = 260

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 95.0 bits (237), Expect = 2e-23
 Identities = 63/229 (27%), Positives = 111/229 (48%), Gaps = 9/229 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVC 68
            QGKV I+T ++ GIG  +A  L   GA +V+S+R+++ ++E   +    G      V  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSIL 127
            +S+ +  + ++ + ++ FG +D++++NA  +  S+     T   V  K+ ++N    + 
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSL--FHDTSIDVDRKIMEVNYFGPVA 118

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA-PDTRV 184
           L + A PHL  +   S+V++SSIAG         Y  +K AL G   +L AE++ P+  V
Sbjct: 119 LTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISV 178

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA 233
             V PG + T+ A    S DG      +       G + +  A     A
Sbjct: 179 TVVCPGLIDTNIAMNALSGDG--SMSAKMDDTTANGMSPEECALEILKA 225

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 98.0 bits (244), Expect = 3e-23
 Identities = 71/271 (26%), Positives = 107/271 (39%), Gaps = 21/271 (7%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN---VDEAVVKLK 57
           + +M   K    +VA VT    GIG   A RL  EGA VV++    +    V   +    
Sbjct: 403 LRRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQF 462

Query: 58  ARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL 117
             G   + +   V++ Q  K         +G +D+VV+NA    S     +T        
Sbjct: 463 GAGR-AVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSP-FEETTLQEWQLN 520

Query: 118 WDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKAL 174
            DI      L+ ++A   +++   G ++V I+S        + + Y   K A   L + L
Sbjct: 521 LDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCL 580

Query: 175 AAEMAP-DTRVNCVAP------------GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGT 221
           AAE      RVN V P             +     A Y    D + +   + TLL R   
Sbjct: 581 AAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIF 640

Query: 222 TRDMAAAAAFLASDDASYITGETLVVAGGMP 252
             D+A A  FLAS  +   TG  + V GG+P
Sbjct: 641 PADIAEAVFFLASSKSEKTTGCIITVDGGVP 671

Length = 676

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 93.8 bits (233), Expect = 5e-23
 Identities = 67/243 (27%), Positives = 128/243 (52%), Gaps = 9/243 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           G+ A+VT ++ GIG  IA  L  +GA V +   + + ++    +L  R   V     ++S
Sbjct: 6   GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGER---VKIFPANLS 62

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +  + K L  +       +D++V+NA         ++  +   D + ++N+ ++  L ++
Sbjct: 63  DRDEVKALGQKAEADLEGVDILVNNAGITKD-GLFVRMSDEDWDSVLEVNLTATFRLTRE 121

Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
               +  ++   ++ I+S+ G       A Y  +K  ++G +K+LA E+A  +  VNCVA
Sbjct: 122 LTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVA 181

Query: 189 PGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA 248
           PGF+ +     +  ND  ++ I     + R+GT  ++A+A A+LAS +A+Y+TG+T+ V 
Sbjct: 182 PGFIESAMTGKL--NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVN 239

Query: 249 GGM 251
           GGM
Sbjct: 240 GGM 242

Length = 245

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 94.3 bits (235), Expect = 5e-23
 Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 12/198 (6%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           K F GKVA++T +  G G   A      G  +V++  +Q  +D AV +L+A+G EV+GV 
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVR 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI- 126
             VS+  Q + L +  +E+FG + ++ +NA    +   + +   +  + +  +N+   I 
Sbjct: 62  TDVSDAAQVEALADAALERFGAVHLLFNNAGVG-AGGLVWENSLADWEWVLGVNLWGVIH 120

Query: 127 -------LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
                  L+L  A         +V  +S+AG     +M +Y V+K A++ LT+ L  +++
Sbjct: 121 GVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLS 180

Query: 180 -PDTRVNC--VAPGFVPT 194
               +V    + P FVPT
Sbjct: 181 LVTDQVGASVLCPYFVPT 198

Length = 287

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 93.7 bits (233), Expect = 5e-23
 Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 12/255 (4%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M       GK  ++T S QGIGF +A  L   GA ++++    +  + AV KL+  GI+ 
Sbjct: 1   MNDLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKA 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKF----GKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
                +V++ Q+    +   IE      G IDV+++NA          +  E   + +  
Sbjct: 61  HAAPFNVTHKQE----VEAAIEHIEKDIGPIDVLINNAGIQRR-HPFTEFPEQEWNDVIA 115

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +N  +  L+ Q  A ++  ++   ++ I S+     + ++  Y  +K A+  LT+ +  E
Sbjct: 116 VNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVE 175

Query: 178 MAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
           +A  + +VN +APG+  T   + +  ++     + + T   R G  +++  AA FL+S  
Sbjct: 176 LARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKA 235

Query: 237 ASYITGETLVVAGGM 251
           + ++ G  L V GGM
Sbjct: 236 SDFVNGHLLFVDGGM 250

Length = 254

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 93.4 bits (232), Expect = 7e-23
 Identities = 64/227 (28%), Positives = 114/227 (50%), Gaps = 11/227 (4%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           QGKVA+VT ++ GIG   A  L  EGA+V +++R+   ++    +L+A G + + +   V
Sbjct: 2   QGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELDV 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTKESVLDKLWDINVKSSIL 127
           ++ QQ    + +T+E  G++D++V+NA      P  D+   T +    ++ D N+   + 
Sbjct: 62  TDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDA--DTTD--WTRMIDTNLLGLMY 117

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
               A PH   +   ++V ISS+AG     + A+Y  TK  +   ++ L  E+     RV
Sbjct: 118 TTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRV 177

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF 231
             + PG V T   ++IT         E+ + + +L    D+AAA  +
Sbjct: 178 VVIEPGTVDTELRDHITHTITKEAYEERISTIRKL-QAEDIAAAVRY 223

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 93.3 bits (232), Expect = 9e-23
 Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 18/253 (7%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKARGIEVIGVV 67
              G+VA VT +  GIG  IA  L   GA V +   +  + + E    ++A G   I + 
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIA 64

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVKS 124
             V++    +  + +T  + G + + V+ A    ANP+ +   +  ++V+D    IN+  
Sbjct: 65  ADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMD----INLTG 120

Query: 125 SILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAEMAP 180
             L  Q  A  + +  G S+V I+S++G      +  A Y  +K  ++ L+K+LA E   
Sbjct: 121 VFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVG 180

Query: 181 D-TRVNCVAPGFVPTHFAEYITSNDGVRQT--IEQNTLLNRLGTTRDMAAAAAFLASDDA 237
              RVN ++PG+  T      T  + V QT   E+ T + R+    +M   A FL SD A
Sbjct: 181 RGIRVNSISPGYTATPMN---TRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAA 237

Query: 238 SYITGETLVVAGG 250
           S+ TG  L+V GG
Sbjct: 238 SFCTGVDLLVDGG 250

Length = 254

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 90.8 bits (226), Expect = 5e-22
 Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 15/240 (6%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGAS--VVVSSRKQKNVDEAVVKLKAR---GIEVIGVVC 68
           V I+T +++GIG  +AE L   G+   VV+ +R +    E + +LK     G+ V  V  
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSE----EPLQELKEELRPGLRVTTVKA 56

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            +S+    + L+    +  G+ D++++NA +   V  I       L K +D+N+ S + L
Sbjct: 57  DLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCL 116

Query: 129 LQDAAPHLQKGSS---VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVN 185
                   +K      VV +SS A   P     +Y  +K A     + LAAE  PD RV 
Sbjct: 117 TSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE-PDVRVL 175

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS--DDASYITGE 243
             APG V T     I       +T  +   L   G   D   +A  LA+  +   + +G 
Sbjct: 176 SYAPGVVDTDMQREIRETSADPETRSRFRSLKEKGELLDPEQSAEKLANLLEKDKFESGA 235

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 90.8 bits (226), Expect = 7e-22
 Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 16/194 (8%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---------SSRKQKNVDEAVVKLKAR 59
           RF G+V +VT +  G+G   A      GA VVV         S +     D+ V ++KA 
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G + +     V +G++   ++   I+ FG++D++V+NA       S  +  E   D +  
Sbjct: 62  GGKAVANYDSVEDGEK---IVKTAIDAFGRVDILVNNAGILRDR-SFAKMSEEDWDLVMR 117

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +++K S  + + A P++  QK   ++  SS AG       A Y   K  LLGL+  LA E
Sbjct: 118 VHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIE 177

Query: 178 MAP-DTRVNCVAPG 190
            A  +   N +AP 
Sbjct: 178 GAKYNITCNTIAPA 191

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 89.8 bits (223), Expect = 1e-21
 Identities = 70/249 (28%), Positives = 123/249 (49%), Gaps = 15/249 (6%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV-KLKARGIEVIGVVCHVS 71
           KV I+T +++GIG   A      G +V ++  + ++  EAVV  ++ +G E + V   V+
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +      L      + G++D +V+NA    +   + Q   + L +++  NV  S L  ++
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCARE 122

Query: 132 AAP-----HLQKGSSVVLISSIAGYQPQSSMAM-YGVTKTALLGLTKALAAEMAPD-TRV 184
           A       H  +G ++V +SS+A         + Y  +K A+  +T  LA E+A +  RV
Sbjct: 123 AVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRV 182

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQ---NTLLNRLGTTRDMAAAAAFLASDDASYIT 241
           N V PG + T     I ++ G    +++      + R GT  ++A A  +L SD+ASY T
Sbjct: 183 NAVRPGVIYTE----IHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTT 238

Query: 242 GETLVVAGG 250
           G  + V+GG
Sbjct: 239 GTFIDVSGG 247

Length = 248

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 89.9 bits (223), Expect = 1e-21
 Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 19/233 (8%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVV 67
           R++G+VA+VT ++ GIG  +A  L   G  VV  +R+   ++    + ++ G   +    
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQ 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSI 126
           C +SN +Q  ++ +    +   +DV ++NA  A P  + +L  K     +++D+NV +  
Sbjct: 63  CDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARP--EPLLSGKTEGWKEMFDVNVLALS 120

Query: 127 LLLQDAAPHLQK----GSSVVLISSIAG--YQPQSSMAMYGVTKTALLGLTKALAAEM-- 178
           +  ++A   +++       ++ I+S++G    P S    Y  TK A+  LT+ L  E+  
Sbjct: 121 ICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELRE 180

Query: 179 -APDTRVNCVAPGFVPTHFAEYITSNDGVRQ--TIEQNTLLNRLGTTRDMAAA 228
                R   ++PG V T FA  +  ND  +   T E    L       D+A A
Sbjct: 181 AKTHIRATSISPGLVETEFAFKLHDNDPEKAAATYESIPCLKP----EDVANA 229

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 87.6 bits (218), Expect = 2e-21
 Identities = 45/170 (26%), Positives = 65/170 (38%), Gaps = 6/170 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV-SSRKQKN--VDEAVVKLKARGIEVIGVVCH 69
              ++T  T G+G  +A  L  EGA  +V  SR+       E V +L+A G EV    C 
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++      L+       G +D VV NA           T E   +++    V  +  L 
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPER-FERVLAPKVTGAWNLH 119

Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +          + VL SS+AG       A Y     AL  L +   AE  
Sbjct: 120 ELTRD--LDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 88.8 bits (221), Expect = 3e-21
 Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 32/252 (12%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV---SSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           + A+VT + + IG  IA  L   G  V V    SR +   +    +++A G   + +   
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDE--AEALAAEIRALGRRAVALQAD 67

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSV---DSILQTKESVLDKLWDINVKSSI 126
           +++  + + L+ +     G I ++V+NA    S+   DS      +  D+    N+++  
Sbjct: 68  LADEAEVRALVARASAALGPITLLVNNA----SLFEYDSAASFTRASWDRHMATNLRAPF 123

Query: 127 LLLQDAAPHLQKGSSVVLISSIAG--YQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRV 184
           +L Q  A  L   +  ++++ I    +        Y ++K AL   T+ LA  +AP  RV
Sbjct: 124 VLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQALAPRIRV 183

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQ------NTLLNRLGTTRDMAAAAAFLASDDAS 238
           N + PG  PT            RQ+ E        T L R  T  ++AAA  +L   DA 
Sbjct: 184 NAIGPG--PTL--------PSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYLL--DAP 231

Query: 239 YITGETLVVAGG 250
            +TG+ + V GG
Sbjct: 232 SVTGQMIAVDGG 243

Length = 258

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 87.7 bits (218), Expect = 7e-21
 Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 9/188 (4%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
           + ++T    GIG  +A      GA VV+    +K  +E    ++  G +V    C VS  
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 74  QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAA 133
           ++      +  ++ G + ++++NA    S   +L+  +  ++K +++N  +     +   
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGV-VSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119

Query: 134 PHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM----APDTRVNC 186
           P +     G  +V I+S+AG    + +A Y  +K A +G  ++L  E+     P  +   
Sbjct: 120 PDMLERNHG-HIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTL 178

Query: 187 VAPGFVPT 194
           V P F+ T
Sbjct: 179 VCPYFINT 186

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 86.7 bits (215), Expect = 2e-20
 Identities = 72/245 (29%), Positives = 121/245 (49%), Gaps = 24/245 (9%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +  +VT +T+GIG  ++ RL   G  V+  +R    +D+   +L A         C +++
Sbjct: 4   RTVLVTGATKGIGLALSLRLANLGHQVIGIARSA--IDDFPGELFA---------CDLAD 52

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
            +Q    + Q  E    +D +V+N   A P    + +   + L  ++D+NV++++ + Q 
Sbjct: 53  IEQTAATLAQINEIHP-VDAIVNNVGIALPQ--PLGKIDLAALQDVYDLNVRAAVQVTQA 109

Query: 132 AAPHLQKGSS--VVLISS--IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
               ++      +V I S  I G   ++S   Y   K+AL+G T+  A E+A     VN 
Sbjct: 110 FLEGMKLREQGRIVNICSRAIFGALDRTS---YSAAKSALVGCTRTWALELAEYGITVNA 166

Query: 187 VAPGFVPTH-FAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
           VAPG + T  F +         + +  +  + RLGT  ++AAA AFL SDDA +ITG+ L
Sbjct: 167 VAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVL 226

Query: 246 VVAGG 250
            V GG
Sbjct: 227 GVDGG 231

Length = 234

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 86.7 bits (215), Expect = 2e-20
 Identities = 68/243 (27%), Positives = 105/243 (43%), Gaps = 8/243 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           + A+VT +  GIG  +A R    G  V+        +      L       + V C +++
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDAR--FVPVACDLTD 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
                  +     + G +DV+V+NA A  +  S+  T  +       +N++++ L ++  
Sbjct: 61  AASLAAALANAAAERGPVDVLVANAGAARAA-SLHDTTPASWRADNALNLEAAYLCVEAV 119

Query: 133 APHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAP 189
              + K S  +VV I S+ G       A Y   K  L+  TK LA E      R N VAP
Sbjct: 120 LEGMLKRSRGAVVNIGSVNGMAALGHPA-YSAAKAGLIHYTKLLAVEYGRFGIRANAVAP 178

Query: 190 GFVPTHFAE-YITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA 248
           G V T   E  + +N  V + +++   L    T  D+A A  FLAS  A  ITG  L V 
Sbjct: 179 GTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVD 238

Query: 249 GGM 251
           GG+
Sbjct: 239 GGL 241

Length = 257

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 85.2 bits (211), Expect = 6e-20
 Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 14/243 (5%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F GK  +V   ++GIG  I  R   +GA+V  +    K+  E +   +  G   +     
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLA--QETGATAVQT--- 58

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
             +   R  +I   + K G +D++V NA      D++    + + D+L+ IN+ +     
Sbjct: 59  --DSADRDAVI-DVVRKSGALDILVVNAGIAVFGDALELDADDI-DRLFKINIHAPYHAS 114

Query: 130 QDAAPHLQKGSSVVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
            +AA  + +G  +++I S+ G + P + MA Y  +K+AL G+ + LA +  P    +N V
Sbjct: 115 VEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVV 174

Query: 188 APGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV 247
            PG + T   +   +N  ++  +     + R G   ++A   A+LA  +AS++TG    +
Sbjct: 175 QPGPIDT---DANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTI 231

Query: 248 AGG 250
            G 
Sbjct: 232 DGA 234

Length = 237

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 84.8 bits (210), Expect = 7e-20
 Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 25/250 (10%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R +GK   +   ++G+G+ +A     EGA V ++SR +  +      L   G  +  VV 
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG-NIHYVVG 60

Query: 69  HVSNGQQRKNLINQTIEKFGKID--VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
            VS+ +  +N+I +  +    ID  VV        +V+       S L+++   ++K  +
Sbjct: 61  DVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEF-----SGLEEMLTNHIKIPL 115

Query: 127 LLLQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAE-MAPDTRV 184
             +  +   L++GSS+VL+SS++G Y+       Y V K  L    + LA+E +    RV
Sbjct: 116 YAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRV 175

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTR----DMAAAAAFLASDDASYI 240
           N +AP  +   F           +       L +LG       D A    +L +D+A ++
Sbjct: 176 NGIAPTTISGDF-----------EPERNWKKLRKLGDDMAPPEDFAKVIIWLLTDEADWV 224

Query: 241 TGETLVVAGG 250
            G  + V GG
Sbjct: 225 DGVVIPVDGG 234

Length = 238

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 69/256 (26%), Positives = 119/256 (46%), Gaps = 27/256 (10%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARGIEVIG 65
           +GK  ++   A+ + I +GIA+ L  +GA +  +    R +K V+E   +L +  +    
Sbjct: 5   EGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLV---- 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVV-------SNAAANPSVDSILQTKESVLDKLW 118
           + C V+N +    L     +K+GK+D +V               +D+   ++E  L  + 
Sbjct: 61  LPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDT---SREGFLIAM- 116

Query: 119 DINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALA 175
           DI+  S   L + A P +  G S++ ++ +     +  +  Y   GV K AL    + LA
Sbjct: 117 DISAYSFTALAKAARPLMNNGGSILTLTYLGS---ERVVPNYNVMGVAKAALEASVRYLA 173

Query: 176 AEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
           A++  +  RVN ++ G + T  A  I     + +  E N  L R  T  ++   AAFL S
Sbjct: 174 ADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLS 233

Query: 235 DDASYITGETLVVAGG 250
           D +S ITGE + V  G
Sbjct: 234 DLSSGITGEIIYVDSG 249

Length = 259

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 85.0 bits (210), Expect = 1e-19
 Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 11/192 (5%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F G+ A++T    GIG          GA VV+    +  + +AV  L+A G +V GV+C 
Sbjct: 4   FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCD 63

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVKSSI 126
           V + ++  +L ++     G +DVV SNA      P V+        V+    D+++  SI
Sbjct: 64  VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVI----DVDLWGSI 119

Query: 127 LLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
             ++   P L     G  VV  +S AG  P + +  YGV K  ++GL + LA E+  D  
Sbjct: 120 HTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGI 179

Query: 183 RVNCVAPGFVPT 194
            V+ + P  V T
Sbjct: 180 GVSVLCPMVVET 191

Length = 275

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 84.5 bits (209), Expect = 2e-19
 Identities = 64/252 (25%), Positives = 125/252 (49%), Gaps = 15/252 (5%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHV 70
           GK+A  TAS++GIGFG+A  L   GA V++ SR ++N+ +A  K+K+   ++V  +V  +
Sbjct: 8   GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADL 67

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           +  +  +  + + ++  G+ D+   +    P     ++      +    + +  ++ L +
Sbjct: 68  TKREDLERTVKE-LKNIGEPDIFFFSTGG-PKPGYFMEMSMEDWEGAVKLLLYPAVYLTR 125

Query: 131 DAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
              P +++     ++  +S+A  +P  ++A+  V + ++ GL + LA E+ P    VN +
Sbjct: 126 ALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGI 185

Query: 188 APGFVPTHFAEYITSNDGVRQ--TIEQ-------NTLLNRLGTTRDMAAAAAFLASDDAS 238
            PG + T     +  +   R+  ++E+          L RLG   ++    AFLASD  S
Sbjct: 186 MPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGS 245

Query: 239 YITGETLVVAGG 250
           YI G  + V GG
Sbjct: 246 YINGAMIPVDGG 257

Length = 263

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 59/258 (22%), Positives = 101/258 (39%), Gaps = 23/258 (8%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV--IGVVCH 69
            +VA+V    Q +G  +   L  EG  V V+    +       ++ A   E    G    
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGAD 61

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVKSSI 126
            ++ Q    L     E FG++D++V NA    A    D  L   +  L     +N+    
Sbjct: 62  ATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSL----QVNLVGYF 117

Query: 127 LLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
           L  ++ +  + +      ++ I+S +G       + Y   K   +GLT++LA ++A    
Sbjct: 118 LCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGI 177

Query: 183 RVNCVAPG----------FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL 232
            V+ +  G           +P +  +     D V Q       L R    +D+     F 
Sbjct: 178 TVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFY 237

Query: 233 ASDDASYITGETLVVAGG 250
           AS  ASY TG+++ V GG
Sbjct: 238 ASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 82.7 bits (205), Expect = 5e-19
 Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 6/193 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHV 70
           G  A+VT +T GIG   AE L   G +V++ SR Q+ +D    +++ + G+E   +    
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSV-DSILQTKESVLDKLWDINVKSSILLL 129
           S G      I + +E    I ++V+N   + S+ +  L+T E  L  + ++NV +++ + 
Sbjct: 61  SAGDDIYERIEKELEGL-DIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMT 119

Query: 130 QDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           +   P + K     +V ISS AG  P   +A Y  +K  L   ++AL  E       V  
Sbjct: 120 RLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQS 179

Query: 187 VAPGFVPTHFAEY 199
           + P  V T  ++ 
Sbjct: 180 LLPYLVATKMSKI 192

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 82.0 bits (203), Expect = 9e-19
 Identities = 52/195 (26%), Positives = 101/195 (51%), Gaps = 4/195 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           MA+  QGK A++T + +GIG  +A  L  EG +V + +R ++N+     +++A G++V+ 
Sbjct: 1   MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVI 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
               VS+ ++    I Q   + G ID++++NA  +      L+   +  +K+  +N+   
Sbjct: 61  ATADVSDYEEVTAAIEQLKNELGSIDILINNAGIS-KFGKFLELDPAEWEKIIQVNLMGV 119

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
               +   P +  ++   ++ ISS AG +  +  + Y  +K  +LGLT++L  E+   + 
Sbjct: 120 YYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNI 179

Query: 183 RVNCVAPGFVPTHFA 197
           RV  + P  V T  A
Sbjct: 180 RVTALTPSTVATDMA 194

Length = 239

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 82.3 bits (204), Expect = 1e-18
 Identities = 66/263 (25%), Positives = 107/263 (40%), Gaps = 49/263 (18%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-------SRKQKNVDEAVVKLKARGIE 62
             GK   +T +++GIG  IA R   +GA++V++        +    +  A  +++A G +
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            + +V  V +  Q    + + +E+FG ID+ V+NA+A  ++     T     D +  INV
Sbjct: 64  ALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASA-INLTGTEDTPMKRFDLMQQINV 122

Query: 123 KSSILLLQDAAPHLQKGSS---------VVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
           + + L+ Q   PHL+K  +         + L           +MA YG++   L      
Sbjct: 123 RGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTL-----G 177

Query: 174 LAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRD-------- 224
           LA E   D   VN + P                 R TI    + N LG            
Sbjct: 178 LAEEFRDDGIAVNALWP-----------------RTTIATAAVRNLLGGDEAMRRSRTPE 220

Query: 225 -MAAAAAFLASDDASYITGETLV 246
            MA AA  + S  A   TG  L+
Sbjct: 221 IMADAAYEILSRPAREFTGNFLI 243

Length = 273

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 81.7 bits (202), Expect = 2e-18
 Identities = 60/259 (23%), Positives = 125/259 (48%), Gaps = 13/259 (5%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M  +   +GKVA+VT ++ G+G   A+ L   GA VV++SR+ + + E   +++A G   
Sbjct: 1   MGRSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAA 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             V   V++ Q  K  +     + G ID++V+N+  + +   ++    +  D ++D N +
Sbjct: 61  HVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVS-TTQKLVDVTPADFDFVFDTNTR 119

Query: 124 SSILLLQDAA----------PHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
            +  + Q+ A           + + G  ++ I+S+AG +    + +Y ++K A++ +T+A
Sbjct: 120 GAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRA 179

Query: 174 LAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL 232
           +A E       VN + PG++ T    +    +  ++ +       R+G   D+      L
Sbjct: 180 MALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLV-SMLPRKRVGKPEDLDGLLLLL 238

Query: 233 ASDDASYITGETLVVAGGM 251
           A+D++ +I G  +    G 
Sbjct: 239 AADESQFINGAIISADDGF 257

Length = 258

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 81.5 bits (202), Expect = 2e-18
 Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 10/190 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVV 67
             +GKV  +T   +GIG   A  L   GA V +      ++DEA+ K  A  +  V+G  
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIG-----DLDEALAKETAAELGLVVGGP 56

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             V++       ++      G IDV+V+NA   P V   L   ++V  ++ D+NV   IL
Sbjct: 57  LDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVIL 115

Query: 128 LLQDAAPH-LQKGSS-VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
             + AAP  + +G   VV ++S+AG  P   MA Y  +K A++G T A   E+      V
Sbjct: 116 GSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHV 175

Query: 185 NCVAPGFVPT 194
           + V P FV T
Sbjct: 176 SVVLPSFVNT 185

Length = 273

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 83.1 bits (206), Expect = 3e-18
 Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
              F GK+ +VT +  GIG   A     EGA VV S     ++DEA  +  A  I   G 
Sbjct: 310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVAS-----DIDEAAAERTAELIRAAGA 364

Query: 67  VCH-----VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
           V H     VS+    +        + G  D+VV+NA    +    L T     D++ D+N
Sbjct: 365 VAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMA-GGFLDTSAEDWDRVLDVN 423

Query: 122 VKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           +   I   +     +     G  +V ++S A Y P  S+  Y  +K A+L L++ L AE+
Sbjct: 424 LWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAEL 483

Query: 179 AP-DTRVNCVAPGFVPT 194
           A     V  + PGFV T
Sbjct: 484 AAAGIGVTAICPGFVDT 500

Length = 582

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 80.4 bits (199), Expect = 3e-18
 Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 14/192 (7%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             G   ++T  T GIG  +A +    G +V+++ R+++ + EA  +L      +  +V  
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPN----IHTIVLD 58

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL---WDINVKSSI 126
           V + +  + L    + ++  +D++++NA     +D  L+   S LDK     D N+   I
Sbjct: 59  VGDAESVEALAEALLSEYPNLDILINNAGIQRPID--LRDPASDLDKADTEIDTNLIGPI 116

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRV 184
            L++   PHL  Q  +++V +SS   + P ++  +Y  TK AL   T AL  ++  DT V
Sbjct: 117 RLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLK-DTGV 175

Query: 185 NCV--APGFVPT 194
             V   P  V T
Sbjct: 176 EVVEIVPPAVDT 187

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 80.9 bits (200), Expect = 3e-18
 Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 15/255 (5%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVV----SSRKQKNVDEAVVKLKARGIEVIGV 66
           +GKV ++    + +G  IA  L  +GA  V     S+  + + +E V  +KA G + +  
Sbjct: 7   KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAF 66

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              ++     + L +     FG+ D+ + N         I++  E+  D+++ +N KS+ 
Sbjct: 67  QADLTTAAAVEKLFDDAKAAFGRPDIAI-NTVGKVLKKPIVEISEAEYDEMFAVNSKSAF 125

Query: 127 LLLQDAAPHLQKGSSVVLI--SSIAGYQPQSSMAMYGVTKTALLGLTKALAAE-MAPDTR 183
             +++A  HL     +V +  S +  + P    + Y  +K  +   T+A + E  A    
Sbjct: 126 FFIKEAGRHLNDNGKIVTLVTSLLGAFTP--FYSAYAGSKAPVEHFTRAASKEFGARGIS 183

Query: 184 VNCVAPGFVPTHFAEYITSNDGV--RQTIEQNTLLNRLGTTR--DMAAAAAFLASDDASY 239
           V  V PG + T F       + V   +T    +  ++ G T   D+     FL + D  +
Sbjct: 184 VTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVT-DGWW 242

Query: 240 ITGETLVVAGGMPSR 254
           ITG+T+++ GG  ++
Sbjct: 243 ITGQTILINGGYTTK 257

Length = 257

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 80.8 bits (200), Expect = 4e-18
 Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 45/267 (16%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVV----SSRKQKNVDEAVVKLKARGIEVIGVV 67
           GK  ++T +   IG  + + +   G  V+          + ++    + K++ + +  V 
Sbjct: 4   GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSL--VE 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV-LDKLWD---INVK 123
             +++ +  +  ++++ EK+GKID  V+ A   P      +    V LD   +   +++ 
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCAY--PRNKDYGKKFFDVSLDDFNENLSLHLG 119

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAG-YQPQ------SSMAM---YGVTKTALLGLT 171
           SS L  Q  A +   Q G ++V ISSI G   P+      +SM     Y   K  ++ LT
Sbjct: 120 SSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLT 179

Query: 172 KALAAEMAPDT-RVNCVAPGFV----PTHF-AEY--ITSNDGVRQTIEQNTLLNRLGTTR 223
           K LA        RVNCV+PG +    P  F   Y    +  G         +L+      
Sbjct: 180 KYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKG---------MLD----PD 226

Query: 224 DMAAAAAFLASDDASYITGETLVVAGG 250
           D+     FL SD + YITG+ ++V  G
Sbjct: 227 DICGTLVFLLSDQSKYITGQNIIVDDG 253

Length = 256

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 80.5 bits (199), Expect = 5e-18
 Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 16/251 (6%)

Query: 12  GKVAIVT--ASTQGIGFGIAERLGLEGASVVVS------SRKQKNVDEAVVKLKARGIEV 63
           GK A+VT  A+ + I +GIA++L   GA + ++       R +K V E    L       
Sbjct: 6   GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPS---- 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPS--VDSILQTKESVLDKLWDI 120
           + + C V +  Q +       +K+GK+D++V   A A     +     T      +  +I
Sbjct: 62  LFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEI 121

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           +  S   L + A P + +G S+V ++ + G +   +  + GV K AL    + LAAE+ P
Sbjct: 122 SAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGP 181

Query: 181 DT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
              RVN ++ G + T  +  +     +   +E+   L R  T  ++   AAFL SD AS 
Sbjct: 182 KNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASG 241

Query: 240 ITGETLVVAGG 250
           ITG+T+ V  G
Sbjct: 242 ITGQTIYVDAG 252

Length = 258

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 79.9 bits (198), Expect = 8e-18
 Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 35/220 (15%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
             KVA+VT ++ GIG   AE+L   G  V  +SR               G+E++     V
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA------PIPGVELL--ELDV 54

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNA------AANPSVDSILQTKESVLDKLWDINVKS 124
           ++    +  +++ I + G+IDV+V+NA      AA  S  SI Q +      L+D NV  
Sbjct: 55  TDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEES--SIAQAQA-----LFDTNVFG 107

Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
            + + +   PH+  Q    ++ ISS+ G+ P   MA+Y  +K A+ G +++L  E+    
Sbjct: 108 ILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFG 167

Query: 182 TRVNCVAPGFVPTHF-----------AEYITSNDGVRQTI 210
            RV+ V P +  T+F           AEY      V + +
Sbjct: 168 IRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAV 207

Length = 270

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 78.5 bits (193), Expect = 2e-17
 Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 23/251 (9%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV-----SSRKQKNVDEAVVKLKARGIEVIGVV 67
           ++A VT    GIG  I +RL  +G  VV      S R+ K +++     KA G + I   
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQ----KALGFDFIASE 59

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
            +V +    K   ++   + G+IDV+V+NA     V     T+E      W   + +++ 
Sbjct: 60  GNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTRED-----WTAVIDTNLT 114

Query: 128 LLQDAAPHLQKG------SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            L +    +  G        ++ ISS+ G + Q     Y   K  + G T +LA E+A  
Sbjct: 115 SLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATK 174

Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
              VN V+PG++ T   + I  +  V + I     + RLG+  ++ +  A+LAS+++ + 
Sbjct: 175 GVTVNTVSPGYIGTDMVKAIRPD--VLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFS 232

Query: 241 TGETLVVAGGM 251
           TG    + GG+
Sbjct: 233 TGADFSLNGGL 243

Length = 246

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 78.5 bits (194), Expect = 2e-17
 Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 25/258 (9%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           G VA+VT    G+G    ERL  +GA VV+         E V KL   G     V   V+
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPG-ETVAKL---GDNCRFVPVDVT 57

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV-----LDKLWDINVKSSI 126
           + +  K  +     KFG++D+VV+ A    +  +  +  +         ++ ++N+  + 
Sbjct: 58  SEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTF 117

Query: 127 LLLQDAAPHLQKGSS--------VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
            +++ AA  + K           ++  +S+A ++ Q   A Y  +K  ++G+T  +A ++
Sbjct: 118 NVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDL 177

Query: 179 APD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT-LLNRLGTTRDMAAAAAFLASDD 236
           AP   RV  +APG   T     +   + VR  + +     +RLG   + A     +  + 
Sbjct: 178 APQGIRVVTIAPGLFDTPLLAGLP--EKVRDFLAKQVPFPSRLGDPAEYAHLVQHIIEN- 234

Query: 237 ASYITGETLVVAGG--MP 252
             Y+ GE + + G   MP
Sbjct: 235 -PYLNGEVIRLDGAIRMP 251

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 78.6 bits (194), Expect = 2e-17
 Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 19/252 (7%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV-KLKARGIEVIGVVCHV 70
           GK+A+VT +++GIG GIA +LG  GA+V ++ R           +++ARG + I V C  
Sbjct: 3   GKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRCDH 62

Query: 71  SNGQQRKNLINQT-IEKFGKIDVVVSNAAANPSVDSIL--------QTKESVLDKLWDIN 121
           S+  + + L  +   E+ G++D++V+NA A  +V  IL        +   ++ D + ++ 
Sbjct: 63  SDDDEVEALFERVAREQQGRLDILVNNAYA--AVQLILVGVAKPFWEEPPTIWDDINNVG 120

Query: 122 VKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +++       AAP + K     +V+ISS  G +   ++A YGV K A+  +   +A E+ 
Sbjct: 121 LRAHYACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNVA-YGVGKAAIDRMAADMAHELK 179

Query: 180 PDTRVNCVA--PGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD-D 236
           P   V  V+  PGFV T     +  +D      ++        TT         LA+D D
Sbjct: 180 PHG-VAVVSLWPGFVRTELVLEMPEDDEGSWHAKERDAFLNGETTEYSGRCVVALAADPD 238

Query: 237 ASYITGETLVVA 248
              ++G  L+  
Sbjct: 239 LMELSGRVLITG 250

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 78.2 bits (193), Expect = 2e-17
 Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 25/243 (10%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           +V   + GIG  +A     EGA V ++SR +  +  A   L      V      +++   
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGA-PVRTAALDITDEAA 59

Query: 76  RKNLINQTIEKFGKIDVVVSNAAANPS--VDSI-LQTKESVLD-KLWDINVKSSILLLQD 131
                 +     G  D VV  AA  P   V ++ L   ++ +D K W             
Sbjct: 60  VDAFFAEA----GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGA-------YRVA 108

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGF 191
            A  +  G S+  +S  A  +P +S  + G    AL  L + LA E+AP  RVN V+PG 
Sbjct: 109 RAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP-VRVNTVSPGL 167

Query: 192 VPTHFAEYITSNDGVRQ----TIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV 247
           V T     +      R+       +     R+G   D+A A  FLA++   + TG T++V
Sbjct: 168 VDTPLWSKLA--GDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLV 223

Query: 248 AGG 250
            GG
Sbjct: 224 DGG 226

Length = 230

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 80.3 bits (199), Expect = 3e-17
 Identities = 77/265 (29%), Positives = 112/265 (42%), Gaps = 47/265 (17%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
            +   GKVA+VT + +GIG  IAE L  +GA VV       +V  A   L A    V G 
Sbjct: 205 DRPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCL-----DVPAAGEALAAVANRVGGT 259

Query: 67  -----VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVL----DKL 117
                +       +   +     E+ G +D+VV NA           T++  L    +  
Sbjct: 260 ALALDITAPDAPAR---IAEHLAERHGGLDIVVHNAGI---------TRDKTLANMDEAR 307

Query: 118 WD--INVK-SSILLLQDA---APHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT 171
           WD  + V   + L + +A   A  L  G  +V +SSI+G         Y  +K  ++GL 
Sbjct: 308 WDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLV 367

Query: 172 KALAAEMAP-DTRVNCVAPGFVPTHFAEYI---TSNDGVRQTIEQNTLLNRL---GTTRD 224
           +ALA  +A     +N VAPGF+ T     I   T   G R        +N L   G   D
Sbjct: 368 QALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRR--------MNSLQQGGLPVD 419

Query: 225 MAAAAAFLASDDASYITGETLVVAG 249
           +A   A+LAS  +  +TG  + V G
Sbjct: 420 VAETIAWLASPASGGVTGNVVRVCG 444

Length = 450

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 78.2 bits (193), Expect = 3e-17
 Identities = 68/260 (26%), Positives = 108/260 (41%), Gaps = 15/260 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M     GK  ++T +++GIG   AE    EG  + + +R    ++     L+A     + 
Sbjct: 1   MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH--GVD 58

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V  H  +         Q   + G ID++V+NA A P    +    ++     W++ V   
Sbjct: 59  VAVHALD-LSSPEAREQLAAEAGDIDILVNNAGAIPG-GGLDDVDDAAWRAGWELKVFGY 116

Query: 126 ILLLQDAAPHLQKGSSVVLISSI--AGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
           I L + A P ++   S V+++ I  AG  P +          AL+  T+AL  +   D  
Sbjct: 117 IDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGV 176

Query: 183 RVNCVAPGFVPTHFAEYITS-------NDGVRQTIEQNTL-LNRLGTTRDMAAAAAFLAS 234
           RV  V PG V T     +          D  R       L L R  T  ++A   AFLAS
Sbjct: 177 RVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLAS 236

Query: 235 DDASYITGETLVVAGGMPSR 254
             + Y +G  + V GG+ +R
Sbjct: 237 PRSGYTSGTVVTVDGGISAR 256

Length = 259

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 78.1 bits (193), Expect = 3e-17
 Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 4/188 (2%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVS 71
           K  ++T ++ GIG   A R    GA ++++ R+ + + E   +L A+  ++V+ +   VS
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           + +  +  +    E+F  ID++V+NA     +D   +      + + D NVK  + + + 
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTRL 120

Query: 132 AAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
             P +   +   ++ + SIAG  P +   +Y  TK A+   +  L  ++     RV  + 
Sbjct: 121 ILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTNIE 180

Query: 189 PGFVPTHF 196
           PG V T F
Sbjct: 181 PGLVETEF 188

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 77.8 bits (192), Expect = 4e-17
 Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 4/189 (2%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
            ++T ++ GIG  +A      G +V +++R+   +DE   +L      V   +  V++ +
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
           + + +I +   + G +D+V+ NA       S+         +  D N+  +  +L+ A P
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGVGKG-TSLGDLSFKAFRETIDTNLLGAAAILEAALP 119

Query: 135 HLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGF 191
             +      +VLISS+A  +     A Y  +K AL  L ++L  ++     RV  + PGF
Sbjct: 120 QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGF 179

Query: 192 VPTHFAEYI 200
           + T     +
Sbjct: 180 IDTPLTANM 188

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 78.0 bits (193), Expect = 4e-17
 Identities = 56/254 (22%), Positives = 101/254 (39%), Gaps = 44/254 (17%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG----IEVIGVV 67
           GKV ++T +  GIG   A  L   GA V+++ R ++  +EA  ++K       +EVI   
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVI--Q 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             +S+    +    + + +F ++D++++NA        +  TK+   +  + +N     L
Sbjct: 59  LDLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRL--TKDG-FELQFAVNYLGHFL 115

Query: 128 LLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAM--------------YGVTKTALLGLT 171
           L     P L+  +   +V +SSIA                        YG +K A +  T
Sbjct: 116 LTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFT 175

Query: 172 KALAAEMAPD--TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLG------TTR 223
           + LA  +     T VN + PG V           + +R+      LL +L       +  
Sbjct: 176 RELARRLEGTGVT-VNALHPGVV---------RTELLRRNGS-FFLLYKLLRPFLKKSPE 224

Query: 224 DMAAAAAFLASDDA 237
             A  A + A+   
Sbjct: 225 QGAQTALYAATSPE 238

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 77.5 bits (191), Expect = 4e-17
 Identities = 75/254 (29%), Positives = 115/254 (45%), Gaps = 25/254 (9%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           KV ++T +++GIG   A      G SV ++ +R     +E    ++A G     V   V+
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAA----ANPSVDSILQTKESVLDKLWDINVKSSIL 127
           N      + +     FG++D +V+NA     + P  D         L +++D NV  + L
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAAR----LRRMFDTNVLGAYL 118

Query: 128 LLQDAAPHLQK-----GSSVVLISSIAGY--QPQSSMAMYGVTKTALLGLTKALAAEMAP 180
             ++AA  L       G ++V +SSIA     P   +  Y  +K A+  LT  LA E+ P
Sbjct: 119 CAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVD-YAGSKGAVDTLTLGLAKELGP 177

Query: 181 D-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ---NTLLNRLGTTRDMAAAAAFLASDD 236
              RVN V PG + T     I ++ G      +    T L R G   ++A    +L SD 
Sbjct: 178 HGVRVNAVRPGLIETE----IHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDA 233

Query: 237 ASYITGETLVVAGG 250
           ASY+TG  L V GG
Sbjct: 234 ASYVTGALLDVGGG 247

Length = 248

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 77.2 bits (190), Expect = 8e-17
 Identities = 79/254 (31%), Positives = 122/254 (48%), Gaps = 22/254 (8%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           +VTAS++GIGF +A  L  +GA VV+SSR ++N+++A+ +LK  G EV  V   +S+   
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDD 62

Query: 76  RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS------SILLL 129
            KNL+ +  E  G ID +V NA  N   +  +  +    D L    +        + LL+
Sbjct: 63  LKNLVKEAWELLGGIDALVWNAG-NVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLI 121

Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA-AEMAPDTRVNCVA 188
           Q       KG  V L SS++  +P   + +  VT+  L+ L K ++        R   V 
Sbjct: 122 QAWLEKKMKGVLVYL-SSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVL 180

Query: 189 PGFVPTHFAE----YITSNDGV-------RQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
            G   T  A      I    GV       R+ +E+ T L R G   ++ +  AFL S++A
Sbjct: 181 LGSFDTPGARENLARIAEERGVSFEETWEREVLER-TPLKRTGRWEELGSLIAFLLSENA 239

Query: 238 SYITGETLVVAGGM 251
            Y+ G T+V  G M
Sbjct: 240 EYMLGSTIVFDGAM 253

Length = 259

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 76.3 bits (188), Expect = 1e-16
 Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 11/193 (5%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
            + K  +VT + +GIG    E L   GA  V  + R   +    V K   +   V+ +  
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDK---VVPLRL 57

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V++ +  K    Q  +    +DVV++NA        + +     L +  D+NV   + L
Sbjct: 58  DVTDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRL 113

Query: 129 LQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            Q  AP L+   G ++V ++S+A  +   +M  Y  +K+A   LT+ L AE+A   T V 
Sbjct: 114 AQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVL 173

Query: 186 CVAPGFVPTHFAE 198
            V PG + T  A 
Sbjct: 174 SVHPGPIDTRMAA 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 76.3 bits (188), Expect = 1e-16
 Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 6/199 (3%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
           V ++T ++ GIG   A      GA VV+++R  + + E   +++  G E I VV  V++ 
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADA 61

Query: 74  QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAA 133
            Q +   +  +E+FG+ID  V+NA                  +++D+N    +     A 
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGVA-VFGRFEDVTPEEFRRVFDVNYLGHVYGTLAAL 120

Query: 134 PHLQKGSSVVLI--SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR---VNCVA 188
           PHL++     LI   S+ GY+     A Y  +K A+ G T++L AE+A D     V  V 
Sbjct: 121 PHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQ 180

Query: 189 PGFVPTHFAEYITSNDGVR 207
           P  + T F  +  S  G +
Sbjct: 181 PTAMNTPFFGHARSYMGKK 199

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 76.5 bits (188), Expect = 2e-16
 Identities = 73/267 (27%), Positives = 109/267 (40%), Gaps = 36/267 (13%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-----KARGIEVIGVVC 68
            A+VT + + IG  IA  L  EG  VV+          A   L       R    +    
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYH---RSAAAASTLAAELNARRPNSAVTCQA 59

Query: 69  HVSNGQQR----KNLINQTIEKFGKIDVVVSNAAA---NPSV-------DSILQTKESVL 114
            +SN        + +I+     FG+ DV+V+NA+A    P +           ++ E  +
Sbjct: 60  DLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQV 119

Query: 115 DKLWDINVKSSILLLQDAAPHLQKGS---------SVVLISSIAGYQPQSSMAMYGVTKT 165
            +L+  N  +   L++  A   Q G+         S+V +      QP     MY + K 
Sbjct: 120 AELFGSNAIAPYFLIKAFAQR-QAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKH 178

Query: 166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRD 224
           AL GLT++ A E+AP   RVN VAPG      A      +  R+ +    L  R  +   
Sbjct: 179 ALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKV---PLGQREASAEQ 235

Query: 225 MAAAAAFLASDDASYITGETLVVAGGM 251
           +A    FL S  A YITG  + V GG+
Sbjct: 236 IADVVIFLVSPKAKYITGTCIKVDGGL 262

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 75.4 bits (186), Expect = 2e-16
 Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
             A++T ++ GIG   A      G  + + +R Q  ++    +L++ G++       +SN
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSN 66

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTKESVLDKLWDINVKSSILLL 129
            +     I + +E+FG  DV+++NA      P ++  L   + V+     +N+ S     
Sbjct: 67  PEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVI----QLNLTSVFQCC 122

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE-MAPDTRVNC 186
               P +  + G  ++ +SSIA          Y V+K AL   TK LA E  +   RV  
Sbjct: 123 SAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCT 182

Query: 187 VAPGFVPT 194
           +  G V T
Sbjct: 183 ITLGAVNT 190

Length = 241

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 74.6 bits (184), Expect = 5e-16
 Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 20/193 (10%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
            ++T +++GIG  +  +L   G + V+++ +  +    +  L A    +  +   V++  
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTD-- 58

Query: 75  QRKNLINQTIE------KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
                I ++ E          +DV+++NA    S     +     L +++ +NV   +LL
Sbjct: 59  ----EIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLL 114

Query: 129 LQDAAPHLQKGSS--VVLISSIAG---YQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
            Q   P L KG+   ++ ISS  G            Y  +K AL  LTK+LA E+  D  
Sbjct: 115 TQAFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRD-G 173

Query: 184 VNCVA--PGFVPT 194
           +  V+  PG+V T
Sbjct: 174 ITVVSLHPGWVRT 186

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 73.7 bits (181), Expect = 1e-15
 Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 15/249 (6%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            +A+VT  ++GIG   A  L  EG +V V+  +      E V  +   G +   +   +S
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADIS 61

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +  Q   +     +    +  +V+NA    +  ++       ++++   NV    L  ++
Sbjct: 62  DENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCRE 121

Query: 132 AAPHLQ-----KGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           A   +       G ++V +SS A           Y  +K A+  LT  L+ E+A    RV
Sbjct: 122 AVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRV 181

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQ---NTLLNRLGTTRDMAAAAAFLASDDASYIT 241
           NCV PGF+ T     + ++ G    +++   N  + R G   ++A A  +L SD ASY+T
Sbjct: 182 NCVRPGFIYTE----MHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVT 237

Query: 242 GETLVVAGG 250
           G  + +AGG
Sbjct: 238 GSFIDLAGG 246

Length = 247

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 73.0 bits (180), Expect = 2e-15
 Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 17/259 (6%)

Query: 4   MKMAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
           M+      GK  +V   A+ Q I +G A      GA + V+    K      V+  A  +
Sbjct: 2   MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA--RPYVEPLAEEL 59

Query: 62  EV-IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD----- 115
           +  I +   V    Q + +  +  E++G++D ++ + A  P  D  L  +  V+D     
Sbjct: 60  DAPIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKED--LHGR--VVDCSREG 115

Query: 116 --KLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
                D++  S I + + A P +  G S++ +S     +   +  + G  K AL    + 
Sbjct: 116 FALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGPVKAALESSVRY 175

Query: 174 LAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL 232
           LAAE+ P   RV+ ++PG + T  A  I   D + +   +   L RL    D+ A AAFL
Sbjct: 176 LAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFL 235

Query: 233 ASDDASYITGETLVVAGGM 251
           ASD A  +TG TL + GG 
Sbjct: 236 ASDAARRLTGNTLYIDGGY 254

Length = 258

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 73.2 bits (180), Expect = 3e-15
 Identities = 74/282 (26%), Positives = 106/282 (37%), Gaps = 62/282 (21%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVV-------------SSRKQKNVDEAVVKLK 57
            G+V IVT +  GIG   A     EGA VVV              S  Q  VDE V    
Sbjct: 5   DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIV---- 60

Query: 58  ARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQ------TKE 111
           A G E +     +++     NL++  +E FG +DV+V+NA        IL+        E
Sbjct: 61  AAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAG-------ILRDRMIANMSE 113

Query: 112 SVLDKLWDINVKSSILLLQDAAPHLQKGS--------SVVLISSIAGYQPQSSMAMYGVT 163
              D +  +++K     L+ AA + +  S         ++  SS AG Q       Y   
Sbjct: 114 EEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAA 173

Query: 164 KTALLGLTKALAAEMAP-DTRVNCVAP----GFVPTHFAEYITSNDGVRQTIEQNTLLNR 218
           K  +  LT   AAE+      VN +AP        T FAE +   +              
Sbjct: 174 KAGIAALTLVAAAELGRYGVTVNAIAPAARTRMTETVFAEMMAKPEE------------- 220

Query: 219 LGTTRDMAAA-----AAFLASDDASYITGETLVVAGGMPSRL 255
            G    MA         +L S ++  +TG+   V GG  S  
Sbjct: 221 -GEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKISVA 261

Length = 286

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 71.1 bits (175), Expect = 4e-15
 Identities = 45/182 (24%), Positives = 64/182 (35%), Gaps = 30/182 (16%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
            IV  +T  IG  +A+ L   G  V+ + R                         +++  
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGRSSG-----------------DYQVDITDEA 43

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKE----SVLDKLWDINVKSSILLLQ 130
             K L     EK G  D +VS A           T       +  KL        I L++
Sbjct: 44  SIKALF----EKVGHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLL-----GQINLVR 94

Query: 131 DAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPG 190
              P+L  G S+ L S I   +P    A       AL G  +A A E+    R+N V+PG
Sbjct: 95  HGLPYLNDGGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRGIRINAVSPG 154

Query: 191 FV 192
            V
Sbjct: 155 VV 156

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 72.1 bits (177), Expect = 5e-15
 Identities = 64/269 (23%), Positives = 102/269 (37%), Gaps = 59/269 (21%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           ++T +  GIG   AE L   G +V+    ++ +V                 +  +S  + 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLREADV-----------------IADLSTPEG 45

Query: 76  RKNLINQTIEKFGK-IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
           R   I   + +    +D +V+ A    +  + L  K         +N      L++   P
Sbjct: 46  RAAAIADVLARCSGVLDGLVNCAGVGGTTVAGLVLK---------VNYFGLRALMEALLP 96

Query: 135 HLQKGS--SVVLISSIAGYQ---------------------------PQSSMAMYGVTKT 165
            L+KG   + V++SSIAG                              Q     Y  +K 
Sbjct: 97  RLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKE 156

Query: 166 ALLGLTKALAAEMAPD--TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN-TLLNRLGTT 222
           AL   T+  AA        RVN VAPG V T   +    +    ++++   T + R    
Sbjct: 157 ALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMGRRAEP 216

Query: 223 RDMAAAAAFLASDDASYITGETLVVAGGM 251
            ++A   AFLASD AS+I G  L V GG+
Sbjct: 217 DEIAPVIAFLASDAASWINGANLFVDGGL 245

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 71.7 bits (176), Expect = 5e-15
 Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           +  G   ++T    GIG  +A+R    G +V++  R ++ + EA    KA   E+   VC
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEA----KAENPEIHTEVC 57

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNA---------AANPSVDSILQTKESVLDKLWD 119
            V++   R+ L+    +++  ++V+++NA          A   +D   Q           
Sbjct: 58  DVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE--------IA 109

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
            N+ + I L     PHL  Q  ++++ +SS   + P +S  +Y  TK A+   T AL  E
Sbjct: 110 TNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLAL-RE 168

Query: 178 MAPDTRVNC--VAPGFVPT 194
              DT V    +AP  V T
Sbjct: 169 QLKDTSVEVIELAPPLVDT 187

Length = 245

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 71.5 bits (176), Expect = 5e-15
 Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 18/244 (7%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F  K  ++T +  GIG   A     +GA V    ++ K   +         +++   +  
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK--PDLSGNFHFLQLDLSDDLEP 60

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +              +    +D++ + A        +L T       ++D N+ S+ LL 
Sbjct: 61  L-------------FDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLT 107

Query: 130 QDAAPH-LQKGSSVVL-ISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           +   P  L++ S +++ + SIA +      A Y  +K AL G TK LA + A D  +V  
Sbjct: 108 RAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFG 167

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV 246
           +APG V T          G+   + + T + R     ++A    FLAS  A Y+ G  + 
Sbjct: 168 IAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVP 227

Query: 247 VAGG 250
           + GG
Sbjct: 228 IDGG 231

Length = 235

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 70.7 bits (173), Expect = 1e-14
 Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 16/241 (6%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG---IEVIGVV 67
             ++ +VT ++ GIG   A      GA+V++  R ++ + +    +   G    +   + 
Sbjct: 3   NDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILD 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
                 +  + L  +    + ++D V+ NA     V  + +    V   +  +NV ++ +
Sbjct: 63  LLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFM 122

Query: 128 LLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           L Q   P L K    S+V  SS  G Q +++   Y V+K A  GL + LA E    + RV
Sbjct: 123 LTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNLRV 182

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           NC+ PG   T           +R +        +L T  D+     +L  DD+   TG T
Sbjct: 183 NCINPGGTRT----------AMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMT 232

Query: 245 L 245
            
Sbjct: 233 F 233

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 21/230 (9%)

Query: 17  VTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQR 76
           +T +  G+G  IA R   EG  + ++   ++  +E +  L+  G +     C V +  Q 
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQL 64

Query: 77  KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW--DINVKSSILLLQDAAP 134
             L     EK+G IDV+V+NA    S     +   S+ D  W   IN+   +   +   P
Sbjct: 65  TALAQACEEKWGGIDVIVNNAGV-ASGGFFEE--LSLEDWDWQIAINLMGVVKGCKAFLP 121

Query: 135 HL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
               QK   +V I+S+AG     +M+ Y V K  ++ L++ L  E+A D   V+ V P F
Sbjct: 122 LFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSF 181

Query: 192 VPTHFAEYI-TSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
             T+  +     N  ++  +    LL +          +   A+D A YI
Sbjct: 182 FQTNLLDSFRGPNPAMKAQV--GKLLEK----------SPITAADIADYI 219

Length = 270

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 70.5 bits (173), Expect = 2e-14
 Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 27/262 (10%)

Query: 6   MAKRFQGKVAIV--TASTQGIGFGIAERLGLEGASVVVSSRKQ---KNVDEAVVKLKARG 60
           M    +GK  +V   A+ + I +GIA  L   GA +V +   +   K V E    L+  G
Sbjct: 1   MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--G 58

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-----------ANPSVDSILQT 109
            E + + C V++ ++         E+ G I  V    A              S D  L  
Sbjct: 59  QESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLA 118

Query: 110 KESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG 169
           +        +I+  S   + ++A   + +G S+V ++ + G +   +  + GV K +L  
Sbjct: 119 Q--------NISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVAKASLEA 170

Query: 170 LTKALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAA 228
             K LA ++  D  RVN ++ G + T  A+ +   + + + IE+   L R  T  ++   
Sbjct: 171 SVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDT 230

Query: 229 AAFLASDDASYITGETLVVAGG 250
           AAFL SD +  +TGE + V  G
Sbjct: 231 AAFLFSDLSRGVTGENIHVDSG 252

Length = 257

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 15/187 (8%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE-VIGVVCH 69
             K  ++T  + G G  +A+     G  VV + R +     A    +A   +  +  +  
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSE----AARADFEALHPDRALARLLD 58

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD---KLWDINVKSSI 126
           V++      ++      FG IDV+V+NA      +  ++  ES L    + +++NV  ++
Sbjct: 59  VTDFDAIDAVVADAEATFGPIDVLVNNAGY--GHEGAIE--ESPLAEMRRQFEVNVFGAV 114

Query: 127 LLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            + +   P ++      +V I+S+ G      +  Y  +K AL G++++LA E+AP    
Sbjct: 115 AMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIH 174

Query: 184 VNCVAPG 190
           V  V PG
Sbjct: 175 VTAVEPG 181

Length = 277

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 68.5 bits (168), Expect = 6e-14
 Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 21/190 (11%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            +V +V      +G  + +     G  V   S      +EA     A  I V+       
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVA--SIDLAENEEA----DAS-IIVLDSDSFT- 52

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAA----NPSVDSILQTKESVLDKLWDINVKSSIL 127
             +Q K ++       GK+D ++  A      +    S ++      D +W  N+ +S +
Sbjct: 53  --EQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVKN----WDLMWKQNLWTSFI 106

Query: 128 LLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE---MAPDTRV 184
               A  HL  G  +VL  + A  +P   M  YG  K A+  LT++LAAE   +   +  
Sbjct: 107 ASHLATKHLLSGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTA 166

Query: 185 NCVAPGFVPT 194
           N + P  + T
Sbjct: 167 NAILPVTLDT 176

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 68.9 bits (169), Expect = 8e-14
 Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 46/272 (16%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +V +V  +  GIG  IA R+G  G  V+++   ++N++ A   L+  G +V      VS+
Sbjct: 3   EVVVVIGAG-GIGQAIARRVGA-GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            +  K L   T +  G +  +V  A  +PS  S     E++L     +++  + L+L++ 
Sbjct: 61  RESVKALA-ATAQTLGPVTGLVHTAGVSPSQASP----EAILK----VDLYGTALVLEEF 111

Query: 133 APHLQKGSSVVLISSIAGY---------------------------QPQS---SMAMYGV 162
              +  G + V+I+S +G+                           QP +   S+  Y +
Sbjct: 112 GKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQI 171

Query: 163 TKTA-LLGLTKALAAEMAPDTRVNCVAPGFVPTHFA--EYIT-SNDGVRQTIEQNTLLNR 218
            K A  L +            R+N ++PG + T  A  E      DG R    ++    R
Sbjct: 172 AKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA-GR 230

Query: 219 LGTTRDMAAAAAFLASDDASYITGETLVVAGG 250
            GT  ++AA A FL     S+ITG   +V GG
Sbjct: 231 PGTPDEIAALAEFLMGPRGSFITGSDFLVDGG 262

Length = 275

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 15/254 (5%)

Query: 6   MAKRFQGKVAIV--TASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARG 60
           M+    GK  +V   A+ + I +G A+ +  +GA+V+ +    R +K++ + V       
Sbjct: 1   MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLV------D 54

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKID-VVVSNAAANPS--VDSILQTKESVLDKL 117
            E + V C V++ +  +       E+ GKID +V + A A       ++  T        
Sbjct: 55  EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALA 114

Query: 118 WDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
            DI+  S I + + A P L  G+S+V ++     +   +  + G+ K AL    + LA +
Sbjct: 115 QDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARD 174

Query: 178 MAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
           +     RVN ++ G V T     I  +  + +  +  T+     T  ++   AAFL SD 
Sbjct: 175 LGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDL 234

Query: 237 ASYITGETLVVAGG 250
           ++ +TG+ + V  G
Sbjct: 235 STGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 67.8 bits (166), Expect = 2e-13
 Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 11/239 (4%)

Query: 19  ASTQGIGFGIAERLGLEGASVV---VSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           A+ + I +GIA+    +GA +    ++   +K V+    +L +  +        VS  + 
Sbjct: 14  ANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYV----YELDVSKPEH 69

Query: 76  RKNLINQTIEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDA 132
            K+L     +  GKID +V + A  P      S L+T +   +   +I+V S I L +  
Sbjct: 70  FKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRAL 129

Query: 133 APHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
            P L  G+SV+ +S + G +      + GV K AL    + LA ++     RVN ++ G 
Sbjct: 130 LPLLNDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGP 189

Query: 192 VPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGG 250
           + T  A  I     + +  E N  L +  +  ++  +  +L SD +S +TGE   V  G
Sbjct: 190 IKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAG 248

Length = 274

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 67.1 bits (164), Expect = 3e-13
 Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 30/192 (15%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK------ARGIEV 63
             GK   +T +++GIG  IA +   +GA+VV++++      E   KL       A  IE 
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTA----EPHPKLPGTIYTAAEEIEA 56

Query: 64  IG-----VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G      +  + +  Q +  + + +EKFG ID++V+NA+A  S+   L T     D + 
Sbjct: 57  AGGKALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASA-ISLTGTLDTPMKRYDLMM 115

Query: 119 DINVKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQ-------SSMAMYGVTKTALLG 169
            +N + + L  +   P+L+K  +  ++ +S      P+        +MA YG++   L  
Sbjct: 116 GVNTRGTYLCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVL-- 173

Query: 170 LTKALAAEMAPD 181
               +A E  P 
Sbjct: 174 ---GMAEEFKPG 182

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 66.7 bits (163), Expect = 7e-13
 Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 23/210 (10%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M     G V ++T ++ GIG   AE     GA +V+++R ++ +     + +A G EV+ 
Sbjct: 1   MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLV 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDINV 122
           V   V++  Q K L  Q     G+IDV V+N    A     ++ ++  E V        +
Sbjct: 61  VPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQV--------I 112

Query: 123 KSSIL-LLQDA---APHLQKGSSVVLIS--SIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
           +++++  ++DA    P  +K    + I+  S+ G+  Q   A Y  +K  L G ++AL  
Sbjct: 113 QTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRG 172

Query: 177 EMA--PDTRVNCVAPGFVPT----HFAEYI 200
           E+A  PD  V  V P F+ T    H A Y 
Sbjct: 173 ELADHPDIHVCDVYPAFMDTPGFRHGANYT 202

Length = 330

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 65.8 bits (161), Expect = 1e-12
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 22/196 (11%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           Q KVA+VT ++ GIG   A RL  +G +V  ++R+     + +  L + G+  + +   V
Sbjct: 2   QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRV----DKMEDLASLGVHPLSL--DV 55

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV-LD---KLWDINVKSSI 126
           ++    K  ++  I + G+IDV+V+NA    S  +I    E V +D   + +++N+  + 
Sbjct: 56  TDEASIKAAVDTIIAEEGRIDVLVNNAGYG-SYGAI----EDVPIDEARRQFEVNLFGAA 110

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAG--YQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
            L Q   PH+  Q+   ++ ISS+ G  Y P    A Y  TK AL G + AL  E+AP  
Sbjct: 111 RLTQLVLPHMRAQRSGRIINISSMGGKIYTPLG--AWYHATKFALEGFSDALRLEVAPFG 168

Query: 182 TRVNCVAPGFVPTHFA 197
             V  + PG + T + 
Sbjct: 169 IDVVVIEPGGIKTEWG 184

Length = 273

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 65.3 bits (160), Expect = 1e-12
 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 15/189 (7%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
            +GKV +VT + +GIG    E+L   GA+ V  ++R      E+V  L  R   V+ +  
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD----PESVTDLGPR---VVPLQL 56

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V++       +    E    + ++V+NA    +   +L+  E  L    + N    + +
Sbjct: 57  DVTDPAS----VAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAM 112

Query: 129 LQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
            +  AP L    G ++V + S+  +    ++  Y  +K A   LT+AL AE+AP  TRV 
Sbjct: 113 ARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVL 172

Query: 186 CVAPGFVPT 194
            V PG + T
Sbjct: 173 GVHPGPIDT 181

Length = 238

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 65.0 bits (158), Expect = 1e-12
 Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 18/214 (8%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGV 66
                K  +VT ++QG+G  +A+     GA+V++ +R QK +++    + +A   E   +
Sbjct: 2   ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAI 61

Query: 67  VCHVSNGQQRK-NLINQTIEK--FGKIDVVVSNA----AANPSVDSILQTKESVLDKLWD 119
              + + ++++      TI +   GK+D +V  A    A +P      QT    +++ + 
Sbjct: 62  RFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDF---QTVAEWVNQ-YR 117

Query: 120 INVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           IN  + + L +   P L++   +SV+ +    G  P++    +G +K AL  L K  A E
Sbjct: 118 INTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADE 177

Query: 178 --MAPDTRVNCVAPGFVPTHFAEYITSNDGVRQT 209
                + R N + PG  P +  + I S+ G  ++
Sbjct: 178 WERFGNLRANVLVPG--PINSPQRIKSHPGEAKS 209

Length = 239

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 65.1 bits (159), Expect = 1e-12
 Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE-AVVKLKARGIEVIGVVCHVSN 72
           VA V  +  G+G  IA R   EG SV +++R++  ++   V  ++  G     V     +
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
             +   L +   E+ G ++V+V NA AN     IL+T   V +K+W++      L  ++A
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAGAN-VWFPILETTPRVFEKVWEMAAFGGFLAAREA 119

Query: 133 APH-LQKGSSVVLI----SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           A   L +G   ++     +S+ G    ++ A     K AL  L +++A E+ P
Sbjct: 120 AKRMLARGRGTIIFTGATASLRGRAGFAAFAG---AKFALRALAQSMARELGP 169

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 64.8 bits (158), Expect = 2e-12
 Identities = 58/261 (22%), Positives = 100/261 (38%), Gaps = 28/261 (10%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVV----SSRKQKNVDEAVVKLKARGIEVIGV 66
             +VA+V    Q +G  +   L   G  V V    S   +K  DE   +    G +  G 
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEY---GEKAYGF 57

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVK 123
               +N Q    L     E F ++D++V +A    +    D  L   +  L     +N+ 
Sbjct: 58  GADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQ----VNLV 113

Query: 124 SSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
              L  ++ +  + +      ++ I+S +G       + Y   K   +GLT++LA ++A 
Sbjct: 114 GYFLCAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAE 173

Query: 181 -DTRVNCVAPG----------FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA 229
               VN +  G           +P +  +       V Q       L R    +D+    
Sbjct: 174 HGITVNSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQDVLNML 233

Query: 230 AFLASDDASYITGETLVVAGG 250
            F AS  ASY TG+++ + GG
Sbjct: 234 LFYASPKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 4e-12
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV-CHV 70
            K   +T ++ G G G+ ERL   G  V  + R+   +D+    LKAR  + + V+   V
Sbjct: 2   SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD----LKARYGDRLWVLQLDV 57

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNA------AANPSVDSILQTKESVLDKLWDINVKS 124
           ++    + ++++     G+IDVVVSNA      AA    D+        + +  D N+  
Sbjct: 58  TDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDA-------QIRRQIDTNLIG 110

Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-D 181
           SI +++ A PHL  Q G  +V +SS  G       ++Y  TK  + G  +A+A E+AP  
Sbjct: 111 SIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFG 170

Query: 182 TRVNCVAPGFVPTHFA 197
                V PG   T+F 
Sbjct: 171 IEFTIVEPGPARTNFG 186

Length = 276

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 4e-12
 Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 9/190 (4%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHV 70
            KV  +T +++G G    E     G  VV ++R    + +    L  + G  ++ +   V
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLAD----LAEKYGDRLLPLALDV 58

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++       +   +E FG++D+VV+NA        I +  ES      D N   ++ + Q
Sbjct: 59  TDRAAVFAAVETAVEHFGRLDIVVNNAGYG-LFGMIEEVTESEARAQIDTNFFGALWVTQ 117

Query: 131 DAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
              P+L  Q+   ++ ISSI G        +Y  +K AL G+++ALA E+A    +V  V
Sbjct: 118 AVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLV 177

Query: 188 APGFVPTHFA 197
            PG   T +A
Sbjct: 178 EPGGYSTDWA 187

Length = 275

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 64.6 bits (158), Expect = 4e-12
 Identities = 38/179 (21%), Positives = 80/179 (44%), Gaps = 11/179 (6%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M K    +V ++T ++ G+G   A      GA VV+ +R ++ ++    +++A G E + 
Sbjct: 2   MLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALA 61

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV----LDKLWDIN 121
           VV  V++ +  +   ++  E+ G ID  V+NA       ++    E V      ++ ++ 
Sbjct: 62  VVADVADAEAVQAAADRAEEELGPIDTWVNNAMV-----TVFGPFEDVTPEEFRRVTEVT 116

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
               +     A  H+  +   +++ + S   Y+     + Y   K A+ G T +L  E+
Sbjct: 117 YLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCEL 175

Length = 334

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 5e-12
 Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 14/180 (7%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
              GK  ++T ++ GIG   AE+    GA+VV  +R++  +D    ++   G + + V C
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPC 96

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI------NV 122
            +S+      L+    ++ G +D++++NA       SI +     LD+  D+      N 
Sbjct: 97  DLSDLDAVDALVADVEKRIGGVDILINNAGR-----SIRRPLAESLDRWHDVERTMVLNY 151

Query: 123 KSSILLLQDAAPH-LQKGSSVVLISSIAGYQPQSS--MAMYGVTKTALLGLTKALAAEMA 179
            + + L++  AP  L++G   ++  +  G   ++S   ++Y  +K AL  +++ +  E  
Sbjct: 152 YAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWG 211

Length = 293

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 64.6 bits (158), Expect = 7e-12
 Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 13/178 (7%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKV ++T ++ GIG   A ++   GA+V + +R  + +DE V +++A+G       C ++
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLT 430

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD------INVKSS 125
           +     + +   + + G +D +V+NA       SI ++ E+  D+  D      +N   +
Sbjct: 431 DSAAVDHTVKDILAEHGHVDYLVNNAGR-----SIRRSVENSTDRFHDYERTMAVNYFGA 485

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           + L+    PH+  ++   VV +SSI         + Y  +K AL   +   A+E   D
Sbjct: 486 VRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLSD 543

Length = 657

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 63.5 bits (155), Expect = 7e-12
 Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 3/172 (1%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
            GKV +VT + +GIG  +A RL   GA + +   ++  +     +L      V+ VV  V
Sbjct: 8   AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAEL-GGDDRVLTVVADV 66

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++    +    + +E+FG IDVVV+NA       S+ Q       ++ D+N+      ++
Sbjct: 67  TDLAAMQAAAEEAVERFGGIDVVVANAGIASG-GSVAQVDPDAFRRVIDVNLLGVFHTVR 125

Query: 131 DAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
              P L ++   V+ +SS+A +     MA Y  +K  +     AL  E+A  
Sbjct: 126 ATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHH 177

Length = 296

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 74/283 (26%), Positives = 112/283 (39%), Gaps = 48/283 (16%)

Query: 12  GKVAIVT--ASTQGIGFGIAERLGLEGASVVV--------------------SSRKQKNV 49
           GK+A +      QG G+GIA+ L   GA+++V                    +SRK  N 
Sbjct: 8   GKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNG 67

Query: 50  D----EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK--------FGKIDVVVSNA 97
                  +  + A       V   +   ++ K+L   TI +        FG ID++V + 
Sbjct: 68  SLLTFAKIYPMDASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSL 127

Query: 98  AANPSV-DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA------G 150
           A +P +   +L+T           +  S + LL    P +  G S + ++ +A      G
Sbjct: 128 ANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAVPG 187

Query: 151 YQPQSSMAMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAEYITSNDGVRQ 208
           Y    S A     K AL   TK LA E       RVN ++ G + +   + I   + +  
Sbjct: 188 YGGGMSSA-----KAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVD 242

Query: 209 TIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
             +    L        + AAAAFL S  AS ITGETL V  G 
Sbjct: 243 YYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA 285

Length = 299

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 12/139 (8%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVCHV 70
           GK A+VT S++GIG   A+ L   GA VVV+ R++      VV  ++A G     V   +
Sbjct: 6   GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADL 65

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW--DINVKSSILL 128
           ++ +    L++   E+FG +D +V NA+            ES +D+ +   +N  +   L
Sbjct: 66  TDEESVAALMDTAREEFGGLDALVLNASGGM---------ESGMDEDYAMRLNRDAQRNL 116

Query: 129 LQDAAPHLQKGSSVVLISS 147
            + A P +  GS VV ++S
Sbjct: 117 ARAALPLMPAGSRVVFVTS 135

Length = 248

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 9e-11
 Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 21/189 (11%)

Query: 17  VTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH---VSNG 73
           +T +  GIG   A     EG  V        +++EA +   A  +           V++ 
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAY-----DINEAGLAALAAELGAGNAWTGALDVTDR 60

Query: 74  QQRKNLINQTIEKF-----GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
                  +  +  F     G++DV+ +NA             E+  D++ DINVK  +  
Sbjct: 61  AA----WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAH-DRVIDINVKGVLNG 115

Query: 129 LQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
              A P+L+   G+ V+  SS +    Q  +A+Y  TK A+ GLT+AL  E      RV 
Sbjct: 116 AHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVA 175

Query: 186 CVAPGFVPT 194
            V P FV T
Sbjct: 176 DVMPLFVDT 184

Length = 260

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 9e-11
 Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 29/157 (18%)

Query: 128 LLQDAAPHLQKGSSVVLISSIAGYQ---------------------------PQSSMAMY 160
           L +   P +  G ++V ++S+AG +                           P +    Y
Sbjct: 78  LTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGY 137

Query: 161 GVTKTALL--GLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNR 218
            ++K AL+   + +A     A   RVNCVAPG V T       S  G  +       + R
Sbjct: 138 QLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGR 197

Query: 219 LGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSRL 255
             T  + AA   FL SD A +I G  L V GG+ +  
Sbjct: 198 PATADEQAAVLVFLCSDAARWINGVNLPVDGGLAATY 234

Length = 241

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 24/193 (12%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
             + K  ++T ++ GIG  +AE L   GA +++  R      E +  L AR         
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA----EKLEALAARLPYPGRHRW 57

Query: 69  HVSN--GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
            V++   +  +  +     + G I+V+++NA  N     +       +++L  +N+ + +
Sbjct: 58  VVADLTSEAGREAVLARAREMGGINVLINNAGVN-HFALLEDQDPEAIERLLALNLTAPM 116

Query: 127 LLLQDAAPHLQKGSS--VVLISSI------AGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
            L +   P L+   S  VV + S        GY      A Y  +K AL G ++AL  E+
Sbjct: 117 QLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGY------ASYCASKFALRGFSEALRREL 170

Query: 179 APDTRVNC--VAP 189
           A DT V    +AP
Sbjct: 171 A-DTGVRVLYLAP 182

Length = 263

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 58.6 bits (142), Expect = 3e-10
 Identities = 67/253 (26%), Positives = 109/253 (43%), Gaps = 21/253 (8%)

Query: 11  QGKVAIV--TASTQGIGFGIAERLGLEGASVVVSSRK---QKNVDEAVVKLKARGIEVIG 65
            GK  ++   A+ + I +GIA+     GA +  + +    +K V+    +L   G  V G
Sbjct: 9   AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL---GAFVAG 65

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSI----LQTKESVLDKLWDIN 121
             C V++      +     +K+GK+D VV +A      D +    + T         DI+
Sbjct: 66  H-CDVTDEASIDAVFETLEKKWGKLDFVV-HAIGFSDKDELTGRYVDTSRDNFTMTMDIS 123

Query: 122 VKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALAAEM 178
           V S   + Q A   +  G S++ ++    Y  +  M  Y   GV K AL    K LA ++
Sbjct: 124 VYSFTAVAQRAEKLMTDGGSILTLTY---YGAEKVMPHYNVMGVAKAALEASVKYLAVDL 180

Query: 179 APD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
            P   RVN ++ G + T  A  I     + +  E N  L R  T  ++  +A +L SD +
Sbjct: 181 GPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLS 240

Query: 238 SYITGETLVVAGG 250
             +TGE   V  G
Sbjct: 241 RGVTGEVHHVDSG 253

Length = 272

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 58.0 bits (141), Expect = 4e-10
 Identities = 56/246 (22%), Positives = 96/246 (39%), Gaps = 30/246 (12%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           ++T + Q IG  +A  L  +G  V+VS R       A+  L+  G     +    S    
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQPVIVSYRTHY---PAIDGLRQAG--AQCIQADFSTNAG 60

Query: 76  RKNLINQTIEKFGKIDVVVSNAAA----NPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
               I++  +    +  ++ NA+      P           VL ++  I+V +  LL   
Sbjct: 61  IMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPL-----ADVLARMMQIHVNAPYLLNLA 115

Query: 132 AAPHLQKG----SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
               L+      S ++ I+     +       Y  +K AL  +T + AA++AP+ +VN +
Sbjct: 116 LEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSI 175

Query: 188 APG---FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           AP    F     A Y       RQ     +LL       ++     +L    + Y+TG +
Sbjct: 176 APALILFNEGDDAAY-------RQKALAKSLLKIEPGEEEIIDLVDYLL--TSCYVTGRS 226

Query: 245 LVVAGG 250
           L V GG
Sbjct: 227 LPVDGG 232

Length = 236

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 12/176 (6%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSR---KQKNVDEAVVKLKARG-IEVIGVV 67
            K+AIVT ++ G G      L  +G  V+ + R   KQ+N+     +L  +  I+V  + 
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQL- 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSI 126
             V++     N     +++ G+ID++V+NA  AN      +  +E    K ++ NV  +I
Sbjct: 62  -DVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEE--YRKQFETNVFGAI 117

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            + Q   P++  QK   ++ ISSI+G      ++ Y  +K AL G +++L  E+ P
Sbjct: 118 SVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKP 173

Length = 280

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 57.6 bits (139), Expect = 7e-10
 Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 20/252 (7%)

Query: 12  GKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQK---NVDEAVVKLKARGIEVIGV 66
           GK  +VT  AS   I +GIA+ +  EGA +  + +  K    V+E   +L +     I +
Sbjct: 6   GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSD----IVL 61

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPS-------VDSILQTKESVLDKLWD 119
            C V+       +  +  + + K D  V +    P        V+++  T+E       D
Sbjct: 62  PCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAV--TREG-FKIAHD 118

Query: 120 INVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           I+  S + + +     L  GS+++ +S +   +   +  + G+ K +L    + +A  M 
Sbjct: 119 ISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG 178

Query: 180 PD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
           P+  RVN ++ G + T  A  I     +    E  T + R  T  D+  +AAFL SD ++
Sbjct: 179 PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA 238

Query: 239 YITGETLVVAGG 250
            I+GE + V GG
Sbjct: 239 GISGEVVHVDGG 250

Length = 262

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 57.3 bits (138), Expect = 9e-10
 Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 9/249 (3%)

Query: 10  FQGKVAIVTA--STQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            QGK  ++T   S + I +GIA+    +GA +  +    K ++E V K+ A     +   
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELDSELVFR 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANP----SVDSILQTKESVLDKLWDINVK 123
           C V++  +   +     + +  +D +V +    P    S D +        +   +I+  
Sbjct: 63  CDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAY 122

Query: 124 SSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
           S   L + A P ++ + S++V +S +   +   +  + G+ K +L    +  AA +  + 
Sbjct: 123 SLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEG 182

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            R N ++ G + T  A  I     +   +  +  L R  T  ++   AAFL SD +S IT
Sbjct: 183 IRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGIT 242

Query: 242 GETLVVAGG 250
           GE   V GG
Sbjct: 243 GEITYVDGG 251

Length = 261

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 56.0 bits (136), Expect = 2e-09
 Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 16/191 (8%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG----- 65
           + ++ +VT +  GIG   A      GA+V++  R ++ + EAV       IE  G     
Sbjct: 11  KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKL-EAV----YDEIEAAGGPQPA 65

Query: 66  -VVCHVSNG--QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            +   +     Q  + L +   E+FG++D V+ NA     +  + Q    V   +  +NV
Sbjct: 66  IIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNV 125

Query: 123 KSSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            ++ +L Q   P L K   +S+V  SS  G Q +++   Y V+K A  G+ + LA E   
Sbjct: 126 NATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQG 185

Query: 181 DT-RVNCVAPG 190
              RVNC+ PG
Sbjct: 186 TNLRVNCINPG 196

Length = 247

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 55.2 bits (133), Expect = 5e-09
 Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 15/190 (7%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
            V ++T  + GIG  +A+     G  V  ++RK ++V+     L A G     V   V++
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA----LAAAGF--TAVQLDVND 55

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           G     L  +   + G +DV+++NA   A  P +D  ++     + + ++ NV + + + 
Sbjct: 56  GAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEA----MRRQFETNVFAVVGVT 111

Query: 130 QDAAPHLQKGSSVVL-ISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
           +   P L++   +V+ I S++G         Y  +K A+  L+ AL  E+AP   +V  V
Sbjct: 112 RALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEV 171

Query: 188 APGFVPTHFA 197
            PG + + FA
Sbjct: 172 QPGAIASQFA 181

Length = 274

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 65/261 (24%), Positives = 108/261 (41%), Gaps = 39/261 (14%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVV-KLKARGIEVIGVVC 68
           GKVA+VT +    G G AE LGL   GA+VVV+          V+ +++A G + + V  
Sbjct: 12  GKVAVVTGA--AAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD----INVKS 124
            +S       L+   +   G +D+VV+NA    + D +L    ++ D+ WD    ++++ 
Sbjct: 70  DISQRATADELVATAVG-LGGLDIVVNNAGI--TRDRMLF---NMSDEEWDAVIAVHLRG 123

Query: 125 SILLLQDAAPHLQKGSS---------VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
             LL ++AA + +  +          +V  SS AG       A YG  K  +  LT + A
Sbjct: 124 HFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAA 183

Query: 176 AEMAP-DTRVNCVAP----GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAA 230
             +     R N + P          F +      G    +          +   +     
Sbjct: 184 RALGRYGVRANAICPRARTAMTADVFGDAPDVEAGGIDPL----------SPEHVVPLVQ 233

Query: 231 FLASDDASYITGETLVVAGGM 251
           FLAS  A+ + G+  +V G M
Sbjct: 234 FLASPAAAEVNGQVFIVYGPM 254

Length = 306

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 21/188 (11%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-ARGIEVIGVVCHVS 71
             A++T +++GIG  IA  L     ++++  R  + +DE   +L  A    V        
Sbjct: 4   PTALITGASRGIGAAIAREL-APTHTLLLGGRPAERLDELAAELPGATPFPVDLT----- 57

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW----DINVKSSIL 127
                   I   +E+ G++DV+V NA       + L          W    ++NV +   
Sbjct: 58  ----DPEAIAAAVEQLGRLDVLVHNAGV-----ADLGPVAESTVDEWRATLEVNVVAPAE 108

Query: 128 LLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
           L +   P L+     VV I+S AG +       Y  +K AL  L  AL  E   + RV  
Sbjct: 109 LTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGNVRVTS 168

Query: 187 VAPGFVPT 194
           V PG   T
Sbjct: 169 VHPGRTDT 176

Length = 227

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 52.1 bits (125), Expect = 4e-08
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 115 DKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK 172
           D++ DINVK  +     A P+L+   G+ V+  +S +    Q  +A+Y  TK A+ GLT+
Sbjct: 101 DRMVDINVKGVLNGAYAALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTE 160

Query: 173 ALAAEMAP-DTRVNCVAPGFVPT 194
           AL  E A    RV  V P FV T
Sbjct: 161 ALDVEWARHGIRVADVWPWFVDT 183

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 10/189 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI-GVVCHVS 71
           K   VT +  GIG   A RL  +GA + ++ R    + + V   +A G  V       +S
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNA--AANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +               G +DVV++ A  +A  +VD +   +     ++ D+N+   I ++
Sbjct: 61  DYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWR---RMVDVNLMGPIHVI 117

Query: 130 QDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
           +   P +    +G  +V +SS AG       A Y  +K  L GL++ L  ++A     V+
Sbjct: 118 ETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVS 177

Query: 186 CVAPGFVPT 194
            V PG V T
Sbjct: 178 VVVPGAVKT 186

Length = 272

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 50.8 bits (121), Expect = 1e-07
 Identities = 66/252 (26%), Positives = 106/252 (42%), Gaps = 17/252 (6%)

Query: 10  FQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            QGK  ++T  A+   I + IA+     GA +  +   Q  V E  VK  A  I    V 
Sbjct: 6   LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTY--QSEVLEKRVKPLAEEIGCNFVS 63

Query: 68  -CHVSNGQQRKNLINQTIEKFGKIDVVV-------SNAAANPSVDSILQTKESVLDKLWD 119
              V+N +   NL +   EK+G  D ++        N      VD+ L+   + L     
Sbjct: 64  ELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLH---- 119

Query: 120 INVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           I+  S + L + A   +  G S+V ++     +   +  + GV K AL    K LA +M 
Sbjct: 120 ISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMG 179

Query: 180 PDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
            +  RVN ++ G + T  +  I     + ++      L R  T  D+  AA +L S+ + 
Sbjct: 180 ENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSK 239

Query: 239 YITGETLVVAGG 250
            +TGE   V  G
Sbjct: 240 GVTGEIHYVDCG 251

Length = 260

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 8/184 (4%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
           A+V  ++ GIG   A  L   G  V + +R+ +  +E V K++A G E +     V++  
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD 72

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
             K+ + Q  E  G+I+V+VS  A +     + +      +    I++  +  L     P
Sbjct: 73  SVKSFVAQAEEALGEIEVLVS-GAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP 131

Query: 135 HL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM-APDTRVNCVAPG 190
            +   ++G  ++ + S    + +  M  YG  K  L  +   L  E+     R + V PG
Sbjct: 132 GMIERRRGD-LIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPG 190

Query: 191 FVPT 194
             PT
Sbjct: 191 --PT 192

Length = 274

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 47/239 (19%), Positives = 84/239 (35%), Gaps = 58/239 (24%)

Query: 13  KVAIVTASTQGIGFGIAERL-----GLEGASVVVSSRKQKNVDEAVVKLKA----RGIEV 63
           KV +VT +  G+G  I ERL          +++++ R  +  + A   L A      +  
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAA--NPSVDSILQTKESVLDKL---- 117
             V+  +SN         +  +++ ++D +  NA    NP +D I   KE + + L    
Sbjct: 62  DYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVT 121

Query: 118 --------------------------WDINVKSSILLLQDAAPHL---QKGSSVVLISSI 148
                                     +  NV     L+++  P L     GS ++  SS+
Sbjct: 122 NPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWTSSL 181

Query: 149 AG---------YQPQSSMAMYGVTKTALLGLTKAL---AAEMAPDTRVNCVAPGFVPTH 195
                       Q     A Y  +K  +  L+ AL     ++   + V    PG   T+
Sbjct: 182 NASPKYFSLEDIQHLKGPAPYSSSKYLVDLLSLALNRKFNKLGVYSYVVH--PGICTTN 238

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 25/220 (11%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR---KQKNVDEAVVKLKARGI 61
           K  K++ G  A+VT  T GIG G A +L  +G ++V+ +R   K K+V ++ ++ K    
Sbjct: 47  KNLKKY-GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS-IQSKYSKT 104

Query: 62  EVIGVVC----HVSNGQQRKNLINQTIEKFGKIDVVVSNAAAN-PSVDSILQTKESVLDK 116
           ++  VV      +  G +R   I +TIE    + V+++N   + P      +  E +L  
Sbjct: 105 QIKTVVVDFSGDIDEGVKR---IKETIEGL-DVGVLINNVGVSYPYARFFHEVDEELLKN 160

Query: 117 LWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSM-AMYGVTKTALLGLTK 172
           L  +NV+ +  + Q   P +   +KG+ + + S  A   P   + A+Y  TK  +   ++
Sbjct: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSR 220

Query: 173 ALAAEMAPD-TRVNCVAPGFVPTHFAE------YITSNDG 205
            L  E       V C  P +V T  A        + S+DG
Sbjct: 221 CLYVEYKKSGIDVQCQVPLYVATKMASIRRSSFLVPSSDG 260

Length = 320

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 16/187 (8%)

Query: 17  VTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQR 76
           +T S+ G+G   A  L  +G  VV+ +R QK   +A          +IG    +S+  + 
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAACPGAAGVLIG---DLSSLAET 68

Query: 77  KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL-------- 128
           + L +Q +   G+ D V+ NA    S  +       +   +  +NV +  +L        
Sbjct: 69  RKLADQ-VNAIGRFDAVIHNAGIL-SGPNRKTPDTGI-PAMVAVNVLAPYVLTALIRRPK 125

Query: 129 -LQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
            L   +  + +G +  L       + ++    Y  +K  +L L  A+A     D   N V
Sbjct: 126 RLIYLSSGMHRGGNASLDDIDWFNRGENDSPAYSDSKLHVLTLAAAVA-RRWKDVSSNAV 184

Query: 188 APGFVPT 194
            PG+VPT
Sbjct: 185 HPGWVPT 191

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 24/254 (9%)

Query: 12  GKVAIVTA--STQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           GK  ++T   S + I +GIA+    EGA +  +    +  D         G +++   C 
Sbjct: 6   GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLV-FPCD 64

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV----LDKL-------- 117
           V++ +Q   L     + +  +D +V +    P        +E++    LD L        
Sbjct: 65  VASDEQIDALFASLGQHWDGLDGLVHSIGFAP--------REAIAGDFLDGLSRENFRIA 116

Query: 118 WDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
            DI+  S   L + A P L   +S++ +S +   +   +    G+ K +L    + LA  
Sbjct: 117 HDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVS 176

Query: 178 MAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
           + P   R N ++ G + T  A  I     +   +E N  L R  T  ++   AAFL SD 
Sbjct: 177 LGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDL 236

Query: 237 ASYITGETLVVAGG 250
           AS +TGE   V  G
Sbjct: 237 ASGVTGEITHVDSG 250

Length = 260

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 6e-06
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 16/104 (15%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR----KQKNVD---------EA 52
           M K  +GKVA+V  +T+G G GIA  LG  GA+V V+ R    ++   D         E 
Sbjct: 2   MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAEL 61

Query: 53  VVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSN 96
           V     RGI V   V H    +Q + L+ +   + G++D++V++
Sbjct: 62  VTAAGGRGIAV--QVDH-LVPEQVRALVERIDREQGRLDILVND 102

Length = 305

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 8e-06
 Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 16/193 (8%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            K  ++T +  G G  +A RL  +G +V+   +    V     +   RG+ +      ++
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLT 61

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDINVKSSILL 128
           +   R             +DV+++NA    A   VD  ++    ++ +L++ NV   + L
Sbjct: 62  DAIDRAQAAEW------DVDVLLNNAGIGEAGAVVDIPVE----LVRELFETNVFGPLEL 111

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
            Q     +  +    VV  SS+AG         Y  +K AL  + +A+ AE+ P   +V 
Sbjct: 112 TQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVA 171

Query: 186 CVAPGFVPTHFAE 198
            V PG   T F +
Sbjct: 172 TVNPGPYLTGFND 184

Length = 257

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 14/174 (8%)

Query: 87  FGKIDVVVSNAAANPSV-DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI 145
           FG ID++V + A  P V   +L+T           +  S + LLQ   P +  G + + +
Sbjct: 118 FGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISL 177

Query: 146 SSIA------GYQPQSSMAMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFA 197
           + IA      GY    S A     K AL   T+ LA E       RVN ++ G + +  A
Sbjct: 178 TYIASERIIPGYGGGMSSA-----KAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAA 232

Query: 198 EYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
           + I   D + +    N  L +  T  ++  AAAFLAS  AS ITG T+ V  G+
Sbjct: 233 KAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGL 286

Length = 303

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 13/184 (7%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
             ++T +T GIG  +A     +G  V+   R Q  +DE   +  +  I  +     V++ 
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ--SANIFTLAF--DVTDH 58

Query: 74  QQRKNLINQTIEKFGKI-DVVVSNAAANPSVDS-ILQTKESVLDKLWDINVKSSILLLQD 131
              K      + +   I ++ + NA     +D   +     ++ +++++NV      ++ 
Sbjct: 59  PGTK----AALSQLPFIPELWIFNAGDCEYMDDGKVDAT--LMARVFNVNVLGVANCIEG 112

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPG 190
             PHL  G  VV++ SIA          YG +K A+    + L  ++ P    V  V PG
Sbjct: 113 IQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPG 172

Query: 191 FVPT 194
           FV T
Sbjct: 173 FVAT 176

Length = 240

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 16/196 (8%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGAS---VVVSSR---KQKNVDEAVVKLKARGIEVIGV 66
            V ++T  + GIG  +A RL  + +    V  + R   K+  + EA   L    +E + +
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 67  -VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
            VC   +       +         +DV+V NA     +  +    E  +  ++D+NV  +
Sbjct: 61  DVCDSKSVAAAVERV-----TERHVDVLVCNAGVG-LLGPLEALSEDAMASVFDVNVFGT 114

Query: 126 ILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
           + +LQ   P +++  S  +++ SS+ G Q      +Y  +K AL GL ++LA ++ P + 
Sbjct: 115 VRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNV 174

Query: 183 RVNCVAPGFVPTHFAE 198
            ++ +  G V T F E
Sbjct: 175 HLSLIECGPVHTAFME 190

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 6/148 (4%)

Query: 89  KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSS--VVLIS 146
           + DVVV + AA      ++    S +++    NV  +  LL+ A   ++       +LIS
Sbjct: 31  RRDVVV-HNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILIS 89

Query: 147 SIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAEYITSNDG 205
           S+AG      +  Y  +K AL GL +  A+E   +      VA G               
Sbjct: 90  SVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSGMA--KGPVA 147

Query: 206 VRQTIEQNTLLNRLGTTRDMAAAAAFLA 233
             + +       R     ++A A     
Sbjct: 148 PEEILGNRRHGVRTMPPEEVARALLNAL 175

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 14/187 (7%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
             I+ AS +G+G G+ +RL   G  V  + R  +  D A+  L    IE + +    S  
Sbjct: 4   ALIIGAS-RGLGLGLVDRLLERGWQVTATVRGPQQ-DTALQALPGVHIEKLDMNDPASLD 61

Query: 74  QQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
           Q  + L  Q        D++  NA  + P+  S      + + +L+  N  + I L +  
Sbjct: 62  QLLQRLQGQR------FDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRL 115

Query: 133 APHLQKGSSVV-LISSIAG---YQPQSSMAMYGVTKTALLGLTKALAAEMA-PDTRVNCV 187
              ++ G  V+  +SS  G         M +Y  +K AL  +T++  AE+  P   V  +
Sbjct: 116 LGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSM 175

Query: 188 APGFVPT 194
            PG+V T
Sbjct: 176 HPGWVKT 182

Length = 225

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 40/204 (19%), Positives = 87/204 (42%), Gaps = 20/204 (9%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVV-VSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           +  I+T ++QG+G  IA +L  +G  V+ +S  + K + +     +     +      + 
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA---EQYNSNLTFHSLDLQ 58

Query: 72  NGQQRKNLINQTIEKFGKIDV----VVSNAAANPSVDSILQTKESVLDKL---WDINVKS 124
           +  + +   N+ +    + +V    +++NA     V  I   +++  ++L     +N+ +
Sbjct: 59  DVHELETNFNEILSSIQEDNVSSIHLINNAGM---VAPIKPIEKAESEELITNVHLNLLA 115

Query: 125 SILLLQDAAPHLQ--KGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            ++L      H +  K    V+ ISS A   P    + Y  +K  L   T+ +A E   +
Sbjct: 116 PMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEE 175

Query: 182 T---RVNCVAPGFVPTHFAEYITS 202
               ++   +PG + T+    I S
Sbjct: 176 EYPVKIVAFSPGVMDTNMQAQIRS 199

Length = 251

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 43.4 bits (102), Expect = 4e-05
 Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 21/200 (10%)

Query: 14  VAIVTASTQGIGFGIAE----RLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVV 67
           V +VT +++G G  IA+     L   G+ +V+S+R  + + +   ++ A   G+ V+ V 
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKID----VVVSNAAANPSV----DSILQTKESVLDKLWD 119
             +      + L+    E          ++++NA     V      +  + +  +   W 
Sbjct: 62  LDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQ--VQNYWA 119

Query: 120 INVKSSILLLQDAAPHLQKGSS----VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
           +N+ S + L        +        VV ISS+   QP    A+Y   K A   L + LA
Sbjct: 120 LNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLA 179

Query: 176 AE-MAPDTRVNCVAPGFVPT 194
            E   P+ RV   APG + T
Sbjct: 180 LEEKNPNVRVLNYAPGVLDT 199

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 5/109 (4%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           KMK+A    GKVAIVT    GIG   A  L  +GA V+V+   Q++    V ++   G E
Sbjct: 11  KMKLA----GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGE 66

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKE 111
            + V   +      + +I+ T+  F +ID++  NA     +DSI   ++
Sbjct: 67  ALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLY-KIDSIFSRQQ 114

Length = 169

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 31/236 (13%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSN 72
           + +VT +T G G  I  R   +G  V+ + R+Q+ + E    LK   G  +      V N
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQE----LKDELGDNLYIAQLDVRN 57

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNA--------AANPSVDSILQTKESVLDKLWDINVKS 124
               + ++     ++  IDV+V+NA        A   SV+          + + D N K 
Sbjct: 58  RAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVED--------WETMIDTNNKG 109

Query: 125 SILLLQDAAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM-APD 181
            + + +   P + + +   ++ I S AG  P +   +YG TK  +   +  L  ++    
Sbjct: 110 LVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTA 169

Query: 182 TRVNCVAPGFVP-THFA--EYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
            RV  + PG V  T F+   +   +    +T +    L    T  D++ A  ++A+
Sbjct: 170 VRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVAL----TPEDVSEAVWWVAT 221

Length = 248

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 17/48 (35%), Positives = 28/48 (58%)

Query: 12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR 59
          GK A+VT ++ G+G G+A RL   GA V++  R +   + AV  ++  
Sbjct: 14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTA 61

Length = 313

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 39/182 (21%), Positives = 74/182 (40%), Gaps = 11/182 (6%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
           A++  +T GIG  +A  L   G  +++S R     D   +   A  +  +     V+   
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGR-----DAGALAGLAAEVGALARPADVAAEL 55

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
           +   L     ++ G +D++V  A A      + +TK +   ++ D N+  + L+L+ A  
Sbjct: 56  EVWALA----QELGPLDLLVYAAGAILG-KPLARTKPAAWRRILDANLTGAALVLKHALA 110

Query: 135 HLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPT 194
            L  G+ +V + +         ++ Y   K AL    +    E+    R+  V P  V T
Sbjct: 111 LLAAGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVR-GLRLTLVRPPAVDT 169

Query: 195 HF 196
             
Sbjct: 170 GL 171

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|236057 PRK07578, PRK07578, short chain dehydrogenase; Provisional

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 16/157 (10%)

Query: 52  AVVKLKARGIEVIGVVCHVSNGQQR-----KNLINQTIEKFGKIDVVVSNAAANPSVDSI 106
           AVV   ++  EVI      S+G  +        I    EK GK+D VVS AA       +
Sbjct: 15  AVVAELSKRHEVITA--GRSSGDVQVDITDPASIRALFEKVGKVDAVVS-AAGKVHFAPL 71

Query: 107 LQTKESVLDKLWDINVKSSIL----LLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV 162
            +  +      +++ ++S ++    L+     +L  G S  L S I   +P    A    
Sbjct: 72  AEMTDE----DFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAAT 127

Query: 163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEY 199
              AL G  KA A E+    R+N V+P  +     +Y
Sbjct: 128 VNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKY 164

Length = 199

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 10/93 (10%)

Query: 12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-----KARGIEVIGV 66
          GKV I+T +  GIGF  A    L GA V+++ R       AV ++     KAR +E + +
Sbjct: 1  GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKAR-VEAMTL 59

Query: 67 -VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA 98
           +  + + Q+              + V+V NAA
Sbjct: 60 DLASLRSVQRFAEAFKAKNS---PLHVLVCNAA 89

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 32/200 (16%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHV 70
           K+ I  AS+ G+G G+A     +G  + + +R+   ++E   +L AR  GI+V      V
Sbjct: 4   KILITGASS-GLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDV 62

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAA-------------ANPSVDSILQTKESVL-DK 116
           ++  Q   +  +  ++ G +D V+ NA              AN        T E+     
Sbjct: 63  NDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWAN------KATAETNFVAA 116

Query: 117 LWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-QSSMAMYGVTKTALLGLTKALA 175
           L        I   Q +  HL      VLISS++  +      A Y  +K  +  L + L 
Sbjct: 117 LAQCEAAMEIFREQGSG-HL------VLISSVSAVRGLPGVKAAYAASKAGVASLGEGLR 169

Query: 176 AEMA-PDTRVNCVAPGFVPT 194
           AE+A    +V+ + PG++ +
Sbjct: 170 AELAKTPIKVSTIEPGYIRS 189

Length = 248

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 15/149 (10%)

Query: 12  GKVAIVTASTQGIGFGIAERL-GLEGASVVVSSRKQKNVDE-----AVVKLKARGIEVIG 65
           G V +VT    GIG  +A  L    GA +V+  R     +E      +  L+A G  V+ 
Sbjct: 205 GGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLY 264

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   V++    + L+ +  E++G ID V+  A        + Q      + +    V   
Sbjct: 265 ISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRD-ALLAQKTAEDFEAVLAPKVDGL 323

Query: 126 ILLLQ---DAAPHLQKGSSVVLISSIAGY 151
           + L Q   D           VL SS++ +
Sbjct: 324 LNLAQALADEPLDF-----FVLFSSVSAF 347

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 7/187 (3%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHV 70
            KV I  AS+ GIG  +A     +GA++ + +R+   +     +L     + V      V
Sbjct: 3   LKVFITGASS-GIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAA--DV 59

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
            +           I   G  DVV++NA  +    +  +   +V  ++ D N    +   Q
Sbjct: 60  RDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQ 119

Query: 131 D--AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
              A     +  ++V I+S+AG +       Y  +K A +   ++L  E+ P   RV  +
Sbjct: 120 PFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTI 179

Query: 188 APGFVPT 194
           APG++ T
Sbjct: 180 APGYIRT 186

Length = 257

>gnl|CDD|135642 PRK05884, PRK05884, short chain dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 43/249 (17%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           +VT     +G  IAE    +G  V +   ++ +++ A     A+ ++V  +VC  ++   
Sbjct: 4   LVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVA-----AKELDVDAIVCDNTDPAS 58

Query: 76  RKNLINQTIEKFGKIDVVVSN---AAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            +            I V V      A +P   S+  T  +  + L D  V S++L +Q  
Sbjct: 59  LEEARGLFPHHLDTI-VNVPAPSWDAGDPRTYSLADTANAWRNAL-DATVLSAVLTVQSV 116

Query: 133 APHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR---VNCVAP 189
             HL+ G S+  IS +    P  S       K AL   T   AA     TR   +N VA 
Sbjct: 117 GDHLRSGGSI--ISVVPENPPAGSAE--AAIKAALSNWTAGQAAVFG--TRGITINAVAC 170

Query: 190 GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAA-----AAFLASDDASYITGET 244
           G                 ++++     + L  T    AA     A FL +  A +ITG+T
Sbjct: 171 G-----------------RSVQPG--YDGLSRTPPPVAAEIARLALFLTTPAARHITGQT 211

Query: 245 LVVAGGMPS 253
           L V+ G  +
Sbjct: 212 LHVSHGALA 220

Length = 223

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 142 VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI 200
           VV +SS+ G  P  +   Y  +K A+   + +L  E+ P   +V+ + PG     F   I
Sbjct: 132 VVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVKVSIIEPGN----FKTGI 187

Query: 201 TSNDGVRQTIEQNTLLNRL 219
           T N  + +   +  L  RL
Sbjct: 188 TGNSELWEKQAKK-LWERL 205

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 13/190 (6%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +  ++T  + GIG   A  L  +G  V  + RK    +E V  L+A G+E        + 
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCRK----EEDVAALEAEGLEAF--QLDYAE 58

Query: 73  GQQRKNLINQTIEKF-GKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
            +    L+ Q +E   G++D + +N A   P     L T+   L   ++ N      L +
Sbjct: 59  PESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTE--ALRAQFEANFFGWHDLTR 116

Query: 131 DAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA-PDTRVNCV 187
              P ++K     +V  SSI G  P      Y  +K A+ GL+  L  E+      V+ +
Sbjct: 117 RVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLI 176

Query: 188 APGFVPTHFA 197
            PG + T F 
Sbjct: 177 EPGPIETRFR 186

Length = 277

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 40/245 (16%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRK--------------QKNVDEAVVKLKARG 60
           AIVT  ++G+G  +AE+L   G +V+  +R               +  +D +     A  
Sbjct: 4   AIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAW 63

Query: 61  IEVIGVVCHVSNGQQRKNLINQ--TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
           +    ++    +G  R  LIN   T+E  G +  + + A A  +V               
Sbjct: 64  LAG-DLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIA-RAVG-------------- 107

Query: 119 DINVKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
            +NV + ++L    A      +   ++ ISS A     +  ++Y  TK AL    +A+A 
Sbjct: 108 -LNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVAL 166

Query: 177 EMAPDTRVNCVAPGFVPTHFAEYITSNDG----VRQTIEQNTLLNRLGTTRDMAAA-AAF 231
           +     R+  +APG V T     I + D     +R+   +      L T  D A    A+
Sbjct: 167 DANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAY 226

Query: 232 LASDD 236
           L SDD
Sbjct: 227 LLSDD 231

Length = 243

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 17/256 (6%)

Query: 6   MAKRFQGKVAIV--TASTQGIGFGIAERLGLEGASVVVSSRKQ---KNVDEAVVKLKARG 60
           M    QGK  ++   A+   I +GIA++L  +GA +  + + +   K V      L +  
Sbjct: 1   MEGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDF 60

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQ-----TKESVLD 115
           +    + C V +      +     +K+GK+D VV   A   S  + L+     T      
Sbjct: 61  V----LPCDVEDIASVDAVFEALEKKWGKLDFVVH--AIGFSDKNELKGRYADTTRENFS 114

Query: 116 KLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
           +   I+  S   + + AA  +  G S++ ++     +   +  + GV K AL    + LA
Sbjct: 115 RTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLA 174

Query: 176 AEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
           A+  P   RVN ++ G V T     I     +    ++N+ L R  T  ++  +A +L S
Sbjct: 175 ADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLS 234

Query: 235 DDASYITGETLVVAGG 250
           D +S +TGE   V  G
Sbjct: 235 DLSSGVTGEIHFVDSG 250

Length = 271

>gnl|CDD|235527 PRK05599, PRK05599, hypothetical protein; Provisional

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 5/187 (2%)

Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC-HVSNGQ 74
           ++   T  I   IA  L   G  VV+++R+ +        L+ RG   + V+     +  
Sbjct: 4   LILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLD 62

Query: 75  QRKNLINQTIEKFGKID-VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL-LLQDA 132
             + L+ QT E  G+I   VV+         +      +V     D   + S+L +L D 
Sbjct: 63  THRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADE 122

Query: 133 APHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM-APDTRVNCVAPGF 191
                  +++V  SSIAG++ + +  +YG TK  L    + LA  +     R+    PGF
Sbjct: 123 LRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGF 182

Query: 192 VPTHFAE 198
           V      
Sbjct: 183 VIGSMTT 189

Length = 246

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	255
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
PRK08177	225	short chain dehydrogenase; Provisional	100.0
PRK08264	238	short chain dehydrogenase; Validated	99.98
PRK09291	257	short chain dehydrogenase; Provisional	99.98
PRK08017	256	oxidoreductase; Provisional	99.98
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.97
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.95
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.93
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.93
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.93
PLN03209	576	translocon at the inner envelope of chloroplast su	99.93
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.92
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.92
PLN02653	340	GDP-mannose 4,6-dehydratase	99.92
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.9
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.9
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.9
PLN00198	338	anthocyanidin reductase; Provisional	99.89
PLN02572	442	UDP-sulfoquinovose synthase	99.89
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.89
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.89
PLN02650	351	dihydroflavonol-4-reductase	99.89
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.89
PRK06720	169	hypothetical protein; Provisional	99.89
PLN02583	297	cinnamoyl-CoA reductase	99.88
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.88
PLN02214	342	cinnamoyl-CoA reductase	99.87
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.87
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.87
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.86
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.86
PLN02240	352	UDP-glucose 4-epimerase	99.86
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.86
PLN02686	367	cinnamoyl-CoA reductase	99.85
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.85
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.85
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.84
PLN02427	386	UDP-apiose/xylose synthase	99.83
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.82
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.82
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.82
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.81
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.81
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.8
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.8
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.79
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.79
PLN02260	668	probable rhamnose biosynthetic enzyme	99.79
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.78
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.77
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.76
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.75
PLN02206	442	UDP-glucuronate decarboxylase	99.75
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.74
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.74
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.73
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.73
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.73
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.72
CHL00194	317	ycf39 Ycf39; Provisional	99.7
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.67
PRK07201	657	short chain dehydrogenase; Provisional	99.67
PLN02996	491	fatty acyl-CoA reductase	99.66
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.64
PLN02778	298	3,5-epimerase/4-reductase	99.61
PRK05865	854	hypothetical protein; Provisional	99.6
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.56
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.55
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.54
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.54
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.54
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.5
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.49
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.47
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.45
PLN02260	668	probable rhamnose biosynthetic enzyme	99.43
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.42
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.41
PRK12320	699	hypothetical protein; Provisional	99.4
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.37
PLN00016	378	RNA-binding protein; Provisional	99.36
PLN02503	605	fatty acyl-CoA reductase 2	99.36
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.34
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.31
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.28
PRK08309	177	short chain dehydrogenase; Provisional	99.28
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.1
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.08
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.97
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.96
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.95
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.94
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.94
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.87
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.85
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.83
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.79
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.72
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.69
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.63
PRK09620	229	hypothetical protein; Provisional	98.51
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.5
COG2910	211	Putative NADH-flavin reductase [General function p	98.47
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.41
PLN00106	323	malate dehydrogenase	98.4
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.39
PTZ00325	321	malate dehydrogenase; Provisional	98.33
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.33
PRK14982	340	acyl-ACP reductase; Provisional	98.32
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.31
KOG2774	366	consensus NAD dependent epimerase [General functio	98.3
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.19
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	98.06
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.04
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.95
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.95
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.94
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.92
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.92
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.87
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.86
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.85
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.85
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.83
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.81
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.73
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.73
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.73
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.71
COG3268	382	Uncharacterized conserved protein [Function unknow	97.7
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.69
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.69
PRK06849	389	hypothetical protein; Provisional	97.65
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.64
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.62
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.62
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.61
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.61
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.61
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	97.6
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.6
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.6
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.58
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.57
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.57
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.57
PRK14968	188	putative methyltransferase; Provisional	97.56
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.53
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.51
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.5
PRK05086	312	malate dehydrogenase; Provisional	97.48
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.46
PRK08655	437	prephenate dehydrogenase; Provisional	97.42
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	97.41
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.4
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.38
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.36
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.36
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.35
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	97.34
PRK04148	134	hypothetical protein; Provisional	97.31
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.31
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.28
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.28
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.28
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.25
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	97.25
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.23
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.22
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	97.19
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	97.16
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	97.16
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	97.15
KOG4288	283	consensus Predicted oxidoreductase [General functi	97.15
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	97.15
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.14
PLN02586	360	probable cinnamyl alcohol dehydrogenase	97.14
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	97.14
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	97.13
PRK09496	453	trkA potassium transporter peripheral membrane com	97.12
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.11
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.11
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.09
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	97.08
PLN02928	347	oxidoreductase family protein	97.07
PLN02740	381	Alcohol dehydrogenase-like	97.06
PLN02178	375	cinnamyl-alcohol dehydrogenase	97.06
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.06
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.05
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	97.05
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.04
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.03
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	97.03
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.03
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.01
PRK13256	226	thiopurine S-methyltransferase; Reviewed	97.01
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.98
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.97
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.95
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	96.94
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.93
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.93
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.92
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.91
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.91
PLN02494	477	adenosylhomocysteinase	96.91
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	96.9
PLN00203	519	glutamyl-tRNA reductase	96.89
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.87
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.87
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.86
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	96.84
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.83
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.82
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.82
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	96.82
PLN02827	378	Alcohol dehydrogenase-like	96.82
PRK07574	385	formate dehydrogenase; Provisional	96.81
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.81
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	96.81
PRK14967	223	putative methyltransferase; Provisional	96.79
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.78
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	96.76
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.76
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.75
PLN03139	386	formate dehydrogenase; Provisional	96.75
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	96.74
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.74
PRK08223	287	hypothetical protein; Validated	96.74
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	96.73
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.72
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.7
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.68
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.68
PRK13255	218	thiopurine S-methyltransferase; Reviewed	96.67
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.66
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.66
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.64
PLN02514	357	cinnamyl-alcohol dehydrogenase	96.64
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	96.63
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.63
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.63
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	96.62
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.61
PRK15128	396	23S rRNA m(5)C1962 methyltransferase; Provisional	96.61
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.6
PRK05442	326	malate dehydrogenase; Provisional	96.59
PTZ00117	319	malate dehydrogenase; Provisional	96.59
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	96.59
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.58
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.58
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	96.56
PRK08328	231	hypothetical protein; Provisional	96.56
PRK06487	317	glycerate dehydrogenase; Provisional	96.55
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.54
PF05724	218	TPMT: Thiopurine S-methyltransferase (TPMT); Inter	96.54
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	96.53
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	96.53
PRK07877	722	hypothetical protein; Provisional	96.53
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	96.5
PRK11207	197	tellurite resistance protein TehB; Provisional	96.48
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.48
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.47
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.47
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.47
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.44
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.44
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.44
PLN02306	386	hydroxypyruvate reductase	96.43
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.42
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.41
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.41
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.4
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	96.4
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.36
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.35
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.35
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.34
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	96.33
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.33
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.31
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	96.31
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.3
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	96.3
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	96.28
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.27
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	96.25
PRK09496	453	trkA potassium transporter peripheral membrane com	96.24
PRK12480	330	D-lactate dehydrogenase; Provisional	96.24
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	96.21
PRK14851	679	hypothetical protein; Provisional	96.21
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	96.21

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.8e-49  Score=323.90  Aligned_cols=242  Identities=23%  Similarity=0.278  Sum_probs=206.5

Q ss_pred             CCCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++|++|||||++  |||++++++|+++|++|++++|+....+.. +++....+...++++|+++.++++++++++.+.+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~-~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRV-KPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHH-HHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            6799999999996  999999999999999999999986443333 3332221223578999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           88 GKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|++|||||+...   ..++.+.+.++|++.+++|+.++++++++++|+|+++++||++||..+..+.+.+..|+++|
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asK  163 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVAK  163 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchhhhhH
Confidence            999999999997642   14677889999999999999999999999999998778999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +|+.+|+|+++.|+.+ |||||+|+||+++|++..................|.+++.+|+|+++.+.||+++...+++|+
T Consensus       164 aAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~itG~  243 (271)
T PRK06505        164 AALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTGE  243 (271)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccccCce
Confidence            9999999999999988 999999999999999864332222222333445678889999999999999999999999999


Q ss_pred             EEEeCCCcc
Q 025273          244 TLVVAGGMP  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      ++.+|||+.
T Consensus       244 ~i~vdgG~~  252 (271)
T PRK06505        244 IHFVDSGYN  252 (271)
T ss_pred             EEeecCCcc
Confidence            999999975

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.4e-49  Score=321.44  Aligned_cols=241  Identities=24%  Similarity=0.317  Sum_probs=211.0

Q ss_pred             cCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++|++|||||+  +|||++++++|+++|++|++++|+. +.+...+++.  ..++.+++||+++.++++++++++.+.
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            3689999999999  8999999999999999999999984 3333333332  346788999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhh
Q 025273           87 FGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|++|||||+...   ..++.+.+.++|++.+++|+.+++.+++.++|+|+++++||++||..+..+.+.+..|+++
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~as  160 (252)
T PRK06079         81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIA  160 (252)
T ss_pred             hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhHHH
Confidence            9999999999998642   2567888999999999999999999999999999888999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|+++|+++++.|+.+ |||||+|+||+++|++.......++..+......|.+++++|+|+++.+.||+++...+++|
T Consensus       161 Kaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG  240 (252)
T PRK06079        161 KAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTG  240 (252)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccccc
Confidence            99999999999999988 99999999999999986544333334444555668889999999999999999999999999


Q ss_pred             cEEEeCCCcc
Q 025273          243 ETLVVAGGMP  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      +++.+|||++
T Consensus       241 ~~i~vdgg~~  250 (252)
T PRK06079        241 DIIYVDKGVH  250 (252)
T ss_pred             cEEEeCCcee
Confidence            9999999964

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1.7e-49  Score=295.83  Aligned_cols=241  Identities=32%  Similarity=0.450  Sum_probs=220.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .++.|.++||||++|||+++++.|+++|++|++++++...++.....+..+ +....+.||++++.+++.++++..+.+|
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~g   89 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSLG   89 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhcC
Confidence            467799999999999999999999999999999999999888888877654 3555678999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcc--c--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL--Q--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      .|+++|||||+.. ...+..+..++|+..+.+|+.|.|+++|++.+.|  +  .+.+|||+||+.+..+..++..|+++|
T Consensus        90 ~psvlVncAGItr-D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK  168 (256)
T KOG1200|consen   90 TPSVLVNCAGITR-DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASK  168 (256)
T ss_pred             CCcEEEEcCcccc-ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhc
Confidence            9999999999976 5677788999999999999999999999999874  2  455999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +++.+|+|+.++|+.+ +||||.|.|||+.|||....  ++......-...|++|++++||+|..+.||+|+.++|++|+
T Consensus       169 ~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~m--p~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~  246 (256)
T KOG1200|consen  169 GGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM--PPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGT  246 (256)
T ss_pred             CceeeeeHHHHHHHhhcCceEeEeccccccChhhhhc--CHHHHHHHHccCCccccCCHHHHHHHHHHHhccccccccce
Confidence            9999999999999988 99999999999999999866  45667778888999999999999999999999999999999


Q ss_pred             EEEeCCCccc
Q 025273          244 TLVVAGGMPS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      .+.++||+.+
T Consensus       247 t~evtGGl~m  256 (256)
T KOG1200|consen  247 TLEVTGGLAM  256 (256)
T ss_pred             eEEEeccccC
Confidence            9999999853

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-48  Score=321.56  Aligned_cols=241  Identities=26%  Similarity=0.321  Sum_probs=205.0

Q ss_pred             CCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        10 l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +++|++|||||+  +|||++++++|+++|++|++++|+.+. +...+++. +.+.. .+++||+++.++++++++++.+.
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999997  899999999999999999999998532 22233332 22334 67899999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhh
Q 025273           87 FGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|++|||||+...   ..++.+.+.++|++++++|+.+++.+++.++|+|+++++||++||..+..+.+.+..|++|
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~as  160 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGVA  160 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhhH
Confidence            9999999999998642   2567888999999999999999999999999999888999999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|+.+|+++++.|+.+ |||||+|+||+++|++..................|++++++|+|+++.+.||+++...+++|
T Consensus       161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~itG  240 (274)
T PRK08415        161 KAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGVTG  240 (274)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhcccc
Confidence            99999999999999988 99999999999999875433211111122233457889999999999999999998899999


Q ss_pred             cEEEeCCCcc
Q 025273          243 ETLVVAGGMP  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      +++.+|||+.
T Consensus       241 ~~i~vdGG~~  250 (274)
T PRK08415        241 EIHYVDAGYN  250 (274)
T ss_pred             cEEEEcCccc
Confidence            9999999975

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.3e-48  Score=317.47  Aligned_cols=244  Identities=23%  Similarity=0.259  Sum_probs=208.1

Q ss_pred             cCCCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++||++|||||++  |||++++++|+++|++|++++|+. ..+...+++....+...+++||++++++++++++++.+.
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999997  999999999999999999999884 333344444333122356799999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhh
Q 025273           87 FGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|++|||||+...   ..++.+.+.++|++.+++|+.+++.+++.+.|+|+++++||++||..+..+.+.+..|++|
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~as  163 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVA  163 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchhhH
Confidence            9999999999997542   2467788999999999999999999999999999888999999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|+++|+++++.|+.+ +||||+|+||+++|++.......++.........|.+++++|+|+++.+.||+++...+++|
T Consensus       164 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG  243 (260)
T PRK06603        164 KAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTG  243 (260)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccCcc
Confidence            99999999999999988 99999999999999976433222222233444568889999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +++.+|||+..
T Consensus       244 ~~i~vdgG~~~  254 (260)
T PRK06603        244 EIHYVDCGYNI  254 (260)
T ss_pred             eEEEeCCcccc
Confidence            99999999764

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=3.6e-48  Score=317.60  Aligned_cols=245  Identities=27%  Similarity=0.371  Sum_probs=211.6

Q ss_pred             ccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCch--hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         8 ~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      .++++|++|||||+  +|||++++++|+++|++|++++|+.+  +.+...+++.+...++.++++|++++++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            35789999999986  89999999999999999999877643  334445555544456778899999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhh
Q 025273           84 IEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      .+++|++|++|||||+...   ..++.+.+.++|++.+++|+.+++.++++++|.|+++++||++||..+..+.+.+..|
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y  161 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVM  161 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchh
Confidence            9999999999999997542   3567888999999999999999999999999999888999999999998888999999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +++|+|+++|+++|+.|+.+ ||+||+|+||+++|++.......++.........+.+++++|+|+++.+.||+++..++
T Consensus       162 ~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~  241 (258)
T PRK07370        162 GVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASG  241 (258)
T ss_pred             hHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhcc
Confidence            99999999999999999988 99999999999999976543222233334445568889999999999999999999999


Q ss_pred             ccccEEEeCCCcc
Q 025273          240 ITGETLVVAGGMP  252 (255)
Q Consensus       240 ~~G~~i~~dgG~~  252 (255)
                      ++|+++.+|||+.
T Consensus       242 ~tG~~i~vdgg~~  254 (258)
T PRK07370        242 ITGQTIYVDAGYC  254 (258)
T ss_pred             ccCcEEEECCccc
Confidence            9999999999975

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.6e-48  Score=315.82  Aligned_cols=245  Identities=25%  Similarity=0.335  Sum_probs=209.8

Q ss_pred             ccccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCch---hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQK---NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      |+.++++|++|||||+  +|||++++++|+++|++|++++|+..   .++.+.+++.  +.++.+++||+++++++++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~   78 (257)
T PRK08594          1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACF   78 (257)
T ss_pred             CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHH
Confidence            4456889999999997  89999999999999999999987642   3333333331  457888999999999999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCC
Q 025273           81 NQTIEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSM  157 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~  157 (255)
                      +++.+++|++|++|||||+...   ..++.+.+.++|++.+++|+.+++.+++.++|+|+++++||++||..+..+.+.+
T Consensus        79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  158 (257)
T PRK08594         79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNY  158 (257)
T ss_pred             HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCC
Confidence            9999999999999999997532   2566788999999999999999999999999999878999999999998888889


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ..|+++|+|+++|+++++.|+.+ |||||+|+||+++|++..................|.+++.+|+|+++.+.|++++.
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~  238 (257)
T PRK08594        159 NVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDL  238 (257)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999988 99999999999999975433222222233344557788999999999999999999


Q ss_pred             CCCccccEEEeCCCcc
Q 025273          237 ASYITGETLVVAGGMP  252 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~  252 (255)
                      +++++|+++.+|||++
T Consensus       239 ~~~~tG~~~~~dgg~~  254 (257)
T PRK08594        239 SRGVTGENIHVDSGYH  254 (257)
T ss_pred             cccccceEEEECCchh
Confidence            9999999999999975

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-48  Score=316.49  Aligned_cols=244  Identities=25%  Similarity=0.417  Sum_probs=215.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++... +.++.++++|++++++++++++++. ++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~   83 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NI   83 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hh
Confidence            478999999999999999999999999999999999998888877777554 5578899999999999999999985 58


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|++|||+|... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.+.+..|+++|+
T Consensus        84 g~iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKa  162 (263)
T PRK08339         84 GEPDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRI  162 (263)
T ss_pred             CCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHH
Confidence            99999999999765 46778899999999999999999999999999996  3489999999999989899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---------ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      |+++|+++++.|+.+ |||||+|+||+++|++......         .+..........|.+++++|+|+++.+.||+++
T Consensus       163 al~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~  242 (263)
T PRK08339        163 SMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASD  242 (263)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcc
Confidence            999999999999998 9999999999999998643311         122223344556889999999999999999999


Q ss_pred             CCCCccccEEEeCCCcccC
Q 025273          236 DASYITGETLVVAGGMPSR  254 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~~  254 (255)
                      ...+++|+++.+|||...+
T Consensus       243 ~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        243 LGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             hhcCccCceEEECCCcccc
Confidence            9999999999999998765

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.8e-48  Score=315.08  Aligned_cols=248  Identities=27%  Similarity=0.339  Sum_probs=211.0

Q ss_pred             ccccccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      |-...+++||++|||||+  +|||++++++|+++|++|++++|+.+..+. .+++.+......+++||+++.++++++++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   80 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPY-VEPLAEELDAPIFLPLDVREPGQLEAVFA   80 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHH-HHHHHHhhccceEEecCcCCHHHHHHHHH
Confidence            334455789999999998  599999999999999999999998654322 22332222245678999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCCh
Q 025273           82 QTIEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMA  158 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~  158 (255)
                      ++.+.+|++|++|||||+...   ..++.+.+.++|++++++|+.+++.+++.++|+|+++++|+++||..+..+.+.+.
T Consensus        81 ~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~  160 (258)
T PRK07533         81 RIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYN  160 (258)
T ss_pred             HHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccch
Confidence            999999999999999997642   25677889999999999999999999999999998788999999999888888899


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      .|+++|+|+.+|+++++.|+.+ +||||+|+||+++|++.......++.........+.+++.+|+|++..+.||+++..
T Consensus       161 ~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~  240 (258)
T PRK07533        161 LMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAA  240 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChhh
Confidence            9999999999999999999988 999999999999999876543333333344455688899999999999999999988


Q ss_pred             CCccccEEEeCCCcc
Q 025273          238 SYITGETLVVAGGMP  252 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~  252 (255)
                      .+++|+.+.+|||..
T Consensus       241 ~~itG~~i~vdgg~~  255 (258)
T PRK07533        241 RRLTGNTLYIDGGYH  255 (258)
T ss_pred             ccccCcEEeeCCccc
Confidence            999999999999975

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1e-47  Score=313.75  Aligned_cols=244  Identities=30%  Similarity=0.477  Sum_probs=214.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+..  +...+++...+.++.++++|++++++++++++++.+.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999988743  34455555556789999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|++|||||... ..++.+.+.++|++++++|+.+++.+++++++.|++   +++||++||..++.+.+....|++||
T Consensus        82 g~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  160 (251)
T PRK12481         82 GHIDILINNAGIIR-RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK  160 (251)
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence            99999999999865 467788899999999999999999999999998852   47999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +|++.|+++++.|+.+ |||||+|+||+++|++.......+..........|.+++++|+|+++.+.||+++...+++|+
T Consensus       161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~  240 (251)
T PRK12481        161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGY  240 (251)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCc
Confidence            9999999999999988 999999999999999876543333333334456688899999999999999999999999999


Q ss_pred             EEEeCCCcccC
Q 025273          244 TLVVAGGMPSR  254 (255)
Q Consensus       244 ~i~~dgG~~~~  254 (255)
                      ++.+|||+..|
T Consensus       241 ~i~vdgg~~~~  251 (251)
T PRK12481        241 TLAVDGGWLAR  251 (251)
T ss_pred             eEEECCCEecC
Confidence            99999998654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-47  Score=312.79  Aligned_cols=243  Identities=23%  Similarity=0.293  Sum_probs=206.5

Q ss_pred             CCCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa--~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++|++|||||  ++|||++++++|+++|++|++++|+. +.+...+++....+....++||+++.++++++++++.+.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            67999999997  67999999999999999999998864 3334444554443345678999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCC---CC-ccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHh
Q 025273           88 GKIDVVVSNAAANPSV---DS-ILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      |++|++|||||+....   .+ +++.+.++|++++++|+.+++.+++.++|.|+ +.++||++||.++..+.+.+..|++
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y~a  162 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGM  162 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccchh
Confidence            9999999999986421   12 35678889999999999999999999999886 4479999999999888899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +|+|+.+|+++++.|+.+ |||||+|+||+++|++..................|++++++|+|+++.+.|++++.+.+++
T Consensus       163 sKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~~t  242 (261)
T PRK08690        163 AKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGIT  242 (261)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCCcc
Confidence            999999999999999998 9999999999999998654433233333344556889999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+++.+|||+..
T Consensus       243 G~~i~vdgG~~~  254 (261)
T PRK08690        243 GEITYVDGGYSI  254 (261)
T ss_pred             eeEEEEcCCccc
Confidence            999999999764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.5e-47  Score=310.86  Aligned_cols=243  Identities=24%  Similarity=0.314  Sum_probs=207.4

Q ss_pred             CCCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++|++|||||++  |||+++++.|+++|++|++++|+ +.++...+++....+...+++||++++++++++++++.+.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            5799999999986  99999999999999999999988 34445555555444456788999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCC----CCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhh
Q 025273           88 GKIDVVVSNAAANPSV----DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      |++|++|||||+....    ..+.+.+.++|++.+++|+.+++.+.+.+.|.++++++||++||..+..+.+.+..|++|
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~as  162 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLA  162 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHH
Confidence            9999999999975421    125567889999999999999999999999987777899999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|+++|+++++.|+.+ +||||+|+||+++|++..................|.+++.+|+|+++.+.||+++...+++|
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG  242 (262)
T PRK07984        163 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISG  242 (262)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccC
Confidence            99999999999999988 99999999999999875433222222233344567889999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.+.+|||+..
T Consensus       243 ~~i~vdgg~~~  253 (262)
T PRK07984        243 EVVHVDGGFSI  253 (262)
T ss_pred             cEEEECCCccc
Confidence            99999999753

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.7e-47  Score=310.39  Aligned_cols=243  Identities=24%  Similarity=0.282  Sum_probs=202.2

Q ss_pred             cCCCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa--~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++|++|||||  ++|||++++++|+++|++|++++|.....+. .+++........+++||++++++++++++++.++
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHH-HHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH
Confidence            367999999996  6899999999999999999998765322222 2233222123346899999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCC----CCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHh
Q 025273           87 FGKIDVVVSNAAANPSV----DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      +|++|++|||||.....    ..+++.+.++|++.+++|+.+++.++++++|+|++.++||++||..+..+.+.+..|++
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~a  161 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGL  161 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHH
Confidence            99999999999986421    12356788999999999999999999999999987789999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ||+|+..|+++++.|+.+ |||||+|+||+++|++.......++.........|.+++++|+|+++.+.||+++.+.+++
T Consensus       162 sKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~it  241 (260)
T PRK06997        162 AKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASGVT  241 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccCcc
Confidence            999999999999999988 9999999999999987543322122223334455788999999999999999999999999


Q ss_pred             ccEEEeCCCcc
Q 025273          242 GETLVVAGGMP  252 (255)
Q Consensus       242 G~~i~~dgG~~  252 (255)
                      |+++.+|||.+
T Consensus       242 G~~i~vdgg~~  252 (260)
T PRK06997        242 GEITHVDSGFN  252 (260)
T ss_pred             eeEEEEcCChh
Confidence            99999999975

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.2e-47  Score=312.37  Aligned_cols=243  Identities=24%  Similarity=0.290  Sum_probs=205.5

Q ss_pred             CCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++|++|||||+  +|||++++++|+++|++|++++|+... ....+++....+...++++|++++++++++++++.+.+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            578999999997  899999999999999999999887422 22223332222235678999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           88 GKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|++|||||+...   ..++.+.+.++|++.+++|+.+++.+++.++|.|+++++||++||.++..+.+.+..|++||
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asK  166 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAK  166 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHH
Confidence            999999999998642   25677889999999999999999999999999998889999999998888888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +|+.+|+++++.|+.+ +||||+|+||+++|++............+.....|.+++.+|+|+++.++||+++...+++|+
T Consensus       167 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG~  246 (272)
T PRK08159        167 AALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTGE  246 (272)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCccccCccce
Confidence            9999999999999988 999999999999998764332212222222335678889999999999999999999999999


Q ss_pred             EEEeCCCccc
Q 025273          244 TLVVAGGMPS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      +|.+|||+..
T Consensus       247 ~i~vdgG~~~  256 (272)
T PRK08159        247 VHHVDSGYHV  256 (272)
T ss_pred             EEEECCCcee
Confidence            9999999753

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-47  Score=309.61  Aligned_cols=247  Identities=29%  Similarity=0.452  Sum_probs=218.1

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA--RGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++..  .+.++.+++||++++++++++++++
T Consensus         1 ~~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (260)
T PRK07063          1 MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA   80 (260)
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999888888888765  3567889999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhH
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      .+.++++|++|||||... ..+..+.+.++|++++++|+.+++.++++++|.|+  +.++||++||..+..+.+...+|+
T Consensus        81 ~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (260)
T PRK07063         81 EEAFGPLDVLVNNAGINV-FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYP  159 (260)
T ss_pred             HHHhCCCcEEEECCCcCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHH
Confidence            999999999999999764 34556788899999999999999999999999985  347999999999999888999999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---C-hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---N-DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ++|+|++.|+++++.|+.+ |||||+|+||+++|++......   . ...........+.+++.+|+|++..+.||+++.
T Consensus       160 ~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~  239 (260)
T PRK07063        160 VAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDE  239 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999988 9999999999999998654321   1 112233445668899999999999999999999


Q ss_pred             CCCccccEEEeCCCccc
Q 025273          237 ASYITGETLVVAGGMPS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      ..+++|+.+.+|||...
T Consensus       240 ~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        240 APFINATCITIDGGRSV  256 (260)
T ss_pred             ccccCCcEEEECCCeee
Confidence            99999999999999764

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-46  Score=307.56  Aligned_cols=245  Identities=31%  Similarity=0.487  Sum_probs=218.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++++.+.+++...+.++.+++||+++.++++++++++.++++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            46799999999999999999999999999999999999888888888877677899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCcc-CCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGY-QPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~-~~~~~~~~y~~sK~  165 (255)
                      ++|++|||||......++.+.+.++|++.+++|+.+++.+.+.++|.|+  +.++||++||..+. .+.+.+..|++||+
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  162 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKA  162 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHH
Confidence            9999999999865456778889999999999999999999999999885  45799999999886 56788999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.++++++.|+.+ +|++++|+||+++|++.+.....+..........+.+++.+|+|+++.++||+++...+++|++
T Consensus       163 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  242 (254)
T PRK07478        163 GLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTA  242 (254)
T ss_pred             HHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCe
Confidence            999999999999988 9999999999999998765544444444455556778899999999999999999889999999


Q ss_pred             EEeCCCccc
Q 025273          245 LVVAGGMPS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +.+|||...
T Consensus       243 ~~~dgg~~~  251 (254)
T PRK07478        243 LLVDGGVSI  251 (254)
T ss_pred             EEeCCchhc
Confidence            999999753

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-46  Score=306.13  Aligned_cols=241  Identities=32%  Similarity=0.497  Sum_probs=213.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|++++++++++++++.+.++
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999999888888888877677889999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCC-C-CChhhHhh
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQ-S-SMAMYGVT  163 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~-~-~~~~y~~s  163 (255)
                      ++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.+.|.+   +++|+++||..+..+. + ....|+++
T Consensus        86 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~as  164 (253)
T PRK05867         86 GIDIAVCNAGIIT-VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCAS  164 (253)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHH
Confidence            9999999999865 466778899999999999999999999999998853   4689999998876432 2 45789999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|++.|+++++.|+.+ ||++|+|+||+++|++.....   +.........+.+++.+|+|+++++.||+++...+++|
T Consensus       165 Kaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~tG  241 (253)
T PRK05867        165 KAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT---EYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTG  241 (253)
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcCC
Confidence            99999999999999988 999999999999999875432   22233444567889999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.+.+|||+..
T Consensus       242 ~~i~vdgG~~~  252 (253)
T PRK05867        242 SDIVIDGGYTC  252 (253)
T ss_pred             CeEEECCCccC
Confidence            99999999764

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.9e-46  Score=306.83  Aligned_cols=244  Identities=32%  Similarity=0.496  Sum_probs=214.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+ +.++...+++...+.++.+++||+++.++++++++++.+.+|
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999999 777777777766667899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      ++|++|||||......++.+.+.+.|++++++|+.+++.+++.++|+|+ ++++||++||..+..+.+....|+++|+|+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal  161 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAV  161 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCchHHHHHHHH
Confidence            9999999999865445677888999999999999999999999999985 458999999999998888899999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChh------HHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG------VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +.|+++++.|+.+ ||+||+|+||+++|++........+      .........+.+++.+|+|+++.+.|++++...++
T Consensus       162 ~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  241 (272)
T PRK08589        162 INFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFI  241 (272)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence            9999999999988 9999999999999998765432211      11111223577888999999999999999988999


Q ss_pred             cccEEEeCCCccc
Q 025273          241 TGETLVVAGGMPS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      +|+++.+|||...
T Consensus       242 ~G~~i~vdgg~~~  254 (272)
T PRK08589        242 TGETIRIDGGVMA  254 (272)
T ss_pred             CCCEEEECCCccc
Confidence            9999999999753

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=3.3e-46  Score=310.03  Aligned_cols=245  Identities=25%  Similarity=0.272  Sum_probs=207.4

Q ss_pred             ccCCCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc---------CC----eEEEEEecC--
Q 025273            8 KRFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR---------GI----EVIGVVCHV--   70 (255)
Q Consensus         8 ~~l~~k~vlItGa--~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~~----~~~~~~~Dv--   70 (255)
                      ++|+||++|||||  ++|||+++|+.|+++|++|++ +|+.+.++.+...+...         .+    ....+++|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4589999999999  899999999999999999998 78888888777666421         11    146788999  


Q ss_pred             CC------------------HHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCccCCCHHHHHHHHHHHhHHHHHHHHH
Q 025273           71 SN------------------GQQRKNLINQTIEKFGKIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLLQD  131 (255)
Q Consensus        71 ~~------------------~~~v~~~~~~~~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  131 (255)
                      ++                  .++++++++++.+.+|++|+||||||... ...++.+.+.++|++++++|+.+++.+++.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            33                  34899999999999999999999998643 236788999999999999999999999999


Q ss_pred             HhhcccCCCeEEEEcccCccCCCCCC-hhhHhhHHHHHHHHHHHHHHhC-C-CeeEEEEeCCcccCCccccccCChhHHH
Q 025273          132 AAPHLQKGSSVVLISSIAGYQPQSSM-AMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAEYITSNDGVRQ  208 (255)
Q Consensus       132 ~~~~~~~~~~iv~iss~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~-~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~  208 (255)
                      ++|+|++.|+||++||..+..+.+.+ ..|+++|+|+++|+++|+.|+. + +||||+|+||+++|++.......+....
T Consensus       164 ~~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~  243 (303)
T PLN02730        164 FGPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIE  243 (303)
T ss_pred             HHHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHH
Confidence            99999877999999999988887765 5899999999999999999996 3 8999999999999998765322222222


Q ss_pred             HHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          209 TIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       209 ~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ......|.+++.+|+|++..+.||+++...+++|+.+.+|||+..
T Consensus       244 ~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~  288 (303)
T PLN02730        244 YSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNA  288 (303)
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccc
Confidence            333445778899999999999999999999999999999999764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-46  Score=305.72  Aligned_cols=248  Identities=27%  Similarity=0.424  Sum_probs=216.2

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |+.++++|++|||||++|||++++++|+++|++|++++| +.+.++...+++... +.++.++++|+++.++++++++++
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999998865 555666666666543 568899999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCC-----CCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCC
Q 025273           84 IEKFGKIDVVVSNAAANP-----SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSS  156 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~  156 (255)
                      .+.++++|++|||||...     ...++.+.+.+++++.+++|+.+++.+++.++|.|++  .++||++||..+..+.+.
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN  161 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC
Confidence            999999999999998642     1346677888999999999999999999999999863  579999999998888889


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      +..|+++|+|++.|+++++.|+.+ |||||+|+||+++|++.......++..+......+.+++.+|+|+++.++|++++
T Consensus       162 ~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~  241 (260)
T PRK08416        162 YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSE  241 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCh
Confidence            999999999999999999999988 9999999999999998765544444444555567888999999999999999999


Q ss_pred             CCCCccccEEEeCCCccc
Q 025273          236 DASYITGETLVVAGGMPS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      ...+++|+.+.+|||...
T Consensus       242 ~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        242 KASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             hhhcccCcEEEEcCCeec
Confidence            889999999999999764

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.6e-46  Score=306.28  Aligned_cols=244  Identities=24%  Similarity=0.256  Sum_probs=204.9

Q ss_pred             ccccCCCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEeCCc--hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         6 ~~~~l~~k~vlItGa--~~giG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      ||.++++|+++||||  ++|||++++++|+++|++|++++|+.  +.++.+.+++   +.++.+++||+++.++++++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~   77 (256)
T PRK07889          1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLAD   77 (256)
T ss_pred             CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHH
Confidence            345688999999999  89999999999999999999999874  2233333333   3367789999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCC---CCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCCh
Q 025273           82 QTIEKFGKIDVVVSNAAANPSV---DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMA  158 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~  158 (255)
                      ++.+.+|++|++|||||+....   .++.+.+.++|++++++|+.+++.+++.++|+|+++++||++|+.. ..+.+.+.
T Consensus        78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~-~~~~~~~~  156 (256)
T PRK07889         78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA-TVAWPAYD  156 (256)
T ss_pred             HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc-cccCCccc
Confidence            9999999999999999986421   3567788999999999999999999999999998788999998653 44566788


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccC-CCCCHHHHHHHHHHhcCCC
Q 025273          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLN-RLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~a~~~~~l~s~~  236 (255)
                      .|++||+|+.+|+++++.|+.+ |||||+|+||+++|++...+.........+....+.+ ++.+|+|+++.+.||+++.
T Consensus       157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~  236 (256)
T PRK07889        157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDW  236 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcc
Confidence            8999999999999999999988 9999999999999998765433233333334445666 5889999999999999998


Q ss_pred             CCCccccEEEeCCCccc
Q 025273          237 ASYITGETLVVAGGMPS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      ..+++|+++.+|||...
T Consensus       237 ~~~~tG~~i~vdgg~~~  253 (256)
T PRK07889        237 FPATTGEIVHVDGGAHA  253 (256)
T ss_pred             cccccceEEEEcCceec
Confidence            89999999999999763

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-45  Score=308.12  Aligned_cols=245  Identities=28%  Similarity=0.403  Sum_probs=214.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc--hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.  +..+.+.+.+...+.++.++++|+++.++++++++++.+
T Consensus        45 ~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999988754  344555555555566888999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      .++++|++|||||......++.+.+.++|++++++|+.+++.++++++|+|+++++||++||..++.+.+....|+++|+
T Consensus       125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKa  204 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKA  204 (294)
T ss_pred             HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHH
Confidence            99999999999997544567788899999999999999999999999999987889999999999988889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      |++.|++.++.|+.+ |||+|+|+||+++|++.......++....+....+.+++.+|+|+++.+.||+++...+++|+.
T Consensus       205 al~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~  284 (294)
T PRK07985        205 AILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEV  284 (294)
T ss_pred             HHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccccE
Confidence            999999999999987 9999999999999998643222333334455667888999999999999999999999999999


Q ss_pred             EEeCCCcc
Q 025273          245 LVVAGGMP  252 (255)
Q Consensus       245 i~~dgG~~  252 (255)
                      +.+|||.+
T Consensus       285 i~vdgG~~  292 (294)
T PRK07985        285 HGVCGGEH  292 (294)
T ss_pred             EeeCCCee
Confidence            99999975

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=5.5e-46  Score=303.67  Aligned_cols=247  Identities=43%  Similarity=0.643  Sum_probs=214.1

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      +..++||++||||+++|||+++|++|++.|++|++++|+.+.++..++++...   +.++..+.||+++++++++++++.
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999998888887665   346999999999999999999999


Q ss_pred             HHH-hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHH-HHHHHHHHhhccc--CCCeEEEEcccCccCCCCCC-h
Q 025273           84 IEK-FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS-SILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSM-A  158 (255)
Q Consensus        84 ~~~-~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~-~  158 (255)
                      .++ +|++|++|||||......+..+.++++|++++++|+.| .+.+.+.+.++++  +++.|+++||..+..+..+. .
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~  162 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGV  162 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcc
Confidence            998 69999999999998766689999999999999999995 6666666667775  57899999999988776555 7


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC---hhHHHH--HHhhcccCCCCCHHHHHHHHHHh
Q 025273          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---DGVRQT--IEQNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~d~a~~~~~l  232 (255)
                      .|+++|+|+++|+|++|.|+.+ +||+|+|+||++.|++.......   +...+.  .....|.++++.|+|++..+.||
T Consensus       163 ~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fl  242 (270)
T KOG0725|consen  163 AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFL  242 (270)
T ss_pred             cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhh
Confidence            9999999999999999999999 99999999999999982111111   222222  33456899999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCccc
Q 025273          233 ASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++++.++++|+++.+|||.+.
T Consensus       243 a~~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  243 ASDDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             cCcccccccCCEEEEeCCEEe
Confidence            999988999999999999875

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=8.8e-46  Score=288.34  Aligned_cols=228  Identities=26%  Similarity=0.372  Sum_probs=203.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+++|+++|||||||||.++++.|+++|++|++++|+.++++.+++++..  .++.++..|++|.++++.+++.+.++|
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~   79 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF   79 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence            456789999999999999999999999999999999999999999988864  689999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +++|+||||||.... .++.+.+.++|++++++|+.|.++.+++++|.|.  +.|.|||+||++|..+++..+.|+++|+
T Consensus        80 g~iDiLvNNAGl~~g-~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~  158 (246)
T COG4221          80 GRIDILVNNAGLALG-DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKA  158 (246)
T ss_pred             CcccEEEecCCCCcC-ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHH
Confidence            999999999998774 8999999999999999999999999999999995  5779999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      ++..|+..|+.|+.. +|||..|+||.+.|..+....... ..++...........+|+|+|+.+.|.++.+...
T Consensus       159 aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g-~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~v  232 (246)
T COG4221         159 AVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG-DDERADKVYKGGTALTPEDIAEAVLFAATQPQHV  232 (246)
T ss_pred             HHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc-hhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCcc
Confidence            999999999999977 999999999999887766655443 2233333333445679999999999999888664

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-45  Score=301.42  Aligned_cols=247  Identities=25%  Similarity=0.408  Sum_probs=222.1

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++.++++++++++.+.
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            34678999999999999999999999999999999999988888887777766678889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+.+.+.+.++  +.++||++||..+..+.+....|+++|
T Consensus        84 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         84 IGPIDVLINNAGIQR-RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             cCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence            999999999999764 46778889999999999999999999999999885  457999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.++++++.|+.+ +|++|+|+||+++|++.......+....+.....|.+++++|+|+++.+.|++++.+++++|+
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~  242 (254)
T PRK08085        163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGH  242 (254)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCC
Confidence            9999999999999988 999999999999999876554444445556667788999999999999999999999999999


Q ss_pred             EEEeCCCcccC
Q 025273          244 TLVVAGGMPSR  254 (255)
Q Consensus       244 ~i~~dgG~~~~  254 (255)
                      ++.+|||+...
T Consensus       243 ~i~~dgg~~~~  253 (254)
T PRK08085        243 LLFVDGGMLVA  253 (254)
T ss_pred             EEEECCCeeec
Confidence            99999998653

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=2.3e-45  Score=307.27  Aligned_cols=245  Identities=30%  Similarity=0.457  Sum_probs=216.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch--hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++|++|||||++|||++++++|+++|++|++++++.+  ..+...+.+...+.++.+++||+++.++++++++++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999887643  344555666666778889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++++|++|||||......++.+.+.++|++.+++|+.+++.+++.++++|+++++||++||..++.+.+.+..|+++|+|
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a  211 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAA  211 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHH
Confidence            99999999999986545678889999999999999999999999999999888899999999999988899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.|+++++.++.+ ||+||+|+||+++|++.......++....+....+.+++++|+|++..+.||+++...+++|+.+
T Consensus       212 ~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~  291 (300)
T PRK06128        212 IVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTGEVF  291 (300)
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccCcEE
Confidence            99999999999987 99999999999999986432223333444555678899999999999999999998889999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||...
T Consensus       292 ~v~gg~~~  299 (300)
T PRK06128        292 GVTGGLLL  299 (300)
T ss_pred             eeCCCEeC
Confidence            99999864

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-45  Score=298.51  Aligned_cols=246  Identities=28%  Similarity=0.456  Sum_probs=222.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+++||++++++|+++|++|++++|++++++...+++...+.++.++++|+++.++++++++++.+.++
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            48899999999999999999999999999999999998888777777766667899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||+|... ..++.+.+.++|++++++|+.+++++++.+.+.|+  ..++||++||..+..+.+....|+++|++
T Consensus        87 ~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a  165 (255)
T PRK07523         87 PIDILVNNAGMQF-RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGA  165 (255)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHH
Confidence            9999999999875 46788889999999999999999999999999885  35799999999988888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.++++++.|+.+ +|++++|+||+++|++.......+....+.....+.+++..|+|+++.+.||+++...+++|+.+
T Consensus       166 ~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  245 (255)
T PRK07523        166 VGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVL  245 (255)
T ss_pred             HHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEE
Confidence            99999999999987 99999999999999987655444455556666778899999999999999999998899999999


Q ss_pred             EeCCCcccCC
Q 025273          246 VVAGGMPSRL  255 (255)
Q Consensus       246 ~~dgG~~~~~  255 (255)
                      .+|||+..+|
T Consensus       246 ~~~gg~~~~~  255 (255)
T PRK07523        246 YVDGGITASL  255 (255)
T ss_pred             EECCCeeccC
Confidence            9999988664

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=4.8e-45  Score=298.40  Aligned_cols=243  Identities=27%  Similarity=0.468  Sum_probs=213.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++||++|||||++|||++++++|+++|++|++++++..  +...+++...+.++.++++|+++.++++++++++.+.++
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999887643  344455555566888999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++|++|||||+.. ..++.+.+.++|++.+++|+.+++.+++++.+.|++   +++||++||..+..+.+....|+++|+
T Consensus        85 ~~D~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  163 (253)
T PRK08993         85 HIDILVNNAGLIR-REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKS  163 (253)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHH
Confidence            9999999999865 456778899999999999999999999999998852   479999999999888888899999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      |++.++++++.|+.+ ||+||.|+||+++|++.......+..........|.+++.+|+|+++.+.|++++..++++|++
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~  243 (253)
T PRK08993        164 GVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYT  243 (253)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcE
Confidence            999999999999988 9999999999999998765543333333445567889999999999999999999999999999


Q ss_pred             EEeCCCcccC
Q 025273          245 LVVAGGMPSR  254 (255)
Q Consensus       245 i~~dgG~~~~  254 (255)
                      +.+|||...|
T Consensus       244 ~~~dgg~~~~  253 (253)
T PRK08993        244 IAVDGGWLAR  253 (253)
T ss_pred             EEECCCEecC
Confidence            9999998654

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=5.6e-45  Score=301.92  Aligned_cols=250  Identities=28%  Similarity=0.446  Sum_probs=219.1

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |.+.+++++|+++||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|++++++++.+++++
T Consensus         2 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (278)
T PRK08277          2 MPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQI   81 (278)
T ss_pred             CCceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            44455688999999999999999999999999999999999988888887777666678999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCC--------------CCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcc
Q 025273           84 IEKFGKIDVVVSNAAANPSV--------------DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISS  147 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~--------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss  147 (255)
                      .+.++++|++|||||.....              .++.+.+.++|++.+++|+.+++.+.+.+++.|+  +.++||++||
T Consensus        82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS  161 (278)
T PRK08277         82 LEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISS  161 (278)
T ss_pred             HHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            99999999999999965321              3467788999999999999999999999999885  4589999999


Q ss_pred             cCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC-----hhHHHHHHhhcccCCCCC
Q 025273          148 IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-----DGVRQTIEQNTLLNRLGT  221 (255)
Q Consensus       148 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  221 (255)
                      ..++.+.+....|+++|+|++.|+++++.|+.+ +||+|+|+||+++|++.+.+...     .+.........+.+++++
T Consensus       162 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  241 (278)
T PRK08277        162 MNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGK  241 (278)
T ss_pred             chhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCC
Confidence            999999999999999999999999999999988 99999999999999986544221     122233445568899999


Q ss_pred             HHHHHHHHHHhcCC-CCCCccccEEEeCCCccc
Q 025273          222 TRDMAAAAAFLASD-DASYITGETLVVAGGMPS  253 (255)
Q Consensus       222 ~~d~a~~~~~l~s~-~~~~~~G~~i~~dgG~~~  253 (255)
                      |+|+++++.||+++ ...+++|++|.+|||+..
T Consensus       242 ~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~  274 (278)
T PRK08277        242 PEELLGTLLWLADEKASSFVTGVVLPVDGGFSA  274 (278)
T ss_pred             HHHHHHHHHHHcCccccCCcCCCEEEECCCeec
Confidence            99999999999999 889999999999999865

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-45  Score=297.84  Aligned_cols=242  Identities=30%  Similarity=0.479  Sum_probs=209.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH--
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK--   86 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--   86 (255)
                      +++|++|||||++|||++++++|+++|++|++++ |+.+..+....++...+.++..+++|+++.++++.+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            3589999999999999999999999999998875 5666666666777666677888999999999999999888763  


Q ss_pred             --hC--CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHh
Q 025273           87 --FG--KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        87 --~g--~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                        ++  ++|++|||||+.. ..++.+.+.++|++++++|+.+++.+++.++|.|++.++||++||..+..+.+....|++
T Consensus        82 ~~~g~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  160 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSM  160 (252)
T ss_pred             hhcCCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHH
Confidence              34  8999999999764 466788899999999999999999999999999987789999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ||+|++.++++++.|+.+ +||+|+|+||+++|++.......+..........+.+++.+|+|+++.+.||+++...+++
T Consensus       161 sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  240 (252)
T PRK12747        161 TKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT  240 (252)
T ss_pred             HHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCcC
Confidence            999999999999999988 9999999999999998765433333222222334678899999999999999999889999


Q ss_pred             ccEEEeCCCcc
Q 025273          242 GETLVVAGGMP  252 (255)
Q Consensus       242 G~~i~~dgG~~  252 (255)
                      |+.+.+|||..
T Consensus       241 G~~i~vdgg~~  251 (252)
T PRK12747        241 GQLIDVSGGSC  251 (252)
T ss_pred             CcEEEecCCcc
Confidence            99999999964

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-45  Score=300.40  Aligned_cols=246  Identities=28%  Similarity=0.437  Sum_probs=214.9

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...  +.++.++++|+++.++++++++++.
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999998888877777654  3478899999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHh
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      +.++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|+  +.++||++||..+..+.+....|++
T Consensus        83 ~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~a  161 (265)
T PRK07062         83 ARFGGVDMLVNNAGQGR-VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSA  161 (265)
T ss_pred             HhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHH
Confidence            99999999999999864 46778889999999999999999999999999996  3579999999999988888999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC--------ChhHHHHH--HhhcccCCCCCHHHHHHHHHH
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--------NDGVRQTI--EQNTLLNRLGTTRDMAAAAAF  231 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~d~a~~~~~  231 (255)
                      +|+|+.+|+++++.|+.+ ||++|+|+||+++|++......        ........  ....+.+++.+|+|+++.+.|
T Consensus       162 sKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~  241 (265)
T PRK07062        162 ARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFF  241 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHH
Confidence            999999999999999988 9999999999999997643211        11111111  234578889999999999999


Q ss_pred             hcCCCCCCccccEEEeCCCccc
Q 025273          232 LASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+++...+++|+++.+|||+..
T Consensus       242 L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        242 LASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HhCchhcccccceEEEcCceEe
Confidence            9998889999999999999764

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-45  Score=298.33  Aligned_cols=243  Identities=28%  Similarity=0.404  Sum_probs=211.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+ .++...+++...+.++.++++|++++++++++++++.+.
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999864 456666667666678889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCC--CChhhHh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQS--SMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~--~~~~y~~  162 (255)
                      ++++|++|||||... ..++.+.+.++|++++++|+.+++.+++++++.|+  +.++||++||..+..+.+  ....|++
T Consensus        84 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~  162 (254)
T PRK06114         84 LGALTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNA  162 (254)
T ss_pred             cCCCCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHH
Confidence            999999999999865 46678889999999999999999999999999885  457999999998876544  3689999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +|+|++.++++++.|+.+ |||+|+|+||+++|++.... .............|++++.+|+|+++.+.||+++..++++
T Consensus       163 sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~t  241 (254)
T PRK06114        163 SKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFCT  241 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcC
Confidence            999999999999999988 99999999999999986531 1112233445567889999999999999999999999999


Q ss_pred             ccEEEeCCCcc
Q 025273          242 GETLVVAGGMP  252 (255)
Q Consensus       242 G~~i~~dgG~~  252 (255)
                      |+++.+|||+.
T Consensus       242 G~~i~~dgg~~  252 (254)
T PRK06114        242 GVDLLVDGGFV  252 (254)
T ss_pred             CceEEECcCEe
Confidence            99999999975

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2e-46  Score=304.39  Aligned_cols=232  Identities=40%  Similarity=0.651  Sum_probs=213.8

Q ss_pred             cCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHh-CCCCEEE
Q 025273           19 AST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKF-GKIDVVV   94 (255)
Q Consensus        19 Ga~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~~d~lv   94 (255)
                      |++  +|||++++++|+++|++|++++|+.+.++...+++... +.+  +++||++++++++++++++.+.+ |++|++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            666  99999999999999999999999999876666666554 444  59999999999999999999999 9999999


Q ss_pred             EcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHH
Q 025273           95 SNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (255)
Q Consensus        95 ~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~  171 (255)
                      ||+|....   ..++.+.+.++|++.+++|+.+++.+.+++.|+|+++++||++||..+..+.+.+..|+++|+|++.|+
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~  158 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLT  158 (241)
T ss_dssp             EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHH
T ss_pred             ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHH
Confidence            99998764   477888899999999999999999999999999998899999999999999999999999999999999


Q ss_pred             HHHHHHhCC--CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCC
Q 025273          172 KALAAEMAP--DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       172 ~~la~e~~~--~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                      |+++.|+.+  |||||+|+||++.|++.......++..+......|++++++|+|+|+++.||+|+..+++|||+|.+||
T Consensus       159 r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDG  238 (241)
T PF13561_consen  159 RSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVDG  238 (241)
T ss_dssp             HHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred             HHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence            999999988  999999999999999977666667788888899999999999999999999999999999999999999


Q ss_pred             Ccc
Q 025273          250 GMP  252 (255)
Q Consensus       250 G~~  252 (255)
                      |++
T Consensus       239 G~s  241 (241)
T PF13561_consen  239 GFS  241 (241)
T ss_dssp             TGG
T ss_pred             CcC
Confidence            985

...

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-45  Score=298.09  Aligned_cols=244  Identities=31%  Similarity=0.485  Sum_probs=216.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+ +..+.+.+.+...+.++.+++||+++.++++++++++.+.+|
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG   90 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999998 556666666666567889999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.+++.|+  +.++|+++||..+..+.+.++.|+++|++
T Consensus        91 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  169 (258)
T PRK06935         91 KIDILVNNAGTIR-RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHG  169 (258)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHH
Confidence            9999999999865 46777888999999999999999999999999986  35799999999998888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.|++++++|+.+ ||+||.|+||+++|++.......+..........+.+++.+|+|+++.+.||+++...+++|+++
T Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  249 (258)
T PRK06935        170 VAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHIL  249 (258)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEE
Confidence            99999999999988 99999999999999987654433333334445567889999999999999999999999999999


Q ss_pred             EeCCCcccC
Q 025273          246 VVAGGMPSR  254 (255)
Q Consensus       246 ~~dgG~~~~  254 (255)
                      .+|||+..|
T Consensus       250 ~~dgg~~~~  258 (258)
T PRK06935        250 AVDGGWLVR  258 (258)
T ss_pred             EECCCeecC
Confidence            999998765

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-45  Score=296.55  Aligned_cols=247  Identities=32%  Similarity=0.491  Sum_probs=221.2

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++++++|++|||||+|+||++++++|+++|++|++++|+.+.++...+++...+.++.++++|+++.++++++++++.+.
T Consensus         2 ~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          2 SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888888877766778999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|++|||+|......++.+.+.++|++++++|+.+++.++++++|.|+  +.+++|++||..+..+.+.+..|+++|
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  161 (253)
T PRK06172         82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASK  161 (253)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHH
Confidence            999999999999865445577889999999999999999999999999885  457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      ++++.|+++++.|+.+ +|++++|+||+++|++...... .+.....+....+.++..+|+|+++.+.||+++...+++|
T Consensus       162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G  241 (253)
T PRK06172        162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTG  241 (253)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCC
Confidence            9999999999999987 9999999999999998776533 3444445556677888999999999999999999899999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.|.+|||+..
T Consensus       242 ~~i~~dgg~~~  252 (253)
T PRK06172        242 HALMVDGGATA  252 (253)
T ss_pred             cEEEECCCccC
Confidence            99999999853

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-45  Score=300.38  Aligned_cols=242  Identities=29%  Similarity=0.437  Sum_probs=209.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++++|+++.++++.+++++.+.++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   79 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAFG   79 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhcC
Confidence            367999999999999999999999999999999999988777665544   34688899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHH----HHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESV----LDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      ++|++|||||+.....++.+.+.++    |++++++|+.+++.+++.++|.|+ ++++||++||..+..+.++...|+++
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  159 (263)
T PRK06200         80 KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTAS  159 (263)
T ss_pred             CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHHH
Confidence            9999999999864344555666655    899999999999999999999985 56899999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc---------CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT---------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      |+|++.|+++++.|+.++||||+|+||+++|++.....         ..++.........|++++.+|+|+++.+.||++
T Consensus       160 K~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s  239 (263)
T PRK06200        160 KHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLAS  239 (263)
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheec
Confidence            99999999999999988899999999999999864211         112223344556688999999999999999999


Q ss_pred             CC-CCCccccEEEeCCCccc
Q 025273          235 DD-ASYITGETLVVAGGMPS  253 (255)
Q Consensus       235 ~~-~~~~~G~~i~~dgG~~~  253 (255)
                      +. ..+++|+.+.+|||+..
T Consensus       240 ~~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        240 RRNSRALTGVVINADGGLGI  259 (263)
T ss_pred             ccccCcccceEEEEcCceee
Confidence            98 89999999999999765

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-44  Score=293.46  Aligned_cols=245  Identities=36%  Similarity=0.550  Sum_probs=220.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999888888888887666788899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +++|++|||||......++.+.+.+++++.+++|+.+++.++++++++|+  +.++|+++||..+..+.+++..|++||+
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  163 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKA  163 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHH
Confidence            99999999999764446677889999999999999999999999999985  4579999999999888899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.|+++++.|+.+ ||++++|+||+++|++.......+..........+.+++.+|+|+++.+.|++++...+++|++
T Consensus       164 al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~  243 (252)
T PRK07035        164 AVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGEC  243 (252)
T ss_pred             HHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCE
Confidence            999999999999988 9999999999999998766554444444555566788899999999999999999999999999


Q ss_pred             EEeCCCcc
Q 025273          245 LVVAGGMP  252 (255)
Q Consensus       245 i~~dgG~~  252 (255)
                      +.+|||+.
T Consensus       244 ~~~dgg~~  251 (252)
T PRK07035        244 LNVDGGYL  251 (252)
T ss_pred             EEeCCCcC
Confidence            99999975

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-44  Score=294.07  Aligned_cols=241  Identities=29%  Similarity=0.452  Sum_probs=209.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.+++||++++++++++++++.+.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF   78 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4567999999999999999999999999999999999987766665554   4578899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcc-cCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      +++|++|||||.... .. .+.+.++|++.+++|+.+++.+++.++++| +++++||++||..+..+.+....|+++|++
T Consensus        79 g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa  156 (261)
T PRK08265         79 GRVDILVNLACTYLD-DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAA  156 (261)
T ss_pred             CCCCEEEECCCCCCC-Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHH
Confidence            999999999997642 22 356889999999999999999999999998 467899999999999888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC-hhHHHHH-HhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVRQTI-EQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++.++++++.|+.+ +|++|+|+||+++|++....... ....... ....+.+++.+|+|+++.+.|++++...+++|+
T Consensus       157 ~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~  236 (261)
T PRK08265        157 IRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGA  236 (261)
T ss_pred             HHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccCc
Confidence            99999999999988 99999999999999987654322 1111111 223578899999999999999999988999999


Q ss_pred             EEEeCCCccc
Q 025273          244 TLVVAGGMPS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      .+.+|||+..
T Consensus       237 ~i~vdgg~~~  246 (261)
T PRK08265        237 DYAVDGGYSA  246 (261)
T ss_pred             EEEECCCeec
Confidence            9999999754

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-44  Score=294.46  Aligned_cols=240  Identities=28%  Similarity=0.327  Sum_probs=208.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||++|||++++++|+++|++|++++|+.+.++...+++... .++.++++|+++.++++++++++.+.++++|+
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY-GEVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            36999999999999999999999999999999998888887777554 36888999999999999999999999999999


Q ss_pred             EEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           93 VVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        93 lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      +|||||.... ..++.+.+.++|.+.+++|+.+++.+.+.+++.|.   +.++||++||..+..+.++...|+++|+|++
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~  159 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLV  159 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHH
Confidence            9999997531 34567788899999999999999999999998763   3579999999999988899999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc---------CChh-HHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT---------SNDG-VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +|+++++.|+.+ ||++|+|+||+++|++.+...         ..+. .........|.+|+++|+|+++++.||+++..
T Consensus       160 ~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~  239 (259)
T PRK08340        160 QLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENA  239 (259)
T ss_pred             HHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCccc
Confidence            999999999988 999999999999999864321         1111 12233445688999999999999999999999


Q ss_pred             CCccccEEEeCCCccc
Q 025273          238 SYITGETLVVAGGMPS  253 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~  253 (255)
                      ++++|+++.+|||...
T Consensus       240 ~~itG~~i~vdgg~~~  255 (259)
T PRK08340        240 EYMLGSTIVFDGAMTR  255 (259)
T ss_pred             ccccCceEeecCCcCC
Confidence            9999999999999865

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-44  Score=298.79  Aligned_cols=237  Identities=26%  Similarity=0.337  Sum_probs=206.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc---------hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ---------KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNL   79 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   79 (255)
                      .+++|++|||||++|||++++++|+++|++|++++|+.         +.++.+.+++...+.++.++++|+++.++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            36799999999999999999999999999999999876         667777777776677888999999999999999


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--------CCeEEEEcccCcc
Q 025273           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGY  151 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~iv~iss~~~~  151 (255)
                      ++++.+.+|++|++|||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++        .++||++||..+.
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence            9999999999999999999865 467788999999999999999999999999998852        2699999999999


Q ss_pred             CCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccC--CCCCHHHHHHH
Q 025273          152 QPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLN--RLGTTRDMAAA  228 (255)
Q Consensus       152 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~a~~  228 (255)
                      .+.+.+..|+++|+|+++|+++++.|+.+ +||||+|+|| ++|++.....      .......+.+  +..+|+|+++.
T Consensus       162 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~------~~~~~~~~~~~~~~~~pedva~~  234 (286)
T PRK07791        162 QGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF------AEMMAKPEEGEFDAMAPENVSPL  234 (286)
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH------HHHHhcCcccccCCCCHHHHHHH
Confidence            99999999999999999999999999988 9999999999 7888753211      1111122222  35799999999


Q ss_pred             HHHhcCCCCCCccccEEEeCCCccc
Q 025273          229 AAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       229 ~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++||+++...+++|+++.+|||+..
T Consensus       235 ~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        235 VVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             HHHHhCchhcCCCCcEEEEcCCceE
Confidence            9999999889999999999999753

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-44  Score=300.94  Aligned_cols=247  Identities=26%  Similarity=0.301  Sum_probs=197.6

Q ss_pred             ccccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHH----------hcCC-----eEEEEEe
Q 025273            6 MAKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK----------ARGI-----EVIGVVC   68 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~-----~~~~~~~   68 (255)
                      |+.+++||++||||++  +|||+++|++|+++|++|++.++.+ .++...+...          ..+.     ++..+.+
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA   80 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence            4567899999999995  9999999999999999999987642 1111100000          0011     1111223


Q ss_pred             cCCCH------------------HHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCccCCCHHHHHHHHHHHhHHHHHHH
Q 025273           69 HVSNG------------------QQRKNLINQTIEKFGKIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLL  129 (255)
Q Consensus        69 Dv~~~------------------~~v~~~~~~~~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~  129 (255)
                      |+++.                  ++++++++++.+++|++|+||||||... ...++.+.+.++|++.+++|+.|++.++
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            33333                  4689999999999999999999999753 2467889999999999999999999999


Q ss_pred             HHHhhcccCCCeEEEEcccCccCCCCCCh-hhHhhHHHHHHHHHHHHHHhCC--CeeEEEEeCCcccCCccccccCChhH
Q 025273          130 QDAAPHLQKGSSVVLISSIAGYQPQSSMA-MYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAEYITSNDGV  206 (255)
Q Consensus       130 ~~~~~~~~~~~~iv~iss~~~~~~~~~~~-~y~~sK~a~~~l~~~la~e~~~--~v~v~~v~pg~v~t~~~~~~~~~~~~  206 (255)
                      ++++|+|++.++|++++|..+..+.+.+. .|+++|+|+++|+++|+.|+.+  |||||+|+||+++|++.......+..
T Consensus       161 ~a~~p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~  240 (299)
T PRK06300        161 SHFGPIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERM  240 (299)
T ss_pred             HHHHHHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHH
Confidence            99999998888999999999888887765 8999999999999999999964  89999999999999986543222333


Q ss_pred             HHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          207 RQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       207 ~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ........+.++..+|+|++..+.|++++...+++|+++.+|||+..
T Consensus       241 ~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  287 (299)
T PRK06300        241 VDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANV  287 (299)
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcce
Confidence            33344456778899999999999999999999999999999999764

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=4.7e-44  Score=293.30  Aligned_cols=234  Identities=32%  Similarity=0.477  Sum_probs=205.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+....           .++.+++||++++++++++++++.+.+
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~   70 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY   70 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999986431           267889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.+++..|+++|+
T Consensus        71 ~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  149 (258)
T PRK06398         71 GRIDILVNNAGIES-YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKH  149 (258)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHH
Confidence            99999999999864 56788899999999999999999999999999985  4689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC-----Chh-H---HHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS-----NDG-V---RQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~-----~~~-~---~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      |++.|+++++.|+.++|++|+|+||+++|++......     .+. .   ........+.+++.+|+|+++.+.||+++.
T Consensus       150 al~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~  229 (258)
T PRK06398        150 AVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDL  229 (258)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999878999999999999998754321     111 1   112234467888999999999999999998


Q ss_pred             CCCccccEEEeCCCccc
Q 025273          237 ASYITGETLVVAGGMPS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      ..+++|+++.+|||+..
T Consensus       230 ~~~~~G~~i~~dgg~~~  246 (258)
T PRK06398        230 ASFITGECVTVDGGLRA  246 (258)
T ss_pred             cCCCCCcEEEECCcccc
Confidence            89999999999999764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.4e-43  Score=288.83  Aligned_cols=243  Identities=33%  Similarity=0.510  Sum_probs=211.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+..  +...+.+...+.++.++++|+++.++++++++++.+.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999999752  345555555566889999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.+   .++||++||..++.+.+....|+++|+
T Consensus        80 ~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  158 (248)
T TIGR01832        80 HIDILVNNAGIIR-RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKH  158 (248)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHH
Confidence            9999999999865 356678889999999999999999999999998852   479999999998888888899999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.++++++.|+.+ +|++|+|+||+++|++..................+.+++.+|+|+++++.+++++...+++|++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (248)
T TIGR01832       159 GVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYT  238 (248)
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcE
Confidence            999999999999988 9999999999999998765433323223334456778999999999999999998889999999


Q ss_pred             EEeCCCcccC
Q 025273          245 LVVAGGMPSR  254 (255)
Q Consensus       245 i~~dgG~~~~  254 (255)
                      +.+|||+..|
T Consensus       239 i~~dgg~~~~  248 (248)
T TIGR01832       239 LAVDGGWLAR  248 (248)
T ss_pred             EEeCCCEecC
Confidence            9999998654

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.5e-43  Score=287.81  Aligned_cols=238  Identities=28%  Similarity=0.415  Sum_probs=208.9

Q ss_pred             ccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCC-----------chhHHHHHHHHHhcCCeEEEEEecCCCHH
Q 025273            8 KRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRK-----------QKNVDEAVVKLKARGIEVIGVVCHVSNGQ   74 (255)
Q Consensus         8 ~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   74 (255)
                      .+++||++|||||+  +|||++++++|+++|++|++++|+           .+..+...+++...+.++.++++|+++.+
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~   81 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND   81 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            46899999999999  599999999999999999988643           22233455556666778999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccC
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQ  152 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~  152 (255)
                      +++++++++.+.+|++|++|||||... ..++.+.+.++|++++++|+.+++.+.+.++|.|+  ++++||++||..+..
T Consensus        82 ~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  160 (256)
T PRK12859         82 APKELLNKVTEQLGYPHILVNNAAYST-NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG  160 (256)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence            999999999999999999999999865 46788899999999999999999999999999986  467999999999999


Q ss_pred             CCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHH
Q 025273          153 PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF  231 (255)
Q Consensus       153 ~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  231 (255)
                      +.+++..|+++|++++.|+++++.++.+ +|++++|+||+++|++..     ......+....+.+++.+|+|+++.+.|
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~-----~~~~~~~~~~~~~~~~~~~~d~a~~~~~  235 (256)
T PRK12859        161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT-----EEIKQGLLPMFPFGRIGEPKDAARLIKF  235 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            8999999999999999999999999988 999999999999998643     2333344556677888899999999999


Q ss_pred             hcCCCCCCccccEEEeCCCc
Q 025273          232 LASDDASYITGETLVVAGGM  251 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ++++...+++|+++.+|||+
T Consensus       236 l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        236 LASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HhCccccCccCcEEEeCCCc
Confidence            99998899999999999995

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=5.6e-43  Score=286.78  Aligned_cols=245  Identities=31%  Similarity=0.468  Sum_probs=220.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...  +.++.++++|++++++++++++++.+
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888887777655  56899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|++|||+|... ..+..+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.+....|+++
T Consensus        85 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~s  163 (257)
T PRK09242         85 HWDGLHILVNNAGGNI-RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMT  163 (257)
T ss_pred             HcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHH
Confidence            9999999999999854 45677889999999999999999999999999985  45799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |++++.++++++.|+.+ +|++++|+||+++|++.......+..........+.+++.+|+|++..+.|++++...+++|
T Consensus       164 K~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g  243 (257)
T PRK09242        164 KAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITG  243 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccC
Confidence            99999999999999987 99999999999999998766555555555556678888999999999999999988888999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.+.+|||...
T Consensus       244 ~~i~~~gg~~~  254 (257)
T PRK09242        244 QCIAVDGGFLR  254 (257)
T ss_pred             CEEEECCCeEe
Confidence            99999999754

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-43  Score=286.22  Aligned_cols=245  Identities=29%  Similarity=0.433  Sum_probs=214.1

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ..++++|++|||||+++||++++++|+++|+.|++++|+. +..+...+++...+.++.++++|+++.++++++++.+.+
T Consensus         2 ~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          2 YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            3458899999999999999999999999999999988854 445556666666667888999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      .++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.+++.|++   .++||++||..+..+.+++..|++
T Consensus        82 ~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  160 (261)
T PRK08936         82 EFGTLDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAA  160 (261)
T ss_pred             HcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHH
Confidence            9999999999999765 466778899999999999999999999999998852   479999999999889999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +|+|++.++++++.++.+ +|++++|+||+++|++.......+..........+.+++.+|+|+++.+.||+++...+++
T Consensus       161 sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  240 (261)
T PRK08936        161 SKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVT  240 (261)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcc
Confidence            999999999999999987 9999999999999998654333333333344556788899999999999999999999999


Q ss_pred             ccEEEeCCCcc
Q 025273          242 GETLVVAGGMP  252 (255)
Q Consensus       242 G~~i~~dgG~~  252 (255)
                      |+++.+|||+.
T Consensus       241 G~~i~~d~g~~  251 (261)
T PRK08936        241 GITLFADGGMT  251 (261)
T ss_pred             CcEEEECCCcc
Confidence            99999999976

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-43  Score=287.08  Aligned_cols=242  Identities=26%  Similarity=0.405  Sum_probs=209.8

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +++++|++||||+++|||++++++|+++|++|++++|+.+.++...+++... +.++.++++|+++++++++++++    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            3578999999999999999999999999999999999998888877777654 55788999999999999888764    


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++|||+|... ..++.+.+.++|++++++|+.+++.++++++|.|+  +.++||++||..+..+.+.+..|+++|
T Consensus        79 ~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask  157 (259)
T PRK06125         79 AGDIDILVNNAGAIP-GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGN  157 (259)
T ss_pred             hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHH
Confidence            578999999999864 56788899999999999999999999999999996  347999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc--------CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT--------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      +|+++|+++++.|+.+ +||||+|+||+++|++.....        ..+.....+....+.+++.+|+|+++.+.||+++
T Consensus       158 ~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  237 (259)
T PRK06125        158 AALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASP  237 (259)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999988 999999999999999754321        1122222333455778899999999999999998


Q ss_pred             CCCCccccEEEeCCCcccC
Q 025273          236 DASYITGETLVVAGGMPSR  254 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~~  254 (255)
                      ..+++||+.+.+|||...+
T Consensus       238 ~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        238 RSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             hhccccCceEEecCCeeec
Confidence            8899999999999998764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.4e-43  Score=291.13  Aligned_cols=241  Identities=29%  Similarity=0.456  Sum_probs=203.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.++.+.+.   .+.++.++++|+++.++++++++++.+.+++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999999999998766554432   2457888999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCH----HHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           90 IDVVVSNAAANPSVDSILQTKE----SVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|||||......++.+.+.    ++|++.+++|+.+++.++++++|.|. .++++|+++|..+..+.+....|+++|
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  159 (262)
T TIGR03325        80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAK  159 (262)
T ss_pred             CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHHH
Confidence            9999999997542334444433    57999999999999999999999985 457899999999988888889999999


Q ss_pred             HHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc---CC-----hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT---SN-----DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      +|+++|+++++.|+.+.||||+|+||+++|++.....   ..     ....+......|++|+.+|+|+++.+.|++++.
T Consensus       160 aa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~  239 (262)
T TIGR03325       160 HAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRG  239 (262)
T ss_pred             HHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCC
Confidence            9999999999999987899999999999999864321   11     112233344568899999999999999999874


Q ss_pred             -CCCccccEEEeCCCccc
Q 025273          237 -ASYITGETLVVAGGMPS  253 (255)
Q Consensus       237 -~~~~~G~~i~~dgG~~~  253 (255)
                       ..+++|+++.+|||+..
T Consensus       240 ~~~~~tG~~i~vdgg~~~  257 (262)
T TIGR03325       240 DTVPATGAVLNYDGGMGV  257 (262)
T ss_pred             CcccccceEEEecCCeee
Confidence             56899999999999765

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-42  Score=286.29  Aligned_cols=248  Identities=35%  Similarity=0.482  Sum_probs=216.6

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |.+++++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++++|++++++++++++++
T Consensus         1 ~~~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   80 (264)
T PRK07576          1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQI   80 (264)
T ss_pred             CCccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHH
Confidence            56677899999999999999999999999999999999999988877777777666667888999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHh
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      .+.++++|++|||||... ..++.+.+.++|++.+++|+.+++++++++++.|+ ++++|+++||..+..+.+....|++
T Consensus        81 ~~~~~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~a  159 (264)
T PRK07576         81 ADEFGPIDVLVSGAAGNF-PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCA  159 (264)
T ss_pred             HHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHH
Confidence            999999999999998754 46677888999999999999999999999999886 5579999999998888889999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCccc-CCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVP-THFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +|++++.|+++++.|+.+ +|+++.|+||+++ |+......+.+..........+.++..+|+|+++.+.+++++...++
T Consensus       160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  239 (264)
T PRK07576        160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYI  239 (264)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCc
Confidence            999999999999999987 9999999999997 55443333333333334445677888999999999999999888899


Q ss_pred             cccEEEeCCCcc
Q 025273          241 TGETLVVAGGMP  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      +|+.+.+|||+.
T Consensus       240 ~G~~~~~~gg~~  251 (264)
T PRK07576        240 TGVVLPVDGGWS  251 (264)
T ss_pred             cCCEEEECCCcc
Confidence            999999999974

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-43  Score=284.83  Aligned_cols=236  Identities=35%  Similarity=0.518  Sum_probs=208.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.        ...+.++.++++|+++.++++++++.+.+.++
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   74 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERHG   74 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999998654        12245788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.+.+.|.+   .++||++||..+..+.+....|+++|+
T Consensus        75 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  153 (252)
T PRK07856         75 RLDVLVNNAGGSP-YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKA  153 (252)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHH
Confidence            9999999999764 456778889999999999999999999999998853   479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       166 a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++.|++.++.|+.+.|++++|+||+++|++.......+..........+.+++.+|+|+++.+.||+++..++++|+.|
T Consensus       154 a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i  233 (252)
T PRK07856        154 GLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANL  233 (252)
T ss_pred             HHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEE
Confidence            99999999999997779999999999999986544333333344555667888999999999999999998899999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||...
T Consensus       234 ~vdgg~~~  241 (252)
T PRK07856        234 EVHGGGER  241 (252)
T ss_pred             EECCCcch
Confidence            99999765

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-43  Score=293.80  Aligned_cols=240  Identities=24%  Similarity=0.329  Sum_probs=197.0

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc----------hhHHHHHHHHHhcCCeEEEEEecCCCHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ----------KNVDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (255)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+.          +.++.+.+++...+.++.+++||++++++
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            45668999999999999999999999999999999999984          34555666666556678899999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcC-CCCC---CCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccC
Q 025273           76 RKNLINQTIEKFGKIDVVVSNA-AANP---SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIA  149 (255)
Q Consensus        76 v~~~~~~~~~~~g~~d~lv~~a-g~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~  149 (255)
                      ++++++++.+.+|++|++|||| |...   ...++.+.+.++|++.+++|+.+++.++++++|+|+  ++++||++||..
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            9999999999999999999999 7531   125677788899999999999999999999999995  358999999976


Q ss_pred             ccC---CCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc--CChhHHHHHHhhcc-cCCCCCH
Q 025273          150 GYQ---PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT--SNDGVRQTIEQNTL-LNRLGTT  222 (255)
Q Consensus       150 ~~~---~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~  222 (255)
                      +..   +.+....|+++|+|+.+|+++|+.|+.+ |||||+|+||+++|++.....  ......... ...+ .++..+|
T Consensus       162 ~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~p  240 (305)
T PRK08303        162 AEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDAL-AKEPHFAISETP  240 (305)
T ss_pred             ccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhh-ccccccccCCCH
Confidence            542   2345678999999999999999999998 999999999999999854321  111111111 1234 4667789


Q ss_pred             HHHHHHHHHhcCCCC-CCccccEEE
Q 025273          223 RDMAAAAAFLASDDA-SYITGETLV  246 (255)
Q Consensus       223 ~d~a~~~~~l~s~~~-~~~~G~~i~  246 (255)
                      +|++..+.||+++.. .+++|+++.
T Consensus       241 eevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        241 RYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHHHHHHcCcchhhcCCcEEE
Confidence            999999999999874 589999865

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-42  Score=283.43  Aligned_cols=241  Identities=27%  Similarity=0.405  Sum_probs=211.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ||++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++++|++++++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            58999999999999999999999999999999998888877777766567899999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ++|||+|... ..++.+.+.++|++++++|+.+++++++++++.|.   ..++|+++||..+..+.+....|+++|+|++
T Consensus        81 ~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~  159 (252)
T PRK07677         81 ALINNAAGNF-ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL  159 (252)
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence            9999999754 45677889999999999999999999999999874   2479999999999888888899999999999


Q ss_pred             HHHHHHHHHhCC--CeeEEEEeCCcccCC-ccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          169 GLTKALAAEMAP--DTRVNCVAPGFVPTH-FAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       169 ~l~~~la~e~~~--~v~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      +|+++++.|+.+  ||++++|+||+++|+ +.......+..........+.+++.+|+|+++.+.|++++...+++|+++
T Consensus       160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  239 (252)
T PRK07677        160 AMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCI  239 (252)
T ss_pred             HHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEE
Confidence            999999999864  999999999999964 33322233444445555667888999999999999999988889999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||.+.
T Consensus       240 ~~~gg~~~  247 (252)
T PRK07677        240 TMDGGQWL  247 (252)
T ss_pred             EECCCeec
Confidence            99999764

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.6e-42  Score=283.95  Aligned_cols=240  Identities=36%  Similarity=0.523  Sum_probs=212.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||++|||++++++|+++|++|++++|+.+.++....++...+.++.++++|++++++++++++++.+.++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999999888888888776667888999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ++|||||+.. ..++.+.+.++|++++++|+.+++.+++.+++.|++   +++||++||..+..+.+....|+++|++++
T Consensus        82 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (256)
T PRK08643         82 VVVNNAGVAP-TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR  160 (256)
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence            9999999865 466778889999999999999999999999998752   479999999999888888999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC--------ChhH-HHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--------NDGV-RQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      .|++.++.|+.+ ||+|++|+||+++|++......        .+.. ...+....+.+++.+|+|+++.+.||+++...
T Consensus       161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~  240 (256)
T PRK08643        161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSD  240 (256)
T ss_pred             HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999988 9999999999999998754321        1111 12233455788889999999999999999999


Q ss_pred             CccccEEEeCCCcc
Q 025273          239 YITGETLVVAGGMP  252 (255)
Q Consensus       239 ~~~G~~i~~dgG~~  252 (255)
                      ++||+++.+|||..
T Consensus       241 ~~~G~~i~vdgg~~  254 (256)
T PRK08643        241 YITGQTIIVDGGMV  254 (256)
T ss_pred             CccCcEEEeCCCee
Confidence            99999999999975

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2e-42  Score=284.73  Aligned_cols=245  Identities=27%  Similarity=0.462  Sum_probs=217.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+.++...+.+...+.++.+++||+++.++++++++++.+.++
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999999888888777776677899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++.+.+.++++|+  +.++||++||..+..+.+.+..|+++|++
T Consensus        87 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa  165 (265)
T PRK07097         87 VIDILVNNAGIIK-RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGG  165 (265)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHH
Confidence            9999999999876 46778889999999999999999999999999986  45799999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC------ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS------NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      ++.++++++.++.+ +|+|++|+||+++|++......      ............+.+++.+|+|++..+.+++++....
T Consensus       166 l~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  245 (265)
T PRK07097        166 LKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNF  245 (265)
T ss_pred             HHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccCC
Confidence            99999999999988 9999999999999997754322      1122233444557788999999999999999988889


Q ss_pred             ccccEEEeCCCcccC
Q 025273          240 ITGETLVVAGGMPSR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      ++|+.+.+|||....
T Consensus       246 ~~g~~~~~~gg~~~~  260 (265)
T PRK07097        246 VNGHILYVDGGILAY  260 (265)
T ss_pred             CCCCEEEECCCceec
Confidence            999999999997653

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1e-42  Score=284.94  Aligned_cols=240  Identities=35%  Similarity=0.518  Sum_probs=204.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++|+++||||++|||++++++|+++|++|++++++.+..   .+++...  ++.++++|++++++++++++++.+.++
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK--GVFTIKCDVGNRDQVKKSKEVVEKEFG   78 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999887765432   2233222  467889999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccC-CCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQ-PQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~-~~~~~~~y~~sK~  165 (255)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++.+++.++|.|+  +.++||++||..+.. +.++...|++||+
T Consensus        79 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKa  157 (255)
T PRK06463         79 RVDVLVNNAGIMY-LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKA  157 (255)
T ss_pred             CCCEEEECCCcCC-CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHH
Confidence            9999999999864 46777889999999999999999999999999986  467999999998874 4567788999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCCh---hHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      |+++|+++++.|+.+ +|++|+|+||+++|++.......+   ..........+.+++.+|+|+++.+.+++++...+++
T Consensus       158 a~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  237 (255)
T PRK06463        158 GIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYIT  237 (255)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCC
Confidence            999999999999988 999999999999999875432222   2333445566788899999999999999999888999


Q ss_pred             ccEEEeCCCcccC
Q 025273          242 GETLVVAGGMPSR  254 (255)
Q Consensus       242 G~~i~~dgG~~~~  254 (255)
                      |+.+.+|||....
T Consensus       238 G~~~~~dgg~~~~  250 (255)
T PRK06463        238 GQVIVADGGRIDN  250 (255)
T ss_pred             CCEEEECCCeeec
Confidence            9999999998653

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=3.1e-42  Score=282.11  Aligned_cols=244  Identities=31%  Similarity=0.473  Sum_probs=214.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+..+...+++...+.++.++++|+++.++++++++.+.+.++
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999999998888888777766667888999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||... ..++ +.+.++|++.+++|+.+++.+++++.+.|.  +.++||++||..+..+.++...|+++|+|
T Consensus        88 ~~d~li~~ag~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  165 (255)
T PRK06113         88 KVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAA  165 (255)
T ss_pred             CCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHH
Confidence            9999999999764 2334 678899999999999999999999999885  34699999999999998899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.|+++++.++.+ +||+|.|+||+++|++...... +..........+.++++.|+|+++++.|++++...+++|++|
T Consensus       166 ~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i  244 (255)
T PRK06113        166 ASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQIL  244 (255)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEecccccccccccccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEE
Confidence            99999999999988 9999999999999998764432 223333445567788899999999999999998899999999


Q ss_pred             EeCCCcccCC
Q 025273          246 VVAGGMPSRL  255 (255)
Q Consensus       246 ~~dgG~~~~~  255 (255)
                      .+|||...++
T Consensus       245 ~~~gg~~~~~  254 (255)
T PRK06113        245 TVSGGGVQEL  254 (255)
T ss_pred             EECCCccccC
Confidence            9999976553

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=2e-42  Score=283.91  Aligned_cols=244  Identities=32%  Similarity=0.449  Sum_probs=206.1

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      |...+++|++|||||++|||++++++|+++|++|++++|+.. .+...+++...+.++.++++|+++.++++++++++.+
T Consensus         2 ~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          2 MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            334578999999999999999999999999999999999853 4455566655567888999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|.|+  +.++||++||..++.  ....+|+++
T Consensus        81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~s  158 (260)
T PRK12823         81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAA  158 (260)
T ss_pred             HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHH
Confidence            9999999999999754356778889999999999999999999999999985  347999999987652  345689999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc------C-----ChhHHHHHHhhcccCCCCCHHHHHHHHHH
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT------S-----NDGVRQTIEQNTLLNRLGTTRDMAAAAAF  231 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~------~-----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  231 (255)
                      |+|++.|+++++.|+.+ +|++++|+||+++|++.....      .     .+..........+++++++|+|+++.+.|
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  238 (260)
T PRK12823        159 KGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILF  238 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHH
Confidence            99999999999999988 999999999999998632110      0     01222233445678889999999999999


Q ss_pred             hcCCCCCCccccEEEeCCCcc
Q 025273          232 LASDDASYITGETLVVAGGMP  252 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++++...+++|+.+++|||..
T Consensus       239 l~s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        239 LASDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             HcCcccccccCcEEeecCCCC
Confidence            999988899999999999963

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.1e-43  Score=312.59  Aligned_cols=242  Identities=28%  Similarity=0.452  Sum_probs=214.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++..+++|++++++++++++++.+.+|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999999988777666544   45778899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ++|++|||||......++.+.+.++|++++++|+.+++++++.++|+|+++++||++||.++..+.+++..|+++|++++
T Consensus       343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~  422 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVT  422 (520)
T ss_pred             CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHH
Confidence            99999999998654567788899999999999999999999999999987789999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC-hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +|+++++.|+.+ |||||+|+||+++|++....... ...........+.+++.+|+|+++.+.||+++...+++|+.+.
T Consensus       423 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~  502 (520)
T PRK06484        423 MLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLT  502 (520)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEE
Confidence            999999999988 99999999999999987654322 2222334455678889999999999999999988999999999


Q ss_pred             eCCCccc
Q 025273          247 VAGGMPS  253 (255)
Q Consensus       247 ~dgG~~~  253 (255)
                      +|||+..
T Consensus       503 vdgg~~~  509 (520)
T PRK06484        503 VDGGWTA  509 (520)
T ss_pred             ECCCccC
Confidence            9999753

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-42  Score=287.65  Aligned_cols=231  Identities=25%  Similarity=0.406  Sum_probs=197.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++||||+ ||||++++++|+ +|++|++++|+.+.++...+++...+.++.+++||+++.++++++++++ +.++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            689999998 699999999996 8999999999988887777777665678899999999999999999988 5688999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC-----------------
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------------  154 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------------  154 (255)
                      ++|||||+..        ..++|++++++|+.+++++++.+.|.|++++++|++||..+..+.                 
T Consensus        79 ~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~  150 (275)
T PRK06940         79 GLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEE  150 (275)
T ss_pred             EEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccc
Confidence            9999999742        235699999999999999999999999877889999998876542                 


Q ss_pred             -------------CCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-C-hhHHHHHHhhcccCC
Q 025273          155 -------------SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-N-DGVRQTIEQNTLLNR  218 (255)
Q Consensus       155 -------------~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-~-~~~~~~~~~~~~~~~  218 (255)
                                   +++..|++||+|++.++++++.|+.+ +||||+|+||+++|++...... . ++.........+.++
T Consensus       151 ~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r  230 (275)
T PRK06940        151 LLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGR  230 (275)
T ss_pred             ccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCccc
Confidence                         24678999999999999999999988 9999999999999998643221 1 122233444567889


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          219 LGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       219 ~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++|+|+++.+.||+++..++++|+.+.+|||...
T Consensus       231 ~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        231 PGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             CCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence            99999999999999999999999999999999753

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=6.6e-43  Score=279.82  Aligned_cols=221  Identities=24%  Similarity=0.370  Sum_probs=197.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++++||||||+|||.++|++|+++|++|++++|+.++++.+++++... +.++.++++|+++.++++.+.+++.+..+
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999999999999999999876 68999999999999999999999999888


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      .+|+||||||+.. .+++.+.++++.++++++|+.+.+.++++++|.|.  +.|.|||++|.+++.|.+.+..|+++|++
T Consensus        84 ~IdvLVNNAG~g~-~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~  162 (265)
T COG0300          84 PIDVLVNNAGFGT-FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAF  162 (265)
T ss_pred             cccEEEECCCcCC-ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHH
Confidence            9999999999876 67999999999999999999999999999999996  46899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +.+|+++|+.|+.+ ||+|..++||++.|++.. .. ..+.    ....+...+.+|+++++.....+....
T Consensus       163 v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~~-~~~~----~~~~~~~~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         163 VLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-AK-GSDV----YLLSPGELVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCcccccccc-cc-cccc----ccccchhhccCHHHHHHHHHHHHhcCC
Confidence            99999999999988 999999999999999985 11 1110    111133447799999999888886544

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-42  Score=282.04  Aligned_cols=245  Identities=31%  Similarity=0.491  Sum_probs=221.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|+++||||+++||++++++|+++|++|++++|+.+.++...+++...+.++.+++||+++++++.++++++.+.+
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            44789999999999999999999999999999999999888888877777667789999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +++|++|||+|... ..++.+.+.++|++.+++|+.+++.+.+.+++.|+  +.+++|++||..+..+.+....|+++|+
T Consensus        87 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~  165 (256)
T PRK06124         87 GRLDILVNNVGARD-RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQ  165 (256)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHH
Confidence            99999999999865 46788889999999999999999999999999885  4679999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.+++.++.|+.+ +|+++.|+||+++|++.......+.....+....+.+++.+|+|++..+.+++++...+++|+.
T Consensus       166 a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~  245 (256)
T PRK06124        166 GLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHV  245 (256)
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCE
Confidence            999999999999987 9999999999999998655444455555566667888999999999999999999999999999


Q ss_pred             EEeCCCccc
Q 025273          245 LVVAGGMPS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +.+|||+..
T Consensus       246 i~~dgg~~~  254 (256)
T PRK06124        246 LAVDGGYSV  254 (256)
T ss_pred             EEECCCccc
Confidence            999999764

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-42  Score=282.90  Aligned_cols=240  Identities=30%  Similarity=0.466  Sum_probs=213.0

Q ss_pred             CCCCEEEEEcCCC-chHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-C-CeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQ-GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-G-IEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        10 l~~k~vlItGa~~-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +++|++|||||+| |||+++++.|+++|++|++++|+.+.++...+++... + .++.++++|++++++++++++++.+.
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5689999999985 9999999999999999999999988888777777653 3 47889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.++|.|++   .++|+++||..+..+.++...|+++
T Consensus        95 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  173 (262)
T PRK07831         95 LGRLDVLVNNAGLGG-QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAA  173 (262)
T ss_pred             cCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHH
Confidence            999999999999765 467788899999999999999999999999998862   5799999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|+++++++++.|+.+ +||||+|+||+++|++..... .++.........+++++.+|+|+++.+.||+++...+++|
T Consensus       174 Kaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG  252 (262)
T PRK07831        174 KAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT-SAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTG  252 (262)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCC
Confidence            99999999999999988 999999999999999875432 2333444455667889999999999999999999999999


Q ss_pred             cEEEeCCCc
Q 025273          243 ETLVVAGGM  251 (255)
Q Consensus       243 ~~i~~dgG~  251 (255)
                      +++.+|+++
T Consensus       253 ~~i~v~~~~  261 (262)
T PRK07831        253 EVVSVSSQH  261 (262)
T ss_pred             ceEEeCCCC
Confidence            999999976

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-42  Score=283.25  Aligned_cols=241  Identities=32%  Similarity=0.501  Sum_probs=210.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++|++|||||+++||++++++|+++|++|++++|+.+..+...+++   ..++.++++|++++++++++++++.+.++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERFG   79 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            477999999999999999999999999999999999988777665544   34688899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.+.|.+   +++||++||..+..+.++...|++||+
T Consensus        80 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  158 (257)
T PRK07067         80 GIDILFNNAALFD-MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKA  158 (257)
T ss_pred             CCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHH
Confidence            9999999999865 467778889999999999999999999999998842   479999999988888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---------ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      +++.++++++.|+.+ +|+++.|+||+++|++......         ............+.+++.+|+|+++.+.+++++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  238 (257)
T PRK07067        159 AVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASA  238 (257)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCc
Confidence            999999999999988 9999999999999997643210         112223344566889999999999999999999


Q ss_pred             CCCCccccEEEeCCCccc
Q 025273          236 DASYITGETLVVAGGMPS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      ...+++|+++++|||...
T Consensus       239 ~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        239 DADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             ccccccCcEEeecCCEeC
Confidence            889999999999999764

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.9e-43  Score=282.12  Aligned_cols=192  Identities=30%  Similarity=0.488  Sum_probs=177.2

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CC-eEEEEEecCCCHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GI-EVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +.+++||+|+|||||+|||.++|++|+++|++++++.|...+++.+++++.+. .. ++.+++||++|+++++++++++.
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999999998888776 33 59999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHh
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      ..||++|+||||||+.. .......+.+++.+.|++|++|++.++++++|+|++  .|+||++||++|+.+.|..+.|++
T Consensus        87 ~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~A  165 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSA  165 (282)
T ss_pred             HhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccch
Confidence            99999999999999988 777888889999999999999999999999999973  399999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-C--eeEEEEeCCcccCCccccc
Q 025273          163 TKTALLGLTKALAAEMAP-D--TRVNCVAPGFVPTHFAEYI  200 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~--v~v~~v~pg~v~t~~~~~~  200 (255)
                      ||+|+.+|+.+|+.|+.+ +  |++ .|+||+|+|++....
T Consensus       166 SK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  166 SKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             HHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence            999999999999999987 4  677 999999999976544

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-42  Score=281.09  Aligned_cols=243  Identities=33%  Similarity=0.508  Sum_probs=209.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+ .....+++...+.++.++++|++++++++++++++.+.++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999875 3444445544466888999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCc-cCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAG-YQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~-~~~~~~~~~y~~sK~  165 (255)
                      ++|++|||||... ..++.+.+.+++++.+++|+.+++.+.+.++++++  +.++||++||..+ ..+.+.+..|+++|+
T Consensus        82 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~  160 (263)
T PRK08226         82 RIDILVNNAGVCR-LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA  160 (263)
T ss_pred             CCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHH
Confidence            9999999999865 56778888999999999999999999999999875  3579999999877 456677889999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC------ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS------NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      +++.++++++.++.+ +|++++|+||+++|++......      ............|.+++.+|+|+++.+.||+++...
T Consensus       161 a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~  240 (263)
T PRK08226        161 AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESS  240 (263)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhc
Confidence            999999999999987 9999999999999998754421      122334445556788899999999999999999889


Q ss_pred             CccccEEEeCCCccc
Q 025273          239 YITGETLVVAGGMPS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      +++|+++.+|||...
T Consensus       241 ~~~g~~i~~dgg~~~  255 (263)
T PRK08226        241 YLTGTQNVIDGGSTL  255 (263)
T ss_pred             CCcCceEeECCCccc
Confidence            999999999999753

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-41  Score=282.74  Aligned_cols=245  Identities=31%  Similarity=0.484  Sum_probs=214.7

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++++|++|||||+++||++++++|+++|++|++++|+.+ ..+...+.+...+.++.++.+|+++.++++++++++.+.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4577899999999999999999999999999999999864 344555555555678899999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++++|++|||||......++.+.+.++|++.+++|+.+++.+++++.+.|++.++||++||..++.+.+....|+++|+|
T Consensus       122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a  201 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGA  201 (290)
T ss_pred             cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHH
Confidence            99999999999986545677889999999999999999999999999998877899999999999888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.++++++.++.+ +|++++|+||+++|++...... +.....+....+.+++..|+|+++++++++++...+++|+.+
T Consensus       202 ~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i  280 (290)
T PRK06701        202 IHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD-EEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQML  280 (290)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence            99999999999987 9999999999999997654322 222333445567788999999999999999998889999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||+..
T Consensus       281 ~idgg~~~  288 (290)
T PRK06701        281 HVNGGVIV  288 (290)
T ss_pred             EeCCCccc
Confidence            99999865

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-41  Score=277.84  Aligned_cols=239  Identities=31%  Similarity=0.445  Sum_probs=210.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +|++|||||++|||++++++|+++|++|+++++ +.+.++.+.+++...+.++.++++|+++.++++++++++.+.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999988865 5566667777777677789999999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      |++|||+|... ...+.+.+.++|++++++|+.+++.+.+++.++|.+   +++||++||..+..+.++...|+++|+++
T Consensus        82 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  160 (256)
T PRK12743         82 DVLVNNAGAMT-KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL  160 (256)
T ss_pred             CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence            99999999865 356778899999999999999999999999998852   47999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.++++++.++.+ +|++++|+||+++|++....  ..+.........+.++..+|+|+++.+.|++++...+++|+++.
T Consensus       161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  238 (256)
T PRK12743        161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGMD--DSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLI  238 (256)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEE
Confidence            9999999999988 99999999999999986532  22333334445677888999999999999999988999999999


Q ss_pred             eCCCccc
Q 025273          247 VAGGMPS  253 (255)
Q Consensus       247 ~dgG~~~  253 (255)
                      +|||...
T Consensus       239 ~dgg~~~  245 (256)
T PRK12743        239 VDGGFML  245 (256)
T ss_pred             ECCCccc
Confidence            9999653

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=1.6e-41  Score=277.86  Aligned_cols=242  Identities=29%  Similarity=0.458  Sum_probs=208.8

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..++||++|||||+++||++++++|+++|++|++++|+.++.+...+++   +.++.++++|+++.++++++++++.+.+
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQF   82 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4588999999999999999999999999999999999877655544333   4578899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|++|||||.... ..++.+.+.++|++.+++|+.+++.+++++.|.|+ +.++||++||..+..+.+....|+++|+
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKa  162 (255)
T PRK05717         83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKG  162 (255)
T ss_pred             CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHH
Confidence            999999999998643 35677889999999999999999999999999885 4579999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       166 a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++.++++++.++.++|++++|+||+++|++..... ............+.++.++|+|++..+.+++++...+++|+.+
T Consensus       163 a~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  241 (255)
T PRK05717        163 GLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEF  241 (255)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEEecccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEE
Confidence            999999999999987899999999999998754321 1222222233457788999999999999999888889999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||...
T Consensus       242 ~~~gg~~~  249 (255)
T PRK05717        242 VVDGGMTR  249 (255)
T ss_pred             EECCCceE
Confidence            99999764

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=9.8e-42  Score=282.80  Aligned_cols=244  Identities=32%  Similarity=0.426  Sum_probs=205.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+..+...+++. .+.++.++++|+++.++++++++++.+.++
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999999877666666553 245788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++|++|||||.... ..++.+.+.++|++++++|+.+++++++++++.|.  +.++|+++||..+..+.+....|+++|+
T Consensus        94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  173 (280)
T PLN02253         94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKH  173 (280)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHH
Confidence            99999999998642 34577889999999999999999999999999884  4579999999998877777889999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChh----HH----HHHHhhcc-cCCCCCHHHHHHHHHHhcCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG----VR----QTIEQNTL-LNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~----~~----~~~~~~~~-~~~~~~~~d~a~~~~~l~s~  235 (255)
                      +++.++++++.|+.+ +|++++++||+++|++.....+...    ..    .......+ .++..+|+|++..+.|++++
T Consensus       174 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~  253 (280)
T PLN02253        174 AVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASD  253 (280)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCc
Confidence            999999999999988 9999999999999987543222111    11    01111112 24567999999999999999


Q ss_pred             CCCCccccEEEeCCCccc
Q 025273          236 DASYITGETLVVAGGMPS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      ...+++|+++.+|||...
T Consensus       254 ~~~~i~G~~i~vdgG~~~  271 (280)
T PLN02253        254 EARYISGLNLMIDGGFTC  271 (280)
T ss_pred             ccccccCcEEEECCchhh
Confidence            999999999999999764

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-41  Score=278.05  Aligned_cols=244  Identities=32%  Similarity=0.467  Sum_probs=214.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|++++++++.+++++.+.+++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999999998888887777666678899999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      +|++|||||......++.+.+.++|++.+++|+.+++.+++++.+.|+ ..++||++||..+..+.++...|+++|++++
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~  162 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALL  162 (258)
T ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHHH
Confidence            999999999865456777889999999999999999999999999885 3569999999999989999999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc---------CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT---------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      .++++++.++.+ +|+++.++||++.|++.....         ..+..........+.+++.+|+|+++.+.+++++...
T Consensus       163 ~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~  242 (258)
T PRK07890        163 AASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLAR  242 (258)
T ss_pred             HHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhhh
Confidence            999999999987 999999999999998754321         1122233333445777888999999999999998778


Q ss_pred             CccccEEEeCCCccc
Q 025273          239 YITGETLVVAGGMPS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      +++|+++.+|||...
T Consensus       243 ~~~G~~i~~~gg~~~  257 (258)
T PRK07890        243 AITGQTLDVNCGEYH  257 (258)
T ss_pred             CccCcEEEeCCcccc
Confidence            899999999999753

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.2e-44  Score=263.23  Aligned_cols=240  Identities=30%  Similarity=0.378  Sum_probs=216.9

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      |..+|.|+.+++||+.-|||++++++|++.|++|+.+.|+++.+..+.++.   ..-+..++.|++..+.+.+++..+  
T Consensus         1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~v--   75 (245)
T KOG1207|consen    1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVPV--   75 (245)
T ss_pred             CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC---CcceeeeEecccHHHHHHHhhccc--
Confidence            445688999999999999999999999999999999999998777665543   456889999999988777766543  


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhhHh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                        +.+|.+|||||+.- .++|.+.+.+.|++.|++|+.+.+++.|...+.+.   ..|.||++||.++.++......|++
T Consensus        76 --~pidgLVNNAgvA~-~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYca  152 (245)
T KOG1207|consen   76 --FPIDGLVNNAGVAT-NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCA  152 (245)
T ss_pred             --Cchhhhhccchhhh-cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEee
Confidence              58999999999865 78999999999999999999999999999655432   3567999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +|+|+.+++|+++.|+++ +||+|++.|-.+-|.|.+...+.++....+.+..|.+|+...+|++.++.||+|+.+++.+
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmtt  232 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTT  232 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCccc
Confidence            999999999999999999 9999999999999999999999988888899999999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |.++.++|||+.
T Consensus       233 GstlpveGGfs~  244 (245)
T KOG1207|consen  233 GSTLPVEGGFSN  244 (245)
T ss_pred             CceeeecCCccC
Confidence            999999999974

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-41  Score=276.55  Aligned_cols=241  Identities=34%  Similarity=0.486  Sum_probs=209.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++++|++|||||+++||++++++|+++|++|++++|+.+. ....+++.  +.++.++++|+++.++++++++++.+.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999998754 22333332  3467789999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +++|++|||+|... ..++.+.+.++|++.+++|+.+++++++.+.+.|+  ..++||++||..+..+.+....|+++|+
T Consensus        88 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  166 (255)
T PRK06841         88 GRIDILVNSAGVAL-LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA  166 (255)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence            99999999999865 46677788999999999999999999999999885  3579999999998888899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.++++++.|+.+ +|++++|+||+++|++....... ..........+.+++.+|+|+++.+++++++...+++|++
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  245 (255)
T PRK06841        167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAG-EKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGEN  245 (255)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccch-hHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCE
Confidence            999999999999987 99999999999999986543322 2223344566788999999999999999999999999999


Q ss_pred             EEeCCCccc
Q 025273          245 LVVAGGMPS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +.+|||++.
T Consensus       246 i~~dgg~~~  254 (255)
T PRK06841        246 LVIDGGYTI  254 (255)
T ss_pred             EEECCCccC
Confidence            999999864

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-41  Score=278.99  Aligned_cols=242  Identities=27%  Similarity=0.385  Sum_probs=205.3

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |.+..+++||++|||||++|||++++++|+++|++|++++|+.+..         ...++.++++|+++.++++++++++
T Consensus         1 ~~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~   71 (260)
T PRK06523          1 MSFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAV   71 (260)
T ss_pred             CCcCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHH
Confidence            4566678999999999999999999999999999999999986431         1346788999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCC-CCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCC-CChh
Q 025273           84 IEKFGKIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQS-SMAM  159 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~-~~~~  159 (255)
                      .+.++++|++|||||... ...++.+.+.++|++.+++|+.+++.+.+.++++|+  +.++||++||..+..+.+ ....
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~  151 (260)
T PRK06523         72 LERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTA  151 (260)
T ss_pred             HHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcch
Confidence            999999999999999753 235567788999999999999999999999999986  347899999999887755 7889


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---------ChhHHHH---HHhhcccCCCCCHHHHH
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDGVRQT---IEQNTLLNRLGTTRDMA  226 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~~~d~a  226 (255)
                      |+++|++++.|+++++.++.+ +|++++|+||+++|++......         .++....   .....|.+++.+|+|++
T Consensus       152 Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va  231 (260)
T PRK06523        152 YAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVA  231 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHH
Confidence            999999999999999999988 9999999999999998643211         0111111   11235778889999999


Q ss_pred             HHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          227 AAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       227 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +.+.|++++..++++|+.+.+|||...+
T Consensus       232 ~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        232 ELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             HHHHHHhCcccccccCceEEecCCccCC
Confidence            9999999998899999999999997654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1.7e-41  Score=274.57  Aligned_cols=231  Identities=22%  Similarity=0.305  Sum_probs=196.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||++|||++++++|+++|++|++++|+.++..   +++...+  +.++.+|+++.++++++++++.+.++++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id   76 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHTDGLR   76 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence            589999999999999999999999999999999876432   3333322  56789999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC----CCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      ++|||||.... ....+.+.++|++++++|+.+++.+.+.+++.|++    .++||++||..+..+.+.+..|+++|+++
T Consensus        77 ~lv~~ag~~~~-~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal  155 (236)
T PRK06483         77 AIIHNASDWLA-EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL  155 (236)
T ss_pred             EEEECCccccC-CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence            99999997643 34566788999999999999999999999999863    46999999999888888899999999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +.|+++++.|+.++||+|+|+||++.|+..    ..+..........+.++...|+|+++.+.||++  ..+++|+++.+
T Consensus       156 ~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~v  229 (236)
T PRK06483        156 DNMTLSFAAKLAPEVKVNSIAPALILFNEG----DDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYVTGRSLPV  229 (236)
T ss_pred             HHHHHHHHHHHCCCcEEEEEccCceecCCC----CCHHHHHHHhccCccccCCCHHHHHHHHHHHhc--CCCcCCcEEEe
Confidence            999999999998889999999999987532    122222333445577888999999999999996  57899999999


Q ss_pred             CCCcccC
Q 025273          248 AGGMPSR  254 (255)
Q Consensus       248 dgG~~~~  254 (255)
                      |||.+.|
T Consensus       230 dgg~~~~  236 (236)
T PRK06483        230 DGGRHLK  236 (236)
T ss_pred             CcccccC
Confidence            9998765

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-41  Score=276.05  Aligned_cols=243  Identities=25%  Similarity=0.431  Sum_probs=214.9

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ..++++|++|||||+|+||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|+++.++++++++++.+.
T Consensus         4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (258)
T PRK06949          4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE   83 (258)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            45688999999999999999999999999999999999998888887777666678899999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC----------CCeEEEEcccCccCCCCC
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----------GSSVVLISSIAGYQPQSS  156 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~~~iv~iss~~~~~~~~~  156 (255)
                      ++++|++|||+|... ..++.+.+.++|+.++++|+.+++.+.+.+.+.|.+          .+++|++||..+..+.+.
T Consensus        84 ~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  162 (258)
T PRK06949         84 AGTIDILVNNSGVST-TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ  162 (258)
T ss_pred             cCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCC
Confidence            999999999999865 456777788999999999999999999999987741          369999999998888888


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      ..+|+++|++++.+++.++.++.+ +|++++|+||+++|++....... ..........+.++++.|+|+++.+.||+++
T Consensus       163 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~  241 (258)
T PRK06949        163 IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET-EQGQKLVSMLPRKRVGKPEDLDGLLLLLAAD  241 (258)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence            999999999999999999999987 99999999999999987644322 2223445556778899999999999999999


Q ss_pred             CCCCccccEEEeCCCc
Q 025273          236 DASYITGETLVVAGGM  251 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~  251 (255)
                      .+.+++|+++.+|||+
T Consensus       242 ~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        242 ESQFINGAIISADDGF  257 (258)
T ss_pred             hhcCCCCcEEEeCCCC
Confidence            9999999999999997

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-41  Score=275.27  Aligned_cols=244  Identities=35%  Similarity=0.538  Sum_probs=216.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|++++++++++++++.+.++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47799999999999999999999999999999999998888777777766567889999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++|++||+||... ...+.+.+.+++++++++|+.+++.+.+++.+.|.   +.+++|++||..+..+.++...|+++|+
T Consensus        87 ~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~  165 (263)
T PRK07814         87 RLDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKA  165 (263)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHH
Confidence            9999999999765 45677888999999999999999999999999884   3579999999999888899999999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       166 a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++.++++++.|+.++|++++|+||++.|++..................+..+..+|+|+++.++|++++...+++|+.+
T Consensus       166 a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  245 (263)
T PRK07814        166 ALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTL  245 (263)
T ss_pred             HHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEE
Confidence            99999999999998899999999999999987654334444444444556777889999999999999988889999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||...
T Consensus       246 ~~~~~~~~  253 (263)
T PRK07814        246 EVDGGLTF  253 (263)
T ss_pred             EECCCccC
Confidence            99999754

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-42  Score=280.88  Aligned_cols=236  Identities=32%  Similarity=0.436  Sum_probs=201.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..+         ..++.++++|++++++++++++++.+.++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKFG   76 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            477999999999999999999999999999999999876532         23678899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCC--------CCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCCh
Q 025273           89 KIDVVVSNAAANPSV--------DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMA  158 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~--------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~  158 (255)
                      ++|++|||||.....        .++.+.+.++|++++++|+.+++.+++++.++|+  +.++||++||..+..+.+...
T Consensus        77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  156 (266)
T PRK06171         77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQS  156 (266)
T ss_pred             CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCc
Confidence            999999999975421        1234678899999999999999999999999986  357999999999988888999


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCccc-CCcccccc----------CChhHHHHHHh--hcccCCCCCHHH
Q 025273          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVP-THFAEYIT----------SNDGVRQTIEQ--NTLLNRLGTTRD  224 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~-t~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~d  224 (255)
                      .|+++|++++.|+++++.|+.+ +|++|.|+||+++ |++.....          ...+..+.+..  ..|++++++|+|
T Consensus       157 ~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~e  236 (266)
T PRK06171        157 CYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSE  236 (266)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHH
Confidence            9999999999999999999988 9999999999997 55532111          01122222333  568899999999


Q ss_pred             HHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          225 MAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       225 ~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++.+.||+++.+++++|++|.+|||+..
T Consensus       237 va~~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        237 VADLVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             hhhheeeeeccccccceeeEEEecCcccC
Confidence            99999999999999999999999999753

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.6e-41  Score=273.32  Aligned_cols=240  Identities=30%  Similarity=0.395  Sum_probs=203.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++|||||+||||+++++.|+++|++|++++++ .+..+.+..++   +.++.++++|+++.++++++++++.+.++
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   79 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHFG   79 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            568999999999999999999999999999887654 44444333332   35788899999999999999999999888


Q ss_pred             C-CCEEEEcCCCCC-----CCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhh
Q 025273           89 K-IDVVVSNAAANP-----SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        89 ~-~d~lv~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      . +|++|||||...     ...++.+.+.++|++.+++|+.+++.+++.+++.|.  +.++|+++||..+..+..++..|
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  159 (253)
T PRK08642         80 KPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDY  159 (253)
T ss_pred             CCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccch
Confidence            7 999999998632     124577888999999999999999999999999885  45799999998887788888899


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +++|++++.|++++++++.+ +||+|+|+||+++|+...... .+..........+.+++.+|+|+++.+.||+++...+
T Consensus       160 ~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  238 (253)
T PRK08642        160 TTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT-PDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARA  238 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC-CHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcC
Confidence            99999999999999999988 999999999999998654322 2334444556678889999999999999999998899


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+.+.+|||+..
T Consensus       239 ~~G~~~~vdgg~~~  252 (253)
T PRK08642        239 VTGQNLVVDGGLVM  252 (253)
T ss_pred             ccCCEEEeCCCeec
Confidence            99999999999753

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-40  Score=271.20  Aligned_cols=242  Identities=33%  Similarity=0.484  Sum_probs=212.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|++|||||+++||++++++|+++|++|+++.|+.+ ..+...+++...+.++.++++|+++.++++++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999988877643 3455666666567789999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +++|++|||||... ..++.+.+.++|++++++|+.+++.+++++++.|++.++|+++||..+..+.+++..|+.+|+++
T Consensus        82 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~  160 (245)
T PRK12937         82 GRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAV  160 (245)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHH
Confidence            99999999999865 46677888999999999999999999999999998778999999999988889999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.++++++.++.+ +++++.++||+++|++...... +.....+....+.++..+|+|++..+.|++++...+++|+.+.
T Consensus       161 ~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~  239 (245)
T PRK12937        161 EGLVHVLANELRGRGITVNAVAPGPVATELFFNGKS-AEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLR  239 (245)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEEE
Confidence            9999999999987 9999999999999998543222 2334445566788889999999999999999888899999999


Q ss_pred             eCCCcc
Q 025273          247 VAGGMP  252 (255)
Q Consensus       247 ~dgG~~  252 (255)
                      +|||..
T Consensus       240 ~~~g~~  245 (245)
T PRK12937        240 VNGGFA  245 (245)
T ss_pred             eCCCCC
Confidence            999963

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-41  Score=272.87  Aligned_cols=240  Identities=33%  Similarity=0.526  Sum_probs=208.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++|+++||||+++||++++++|+++|++|++++|+.+.++...+++   +.++.++++|+++.+++.++++.+.+.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999977665554443   45788899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ++|++|||||... ..++.+.+.+++++++++|+.+++.+++++.|+|++.+++++++|..+..+.+....|+.+|++++
T Consensus        80 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~  158 (249)
T PRK06500         80 RLDAVFINAGVAK-FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALL  158 (249)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHH
Confidence            9999999999765 456778899999999999999999999999999887789999999888888888999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc-CC---hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT-SN---DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      .++++++.|+.+ +|+++.++||+++|++..... ..   ...........+.+++.+|+|+++.+.+++++...+++|+
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  238 (249)
T PRK06500        159 SLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGS  238 (249)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence            999999999977 999999999999999765321 11   1222233344567788899999999999999888899999


Q ss_pred             EEEeCCCcc
Q 025273          244 TLVVAGGMP  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      .+.+|||.+
T Consensus       239 ~i~~~gg~~  247 (249)
T PRK06500        239 EIIVDGGMS  247 (249)
T ss_pred             eEEECCCcc
Confidence            999999965

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-41  Score=272.10  Aligned_cols=246  Identities=28%  Similarity=0.445  Sum_probs=217.9

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ||..+++|++|||||+|+||++++++|+++|++|++++|+.+.++...+++...+.++.++++|+++.++++++++++.+
T Consensus         1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          1 MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34557899999999999999999999999999999999998888877777766667899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|++|||+|... ...+.+.+.+++++.+++|+.+++++.+.+.+.+.+  .+++|++||..+..+.+....|+++
T Consensus        81 ~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  159 (250)
T PRK12939         81 ALGGLDGLVNNAGITN-SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVAS  159 (250)
T ss_pred             HcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHH
Confidence            9999999999999866 366778889999999999999999999999998864  6799999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |++++.+++.++.++.+ +|+++.|+||+++|++...... ...........+.+++.+|+|+++.+.+++++..++++|
T Consensus       160 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  238 (250)
T PRK12939        160 KGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-DERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTG  238 (250)
T ss_pred             HHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999977 9999999999999998765432 233444555667788899999999999999988889999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.|.+|||+..
T Consensus       239 ~~i~~~gg~~~  249 (250)
T PRK12939        239 QLLPVNGGFVM  249 (250)
T ss_pred             cEEEECCCccc
Confidence            99999999753

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-40  Score=271.57  Aligned_cols=242  Identities=33%  Similarity=0.484  Sum_probs=212.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEE-EeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVV-SSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++|||||+|+||++++++|+++|++|++ .+|+.+..+.+.+++...+.++.++++|++++++++++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35799999999999999999999999999876 57888777777777776677899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||+|... ..++.+.+.+++++.+++|+.+++.+.++++++|+  +.++||++||..+..+.++...|+++|++
T Consensus        82 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  160 (250)
T PRK08063         82 RLDVFVNNAASGV-LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAA  160 (250)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHH
Confidence            9999999999765 46778888999999999999999999999999986  35799999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.|+++++.++.+ +|++++|+||+++|++..................+.+++.+++|+++.+.+++++...+++|+.+
T Consensus       161 ~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~  240 (250)
T PRK08063        161 LEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTI  240 (250)
T ss_pred             HHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            99999999999977 99999999999999987655444444444444556677899999999999999888888999999


Q ss_pred             EeCCCcc
Q 025273          246 VVAGGMP  252 (255)
Q Consensus       246 ~~dgG~~  252 (255)
                      .+|||..
T Consensus       241 ~~~gg~~  247 (250)
T PRK08063        241 IVDGGRS  247 (250)
T ss_pred             EECCCee
Confidence            9999975

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-41  Score=273.74  Aligned_cols=245  Identities=22%  Similarity=0.374  Sum_probs=198.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc----hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ----KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      +.+++|++|||||++|||++++++|+++|++|++++++.    +..+...+++...+.++.++++|+++.++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            447899999999999999999999999999977776432    3444555556555668899999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhh
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .+.++++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.+.|++.+++++++|.....+.+.+..|+++
T Consensus        84 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~s  162 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGS  162 (257)
T ss_pred             HHhhCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhh
Confidence            999999999999999865 4667788899999999999999999999999999877888877444333456678899999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHH--HHHHhhccc--CCCCCHHHHHHHHHHhcCCCCC
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVR--QTIEQNTLL--NRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      |+|++.|+++++.|+.+ +|++++++||++.|++...........  .......+.  .++.+|+|+++.+.|++++ ..
T Consensus       163 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~  241 (257)
T PRK12744        163 KAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD-GW  241 (257)
T ss_pred             HHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc-cc
Confidence            99999999999999988 999999999999998764322211100  011111222  2688999999999999985 57


Q ss_pred             CccccEEEeCCCcccC
Q 025273          239 YITGETLVVAGGMPSR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      +++|+++.+|||+..+
T Consensus       242 ~~~g~~~~~~gg~~~~  257 (257)
T PRK12744        242 WITGQTILINGGYTTK  257 (257)
T ss_pred             eeecceEeecCCccCC
Confidence            8999999999998754

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-40  Score=268.77  Aligned_cols=231  Identities=24%  Similarity=0.435  Sum_probs=194.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++|++|||||+||||++++++|+++|++|++++++ .+..+.+.++.     .+.++.+|+++.+++.+++++    +
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~   73 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S   73 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h
Confidence            4679999999999999999999999999999888764 44444333322     245678999999988877653    5


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-CCCCCChhhHhhHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-QPQSSMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK~a  166 (255)
                      +++|++|||||... .....+.+.++|++.+++|+.+++.+++.+.+.|++.+++|++||..+. .+.++...|+++|++
T Consensus        74 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa  152 (237)
T PRK12742         74 GALDILVVNAGIAV-FGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSA  152 (237)
T ss_pred             CCCcEEEECCCCCC-CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHH
Confidence            78999999999865 3556678899999999999999999999999999878899999998874 577889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.+++.++.++.+ +|+||+|+||+++|++.....   ...+......+.+++.+|+|+++.+.||+++..++++|+.+
T Consensus       153 ~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~  229 (237)
T PRK12742        153 LQGMARGLARDFGPRGITINVVQPGPIDTDANPANG---PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMH  229 (237)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCEE
Confidence            99999999999988 999999999999999864321   12233344457788999999999999999999999999999


Q ss_pred             EeCCCcc
Q 025273          246 VVAGGMP  252 (255)
Q Consensus       246 ~~dgG~~  252 (255)
                      .+|||+.
T Consensus       230 ~~dgg~~  236 (237)
T PRK12742        230 TIDGAFG  236 (237)
T ss_pred             EeCCCcC
Confidence            9999975

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-40  Score=272.41  Aligned_cols=244  Identities=30%  Similarity=0.364  Sum_probs=206.2

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.. ...+++...+.++.++++|+++.++++++++++.+.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            3558899999999999999999999999999999999998766 556666656778999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++++|++|||||... ...+.... ++|++.+++|+.+++.+.+.+.+.++ ..++|+++||..+..+.++...|+++|+
T Consensus        81 ~~~id~vi~~ag~~~-~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~  158 (258)
T PRK08628         81 FGRIDGLVNNAGVND-GVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKG  158 (258)
T ss_pred             cCCCCEEEECCcccC-CCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHH
Confidence            999999999999754 33444444 88999999999999999999999886 4579999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---Ch-hHHHHHHhhccc-CCCCCHHHHHHHHHHhcCCCCCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---ND-GVRQTIEQNTLL-NRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---~~-~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +++.++++++.|+.+ +|+++.|+||.++|++...+..   .. ..........+. .++.+|+|+++.+.+++++....
T Consensus       159 a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  238 (258)
T PRK08628        159 AQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSH  238 (258)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhcc
Confidence            999999999999977 9999999999999997643221   11 111112222343 36889999999999999998889


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+.+.+|||++.
T Consensus       239 ~~g~~~~~~gg~~~  252 (258)
T PRK08628        239 TTGQWLFVDGGYVH  252 (258)
T ss_pred             ccCceEEecCCccc
Confidence            99999999999753

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3e-40  Score=268.81  Aligned_cols=240  Identities=25%  Similarity=0.377  Sum_probs=207.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++|||||++|||++++++|+++|++|++. +++....+...+++...+.++.++.+|+++.++++++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            368999999999999999999999999998875 4555555555566655567888899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++.+.+.+.+.|++  .++||++||..+..+.+....|+++|++
T Consensus        81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a  159 (246)
T PRK12938         81 EIDVLVNNAGITR-DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG  159 (246)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHH
Confidence            9999999999865 356788899999999999999999999999998863  4699999999988888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.++++++.++.+ +|++++|+||+++|++.....  ++.........+..++.+++|+++.+.|++++...+++|+.+
T Consensus       160 ~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~  237 (246)
T PRK12938        160 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR--PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADF  237 (246)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC--hHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence            99999999999987 999999999999999875432  233333334456778899999999999999998889999999


Q ss_pred             EeCCCcc
Q 025273          246 VVAGGMP  252 (255)
Q Consensus       246 ~~dgG~~  252 (255)
                      .+|||+.
T Consensus       238 ~~~~g~~  244 (246)
T PRK12938        238 SLNGGLH  244 (246)
T ss_pred             EECCccc
Confidence            9999964

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.6e-40  Score=268.30  Aligned_cols=243  Identities=40%  Similarity=0.615  Sum_probs=214.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+..+...+.+.. +.++.+++||+++.++++++++++.+.+++
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            6789999999999999999999999999999999998877776666544 567889999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|++||++|......++.+.+.+++++.+++|+.+++.+++.+.+.|+  +.+++|++||..+..+.++...|+.+|+++
T Consensus        82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~  161 (251)
T PRK07231         82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAV  161 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHH
Confidence            999999999865556678889999999999999999999999999985  457899999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC--hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +.+++.++.++.+ +|++++++||+++|++.......  ++.........+.+++..|+|+++.+++++++...+++|+.
T Consensus       162 ~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~  241 (251)
T PRK07231        162 ITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVT  241 (251)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCCe
Confidence            9999999999988 99999999999999987654331  23333445556778889999999999999988888899999


Q ss_pred             EEeCCCccc
Q 025273          245 LVVAGGMPS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +.+|||...
T Consensus       242 ~~~~gg~~~  250 (251)
T PRK07231        242 LVVDGGRCV  250 (251)
T ss_pred             EEECCCccC
Confidence            999999764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-40  Score=277.93  Aligned_cols=240  Identities=24%  Similarity=0.334  Sum_probs=204.6

Q ss_pred             cccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         5 ~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      .|..++++|++|||||++|||++++++|+++|++|++.+++. +..+...+++...+.++.++++|+++.++++++++.+
T Consensus         5 ~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~   84 (306)
T PRK07792          5 TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATA   84 (306)
T ss_pred             cCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            455678999999999999999999999999999999998854 4566677777766778999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---------CCeEEEEcccCccCCC
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---------GSSVVLISSIAGYQPQ  154 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---------~~~iv~iss~~~~~~~  154 (255)
                      .+ +|++|++|||||... ...+.+.+.++|++.+++|+.+++.+++++.++|++         .++||++||..+..+.
T Consensus        85 ~~-~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (306)
T PRK07792         85 VG-LGGLDIVVNNAGITR-DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP  162 (306)
T ss_pred             HH-hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC
Confidence            88 999999999999875 456778899999999999999999999999998852         2699999999998888


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC-hhHHHHHHhhcccCCCCCHHHHHHHHHHh
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVRQTIEQNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  232 (255)
                      +....|+++|++++.|++.++.|+.+ ||++|+|+||. .|++....... ....  .    ......+|+|++..+.||
T Consensus       163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~--~----~~~~~~~pe~va~~v~~L  235 (306)
T PRK07792        163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDVE--A----GGIDPLSPEHVVPLVQFL  235 (306)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchhh--h----hccCCCCHHHHHHHHHHH
Confidence            88999999999999999999999988 99999999994 88876433221 1110  0    111234899999999999


Q ss_pred             cCCCCCCccccEEEeCCCccc
Q 025273          233 ASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++...+++|+++.+|||...
T Consensus       236 ~s~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        236 ASPAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             cCccccCCCCCEEEEcCCeEE
Confidence            999888999999999999754

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-40  Score=271.10  Aligned_cols=245  Identities=32%  Similarity=0.424  Sum_probs=214.0

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+..+...+++...  ..++.++++|++++++++++++++.+.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999988777776666544  357888999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++|||+|......++.+.+.++|++++++|+.+++.+++.+.+.|.  +.++|+++||..+..+.++...|+++|
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  163 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTK  163 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHH
Confidence            999999999999765446677788999999999999999999999999885  457999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.+++.++.++.+ +|+++.|+||+++|++..................+.+++++++|+++++.++++....+++|+
T Consensus       164 ~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~  243 (276)
T PRK05875        164 SAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQ  243 (276)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCC
Confidence            9999999999999987 999999999999999876544433333334445567888999999999999999888889999


Q ss_pred             EEEeCCCccc
Q 025273          244 TLVVAGGMPS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      .+++|||...
T Consensus       244 ~~~~~~g~~~  253 (276)
T PRK05875        244 VINVDGGHML  253 (276)
T ss_pred             EEEECCCeec
Confidence            9999999875

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-40  Score=276.65  Aligned_cols=234  Identities=23%  Similarity=0.317  Sum_probs=203.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.. +.++..++||+++.++++++++++.+.+
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            568899999999999999999999999999999999999888887777643 4577788899999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      +++|++|||||... ..++.+.+.++|++++++|+.+++++++.++|.|. +.++||++||..+..+.+.+..|+++|++
T Consensus        84 g~id~vI~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  162 (296)
T PRK05872         84 GGIDVVVANAGIAS-GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAG  162 (296)
T ss_pred             CCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHHH
Confidence            99999999999876 57788899999999999999999999999999885 56899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhh--cccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN--TLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++.|+++++.|+.+ +|++++++||+++|++.............+...  .+.++..+|+|+++.+.++++....++++.
T Consensus       163 l~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~i~~~  242 (296)
T PRK05872        163 VEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARRVYAP  242 (296)
T ss_pred             HHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCEEEch
Confidence            99999999999987 999999999999999876543332222222222  356778899999999999998887777665

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=7.2e-40  Score=267.08  Aligned_cols=242  Identities=28%  Similarity=0.453  Sum_probs=214.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+++...+.++.++++|+++.++++++++.+.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999998887777777666678999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|++|||+|... ..++.+.+.+++++.+++|+.+++.+.+.+.+.|+  +.++++++||..++.+.+....|+.+|+++
T Consensus        81 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~  159 (250)
T TIGR03206        81 VDVLVNNAGWDK-FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGL  159 (250)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHH
Confidence            999999999864 46677788999999999999999999999999886  357899999999988888999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC----ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      +.++++++.++.+ +++++.++||+++|++......    .......+....+.+++.+|+|+++.+.++++++..+++|
T Consensus       160 ~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g  239 (250)
T TIGR03206       160 VAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITG  239 (250)
T ss_pred             HHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcC
Confidence            9999999999877 9999999999999998765431    2223345556667888899999999999999999889999


Q ss_pred             cEEEeCCCcc
Q 025273          243 ETLVVAGGMP  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      +++.+|||+.
T Consensus       240 ~~~~~~~g~~  249 (250)
T TIGR03206       240 QVLSVSGGLT  249 (250)
T ss_pred             cEEEeCCCcc
Confidence            9999999975

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=7.9e-40  Score=267.51  Aligned_cols=240  Identities=37%  Similarity=0.548  Sum_probs=212.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||+|+||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++++++.++++.+.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999988888877777776778999999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      +|||+|... ..++.+.+.++|++++++|+.+++.+++.+++.|++   +++++++||..+..+.+.+..|+.+|++++.
T Consensus        81 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  159 (254)
T TIGR02415        81 MVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG  159 (254)
T ss_pred             EEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence            999999865 467788899999999999999999999999998752   4699999999998888999999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC---------hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      |++.++.++.+ +|+++.++||+++|++.......         ...........+.+++.+|+|+++.+.|++++...+
T Consensus       160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  239 (254)
T TIGR02415       160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDY  239 (254)
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCC
Confidence            99999999988 99999999999999986544221         112233445567788999999999999999999889


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+++.+|||+..
T Consensus       240 ~~g~~~~~d~g~~~  253 (254)
T TIGR02415       240 ITGQSILVDGGMVY  253 (254)
T ss_pred             ccCcEEEecCCccC
Confidence            99999999999753

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-40  Score=268.92  Aligned_cols=246  Identities=29%  Similarity=0.428  Sum_probs=212.6

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +.++++|++|||||+|+||++++++|+++|++|++++|+++..+...+++...+.++.++++|+++.++++++++++.+.
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888888888776778999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcc-c--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-Q--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      ++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++.+++.+ +  +.++||++||..+..+.+....|+++
T Consensus        82 ~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~s  160 (262)
T PRK13394         82 FGSVDILVSNAGIQI-VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTA  160 (262)
T ss_pred             cCCCCEEEECCccCC-CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHH
Confidence            999999999999865 4566778889999999999999999999999998 4  35799999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC---------hh-HHHHHHhhcccCCCCCHHHHHHHHHHh
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------DG-VRQTIEQNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~d~a~~~~~l  232 (255)
                      |++++.+++.++.++.+ +|+++.++||+++|++.......         +. ....+....+.+++.+++|+++++.++
T Consensus       161 k~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l  240 (262)
T PRK13394        161 KHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFL  240 (262)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence            99999999999999877 99999999999999875433211         11 111222344567899999999999999


Q ss_pred             cCCCCCCccccEEEeCCCccc
Q 025273          233 ASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++.....++|+.+.+|+|+..
T Consensus       241 ~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        241 SSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             cCccccCCcCCEEeeCCceec
Confidence            988777899999999999754

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=3.4e-40  Score=252.48  Aligned_cols=245  Identities=27%  Similarity=0.338  Sum_probs=223.3

Q ss_pred             ccCCCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa--~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ..|+||++||+|-  .+.|++.+|+.|+++|+++.+++.++ ++++-.+++.+.-+...+++||+++.++++++|+++.+
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            4689999999995  48999999999999999999999987 45554555555444567799999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHh
Q 025273           86 KFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      ++|++|++||+.|+..+   .+.+.+.+.|.|...+++..++...+.+++.|.|++++.|+.++...+.+..|.+...++
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGv  160 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGV  160 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHH
Confidence            99999999999998753   467778999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +|+++|+-+|.||.++++ |||||+|+.|++.|-....+........+.....|+++.+++|||+...+||+|+-++.++
T Consensus       161 AKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssgiT  240 (259)
T COG0623         161 AKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSGIT  240 (259)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhcccc
Confidence            999999999999999999 9999999999999977777766777888888999999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      ||++.+|+|++.
T Consensus       241 Gei~yVD~G~~i  252 (259)
T COG0623         241 GEIIYVDSGYHI  252 (259)
T ss_pred             cceEEEcCCcee
Confidence            999999999975

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-40  Score=271.54  Aligned_cols=233  Identities=26%  Similarity=0.380  Sum_probs=201.0

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-------HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-------VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.       ++...+++...+.++.++++|+++.++++++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999998653       344555666566789999999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCC--CCC
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQ--SSM  157 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~--~~~  157 (255)
                      ++.+.++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++++.|+  ..++|+++||..+..+.  +++
T Consensus        83 ~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  161 (273)
T PRK08278         83 KAVERFGGIDICVNNASAIN-LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPH  161 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcC-CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCc
Confidence            99999999999999999865 45677888999999999999999999999999986  35799999998877776  788


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCC-cccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG-FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      ..|++||++++.|+++++.|+.+ +|++|+|+|| +++|++.+.....         ..+.+++.+|+++++.+++++++
T Consensus       162 ~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~---------~~~~~~~~~p~~va~~~~~l~~~  232 (273)
T PRK08278        162 TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG---------DEAMRRSRTPEIMADAAYEILSR  232 (273)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc---------cccccccCCHHHHHHHHHHHhcC
Confidence            99999999999999999999988 9999999999 6889865543221         12345678999999999999999


Q ss_pred             CCCCccccEEEeCCCcc
Q 025273          236 DASYITGETLVVAGGMP  252 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~  252 (255)
                      ...+++|+.+ +|++..
T Consensus       233 ~~~~~~G~~~-~~~~~~  248 (273)
T PRK08278        233 PAREFTGNFL-IDEEVL  248 (273)
T ss_pred             ccccceeEEE-eccchh
Confidence            8889999976 777754

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-40  Score=268.97  Aligned_cols=241  Identities=23%  Similarity=0.270  Sum_probs=208.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +|++|||||+++||++++++|+++|++|++++|+...++...+++....  .++.++.||+++.++++++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999888777776665432  47899999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      +|++|||||... ..++.+.+.++|++.+++|+.+++.+.+++.+.|++   .++||++||..+..+.+....|+++|+|
T Consensus        82 id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa  160 (259)
T PRK12384         82 VDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG  160 (259)
T ss_pred             CCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence            999999999765 467788899999999999999999999999998852   4699999998887787888999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcc-cCCccccccC---------ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFV-PTHFAEYITS---------NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v-~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      ++.++++++.|+.+ ||++++|+||++ .|++.....+         .++.........+.+++.+|+|+++.+.++++.
T Consensus       161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~  240 (259)
T PRK12384        161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP  240 (259)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCc
Confidence            99999999999977 999999999975 6665432211         223333344567889999999999999999998


Q ss_pred             CCCCccccEEEeCCCccc
Q 025273          236 DASYITGETLVVAGGMPS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      ...+++|+++++|||...
T Consensus       241 ~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        241 KASYCTGQSINVTGGQVM  258 (259)
T ss_pred             ccccccCceEEEcCCEEe
Confidence            888899999999999753

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=7.5e-40  Score=267.36  Aligned_cols=235  Identities=27%  Similarity=0.403  Sum_probs=205.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++++|++|||||+++||++++++|+++|++|++++|+.         +...+.++.++++|+++.++++++++++.+.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999986         12235578899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++++.+.|+  +.++|+++||..+..+.++...|+++|+
T Consensus        75 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~  153 (252)
T PRK08220         75 GPLDVLVNAAGILR-MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKA  153 (252)
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHH
Confidence            99999999999865 46777888999999999999999999999999885  4579999999998888888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChh--------HHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG--------VRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      +++.++++++.|+.+ +|+++.+.||+++|++.........        .........+.+++.+|+|+++.+.+|+++.
T Consensus       154 a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        154 ALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             HHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcch
Confidence            999999999999987 9999999999999998654422111        1123344567788999999999999999998


Q ss_pred             CCCccccEEEeCCCcc
Q 025273          237 ASYITGETLVVAGGMP  252 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~  252 (255)
                      ..+++|+++.+|||..
T Consensus       234 ~~~~~g~~i~~~gg~~  249 (252)
T PRK08220        234 ASHITLQDIVVDGGAT  249 (252)
T ss_pred             hcCccCcEEEECCCee
Confidence            8899999999999965

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=266.09  Aligned_cols=243  Identities=30%  Similarity=0.494  Sum_probs=210.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++++++||||+|+||++++++|+++|++|+++ .|+.+.++...+.+...+.++.++++|+++.+++.++++++.+.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999998775 688777766666665556678899999999999999999998887


Q ss_pred             ------CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhH
Q 025273           88 ------GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        88 ------g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                            +++|++|||||... .....+.+.+.|++.+++|+.+++++++.+.+.|++.+++|++||..+..+.++...|+
T Consensus        83 ~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~  161 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGT-QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYG  161 (254)
T ss_pred             ccccCCCCccEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchH
Confidence                  47999999999865 45677788999999999999999999999999988778999999999988889999999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      .+|++++.++++++.++.+ +++++.++||+++|++.......+..........+.+++.+++|+++.+.+++++...++
T Consensus       162 ~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  241 (254)
T PRK12746        162 LSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWV  241 (254)
T ss_pred             hhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCc
Confidence            9999999999999999987 999999999999999876554444433333445566788899999999999998877788


Q ss_pred             cccEEEeCCCcc
Q 025273          241 TGETLVVAGGMP  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      +|+.++++||+.
T Consensus       242 ~g~~~~i~~~~~  253 (254)
T PRK12746        242 TGQIIDVSGGFC  253 (254)
T ss_pred             CCCEEEeCCCcc
Confidence            999999999964

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.6e-39  Score=266.18  Aligned_cols=237  Identities=25%  Similarity=0.388  Sum_probs=203.1

Q ss_pred             CCCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEeCC-----------chhHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 025273           10 FQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRK-----------QKNVDEAVVKLKARGIEVIGVVCHVSNGQQR   76 (255)
Q Consensus        10 l~~k~vlItGa~~--giG~~~a~~l~~~G~~V~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   76 (255)
                      +++|++|||||++  |||.+++++|+++|++|++++|+           ......+.+++...+.++.++++|+++.+++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            5689999999994  99999999999999999999987           2222224444544566899999999999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCC
Q 025273           77 KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQ  154 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~  154 (255)
                      +.+++++.+.++++|++|||||+.. ..++.+.+.+++++.+++|+.+++.+.+++.+.|+  ..++||++||..+..+.
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~  161 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYST-HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM  161 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence            9999999999999999999999865 46777889999999999999999999999999885  34699999999988888


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      +....|+++|++++.++++++.++.+ +|++++++||+++|++...     ..........+..++.+|+|+++.+.|++
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  236 (256)
T PRK12748        162 PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-----ELKHHLVPKFPQGRVGEPVDAARLIAFLV  236 (256)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-----hHHHhhhccCCCCCCcCHHHHHHHHHHHh
Confidence            88999999999999999999999987 9999999999999986531     22222333445567889999999999999


Q ss_pred             CCCCCCccccEEEeCCCcc
Q 025273          234 SDDASYITGETLVVAGGMP  252 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++...+++|+++++|||+.
T Consensus       237 ~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        237 SEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             CcccccccCCEEEecCCcc
Confidence            9988899999999999974

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=7.4e-40  Score=268.18  Aligned_cols=233  Identities=22%  Similarity=0.316  Sum_probs=197.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHH----cCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           14 VAIVTASTQGIGFGIAERLGL----EGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~----~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++|||||++|||++++++|++    +|++|++++|+.+.++.+.+++...  +.++.++++|+++.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999999888888887652  4578899999999999999999998877


Q ss_pred             CCC----CEEEEcCCCCCCCC-CccC-CCHHHHHHHHHHHhHHHHHHHHHHhhcccC----CCeEEEEcccCccCCCCCC
Q 025273           88 GKI----DVVVSNAAANPSVD-SILQ-TKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQPQSSM  157 (255)
Q Consensus        88 g~~----d~lv~~ag~~~~~~-~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~iv~iss~~~~~~~~~~  157 (255)
                      +.+    |++|||||...... ...+ .+.++|++.+++|+.+++.+++.++|.|++    .++||++||..+..+.+.+
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence            643    69999999754322 2333 357889999999999999999999999863    3689999999999999999


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---ChhHHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      ..|++||+|++.|+++++.|+.+ +|++|+|+||+++|++......   .+.....+....+.+++.+|+|+|+.+++++
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~  241 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLL  241 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999987 9999999999999998754321   2233444555667889999999999999999


Q ss_pred             CCCCCCccccEEEe
Q 025273          234 SDDASYITGETLVV  247 (255)
Q Consensus       234 s~~~~~~~G~~i~~  247 (255)
                      + ..++++|+.+..
T Consensus       242 ~-~~~~~~G~~~~~  254 (256)
T TIGR01500       242 E-KDKFKSGAHVDY  254 (256)
T ss_pred             h-cCCcCCcceeec
Confidence            6 467899998865

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-39  Score=264.14  Aligned_cols=243  Identities=33%  Similarity=0.482  Sum_probs=211.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+..+...+++. .+.++.+++||+++.++++++++++.+.++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999999887776666654 456789999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||+|... ...+.+.+.+++++++++|+.+++.+.+.+++.|+  +.++|+++||..+..+.+....|+.+|++
T Consensus        81 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  159 (252)
T PRK06138         81 RLDVLVNNAGFGC-GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGA  159 (252)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHH
Confidence            9999999999865 46677788999999999999999999999999886  45799999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC----ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ++.++++++.|+.+ ++++++++||+++|++......    ............+..++.+++|++..+.+++++...+++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~  239 (252)
T PRK06138        160 IASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFAT  239 (252)
T ss_pred             HHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence            99999999999977 9999999999999998655432    122222233344566688999999999999999888999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+.+.+|||++.
T Consensus       240 g~~~~~~~g~~~  251 (252)
T PRK06138        240 GTTLVVDGGWLA  251 (252)
T ss_pred             CCEEEECCCeec
Confidence            999999999763

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-39  Score=264.61  Aligned_cols=241  Identities=35%  Similarity=0.556  Sum_probs=209.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+.++...+++...+.++.+++||++++++++++++++.+.++
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999999998888877777766667888999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhc-cc--CCCeEEEEcccCccCCCC----CChhhH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH-LQ--KGSSVVLISSIAGYQPQS----SMAMYG  161 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~--~~~~iv~iss~~~~~~~~----~~~~y~  161 (255)
                      ++|++|||||... ..+..+.+.+.|++.+++|+.+++.+++++.++ |.  +.+++|++||..+..+.+    +...|+
T Consensus        89 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~  167 (259)
T PRK08213         89 HVDILVNNAGATW-GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYN  167 (259)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHH
Confidence            9999999999754 456677888999999999999999999999987 54  346999999987765544    348999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      ++|++++.++++++.++.+ +++++.++||+++|++......  .....+....+..++++|+|+++...+++++...++
T Consensus       168 ~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  245 (259)
T PRK08213        168 TSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLE--RLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKHI  245 (259)
T ss_pred             HHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            9999999999999999987 9999999999999987654322  223334555677788999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 025273          241 TGETLVVAGGMP  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      +|+.+.+|||..
T Consensus       246 ~G~~~~~~~~~~  257 (259)
T PRK08213        246 TGQILAVDGGVS  257 (259)
T ss_pred             cCCEEEECCCee
Confidence            999999999974

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.2e-40  Score=261.19  Aligned_cols=217  Identities=22%  Similarity=0.336  Sum_probs=193.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+.+|++||||||++|+|+++|.+|+++|+++++.|.|.+..++..+++.+.+ +++.++||+++.+++.++.++++++.
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEV  112 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999999999999988764 99999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |.+|+||||||+.. .+++.+.+.+++++++++|+.|++...++++|.|.  +.|+||.++|.+|+.+.++..+|++||+
T Consensus       113 G~V~ILVNNAGI~~-~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~  191 (300)
T KOG1201|consen  113 GDVDILVNNAGIVT-GKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKF  191 (300)
T ss_pred             CCceEEEecccccc-CCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHH
Confidence            99999999999987 67888899999999999999999999999999985  6799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhC---C-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          166 ALLGLTKALAAEMA---P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~---~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      |+.+|.++|..|+.   . +|+...++|++++|.|...-.+.+          .+-...+|+++|+.++..+.-+
T Consensus       192 a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~----------~l~P~L~p~~va~~Iv~ai~~n  256 (300)
T KOG1201|consen  192 AAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFP----------TLAPLLEPEYVAKRIVEAILTN  256 (300)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCc----------cccCCCCHHHHHHHHHHHHHcC
Confidence            99999999999973   3 799999999999999987511111          1223568888888777655433

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-39  Score=263.16  Aligned_cols=244  Identities=34%  Similarity=0.489  Sum_probs=209.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            44678999999999999999999999999999999999887777777776656678889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCC--CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           88 GKIDVVVSNAAANPS--VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      +++|++|||||+...  ..++.+.+.+++++.+++|+.+++++++++++.+.  +.++||++||..++.   +...|+++
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~s  158 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLA  158 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHH
Confidence            999999999998642  34567788899999999999999999999999885  467999999987754   45789999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |++++.+++++++++.. +|+++.++||+++|++...... ...........+..++.+|+|+++.+.+++++...+.+|
T Consensus       159 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g  237 (250)
T PRK07774        159 KVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTP-KEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITG  237 (250)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCC
Confidence            99999999999999977 9999999999999998765433 233334444556667889999999999999877667899


Q ss_pred             cEEEeCCCcccCC
Q 025273          243 ETLVVAGGMPSRL  255 (255)
Q Consensus       243 ~~i~~dgG~~~~~  255 (255)
                      +.+++|+|...++
T Consensus       238 ~~~~v~~g~~~~~  250 (250)
T PRK07774        238 QIFNVDGGQIIRS  250 (250)
T ss_pred             CEEEECCCeeccC
Confidence            9999999988764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=2.2e-39  Score=262.65  Aligned_cols=233  Identities=27%  Similarity=0.441  Sum_probs=203.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      +|||||++|||++++++|+++|++|++++|. .+.++...+++...+.++.++++|+++.++++++++++.+.++++|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999998865 455666677776667789999999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHh-hccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHHH
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAA-PHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l  170 (255)
                      |||+|... ..++.+.+.++|++++++|+.+++++.+.++ |.++  +.++||++||..+..+.+....|+++|++++.+
T Consensus        81 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~  159 (239)
T TIGR01831        81 VLNAGITR-DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA  159 (239)
T ss_pred             EECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence            99999865 3567778899999999999999999999875 4443  457999999999998989999999999999999


Q ss_pred             HHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCC
Q 025273          171 TKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       171 ~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                      +++++.|+.+ +|+++.|+||+++|++.....   +.........+++++.+|+|+++.+.||+++...+++|+.+.+||
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g  236 (239)
T TIGR01831       160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVE---HDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNG  236 (239)
T ss_pred             HHHHHHHHhHhCeEEEEEEEccCccccchhhh---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecC
Confidence            9999999987 999999999999999876432   112233445678889999999999999999999999999999999


Q ss_pred             Cc
Q 025273          250 GM  251 (255)
Q Consensus       250 G~  251 (255)
                      |+
T Consensus       237 g~  238 (239)
T TIGR01831       237 GM  238 (239)
T ss_pred             Cc
Confidence            96

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-39  Score=262.29  Aligned_cols=238  Identities=30%  Similarity=0.412  Sum_probs=202.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |++|||||++|||++++++|+++|++|+++. |+.+.++...+++...+.++.+++||+++.++++++++++.+.++++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            7899999999999999999999999988764 666666667777766667899999999999999999999999899999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-----CCeEEEEcccCccCCCCC-ChhhHhhHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSS-MAMYGVTKT  165 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~iss~~~~~~~~~-~~~y~~sK~  165 (255)
                      ++|||||......++.+.+.+++++.+++|+.+++.+++.+++.+..     .++||++||..+..+.+. +..|+++|+
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK~  162 (248)
T PRK06947         83 ALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKG  162 (248)
T ss_pred             EEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhHH
Confidence            99999998754556778899999999999999999999999987742     468999999888766553 568999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.++++++.++.+ +|+++.|+||+++|++.... ..+..........+.++..+|+|+++.++++++....+++|++
T Consensus       163 ~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~  241 (248)
T PRK06947        163 AVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-GQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGAL  241 (248)
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-CCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCce
Confidence            999999999999987 99999999999999976432 1222223334455667788999999999999999888999999


Q ss_pred             EEeCCCc
Q 025273          245 LVVAGGM  251 (255)
Q Consensus       245 i~~dgG~  251 (255)
                      +.+|||.
T Consensus       242 ~~~~gg~  248 (248)
T PRK06947        242 LDVGGGR  248 (248)
T ss_pred             EeeCCCC
Confidence            9999983

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=4.8e-39  Score=261.42  Aligned_cols=239  Identities=28%  Similarity=0.473  Sum_probs=206.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+|+||++++++|+++|+.|++.+|+.+.++...+.+   +.++.++.+|+++.++++++++++.+.++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            567999999999999999999999999999999999887766654433   45788899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++.+++.+.+.++  +.+++|++||..+..+.+....|+.+|++
T Consensus        80 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a  158 (245)
T PRK12936         80 GVDILVNNAGITK-DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAG  158 (245)
T ss_pred             CCCEEEECCCCCC-CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHH
Confidence            9999999999865 35677788899999999999999999999998763  56799999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      +..+++.++.++.+ ++++++|+||+++|++.....  +..........+.+++.+|+|+++.+.+++++...+++|+++
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~  236 (245)
T PRK12936        159 MIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN--DKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTI  236 (245)
T ss_pred             HHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC--hHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEE
Confidence            99999999999887 999999999999998765432  222222334457778889999999999999888788999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||+..
T Consensus       237 ~~~~g~~~  244 (245)
T PRK12936        237 HVNGGMAM  244 (245)
T ss_pred             EECCCccc
Confidence            99999753

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=4.8e-41  Score=256.84  Aligned_cols=227  Identities=26%  Similarity=0.380  Sum_probs=193.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +++||.+++||+.||||++++++|+++|.++.+++.+.+..+..+ +++..  ..++.|++||+++..+++++++++...
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999888777766655443 34333  568999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-----CCCeEEEEcccCccCCCCCChhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-----KGSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-----~~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      ||.+|++||+||+..         +.+|++++++|+.|.++-++..+|+|.     ++|-|||+||..|..|.+..+.|+
T Consensus        81 fg~iDIlINgAGi~~---------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~  151 (261)
T KOG4169|consen   81 FGTIDILINGAGILD---------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYA  151 (261)
T ss_pred             hCceEEEEccccccc---------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhh
Confidence            999999999999865         445999999999999999999999995     578999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHh--CC-CeeEEEEeCCcccCCccccccC------ChhHHHHHHhhcccCCCCCHHHHHHHHHHh
Q 025273          162 VTKTALLGLTKALAAEM--AP-DTRVNCVAPGFVPTHFAEYITS------NDGVRQTIEQNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~--~~-~v~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  232 (255)
                      +||+++..|+|+++...  .+ ||+++++|||++.|.+...+..      .++.........+   ...|.+++..++..
T Consensus       152 AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~---~q~~~~~a~~~v~a  228 (261)
T KOG4169|consen  152 ASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP---KQSPACCAINIVNA  228 (261)
T ss_pred             hcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc---cCCHHHHHHHHHHH
Confidence            99999999999999874  44 9999999999999998877732      2333333333333   45899999999988


Q ss_pred             cCCCCCCccccEEEeCCCc
Q 025273          233 ASDDASYITGETLVVAGGM  251 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~  251 (255)
                      ++.   ..||+.+.+|+|.
T Consensus       229 iE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  229 IEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             Hhh---ccCCcEEEEecCc
Confidence            866   3699999999885

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-39  Score=260.76  Aligned_cols=239  Identities=27%  Similarity=0.382  Sum_probs=203.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +|++|||||+++||++++++|+++|+.|+++++ +++..+...+++...+.++.+++||+++.++++++++++.+.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999888874 4445555555565556678899999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-----CCeEEEEcccCccCCCCC-ChhhHhhH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSS-MAMYGVTK  164 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~iss~~~~~~~~~-~~~y~~sK  164 (255)
                      |++|||||......++.+.+.++|++++++|+.+++.+++.+++.|++     .++|+++||..+..+.+. +..|+++|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            999999998754456778899999999999999999999999998852     468999999988777665 36799999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.|+++++.++.+ +|+++.|+||++.|++..... .+..........+.++..+|+|+++.+.++++....+++|+
T Consensus       162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~  240 (248)
T PRK06123        162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGT  240 (248)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCC
Confidence            9999999999999987 999999999999999754322 22233344455678888899999999999999888889999


Q ss_pred             EEEeCCCc
Q 025273          244 TLVVAGGM  251 (255)
Q Consensus       244 ~i~~dgG~  251 (255)
                      .+++|||.
T Consensus       241 ~~~~~gg~  248 (248)
T PRK06123        241 FIDVSGGR  248 (248)
T ss_pred             EEeecCCC
Confidence            99999973

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-39  Score=272.63  Aligned_cols=226  Identities=26%  Similarity=0.322  Sum_probs=196.5

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|+++.++++++++++.+
T Consensus         1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          1 MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999999988888877778899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|++|||||... ..++.+.+.+++++.+++|+.+++++++.++|+|+  +.++||++||..++.+.+.+..|++|
T Consensus        81 ~~g~iD~lVnnAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~as  159 (330)
T PRK06139         81 FGGRIDVWVNNVGVGA-VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSAS  159 (330)
T ss_pred             hcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHH
Confidence            8899999999999865 56788899999999999999999999999999986  35799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC--CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          164 KTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~--~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      |+++.+|+++++.|+.+  +|+|++|+||+++|++.........     ....+.....+|+++|+.+++++....
T Consensus       160 Kaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~-----~~~~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        160 KFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG-----RRLTPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc-----ccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999999864  7999999999999998643221110     011122346799999999999886543

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.3e-39  Score=261.86  Aligned_cols=229  Identities=24%  Similarity=0.360  Sum_probs=195.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|+++||||+++||++++++|+++|++|++++|+....         ...++.++++|++++      ++++.+.++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~~   66 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWVP   66 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhhC
Confidence            36789999999999999999999999999999999985431         134688899999887      444555668


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||......++.+.+.++|++.+++|+.+++++++.+++.++  +.++||++||..+..+.+....|+.+|++
T Consensus        67 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  146 (235)
T PRK06550         67 SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHA  146 (235)
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHH
Confidence            9999999999764345677888999999999999999999999999885  45799999999998888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.++++++.|+.+ +|+++.|+||+++|++..................+.+++.+|+|+++.+.|++++...+++|+++
T Consensus       147 ~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~  226 (235)
T PRK06550        147 LAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIV  226 (235)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEE
Confidence            99999999999987 99999999999999986533333333344555678888999999999999999998889999999


Q ss_pred             EeCCCcc
Q 025273          246 VVAGGMP  252 (255)
Q Consensus       246 ~~dgG~~  252 (255)
                      .+|||+.
T Consensus       227 ~~~gg~~  233 (235)
T PRK06550        227 PIDGGWT  233 (235)
T ss_pred             EECCcee
Confidence            9999974

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-39  Score=260.40  Aligned_cols=213  Identities=23%  Similarity=0.274  Sum_probs=179.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      +++||||++|||++++++|+++|++|++++|+.++++...+++     .+.++++|++++++++++++++.+   ++|++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~l   73 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTI   73 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEE
Confidence            5999999999999999999999999999999987776655543     356788999999999999887643   69999


Q ss_pred             EEcCCCCCC-----CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           94 VSNAAANPS-----VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        94 v~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      |||+|....     ...+.+ +.++|++++++|+.+++.++++++|.|+++++||++||..    .+....|+++|+|+.
T Consensus        74 v~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~~~~Y~asKaal~  148 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPAGSAEAAIKAALS  148 (223)
T ss_pred             EECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCCccccHHHHHHHH
Confidence            999985311     112333 4788999999999999999999999998889999999976    345688999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +|+++++.|+.+ +||+|+|+||+++|++.....           ..+.   .+|+|+++.+.||+++.+.+++|+++.+
T Consensus       149 ~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~-----------~~p~---~~~~~ia~~~~~l~s~~~~~v~G~~i~v  214 (223)
T PRK05884        149 NWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS-----------RTPP---PVAAEIARLALFLTTPAARHITGQTLHV  214 (223)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc-----------CCCC---CCHHHHHHHHHHHcCchhhccCCcEEEe
Confidence            999999999988 999999999999998642110           1122   3899999999999999999999999999


Q ss_pred             CCCccc
Q 025273          248 AGGMPS  253 (255)
Q Consensus       248 dgG~~~  253 (255)
                      |||...
T Consensus       215 dgg~~~  220 (223)
T PRK05884        215 SHGALA  220 (223)
T ss_pred             CCCeec
Confidence            999865

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-39  Score=261.42  Aligned_cols=218  Identities=15%  Similarity=0.211  Sum_probs=188.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++..++||+++.++++++++++.+++|
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            36799999999999999999999999999999999999998888888877677888899999999999999999999998


Q ss_pred             -CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhH
Q 025273           89 -KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                       ++|++|||||......++.+.+.++|.+.+++|+.+++.+++.++|+|++   .++||++||..+.   +++..|+++|
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~asK  158 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESSN  158 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHHH
Confidence             99999999987654567888899999999999999999999999999862   5799999997643   4578899999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +|+.+|+++++.|+.+ +||||+|+||+++|+...    .++.....           .+|++....||++  +.+++|+
T Consensus       159 aal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~----~~~~~~~~-----------~~~~~~~~~~l~~--~~~~tg~  221 (227)
T PRK08862        159 ALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL----DAVHWAEI-----------QDELIRNTEYIVA--NEYFSGR  221 (227)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc----CHHHHHHH-----------HHHHHhheeEEEe--cccccce
Confidence            9999999999999988 999999999999998321    11111100           1799999999996  6689999


Q ss_pred             EEE
Q 025273          244 TLV  246 (255)
Q Consensus       244 ~i~  246 (255)
                      .+.
T Consensus       222 ~~~  224 (227)
T PRK08862        222 VVE  224 (227)
T ss_pred             EEe
Confidence            875

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=9e-39  Score=259.78  Aligned_cols=238  Identities=29%  Similarity=0.398  Sum_probs=206.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |++|||||+++||++++++|+++|++|++++|+.. ..+...+.....+.++.++++|+++.++++++++++.+.++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999854 22223333333356789999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++|||+|... ..++.+.+.++|++++++|+.+++++++.+++.++  +.++||++||..+..+.+....|+++|++++.
T Consensus        83 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T PRK12824         83 ILVNNAGITR-DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG  161 (245)
T ss_pred             EEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            9999999865 46677889999999999999999999999999885  46799999999999888899999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeC
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA  248 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      +++.++.++.+ +++++.++||+++|++.....  +.....+....+.+.+.+++|+++.+.+++++...+++|+.+.+|
T Consensus       162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~  239 (245)
T PRK12824        162 FTKALASEGARYGITVNCIAPGYIATPMVEQMG--PEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISIN  239 (245)
T ss_pred             HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEEC
Confidence            99999999877 999999999999999875442  334444555667788889999999999999888888999999999


Q ss_pred             CCccc
Q 025273          249 GGMPS  253 (255)
Q Consensus       249 gG~~~  253 (255)
                      ||++.
T Consensus       240 ~g~~~  244 (245)
T PRK12824        240 GGLYM  244 (245)
T ss_pred             CCeec
Confidence            99864

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.2e-39  Score=288.57  Aligned_cols=240  Identities=33%  Similarity=0.492  Sum_probs=208.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++...+++   +.++.++++|++++++++++++++.+.+++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGR   79 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999988777665554   457788999999999999999999999999


Q ss_pred             CCEEEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--C-CCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           90 IDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--K-GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        90 ~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~-~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +|+||||||+... ..++.+.+.++|++++++|+.+++.++++++|+|+  + +++||++||..+..+.+....|+++|+
T Consensus        80 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKa  159 (520)
T PRK06484         80 IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKA  159 (520)
T ss_pred             CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHH
Confidence            9999999998432 35677889999999999999999999999999984  2 349999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhH-HHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV-RQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      |++.|+++++.|+.+ +|++++|+||+++|++.......... ........+.+++.+|+|+++.+.|++++...+++|+
T Consensus       160 al~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~  239 (520)
T PRK06484        160 AVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGS  239 (520)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCc
Confidence            999999999999988 99999999999999987654322111 1223344566778899999999999999988999999


Q ss_pred             EEEeCCCcc
Q 025273          244 TLVVAGGMP  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      .+.+|||+.
T Consensus       240 ~~~~~gg~~  248 (520)
T PRK06484        240 TLVVDGGWT  248 (520)
T ss_pred             eEEecCCee
Confidence            999999975

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-39  Score=261.95  Aligned_cols=243  Identities=28%  Similarity=0.419  Sum_probs=210.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++|+++||||+++||++++++|+++|++ |++++|+.+..+...+++...+.++.++.+|++++++++++++.+.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999 9999999877777777776567788899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +++|++|||+|... ...+.+.+.++|++++++|+.+++.+++.+++.|++   .+++|++||..++.+.+....|+.+|
T Consensus        83 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  161 (260)
T PRK06198         83 GRLDALVNAAGLTD-RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASK  161 (260)
T ss_pred             CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHH
Confidence            99999999999865 456778899999999999999999999999998853   47899999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc-----CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT-----SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      ++++.++++++.|+.+ +|++++++||+++|++.....     ....+........+.+++.+++|+++.+.+++++..+
T Consensus       162 ~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~  241 (260)
T PRK06198        162 GALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESG  241 (260)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhC
Confidence            9999999999999987 999999999999998753211     1122233333455677888999999999999998888


Q ss_pred             CccccEEEeCCCcc
Q 025273          239 YITGETLVVAGGMP  252 (255)
Q Consensus       239 ~~~G~~i~~dgG~~  252 (255)
                      +++|+.|.+|+|..
T Consensus       242 ~~~G~~~~~~~~~~  255 (260)
T PRK06198        242 LMTGSVIDFDQSVW  255 (260)
T ss_pred             CccCceEeECCccc
Confidence            99999999999864

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-39  Score=260.34  Aligned_cols=241  Identities=29%  Similarity=0.377  Sum_probs=205.7

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |+++.++++|+++|||++++||+++++.|+++|++|++++|+.+.++.+.++.     ...++++|+++.++++++++. 
T Consensus         1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~-   74 (245)
T PRK07060          1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA-   74 (245)
T ss_pred             CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH-
Confidence            66777789999999999999999999999999999999999987665544432     345788999999988887764 


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhh
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y  160 (255)
                         ++++|++|||+|... .....+.+.+++++.+++|+.+++.+.+++.+.+++   .++||++||..++.+.+....|
T Consensus        75 ---~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y  150 (245)
T PRK07060         75 ---AGAFDGLVNCAGIAS-LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAY  150 (245)
T ss_pred             ---hCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHh
Confidence               568999999999865 456667888999999999999999999999998753   3799999999998888899999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +.+|++++.+++.++.++.+ ++++++++||+++|++..................+.+++.+++|+++.+.+++++....
T Consensus       151 ~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~  230 (245)
T PRK07060        151 CASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASM  230 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999987 99999999999999986543333333344445567788999999999999999988889


Q ss_pred             ccccEEEeCCCcccC
Q 025273          240 ITGETLVVAGGMPSR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      ++|+.+.+|||+..|
T Consensus       231 ~~G~~~~~~~g~~~~  245 (245)
T PRK07060        231 VSGVSLPVDGGYTAR  245 (245)
T ss_pred             ccCcEEeECCCccCC
Confidence            999999999998654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.6e-38  Score=258.87  Aligned_cols=239  Identities=31%  Similarity=0.512  Sum_probs=205.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++|||||+|+||++++++|+++|++|+++.+ +.+..+...+++...+.++.++++|++++++++++++++.+.++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999887654 45555666666666667899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||... ...+.+.+.+++++.+++|+.+++.+++.+++.|.  +.+++|++||..+..+.+++..|+++|++
T Consensus        84 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  162 (247)
T PRK12935         84 KVDILVNNAGITR-DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAG  162 (247)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHH
Confidence            9999999999865 45667788899999999999999999999999885  45799999999988888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.++++++.++.+ +++++.++||+++|++.....  ...........+.+++..|+|+++.+.+++++. .+++|+.+
T Consensus       163 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~~-~~~~g~~~  239 (247)
T PRK12935        163 MLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP--EEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDG-AYITGQQL  239 (247)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc--HHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCcc-cCccCCEE
Confidence            99999999999977 999999999999998765432  222333334556677899999999999999754 57899999


Q ss_pred             EeCCCcc
Q 025273          246 VVAGGMP  252 (255)
Q Consensus       246 ~~dgG~~  252 (255)
                      ++|||+.
T Consensus       240 ~i~~g~~  246 (247)
T PRK12935        240 NINGGLY  246 (247)
T ss_pred             EeCCCcc
Confidence            9999963

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-38  Score=260.15  Aligned_cols=237  Identities=30%  Similarity=0.469  Sum_probs=204.9

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|||||++|||+++++.|+++|++|++++|+ .+.++.+.+++....  .....+++|+++.++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 666666666665432  2456688999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++|||||... ..++.+.+.+++++++++|+.+++.+++.+++.|+  +.++|+++||..+..+.+.+..|+++|++++.
T Consensus        82 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~  160 (251)
T PRK07069         82 VLVNNAGVGS-FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS  160 (251)
T ss_pred             EEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence            9999999865 46677888999999999999999999999999986  35799999999999888899999999999999


Q ss_pred             HHHHHHHHhCC---CeeEEEEeCCcccCCcccccc---CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          170 LTKALAAEMAP---DTRVNCVAPGFVPTHFAEYIT---SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       170 l~~~la~e~~~---~v~v~~v~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++++++.|+.+   +|+++.|+||+++|++.....   ..+..........+.+++.+|+|++..+.+++++...+++|+
T Consensus       161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  240 (251)
T PRK07069        161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGA  240 (251)
T ss_pred             HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence            99999999865   599999999999999875432   122333334445667788899999999999999988899999


Q ss_pred             EEEeCCCcc
Q 025273          244 TLVVAGGMP  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      .+.+|||..
T Consensus       241 ~i~~~~g~~  249 (251)
T PRK07069        241 ELVIDGGIC  249 (251)
T ss_pred             EEEECCCee
Confidence            999999965

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=1.2e-38  Score=260.91  Aligned_cols=237  Identities=24%  Similarity=0.357  Sum_probs=199.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...  ...+.+++||+++.++++++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999988888777776433  3356677999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCC--CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCC---------
Q 025273           88 GKIDVVVSNAAANPS--VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQ---------  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~---------  154 (255)
                      +++|++|||||....  ...+.+.+.+++++.+++|+.+++.++++++++|+  +.++||++||..+..+.         
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence            999999999986421  34677889999999999999999999999999985  45799999998765321         


Q ss_pred             -CCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHh
Q 025273          155 -SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       155 -~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  232 (255)
                       .....|+++|+++++|+++++.|+.+ +|+++.++||++.++..      ...........+..++.+|+|+++.+.++
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l  235 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP------EAFLNAYKKCCNGKGMLDPDDICGTLVFL  235 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC------HHHHHHHHhcCCccCCCCHHHhhhhHhhe
Confidence             12246999999999999999999987 99999999999987642      12222233334566788999999999999


Q ss_pred             cCCCCCCccccEEEeCCCcc
Q 025273          233 ASDDASYITGETLVVAGGMP  252 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~  252 (255)
                      +++...+++|+.+.+|||+.
T Consensus       236 ~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        236 LSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             eccccccccCceEEecCCcc
Confidence            99888899999999999974

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=7.4e-39  Score=263.80  Aligned_cols=236  Identities=30%  Similarity=0.398  Sum_probs=190.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhc-CCeEEEEEecCCCHHHH----HHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQR----KNLINQTIEK   86 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v----~~~~~~~~~~   86 (255)
                      ++++||||++|||++++++|+++|++|++++| +.+.++.+.+++... +.++.++++|+++.+++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            58999999999999999999999999999875 456666666666443 45777899999999865    5566666677


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCH-----------HHHHHHHHHHhHHHHHHHHHHhhcccC--------CCeEEEEcc
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKE-----------SVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISS  147 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~iv~iss  147 (255)
                      ++++|+||||||.... .++.+.+.           ++|.+.+++|+.+++.+++++.+.|++        .++|++++|
T Consensus        82 ~g~iD~lv~nAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        82 FGRCDVLVNNASAFYP-TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             cCCceEEEECCccCCC-CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            8999999999997542 23333222           358999999999999999999998842        357999999


Q ss_pred             cCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccC-CCCCHHHH
Q 025273          148 IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLN-RLGTTRDM  225 (255)
Q Consensus       148 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~  225 (255)
                      ..+..+.+.+.+|++||+|+++|+++++.|+.+ ||++++|+||+++|+...   . ......+....+.+ +..+|+|+
T Consensus       161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~v  236 (267)
T TIGR02685       161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM---P-FEVQEDYRRKVPLGQREASAEQI  236 (267)
T ss_pred             hhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc---c-hhHHHHHHHhCCCCcCCCCHHHH
Confidence            999888899999999999999999999999988 999999999999876321   1 11222233334443 67899999


Q ss_pred             HHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          226 AAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       226 a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++.++|++++...+++|+.+.+|||+..
T Consensus       237 a~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       237 ADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             HHHHHHHhCcccCCcccceEEECCceec
Confidence            9999999999889999999999999864

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-38  Score=260.30  Aligned_cols=239  Identities=31%  Similarity=0.461  Sum_probs=201.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .++||++|||||+||||.+++++|+++|++|++++|+...++...+++.     ..++++|++++++++++++++.+.++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETYG   78 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            3679999999999999999999999999999999999776665554431     25788999999999999999998889


Q ss_pred             CCCEEEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCC-CCChhhHhhH
Q 025273           89 KIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQ-SSMAMYGVTK  164 (255)
Q Consensus        89 ~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~-~~~~~y~~sK  164 (255)
                      ++|++|||||.... ..++.+.+.+.+++.+++|+.+++.+++.++|+|+  +.++||++||..+..+. ++...|+.+|
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sK  158 (255)
T PRK06057         79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASK  158 (255)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHH
Confidence            99999999997642 34567788899999999999999999999999885  45799999998765554 4678899999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC-hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      ++++.+++.++.++.+ +|+++.|+||+++|++....... .....+.....+.+++.+|+|+++.+.+++++...+++|
T Consensus       159 aal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g  238 (255)
T PRK06057        159 GGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFITA  238 (255)
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            9999999999999987 99999999999999986544321 111122223346678899999999999999999999999


Q ss_pred             cEEEeCCCcc
Q 025273          243 ETLVVAGGMP  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      +.+.+|||+.
T Consensus       239 ~~~~~~~g~~  248 (255)
T PRK06057        239 STFLVDGGIS  248 (255)
T ss_pred             cEEEECCCee
Confidence            9999999975

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-38  Score=259.30  Aligned_cols=243  Identities=30%  Similarity=0.442  Sum_probs=211.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+.++...+++...+.++.+++||++++++++++++.+.+.++.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999999998888887777766778999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|++|||+|... .....+.+.+++++.+++|+.+++.+.+.+++.|+  +.++||++||..+..+.++...|+++|+++
T Consensus        82 ~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~  160 (258)
T PRK12429         82 VDILVNNAGIQH-VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGL  160 (258)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHH
Confidence            999999999765 45677788899999999999999999999999985  457999999999998999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC---------h-hHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------D-GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      +.+++.++.++.+ +|+++.++||+++|++.......         . ..........+.+++.+++|+++.+.+++++.
T Consensus       161 ~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  240 (258)
T PRK12429        161 IGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA  240 (258)
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcc
Confidence            9999999999887 99999999999999876432110         0 11122233345567899999999999999887


Q ss_pred             CCCccccEEEeCCCccc
Q 025273          237 ASYITGETLVVAGGMPS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      ...++|+++.+|||++.
T Consensus       241 ~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        241 AKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             ccCccCCeEEeCCCEec
Confidence            77889999999999864

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=4e-38  Score=255.55  Aligned_cols=237  Identities=30%  Similarity=0.428  Sum_probs=206.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |++|||||+++||++++++|+++|++|+++.| +.+..+...+++...+.++.++++|++++++++++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999999888 55555555555555567899999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++|||+|... ...+.+.+.+++++.+++|+.+++.+.+.+.+.|+  +.++||++||..+..+.+++..|+++|++++.
T Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~  159 (242)
T TIGR01829        81 VLVNNAGITR-DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG  159 (242)
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence            9999999865 45677888999999999999999999999999986  34689999999988888899999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeC
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA  248 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      ++++++.++.+ +++++.++||+++|++.....  +..........+..++.+|+|+++.+.|+++++..+++|+.+.+|
T Consensus       160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~  237 (242)
T TIGR01829       160 FTKALAQEGATKGVTVNTISPGYIATDMVMAMR--EDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSIN  237 (242)
T ss_pred             HHHHHHHHhhhhCeEEEEEeeCCCcCccccccc--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence            99999999877 999999999999999875432  233333444567788899999999999999988888999999999


Q ss_pred             CCcc
Q 025273          249 GGMP  252 (255)
Q Consensus       249 gG~~  252 (255)
                      ||.+
T Consensus       238 gg~~  241 (242)
T TIGR01829       238 GGLY  241 (242)
T ss_pred             CCcc
Confidence            9975

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-38  Score=255.86  Aligned_cols=230  Identities=20%  Similarity=0.264  Sum_probs=198.8

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCC--HHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSN--GQQRKNLINQTI   84 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~--~~~v~~~~~~~~   84 (255)
                      .++++|+++||||+||||++++++|+++|++|++++|+.+.++...+++... +..+.++++|+++  .++++++++++.
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence            4467899999999999999999999999999999999998888777777544 3467788999975  678999999999


Q ss_pred             HHh-CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhH
Q 025273           85 EKF-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        85 ~~~-g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      +.+ +.+|++|||||......++.+.+.++|++.+++|+.+++.+++.+++.|.  +.++++++||..+..+.+.+..|+
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~  161 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFG  161 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchH
Confidence            888 88999999999765456778899999999999999999999999999886  357999999999998888889999


Q ss_pred             hhHHHHHHHHHHHHHHhCC--CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          162 VTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~--~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +||++++.|++.++.|+.+  +|||+.|+||+++|++.........          .....+++|+++.+.|++++.+.+
T Consensus       162 ~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  231 (239)
T PRK08703        162 ASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA----------KSERKSYGDVLPAFVWWASAESKG  231 (239)
T ss_pred             HhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC----------ccccCCHHHHHHHHHHHhCccccC
Confidence            9999999999999999976  6999999999999998654322111          123458999999999999998999


Q ss_pred             ccccEEEe
Q 025273          240 ITGETLVV  247 (255)
Q Consensus       240 ~~G~~i~~  247 (255)
                      ++|++|.+
T Consensus       232 ~~g~~~~~  239 (239)
T PRK08703        232 RSGEIVYL  239 (239)
T ss_pred             cCCeEeeC
Confidence            99999864

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-38  Score=262.05  Aligned_cols=227  Identities=26%  Similarity=0.406  Sum_probs=192.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++++|+++.++++++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999988888877777667789999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-C--CCeEEEEcccCccCCCCCChhhHhhH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-K--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~--~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|. .  +++||++||..++.+.++...|+++|
T Consensus        82 g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (275)
T PRK05876         82 GHVDVVFSNAGIVV-GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAK  160 (275)
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHH
Confidence            99999999999865 46788899999999999999999999999999885 2  57999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChh-------HHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG-------VRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      +++.+|+++++.|+.+ +|+++.|+||+++|++.........       .............+.+|+|+++.++..+..
T Consensus       161 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~  239 (275)
T PRK05876        161 YGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA  239 (275)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHc
Confidence            9999999999999987 9999999999999997643211000       000001111123467999999998877644

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=6.4e-38  Score=286.45  Aligned_cols=251  Identities=27%  Similarity=0.349  Sum_probs=213.8

Q ss_pred             cccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHH
Q 025273            3 KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus         3 ~~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      +|.....+++|++|||||+||||++++++|+++|++|++++|+.+.++...+++...  ..++..+++|+++.+++++++
T Consensus       405 ~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~  484 (676)
T TIGR02632       405 RMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAF  484 (676)
T ss_pred             cCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHH
Confidence            344455688999999999999999999999999999999999988877777766543  246788999999999999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCC
Q 025273           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSM  157 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~  157 (255)
                      +++.+.+|++|++|||||... ..++.+.+.++|+..+++|+.+++.+.+.+++.|++   +++||++||..+..+.+..
T Consensus       485 ~~i~~~~g~iDilV~nAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~  563 (676)
T TIGR02632       485 ADVALAYGGVDIVVNNAGIAT-SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNA  563 (676)
T ss_pred             HHHHHhcCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCC
Confidence            999999999999999999765 466778889999999999999999999999998863   4689999999988888899


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCC--cccccc----------CChhHHHHHHhhcccCCCCCHHH
Q 025273          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTH--FAEYIT----------SNDGVRQTIEQNTLLNRLGTTRD  224 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~--~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~d  224 (255)
                      ..|+++|++++.++++++.|+.+ +||+|+|+||++.++  +.....          ........+....++++.++|+|
T Consensus       564 ~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peD  643 (676)
T TIGR02632       564 SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPAD  643 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHH
Confidence            99999999999999999999988 999999999998653  221100          11222333455667888999999


Q ss_pred             HHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          225 MAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       225 ~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++++.+++++...+++|+.+++|||.+..
T Consensus       644 VA~av~~L~s~~~~~~TG~~i~vDGG~~~~  673 (676)
T TIGR02632       644 IAEAVFFLASSKSEKTTGCIITVDGGVPAA  673 (676)
T ss_pred             HHHHHHHHhCCcccCCcCcEEEECCCchhc
Confidence            999999999888888999999999998764

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1e-37  Score=255.26  Aligned_cols=240  Identities=28%  Similarity=0.422  Sum_probs=203.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||||+|+||++++++|+++|++|++++|+.. ..+...+.+...+.++.++++|++++++++++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            478999999999999999999999999999998743 4444555555556689999999999999999999999999999


Q ss_pred             CEEEEcCCCCC-CCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--------CCeEEEEcccCccCCCCCChhhH
Q 025273           91 DVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        91 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      |++|||+|... ..+++.+.+.++|++.+++|+.+++.+++.+.+.|++        .+++|++||..+..+.+....|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            99999999753 2356778889999999999999999999999998852        35699999999988888889999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHH-hhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIE-QNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      .+|++++.+++.++.++.+ +++++.|+||+++|++......  ....... ...+.+++..|+|+++.+.+++++...+
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~  239 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA--KYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPY  239 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch--hHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcccc
Confidence            9999999999999999877 9999999999999987654321  1111111 1346677889999999999999888788


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+.+++|||+..
T Consensus       240 ~~G~~~~i~gg~~~  253 (256)
T PRK12745        240 STGQAIHVDGGLSI  253 (256)
T ss_pred             cCCCEEEECCCeec
Confidence            99999999999875

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-37  Score=252.30  Aligned_cols=243  Identities=34%  Similarity=0.521  Sum_probs=202.7

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++++++++|||||+|+||++++++|+++|++|++..|+ .+........+...+.++.++.+|+++.++++++++++.+.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999998887754 34444444555555667888999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++++|.+|||||... ..++.+.+.+.+++.+++|+.+++.+++++.+.+++.+++|++||..++.+.++...|+++|++
T Consensus        82 ~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~  160 (252)
T PRK06077         82 YGVADILVNNAGLGL-FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAA  160 (252)
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHH
Confidence            999999999999854 4567778888899999999999999999999999877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChh--HHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDG--VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       167 ~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      ++.++++++.++.++++++.+.||+++|++.........  .........+.+++.+|+|+++.++++++.  ...+|+.
T Consensus       161 ~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~--~~~~g~~  238 (252)
T PRK06077        161 VINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI--ESITGQV  238 (252)
T ss_pred             HHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCc--cccCCCe
Confidence            999999999999879999999999999997644322111  111112223456789999999999999964  3478999


Q ss_pred             EEeCCCccc
Q 025273          245 LVVAGGMPS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +++|+|.+.
T Consensus       239 ~~i~~g~~~  247 (252)
T PRK06077        239 FVLDSGESL  247 (252)
T ss_pred             EEecCCeec
Confidence            999999764

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=7.7e-38  Score=254.74  Aligned_cols=221  Identities=23%  Similarity=0.297  Sum_probs=188.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |++|||||++|||++++++|+ +|++|++++|+.++++.+.+++...+. ++.+++||+++.++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 599999999999999988888876543 588899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-C--CCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-K--GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ++|||||... ..+..+.+.+.+.+++++|+.+++.+.+.++|.|. +  .++||++||..+..+.+.+..|+++|+|++
T Consensus        80 ~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  158 (246)
T PRK05599         80 LAVVAFGILG-DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD  158 (246)
T ss_pred             EEEEecCcCC-CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence            9999999865 23455667778889999999999999999999885 2  489999999999988889999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +|+++++.|+.+ +|+||+++||+++|++.......             ....+|+|+++.++++++....   ++.+.+
T Consensus       159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~-------------~~~~~pe~~a~~~~~~~~~~~~---~~~~~~  222 (246)
T PRK05599        159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA-------------PMSVYPRDVAAAVVSAITSSKR---STTLWI  222 (246)
T ss_pred             HHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC-------------CCCCCHHHHHHHHHHHHhcCCC---CceEEe
Confidence            999999999987 99999999999999976432111             1135899999999999977542   345666


Q ss_pred             CCCc
Q 025273          248 AGGM  251 (255)
Q Consensus       248 dgG~  251 (255)
                      +++.
T Consensus       223 ~~~~  226 (246)
T PRK05599        223 PGRL  226 (246)
T ss_pred             CccH
Confidence            6553

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-37  Score=251.28  Aligned_cols=237  Identities=24%  Similarity=0.332  Sum_probs=199.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ..+|++|||||++|||++++++|+++|++|+++++. .+.++.+.+++...+.++.+++||+++.++++++++++.+.++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999887664 4556666666666677899999999999999999999999899


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.+.++  ..+++++++|..++.+.+.+..|+++|++
T Consensus        87 ~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a  165 (258)
T PRK09134         87 PITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAA  165 (258)
T ss_pred             CCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHH
Confidence            9999999999765 45677888999999999999999999999999886  35799999998777777888899999999


Q ss_pred             HHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       167 ~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      ++.++++++.++.++|++++++||++.|+....   .... .......+.++..+++|+++.++++++.  ..++|+.+.
T Consensus       166 ~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~---~~~~-~~~~~~~~~~~~~~~~d~a~~~~~~~~~--~~~~g~~~~  239 (258)
T PRK09134        166 LWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS---PEDF-ARQHAATPLGRGSTPEEIAAAVRYLLDA--PSVTGQMIA  239 (258)
T ss_pred             HHHHHHHHHHHhcCCcEEEEeecccccCCcccC---hHHH-HHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCCEEE
Confidence            999999999998767999999999998864211   1111 2222334567778999999999999974  458999999


Q ss_pred             eCCCccc
Q 025273          247 VAGGMPS  253 (255)
Q Consensus       247 ~dgG~~~  253 (255)
                      +|||...
T Consensus       240 i~gg~~~  246 (258)
T PRK09134        240 VDGGQHL  246 (258)
T ss_pred             ECCCeec
Confidence            9999753

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.5e-37  Score=250.87  Aligned_cols=238  Identities=26%  Similarity=0.426  Sum_probs=204.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++++++||||++++||+++++.|+++|++|++++|+.++++...+++...+.++.++++|+++.++++++++.+.+.+++
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999999988888777777666778999999999999999999999888889


Q ss_pred             CCEEEEcCCCCCCC-------CCc-cCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCCh
Q 025273           90 IDVVVSNAAANPSV-------DSI-LQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMA  158 (255)
Q Consensus        90 ~d~lv~~ag~~~~~-------~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~  158 (255)
                      +|.+|||+|.....       ..+ .+.+.++++.++++|+.+++.+.+.+++.|.   .++.|+++||... .+.++..
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-~~~~~~~  161 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-AGNMGQT  161 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-cCCCCCc
Confidence            99999999975421       111 5678899999999999999999999999874   3468999988754 4667789


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      .|+++|++++.++++++.++.+ +|++++++||+++|++....  .+..........+.+++.+|+|+++.+.++++.  
T Consensus       162 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~--  237 (253)
T PRK08217        162 NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMIPVGRLGEPEEIAHTVRFIIEN--  237 (253)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc--CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHcC--
Confidence            9999999999999999999877 99999999999999987543  234444455566778889999999999999953  


Q ss_pred             CCccccEEEeCCCcc
Q 025273          238 SYITGETLVVAGGMP  252 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~  252 (255)
                      .+++|+++.+|||+.
T Consensus       238 ~~~~g~~~~~~gg~~  252 (253)
T PRK08217        238 DYVTGRVLEIDGGLR  252 (253)
T ss_pred             CCcCCcEEEeCCCcc
Confidence            578999999999974

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-37  Score=263.06  Aligned_cols=223  Identities=20%  Similarity=0.283  Sum_probs=195.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++.+.+.+
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            45778999999999999999999999999999999999998888888887777889999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++++|++  .++||++||..++.+.+....|+++|+
T Consensus        84 g~iD~lInnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~  162 (334)
T PRK07109         84 GPIDTWVNNAMVTV-FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKH  162 (334)
T ss_pred             CCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHH
Confidence            99999999999765 567888999999999999999999999999999863  589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC---CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          166 ALLGLTKALAAEMAP---DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~---~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      +++.|+++++.|+.+   +|+++.|+||+++|++........     .....+..++.+|+|+|+.++++++..
T Consensus       163 a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~-----~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        163 AIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRL-----PVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhc-----cccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999853   699999999999999764321110     011223456779999999999999765

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.6e-37  Score=249.48  Aligned_cols=241  Identities=39%  Similarity=0.573  Sum_probs=210.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|++|||||+|+||++++++|+++|++|+++ +|+.+..+...+.+...+.++.++++|+++.++++++++.+.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999998 999887777777766556688999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +++|++||++|... ..++.+.+.+++++.+++|+.+++.+.+.+.+.++  +.+++|++||..+..+.+....|+.+|+
T Consensus        82 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~  160 (247)
T PRK05565         82 GKIDILVNNAGISN-FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKG  160 (247)
T ss_pred             CCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHH
Confidence            99999999999874 56677889999999999999999999999999885  3578999999988888888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.++++++.++.. ++++++++||+++|++.+.....  .........+.++..+++|+++.+.+++++....++|+.
T Consensus       161 a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~  238 (247)
T PRK05565        161 AVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE--DKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQI  238 (247)
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH--HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcE
Confidence            999999999999876 99999999999999887654321  222222345566778999999999999999988999999


Q ss_pred             EEeCCCcc
Q 025273          245 LVVAGGMP  252 (255)
Q Consensus       245 i~~dgG~~  252 (255)
                      +.+|+|+.
T Consensus       239 ~~~~~~~~  246 (247)
T PRK05565        239 ITVDGGWT  246 (247)
T ss_pred             EEecCCcc
Confidence            99999975

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-37  Score=249.56  Aligned_cols=239  Identities=31%  Similarity=0.517  Sum_probs=204.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC----chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK----QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      .++++|++|||||+|+||++++++|+++|++|++++|.    .+..+...+++...+.++.++.+|+++.++++++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999999997653    44444555556555678899999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHh-hccc--CCCeEEEEcccCccCCCCCChhh
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAA-PHLQ--KGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~--~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      .+.++++|.+|||+|... ..++.+.+.++|++.+++|+.+++.+++.+. +.++  ..+++|++||..+..+.++...|
T Consensus        82 ~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y  160 (249)
T PRK12827         82 VEEFGRLDILVNNAGIAT-DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNY  160 (249)
T ss_pred             HHHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchh
Confidence            998899999999999865 4677788899999999999999999999999 5554  34689999999998888899999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +.+|++++.++++++.++.+ +++++.++||+++|++......    ..+.....+...+.+++|+++.+.+++++....
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (249)
T PRK12827        161 AASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAP----TEHLLNPVPVQRLGEPDEVAALVAFLVSDAASY  236 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccch----HHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999887 9999999999999997654321    123344456667779999999999999888888


Q ss_pred             ccccEEEeCCCc
Q 025273          240 ITGETLVVAGGM  251 (255)
Q Consensus       240 ~~G~~i~~dgG~  251 (255)
                      ++|+.+.+|||+
T Consensus       237 ~~g~~~~~~~g~  248 (249)
T PRK12827        237 VTGQVIPVDGGF  248 (249)
T ss_pred             ccCcEEEeCCCC
Confidence            999999999996

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=7e-37  Score=249.46  Aligned_cols=242  Identities=36%  Similarity=0.528  Sum_probs=211.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++++...+++...+.++.++.+|+++.++++++++++.+.+++
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999988777777777666677999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCcc-CCCCCChhhHhhHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGY-QPQSSMAMYGVTKTA  166 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~-~~~~~~~~y~~sK~a  166 (255)
                      +|++||++|... ..++.+.+.+++++.+++|+.+++.+.+.+++.|+  +.++++++||..+. .+.+....|+.+|++
T Consensus        84 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a  162 (251)
T PRK12826         84 LDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAG  162 (251)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHH
Confidence            999999999876 46677888999999999999999999999999885  45789999999888 778888999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.+++.++.++.+ +++++.++||.++|+........ ..........+.+++.+++|+++.+.++++....+++|+.+
T Consensus       163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~  241 (251)
T PRK12826        163 LVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA-QWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTL  241 (251)
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEE
Confidence            99999999999876 99999999999999976544321 11223334456678899999999999999888788999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||...
T Consensus       242 ~~~~g~~~  249 (251)
T PRK12826        242 PVDGGATL  249 (251)
T ss_pred             EECCCccC
Confidence            99999754

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1e-37  Score=262.00  Aligned_cols=236  Identities=16%  Similarity=0.127  Sum_probs=192.9

Q ss_pred             EEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Q 025273           16 IVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (255)
Q Consensus        16 lItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv   94 (255)
                      |||||++|||++++++|+++| ++|++++|+.+.++...+++...+.++.++++|+++.++++++++++.+.++++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999998887777777654456788899999999999999999988888999999


Q ss_pred             EcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC----CCeEEEEcccCccCC-----------------
Q 025273           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQP-----------------  153 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~iv~iss~~~~~~-----------------  153 (255)
                      ||||+.....+..+.+.++|++++++|+.|++.+++.++|.|++    +++||++||..+..+                 
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            99998643345667889999999999999999999999999852    479999999876421                 


Q ss_pred             ------------------CCCChhhHhhHHHHHHHHHHHHHHhCC--CeeEEEEeCCcc-cCCccccccCChhHHHHHHh
Q 025273          154 ------------------QSSMAMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFV-PTHFAEYITSNDGVRQTIEQ  212 (255)
Q Consensus       154 ------------------~~~~~~y~~sK~a~~~l~~~la~e~~~--~v~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~  212 (255)
                                        ..++..|++||+|...+++.+++++.+  +|++++|+||++ .|++.+..............
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~  240 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQ  240 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHH
Confidence                              124567999999999999999999853  899999999999 78887543211110001112


Q ss_pred             hcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCc
Q 025273          213 NTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       213 ~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ..+.+++.+|++.++.+++++++.....+|+.+..||+.
T Consensus       241 ~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        241 KYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            234456789999999999999987777899999988863

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-37  Score=250.65  Aligned_cols=239  Identities=27%  Similarity=0.348  Sum_probs=204.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.++.+.+.+.  +.++.++++|+++.+++..+++++.++++++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999999999887777666552  35788899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++||++|... ..++.+.+.++|.+.+++|+.+++.+.+++.+.++  +.++++++||..+..+ .+...|+.+|++++.
T Consensus        80 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~  157 (257)
T PRK07074         80 VLVANAGAAR-AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIH  157 (257)
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHH
Confidence            9999999865 35667788899999999999999999999998875  4578999999876543 356789999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCcccccc-CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT-SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      ++++++.++.+ +++++.++||+++|++..... ..+..........+..++..++|+++++.+++++...+++|+.+.+
T Consensus       158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~  237 (257)
T PRK07074        158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPV  237 (257)
T ss_pred             HHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEe
Confidence            99999999988 999999999999998754322 1233333333455678899999999999999988778899999999


Q ss_pred             CCCcccC
Q 025273          248 AGGMPSR  254 (255)
Q Consensus       248 dgG~~~~  254 (255)
                      |+|+...
T Consensus       238 ~~g~~~~  244 (257)
T PRK07074        238 DGGLTAG  244 (257)
T ss_pred             CCCcCcC
Confidence            9998764

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.8e-36  Score=246.44  Aligned_cols=241  Identities=35%  Similarity=0.569  Sum_probs=207.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++||||++|+||++++++|+++|++|++++|+... .+...+++...+.++.++.+|+++.+++.++++++.+.++
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999888877653 4455555655567899999999999999999999999899


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|.+||++|... .....+.+.+.+++.+++|+.+++.+.+.+.+.+.+  .++++++||..+..+.+....|+++|++
T Consensus        83 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a  161 (248)
T PRK05557         83 GVDILVNNAGITR-DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAG  161 (248)
T ss_pred             CCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHH
Confidence            9999999999865 356667888999999999999999999999998853  4689999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.+++.++.++.+ +++++.++||+++|++....  .+..........+.+++.+++|++..+.+++.+....++|+.+
T Consensus       162 ~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  239 (248)
T PRK05557        162 VIGFTKSLARELASRGITVNAVAPGFIETDMTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTL  239 (248)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc--ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccEE
Confidence            99999999999877 99999999999999876544  2233344445556677889999999999999887778999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      ++|||++.
T Consensus       240 ~i~~~~~~  247 (248)
T PRK05557        240 HVNGGMVM  247 (248)
T ss_pred             EecCCccC
Confidence            99999764

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-37  Score=250.59  Aligned_cols=247  Identities=29%  Similarity=0.442  Sum_probs=208.4

Q ss_pred             cccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         5 ~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +|+..+++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.++....  ++.++.+|++++++++++++++.
T Consensus         4 ~~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~   81 (264)
T PRK12829          4 DLLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAV   81 (264)
T ss_pred             hHhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHH
Confidence            3556688999999999999999999999999999999999987776665555322  67889999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--C-CeEEEEcccCccCCCCCChhhH
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--G-SSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~-~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      +.++++|++||++|.........+.+.+++++++++|+.+++.+++.+.+.+++  . +.|+++||..+..+.+....|+
T Consensus        82 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~  161 (264)
T PRK12829         82 ERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYA  161 (264)
T ss_pred             HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhH
Confidence            999999999999998744566778889999999999999999999999988753  2 5799999988888888889999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC---------hhHHHHHHhhcccCCCCCHHHHHHHHHH
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------DGVRQTIEQNTLLNRLGTTRDMAAAAAF  231 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~d~a~~~~~  231 (255)
                      .+|++++.+++.++.++.. +++++.+.||+++|++.......         ...........+.+++.+++|+++.+.+
T Consensus       162 ~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  241 (264)
T PRK12829        162 ASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALF  241 (264)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999876 89999999999999876543211         1112222333456678999999999999


Q ss_pred             hcCCCCCCccccEEEeCCCccc
Q 025273          232 LASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++++....++|+.+.+|||..+
T Consensus       242 l~~~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        242 LASPAARYITGQAISVDGNVEY  263 (264)
T ss_pred             HcCccccCccCcEEEeCCCccc
Confidence            9987767789999999999864

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-36  Score=247.75  Aligned_cols=238  Identities=26%  Similarity=0.361  Sum_probs=202.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |++|||||+|+||++++++|+++|++|+++ .|+.+..+....++...+.++.++++|++++++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            689999999999999999999999998774 6777766666666666667888999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-----CCeEEEEcccCccCCCCC-ChhhHhhHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSS-MAMYGVTKT  165 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~iss~~~~~~~~~-~~~y~~sK~  165 (255)
                      ++|||+|......++.+.+.++|+..+++|+.+++.+++.+++.+.+     ++++|++||..+..+.+. +..|+++|+
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKG  161 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHH
Confidence            99999998654566788899999999999999999999999998752     468999999988776664 468999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.++++++.++.+ ++++++++||+++|++..... .+..........+.++..+|+|+++.+.+++++...+++|+.
T Consensus       162 ~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~  240 (247)
T PRK09730        162 AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG-EPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSF  240 (247)
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcE
Confidence            999999999999877 999999999999999754322 222233344455666777999999999999998878899999


Q ss_pred             EEeCCCc
Q 025273          245 LVVAGGM  251 (255)
Q Consensus       245 i~~dgG~  251 (255)
                      +.+|||.
T Consensus       241 ~~~~g~~  247 (247)
T PRK09730        241 IDLAGGK  247 (247)
T ss_pred             EecCCCC
Confidence            9999984

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=2.9e-36  Score=245.49  Aligned_cols=243  Identities=32%  Similarity=0.448  Sum_probs=202.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++++|||||+|+||++++++|+++|++|++++|+. +..+...+.+... +..+.++++|+++.+++.++++++.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4579999999999999999999999999999999864 4445555555443 3468889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      +++|++|||||... ..++.+.+.++++.++++|+.+++.+++++.+.+. ..+.+++++|..+..+.++...|+.+|++
T Consensus        84 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  162 (249)
T PRK09135         84 GRLDALVNNASSFY-PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAA  162 (249)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHH
Confidence            99999999999765 35566778889999999999999999999999885 46788888888888888889999999999


Q ss_pred             HHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       167 ~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      ++.+++.++.++.++++++.+.||++.|++...... ...........+..+..+++|+++.+.+++.+ ....+|++++
T Consensus       163 ~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g~~~~  240 (249)
T PRK09135        163 LEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFD-EEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITGQILA  240 (249)
T ss_pred             HHHHHHHHHHHHCCCCeEEEEEeccccCccccccCC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccCcEEE
Confidence            999999999999778999999999999998643222 22222333444566778999999999888865 4457999999


Q ss_pred             eCCCcccCC
Q 025273          247 VAGGMPSRL  255 (255)
Q Consensus       247 ~dgG~~~~~  255 (255)
                      +++|...++
T Consensus       241 i~~g~~~~~  249 (249)
T PRK09135        241 VDGGRSLTL  249 (249)
T ss_pred             ECCCeeccC
Confidence            999998764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-36  Score=267.75  Aligned_cols=236  Identities=27%  Similarity=0.396  Sum_probs=199.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch--hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++|++|||||++|||++++++|+++|++|++++|...  .++...+++     ...++++|+++.++++++++.+.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----GGTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            367899999999999999999999999999999998532  222222222     2346889999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhh--cccCCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP--HLQKGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++|||||+.. ...+.+.+.++|++++++|+.+++++.+.+.+  .++++++||++||..+..+.+.+..|+++|
T Consensus       282 ~g~id~vi~~AG~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asK  360 (450)
T PRK08261        282 HGGLDIVVHNAGITR-DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASK  360 (450)
T ss_pred             CCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHH
Confidence            999999999999876 46778889999999999999999999999998  445778999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.|+++++.++.+ +|++|+|+||+++|++.......  ..+......++.+...|+|+++.+.|++++...++||+
T Consensus       361 aal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~--~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~  438 (450)
T PRK08261        361 AGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFA--TREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGN  438 (450)
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh--HHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCC
Confidence            9999999999999988 99999999999999887544221  11222223456677899999999999999988999999


Q ss_pred             EEEeCCCcc
Q 025273          244 TLVVAGGMP  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      +|.+|||..
T Consensus       439 ~i~v~g~~~  447 (450)
T PRK08261        439 VVRVCGQSL  447 (450)
T ss_pred             EEEECCCcc
Confidence            999999853

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-36  Score=244.17  Aligned_cols=227  Identities=27%  Similarity=0.422  Sum_probs=192.5

Q ss_pred             EEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Q 025273           16 IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVS   95 (255)
Q Consensus        16 lItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~   95 (255)
                      |||||++|||++++++|+++|++|++++|+.+.++...+++. .+.++.++.+|+++.+++++++++    ++++|++||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAE----AGPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHh----cCCCCEEEE
Confidence            699999999999999999999999999999877776665554 256788899999999999888875    478999999


Q ss_pred             cCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHHHHH
Q 025273           96 NAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA  175 (255)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la  175 (255)
                      |+|... ..++.+.+.+++++++++|+.+++++.+  .+.+.+.++||++||..++.+.++...|+++|+++++++++++
T Consensus        76 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la  152 (230)
T PRK07041         76 TAADTP-GGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLA  152 (230)
T ss_pred             CCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHH
Confidence            999865 4567788899999999999999999999  4566677899999999999998999999999999999999999


Q ss_pred             HHhCCCeeEEEEeCCcccCCccccccCC--hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          176 AEMAPDTRVNCVAPGFVPTHFAEYITSN--DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       176 ~e~~~~v~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .|+.+ +|++.++||+++|++.......  ...........+.++..+|+|+++.+.++++.  .+++|+.+.+|||+..
T Consensus       153 ~e~~~-irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gg~~~  229 (230)
T PRK07041        153 LELAP-VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDGGHAI  229 (230)
T ss_pred             HHhhC-ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCCCeec
Confidence            99876 9999999999999986543221  22233344455677788999999999999974  5789999999999753

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-37  Score=249.48  Aligned_cols=233  Identities=24%  Similarity=0.278  Sum_probs=189.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++|||||+||||++++++|+++|++|++++|+.+ ..+.+.+++...+.++.++++|+++.++++++++++.+.++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            56899999999999999999999999999999999753 45556666655566788999999999999999999998889


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-----CCCCCChhhHhh
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----QPQSSMAMYGVT  163 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-----~~~~~~~~y~~s  163 (255)
                      .+|++|||||.... .   ..   .++..+++|+.+++++++.+.++|++.+++|++||..+.     .+.+.+..|+.+
T Consensus        84 ~~d~vi~~ag~~~~-~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~s  156 (248)
T PRK07806         84 GLDALVLNASGGME-S---GM---DEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARS  156 (248)
T ss_pred             CCcEEEECCCCCCC-C---CC---CcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHH
Confidence            99999999986431 1   11   245678999999999999999999777899999996543     233446789999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC--ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      |++++.+++.++.++.+ +|+++.|+||++.|++......  .+...  .....+.+++++|+|+++.+.++++.  .++
T Consensus       157 K~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~dva~~~~~l~~~--~~~  232 (248)
T PRK07806        157 KRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAI--EARREAAGKLYTVSEFAAEVARAVTA--PVP  232 (248)
T ss_pred             HHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHH--HHHHhhhcccCCHHHHHHHHHHHhhc--ccc
Confidence            99999999999999988 9999999999999987543321  11111  12234667899999999999999973  467


Q ss_pred             cccEEEeCCCccc
Q 025273          241 TGETLVVAGGMPS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      +|++++++||...
T Consensus       233 ~g~~~~i~~~~~~  245 (248)
T PRK07806        233 SGHIEYVGGADYF  245 (248)
T ss_pred             CccEEEecCccce
Confidence            9999999999754

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=3.3e-36  Score=253.34  Aligned_cols=239  Identities=15%  Similarity=0.113  Sum_probs=189.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .+|++|||||++|||++++++|+++| ++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999 99999999998887777776544567888999999999999999999888899


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC----CCeEEEEcccCccCC------------
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQP------------  153 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~iv~iss~~~~~~------------  153 (255)
                      +|++|||||+........+.+.++|++++++|+.+++.+++.++|+|++    .++||++||..+..+            
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            9999999997543333456788999999999999999999999999963    379999999876421            


Q ss_pred             ---------------------CCCChhhHhhHHHHHHHHHHHHHHhC-C-CeeEEEEeCCcc-cCCccccccCChhHHHH
Q 025273          154 ---------------------QSSMAMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFV-PTHFAEYITSNDGVRQT  209 (255)
Q Consensus       154 ---------------------~~~~~~y~~sK~a~~~l~~~la~e~~-~-~v~v~~v~pg~v-~t~~~~~~~~~~~~~~~  209 (255)
                                           ..++..|++||+|+..+++.+++++. + +|++++|+||++ +|++.............
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~  241 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFP  241 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHH
Confidence                                 12456799999999999999999984 3 899999999999 69987543211100001


Q ss_pred             HHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCC
Q 025273          210 IEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       210 ~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                      .......+++.+|++.++.+++++.+.....+|..+..++
T Consensus       242 ~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       242 PFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             HHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence            1111122345689999999988877654445677776544

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.4e-35  Score=240.81  Aligned_cols=240  Identities=36%  Similarity=0.558  Sum_probs=209.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +.+|++|||||+|+||++++++|+++|++|++++|+.+..+....++...+.++.++.+|+++++++.++++++.+.+++
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            34789999999999999999999999999999999988877777777766778999999999999999999999988999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|.+||++|... ..+..+.+.+++++.++.|+.+++++.+.+.++++  +.++||++||..+..+..+...|+.+|+++
T Consensus        83 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~  161 (246)
T PRK05653         83 LDILVNNAGITR-DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGV  161 (246)
T ss_pred             CCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHH
Confidence            999999999865 35667788899999999999999999999999885  346999999998888888889999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.+++++++++.+ +++++.++||.+.+++.....  ...........+.+.+.+++|+++.+.+++++....++|+.+.
T Consensus       162 ~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~  239 (246)
T PRK05653        162 IGFTKALALELASRGITVNAVAPGFIDTDMTEGLP--EEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIP  239 (246)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEE
Confidence            9999999999877 999999999999998764321  1222233344566778899999999999998887889999999


Q ss_pred             eCCCcc
Q 025273          247 VAGGMP  252 (255)
Q Consensus       247 ~dgG~~  252 (255)
                      ++||..
T Consensus       240 ~~gg~~  245 (246)
T PRK05653        240 VNGGMY  245 (246)
T ss_pred             eCCCee
Confidence            999975

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.4e-36  Score=274.08  Aligned_cols=244  Identities=32%  Similarity=0.452  Sum_probs=212.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .++||++|||||+|+||++++++|+++|++|++++|+.+.++...+++... .++.++++|++++++++++++++.+.+|
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999998877777666543 5788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.+.+.|++   +++||++||..+..+.++...|+++|+
T Consensus       498 ~iDvvI~~AG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKa  576 (681)
T PRK08324        498 GVDIVVSNAGIAI-SGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKA  576 (681)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHH
Confidence            9999999999875 567788899999999999999999999999999875   589999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcc--cCCcccccc----------CChhHHHHHHhhcccCCCCCHHHHHHHHHHh
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFV--PTHFAEYIT----------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v--~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  232 (255)
                      +++.+++.++.++.+ +|++|.|+||.+  .|++.....          ...++...+....+.+++..++|+++++.++
T Consensus       577 a~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l  656 (681)
T PRK08324        577 AELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFL  656 (681)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHH
Confidence            999999999999987 999999999999  787643221          1122223445566778889999999999999


Q ss_pred             cCCCCCCccccEEEeCCCcccC
Q 025273          233 ASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++.....+|+.+++|||....
T Consensus       657 ~s~~~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        657 ASGLLSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             hCccccCCcCCEEEECCCchhc
Confidence            9877778899999999998764

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-36  Score=241.22  Aligned_cols=228  Identities=28%  Similarity=0.385  Sum_probs=192.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .+|++|||||+++||++++++|+++|++|++++|+.+.  .       .  ...++++|+++.++++++++++.+.+ ++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~--~-------~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   69 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID--D-------F--PGELFACDLADIEQTAATLAQINEIH-PV   69 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc--c-------c--CceEEEeeCCCHHHHHHHHHHHHHhC-CC
Confidence            47899999999999999999999999999999998653  0       1  12467899999999999999988876 68


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      |++|||+|... ..++.+.+.+++++.+++|+.+++.+.+.+++.|+  +.++||++||... .+.+....|+++|++++
T Consensus        70 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~~~Y~~sK~a~~  147 (234)
T PRK07577         70 DAIVNNVGIAL-PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGALDRTSYSAAKSALV  147 (234)
T ss_pred             cEEEECCCCCC-CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCCCCchHHHHHHHHHH
Confidence            99999999865 45677788999999999999999999999999986  4579999999864 45667889999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC-hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      .++++++.|+.+ +|++++|+||+++|++....... +..........+.++..+|+|++..+.++++++..+++|+.+.
T Consensus       148 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~  227 (234)
T PRK07577        148 GCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLG  227 (234)
T ss_pred             HHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEE
Confidence            999999999987 99999999999999986543221 2222233344566777899999999999998887889999999


Q ss_pred             eCCCcc
Q 025273          247 VAGGMP  252 (255)
Q Consensus       247 ~dgG~~  252 (255)
                      +|||..
T Consensus       228 ~~g~~~  233 (234)
T PRK07577        228 VDGGGS  233 (234)
T ss_pred             ecCCcc
Confidence            999864

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-36  Score=248.21  Aligned_cols=236  Identities=21%  Similarity=0.257  Sum_probs=198.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |+++||||++|||++++++|+++|++|++++|+.+.++...+++...+. ...++++|++++++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999999999999999999998887777777665443 345678999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ++|||+|... ..++.+.+.+++++.+++|+.+++.+.++++|.|.   +.++||++||..+..+.+....|+++|++++
T Consensus        81 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  159 (272)
T PRK07832         81 VVMNIAGISA-WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR  159 (272)
T ss_pred             EEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence            9999999865 56778899999999999999999999999999884   2579999999998888888999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-----ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-----NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      +|++.++.|+.+ +|+++.|+||+++|++......     .......... ...++..+|+|+|+.+++++. ...++++
T Consensus       160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vA~~~~~~~~-~~~~~~~  237 (272)
T PRK07832        160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD-RFRGHAVTPEKAAEKILAGVE-KNRYLVY  237 (272)
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH-hcccCCCCHHHHHHHHHHHHh-cCCeEEe
Confidence            999999999987 9999999999999998765321     1111111111 124556899999999999995 4567788


Q ss_pred             cEEEeCCCc
Q 025273          243 ETLVVAGGM  251 (255)
Q Consensus       243 ~~i~~dgG~  251 (255)
                      +.+.+++|+
T Consensus       238 ~~~~~~~~~  246 (272)
T PRK07832        238 TSPDIRALY  246 (272)
T ss_pred             cCcchHHHH
Confidence            888777774

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-35  Score=242.42  Aligned_cols=230  Identities=25%  Similarity=0.366  Sum_probs=199.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecCC--CHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVS--NGQQRKNLINQTIE   85 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~--~~~~v~~~~~~~~~   85 (255)
                      .+++|++|||||+++||.+++++|+++|++|++++|+.+.++.+.+++...+ .++.++.+|++  ++++++++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999988877777776543 46677777875  78999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|++|||||......++.+.+.++|++.+++|+.+++.+++.+.+.|+  +.++||++||..+..+.+.+..|+++
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  168 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVS  168 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHH
Confidence            9999999999999876556777888999999999999999999999999885  46799999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |++++.+++.++.++.. +|+++.++||+++|++........          ...++.+|+|+++.+.+++++..++++|
T Consensus       169 K~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (247)
T PRK08945        169 KFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE----------DPQKLKTPEDIMPLYLYLMGDDSRRKNG  238 (247)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc----------cccCCCCHHHHHHHHHHHhCccccccCC
Confidence            99999999999999987 999999999999998754332221          1235679999999999999998889999


Q ss_pred             cEEEeC
Q 025273          243 ETLVVA  248 (255)
Q Consensus       243 ~~i~~d  248 (255)
                      +++...
T Consensus       239 ~~~~~~  244 (247)
T PRK08945        239 QSFDAQ  244 (247)
T ss_pred             eEEeCC
Confidence            987653

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-36  Score=241.06  Aligned_cols=235  Identities=28%  Similarity=0.379  Sum_probs=201.2

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      |++++++|++|||||+|+||++++++|+++|++|++++|+.++.....+++...  ...++.+|+++.++++++++++.+
T Consensus         1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   78 (239)
T PRK12828          1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNR   78 (239)
T ss_pred             CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999987766655555433  456678999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|++||++|... ...+.+.+.+++++.+++|+.+++.+++.+.+.++  +.+++|++||..++.+.+++..|+.+
T Consensus        79 ~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s  157 (239)
T PRK12828         79 QFGRLDALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAA  157 (239)
T ss_pred             HhCCcCEEEECCcccC-cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHH
Confidence            9999999999999765 45566778899999999999999999999999874  46799999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |++++.+++.++.++.+ +++++.+.||++.|++........          ....+..++|+++.+.+++++...+++|
T Consensus       158 k~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~~----------~~~~~~~~~dva~~~~~~l~~~~~~~~g  227 (239)
T PRK12828        158 KAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPDA----------DFSRWVTPEQIAAVIAFLLSDEAQAITG  227 (239)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCch----------hhhcCCCHHHHHHHHHHHhCcccccccc
Confidence            99999999999999877 999999999999998543222111          2234678999999999999887778899


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.+.+|||+..
T Consensus       228 ~~~~~~g~~~~  238 (239)
T PRK12828        228 ASIPVDGGVAL  238 (239)
T ss_pred             eEEEecCCEeC
Confidence            99999999753

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=6e-36  Score=247.28  Aligned_cols=219  Identities=26%  Similarity=0.347  Sum_probs=185.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++|+++||||+||||++++++|+++|++|++++|+.++++.+.    .  ..+.++++|+++.++++++++++.+.++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i   75 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S--LGVHPLSLDVTDEASIKAAVDTIIAEEGRI   75 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h--CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999999999999999999987655432    1  247788999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      |++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|++  .++||++||..+..+.+....|+++|++++
T Consensus        76 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  154 (273)
T PRK06182         76 DVLVNNAGYGS-YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALE  154 (273)
T ss_pred             CEEEECCCcCC-CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHH
Confidence            99999999865 567888899999999999999999999999999863  479999999988887788889999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC----------Chh----HHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----------NDG----VRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~----------~~~----~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      +|+++++.|+.+ +|+++.|+||+++|++......          ..+    ....+....+.+++.+|+|+|+.+++++
T Consensus       155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~  234 (273)
T PRK06182        155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAV  234 (273)
T ss_pred             HHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHH
Confidence            999999999988 9999999999999997532110          011    1122333345678889999999999999


Q ss_pred             CCC
Q 025273          234 SDD  236 (255)
Q Consensus       234 s~~  236 (255)
                      +..
T Consensus       235 ~~~  237 (273)
T PRK06182        235 TAR  237 (273)
T ss_pred             hCC
Confidence            753

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=240.83  Aligned_cols=225  Identities=23%  Similarity=0.265  Sum_probs=195.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+++...+.++.++++|+++.+++..+++++.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999888777777776666789999999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      |++|||+|... ..++.+.+.+++++.+++|+.+++.+++.+++.|+  +.++||++||..+..+.++...|+.+|++++
T Consensus        85 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~  163 (241)
T PRK07454         85 DVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA  163 (241)
T ss_pred             CEEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence            99999999865 46677888999999999999999999999999885  3579999999999888889999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      .++++++.++.+ +++++.|.||+++|++.........        ....+..+|+|+++.+.++++++...+.++.
T Consensus       164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~~--------~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~  232 (241)
T PRK07454        164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQAD--------FDRSAMLSPEQVAQTILHLAQLPPSAVIEDL  232 (241)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCcccCCcccccccccc--------cccccCCCHHHHHHHHHHHHcCCccceeeeE
Confidence            999999999987 9999999999999998542111100        1123467999999999999998866655553

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3e-35  Score=239.25  Aligned_cols=241  Identities=35%  Similarity=0.529  Sum_probs=204.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++.|++|||||+|+||++++++|+++|++|+++.|+.. ..+...+.+...+.++.++++|+++.++++++++++.+.++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999877666544 44445555555567889999999999999999999988889


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      .+|.+||++|... ...+.+.+.+++++.+++|+.+++++.+.+.++++  +.+++|++||..+..+.+....|+.+|++
T Consensus        84 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~  162 (249)
T PRK12825         84 RIDILVNNAGIFE-DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAG  162 (249)
T ss_pred             CCCEEEECCccCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHH
Confidence            9999999999754 46667788999999999999999999999999875  35699999999998888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.+++.++.++.+ +++++.++||++.|++........... . ....+.+++.+++|+++.+.++++.....++|+++
T Consensus       163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~  240 (249)
T PRK12825        163 LVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREA-K-DAETPLGRSGTPEDIARAVAFLCSDASDYITGQVI  240 (249)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHh-h-hccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEE
Confidence            99999999999877 999999999999999875543221111 1 11346677889999999999999888778999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      +++||...
T Consensus       241 ~i~~g~~~  248 (249)
T PRK12825        241 EVTGGVDV  248 (249)
T ss_pred             EeCCCEee
Confidence            99999764

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-35  Score=245.24  Aligned_cols=231  Identities=24%  Similarity=0.320  Sum_probs=193.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.++.+.+..   +.++.++++|+++.++++++++++.+.++++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999999987766554432   45688889999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++|||||... ..++.+.+.++|++++++|+.+++.+++.++|.|+  +.+++|++||..+..+.+....|+.+|++++.
T Consensus        80 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~  158 (275)
T PRK08263         80 IVVNNAGYGL-FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEG  158 (275)
T ss_pred             EEEECCCCcc-ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHH
Confidence            9999999875 56778889999999999999999999999999886  35699999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-------ChhHHHHHHhhcccCCC-CCHHHHHHHHHHhcCCCCCCc
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-------NDGVRQTIEQNTLLNRL-GTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +++.++.++.+ |++++.++||+++|++......       ............+.+++ ++|+|+++.++++++...  .
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~--~  236 (275)
T PRK08263        159 MSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAEN--P  236 (275)
T ss_pred             HHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCCC--C
Confidence            99999999987 9999999999999998742211       12222333334455666 899999999999997653  2


Q ss_pred             cccEEEeC
Q 025273          241 TGETLVVA  248 (255)
Q Consensus       241 ~G~~i~~d  248 (255)
                      +++.+...
T Consensus       237 ~~~~~~~~  244 (275)
T PRK08263        237 PLRLFLGS  244 (275)
T ss_pred             CeEEEeCc
Confidence            45554433

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=244.84  Aligned_cols=223  Identities=23%  Similarity=0.284  Sum_probs=192.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||+||||++++++|+++|++|++++|+.+.++...+++...+.++.+++||++++++++++++.+.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999998888888887776778999999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l  170 (255)
                      +|||+|... ...+.+.+.+++++++++|+.+++.+.+.++|.|+  +.++||++||..+..+.+....|+++|++++++
T Consensus        81 lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (270)
T PRK05650         81 IVNNAGVAS-GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL  159 (270)
T ss_pred             EEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence            999999865 46678889999999999999999999999999986  347999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          171 TKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       171 ~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      +++++.|+.+ +|+++.|+||+++|++........................+++|+|+.++..++..
T Consensus       160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence            9999999987 99999999999999987655433222111111112234569999999999888653

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=245.58  Aligned_cols=212  Identities=29%  Similarity=0.378  Sum_probs=186.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++++++|||||+||||++++++|+++|++|++++|+.+.++...+++.    ++.+++||+++.++++++++++.+.+++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLGP   78 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999999887776655542    5778899999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|++|||||... ..++.+.+.+++++++++|+.+++.+.+.++|.|+  +.++||++||..+..+.+....|+++|+++
T Consensus        79 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  157 (273)
T PRK07825         79 IDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAV  157 (273)
T ss_pred             CCEEEECCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHH
Confidence            999999999875 56778889999999999999999999999999986  356999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +.|+++++.|+.+ ||+++.|+||+++|++.......           ......+|+|+++.+..+++...
T Consensus       158 ~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        158 VGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGA-----------KGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccc-----------cCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999987 99999999999999886433111           11235799999999998887654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=3.7e-35  Score=239.95  Aligned_cols=241  Identities=31%  Similarity=0.462  Sum_probs=204.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+++...+.++.++++|+++.++++++++++.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899999999999999999999999999999998887777777765566899999999999999999999999888999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++||++|... .....+.+.+++++++++|+.+++.+++.+++.|+  +.+++|++||..+..+.+....|+.+|++++.
T Consensus        81 ~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~  159 (255)
T TIGR01963        81 ILVNNAGIQH-VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIG  159 (255)
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence            9999999865 35556778889999999999999999999999885  34689999999888888889999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC---------hh-HHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------DG-VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      +++.++.++.+ +++++.++||++.|++.......         .. .........+.+.+.+++|+++.+++++++...
T Consensus       160 ~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~  239 (255)
T TIGR01963       160 LTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAA  239 (255)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcccc
Confidence            99999999877 99999999999999875322110         00 111122233455688999999999999987666


Q ss_pred             CccccEEEeCCCccc
Q 025273          239 YITGETLVVAGGMPS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      .++|+.+++|||+..
T Consensus       240 ~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       240 GITGQAIVLDGGWTA  254 (255)
T ss_pred             CccceEEEEcCcccc
Confidence            789999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=8.8e-36  Score=251.07  Aligned_cols=234  Identities=21%  Similarity=0.236  Sum_probs=185.8

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++.    ++.++++|+++.++++++++++.+.+
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            45789999999999999999999999999999999999887776665553    37788999999999999999999988


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCcc------------CC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGY------------QP  153 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~------------~~  153 (255)
                      +++|++|||||....   ....+.++|+..+++|+.+++.+++.++|.|++  .++||++||..+.            .+
T Consensus        98 ~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~  174 (315)
T PRK06196         98 RRIDILINNAGVMAC---PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG  174 (315)
T ss_pred             CCCCEEEECCCCCCC---CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence            999999999997542   234567789999999999999999999999863  4799999997653            13


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHH-HHHHh-hcccC-CCCCHHHHHHHH
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVR-QTIEQ-NTLLN-RLGTTRDMAAAA  229 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~-~~~~~-~~~~~-~~~~~~d~a~~~  229 (255)
                      .+++..|+.||++++.+++.++.++.+ +|++++|+||+++|++........... .+... ..+.. ++.+|+|++..+
T Consensus       175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  254 (315)
T PRK06196        175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQ  254 (315)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHH
Confidence            345678999999999999999999987 999999999999999876543221111 11111 11222 467899999999


Q ss_pred             HHhcCCCCCCccccEEEeC
Q 025273          230 AFLASDDASYITGETLVVA  248 (255)
Q Consensus       230 ~~l~s~~~~~~~G~~i~~d  248 (255)
                      +|+++......+|..+..|
T Consensus       255 ~~l~~~~~~~~~~g~~~~~  273 (315)
T PRK06196        255 VWAATSPQLAGMGGLYCED  273 (315)
T ss_pred             HHHhcCCccCCCCCeEeCC
Confidence            9999765443344444444

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.2e-35  Score=269.46  Aligned_cols=228  Identities=25%  Similarity=0.327  Sum_probs=195.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ..+++++|||||+||||++++++|+++|++|++++|+.+.++.+.+++...+.++.+++||+++.++++++++++.+.+|
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            35679999999999999999999999999999999999888888888877677899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++|++|||||+.. ..++.+.+.+++++++++|+.|++++++.++|.|.+   +++||++||.+++.+.++...|++||+
T Consensus       392 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  470 (582)
T PRK05855        392 VPDIVVNNAGIGM-AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKA  470 (582)
T ss_pred             CCcEEEECCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHH
Confidence            9999999999865 567788899999999999999999999999999863   479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC----hh--HHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----DG--VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      |++.|+++++.|+.+ ||+|++|+||+++|++.......    +.  ............+..+|+++++.+++.++...
T Consensus       471 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        471 AVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcCC
Confidence            999999999999988 99999999999999987654211    00  00011111222344689999999999987653

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=242.68  Aligned_cols=233  Identities=18%  Similarity=0.237  Sum_probs=192.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC--
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK--   89 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~--   89 (255)
                      |++|||||+||||++++++|+++|++|++++|+.. .++.+.   ...+.++.++++|+++.++++.+++++.+.++.  
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA---EQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH---hccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            68999999999999999999999999999999863 332222   222567889999999999999999998877653  


Q ss_pred             C--CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhH
Q 025273           90 I--DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        90 ~--d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +  +++|||+|......++.+.+.++|.+.+++|+.+++.+.+.+++.+++   .++||++||..+..+.++...|+++|
T Consensus        79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (251)
T PRK06924         79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK  158 (251)
T ss_pred             CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence            2  279999998765667888999999999999999999999999998863   36899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC--C-CeeEEEEeCCcccCCccccccC--Ch--hHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          165 TALLGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITS--ND--GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       165 ~a~~~l~~~la~e~~--~-~v~v~~v~pg~v~t~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +|++.|++.++.|+.  + +|++++|.||+++|++......  ..  ..........+.+++.+|+|+++.+++++++. 
T Consensus       159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-  237 (251)
T PRK06924        159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE-  237 (251)
T ss_pred             HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-
Confidence            999999999999974  3 8999999999999998654211  11  11122333446678899999999999999874 


Q ss_pred             CCccccEEEeCC
Q 025273          238 SYITGETLVVAG  249 (255)
Q Consensus       238 ~~~~G~~i~~dg  249 (255)
                      .+++|+.+.+|+
T Consensus       238 ~~~~G~~~~v~~  249 (251)
T PRK06924        238 DFPNGEVIDIDE  249 (251)
T ss_pred             cCCCCCEeehhh
Confidence            778999998875

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=9e-35  Score=237.28  Aligned_cols=240  Identities=40%  Similarity=0.604  Sum_probs=198.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh--HHHHHHHHHhcC-CeEEEEEecCCC-HHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN--VDEAVVKLKARG-IEVIGVVCHVSN-GQQRKNLINQTIE   85 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~Dv~~-~~~v~~~~~~~~~   85 (255)
                      +++|++|||||++|||+++++.|+++|++|+++.|+.+.  .+...+...... ..+.+.++|+++ .++++.+++++.+
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999999998888888664  333333333112 378888999998 9999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCC-ChhhHhhH
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS-MAMYGVTK  164 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sK  164 (255)
                      .+|++|++|||||......++.+.+.++|++.+++|+.+++.+.+.+.|.+++. +||++||..+. +.++ +..|++||
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~~-~~~~~~~~Y~~sK  160 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAGL-GGPPGQAAYAASK  160 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchhc-CCCCCcchHHHHH
Confidence            999999999999987632478889999999999999999999999888888755 99999999998 7777 49999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhH-HHHHHhhcccCCCCCHHHHHHHHHHhcCCC-CCCcc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV-RQTIEQNTLLNRLGTTRDMAAAAAFLASDD-ASYIT  241 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~-~~~~~  241 (255)
                      +|+++|+++++.|+.+ ||++++|+||+++|++.......... ........+..++..|++++..+.++.+.. ..+++
T Consensus       161 ~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (251)
T COG1028         161 AALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAASYIT  240 (251)
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcchhcccc
Confidence            9999999999999887 99999999999999988755433200 111111114557888999999999888774 66789


Q ss_pred             ccEEEeCCCc
Q 025273          242 GETLVVAGGM  251 (255)
Q Consensus       242 G~~i~~dgG~  251 (255)
                      |+.+.+|||.
T Consensus       241 g~~~~~~~~~  250 (251)
T COG1028         241 GQTLPVDGGL  250 (251)
T ss_pred             CCEEEeCCCC
Confidence            9999999986

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-35  Score=241.25  Aligned_cols=222  Identities=21%  Similarity=0.277  Sum_probs=186.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .+|++|||||+||||++++++|+++|++|++++|+.+.++.+.+.   .+.++.++++|+++.+++.++++.+.+.++++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            368999999999999999999999999999999998766554332   24578889999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      |++|||||... ..+..+.+.++|++.+++|+.+++++.++++|+|+  +.++||++||.++..+.++...|+++|++++
T Consensus        80 d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~  158 (277)
T PRK06180         80 DVLVNNAGYGH-EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE  158 (277)
T ss_pred             CEEEECCCccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence            99999999865 56778889999999999999999999999999886  3579999999999988899999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-----ChhHHH------HHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-----NDGVRQ------TIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      .++++++.++.+ +++++.|+||+++|++......     .+....      ......+..++.+|+|+++.+.++++..
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            999999999987 9999999999999986432211     111110      1111223455779999999999998765

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=4.7e-35  Score=243.59  Aligned_cols=227  Identities=24%  Similarity=0.370  Sum_probs=189.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+.++...+++...+.++.++++|+++.++++++++.+.+.++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999999998888877777766667899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--C------CeEEEEcccCccCCCCCChhh
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--G------SSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~------~~iv~iss~~~~~~~~~~~~y  160 (255)
                      ++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+  .      ++||++||..+..+.+....|
T Consensus        83 ~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  161 (287)
T PRK06194         83 AVHLLFNNAGVGA-GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIY  161 (287)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcch
Confidence            9999999999876 466778899999999999999999999999998852  1      689999999999888899999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC---CeeEEEEeCCcccCCccccccCCh-hH------------HHHHHhhcccCCCCCHHH
Q 025273          161 GVTKTALLGLTKALAAEMAP---DTRVNCVAPGFVPTHFAEYITSND-GV------------RQTIEQNTLLNRLGTTRD  224 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~---~v~v~~v~pg~v~t~~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~d  224 (255)
                      +++|++++.|+++++.++..   +||++.++||+++|++.......+ ..            ..............+++|
T Consensus       162 ~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d  241 (287)
T PRK06194        162 NVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEE  241 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHH
Confidence            99999999999999999863   699999999999999875432111 00            000011111112369999


Q ss_pred             HHHHHHHhcCCC
Q 025273          225 MAAAAAFLASDD  236 (255)
Q Consensus       225 ~a~~~~~l~s~~  236 (255)
                      +|+.+..++...
T Consensus       242 va~~i~~~~~~~  253 (287)
T PRK06194        242 VAQLVFDAIRAG  253 (287)
T ss_pred             HHHHHHHHHHcC
Confidence            999999877543

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-35  Score=243.22  Aligned_cols=217  Identities=18%  Similarity=0.281  Sum_probs=184.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++.+.+.+
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            44678999999999999999999999999999999999988888888776666788899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCC--CHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccC-CCCCChhhHh
Q 025273           88 GKIDVVVSNAAANPSVDSILQT--KESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQ-PQSSMAMYGV  162 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~-~~~~~~~y~~  162 (255)
                      +++|++|||||.... .++.+.  +.+++++.+++|+.|++.++++++|.|+  ..++||++||.++.. +.+....|++
T Consensus       116 g~id~li~~AG~~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~a  194 (293)
T PRK05866        116 GGVDILINNAGRSIR-RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNA  194 (293)
T ss_pred             CCCCEEEECCCCCCC-cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHH
Confidence            999999999998653 344432  4578999999999999999999999986  357999999976654 3667789999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      +|+|+++|+++++.|+.+ +|++++++||+++|++........          . ....+|+++|+.++..+...
T Consensus       195 sKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~~----------~-~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        195 SKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAYD----------G-LPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccccc----------C-CCCCCHHHHHHHHHHHHhcC
Confidence            999999999999999987 999999999999999874321110          1 12358999999988887543

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-35  Score=246.54  Aligned_cols=238  Identities=21%  Similarity=0.236  Sum_probs=187.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++++...+++...  +.++.+++||+++.++++++++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999998888887777554  34788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-CCeEEEEcccCccCC-----------
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQP-----------  153 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~-----------  153 (255)
                      .++++|+||||||....  +..+.+.++++.++++|+.|++.+++.++|.|++ .++||++||.++..+           
T Consensus        90 ~~~~iD~li~nAG~~~~--~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~  167 (313)
T PRK05854         90 EGRPIHLLINNAGVMTP--PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWER  167 (313)
T ss_pred             hCCCccEEEECCccccC--CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccc
Confidence            99999999999998642  3345678899999999999999999999999863 479999999876532           


Q ss_pred             -CCCChhhHhhHHHHHHHHHHHHHHh--CC-CeeEEEEeCCcccCCccccccC----ChhHHHHHHh-hcccC-CCCCHH
Q 025273          154 -QSSMAMYGVTKTALLGLTKALAAEM--AP-DTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQ-NTLLN-RLGTTR  223 (255)
Q Consensus       154 -~~~~~~y~~sK~a~~~l~~~la~e~--~~-~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~-~~~~~-~~~~~~  223 (255)
                       ++++..|+.||+|+..|++.|++++  .. +|+||+++||+++|++......    ...+...... ....+ .+.+++
T Consensus       168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (313)
T PRK05854        168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVE  247 (313)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHH
Confidence             3456789999999999999999864  33 8999999999999998643211    0111111111 11111 134778


Q ss_pred             HHHHHHHHhcCCCCCCccccEEEeC
Q 025273          224 DMAAAAAFLASDDASYITGETLVVA  248 (255)
Q Consensus       224 d~a~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      +-+...++++.++.. .+|..+..+
T Consensus       248 ~ga~~~l~~a~~~~~-~~g~~~~~~  271 (313)
T PRK05854        248 SAILPALYAATSPDA-EGGAFYGPR  271 (313)
T ss_pred             HHHHHhhheeeCCCC-CCCcEECCC
Confidence            888888887765432 246665443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.1e-34  Score=236.45  Aligned_cols=228  Identities=21%  Similarity=0.282  Sum_probs=188.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++++||||+||||.+++++|+++|++|++++|+.+.++.+.+.+   +.++.++++|+++.++++++++++.+.++++|+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999987766655443   347888999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l  170 (255)
                      +||++|......++.+.+.++|++++++|+.+++.+++.++++|+  +.+++|++||..+..+.++...|+.+|++++.|
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~  157 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF  157 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHH
Confidence            999999764345677889999999999999999999999999985  347999999999888888899999999999999


Q ss_pred             HHHHHHHhCC-CeeEEEEeCCcccCCccccc--cCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          171 TKALAAEMAP-DTRVNCVAPGFVPTHFAEYI--TSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       171 ~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      ++.++.++.+ +|+++.|.||++.|+.....  .......   ..........+|+|+|+.++++++....+..++...
T Consensus       158 ~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~  233 (248)
T PRK10538        158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA---EKTYQNTVALTPEDVSEAVWWVATLPAHVNINTLEM  233 (248)
T ss_pred             HHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHH---HhhccccCCCCHHHHHHHHHHHhcCCCcccchhhcc
Confidence            9999999987 99999999999985543221  1111111   111112245699999999999998777766666543

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.9e-37  Score=225.30  Aligned_cols=236  Identities=24%  Similarity=0.392  Sum_probs=205.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .+|-+.|||||.||+|++.++.|+++|+.|++.+-.++..+...+++   ++++.|.+.|++++++++..++..+.+||+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kfgr   83 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFGR   83 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence            46889999999999999999999999999999999988888887776   679999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCC-----CccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--------CCCeEEEEcccCccCCCCC
Q 025273           90 IDVVVSNAAANPSVD-----SILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--------KGSSVVLISSIAGYQPQSS  156 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~-----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--------~~~~iv~iss~~~~~~~~~  156 (255)
                      +|.+|||||+....+     ....-+.|+|++++++|+.|+|++++....+|-        .+|.||+..|.+++.+..+
T Consensus        84 ld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g  163 (260)
T KOG1199|consen   84 LDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG  163 (260)
T ss_pred             eeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc
Confidence            999999999853222     223457899999999999999999998888873        3568999999999999999


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhccc-CCCCCHHHHHHHHHHhcC
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~s  234 (255)
                      +.+|++||.++.+|+--+++++.+ |||++.|.||.++||+....  ++.+...+....|. .|.+.|.|.+..+-.+. 
T Consensus       164 qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl--pekv~~fla~~ipfpsrlg~p~eyahlvqaii-  240 (260)
T KOG1199|consen  164 QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL--PEKVKSFLAQLIPFPSRLGHPHEYAHLVQAII-  240 (260)
T ss_pred             hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh--hHHHHHHHHHhCCCchhcCChHHHHHHHHHHH-
Confidence            999999999999999999999988 99999999999999998755  33444445555553 47889999999888887 


Q ss_pred             CCCCCccccEEEeCCCcc
Q 025273          235 DDASYITGETLVVAGGMP  252 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~  252 (255)
                       +..++||++|.+||-.-
T Consensus       241 -enp~lngevir~dgalr  257 (260)
T KOG1199|consen  241 -ENPYLNGEVIRFDGALR  257 (260)
T ss_pred             -hCcccCCeEEEecceec
Confidence             45679999999999753

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-35  Score=239.79  Aligned_cols=213  Identities=21%  Similarity=0.267  Sum_probs=182.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+ ++.++++|+++.++++++++++.+.++.+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            4789999999999999999999999999999999888777666654333 789999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++|||+|.........+.+.+++++++++|+.|++.+++.++|.|+  +.++||++||..+..+.+....|+++|++++.
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            9999999865323333377899999999999999999999999885  45799999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      ++++++.|+.+ +|++++++||+++|++.....            .......+|+++++.++..+....
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------------YPMPFLMDADRFAARAARAIARGR  217 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------------CCCCCccCHHHHHHHHHHHHhCCC
Confidence            99999999987 999999999999998754211            011224689999999888886543

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-34  Score=234.61  Aligned_cols=220  Identities=25%  Similarity=0.372  Sum_probs=191.6

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      |.++++|+++||||+|+||++++++|+++|++|++++|+.++++...+++...+.++.++++|+++.++++++++++.+.
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35567899999999999999999999999999999999988877777777666678999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++|||+|... ...+.+.+.++|++.+++|+.+++.+.+.+.+.+.  ..+++|++||..+..+.++...|+.+|
T Consensus        82 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  160 (239)
T PRK07666         82 LGSIDILINNAGISK-FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASK  160 (239)
T ss_pred             cCCccEEEEcCcccc-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHH
Confidence            999999999999865 45677788999999999999999999999999875  357899999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ++++.+++.++.|+.+ +++++.|+||+++|++........         .....+.+++|+++.+..+++..
T Consensus       161 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~---------~~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        161 FGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTD---------GNPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccccc---------cCCCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999987 999999999999998764331110         01234678999999999988765

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=6.3e-35  Score=245.69  Aligned_cols=210  Identities=22%  Similarity=0.324  Sum_probs=173.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .|++++||||++|||++++++|+++|++|++++|+.+.++.+.+++...  +.++..+.+|+++  ++.+.++++.+.++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            5899999999999999999999999999999999999999888887654  3478889999985  23344445555554


Q ss_pred             --CCCEEEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccC-C-CCCChhhH
Q 025273           89 --KIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQ-P-QSSMAMYG  161 (255)
Q Consensus        89 --~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~-~-~~~~~~y~  161 (255)
                        ++|++|||||+... ...+.+.+.+++++++++|+.|++.+++.++|.|.  +.++||++||..+.. + .+....|+
T Consensus       130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~  209 (320)
T PLN02780        130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYA  209 (320)
T ss_pred             CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHH
Confidence              46699999998643 24677889999999999999999999999999985  458999999998864 3 57789999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      +||++++.|+++++.|+.+ ||+|++|+||+++|++....  ..          .. ...+|+++|+.++..+..
T Consensus       210 aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~--~~----------~~-~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        210 ATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR--RS----------SF-LVPSSDGYARAALRWVGY  271 (320)
T ss_pred             HHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc--CC----------CC-CCCCHHHHHHHHHHHhCC
Confidence            9999999999999999988 99999999999999986411  00          00 134899999988887743

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=3.4e-34  Score=231.94  Aligned_cols=235  Identities=37%  Similarity=0.603  Sum_probs=201.7

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      +||||++++||++++++|+++|++|++++|+. +..+...+.+...+.++.++++|+++.++++++++.+.+.++++|.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999999875 44555556666566788999999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHHHH
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~  171 (255)
                      ||++|... ...+.+.+.+++++.+++|+.+++.+.+.+.+++.  +.++++++||..+..+.+....|+.+|++++.++
T Consensus        81 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~  159 (239)
T TIGR01830        81 VNNAGITR-DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT  159 (239)
T ss_pred             EECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHH
Confidence            99999865 35566778899999999999999999999998874  3569999999988888888999999999999999


Q ss_pred             HHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          172 KALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       172 ~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      +.++.++.. +++++.++||+++|++....  ............+..++.+++|+++.+.+++++...+.+|+.+++|+|
T Consensus       160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       160 KSLAKELASRNITVNAVAPGFIDTDMTDKL--SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHHhhcCeEEEEEEECCCCChhhhhc--ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            999999877 99999999999999876443  223333344455667788999999999999988777899999999999


Q ss_pred             cc
Q 025273          251 MP  252 (255)
Q Consensus       251 ~~  252 (255)
                      +.
T Consensus       238 ~~  239 (239)
T TIGR01830       238 MY  239 (239)
T ss_pred             cC
Confidence            73

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-35  Score=240.98  Aligned_cols=219  Identities=19%  Similarity=0.224  Sum_probs=181.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-GKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~~   90 (255)
                      +|++|||||+||||++++++|+++|++|++++|+.+.++.+.+    .  .+.++++|+++.++++++++++.+.+ +++
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E--GLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C--CceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            6899999999999999999999999999999999876654432    2  46788999999999999999997776 689


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      |++|||||+.. ...+.+.+.+++++.+++|+.|++.+++.++|.|+  +.++||++||..+..+.+....|+++|++++
T Consensus        78 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  156 (277)
T PRK05993         78 DALFNNGAYGQ-PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIE  156 (277)
T ss_pred             cEEEECCCcCC-CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHH
Confidence            99999999865 46678889999999999999999999999999986  3579999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC----------h---hH---HHHHHh-hcccCCCCCHHHHHHHHH
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----------D---GV---RQTIEQ-NTLLNRLGTTRDMAAAAA  230 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~----------~---~~---~~~~~~-~~~~~~~~~~~d~a~~~~  230 (255)
                      .|+++++.|+.+ ||+++.|+||+++|++.......          .   ..   ...... ........+|+++++.++
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  236 (277)
T PRK05993        157 GLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLL  236 (277)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHH
Confidence            999999999988 99999999999999986543210          0   00   000101 111222468999999999


Q ss_pred             HhcCCCC
Q 025273          231 FLASDDA  237 (255)
Q Consensus       231 ~l~s~~~  237 (255)
                      ..+....
T Consensus       237 ~a~~~~~  243 (277)
T PRK05993        237 HALTAPR  243 (277)
T ss_pred             HHHcCCC
Confidence            8886653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.6e-34  Score=244.12  Aligned_cols=239  Identities=14%  Similarity=0.093  Sum_probs=185.7

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++++|+++.++++++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            34578999999999999999999999999999999999988887777775445678899999999999999999987777


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC----CeEEEEcccCccC-----------
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG----SSVVLISSIAGYQ-----------  152 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~iv~iss~~~~~-----------  152 (255)
                      +++|+||||||+........+.+.+++++++++|+.|++.+++.++|.|++.    ++||++||.....           
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~  161 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPA  161 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCC
Confidence            8899999999986432334467889999999999999999999999998632    5999999965421           


Q ss_pred             ------------------------CCCCChhhHhhHHHHHHHHHHHHHHhC-C-CeeEEEEeCCcc-cCCccccccCChh
Q 025273          153 ------------------------PQSSMAMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFV-PTHFAEYITSNDG  205 (255)
Q Consensus       153 ------------------------~~~~~~~y~~sK~a~~~l~~~la~e~~-~-~v~v~~v~pg~v-~t~~~~~~~~~~~  205 (255)
                                              ++.+...|+.||.+.+.+++.+++++. . +|++++++||++ .|++.+.......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~  241 (322)
T PRK07453        162 PADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLFQ  241 (322)
T ss_pred             ccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHHH
Confidence                                    123456899999999999999999984 3 899999999999 5887654322111


Q ss_pred             HHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          206 VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      ...............++++.++.+++++.+.....+|..+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        242 KLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence            11111111122334577788877777776654446787665

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-35  Score=244.11  Aligned_cols=237  Identities=22%  Similarity=0.221  Sum_probs=185.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..+...+++...  +.++.++++|+++.++++++++++.+
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            5678999999999999999999999999999999999988877766666543  45788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccC-----------
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQ-----------  152 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~-----------  152 (255)
                      .++++|++|||||....   ....+.++++..+++|+.|++.+++.+++.|++  .++||++||..+..           
T Consensus        92 ~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~  168 (306)
T PRK06197         92 AYPRIDLLINNAGVMYT---PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQW  168 (306)
T ss_pred             hCCCCCEEEECCccccC---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCc
Confidence            99999999999997542   234667789999999999999999999999863  57999999986542           


Q ss_pred             --CCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEE--EeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHH
Q 025273          153 --PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC--VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAA  227 (255)
Q Consensus       153 --~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~--v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~  227 (255)
                        +.++...|+.||++++.|++.+++++.+ ++++++  ++||+++|++.+.....  .........+. ...++++-+.
T Consensus       169 ~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~--~~~~~~~~~~~-~~~~~~~g~~  245 (306)
T PRK06197        169 ERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA--LRPVATVLAPL-LAQSPEMGAL  245 (306)
T ss_pred             ccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH--HHHHHHHHHhh-hcCCHHHHHH
Confidence              2345678999999999999999999966 666654  57999999987654321  11111111111 1235666666


Q ss_pred             HHHHhcCCCCCCccccEEEeCCCc
Q 025273          228 AAAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ..++++.. ....+|..+..||+.
T Consensus       246 ~~~~~~~~-~~~~~g~~~~~~~~~  268 (306)
T PRK06197        246 PTLRAATD-PAVRGGQYYGPDGFG  268 (306)
T ss_pred             HHHHHhcC-CCcCCCeEEccCccc
Confidence            66666644 345689888887754

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=1.2e-34  Score=234.39  Aligned_cols=218  Identities=20%  Similarity=0.207  Sum_probs=179.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      |+++||||++|||++++++|+++|  +.|++.+|+....        ....++.+++||+++.++++++.    +.++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~Dls~~~~~~~~~----~~~~~i   68 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--------FQHDNVQWHALDVTDEAEIKQLS----EQFTQL   68 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--------cccCceEEEEecCCCHHHHHHHH----HhcCCC
Confidence            579999999999999999999985  5677677765321        12357888999999999988753    446799


Q ss_pred             CEEEEcCCCCCC-----CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCcc---CCCCCChhh
Q 025273           91 DVVVSNAAANPS-----VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGY---QPQSSMAMY  160 (255)
Q Consensus        91 d~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~---~~~~~~~~y  160 (255)
                      |++|||||....     ...+++.+.+.|++.+++|+.+++.+++.++|.|++  .++++++||..+.   .+.+++..|
T Consensus        69 d~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y  148 (235)
T PRK09009         69 DWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSY  148 (235)
T ss_pred             CEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchh
Confidence            999999998642     245677888999999999999999999999999863  4689999986553   234567799


Q ss_pred             HhhHHHHHHHHHHHHHHhCC---CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP---DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~---~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +++|++++.|+++|+.|+.+   +|++++|+||+++|++.....          ...+.+++.+|+|+++.+++++++..
T Consensus       149 ~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~a~~~~~l~~~~~  218 (235)
T PRK09009        149 RASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ----------QNVPKGKLFTPEYVAQCLLGIIANAT  218 (235)
T ss_pred             hhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh----------hccccCCCCCHHHHHHHHHHHHHcCC
Confidence            99999999999999999864   899999999999999865321          12345667899999999999999988


Q ss_pred             CCccccEEEeCCCcc
Q 025273          238 SYITGETLVVAGGMP  252 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~  252 (255)
                      .+.+|+.+.+|||..
T Consensus       219 ~~~~g~~~~~~g~~~  233 (235)
T PRK09009        219 PAQSGSFLAYDGETL  233 (235)
T ss_pred             hhhCCcEEeeCCcCC
Confidence            889999999999863

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-34  Score=234.53  Aligned_cols=227  Identities=21%  Similarity=0.307  Sum_probs=190.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++..|++|||||+|+||++++++|+++|++|++++|+.+.++...+++...+.++.++++|+++.++++++++++.+.++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35678999999999999999999999999999999998777777666666667889999999999999999999999899


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||... ...+.+.+.+.+++.+++|+.+++++++.+++.+.  ..++||++||..++.+.+....|+.+|++
T Consensus        87 ~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  165 (274)
T PRK07775         87 EIEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAG  165 (274)
T ss_pred             CCCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHH
Confidence            9999999999765 45667788899999999999999999999999875  35689999999988888888899999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCCh--hHHHHHH--hhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--GVRQTIE--QNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ++.++++++.++.+ +|++++++||+++|++........  .......  .....+++..++|++++++++++..
T Consensus       166 ~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        166 LEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence            99999999999877 999999999999998654322210  0011111  1122356889999999999999764

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-34  Score=235.96  Aligned_cols=217  Identities=24%  Similarity=0.344  Sum_probs=187.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+.++...+++ ..+.++.++++|+++.++++.+++.+.+ +++
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~   80 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-MGG   80 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-cCC
Confidence            46899999999999999999999999999999999988888777776 4466889999999999999999998876 789


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|++|||||... ..++.+.+.+++++.+++|+.|++.+++.++++|++  .+++|++||..+..+.+....|+.+|+++
T Consensus        81 id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  159 (263)
T PRK09072         81 INVLINNAGVNH-FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFAL  159 (263)
T ss_pred             CCEEEECCCCCC-ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHH
Confidence            999999999865 466778899999999999999999999999999863  37999999999888888899999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ..++++++.++.+ +|+++.++||+++|++.......      . ......+..+|+|+++.++++++..
T Consensus       160 ~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~------~-~~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        160 RGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA------L-NRALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc------c-cccccCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999977 99999999999999875432110      0 0111234678999999999999765

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=6.5e-35  Score=234.26  Aligned_cols=188  Identities=20%  Similarity=0.278  Sum_probs=175.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++.+|.|+|||+.+|+|+.+|++|.++|+.|++.+.+++..+.+..+..  .++...++.|||++++++++.+.+++.++
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            4678999999999999999999999999999999999888888777664  57899999999999999999999999874


Q ss_pred             --CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 --KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 --~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                        .+-.||||||+....++.+..+.+++++.+++|++|++.++++++|+++ ..||||++||..|..+.+...+|++||+
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y~~SK~  183 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPYCVSKF  183 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccchhhHH
Confidence              5888999999887788999999999999999999999999999999997 5799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccc
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAE  198 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~  198 (255)
                      |++.|+.++++|+.+ ||+|..|.||++.|++..
T Consensus       184 aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  184 AVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            999999999999999 999999999999999875

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=238.91  Aligned_cols=237  Identities=22%  Similarity=0.288  Sum_probs=194.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++.+++++ ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            4789999999999999999999999999999999988777776655443  3578999999999999999 999988899


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||+|... .....+.+.+++++.+++|+.+++.+++.+++.|+  +.++||++||..+..+.++...|+.+|++
T Consensus        81 ~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~  159 (280)
T PRK06914         81 RIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYA  159 (280)
T ss_pred             CeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHH
Confidence            9999999999765 45667788999999999999999999999999885  45799999999888888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC------C--h---hHHHHHHh--hcccCCCCCHHHHHHHHHHh
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS------N--D---GVRQTIEQ--NTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~------~--~---~~~~~~~~--~~~~~~~~~~~d~a~~~~~l  232 (255)
                      ++.|+++++.++.+ +|+++.++||+++|++......      .  .   ........  ..+..++.+|+|+++.++++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  239 (280)
T PRK06914        160 LEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEI  239 (280)
T ss_pred             HHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHH
Confidence            99999999999887 9999999999999997643211      0  0   01111111  12345678999999999999


Q ss_pred             cCCCCCCccccEEEeCCCcc
Q 025273          233 ASDDASYITGETLVVAGGMP  252 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++....   +..+++.+|..
T Consensus       240 ~~~~~~---~~~~~~~~~~~  256 (280)
T PRK06914        240 AESKRP---KLRYPIGKGVK  256 (280)
T ss_pred             HcCCCC---CcccccCCchH
Confidence            977643   24566665543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-33  Score=228.62  Aligned_cols=233  Identities=25%  Similarity=0.393  Sum_probs=194.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|+++||||+|+||.++++.|+++|++|++++|+.+.++.+.+++... .++.++++|+++.++++++++++...++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVLN   80 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            367899999999999999999999999999999999988777665555443 3688899999999999999999988889


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-CCCCCChhhHhhHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-QPQSSMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK~a~  167 (255)
                      ++|.+|+++|... ..++.  +.+++++.+++|+.+++.+.+.++|.+++++++|++||..+. .+.+....|+.+|+++
T Consensus        81 ~id~ii~~ag~~~-~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~  157 (238)
T PRK05786         81 AIDGLVVTVGGYV-EDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGL  157 (238)
T ss_pred             CCCEEEEcCCCcC-CCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHH
Confidence            9999999998654 22332  338899999999999999999999999888899999998764 4567788899999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.+++.++.++.+ +++++.|+||+++|++...    ..... .  ........+++|+++.+.+++++....++|+.+.
T Consensus       158 ~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~----~~~~~-~--~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~  230 (238)
T PRK05786        158 AKAVEILASELLGRGIRVNGIAPTTISGDFEPE----RNWKK-L--RKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIP  230 (238)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCccCCCCCch----hhhhh-h--ccccCCCCCHHHHHHHHHHHhcccccCccCCEEE
Confidence            9999999999977 9999999999999986421    11111 0  0112235789999999999998877788999999


Q ss_pred             eCCCcc
Q 025273          247 VAGGMP  252 (255)
Q Consensus       247 ~dgG~~  252 (255)
                      +|||..
T Consensus       231 ~~~~~~  236 (238)
T PRK05786        231 VDGGAR  236 (238)
T ss_pred             ECCccc
Confidence            999875

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-34  Score=233.73  Aligned_cols=211  Identities=21%  Similarity=0.244  Sum_probs=177.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchh-HHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKN-VDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~-~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+|++|||||++|||++++++|+++| ++|++++|+.+. ++.+.+++...+ .++.++++|+++.++++++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            47899999999999999999999995 999999999886 777777776654 3789999999999999999998876 5


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +++|++|||+|..... .....+.++..+++++|+.+++.+++.++|.|+  +.++||++||..+..+.++...|++||+
T Consensus        86 g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKa  164 (253)
T PRK07904         86 GDVDVAIVAFGLLGDA-EELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKA  164 (253)
T ss_pred             CCCCEEEEeeecCCch-hhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHH
Confidence            8999999999986422 111224455667899999999999999999986  3579999999988888888889999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ++.+|+++++.|+.+ +|+++.|+||+++|++.......             ....+|+|+|+.++..+...
T Consensus       165 a~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        165 GLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKEA-------------PLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCCC-------------CCCCCHHHHHHHHHHHHHcC
Confidence            999999999999988 99999999999999877533211             12468999999999988654

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-34  Score=225.71  Aligned_cols=197  Identities=22%  Similarity=0.242  Sum_probs=170.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||++|||++++++|+++ ++|++++|+..                 .++||+++++++++++++    ++++|+
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~~~id~   58 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEK----VGKVDA   58 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHh----cCCCCE
Confidence            36999999999999999999999 99999999853                 368999999999988765    478999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~  172 (255)
                      +|||||... ..++.+.+.++|++.+++|+.+++++.+.+.|+|++.++|+++||..+..+.+.+..|+++|+++++|++
T Consensus        59 lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  137 (199)
T PRK07578         59 VVSAAGKVH-FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVK  137 (199)
T ss_pred             EEECCCCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHH
Confidence            999999764 5677888999999999999999999999999999888999999999999888999999999999999999


Q ss_pred             HHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          173 ALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       173 ~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +++.|+ + +|++++|+||+++|++....           ...+.....+|+|+++.+..+++.   ..+|+++.+
T Consensus       138 ~la~e~-~~gi~v~~i~Pg~v~t~~~~~~-----------~~~~~~~~~~~~~~a~~~~~~~~~---~~~g~~~~~  198 (199)
T PRK07578        138 AAALEL-PRGIRINVVSPTVLTESLEKYG-----------PFFPGFEPVPAARVALAYVRSVEG---AQTGEVYKV  198 (199)
T ss_pred             HHHHHc-cCCeEEEEEcCCcccCchhhhh-----------hcCCCCCCCCHHHHHHHHHHHhcc---ceeeEEecc
Confidence            999999 6 99999999999999864211           001223457999999999999864   478998875

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-34  Score=235.86  Aligned_cols=218  Identities=25%  Similarity=0.352  Sum_probs=183.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++++++||||+||||++++++|+++|++|++++|+.+..+.        ...+.++++|++++++++++++++.+.++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            36899999999999999999999999999999998654332        2367789999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      |++|||||+.. ...+.+.+.+++++.+++|+.|++.+++.++|.|+  +.++||++||..+..+.+....|+++|++++
T Consensus        75 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  153 (270)
T PRK06179         75 DVLVNNAGVGL-AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE  153 (270)
T ss_pred             CEEEECCCCCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence            99999999875 46777889999999999999999999999999986  3579999999999988888999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhH-------HHH--HHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV-------RQT--IEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~-------~~~--~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      .++++++.|+.+ +|+++.|+||+++|++..........       ...  .....+..+..+|+++++.++.+++...
T Consensus       154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~  232 (270)
T PRK06179        154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPW  232 (270)
T ss_pred             HHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCC
Confidence            999999999987 99999999999999987644321100       000  0111234556789999999999987653

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=232.16  Aligned_cols=216  Identities=25%  Similarity=0.234  Sum_probs=183.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK-FGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~~d   91 (255)
                      |++|||||+||||++++++|+++|++|++++|+.+.++.+.+.+.  +.++.++++|+++.++++++++.+.+. ++++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            789999999999999999999999999999999887777665543  457899999999999999999988776 68999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++|||||... ...+.+.+.+++++++++|+.+++.+++++.++|+  +.++||++||..+..+.+....|+.||++++.
T Consensus        80 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  158 (260)
T PRK08267         80 VLFNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRG  158 (260)
T ss_pred             EEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHH
Confidence            9999999865 46777888999999999999999999999999886  36899999999998888899999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      ++++++.++.+ +|++++|.||+++|++......  .....  .....+...+|+|+++.++.++..
T Consensus       159 ~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~--~~~~~--~~~~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        159 LTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN--EVDAG--STKRLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHhcccCcEEEEEecCCcCCcccccccc--hhhhh--hHhhccCCCCHHHHHHHHHHHHhC
Confidence            99999999987 9999999999999998754111  11111  111123346899999999999854

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=232.15  Aligned_cols=223  Identities=27%  Similarity=0.413  Sum_probs=189.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ++++|||||+|+||++++++|+++|++|++++|+.+..+...+++...+.++.++.+|+++.++++.+++.+.+.++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999998887777777766677889999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCC-CHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQT-KESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++|||+|... ...+.+. +.+++++.+++|+.+++.+++.+.+.++ ..+++|++||..+..+.++...|+.+|++++.
T Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~  159 (263)
T PRK06181         81 ILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHG  159 (263)
T ss_pred             EEEECCCccc-ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHH
Confidence            9999999765 4566677 8899999999999999999999999875 56799999999998888899999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ++++++.++.+ +++++++.||++.|++........+... ........++.+|+|+++.+.++++..
T Consensus       160 ~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        160 FFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPL-GKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHhhhcCceEEEEecCccccCcchhhcccccccc-ccccccccCCCCHHHHHHHHHHHhhCC
Confidence            99999999987 9999999999999998654432111100 000011236789999999999999754

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.6e-34  Score=216.53  Aligned_cols=182  Identities=24%  Similarity=0.366  Sum_probs=164.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +.|.++|||||++|||++++++|.+.|-+|++++|+++.++..+++.    +.+....||+.|.++++++++++.++++.
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~P~   78 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEYPN   78 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhCCc
Confidence            45899999999999999999999999999999999999888777664    47788999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCc-cCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           90 IDVVVSNAAANPSVDSI-LQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++++|||||+-....-. .+...++.++.+.+|+.+++.+++.++|++.  +.+.||++||..+..|....+.|+++|+|
T Consensus        79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAa  158 (245)
T COG3967          79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAA  158 (245)
T ss_pred             hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHH
Confidence            99999999997532222 3345677889999999999999999999875  46899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCC
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTH  195 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~  195 (255)
                      +..++.+|+..+.. +|+|.-+.|..|+|+
T Consensus       159 iHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         159 IHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            99999999999887 999999999999996

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=8.3e-34  Score=217.20  Aligned_cols=222  Identities=21%  Similarity=0.300  Sum_probs=179.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHc-CCeEE-EEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLE-GASVV-VSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~-G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (255)
                      .|.++||||++|||..++++|.+. |-+++ .++|+.+.+....+.......+++.+++|++..++++++++++.+-.  
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            466999999999999999999975 66644 45666776533333334457899999999999999999999998874  


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-------------CCeEEEEcccCccCC-
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------------GSSVVLISSIAGYQP-  153 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------------~~~iv~iss~~~~~~-  153 (255)
                      ..+|+||||||+........+.+.+.|.+.+++|..|+++++|+++|++++             ++.|||+||..+..+ 
T Consensus        83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~  162 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG  162 (249)
T ss_pred             CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence            479999999999876677777888999999999999999999999999963             237999998776532 


Q ss_pred             --CCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHH
Q 025273          154 --QSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAA  230 (255)
Q Consensus       154 --~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  230 (255)
                        ..++.+|..||+|+++|+|+++.|+.+ +|-|..+|||||.|+|...                 ....++||.+..+.
T Consensus       163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~-----------------~a~ltveeSts~l~  225 (249)
T KOG1611|consen  163 FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK-----------------KAALTVEESTSKLL  225 (249)
T ss_pred             CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC-----------------CcccchhhhHHHHH
Confidence              345789999999999999999999998 9999999999999999861                 12346777666665


Q ss_pred             HhcCCCCCCccccEEEeCCC
Q 025273          231 FLASDDASYITGETLVVAGG  250 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ..+..-...-||..++-|+-
T Consensus       226 ~~i~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  226 ASINKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             HHHHhcCcccCcceEccCCC
Confidence            55544444457888877763

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.8e-34  Score=235.10  Aligned_cols=229  Identities=25%  Similarity=0.317  Sum_probs=186.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++.+++++|||+++|||+++|++|+++|++|++.+|+.+..+..++++...  ..++.+++||+++.++|+++++++.+
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999999999999999998864  56888999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC--CeEEEEcccCccC-----------
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG--SSVVLISSIAGYQ-----------  152 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~iss~~~~~-----------  152 (255)
                      .++++|++|||||+.....   ..+.|.+|..|.+|++|++.+++.++|.|+..  +|||++||.....           
T Consensus       111 ~~~~ldvLInNAGV~~~~~---~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~  187 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPF---SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEK  187 (314)
T ss_pred             cCCCccEEEeCcccccCCc---ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchh
Confidence            9999999999999976332   67778999999999999999999999999843  7999999987511           


Q ss_pred             -C-CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCC-ccccccCChhHHHHHHhhcccCCCCCHHHHHHHH
Q 025273          153 -P-QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH-FAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA  229 (255)
Q Consensus       153 -~-~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  229 (255)
                       . +.....|+.||.+...+++.|++.+..||.+++++||.+.|+ +.+    .......+........+-++++-|...
T Consensus       188 ~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r----~~~~~~~l~~~l~~~~~ks~~~ga~t~  263 (314)
T KOG1208|consen  188 AKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR----VNLLLRLLAKKLSWPLTKSPEQGAATT  263 (314)
T ss_pred             ccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec----chHHHHHHHHHHHHHhccCHHHHhhhe
Confidence             0 233446999999999999999999987999999999999998 444    111222122222222223788888888


Q ss_pred             HHhcCCCC-CCcccc
Q 025273          230 AFLASDDA-SYITGE  243 (255)
Q Consensus       230 ~~l~s~~~-~~~~G~  243 (255)
                      ++++..+. ...+|.
T Consensus       264 ~~~a~~p~~~~~sg~  278 (314)
T KOG1208|consen  264 CYAALSPELEGVSGK  278 (314)
T ss_pred             ehhccCccccCcccc
Confidence            87776552 234444

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-33  Score=226.00  Aligned_cols=211  Identities=20%  Similarity=0.294  Sum_probs=183.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...  +.++.++++|+++.++++++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999998888777666543  568899999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCC-ChhhHhhHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSS-MAMYGVTKTA  166 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~-~~~y~~sK~a  166 (255)
                      +|++|||||+.. ...+.+.+.+.+++.+++|+.+++.+.+.+++.++  +.++||++||..+..+.+. ...|+.+|++
T Consensus        82 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a  160 (248)
T PRK08251         82 LDRVIVNAGIGK-GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAG  160 (248)
T ss_pred             CCEEEECCCcCC-CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHH
Confidence            999999999865 45666778889999999999999999999999885  4578999999988777664 6889999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ++.+++.++.++.. +++++.|+||+++|++......             .....++++.++.++..++..
T Consensus       161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------------~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------------TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------------CCccCCHHHHHHHHHHHHhcC
Confidence            99999999999987 9999999999999987653221             122468999999988887654

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-33  Score=229.75  Aligned_cols=217  Identities=23%  Similarity=0.345  Sum_probs=178.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||+||||++++++|+++|++|++++|+.+.++...    ..  .+.++++|+++.++++++++.+.+.++++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999999999999999999999976654432    22  3567899999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-CCeEEEEcccCccCCCCCChhhHhhHHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~  171 (255)
                      +|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|++ .++||++||..+..+.+....|+++|++++.++
T Consensus        76 vi~~ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  154 (274)
T PRK05693         76 LINNAGYGA-MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALS  154 (274)
T ss_pred             EEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHH
Confidence            999999865 467778899999999999999999999999998864 479999999999888888999999999999999


Q ss_pred             HHHHHHhCC-CeeEEEEeCCcccCCccccccCCh-----------hHHHHHHh--hcccCCCCCHHHHHHHHHHhcCCC
Q 025273          172 KALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND-----------GVRQTIEQ--NTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       172 ~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~-----------~~~~~~~~--~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ++++.|+.+ ||++++++||+++|++........           ........  ........+|+++++.++..+...
T Consensus       155 ~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~  233 (274)
T PRK05693        155 DALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQS  233 (274)
T ss_pred             HHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence            999999988 999999999999999875432110           00011100  011123458999999988877543

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-33  Score=227.07  Aligned_cols=218  Identities=24%  Similarity=0.299  Sum_probs=179.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH-HHHHh---C
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ-TIEKF---G   88 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-~~~~~---g   88 (255)
                      +++|||||+||||++++++|+++|++|++++|+.+..  .   ....+.++.++++|+++.+++++++++ +.+.+   +
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            4699999999999999999999999999999986531  1   122355789999999999999998877 55555   3


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||+|......++.+.+.+++++.+++|+.+++.+.+.+.+.|+  +.++||++||..+..+.+++..|+++|++
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  156 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAA  156 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHH
Confidence            7999999999876556677889999999999999999999999999886  35799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC----hhHHHHHHhhcccCCCCCHHHHHH-HHHHhcCCC
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----DGVRQTIEQNTLLNRLGTTRDMAA-AAAFLASDD  236 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~a~-~~~~l~s~~  236 (255)
                      ++.+++.++.+ .+ +|+++.|+||+++|++.......    ......+....+.++..+|+|++. .+.+++++.
T Consensus       157 ~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        157 LDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             HHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence            99999999999 55 99999999999999986533211    111222334456678889999999 566777664

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=227.80  Aligned_cols=232  Identities=25%  Similarity=0.396  Sum_probs=189.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      .|++|||||+|+||++++++|+++|++|++++|+.+.++.+.++.   +.++.++++|+++.++++++++++.+.++++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            378999999999999999999999999999999987666554432   35788999999999999999999988889999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++|||||... ..+..+.+.+++++.+++|+.+++++++.++|.|+  ..++||++||..+..+.++...|+++|++++.
T Consensus        79 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (276)
T PRK06482         79 VVVSNAGYGL-FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG  157 (276)
T ss_pred             EEEECCCCCC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence            9999999875 45667778899999999999999999999999886  35799999999988888889999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC-------h----hHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-------D----GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      ++++++.++.+ +++++.++||++.|++.......       .    ...... ......-..+++|+++.++..+....
T Consensus       158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~a~~~~~~~~~  236 (276)
T PRK06482        158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRAL-ADGSFAIPGDPQKMVQAMIASADQTP  236 (276)
T ss_pred             HHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHH-hhccCCCCCCHHHHHHHHHHHHcCCC
Confidence            99999999887 99999999999999876433211       0    111111 11122224689999999998886442


Q ss_pred             CCccccEEEeCCCc
Q 025273          238 SYITGETLVVAGGM  251 (255)
Q Consensus       238 ~~~~G~~i~~dgG~  251 (255)
                         .+..+++.+|.
T Consensus       237 ---~~~~~~~g~~~  247 (276)
T PRK06482        237 ---APRRLTLGSDA  247 (276)
T ss_pred             ---CCeEEecChHH
Confidence               24557776654

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-32  Score=220.59  Aligned_cols=229  Identities=27%  Similarity=0.415  Sum_probs=194.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +.+++++||||+|+||++++++|+++|++|++++|+.+.++...+++... .++.++++|+++.++++++++++.+.+++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999999999999999988877777766543 57889999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      +|++||++|... .+++.+.+.+++++.+++|+.+++.+++++++.++ ..++||++||..+..+......|+.+|++++
T Consensus        83 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~  161 (237)
T PRK07326         83 LDVLIANAGVGH-FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLV  161 (237)
T ss_pred             CCEEEECCCCCC-CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHH
Confidence            999999999765 46677889999999999999999999999999884 4578999999988888888899999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      .+++.++.++.. +++++.|+||++.|++........           .....+++|+++.+.++++.+...+.+++ .+
T Consensus       162 ~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-----------~~~~~~~~d~a~~~~~~l~~~~~~~~~~~-~~  229 (237)
T PRK07326        162 GFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK-----------DAWKIQPEDIAQLVLDLLKMPPRTLPSKI-EV  229 (237)
T ss_pred             HHHHHHHHHhcccCcEEEEEeeccccCcccccccchh-----------hhccCCHHHHHHHHHHHHhCCccccccce-EE
Confidence            999999999877 999999999999998754322110           01136899999999999988877665554 44


Q ss_pred             CCCcc
Q 025273          248 AGGMP  252 (255)
Q Consensus       248 dgG~~  252 (255)
                      -.+.+
T Consensus       230 ~~~~~  234 (237)
T PRK07326        230 RPSRP  234 (237)
T ss_pred             ecCCC
Confidence            44443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.7e-34  Score=215.08  Aligned_cols=183  Identities=21%  Similarity=0.329  Sum_probs=167.2

Q ss_pred             CCCEEEEEcCC-CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH-HhC
Q 025273           11 QGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE-KFG   88 (255)
Q Consensus        11 ~~k~vlItGa~-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~g   88 (255)
                      +.|.|||||++ ||||.+++++|++.|+.|+++.|+.++-.++..+.     .++.+++|+++++++.++..++++ .+|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            36889999975 89999999999999999999999988766655443     688999999999999999999999 679


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcc-cCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      ++|.|+||||... ..+..+.+.++.++.|++|++|.+++++++...+ +..|.|||++|..++.|.+..+.|++||+|+
T Consensus        81 kld~L~NNAG~~C-~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAi  159 (289)
T KOG1209|consen   81 KLDLLYNNAGQSC-TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAI  159 (289)
T ss_pred             ceEEEEcCCCCCc-ccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHH
Confidence            9999999999887 5778889999999999999999999999998644 5788999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCcccc
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEY  199 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~  199 (255)
                      .++++.|+.|+.| ||+|..+.||.+.|++...
T Consensus       160 hay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  160 HAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             HHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            9999999999999 9999999999999987755

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-32  Score=221.86  Aligned_cols=209  Identities=19%  Similarity=0.230  Sum_probs=180.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |+++||||++|||++++++|+++|++|++++|+.++.+...+++... +.++.+++||+++.++++++++++.+   ++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999988877766666543 56899999999999999999887754   579


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++|||+|... .....+.+.+++.+.+++|+.+++++.+.+.+.|+  +.+++|++||..+..+.+....|+++|+++++
T Consensus        79 ~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (243)
T PRK07102         79 IVLIAVGTLG-DQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTA  157 (243)
T ss_pred             EEEECCcCCC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHH
Confidence            9999999765 45667788999999999999999999999999886  45799999999888888888999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      ++++++.|+.+ +|++++|+||+++|++.....            .+.....+|+++++.+...++...
T Consensus       158 ~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~~~~~~  214 (243)
T PRK07102        158 FLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK------------LPGPLTAQPEEVAKDIFRAIEKGK  214 (243)
T ss_pred             HHHHHHHHhhccCcEEEEEecCcccChhhhccC------------CCccccCCHHHHHHHHHHHHhCCC
Confidence            99999999988 999999999999998754321            122335689999999999987653

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=252.95  Aligned_cols=216  Identities=19%  Similarity=0.279  Sum_probs=186.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.+|
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            47799999999999999999999999999999999999888888888876677899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCC--CHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           89 KIDVVVSNAAANPSVDSILQT--KESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++|++|||||.... ..+.+.  ..+++++++++|+.+++.+++.++|.|+  ..++||++||..++.+.+....|+++|
T Consensus       448 ~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  526 (657)
T PRK07201        448 HVDYLVNNAGRSIR-RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASK  526 (657)
T ss_pred             CCCEEEECCCCCCC-CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHH
Confidence            99999999997542 233322  2578999999999999999999999986  457999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ++++.|+++++.|+.+ +|++++|+||+++|++.......           ......+|+++|+.++..+...
T Consensus       527 ~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~-----------~~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        527 AALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRY-----------NNVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             HHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccccc-----------cCCCCCCHHHHHHHHHHHHHhC
Confidence            9999999999999987 99999999999999986532111           1123568999999988866443

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-33  Score=227.78  Aligned_cols=204  Identities=25%  Similarity=0.317  Sum_probs=167.9

Q ss_pred             HHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCcc
Q 025273           28 IAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL  107 (255)
Q Consensus        28 ~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~  107 (255)
                      ++++|+++|++|++++|+.+..+.           ..+++||+++.++++++++++.   +++|++|||||....     
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-----------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~-----   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-----------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT-----   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-----------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC-----
Confidence            478999999999999999765321           2357899999999999988763   689999999997531     


Q ss_pred             CCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc---------------------------CCCCCChhh
Q 025273          108 QTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY---------------------------QPQSSMAMY  160 (255)
Q Consensus       108 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~---------------------------~~~~~~~~y  160 (255)
                          +.+++++++|+.+++.+++.++|+|++.++||++||..++                           .+.++...|
T Consensus        62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  137 (241)
T PRK12428         62 ----APVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGY  137 (241)
T ss_pred             ----CCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHH
Confidence                2378999999999999999999999877899999999876                           255677899


Q ss_pred             HhhHHHHHHHHHHHH-HHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          161 GVTKTALLGLTKALA-AEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       161 ~~sK~a~~~l~~~la-~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      ++||+|++.+++.++ .|+.+ |||||+|+||+++|++..................+.+++.+|+|+++.+.|++++...
T Consensus       138 ~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~  217 (241)
T PRK12428        138 QLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAAR  217 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhc
Confidence            999999999999999 99987 9999999999999998765432111011111234677889999999999999998888


Q ss_pred             CccccEEEeCCCcccC
Q 025273          239 YITGETLVVAGGMPSR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      +++|+.+.+|||+..+
T Consensus       218 ~~~G~~i~vdgg~~~~  233 (241)
T PRK12428        218 WINGVNLPVDGGLAAT  233 (241)
T ss_pred             CccCcEEEecCchHHH
Confidence            9999999999997653

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=222.43  Aligned_cols=204  Identities=21%  Similarity=0.290  Sum_probs=172.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||+||||++++++|+++|++|++++|+.+.++.+.+    ...++.+++||+++.++++++++++..   .+|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~   74 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSANIFTLAFDVTDHPGTKAALSQLPF---IPEL   74 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcCCCeEEEeeCCCHHHHHHHHHhccc---CCCE
Confidence            689999999999999999999999999999999776554433    234678899999999999999887642   5899


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~  172 (255)
                      +|||||... .......+.++|++++++|+.+++++.+.+.|+|++++++|++||..+..+.+....|+++|+++++|++
T Consensus        75 ~i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  153 (240)
T PRK06101         75 WIFNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFAR  153 (240)
T ss_pred             EEEcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHH
Confidence            999998643 2334457889999999999999999999999999877899999999998888899999999999999999


Q ss_pred             HHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          173 ALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       173 ~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      .++.|+.+ +|+++++.||+++|++......            ......+|+++++.++..+...
T Consensus       154 ~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~------------~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        154 TLQLDLRPKGIEVVTVFPGFVATPLTDKNTF------------AMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHhcCceEEEEeCCcCCCCCcCCCCC------------CCCcccCHHHHHHHHHHHHhcC
Confidence            99999977 9999999999999997653211            1122468999999888777554

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=1.6e-32  Score=210.52  Aligned_cols=163  Identities=34%  Similarity=0.563  Sum_probs=153.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCC--chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK--QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      |++|||||++|||++++++|+++|. .|++++|+  .+..+.+.+++...+.++.+++||++++++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            6899999999999999999999965 68889998  67777788888878899999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      +|++|||+|... ..++.+.+.++|++.+++|+.+++.+.+.++|  +++++||++||..+..+.+.+..|+++|+|+.+
T Consensus        81 ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~  157 (167)
T PF00106_consen   81 LDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAGVRGSPGMSAYSASKAALRG  157 (167)
T ss_dssp             ESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHH
T ss_pred             cccccccccccc-ccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhhccCCCCChhHHHHHHHHHH
Confidence            999999999987 78889999999999999999999999999999  778999999999999999999999999999999


Q ss_pred             HHHHHHHHh
Q 025273          170 LTKALAAEM  178 (255)
Q Consensus       170 l~~~la~e~  178 (255)
                      |++++++|+
T Consensus       158 ~~~~la~e~  166 (167)
T PF00106_consen  158 LTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08177 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-31  Score=210.44  Aligned_cols=179  Identities=20%  Similarity=0.302  Sum_probs=153.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |+++||||+++||++++++|+++|++|++++|+.+..+.+.+     ..++.+.++|+++.++++++++++.+  +++|+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~   74 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-----LPGVHIEKLDMNDPASLDQLLQRLQG--QRFDL   74 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-----ccccceEEcCCCCHHHHHHHHHHhhc--CCCCE
Confidence            689999999999999999999999999999999876554322     13567788999999999999988753  47999


Q ss_pred             EEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC-CeEEEEcccCccCC---CCCChhhHhhHHHH
Q 025273           93 VVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISSIAGYQP---QSSMAMYGVTKTAL  167 (255)
Q Consensus        93 lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~iss~~~~~~---~~~~~~y~~sK~a~  167 (255)
                      +|||+|.... ..++.+.+.+++++.+++|+.+++.+.+.+++.+++. +.++++||..+..+   ...+..|+++|+++
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~  154 (225)
T PRK08177         75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAAL  154 (225)
T ss_pred             EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHH
Confidence            9999998643 3456778899999999999999999999999998754 78999999776543   34667899999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccc
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAE  198 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~  198 (255)
                      +.|++.++.|+.+ +|++++|+||+++|++..
T Consensus       155 ~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~  186 (225)
T PRK08177        155 NSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG  186 (225)
T ss_pred             HHHHHHHHHHhhcCCeEEEEEcCCceecCCCC
Confidence            9999999999987 999999999999999854

>PRK08264 short chain dehydrogenase; Validated

Probab=99.98  E-value=2.8e-30  Score=209.16  Aligned_cols=202  Identities=26%  Similarity=0.349  Sum_probs=171.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++++|||||+|+||++++++|+++|+ +|++++|+.++++.       .+.++.++++|+++.++++++++.    +
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~----~   71 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA----A   71 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh----c
Confidence            46789999999999999999999999999 89999999765442       345788999999999998887764    4


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +++|++||++|......++.+.+.+++++.+++|+.+++.+.+++.+.++  +.++++++||..++.+.++...|+.+|+
T Consensus        72 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~  151 (238)
T PRK08264         72 SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKA  151 (238)
T ss_pred             CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHH
Confidence            67999999999854467788889999999999999999999999999885  4578999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      +++.+++.++.++.+ +++++.++||.++|++......               ...++++++..++..+...
T Consensus       152 a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~---------------~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        152 AAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDA---------------PKASPADVARQILDALEAG  208 (238)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCc---------------CCCCHHHHHHHHHHHHhCC
Confidence            999999999999987 9999999999999987543211               1346777777776665443

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.1e-30  Score=209.89  Aligned_cols=216  Identities=21%  Similarity=0.287  Sum_probs=175.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.++.+.+.....+.++.++++|+++.++++++++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            5789999999999999999999999999999999877776666665556678999999999998877653      3799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++|||||... ..+..+.+.+++++.+++|+.+++.+.+.+++.++  +.++||++||..+..+.+....|+++|++++.
T Consensus        76 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~  154 (257)
T PRK09291         76 VLLNNAGIGE-AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEA  154 (257)
T ss_pred             EEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHH
Confidence            9999999875 56778889999999999999999999999999875  34799999999888888888999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC--------hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN--------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      +++.++.++.+ +|++++|+||++.|++.......        ...........+. ...+++|+++.+..++..
T Consensus       155 ~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        155 IAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHhcC
Confidence            99999999877 99999999999999875432211        0001101111122 235899998888776644

>PRK08017 oxidoreductase; Provisional

Probab=99.98  E-value=4.9e-30  Score=209.87  Aligned_cols=219  Identities=16%  Similarity=0.227  Sum_probs=178.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-GKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~~d   91 (255)
                      |++|||||+|+||++++++|+++|++|++++|+.+.++...    ..  .+..++||+++.++++++++.+.... +.+|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            68999999999999999999999999999999987655432    22  36778999999999999999887754 6899


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      .+||++|... ..++.+.+.+++++.+++|+.|++.+.+.+++.++  +.++||++||..+..+.+....|+++|++++.
T Consensus        77 ~ii~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~  155 (256)
T PRK08017         77 GLFNNAGFGV-YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEA  155 (256)
T ss_pred             EEEECCCCCC-ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHH
Confidence            9999999755 45677888999999999999999999999999885  34789999999888888889999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      ++++++.++.+ +++++.+.||++.|++....................+.+..|+|+++.+..+++....
T Consensus       156 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        156 WSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             HHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence            99999999877 9999999999999987755432111000000000112357999999999999877654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=2.8e-31  Score=213.24  Aligned_cols=186  Identities=27%  Similarity=0.406  Sum_probs=167.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhC--
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFG--   88 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--   88 (255)
                      |++++||||+.|||++.+++|+++|.+|++++|++++++.+++++.+. +.+++++.+|.++.+++   .+++.+.+.  
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~---ye~i~~~l~~~  125 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEV---YEKLLEKLAGL  125 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchh---HHHHHHHhcCC
Confidence            699999999999999999999999999999999999999999999877 67899999999988873   333434332  


Q ss_pred             CCCEEEEcCCCCC-CCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++.+||||+|... .+..+.+.+.+++++.+.+|..+...+++.++|.|.  +.|.|+++||.++..|.|.+..|+++|+
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~  205 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKA  205 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHH
Confidence            6777999999875 356788888889999999999999999999999995  6789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccc
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI  200 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~  200 (255)
                      .+..|+++|..|+.. ||.|-++.|.+|.|+|...-
T Consensus       206 ~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  206 FVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence            999999999999988 99999999999999987544

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=202.46  Aligned_cols=212  Identities=17%  Similarity=0.196  Sum_probs=173.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |+++||||+++||++++++|+++|++|++++|+.+..+.+.    ..  .+.++++|+++.++++++++++..  +++|+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~   73 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL--GAEALALDVADPASVAGLAWKLDG--EALDA   73 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc--cceEEEecCCCHHHHHHHHHHhcC--CCCCE
Confidence            67999999999999999999999999999999977655432    22  345789999999999998776532  47999


Q ss_pred             EEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCC---hhhHhhHHHH
Q 025273           93 VVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSM---AMYGVTKTAL  167 (255)
Q Consensus        93 lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~---~~y~~sK~a~  167 (255)
                      +||++|.... .....+.+.++|++.+++|+.+++.+++++.+.|+ ..++++++||..+..+..+.   ..|+++|+++
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~  153 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAAL  153 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHHH
Confidence            9999998632 34556678999999999999999999999999885 35789999998765543222   3699999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +.+++.++.++. ++++++|+||+++|++...                 .....+++.+..++.+++......+|..+..
T Consensus       154 ~~~~~~~~~~~~-~i~v~~v~Pg~i~t~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (222)
T PRK06953        154 NDALRAASLQAR-HATCIALHPGWVRTDMGGA-----------------QAALDPAQSVAGMRRVIAQATRRDNGRFFQY  215 (222)
T ss_pred             HHHHHHHhhhcc-CcEEEEECCCeeecCCCCC-----------------CCCCCHHHHHHHHHHHHHhcCcccCceEEee
Confidence            999999998864 7999999999999997531                 1124788888888887777777888999988


Q ss_pred             CCC
Q 025273          248 AGG  250 (255)
Q Consensus       248 dgG  250 (255)
                      |++
T Consensus       216 ~~~  218 (222)
T PRK06953        216 DGV  218 (222)
T ss_pred             CCc
Confidence            876

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.8e-31  Score=204.44  Aligned_cols=235  Identities=26%  Similarity=0.261  Sum_probs=190.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .+|++|+||+|.|||..+++-+.+++-.....++++...+ ........+........|++...-+.++++..++++++.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            4678999999999999999988888766444444433322 111111223455556678888888899999999999999


Q ss_pred             CEEEEcCCCCCCCCCcc--CCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC---CeEEEEcccCccCCCCCChhhHhhHH
Q 025273           91 DVVVSNAAANPSVDSIL--QTKESVLDKLWDINVKSSILLLQDAAPHLQKG---SSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|||||.........  ..+.++|++.|++|+++++-+.+.++|.+++.   +.+||+||.++..|+..|..|+.+|+
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~Ka  163 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKA  163 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHH
Confidence            99999999876544433  67788999999999999999999999998754   89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC----ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       166 a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      |.++|.+.+|.|-+.+|++.++.||.+||+|+.....    .+.....+.+....+++.+|...++.+..|+.... +.+
T Consensus       164 Ar~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~-f~s  242 (253)
T KOG1204|consen  164 ARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKGD-FVS  242 (253)
T ss_pred             HHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhcC-ccc
Confidence            9999999999995458999999999999999876643    34555667777788899999999999999986654 889


Q ss_pred             ccEEEe
Q 025273          242 GETLVV  247 (255)
Q Consensus       242 G~~i~~  247 (255)
                      |+.+.-
T Consensus       243 G~~vdy  248 (253)
T KOG1204|consen  243 GQHVDY  248 (253)
T ss_pred             cccccc
Confidence            997653

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.1e-29  Score=202.29  Aligned_cols=194  Identities=18%  Similarity=0.153  Sum_probs=148.0

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++|++|||||+||||++++++|+++|++|++++|+......  ..  ... ...++++|+++.+++++       .++
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~~--~~~-~~~~~~~D~~~~~~~~~-------~~~   78 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--SN--DES-PNEWIKWECGKEESLDK-------QLA   78 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--hh--ccC-CCeEEEeeCCCHHHHHH-------hcC
Confidence            4789999999999999999999999999999999998632111  11  111 22567899999988764       356


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-----CCeEEEEcccCccCCCCCChhhHhh
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      ++|++|||||...    ..+.+.++|++.+++|+.+++.+++.++|.|++     ++.+++.||.++..+ +..+.|++|
T Consensus        79 ~iDilVnnAG~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aS  153 (245)
T PRK12367         79 SLDVLILNHGINP----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEIS  153 (245)
T ss_pred             CCCEEEECCccCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHH
Confidence            8999999999743    234678999999999999999999999999853     333545556555544 356789999


Q ss_pred             HHHHHHHH---HHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          164 KTALLGLT---KALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       164 K~a~~~l~---~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      |+|+..+.   +.++.|..+ +++++.+.||+++|++..                  ....+|+|+|+.+++.++...
T Consensus       154 Kaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~------------------~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        154 KRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP------------------IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc------------------cCCCCHHHHHHHHHHHHhcCC
Confidence            99986554   344444455 999999999999998621                  124689999999999986653

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.7e-29  Score=201.58  Aligned_cols=218  Identities=22%  Similarity=0.191  Sum_probs=187.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +.++|||+++|||.+++..+.++|+.|.++.|+.++++.++++++-.  ...+.+..+|+++-+++..+++++++.++.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            68999999999999999999999999999999999999998888654  3347788999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      |.+|||||... .+.+.+.++++++..+++|++|+++++++.++.|++   .|+|+.+||.++..+..++..|+++|.|+
T Consensus       114 d~l~~cAG~~v-~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al  192 (331)
T KOG1210|consen  114 DNLFCCAGVAV-PGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL  192 (331)
T ss_pred             ceEEEecCccc-ccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence            99999999876 688999999999999999999999999999999984   34999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      .+|+..+++|+.+ +|+|....|+.++||-+..-....+......  .......++|+++..++.-+
T Consensus       193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii--~g~ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKII--EGGSSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeee--cCCCCCcCHHHHHHHHHhHH
Confidence            9999999999987 9999999999999996643322221111111  12223468899998876554

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-28  Score=197.21  Aligned_cols=220  Identities=22%  Similarity=0.296  Sum_probs=178.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      .|++|||||+|+||++++++|+++ ++|++++|+.+..+.+.++.    ..+.++++|+++.++++++++.+    +++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~----~~id   73 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL----GRLD   73 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc----CCCC
Confidence            478999999999999999999999 99999999977655544332    25778899999999988877653    4799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l  170 (255)
                      ++||++|... ..+..+.+.++|.+.+++|+.+++.+.+.+++.++ ..+++|++||..+..+.++...|+.+|++++.+
T Consensus        74 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~  152 (227)
T PRK08219         74 VLVHNAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRAL  152 (227)
T ss_pred             EEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCCCchHHHHHHHHHHH
Confidence            9999999865 45667788999999999999999999999999876 467999999999988888899999999999999


Q ss_pred             HHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          171 TKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       171 ~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ++.++.++...++++++.||++++++........      ....+.+++.+++|+++.++++++...   ++.+++++.+
T Consensus       153 ~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~------~~~~~~~~~~~~~dva~~~~~~l~~~~---~~~~~~~~~~  223 (227)
T PRK08219        153 ADALREEEPGNVRVTSVHPGRTDTDMQRGLVAQE------GGEYDPERYLRPETVAKAVRFAVDAPP---DAHITEVVVR  223 (227)
T ss_pred             HHHHHHHhcCCceEEEEecCCccchHhhhhhhhh------ccccCCCCCCCHHHHHHHHHHHHcCCC---CCccceEEEe
Confidence            9999888654499999999999987654322111      111233567899999999999997653   4555555443

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=3.1e-26  Score=196.63  Aligned_cols=194  Identities=19%  Similarity=0.211  Sum_probs=149.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++|+++||||+||||++++++|+++|++|++++|+.++++.   ........+..+.+|+++++++.+.       ++
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~---~~~~~~~~v~~v~~Dvsd~~~v~~~-------l~  244 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITL---EINGEDLPVKTLHWQVGQEAALAEL-------LE  244 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHhhcCCCeEEEEeeCCCHHHHHHH-------hC
Confidence            4679999999999999999999999999999999998765432   2222233567889999999887654       35


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC------CeEEEEcccCccCCCCCChhhHh
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG------SSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      ++|++|||||...    ..+.+.+++++++++|+.|++.+++.++|.|++.      +.++++|+ ++ ...+..+.|++
T Consensus       245 ~IDiLInnAGi~~----~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~A  318 (406)
T PRK07424        245 KVDILIINHGINV----HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYEL  318 (406)
T ss_pred             CCCEEEECCCcCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHH
Confidence            8999999999753    2367889999999999999999999999998632      23566654 33 33345678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      ||+|+..|++ +.++. .++.+..+.||+++|++..                 . ...+|+++|+.+++.++.+..
T Consensus       319 SKaAl~~l~~-l~~~~-~~~~I~~i~~gp~~t~~~~-----------------~-~~~spe~vA~~il~~i~~~~~  374 (406)
T PRK07424        319 SKRALGDLVT-LRRLD-APCVVRKLILGPFKSNLNP-----------------I-GVMSADWVAKQILKLAKRDFR  374 (406)
T ss_pred             HHHHHHHHHH-HHHhC-CCCceEEEEeCCCcCCCCc-----------------C-CCCCHHHHHHHHHHHHHCCCC
Confidence            9999999985 44443 2566777889999887531                 1 135899999999999977654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.95  E-value=1.1e-25  Score=225.47  Aligned_cols=182  Identities=18%  Similarity=0.195  Sum_probs=159.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCc-------------------------------------------
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQ-------------------------------------------   46 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~-------------------------------------------   46 (255)
                      +++++|||||++|||.+++++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 69999999982                                           


Q ss_pred             ----hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHh
Q 025273           47 ----KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV  122 (255)
Q Consensus        47 ----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~  122 (255)
                          .+.+...+++...+.++.++.||++|.++++++++++.+. +++|+||||||+.. .+.+.+.+.++|++++++|+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~-~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA-DKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHH
Confidence                0111223334445778999999999999999999999876 68999999999875 57788999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcc
Q 025273          123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (255)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~  197 (255)
                      .|.+++++++.+.+.  ++||++||..+..+.+++..|+++|++++.+++.++.++. ++|+++|+||+++|+|.
T Consensus      2154 ~G~~~Ll~al~~~~~--~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~-~irV~sI~wG~wdtgm~ 2225 (2582)
T TIGR02813      2154 DGLLSLLAALNAENI--KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP-SAKVMSFNWGPWDGGMV 2225 (2582)
T ss_pred             HHHHHHHHHHHHhCC--CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC-CcEEEEEECCeecCCcc
Confidence            999999999887553  4799999999999999999999999999999999999875 59999999999999885

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.93  E-value=2e-24  Score=166.37  Aligned_cols=175  Identities=21%  Similarity=0.219  Sum_probs=148.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHH---HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEA---VVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      |+++||||+++||++++++|+++|+ .|++++|+.+..+..   .+++...+.++.++++|++++++++++++++...++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 588888876544332   244545567888999999999999999999988889


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ++|.+||++|... .....+.+.+++++.+++|+.+++.+.+.+.+.  +.++++++||..+..+.+....|+++|++++
T Consensus        81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~  157 (180)
T smart00822       81 PLRGVIHAAGVLD-DGLLANLTPERFAAVLAPKVDGAWNLHELTRDL--PLDFFVLFSSVAGVLGNPGQANYAAANAFLD  157 (180)
T ss_pred             CeeEEEEccccCC-ccccccCCHHHHHHhhchHhHHHHHHHHHhccC--CcceEEEEccHHHhcCCCCchhhHHHHHHHH
Confidence            9999999999765 456677888999999999999999999988542  4468999999998888889999999999999


Q ss_pred             HHHHHHHHHhCCCeeEEEEeCCccc
Q 025273          169 GLTKALAAEMAPDTRVNCVAPGFVP  193 (255)
Q Consensus       169 ~l~~~la~e~~~~v~v~~v~pg~v~  193 (255)
                      .+++.++.+   ++++..+.||++.
T Consensus       158 ~~~~~~~~~---~~~~~~~~~g~~~  179 (180)
T smart00822      158 ALAAHRRAR---GLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHhc---CCceEEEeecccc
Confidence            999876543   7789999999874

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.93  E-value=2.9e-24  Score=181.55  Aligned_cols=216  Identities=18%  Similarity=0.109  Sum_probs=157.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++|++|||||+|+||++++++|+++|  ++|++++|+......+.+.+.  ..++.++++|+++.+++.++++      
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence            468999999999999999999999986  689999988665444333332  2478889999999999888765      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                       .+|++||+||....  +..+.+   .++.+++|+.+++++++++.+.  ..++||++||.....   +...|+++|++.
T Consensus        74 -~iD~Vih~Ag~~~~--~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~--~~~~iV~~SS~~~~~---p~~~Y~~sK~~~  142 (324)
T TIGR03589        74 -GVDYVVHAAALKQV--PAAEYN---PFECIRTNINGAQNVIDAAIDN--GVKRVVALSTDKAAN---PINLYGATKLAS  142 (324)
T ss_pred             -cCCEEEECcccCCC--chhhcC---HHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeCCCCCC---CCCHHHHHHHHH
Confidence             58999999997531  222222   2468999999999999999864  235899999976543   357899999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhh---c------ccCCCCCHHHHHHHHHHhcCCCC
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN---T------LLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +.+++.++.+... +++++.+.||.+.++-.. ..  +.+.......   .      ..+.+..++|++++++.++... 
T Consensus       143 E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~i--~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~-  218 (324)
T TIGR03589       143 DKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-VV--PFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM-  218 (324)
T ss_pred             HHHHHHHHhhccccCcEEEEEeecceeCCCCC-cH--HHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC-
Confidence            9999998887766 999999999999886321 10  1111111111   1      1123678999999998888542 


Q ss_pred             CCccccEEEeCCCc
Q 025273          238 SYITGETLVVAGGM  251 (255)
Q Consensus       238 ~~~~G~~i~~dgG~  251 (255)
                        ..|+++ +..|.
T Consensus       219 --~~~~~~-~~~~~  229 (324)
T TIGR03589       219 --LGGEIF-VPKIP  229 (324)
T ss_pred             --CCCCEE-ccCCC
Confidence              146666 44443

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.93  E-value=1.7e-23  Score=177.18  Aligned_cols=222  Identities=18%  Similarity=0.148  Sum_probs=161.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++|++|||||+|+||++++++|+++|++|+++.|+....+.........  ..++.++++|+++.++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4799999999999999999999999999999998876554432222211  2478889999999999888775       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCC-------------
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS-------------  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~-------------  155 (255)
                      ++|++||+||....     ..+.+.+.+.+++|+.+++++++++.+.+. .++||++||..++.+..             
T Consensus        77 ~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~  150 (325)
T PLN02989         77 GCETVFHTASPVAI-----TVKTDPQVELINPAVNGTINVLRTCTKVSS-VKRVILTSSMAAVLAPETKLGPNDVVDETF  150 (325)
T ss_pred             CCCEEEEeCCCCCC-----CCCCChHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEEecchhheecCCccCCCCCccCcCC
Confidence            68999999996431     223345788999999999999999987653 46999999976542210             


Q ss_pred             ---------CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC-hhHHHHH-Hhhccc----CCCC
Q 025273          156 ---------SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN-DGVRQTI-EQNTLL----NRLG  220 (255)
Q Consensus       156 ---------~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~-~~~~~~~-~~~~~~----~~~~  220 (255)
                               ....|+.+|.+.+.+++.++.++  ++.+..+.|+.+.+|........ ....... ....+.    +.+.
T Consensus       151 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i  228 (325)
T PLN02989        151 FTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN--EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFV  228 (325)
T ss_pred             CCchhHhcccccchHHHHHHHHHHHHHHHHHc--CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCee
Confidence                     12469999999999999888776  78899999999998865422110 1111111 111122    3567


Q ss_pred             CHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          221 TTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       221 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      .++|++++++.++.....   +..++++|+
T Consensus       229 ~v~Dva~a~~~~l~~~~~---~~~~ni~~~  255 (325)
T PLN02989        229 DVRDVALAHVKALETPSA---NGRYIIDGP  255 (325)
T ss_pred             EHHHHHHHHHHHhcCccc---CceEEEecC
Confidence            789999999888765432   346788544

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.93  E-value=1.3e-23  Score=184.89  Aligned_cols=220  Identities=16%  Similarity=0.148  Sum_probs=161.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc---------CCeEEEEEecCCCHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR---------GIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      .+||++|||||+|+||++++++|+++|++|++++|+.+.++.+.+++...         ..++.++.+|+++.+++++. 
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-
Confidence            46899999999999999999999999999999999998877766655321         13588999999998887654 


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-CCCCCChh
Q 025273           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-QPQSSMAM  159 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~  159 (255)
                            ++.+|+||||+|....       ...++...+++|+.+..++++++...  +.++||++||.++. .+.+. ..
T Consensus       157 ------LggiDiVVn~AG~~~~-------~v~d~~~~~~VN~~Gt~nLl~Aa~~a--gVgRIV~VSSiga~~~g~p~-~~  220 (576)
T PLN03209        157 ------LGNASVVICCIGASEK-------EVFDVTGPYRIDYLATKNLVDAATVA--KVNHFILVTSLGTNKVGFPA-AI  220 (576)
T ss_pred             ------hcCCCEEEEccccccc-------cccchhhHHHHHHHHHHHHHHHHHHh--CCCEEEEEccchhcccCccc-cc
Confidence                  4589999999996431       11246778999999999999988764  34699999998764 22222 22


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      |. +|+++..+.+.+..++.. ||+++.|+||++.|++..... ...... .....+.++.+.++|+|+.++++++....
T Consensus       221 ~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~-t~~v~~-~~~d~~~gr~isreDVA~vVvfLasd~~a  297 (576)
T PLN03209        221 LN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE-THNLTL-SEEDTLFGGQVSNLQVAELMACMAKNRRL  297 (576)
T ss_pred             hh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCcccccc-ccceee-ccccccCCCccCHHHHHHHHHHHHcCchh
Confidence            43 788888888888888776 999999999999987543211 111111 11124567788999999999999985532


Q ss_pred             CccccEEEeCCC
Q 025273          239 YITGETLVVAGG  250 (255)
Q Consensus       239 ~~~G~~i~~dgG  250 (255)
                      . .++++.+-.+
T Consensus       298 s-~~kvvevi~~  308 (576)
T PLN03209        298 S-YCKVVEVIAE  308 (576)
T ss_pred             c-cceEEEEEeC
Confidence            1 2455555433

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.92  E-value=2.6e-23  Score=177.62  Aligned_cols=229  Identities=15%  Similarity=0.061  Sum_probs=164.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++||++|||||+|+||+++++.|+++|++|++++|+..........+. ...++.++.+|+++.+++.+++++.     +
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~   75 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF-----K   75 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc-----C
Confidence            468999999999999999999999999999999998765443333232 2346778899999999999988864     6


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC------------CCCCC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------PQSSM  157 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------------~~~~~  157 (255)
                      +|++||+|+...     ...+.+++...+++|+.+++++++++.+. ...+++|++||...+.            +..+.
T Consensus        76 ~d~vih~A~~~~-----~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~  149 (349)
T TIGR02622        76 PEIVFHLAAQPL-----VRKSYADPLETFETNVMGTVNLLEAIRAI-GSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGH  149 (349)
T ss_pred             CCEEEECCcccc-----cccchhCHHHHHHHhHHHHHHHHHHHHhc-CCCCEEEEEechhhhCCCCCCCCCccCCCCCCC
Confidence            999999999533     12344567788999999999999987542 2246899999964431            23456


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCC-----CeeEEEEeCCcccCCccccccC-ChhHHHHHHhh--------cccCCCCCHH
Q 025273          158 AMYGVTKTALLGLTKALAAEMAP-----DTRVNCVAPGFVPTHFAEYITS-NDGVRQTIEQN--------TLLNRLGTTR  223 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~-----~v~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~  223 (255)
                      .+|+.+|.+.+.+++.++.++.+     +++++.+.|+.+..|....... -+.+.......        ...+.+...+
T Consensus       150 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~  229 (349)
T TIGR02622       150 DPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVL  229 (349)
T ss_pred             CcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHH
Confidence            78999999999999999988743     7999999999998874211000 11122211111        1233456788


Q ss_pred             HHHHHHHHhcCCC--CCCccccEEEeCCC
Q 025273          224 DMAAAAAFLASDD--ASYITGETLVVAGG  250 (255)
Q Consensus       224 d~a~~~~~l~s~~--~~~~~G~~i~~dgG  250 (255)
                      |++++++.++...  .....|+.+++.+|
T Consensus       230 D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       230 EPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             HHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            9999888766431  11123578999765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.92  E-value=3.5e-23  Score=173.61  Aligned_cols=190  Identities=19%  Similarity=0.163  Sum_probs=149.8

Q ss_pred             CCCEEEEEcCCCchHHH--HHHHHHHcCCeEEEEeCCchhHH------------HHHHHHHhcCCeEEEEEecCCCHHHH
Q 025273           11 QGKVAIVTASTQGIGFG--IAERLGLEGASVVVSSRKQKNVD------------EAVVKLKARGIEVIGVVCHVSNGQQR   76 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~--~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~Dv~~~~~v   76 (255)
                      -+|++||||+++|||.+  +++.| ++|++|+++++..++.+            .+.+.+...+..+..++||+++.+++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            36999999999999999  89999 99999888886432222            23444444466788899999999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCC----------------c-----------------cCCCHHHHHHHHHHHhH
Q 025273           77 KNLINQTIEKFGKIDVVVSNAAANPSVDS----------------I-----------------LQTKESVLDKLWDINVK  123 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~~~~~----------------~-----------------~~~~~~~~~~~~~~n~~  123 (255)
                      +++++.+.+.+|++|+||||+|......+                +                 ...+.++++.++  +++
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv--~vM  196 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV--KVM  196 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH--Hhh
Confidence            99999999999999999999998643221                1                 134556666654  444


Q ss_pred             HH-----HHHHHHHhhcccCCCeEEEEcccCccCCCCCC--hhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCC
Q 025273          124 SS-----ILLLQDAAPHLQKGSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTH  195 (255)
Q Consensus       124 ~~-----~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~  195 (255)
                      |.     |.=.....+.|.++++++..|+..+....+.+  ..-+.+|++++.-++.|+.++++ |+|+|++++|++.|.
T Consensus       197 ggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~  276 (398)
T PRK13656        197 GGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQ  276 (398)
T ss_pred             ccchHHHHHHHHHhcccccCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccch
Confidence            43     22344455678889999999999888777776  48899999999999999999999 999999999999998


Q ss_pred             ccccccCC
Q 025273          196 FAEYITSN  203 (255)
Q Consensus       196 ~~~~~~~~  203 (255)
                      ....++..
T Consensus       277 Ass~Ip~~  284 (398)
T PRK13656        277 ASSAIPVM  284 (398)
T ss_pred             hhhcCCCc
Confidence            77666543

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.92  E-value=1.5e-23  Score=178.46  Aligned_cols=230  Identities=19%  Similarity=0.109  Sum_probs=158.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-----HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-----VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      .++++|+||||||+|+||++++++|+++|++|++++|+.+.     ++.+..+....+.++.++.+|+++.++++++++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999987542     2211111111134688999999999999998886


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCC---eEEEEcccCccC-------
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGS---SVVLISSIAGYQ-------  152 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~iv~iss~~~~~-------  152 (255)
                      +     .+|++||+|+.....     ...+..+..+++|+.++.++++++.+.+.+.+   ++|++||...+.       
T Consensus        82 ~-----~~d~Vih~A~~~~~~-----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~  151 (340)
T PLN02653         82 I-----KPDEVYNLAAQSHVA-----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQS  151 (340)
T ss_pred             c-----CCCEEEECCcccchh-----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCC
Confidence            5     699999999975421     12234567789999999999999988765433   788888764332       


Q ss_pred             ---CCCCChhhHhhHHHHHHHHHHHHHHhCC----CeeEEEEeCCcccCCccccccCChhHHHHH----------Hhhcc
Q 025273          153 ---PQSSMAMYGVTKTALLGLTKALAAEMAP----DTRVNCVAPGFVPTHFAEYITSNDGVRQTI----------EQNTL  215 (255)
Q Consensus       153 ---~~~~~~~y~~sK~a~~~l~~~la~e~~~----~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~----------~~~~~  215 (255)
                         +..+...|+.||.+.+.+++.++.+++.    .+.++.+.|+...+.+...+   .......          .....
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~g~~  228 (340)
T PLN02653        152 ETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKI---TRAVGRIKVGLQKKLFLGNLDA  228 (340)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHH---HHHHHHHHcCCCCceEeCCCcc
Confidence               2234678999999999999999988742    23445555654322110000   0000000          11112


Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          216 LNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       216 ~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ...++..+|++++++.++....    +..+++.+|...+
T Consensus       229 ~rd~i~v~D~a~a~~~~~~~~~----~~~yni~~g~~~s  263 (340)
T PLN02653        229 SRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEESHT  263 (340)
T ss_pred             eecceeHHHHHHHHHHHHhcCC----CCcEEecCCCcee
Confidence            2356789999999998886532    4568998887654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=1e-21  Score=166.06  Aligned_cols=222  Identities=18%  Similarity=0.147  Sum_probs=158.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA--RGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+||++|||||+|+||++++++|+++|++|+++.|+....+...+....  ...++.++.+|+++.++++++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            4689999999999999999999999999999999987655443332221  13478889999999998888776      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-CC------------
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-PQ------------  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-~~------------  154 (255)
                       .+|++||+|+....  ..  .  +...+.+++|+.++.++++++.... ..++||++||..++. +.            
T Consensus        77 -~~d~vih~A~~~~~--~~--~--~~~~~~~~~nv~gt~~ll~~~~~~~-~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~  148 (322)
T PLN02986         77 -GCDAVFHTASPVFF--TV--K--DPQTELIDPALKGTINVLNTCKETP-SVKRVILTSSTAAVLFRQPPIEANDVVDET  148 (322)
T ss_pred             -CCCEEEEeCCCcCC--CC--C--CchhhhhHHHHHHHHHHHHHHHhcC-CccEEEEecchhheecCCccCCCCCCcCcc
Confidence             58999999996431  11  1  1235678999999999999876532 235899999976431 10            


Q ss_pred             ---------CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC-ChhHHHHHHhhc-----ccCCC
Q 025273          155 ---------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS-NDGVRQTIEQNT-----LLNRL  219 (255)
Q Consensus       155 ---------~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~-----~~~~~  219 (255)
                               .+...|+.||.+.+.+++.+.+++  ++++..++|+.+.+|....... .......+....     ....+
T Consensus       149 ~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~--~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  226 (322)
T PLN02986        149 FFSDPSLCRETKNWYPLSKILAENAAWEFAKDN--GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRF  226 (322)
T ss_pred             cCCChHHhhccccchHHHHHHHHHHHHHHHHHh--CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcce
Confidence                     013569999999999999888776  7899999999999886532211 111121111111     12347


Q ss_pred             CCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          220 GTTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       220 ~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ..++|+|++++.++.....  .| .++++|+
T Consensus       227 v~v~Dva~a~~~al~~~~~--~~-~yni~~~  254 (322)
T PLN02986        227 VDVRDVALAHIKALETPSA--NG-RYIIDGP  254 (322)
T ss_pred             eEHHHHHHHHHHHhcCccc--CC-cEEEecC
Confidence            7899999999988865432  34 6888543

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.90  E-value=1.2e-21  Score=167.71  Aligned_cols=225  Identities=14%  Similarity=0.048  Sum_probs=156.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEE-EEeCCchhH--HHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVV-VSSRKQKNV--DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~-~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      |++|||||+|+||++++++|.++|+.++ +++|.....  .... .+ ....++.++.+|+++.+++++++++.     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PV-AQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hc-ccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            5799999999999999999999998844 555543211  1111 11 12346778899999999998887753     6


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-------CCCeEEEEcccCccC----------
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-------KGSSVVLISSIAGYQ----------  152 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-------~~~~iv~iss~~~~~----------  152 (255)
                      +|.|||+||....     ..+.+.++..+++|+.++.++++++.+.+.       ...++|++||...+.          
T Consensus        75 ~D~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  149 (355)
T PRK10217         75 PDCVMHLAAESHV-----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT  149 (355)
T ss_pred             CCEEEECCcccCc-----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence            9999999997531     233455788999999999999999987531       234899999864322          


Q ss_pred             ---CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhh---------cccCCCC
Q 025273          153 ---PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN---------TLLNRLG  220 (255)
Q Consensus       153 ---~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~  220 (255)
                         +..+...|+.||.+.+.+++.+++++  ++++..+.|+.+..|-......-..+.......         .....++
T Consensus       150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  227 (355)
T PRK10217        150 ETTPYAPSSPYSASKASSDHLVRAWLRTY--GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWL  227 (355)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh--CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcC
Confidence               23456789999999999999998887  566777788777665431100001111111111         1123477


Q ss_pred             CHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          221 TTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       221 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ..+|++.++..++...   ..|+++++.+|...+
T Consensus       228 ~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~s  258 (355)
T PRK10217        228 YVEDHARALYCVATTG---KVGETYNIGGHNERK  258 (355)
T ss_pred             cHHHHHHHHHHHHhcC---CCCCeEEeCCCCccc
Confidence            8999999998887543   247889999887653

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=5.9e-22  Score=153.70  Aligned_cols=173  Identities=20%  Similarity=0.251  Sum_probs=136.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCc---hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ---KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++|||||.||||..+++.|+++|. +|++++|+.   ...+...+++...+.++.+++||++++++++++++++.+.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999999999985 599999992   3445677778888899999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ++.+||+||... ...+.+.++++++.++...+.|..++.+.+.+  .+-..+|.+||..+..+.++...|+++.+.++.
T Consensus        82 i~gVih~ag~~~-~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~--~~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda  158 (181)
T PF08659_consen   82 IDGVIHAAGVLA-DAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN--RPLDFFILFSSISSLLGGPGQSAYAAANAFLDA  158 (181)
T ss_dssp             EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT--TTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHH
T ss_pred             cceeeeeeeeec-ccccccCCHHHHHHHHhhhhhHHHHHHHHhhc--CCCCeEEEECChhHhccCcchHhHHHHHHHHHH
Confidence            999999999876 57889999999999999999999999998866  234589999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCeeEEEEeCCcc
Q 025273          170 LTKALAAEMAPDTRVNCVAPGFV  192 (255)
Q Consensus       170 l~~~la~e~~~~v~v~~v~pg~v  192 (255)
                      |++..+..   +.++.+|.-|..
T Consensus       159 ~a~~~~~~---g~~~~sI~wg~W  178 (181)
T PF08659_consen  159 LARQRRSR---GLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHT---TSEEEEEEE-EB
T ss_pred             HHHHHHhC---CCCEEEEEcccc
Confidence            99976553   455667766543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.89  E-value=5e-21  Score=162.90  Aligned_cols=214  Identities=16%  Similarity=0.079  Sum_probs=151.3

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHH--HHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV--KLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      .-...++|++|||||+|+||++++++|+++|++|+++.|+.+.......  .+. ...++.++.+|+++.+++.++++  
T Consensus         3 ~~~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--   79 (338)
T PLN00198          3 TLTPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQ-ELGDLKIFGADLTDEESFEAPIA--   79 (338)
T ss_pred             cccCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcC-CCCceEEEEcCCCChHHHHHHHh--
Confidence            3345668999999999999999999999999999988888654433221  111 12368889999999988887665  


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC----------
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP----------  153 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~----------  153 (255)
                           ++|++||+|+...    ...  .+.+...+++|+.++.++++++.+.. ..+++|++||...+..          
T Consensus        80 -----~~d~vih~A~~~~----~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~~~~~~~~~  147 (338)
T PLN00198         80 -----GCDLVFHVATPVN----FAS--EDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINKLSGTGLVM  147 (338)
T ss_pred             -----cCCEEEEeCCCCc----cCC--CChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccCCCCCCcee
Confidence                 6899999998532    111  12245678999999999999987653 2359999999765421          


Q ss_pred             --------------CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC-hhHHHHHHhh-----
Q 025273          154 --------------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN-DGVRQTIEQN-----  213 (255)
Q Consensus       154 --------------~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~-----  213 (255)
                                    .++..+|+.||.+.+.+++.++.++  ++++..+.|+.+..|-....... -.........     
T Consensus       148 ~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~  225 (338)
T PLN00198        148 NEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN--NIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLI  225 (338)
T ss_pred             ccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc--CceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCcccc
Confidence                          1235579999999999999988776  78999999999988753211111 0010111110     


Q ss_pred             -----cc----cCCCCCHHHHHHHHHHhcCCC
Q 025273          214 -----TL----LNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       214 -----~~----~~~~~~~~d~a~~~~~l~s~~  236 (255)
                           .+    ...+..++|++++++.++...
T Consensus       226 ~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~  257 (338)
T PLN00198        226 NGLKGMQMLSGSISITHVEDVCRAHIFLAEKE  257 (338)
T ss_pred             ccccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence                 00    135788999999998888654

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.89  E-value=1.8e-21  Score=170.64  Aligned_cols=229  Identities=13%  Similarity=0.078  Sum_probs=159.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-----------------HHHHHHHHH-hcCCeEEEEEec
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-----------------VDEAVVKLK-ARGIEVIGVVCH   69 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-----------------~~~~~~~~~-~~~~~~~~~~~D   69 (255)
                      ..+++|+||||||+|+||++++++|+++|++|++++|....                 .+.+ +.+. ..+.++.++.+|
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~v~~v~~D  121 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERV-RRWKEVSGKEIELYVGD  121 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHH-HHHHHhhCCcceEEECC
Confidence            45788999999999999999999999999999998753210                 0111 1111 113468899999


Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           70 VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        70 v~~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      +++.+.+++++++.     ++|.|||+|+...  ......++++++..+++|+.|++++++++..... ..++|++||..
T Consensus       122 l~d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv-~~~~V~~SS~~  193 (442)
T PLN02572        122 ICDFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP-DCHLVKLGTMG  193 (442)
T ss_pred             CCCHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEecce
Confidence            99999999988864     6999999997643  3334455666788899999999999998876432 13899999876


Q ss_pred             ccC------------------------CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC---
Q 025273          150 GYQ------------------------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS---  202 (255)
Q Consensus       150 ~~~------------------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~---  202 (255)
                      .+.                        +..+...|+.+|.+.+.+++.++..+  ++.+..+.|+.+..|.......   
T Consensus       194 vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~--gl~~v~lR~~~vyGp~~~~~~~~~~  271 (442)
T PLN02572        194 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVRTDETMMDEE  271 (442)
T ss_pred             ecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc--CCCEEEEecccccCCCCcccccccc
Confidence            542                        12234689999999999999887776  7899999999988875422100   


Q ss_pred             -------C---hhH----HHHHHhhc---------ccCCCCCHHHHHHHHHHhcCCCCCCccc--cEEEeCC
Q 025273          203 -------N---DGV----RQTIEQNT---------LLNRLGTTRDMAAAAAFLASDDASYITG--ETLVVAG  249 (255)
Q Consensus       203 -------~---~~~----~~~~~~~~---------~~~~~~~~~d~a~~~~~l~s~~~~~~~G--~~i~~dg  249 (255)
                             .   ...    ........         ..+.+...+|++.+++.++....  ..|  +++++.+
T Consensus       272 li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~i~Nigs  341 (442)
T PLN02572        272 LINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFRVFNQFT  341 (442)
T ss_pred             cccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCceeEEEeCC
Confidence                   0   011    11111111         12256789999999988886432  134  4677754

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.89  E-value=3.7e-22  Score=155.45  Aligned_cols=191  Identities=24%  Similarity=0.300  Sum_probs=162.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcC-----CeEEEEeCCchhHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEG-----ASVVVSSRKQKNVDEAVVKLKARG----IEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |++||||++||||.++++.|++..     .++++++|+.++++.++..+.+..    .++.++++|+++..++.++.+++
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            789999999999999999999763     358889999999999998887653    47899999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCC--------------------------CccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc
Q 025273           84 IEKFGKIDVVVSNAAANPSVD--------------------------SILQTKESVLDKLWDINVKSSILLLQDAAPHLQ  137 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~--------------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  137 (255)
                      ..+|+++|.++.|||...-.+                          .....+.+++..+++.|++|+|.+.+.+.|++-
T Consensus        84 ~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~  163 (341)
T KOG1478|consen   84 KQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLC  163 (341)
T ss_pred             HHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhh
Confidence            999999999999999864211                          123456678889999999999999999999874


Q ss_pred             --CCCeEEEEcccCccCC---------CCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC
Q 025273          138 --KGSSVVLISSIAGYQP---------QSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN  203 (255)
Q Consensus       138 --~~~~iv~iss~~~~~~---------~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~  203 (255)
                        +...+|++||..+...         ..+..+|..||.+..-+.-++-+.+.+ |+....++||..-|++...+...
T Consensus       164 ~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~~  241 (341)
T KOG1478|consen  164 HSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLNP  241 (341)
T ss_pred             cCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhhh
Confidence              4458999999987533         356778999999999999888888888 99999999999999887666543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.89  E-value=9.8e-21  Score=162.02  Aligned_cols=213  Identities=19%  Similarity=0.088  Sum_probs=153.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .++++||||||+|+||++++++|+++|++|++++|+.+..+.+...+.. +.++.++.+|+++.+++.++++       .
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-------G   79 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------C
Confidence            5688999999999999999999999999999999987665554444332 4578889999999998887764       5


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHH--HHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC-------------
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVL--DKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-------------  154 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-------------  154 (255)
                      +|.+||+|+...........+++.+  .++++.|+.++.++++++.+.. ..+++|++||...+...             
T Consensus        80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~  158 (353)
T PLN02896         80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKDSNGRWRAVVDET  158 (353)
T ss_pred             CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccccCCCCCCccCcc
Confidence            8999999997542211122233333  5678888999999999987653 23589999997654210             


Q ss_pred             ------------CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHH----h-hcc--
Q 025273          155 ------------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIE----Q-NTL--  215 (255)
Q Consensus       155 ------------~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~----~-~~~--  215 (255)
                                  ++..+|+.||.+.+.+++.++.++  ++++..+.|+.+..|......+  .......    . ...  
T Consensus       159 ~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyGp~~~~~~~--~~~~~~~~~~~g~~~~~~  234 (353)
T PLN02896        159 CQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN--GIDLVSVITTTVAGPFLTPSVP--SSIQVLLSPITGDSKLFS  234 (353)
T ss_pred             cCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCcCCCCC--chHHHHHHHhcCCccccc
Confidence                        112379999999999999988776  7899999999988875432111  1111111    0 000  


Q ss_pred             ----------cCCCCCHHHHHHHHHHhcCC
Q 025273          216 ----------LNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       216 ----------~~~~~~~~d~a~~~~~l~s~  235 (255)
                                ...+..++|++++++.++..
T Consensus       235 ~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        235 ILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             cccccccccCceeEEeHHHHHHHHHHHHhC
Confidence                      12467899999999888854

>PLN02650 dihydroflavonol-4-reductase

Probab=99.89  E-value=7e-21  Score=162.80  Aligned_cols=209  Identities=18%  Similarity=0.097  Sum_probs=151.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ..|++|||||+|+||++++++|+++|++|++++|+.+..+.........  ..++.++.+|+++.+.++++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            3688999999999999999999999999999999876655443322211  2368889999999998887765       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC--------------
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ--------------  154 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~--------------  154 (255)
                      .+|.+||+|+....    ...+  ..++.+++|+.+++++++++.+... .++||++||...+.+.              
T Consensus        77 ~~d~ViH~A~~~~~----~~~~--~~~~~~~~Nv~gt~~ll~aa~~~~~-~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~  149 (351)
T PLN02650         77 GCTGVFHVATPMDF----ESKD--PENEVIKPTVNGMLSIMKACAKAKT-VRRIVFTSSAGTVNVEEHQKPVYDEDCWSD  149 (351)
T ss_pred             CCCEEEEeCCCCCC----CCCC--chhhhhhHHHHHHHHHHHHHHhcCC-ceEEEEecchhhcccCCCCCCccCcccCCc
Confidence            58999999986431    1111  2356789999999999999987542 2489999987532110              


Q ss_pred             --------CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHH---hh------cccC
Q 025273          155 --------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIE---QN------TLLN  217 (255)
Q Consensus       155 --------~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~---~~------~~~~  217 (255)
                              .+..+|+.||.+.+.+++.++.++  +++++.+.|+.+.+|........ .+.....   ..      ...+
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilRp~~v~Gp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r  226 (351)
T PLN02650        150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN--GLDFISIIPTLVVGPFISTSMPP-SLITALSLITGNEAHYSIIKQG  226 (351)
T ss_pred             hhhhhccccccchHHHHHHHHHHHHHHHHHHc--CCeEEEECCCceECCCCCCCCCc-cHHHHHHHhcCCccccCcCCCc
Confidence                    012379999999999999998876  78999999999999865432211 1111110   00      1124


Q ss_pred             CCCCHHHHHHHHHHhcCCC
Q 025273          218 RLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       218 ~~~~~~d~a~~~~~l~s~~  236 (255)
                      .++.++|++++++.++...
T Consensus       227 ~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        227 QFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             ceeeHHHHHHHHHHHhcCc
Confidence            6789999999999988654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.89  E-value=1.4e-21  Score=166.64  Aligned_cols=225  Identities=16%  Similarity=0.108  Sum_probs=150.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-----HHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-----VDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.+.... .+.++.++++|+++.+++.++++.+   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999998642     1111111111 1346889999999999999888865   


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhc-ccCCCeEEEEcccCccC-----------CC
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH-LQKGSSVVLISSIAGYQ-----------PQ  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~iv~iss~~~~~-----------~~  154 (255)
                        ++|.+||+|+......     ..+.-...+++|+.|+.++++++.+. +++..++|++||...+.           +.
T Consensus        78 --~~d~ViH~Aa~~~~~~-----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  150 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVKV-----SFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPF  150 (343)
T ss_pred             --CCCEEEECCcccccch-----hhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCC
Confidence              6899999999754211     12223456789999999999999874 33334899999965432           23


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCCC----eeEEEEeCCcccCCccccccCChhHHHHH----------HhhcccCCCC
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAPD----TRVNCVAPGFVPTHFAEYITSNDGVRQTI----------EQNTLLNRLG  220 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~~----v~v~~v~pg~v~t~~~~~~~~~~~~~~~~----------~~~~~~~~~~  220 (255)
                      .+...|+.||.+.+.+++.++.+++-.    +.++...|+.-.+-....+   .......          ........+.
T Consensus       151 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~g~~~rd~i  227 (343)
T TIGR01472       151 YPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKI---TRAAAKIKLGLQEKLYLGNLDAKRDWG  227 (343)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHH---HHHHHHHHcCCCCceeeCCCccccCce
Confidence            356789999999999999998876321    2233444542111000000   0011111          1112234567


Q ss_pred             CHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          221 TTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       221 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ..+|++++++.++....    +..+++.+|...+
T Consensus       228 ~V~D~a~a~~~~~~~~~----~~~yni~~g~~~s  257 (343)
T TIGR01472       228 HAKDYVEAMWLMLQQDK----PDDYVIATGETHS  257 (343)
T ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCCcee
Confidence            89999999988875432    3468998887654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK06720 hypothetical protein; Provisional

Probab=99.89  E-value=1.9e-21  Score=148.61  Aligned_cols=140  Identities=21%  Similarity=0.270  Sum_probs=116.7

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +.+++|+++||||++|||+++++.|+++|++|++++|+.+.++...+++...+.+..++++|+++.++++++++++.+.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999888777777776556678889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---------CCCeEEEEcccCc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---------KGSSVVLISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---------~~~~iv~iss~~~  150 (255)
                      |++|++|||||......++++.+.++ ++  .+|+.+.+..++.+.+++.         +.|++..+||.++
T Consensus        92 G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         92 SRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             CCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            99999999999876556666655555 44  6677777888888887764         3568888887654

>PLN02583 cinnamoyl-CoA reductase

Probab=99.88  E-value=1e-20  Score=158.18  Aligned_cols=218  Identities=14%  Similarity=0.041  Sum_probs=151.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh--HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN--VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      -++|+||||||+|+||++++++|+++|++|+++.|+.+.  .......+...+.++.++++|+++.+++.+++.      
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~------   77 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK------   77 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc------
Confidence            357899999999999999999999999999999986432  222222222223468889999999998876654      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC---C---------
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ---S---------  155 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~---~---------  155 (255)
                       ..|.++|.++...      +.+ .++++++++|+.|++++++++.+.+. .++||++||..+....   .         
T Consensus        78 -~~d~v~~~~~~~~------~~~-~~~~~~~~~nv~gt~~ll~aa~~~~~-v~riV~~SS~~a~~~~~~~~~~~~~~~E~  148 (297)
T PLN02583         78 -GCSGLFCCFDPPS------DYP-SYDEKMVDVEVRAAHNVLEACAQTDT-IEKVVFTSSLTAVIWRDDNISTQKDVDER  148 (297)
T ss_pred             -CCCEEEEeCccCC------ccc-ccHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEecchHheecccccCCCCCCCCcc
Confidence             6899998765422      111 23678999999999999999987652 3599999998653210   0         


Q ss_pred             -C---------ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhh--cccCCCCCHH
Q 025273          156 -S---------MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN--TLLNRLGTTR  223 (255)
Q Consensus       156 -~---------~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  223 (255)
                       +         ...|+.||...+.+++.++++.  +++++.|+|+.+.+|.......   ........  .....+++.+
T Consensus       149 ~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~--gi~~v~lrp~~v~Gp~~~~~~~---~~~~~~~~~~~~~~~~v~V~  223 (297)
T PLN02583        149 SWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR--GVNMVSINAGLLMGPSLTQHNP---YLKGAAQMYENGVLVTVDVN  223 (297)
T ss_pred             cCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh--CCcEEEEcCCcccCCCCCCchh---hhcCCcccCcccCcceEEHH
Confidence             0         0169999999999998887665  7999999999998875432110   00000000  0112367899


Q ss_pred             HHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          224 DMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       224 d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      |+|++++..+....  ..| .+.+.++
T Consensus       224 Dva~a~~~al~~~~--~~~-r~~~~~~  247 (297)
T PLN02583        224 FLVDAHIRAFEDVS--SYG-RYLCFNH  247 (297)
T ss_pred             HHHHHHHHHhcCcc--cCC-cEEEecC
Confidence            99999998886443  234 4555544

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.88  E-value=1.5e-20  Score=160.50  Aligned_cols=231  Identities=14%  Similarity=0.026  Sum_probs=160.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh----c-CCeEEEEEecCCCHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA----R-GIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~-~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      ..+++|+||||||+|.||++++++|+++|++|++++|..............    . ..++.++.+|+++.+.+.++++ 
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-   89 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-   89 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence            457789999999999999999999999999999999865432222222111    1 2367889999999888877765 


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC---------
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP---------  153 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~---------  153 (255)
                            .+|.+||.|+......     ..++....+++|+.|+.++++++...  ...++|++||...+..         
T Consensus        90 ------~~d~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~e~  156 (348)
T PRK15181         90 ------NVDYVLHQAALGSVPR-----SLKDPIATNSANIDGFLNMLTAARDA--HVSSFTYAASSSTYGDHPDLPKIEE  156 (348)
T ss_pred             ------CCCEEEECccccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeechHhhCCCCCCCCCCC
Confidence                  5899999999754211     11223457899999999999988654  2348999998754421         


Q ss_pred             --CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc--C--ChhHHHHHHhhc---------ccCC
Q 025273          154 --QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT--S--NDGVRQTIEQNT---------LLNR  218 (255)
Q Consensus       154 --~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~--~--~~~~~~~~~~~~---------~~~~  218 (255)
                        ..+...|+.+|.+.+.+++.++.++  ++++..+.|+.+..|......  .  -+.+........         ..+.
T Consensus       157 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd  234 (348)
T PRK15181        157 RIGRPLSPYAVTKYVNELYADVFARSY--EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRD  234 (348)
T ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHh--CCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEe
Confidence              1245689999999999999887765  788999999988877532110  0  012222211111         1123


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          219 LGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       219 ~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ++..+|++++++..+........|+++++.+|...+
T Consensus       235 ~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s  270 (348)
T PRK15181        235 FCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTS  270 (348)
T ss_pred             eEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEe
Confidence            567899999988766433222357899998887654

>PLN02214 cinnamoyl-CoA reductase

Probab=99.87  E-value=5.5e-20  Score=156.67  Aligned_cols=217  Identities=18%  Similarity=0.130  Sum_probs=153.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH-HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA-VVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+..... ...+.....++.++.+|+++.++++++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            6789999999999999999999999999999999986543221 22222223468889999999998888775       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC--CC------------
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--PQ------------  154 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~--~~------------  154 (255)
                      .+|++||+|+...          +++++.+++|+.++.++++++.+..  .+++|++||..+..  +.            
T Consensus        81 ~~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~~~~--v~r~V~~SS~~avyg~~~~~~~~~~~E~~~  148 (342)
T PLN02214         81 GCDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAAEAK--VKRVVITSSIGAVYMDPNRDPEAVVDESCW  148 (342)
T ss_pred             cCCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeccceeeeccCCCCCCcccCcccC
Confidence            6899999998642          1256789999999999999987642  34899999964321  10            


Q ss_pred             -------CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC--hhHHHHHHhh-----cccCCCC
Q 025273          155 -------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN--DGVRQTIEQN-----TLLNRLG  220 (255)
Q Consensus       155 -------~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~-----~~~~~~~  220 (255)
                             .+...|+.+|.+.+.+++.++.++  ++++..+.|+.+..|........  ..+.......     .....+.
T Consensus       149 ~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~--g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i  226 (342)
T PLN02214        149 SDLDFCKNTKNWYCYGKMVAEQAAWETAKEK--GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYV  226 (342)
T ss_pred             CChhhccccccHHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCee
Confidence                   123479999999999999888876  78999999999988754321110  0111111111     0123467


Q ss_pred             CHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          221 TTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       221 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ..+|++++++.++....   .|..+++.++
T Consensus       227 ~V~Dva~a~~~al~~~~---~~g~yn~~~~  253 (342)
T PLN02214        227 DVRDVALAHVLVYEAPS---ASGRYLLAES  253 (342)
T ss_pred             EHHHHHHHHHHHHhCcc---cCCcEEEecC
Confidence            89999999998886542   2335666543

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.87  E-value=4e-20  Score=155.57  Aligned_cols=222  Identities=17%  Similarity=0.080  Sum_probs=155.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCch--hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++|||||+|+||++++++|+++|  ++|++++|...  ..+.. +.+. ...++.++.+|+++++++.++++..     +
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENL-ADLE-DNPRYRFVKGDIGDRELVSRLFTEH-----Q   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhh-hhhc-cCCCcEEEEcCCcCHHHHHHHHhhc-----C
Confidence            48999999999999999999987  77988876432  11111 1121 1236778899999999998888753     5


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC------------CCCCC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------PQSSM  157 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------------~~~~~  157 (255)
                      +|++||+|+....     +.+.+..+..+++|+.++.++++++.+.+. ..+++++||...+.            +..+.
T Consensus        74 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~  147 (317)
T TIGR01181        74 PDAVVHFAAESHV-----DRSISGPAAFIETNVVGTYTLLEAVRKYWH-EFRFHHISTDEVYGDLEKGDAFTETTPLAPS  147 (317)
T ss_pred             CCEEEEcccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEeeccceeCCCCCCCCcCCCCCCCCC
Confidence            9999999996531     123345667899999999999998877643 24799999854322            12245


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcc---------cCCCCCHHHHHHH
Q 025273          158 AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL---------LNRLGTTRDMAAA  228 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d~a~~  228 (255)
                      ..|+.+|.+.+.+++.++.+.  ++++..+.|+.+..+......-.+..........+         ...+...+|++++
T Consensus       148 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~  225 (317)
T TIGR01181       148 SPYSASKAASDHLVRAYHRTY--GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRA  225 (317)
T ss_pred             CchHHHHHHHHHHHHHHHHHh--CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHH
Confidence            579999999999999988876  67888999998877643211001111122221111         1135578999999


Q ss_pred             HHHhcCCCCCCccccEEEeCCCccc
Q 025273          229 AAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       229 ~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +..++...   ..|+++++.++...
T Consensus       226 ~~~~~~~~---~~~~~~~~~~~~~~  247 (317)
T TIGR01181       226 IYLVLEKG---RVGETYNIGGGNER  247 (317)
T ss_pred             HHHHHcCC---CCCceEEeCCCCce
Confidence            99888643   35788999887654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.87  E-value=3.5e-20  Score=160.10  Aligned_cols=226  Identities=19%  Similarity=0.197  Sum_probs=177.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++||+||||||+|.||+++++++++.+.+ +++.+|++...-....++...  ..+..++.+|+.|.+.++.++++.  
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~--  324 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH--  324 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence            478999999999999999999999999865 999999999988888888875  468899999999999999998865  


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                         ++|+++|.|++-+ .+..    +....+.+..|++|+.++.+++...-.  .++|.+|+--+.+|   .+.||++|.
T Consensus       325 ---kvd~VfHAAA~KH-VPl~----E~nP~Eai~tNV~GT~nv~~aa~~~~V--~~~V~iSTDKAV~P---tNvmGaTKr  391 (588)
T COG1086         325 ---KVDIVFHAAALKH-VPLV----EYNPEEAIKTNVLGTENVAEAAIKNGV--KKFVLISTDKAVNP---TNVMGATKR  391 (588)
T ss_pred             ---CCceEEEhhhhcc-Ccch----hcCHHHHHHHhhHhHHHHHHHHHHhCC--CEEEEEecCcccCC---chHhhHHHH
Confidence               7999999999854 2322    223556789999999999999987643  48999999776554   688999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhc--------ccCCCCCHHHHHHHHHHhcCCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT--------LLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ..+.++++++.+... +-++.++.=|-|-..-.+-.+-   +.++..+..        -.+.+++.+|.++.++....-.
T Consensus       392 ~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPl---Fk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~  468 (588)
T COG1086         392 LAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPL---FKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIA  468 (588)
T ss_pred             HHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHH---HHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhc
Confidence            999999999987665 6888888888776543322211   112222221        2344677888888887766443


Q ss_pred             CCCccccEEEeCCCcccCC
Q 025273          237 ASYITGETLVVAGGMPSRL  255 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~~~  255 (255)
                         -.|+++..|.|.+.+|
T Consensus       469 ---~gGeifvldMGepvkI  484 (588)
T COG1086         469 ---KGGEIFVLDMGEPVKI  484 (588)
T ss_pred             ---CCCcEEEEcCCCCeEH
Confidence               4699999999988764

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.86  E-value=1.4e-19  Score=148.56  Aligned_cols=222  Identities=19%  Similarity=0.118  Sum_probs=164.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHH--HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE--AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++|+||||+|.||++++++|+++|++|+.+-|+++..+.  ...++.....+++.+..|++++++++++++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            68999999999999999999999999999999999987554  355555556689999999999999999988       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC-C------------
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-S------------  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-~------------  155 (255)
                      ..|.++|.|......    ..++  -.+.++..+.|+.++++++...- .-.|||++||.++..+. +            
T Consensus        78 gcdgVfH~Asp~~~~----~~~~--e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~  150 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFD----LEDP--EKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYNGPNIGENSVVDEES  150 (327)
T ss_pred             CCCEEEEeCccCCCC----CCCc--HHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccCCcCCCCCccccccc
Confidence            789999999875421    1111  23678999999999999998653 23499999999876432 1            


Q ss_pred             ---------CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChh--HHHHHHhhc-----ccCCC
Q 025273          156 ---------SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDG--VRQTIEQNT-----LLNRL  219 (255)
Q Consensus       156 ---------~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~-----~~~~~  219 (255)
                               ....|..||.--|.-+..++.|-  ++....|+|+.|-.|..........  ....+....     ....+
T Consensus       151 wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~--~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~  228 (327)
T KOG1502|consen  151 WSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN--GLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAF  228 (327)
T ss_pred             CCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC--CccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceee
Confidence                     01258888888787777777775  7899999999999887765222111  111111100     11236


Q ss_pred             CCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          220 GTTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       220 ~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ++.+|+|.+.+++++.+..  .|+.|-+...
T Consensus       229 VdVrDVA~AHv~a~E~~~a--~GRyic~~~~  257 (327)
T KOG1502|consen  229 VDVRDVALAHVLALEKPSA--KGRYICVGEV  257 (327)
T ss_pred             EeHHHHHHHHHHHHcCccc--CceEEEecCc
Confidence            7899999999999977654  4776655543

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=9.3e-20  Score=154.00  Aligned_cols=219  Identities=18%  Similarity=0.146  Sum_probs=152.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHH--hcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK--ARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++|++|||||+|+||++++++|+++|++|++++|+............  ....++.++++|+++.++++++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            47899999999999999999999999999999998654332222111  113478889999999988877765       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc--cCCC---C--------
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--YQPQ---S--------  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~--~~~~---~--------  155 (255)
                      ++|.+||+|+....  ..  ..+  .+..+++|+.++.++++++.... ...++|++||.++  +.+.   +        
T Consensus        76 ~~d~Vih~A~~~~~--~~--~~~--~~~~~~~nv~gt~~ll~a~~~~~-~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~  148 (322)
T PLN02662         76 GCEGVFHTASPFYH--DV--TDP--QAELIDPAVKGTLNVLRSCAKVP-SVKRVVVTSSMAAVAYNGKPLTPDVVVDETW  148 (322)
T ss_pred             CCCEEEEeCCcccC--CC--CCh--HHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEccCHHHhcCCCcCCCCCCcCCccc
Confidence            68999999986431  11  111  24678999999999999987643 2348999999753  2110   0        


Q ss_pred             ---C------ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC-ChhHHHHHHhh-----cccCCCC
Q 025273          156 ---S------MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS-NDGVRQTIEQN-----TLLNRLG  220 (255)
Q Consensus       156 ---~------~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~-----~~~~~~~  220 (255)
                         +      ...|+.+|...+.+++.+..++  ++++..++|+.+.+|....... ...........     .....++
T Consensus       149 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (322)
T PLN02662        149 FSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN--GIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWV  226 (322)
T ss_pred             CCChhHhhcccchHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeE
Confidence               1      1479999999999998887766  7899999999999986432211 11111111111     1123467


Q ss_pred             CHHHHHHHHHHhcCCCCCCccccEEEeC
Q 025273          221 TTRDMAAAAAFLASDDASYITGETLVVA  248 (255)
Q Consensus       221 ~~~d~a~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      .++|++++++.++.....  .|. +++.
T Consensus       227 ~v~Dva~a~~~~~~~~~~--~~~-~~~~  251 (322)
T PLN02662        227 DVRDVANAHIQAFEIPSA--SGR-YCLV  251 (322)
T ss_pred             EHHHHHHHHHHHhcCcCc--CCc-EEEe
Confidence            899999999888865422  344 4553

>PLN02240 UDP-glucose 4-epimerase

Probab=99.86  E-value=1.4e-19  Score=154.78  Aligned_cols=232  Identities=19%  Similarity=0.158  Sum_probs=153.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHH----hcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK----ARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +++|++|||||+|+||++++++|+++|++|++++|...........+.    ..+.++.++.+|+++.++++.+++..  
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--   80 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST--   80 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC--
Confidence            357999999999999999999999999999999876433222111221    12346788999999999998887753  


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------CC
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQ  154 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~  154 (255)
                         .+|.+||+|+.....     .+.+.+.+.+++|+.++.++++++...  +.+++|++||...+.           +.
T Consensus        81 ---~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~E~~~~  150 (352)
T PLN02240         81 ---RFDAVIHFAGLKAVG-----ESVAKPLLYYDNNLVGTINLLEVMAKH--GCKKLVFSSSATVYGQPEEVPCTEEFPL  150 (352)
T ss_pred             ---CCCEEEEccccCCcc-----ccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHHhCCCCCCCCCCCCCC
Confidence               799999999964311     123456788999999999999876542  235899999965432           22


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc------CChh---HHHHHHhh------------
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT------SNDG---VRQTIEQN------------  213 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~------~~~~---~~~~~~~~------------  213 (255)
                      .+...|+.+|.+.+.+++.++.+. .++++..+.|+.+..+......      ....   ........            
T Consensus       151 ~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  229 (352)
T PLN02240        151 SATNPYGRTKLFIEEICRDIHASD-PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDY  229 (352)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCC
Confidence            346789999999999999887652 2456666665444332110000      0000   11111110            


Q ss_pred             -----cccCCCCCHHHHHHHHHHhcCCC--CCCccccEEEeCCCcccC
Q 025273          214 -----TLLNRLGTTRDMAAAAAFLASDD--ASYITGETLVVAGGMPSR  254 (255)
Q Consensus       214 -----~~~~~~~~~~d~a~~~~~l~s~~--~~~~~G~~i~~dgG~~~~  254 (255)
                           .....++.++|++++++.++...  .....|+.+++.+|...+
T Consensus       230 ~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s  277 (352)
T PLN02240        230 PTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTS  277 (352)
T ss_pred             CCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEe
Confidence                 01123567899999887766431  112356899998887654

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.86  E-value=7.3e-20  Score=156.56  Aligned_cols=223  Identities=14%  Similarity=0.054  Sum_probs=151.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCch--hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++|||||+|+||++++++|+++|+. |+.+++...  ..+... .+. .+.++.++.+|+++.+++++++++.     ++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            6999999999999999999999977 555665421  112211 111 1346778899999999999888753     79


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-------CCCeEEEEcccCccC-----------
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-------KGSSVVLISSIAGYQ-----------  152 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-------~~~~iv~iss~~~~~-----------  152 (255)
                      |++||+|+......     .....++.+++|+.|+.++++++.+.|+       ...++|++||...+.           
T Consensus        75 d~vih~A~~~~~~~-----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         75 DAVMHLAAESHVDR-----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             CEEEECCcccCCcc-----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            99999999753211     1123466899999999999999987653       124899999864332           


Q ss_pred             ----------CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhc--------
Q 025273          153 ----------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT--------  214 (255)
Q Consensus       153 ----------~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--------  214 (255)
                                +..+...|+.+|.+.+.+++.++.++  ++++..+.|+.+..|.......-..+........        
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g  227 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY--GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCC
Confidence                      12345689999999999999998887  4566667777766654210000011111111111        


Q ss_pred             -ccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          215 -LLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       215 -~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                       ....+..++|++.++..++...   ..|+.+++.++...
T Consensus       228 ~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~  264 (352)
T PRK10084        228 DQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEK  264 (352)
T ss_pred             CeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcC
Confidence             1223678899999998887543   24788999887654

>PLN02686 cinnamoyl-CoA reductase

Probab=99.85  E-value=2.7e-19  Score=153.69  Aligned_cols=228  Identities=12%  Similarity=0.097  Sum_probs=152.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      .+.++|+||||||+|+||++++++|+++|++|+++.|+.+..+.+. ++...      ...+.++++|+++.+++.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            3467899999999999999999999999999999888876554442 22111      1357889999999999888876


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc--c-----C--
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--Y-----Q--  152 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~--~-----~--  152 (255)
                             .+|.++|.++....... ...    .....++|+.++.++++++...- .-.++|++||..+  +     .  
T Consensus       128 -------~~d~V~hlA~~~~~~~~-~~~----~~~~~~~nv~gt~~llea~~~~~-~v~r~V~~SS~~~~vyg~~~~~~~  194 (367)
T PLN02686        128 -------GCAGVFHTSAFVDPAGL-SGY----TKSMAELEAKASENVIEACVRTE-SVRKCVFTSSLLACVWRQNYPHDL  194 (367)
T ss_pred             -------hccEEEecCeeeccccc-ccc----cchhhhhhHHHHHHHHHHHHhcC-CccEEEEeccHHHhcccccCCCCC
Confidence                   47899999987542211 011    12345789999999999876531 2238999999631  1     0  


Q ss_pred             C--------------CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhc-c--
Q 025273          153 P--------------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT-L--  215 (255)
Q Consensus       153 ~--------------~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~--  215 (255)
                      +              ..+...|+.+|.+.+.+++.++.+.  +++++.++|+.+.+|....... ........... .  
T Consensus       195 ~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--gl~~v~lRp~~vyGp~~~~~~~-~~~~~~~~g~~~~~g  271 (367)
T PLN02686        195 PPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGK--GLKLATICPALVTGPGFFRRNS-TATIAYLKGAQEMLA  271 (367)
T ss_pred             CcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhc--CceEEEEcCCceECCCCCCCCC-hhHHHHhcCCCccCC
Confidence            0              0123469999999999999888775  7999999999999985421111 11111111110 1  


Q ss_pred             --cCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          216 --LNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       216 --~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                        ...+...+|++++++.++........|+.+ +.+|...
T Consensus       272 ~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~  310 (367)
T PLN02686        272 DGLLATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVV  310 (367)
T ss_pred             CCCcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCc
Confidence              113678999999998887532111234555 4444443

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.85  E-value=1.7e-20  Score=152.52  Aligned_cols=220  Identities=20%  Similarity=0.212  Sum_probs=150.0

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc--C--C--eEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           15 AIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR--G--I--EVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~--~--~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ||||||+|.||++++++|++.+. ++++++|++..+-.+..++...  .  .  .+.++.+|++|.+.++.++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999985 5999999999999988888532  2  2  2345678999999999998765    


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                       ++|+++|.|++-. .+. .+.   ...+.+++|+.|+.++++++..+-.  .++|++|+--+..   +.+.||++|.-.
T Consensus        77 -~pdiVfHaAA~Kh-Vpl-~E~---~p~eav~tNv~GT~nv~~aa~~~~v--~~~v~ISTDKAv~---PtnvmGatKrla  145 (293)
T PF02719_consen   77 -KPDIVFHAAALKH-VPL-MED---NPFEAVKTNVLGTQNVAEAAIEHGV--ERFVFISTDKAVN---PTNVMGATKRLA  145 (293)
T ss_dssp             -T-SEEEE-------HHH-HCC---CHHHHHHHHCHHHHHHHHHHHHTT---SEEEEEEECGCSS-----SHHHHHHHHH
T ss_pred             -CCCEEEEChhcCC-CCh-HHh---CHHHHHHHHHHHHHHHHHHHHHcCC--CEEEEccccccCC---CCcHHHHHHHHH
Confidence             8999999999754 222 222   2456789999999999999988643  4999999987655   468999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcc--------cCCCCCHHHHHHHHHHhcCCCCC
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL--------LNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      |.++.+++..... +.++.+|.=|.|...-.+-+   +-+..+..+..|        .+.+++++|.++.++..+.-.  
T Consensus       146 E~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVi---p~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~--  220 (293)
T PF02719_consen  146 EKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVI---PLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALA--  220 (293)
T ss_dssp             HHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCH---HHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH---
T ss_pred             HHHHHHHhhhCCCCCcEEEEEEecceecCCCcHH---HHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhC--
Confidence            9999998888755 78888888887755322211   222233333322        234678999999887666433  


Q ss_pred             CccccEEEeCCCcccCC
Q 025273          239 YITGETLVVAGGMPSRL  255 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~~  255 (255)
                       ..|+++..|.|.+.+|
T Consensus       221 -~~geifvl~mg~~v~I  236 (293)
T PF02719_consen  221 -KGGEIFVLDMGEPVKI  236 (293)
T ss_dssp             --TTEEEEE---TCEEC
T ss_pred             -CCCcEEEecCCCCcCH
Confidence             3599999999988765

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.85  E-value=4.7e-19  Score=150.71  Aligned_cols=229  Identities=14%  Similarity=0.082  Sum_probs=150.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +++|||||+|+||++++++|+++|++|++++|...........+... +.++.++.+|+++.+++.++++.     .++|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAID   75 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence            36999999999999999999999999999887543323222222221 34577789999999998888763     2699


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------C-CCChh
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------Q-SSMAM  159 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~-~~~~~  159 (255)
                      .+||+|+......     ..+.....+++|+.++.++++++...  ..+++|++||...+..           . .+...
T Consensus        76 ~vvh~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~  148 (338)
T PRK10675         76 TVIHFAGLKAVGE-----SVQKPLEYYDNNVNGTLRLISAMRAA--NVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSP  148 (338)
T ss_pred             EEEECCccccccc-----hhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhhCCCCCCccccccCCCCCCCh
Confidence            9999998753211     12234567899999999998877653  2358999999754321           1 34678


Q ss_pred             hHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC------Chh---HHHHHHh-h----------------
Q 025273          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS------NDG---VRQTIEQ-N----------------  213 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~------~~~---~~~~~~~-~----------------  213 (255)
                      |+.+|.+.+.+++.++++.. ++++..+.|+.+..+.......      ...   ....... .                
T Consensus       149 Y~~sK~~~E~~~~~~~~~~~-~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  227 (338)
T PRK10675        149 YGKSKLMVEQILTDLQKAQP-DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG  227 (338)
T ss_pred             hHHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCC
Confidence            99999999999999876643 3555555554444332110000      000   1111111 0                


Q ss_pred             cccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          214 TLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       214 ~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      .....++..+|++++++.++........|+++++.+|...+
T Consensus       228 ~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s  268 (338)
T PRK10675        228 TGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSS  268 (338)
T ss_pred             cEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCcee
Confidence            01123678899999888777542222346899998887654

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.84  E-value=5.9e-19  Score=140.99  Aligned_cols=223  Identities=16%  Similarity=0.060  Sum_probs=159.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchh--HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKN--VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|||||.|+||+++++++.++..  +|+.+|.-.-.  .+.+ +.+ ...+++.|++.|+.|.+.+.+++++.     
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~-~~~~~~~fv~~DI~D~~~v~~~~~~~-----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADV-EDSPRYRFVQGDICDRELVDRLFKEY-----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhh-hcCCCceEEeccccCHHHHHHHHHhc-----
Confidence            5799999999999999999998854  47777654322  1222 112 23569999999999999999998865     


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-------------CCCC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-------------QPQS  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-------------~~~~  155 (255)
                      .+|+++|-|+-+.     -+.+..+-...+++|+.|++++++++..+..+ -+++.||.-..+             .|+.
T Consensus        74 ~~D~VvhfAAESH-----VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDEVYG~l~~~~~~FtE~tp~~  147 (340)
T COG1088          74 QPDAVVHFAAESH-----VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDEVYGDLGLDDDAFTETTPYN  147 (340)
T ss_pred             CCCeEEEechhcc-----ccccccChhhhhhcchHHHHHHHHHHHHhccc-ceEEEeccccccccccCCCCCcccCCCCC
Confidence            7999999999654     23444555678899999999999999887643 478888874332             4567


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhh---------cccCCCCCHHHHH
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN---------TLLNRLGTTRDMA  226 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a  226 (255)
                      +.++|++|||+-..|+|++.+.+  |+.+.-..+.--..|.+..-.--+-........         ...+.|.-.+|=+
T Consensus       148 PsSPYSASKAasD~lVray~~TY--glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~  225 (340)
T COG1088         148 PSSPYSASKAASDLLVRAYVRTY--GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHC  225 (340)
T ss_pred             CCCCcchhhhhHHHHHHHHHHHc--CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHH
Confidence            88999999999999999999999  566666666555555332111111111111111         1233466688989


Q ss_pred             HHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          227 AAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       227 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .++..++....   -||+++|.||...
T Consensus       226 ~ai~~Vl~kg~---~GE~YNIgg~~E~  249 (340)
T COG1088         226 RAIDLVLTKGK---IGETYNIGGGNER  249 (340)
T ss_pred             HHHHHHHhcCc---CCceEEeCCCccc
Confidence            98888875543   3999999999865

>PLN02427 UDP-apiose/xylose synthase

Probab=99.83  E-value=4.2e-19  Score=153.70  Aligned_cols=223  Identities=13%  Similarity=0.080  Sum_probs=151.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++.++||||||+|.||++++++|+++ |++|++++|+.+..+.+..... ....++.++.+|+++.+.++++++      
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence            55678999999999999999999998 5999999988654433221100 012468899999999988887765      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC-------------
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-------------  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-------------  154 (255)
                       .+|++||+|+..... ... ..+   .+.+..|+.++.++++++...   +.++|++||...+...             
T Consensus        86 -~~d~ViHlAa~~~~~-~~~-~~~---~~~~~~n~~gt~~ll~aa~~~---~~r~v~~SS~~vYg~~~~~~~~e~~p~~~  156 (386)
T PLN02427         86 -MADLTINLAAICTPA-DYN-TRP---LDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDHPLRQ  156 (386)
T ss_pred             -cCCEEEEcccccChh-hhh-hCh---HHHHHHHHHHHHHHHHHHHhc---CCEEEEEeeeeeeCCCcCCCCCccccccc
Confidence             589999999975421 111 111   234567999999999887543   2589999997543210             


Q ss_pred             --------------------CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC-------ChhHH
Q 025273          155 --------------------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS-------NDGVR  207 (255)
Q Consensus       155 --------------------~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~-------~~~~~  207 (255)
                                          .+...|+.+|.+.+.+++.++...  ++++..+.|+.+..+.......       ...+.
T Consensus       157 ~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i  234 (386)
T PLN02427        157 DPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL  234 (386)
T ss_pred             ccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhc--CCceEEecccceeCCCCCccccccccccccchHH
Confidence                                012369999999999998776554  7888999999998875321110       01111


Q ss_pred             ----HHHHhhcc---------cCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          208 ----QTIEQNTL---------LNRLGTTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       208 ----~~~~~~~~---------~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                          .......+         ...+...+|++++++.++.... ...|+.+++.+|
T Consensus       235 ~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~-~~~g~~yni~~~  289 (386)
T PLN02427        235 ACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA-RANGHIFNVGNP  289 (386)
T ss_pred             HHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc-cccCceEEeCCC
Confidence                11111111         1236789999999988875432 235788999876

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.82  E-value=2e-18  Score=146.04  Aligned_cols=210  Identities=19%  Similarity=0.122  Sum_probs=148.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||+|+||+++++.|+++|++|++++|+.+.....    .  ...+.++++|+++.++++++++       .+|.
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~~-------~~d~   67 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAVA-------GCRA   67 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence            4699999999999999999999999999999987653221    1  2357789999999998887765       6899


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC---------------CCC
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ---------------SSM  157 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~---------------~~~  157 (255)
                      +||+|+....       ..+..++.+++|+.++.++++++....  .+++|++||...+.+.               ...
T Consensus        68 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~  138 (328)
T TIGR03466        68 LFHVAADYRL-------WAPDPEEMYAANVEGTRNLLRAALEAG--VERVVYTSSVATLGVRGDGTPADETTPSSLDDMI  138 (328)
T ss_pred             EEEeceeccc-------CCCCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEechhhcCcCCCCCCcCccCCCCccccc
Confidence            9999985321       112356778999999999999887542  3589999997654321               013


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHH-HHhhcc-----cCCCCCHHHHHHHHHH
Q 025273          158 AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQT-IEQNTL-----LNRLGTTRDMAAAAAF  231 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~d~a~~~~~  231 (255)
                      ..|+.+|.+.+.+++.++.+.  ++++..+.|+.+..+.............. .....+     ...+...+|+++++..
T Consensus       139 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  216 (328)
T TIGR03466       139 GHYKRSKFLAEQAALEMAAEK--GLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLL  216 (328)
T ss_pred             ChHHHHHHHHHHHHHHHHHhc--CCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHH
Confidence            479999999999999887765  68889999988876543211111111111 111111     1235679999999888


Q ss_pred             hcCCCCCCccccEEEeCC
Q 025273          232 LASDDASYITGETLVVAG  249 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dg  249 (255)
                      ++...   ..|+.+++.|
T Consensus       217 ~~~~~---~~~~~~~~~~  231 (328)
T TIGR03466       217 ALERG---RIGERYILGG  231 (328)
T ss_pred             HHhCC---CCCceEEecC
Confidence            87553   2577787753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.82  E-value=5.6e-18  Score=145.25  Aligned_cols=220  Identities=19%  Similarity=0.130  Sum_probs=149.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhH---HHHHHHHHhcC--------CeEEEEEecCCCHH------
Q 025273           14 VAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNV---DEAVVKLKARG--------IEVIGVVCHVSNGQ------   74 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~---~~~~~~~~~~~--------~~~~~~~~Dv~~~~------   74 (255)
                      +||||||+|+||++++++|+++|  ++|+++.|+.+..   +++.+.+....        .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  6799999986632   23333332211        47899999998642      


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ  154 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~  154 (255)
                      ....+.       ..+|++||+|+.....        ..++..+++|+.++.++++.+....  ..+++++||...+...
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~~~--~~~~v~iSS~~v~~~~  143 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV--------YPYSELRAANVLGTREVLRLAASGR--AKPLHYVSTISVLAAI  143 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhhCC--CceEEEEccccccCCc
Confidence            222222       3799999999975421        1245677899999999998876542  3369999998765331


Q ss_pred             ----------------CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHH----h--
Q 025273          155 ----------------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIE----Q--  212 (255)
Q Consensus       155 ----------------~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~----~--  212 (255)
                                      .....|+.+|.+.+.+++.++..   +++++.+.||.+.++.........+....+.    .  
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~  220 (367)
T TIGR01746       144 DLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDR---GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG  220 (367)
T ss_pred             CCCCccccccccccccccCCChHHHHHHHHHHHHHHHhc---CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC
Confidence                            12347999999999998876543   8999999999998752221111111111110    0  


Q ss_pred             hcc-----cCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          213 NTL-----LNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       213 ~~~-----~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ..+     ...+...+|+++.++.++.......+|+++++.++...
T Consensus       221 ~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~  266 (367)
T TIGR01746       221 AYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPV  266 (367)
T ss_pred             CCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCC
Confidence            011     12267889999999998866544345889999887544

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.82  E-value=6.7e-18  Score=123.38  Aligned_cols=217  Identities=18%  Similarity=0.155  Sum_probs=175.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG--K   89 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~   89 (255)
                      -++|+|.||-|.+|+++++.|.+.++.|.-+|-.+++-.          ..-.++..|-+-.|+-+.+++++-+.++  +
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A----------d~sI~V~~~~swtEQe~~v~~~vg~sL~gek   72 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA----------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEK   72 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc----------cceEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence            468999999999999999999999999999987754311          1333455666667777888888888763  8


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      +|.++|-||.+.........-....+-+|...+...-+..+.+..+++++|-+-..+..++..+.|++-.|+.+|+|+..
T Consensus        73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHq  152 (236)
T KOG4022|consen   73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKAAVHQ  152 (236)
T ss_pred             cceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHHHHHH
Confidence            99999999987643332223334566788888888888888889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHh---CCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          170 LTKALAAEM---APDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       170 l~~~la~e~---~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      ++++|+.+-   ++|-.+..|.|-..||||.+.+.++.++          +.+...+.+++..+.+..+..+.-+|..+.
T Consensus       153 Lt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADf----------ssWTPL~fi~e~flkWtt~~~RPssGsLlq  222 (236)
T KOG4022|consen  153 LTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADF----------SSWTPLSFISEHFLKWTTETSRPSSGSLLQ  222 (236)
T ss_pred             HHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcc----------cCcccHHHHHHHHHHHhccCCCCCCCceEE
Confidence            999999984   3477888999999999999998887653          446678899999998888877777888777


Q ss_pred             eC
Q 025273          247 VA  248 (255)
Q Consensus       247 ~d  248 (255)
                      +-
T Consensus       223 i~  224 (236)
T KOG4022|consen  223 IT  224 (236)
T ss_pred             EE
Confidence            63

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.81  E-value=2.4e-18  Score=142.20  Aligned_cols=219  Identities=17%  Similarity=0.172  Sum_probs=154.3

Q ss_pred             EEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           16 IVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        16 lItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      |||||+|.||++++++|+++|  ++|.++++......  ...... .....++++|+++.++++++++       ..|++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~-~~~~~~~~~Di~d~~~l~~a~~-------g~d~V   70 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK-SGVKEYIQGDITDPESLEEALE-------GVDVV   70 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc-ccceeEEEeccccHHHHHHHhc-------CCceE
Confidence            699999999999999999999  78999998765422  112211 1233389999999999999887       68999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------------CCC
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------------QSS  156 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------------~~~  156 (255)
                      ||+|+......      ....++.+++|+.|+.++++++...  .-.++|++||..+..+                 ...
T Consensus        71 ~H~Aa~~~~~~------~~~~~~~~~vNV~GT~nvl~aa~~~--~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~  142 (280)
T PF01073_consen   71 FHTAAPVPPWG------DYPPEEYYKVNVDGTRNVLEAARKA--GVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSP  142 (280)
T ss_pred             EEeCccccccC------cccHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcCcceeEeccCCCCcccCCcCCcccccc
Confidence            99999764322      2335778999999999999999865  3459999999876432                 113


Q ss_pred             ChhhHhhHHHHHHHHHHHHH-HhCC--CeeEEEEeCCcccCCccccccCChhHHHHHHhh---------cccCCCCCHHH
Q 025273          157 MAMYGVTKTALLGLTKALAA-EMAP--DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN---------TLLNRLGTTRD  224 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~-e~~~--~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d  224 (255)
                      ...|+.||+..|.++..... ++..  .++..+|+|..|..|.-....+.  ........         .-...+...++
T Consensus       143 ~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~--~~~~~~~g~~~~~~g~~~~~~~~vyV~N  220 (280)
T PF01073_consen  143 LDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPR--LVKMVRSGLFLFQIGDGNNLFDFVYVEN  220 (280)
T ss_pred             cCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccch--hhHHHHhcccceeecCCCceECcEeHHH
Confidence            45899999999999987654 2222  58899999999988754333221  11111111         11122567899


Q ss_pred             HHHHHHHhcC---CC--CCCccccEEEeCCCcccC
Q 025273          225 MAAAAAFLAS---DD--ASYITGETLVVAGGMPSR  254 (255)
Q Consensus       225 ~a~~~~~l~s---~~--~~~~~G~~i~~dgG~~~~  254 (255)
                      +|.+++..+.   +.  .....||.+.+..|.+..
T Consensus       221 vA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~  255 (280)
T PF01073_consen  221 VAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP  255 (280)
T ss_pred             HHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence            9997765432   22  345789999998887653

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.81  E-value=5.5e-18  Score=143.20  Aligned_cols=226  Identities=17%  Similarity=0.046  Sum_probs=152.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      +||||||+|+||++++++|.++|++|++++|...........+.. ..++.++.+|+++.++++++++.     +++|++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~v   74 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER-ITRVTFVEGDLRDRELLDRLFEE-----HKIDAV   74 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc-ccceEEEECCCCCHHHHHHHHHh-----CCCcEE
Confidence            489999999999999999999999999887654332222222211 12577889999999999888764     379999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------CCCChhhHh
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~  162 (255)
                      ||+||.....     ...++..+.++.|+.++..+++++...  +..++|++||...+..           ..+...|+.
T Consensus        75 v~~ag~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~  147 (328)
T TIGR01179        75 IHFAGLIAVG-----ESVQDPLKYYRNNVVNTLNLLEAMQQT--GVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGR  147 (328)
T ss_pred             EECccccCcc-----hhhcCchhhhhhhHHHHHHHHHHHHhc--CCCEEEEecchhhcCCCCCCCccccCCCCCCCchHH
Confidence            9999975321     122334567899999999999877653  2358999998654321           124568999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc-----CChhHHH----HHH-hhc---------c------cC
Q 025273          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT-----SNDGVRQ----TIE-QNT---------L------LN  217 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~-----~~~~~~~----~~~-~~~---------~------~~  217 (255)
                      +|++.+.+++.++++. .++++..+.|+.+..+......     ....+..    ... ...         +      ..
T Consensus       148 sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  226 (328)
T TIGR01179       148 SKLMSERILRDLSKAD-PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVR  226 (328)
T ss_pred             HHHHHHHHHHHHHHhc-cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEE
Confidence            9999999999988762 2688899999887776432111     0111111    111 000         0      12


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          218 RLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       218 ~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .++..+|+++++..++........|+.+++.+|...
T Consensus       227 ~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~  262 (328)
T TIGR01179       227 DYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGF  262 (328)
T ss_pred             eeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcc
Confidence            356789999998888754222234688898777554

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.80  E-value=6.5e-18  Score=136.28  Aligned_cols=212  Identities=21%  Similarity=0.207  Sum_probs=157.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv   94 (255)
                      ||||||+|.||++++++|+++|+.|+.+.|+.........+.     ++.++.+|+++.+.++++++..     .+|.+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi   70 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVI   70 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH-----TESEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc-----CceEEE
Confidence            799999999999999999999999888888776543322222     8889999999999999999876     799999


Q ss_pred             EcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC-----------CCChhhHhh
Q 025273           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------SSMAMYGVT  163 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~s  163 (255)
                      |+|+...     ...+.+.....++.|+.+..++++.+...-.  .+++++||...+...           .+...|+.+
T Consensus        71 ~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~  143 (236)
T PF01370_consen   71 HLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAAREAGV--KRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGAS  143 (236)
T ss_dssp             EEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHH
T ss_pred             Eeecccc-----ccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccc
Confidence            9999742     1122245677888999999999988875432  599999997554322           245679999


Q ss_pred             HHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCc---cccccCChhHHHHHHhhc---------ccCCCCCHHHHHHHHHH
Q 025273          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF---AEYITSNDGVRQTIEQNT---------LLNRLGTTRDMAAAAAF  231 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~---~~~~~~~~~~~~~~~~~~---------~~~~~~~~~d~a~~~~~  231 (255)
                      |...+.+++.+..+.  ++++..+.|+.+..+.   .....-...+........         ....+...+|+++++..
T Consensus       144 K~~~e~~~~~~~~~~--~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  221 (236)
T PF01370_consen  144 KRAAEELLRDYAKKY--GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVA  221 (236)
T ss_dssp             HHHHHHHHHHHHHHH--TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHH
T ss_pred             ccccccccccccccc--ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHH
Confidence            999999999998887  7899999999998887   111101122222222221         11224568999999999


Q ss_pred             hcCCCCCCccccEEEe
Q 025273          232 LASDDASYITGETLVV  247 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~  247 (255)
                      +++...  ..|+.++|
T Consensus       222 ~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  222 ALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHSC--TTTEEEEE
T ss_pred             HHhCCC--CCCCEEEe
Confidence            987765  56788886

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.80  E-value=1.3e-17  Score=136.09  Aligned_cols=200  Identities=19%  Similarity=0.176  Sum_probs=131.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   87 (255)
                      +.+++++|||||+|+||++++++|+++|++|+++.|+.+..+...   . .+..+.++++|+++. +.+.+       .+
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~-~~~~~~~~~~Dl~d~~~~l~~-------~~   82 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL---P-QDPSLQIVRADVTEGSDKLVE-------AI   82 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc---c-cCCceEEEEeeCCCCHHHHHH-------Hh
Confidence            356799999999999999999999999999999999976543321   1 134688899999973 33222       22


Q ss_pred             -CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC---CCCCChhhHhh
Q 025273           88 -GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ---PQSSMAMYGVT  163 (255)
Q Consensus        88 -g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~---~~~~~~~y~~s  163 (255)
                       .++|++|+++|......+.         ..+++|+.+..++++++...  +.++||++||...+.   +.+....|...
T Consensus        83 ~~~~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~~~~--~~~~iV~iSS~~v~g~~~~~~~~~~~~~~  151 (251)
T PLN00141         83 GDDSDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEACRKA--GVTRFILVSSILVNGAAMGQILNPAYIFL  151 (251)
T ss_pred             hcCCCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHHHHc--CCCEEEEEccccccCCCcccccCcchhHH
Confidence             2799999999864211111         12468888888888887542  346999999986442   22233456665


Q ss_pred             HHHHHHHHHHHHHH--hCC-CeeEEEEeCCcccCCcccc-ccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          164 KTALLGLTKALAAE--MAP-DTRVNCVAPGFVPTHFAEY-ITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       164 K~a~~~l~~~la~e--~~~-~v~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      |.....+...+..|  +.. +++++.|+||++.++.... .....       .......+++++|+|+.+..++....
T Consensus       152 ~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~-------~~~~~~~~i~~~dvA~~~~~~~~~~~  222 (251)
T PLN00141        152 NLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEP-------EDTLYEGSISRDQVAEVAVEALLCPE  222 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECC-------CCccccCcccHHHHHHHHHHHhcChh
Confidence            65443333323333  233 8999999999997764221 11000       00112345799999999999986654

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.79  E-value=2.1e-17  Score=141.11  Aligned_cols=216  Identities=12%  Similarity=0.086  Sum_probs=146.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCC-CHHHHHHHHHHHHHHhCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS-NGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~~   90 (255)
                      |+||||||+|.||++++++|+++ |++|++++|+......    +. ....+.++.+|++ +.+.+.++++       ++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~~-------~~   69 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LV-NHPRMHFFEGDITINKEWIEYHVK-------KC   69 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hc-cCCCeEEEeCCCCCCHHHHHHHHc-------CC
Confidence            46999999999999999999986 6999999987543221    11 1236888899998 5666555443       68


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC----------------
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ----------------  154 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------------  154 (255)
                      |.+||+|+......     ..++.+..+++|+.++.++++++...   +.++|++||...+.+.                
T Consensus        70 d~ViH~aa~~~~~~-----~~~~p~~~~~~n~~~~~~ll~aa~~~---~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~  141 (347)
T PRK11908         70 DVILPLVAIATPAT-----YVKQPLRVFELDFEANLPIVRSAVKY---GKHLVFPSTSEVYGMCPDEEFDPEASPLVYGP  141 (347)
T ss_pred             CEEEECcccCChHH-----hhcCcHHHHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeccCCCcCcCccccccccCc
Confidence            99999999754211     11123466799999999999887653   2599999997543210                


Q ss_pred             --CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC----Ch----hHHHHHHhh---------cc
Q 025273          155 --SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS----ND----GVRQTIEQN---------TL  215 (255)
Q Consensus       155 --~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~----~~----~~~~~~~~~---------~~  215 (255)
                        .+...|+.+|.+.+.+++.++.+.  ++.+..+.|+.+..+.......    ..    .+...+...         ..
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~  219 (347)
T PRK11908        142 INKPRWIYACSKQLMDRVIWAYGMEE--GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQ  219 (347)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHc--CCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCce
Confidence              122379999999999999888765  5677778887776654322110    01    111111111         12


Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          216 LNRLGTTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       216 ~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      .+.+...+|+++++..++........|+.+++.++
T Consensus       220 ~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        220 KRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             eeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence            23478899999999888865432245789999875

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.79  E-value=5.5e-18  Score=155.80  Aligned_cols=220  Identities=12%  Similarity=0.072  Sum_probs=152.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHH-HHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ-RKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~   87 (255)
                      .++++||||||+|.||++++++|+++ |++|++++|+.......    . ...++.++.+|+++.++ ++++++      
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----~-~~~~~~~~~gDl~d~~~~l~~~l~------  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----L-GHPRFHFVEGDISIHSEWIEYHIK------  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----c-CCCceEEEeccccCcHHHHHHHhc------
Confidence            56789999999999999999999986 79999999986543221    1 12368888999998655 343332      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------C--
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------Q--  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~--  154 (255)
                       ++|++||+|+.......     .+..+..+++|+.++.++++++...-   .++|++||...+..           .  
T Consensus       382 -~~D~ViHlAa~~~~~~~-----~~~~~~~~~~Nv~~t~~ll~a~~~~~---~~~V~~SS~~vyg~~~~~~~~E~~~~~~  452 (660)
T PRK08125        382 -KCDVVLPLVAIATPIEY-----TRNPLRVFELDFEENLKIIRYCVKYN---KRIIFPSTSEVYGMCTDKYFDEDTSNLI  452 (660)
T ss_pred             -CCCEEEECccccCchhh-----ccCHHHHHHhhHHHHHHHHHHHHhcC---CeEEEEcchhhcCCCCCCCcCccccccc
Confidence             69999999997542111     11234578999999999999987652   58999999654321           0  


Q ss_pred             -----CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC----C----hhHHHHHHhh--------
Q 025273          155 -----SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS----N----DGVRQTIEQN--------  213 (255)
Q Consensus       155 -----~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~----~----~~~~~~~~~~--------  213 (255)
                           .+...|+.+|.+.+.+++.++.++  ++++..+.|+.+..|.......    .    ..+.......        
T Consensus       453 ~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~--g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~  530 (660)
T PRK08125        453 VGPINKQRWIYSVSKQLLDRVIWAYGEKE--GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDG  530 (660)
T ss_pred             cCCCCCCccchHHHHHHHHHHHHHHHHhc--CCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCC
Confidence                 122369999999999999988776  6788889999888764322110    0    1111111111        


Q ss_pred             -cccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCc
Q 025273          214 -TLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       214 -~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                       ...+.+...+|+++++..++........|+++++.+|.
T Consensus       531 g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        531 GKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             CceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence             11234678999999998888654323468899998874

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.79  E-value=1.9e-17  Score=152.71  Aligned_cols=228  Identities=14%  Similarity=0.028  Sum_probs=154.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCc--hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      ..++|+||||||+|.||++++++|+++  |++|++++|..  +....+...  ....++.++.+|+++.+.+..++..  
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~--   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT--   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh--
Confidence            356899999999999999999999998  67899888753  122211110  1134788899999998887766532  


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC------------
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------  152 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------------  152 (255)
                         .++|++||+|+......     ...+....+++|+.++.++++++...- ...++|++||...+.            
T Consensus        79 ---~~~D~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~~vyg~~~~~~~~~~~E  149 (668)
T PLN02260         79 ---EGIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDADVGNHE  149 (668)
T ss_pred             ---cCCCEEEECCCccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHHhCCCccccccCccc
Confidence               27999999999754211     112234677999999999998876532 235899999975432            


Q ss_pred             --CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcc---------cCCCCC
Q 025273          153 --PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL---------LNRLGT  221 (255)
Q Consensus       153 --~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  221 (255)
                        +..+...|+.+|.+.+.+++.++.++  ++.+..+.|+.+..+-.....--..+........+         ...+..
T Consensus       150 ~~~~~p~~~Y~~sK~~aE~~v~~~~~~~--~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ih  227 (668)
T PLN02260        150 ASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLY  227 (668)
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHc--CCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEE
Confidence              12245679999999999999888776  67888899998887643210000111111111111         123567


Q ss_pred             HHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          222 TRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       222 ~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      .+|+++++..++...   ..|+++++.++...+
T Consensus       228 V~Dva~a~~~~l~~~---~~~~vyni~~~~~~s  257 (668)
T PLN02260        228 CEDVAEAFEVVLHKG---EVGHVYNIGTKKERR  257 (668)
T ss_pred             HHHHHHHHHHHHhcC---CCCCEEEECCCCeeE
Confidence            899999998887543   246889998876543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.78  E-value=7.1e-18  Score=145.06  Aligned_cols=219  Identities=15%  Similarity=0.075  Sum_probs=149.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++|+||||||+|.||++++++|.++|++|++++|......      ........++.+|+++.+.+..+++       ++
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   86 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SEDMFCHEFHLVDLRVMENCLKVTK-------GV   86 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccccccceEEECCCCCHHHHHHHHh-------CC
Confidence            5789999999999999999999999999999998643211      0111124667899999887766654       68


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------------C
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------------P  153 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------------~  153 (255)
                      |++||+|+...... +...   .....+..|+.++.++++++...  ...++|++||...+.                 +
T Consensus        87 D~Vih~Aa~~~~~~-~~~~---~~~~~~~~N~~~t~nll~aa~~~--~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p  160 (370)
T PLN02695         87 DHVFNLAADMGGMG-FIQS---NHSVIMYNNTMISFNMLEAARIN--GVKRFFYASSACIYPEFKQLETNVSLKESDAWP  160 (370)
T ss_pred             CEEEEcccccCCcc-cccc---CchhhHHHHHHHHHHHHHHHHHh--CCCEEEEeCchhhcCCccccCcCCCcCcccCCC
Confidence            99999998653211 1111   12345678999999999987643  234899999874321                 2


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC----ChhHHHHHHh-hc---------ccCCC
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQ-NT---------LLNRL  219 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~-~~---------~~~~~  219 (255)
                      ..+...|+.+|.+.+.+++.++..+  ++++..+.|+.+..|.......    ...+...... ..         ....+
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~--g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~  238 (370)
T PLN02695        161 AEPQDAYGLEKLATEELCKHYTKDF--GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSF  238 (370)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeE
Confidence            3355689999999999999887765  7888999999888874321110    0112111111 01         12235


Q ss_pred             CCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          220 GTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       220 ~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ...+|++.++..++...    .++.+++.+|...+
T Consensus       239 i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~s  269 (370)
T PLN02695        239 TFIDECVEGVLRLTKSD----FREPVNIGSDEMVS  269 (370)
T ss_pred             EeHHHHHHHHHHHHhcc----CCCceEecCCCcee
Confidence            67899999998877543    25678888776543

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.77  E-value=2.7e-17  Score=138.16  Aligned_cols=214  Identities=16%  Similarity=0.180  Sum_probs=141.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH--HhCCCCE
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE--KFGKIDV   92 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g~~d~   92 (255)
                      ||||||+|.||++++++|+++|++++++.|+....... ..         +..+|+++..+.+++++.+.+  .++++|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~---------~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~   71 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN---------LVDLDIADYMDKEDFLAQIMAGDDFGDIEA   71 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh---------hhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence            79999999999999999999999766665554332111 01         134577776666666655432  2357999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------CCCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~  161 (255)
                      +||+|+.... .   ....   +..++.|+.++.++++++...   +.++|++||...+..           ..+...|+
T Consensus        72 Vih~A~~~~~-~---~~~~---~~~~~~n~~~t~~ll~~~~~~---~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  141 (308)
T PRK11150         72 IFHEGACSST-T---EWDG---KYMMDNNYQYSKELLHYCLER---EIPFLYASSAATYGGRTDDFIEEREYEKPLNVYG  141 (308)
T ss_pred             EEECceecCC-c---CCCh---HHHHHHHHHHHHHHHHHHHHc---CCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHH
Confidence            9999986432 1   1122   346899999999999988753   237999999754321           23456899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCCh----hHHHHHHhhc----------ccCCCCCHHHHHH
Q 025273          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSND----GVRQTIEQNT----------LLNRLGTTRDMAA  227 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~----------~~~~~~~~~d~a~  227 (255)
                      .+|.+.+.+++.++.+.  ++.+..+.|+.+..+.........    .+........          ..+.++..+|+++
T Consensus       142 ~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~  219 (308)
T PRK11150        142 YSKFLFDEYVRQILPEA--NSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAA  219 (308)
T ss_pred             HHHHHHHHHHHHHHHHc--CCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHH
Confidence            99999999998887664  678888888888776432110001    1111121111          1123568899999


Q ss_pred             HHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          228 AAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ++..++...    .+.++++.+|...+
T Consensus       220 a~~~~~~~~----~~~~yni~~~~~~s  242 (308)
T PRK11150        220 VNLWFWENG----VSGIFNCGTGRAES  242 (308)
T ss_pred             HHHHHHhcC----CCCeEEcCCCCcee
Confidence            988887543    24589998887544

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.76  E-value=3.7e-17  Score=131.33  Aligned_cols=150  Identities=21%  Similarity=0.173  Sum_probs=120.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++||||||+|-||++++.+|++.|++|+++|.-...-.......     ...+++.|+.|.+.++++|++-     +||.
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~-----~ida   70 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-----QFKFYEGDLLDRALLTAVFEEN-----KIDA   70 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-----cCceEEeccccHHHHHHHHHhc-----CCCE
Confidence            47999999999999999999999999999998765433222111     1678999999999999998876     8999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-----------CCCCCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQSSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-----------~~~~~~~~y~  161 (255)
                      +||-||...-.     .+.+.-.+.++.|+.|++.+++++..+-.  .++||-||.+.+           .+..+.++||
T Consensus        71 ViHFAa~~~Vg-----ESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv--~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG  143 (329)
T COG1087          71 VVHFAASISVG-----ESVQNPLKYYDNNVVGTLNLIEAMLQTGV--KKFIFSSTAAVYGEPTTSPISETSPLAPINPYG  143 (329)
T ss_pred             EEECccccccc-----hhhhCHHHHHhhchHhHHHHHHHHHHhCC--CEEEEecchhhcCCCCCcccCCCCCCCCCCcch
Confidence            99999976422     34455678899999999999999887653  378888877654           2345678999


Q ss_pred             hhHHHHHHHHHHHHHHhC
Q 025273          162 VTKTALLGLTKALAAEMA  179 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~  179 (255)
                      .||...|.+.+.+++.++
T Consensus       144 ~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         144 RSKLMSEEILRDAAKANP  161 (329)
T ss_pred             hHHHHHHHHHHHHHHhCC
Confidence            999999999999998874

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.75  E-value=1.9e-16  Score=133.29  Aligned_cols=216  Identities=18%  Similarity=0.157  Sum_probs=143.2

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           15 AIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      ||||||+|.||++++++|.++|+ .|++++|..... ... ++.     ...+..|+.+.+.++.+.+.   .+.++|++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~-----~~~~~~d~~~~~~~~~~~~~---~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLA-----DLVIADYIDKEDFLDRLEKG---AFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhh-----heeeeccCcchhHHHHHHhh---ccCCCCEE
Confidence            68999999999999999999998 688887765321 111 111     12456788877666655442   34589999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------CCCChhhHh
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~  162 (255)
                      ||+|+...       ...++.+..+++|+.++.++++++...   +.++|++||...+..           ..+...|+.
T Consensus        71 vh~A~~~~-------~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~  140 (314)
T TIGR02197        71 FHQGACSD-------TTETDGEYMMENNYQYSKRLLDWCAEK---GIPFIYASSAATYGDGEAGFREGRELERPLNVYGY  140 (314)
T ss_pred             EECccccC-------ccccchHHHHHHHHHHHHHHHHHHHHh---CCcEEEEccHHhcCCCCCCcccccCcCCCCCHHHH
Confidence            99999643       112335678899999999999988653   247999999765421           125678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChh----HHHHHHhhc---------------ccCCCCCHH
Q 025273          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDG----VRQTIEQNT---------------LLNRLGTTR  223 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~----~~~~~~~~~---------------~~~~~~~~~  223 (255)
                      +|.+.+.+++.+..+...++++..+.|+.+..+..........    +........               ....+...+
T Consensus       141 sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  220 (314)
T TIGR02197       141 SKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVK  220 (314)
T ss_pred             HHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHH
Confidence            9999999998754433335677888888777654321100001    111111110               112467789


Q ss_pred             HHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          224 DMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       224 d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      |+++++..++..    ..+.++++.++...+
T Consensus       221 D~a~~i~~~~~~----~~~~~yni~~~~~~s  247 (314)
T TIGR02197       221 DVVDVNLWLLEN----GVSGIFNLGTGRARS  247 (314)
T ss_pred             HHHHHHHHHHhc----ccCceEEcCCCCCcc
Confidence            999999988865    135689998876654

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.75  E-value=3.1e-16  Score=137.43  Aligned_cols=217  Identities=14%  Similarity=0.056  Sum_probs=144.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHH-HHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      -++++||||||+|.||++++++|+++|++|++++|...... .....+  ...++.++..|+.+..     +       .
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l-------~  182 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L-------L  182 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h-------c
Confidence            46789999999999999999999999999999987643211 111111  1346778888986542     1       1


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC----------------
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ----------------  152 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~----------------  152 (255)
                      .+|.|||+|+......  ...   +....+++|+.++.++++++...   +.++|++||...+.                
T Consensus       183 ~~D~ViHlAa~~~~~~--~~~---~p~~~~~~Nv~gt~nLleaa~~~---g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  254 (442)
T PLN02206        183 EVDQIYHLACPASPVH--YKF---NPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQVETYWGNVN  254 (442)
T ss_pred             CCCEEEEeeeecchhh--hhc---CHHHHHHHHHHHHHHHHHHHHHh---CCEEEEECChHHhCCCCCCCCCccccccCC
Confidence            5899999998654211  111   23567899999999999988654   24899999986542                


Q ss_pred             CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC--hhHHHHHHhhcc---------cCCCCC
Q 025273          153 PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN--DGVRQTIEQNTL---------LNRLGT  221 (255)
Q Consensus       153 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~  221 (255)
                      |..+...|+.+|.+.+.+++.+.+.+  ++++..+.|+.+..+........  ..+........+         ...+..
T Consensus       255 P~~~~s~Y~~SK~~aE~~~~~y~~~~--g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~  332 (442)
T PLN02206        255 PIGVRSCYDEGKRTAETLTMDYHRGA--NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQF  332 (442)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHh--CCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEe
Confidence            11224579999999999999887765  67777888877766542110000  111111111111         123667


Q ss_pred             HHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          222 TRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       222 ~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      .+|+++++..++....    +..+++.+|...+
T Consensus       333 V~Dva~ai~~a~e~~~----~g~yNIgs~~~~s  361 (442)
T PLN02206        333 VSDLVEGLMRLMEGEH----VGPFNLGNPGEFT  361 (442)
T ss_pred             HHHHHHHHHHHHhcCC----CceEEEcCCCcee
Confidence            8999999988875432    3479998876543

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.74  E-value=2.3e-16  Score=136.40  Aligned_cols=216  Identities=18%  Similarity=0.177  Sum_probs=144.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHH--HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE--AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++++|||||+|+||++++++|+++|++|++++|+....+.  ...+.......+.++++|+++.++++++++..   .
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---~  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---G  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---C
Confidence            457899999999999999999999999999999998754321  11222222346888999999999999888743   1


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +++|++|||++.... .         ....+++|+.+..++++++...  ..+++|++||...+.   +...|..+|...
T Consensus       135 ~~~D~Vi~~aa~~~~-~---------~~~~~~vn~~~~~~ll~aa~~~--gv~r~V~iSS~~v~~---p~~~~~~sK~~~  199 (390)
T PLN02657        135 DPVDVVVSCLASRTG-G---------VKDSWKIDYQATKNSLDAGREV--GAKHFVLLSAICVQK---PLLEFQRAKLKF  199 (390)
T ss_pred             CCCcEEEECCccCCC-C---------CccchhhHHHHHHHHHHHHHHc--CCCEEEEEeeccccC---cchHHHHHHHHH
Confidence            269999999885321 1         0123567888888888877643  235899999987653   355788899988


Q ss_pred             HHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC--ChhHHHHHHhhcc-cCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS--NDGVRQTIEQNTL-LNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +...+.    ...+++...+.|+.+..++...+..  ............. ....+..+|+|..+..++..+.  ..|++
T Consensus       200 E~~l~~----~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~--~~~~~  273 (390)
T PLN02657        200 EAELQA----LDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES--KINKV  273 (390)
T ss_pred             HHHHHh----ccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc--ccCCE
Confidence            877654    1237889999998765432211000  0000000000000 1123678899998888875432  24788


Q ss_pred             EEeCC
Q 025273          245 LVVAG  249 (255)
Q Consensus       245 i~~dg  249 (255)
                      +++.|
T Consensus       274 ~~Igg  278 (390)
T PLN02657        274 LPIGG  278 (390)
T ss_pred             EEcCC
Confidence            99976

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.74  E-value=2.5e-16  Score=132.41  Aligned_cols=212  Identities=22%  Similarity=0.191  Sum_probs=147.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC-CE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI-DV   92 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~-d~   92 (255)
                      .||||||+|.||++++++|.++|+.|+.++|.........       ..+.++.+|+++.+.+...++       .. |.
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~-------~~~d~   67 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK-------GVPDA   67 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHh-------cCCCE
Confidence            3999999999999999999999999999999876544322       367788899998865555544       33 99


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-------------CCCChh
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-------------QSSMAM  159 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-------------~~~~~~  159 (255)
                      +||+|+.......  .. . .....+.+|+.++.++++++..  ....++|+.||.....+             ..+..+
T Consensus        68 vih~aa~~~~~~~--~~-~-~~~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~  141 (314)
T COG0451          68 VIHLAAQSSVPDS--NA-S-DPAEFLDVNVDGTLNLLEAARA--AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNP  141 (314)
T ss_pred             EEEccccCchhhh--hh-h-CHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCH
Confidence            9999997642211  11 1 3456889999999999999987  34458888777553321             122225


Q ss_pred             hHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC---hhHHHHHHhhcc---c-------CCCCCHHHHH
Q 025273          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN---DGVRQTIEQNTL---L-------NRLGTTRDMA  226 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~~---~-------~~~~~~~d~a  226 (255)
                      |+.+|...+.+++.+...  .++.+..+.|+.+..+........   ..+..+.....+   .       ..+...+|++
T Consensus       142 Yg~sK~~~E~~~~~~~~~--~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  219 (314)
T COG0451         142 YGVSKLAAEQLLRAYARL--YGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVA  219 (314)
T ss_pred             HHHHHHHHHHHHHHHHHH--hCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHH
Confidence            999999999999998883  378899999988877654332111   111111222221   1       1245689999


Q ss_pred             HHHHHhcCCCCCCccccEEEeCCCc
Q 025273          227 AAAAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       227 ~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ..+..++.....   + .+++.++.
T Consensus       220 ~~~~~~~~~~~~---~-~~ni~~~~  240 (314)
T COG0451         220 DALLLALENPDG---G-VFNIGSGT  240 (314)
T ss_pred             HHHHHHHhCCCC---c-EEEeCCCC
Confidence            999999876543   2 78887764

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.73  E-value=5.3e-16  Score=135.70  Aligned_cols=217  Identities=14%  Similarity=0.042  Sum_probs=144.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +.++||||||+|.||++++++|+++|++|++++|...........+. ...++.++..|+.+..     +       .++
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~-----~-------~~~  185 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF-GNPRFELIRHDVVEPI-----L-------LEV  185 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc-cCCceEEEECcccccc-----c-------cCC
Confidence            45789999999999999999999999999999986432111111111 1236778888886542     1       268


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC----------------CC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ----------------PQ  154 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~----------------~~  154 (255)
                      |+|||+|+.......  ..   +-...+++|+.++.++++++...   +.++|++||...+.                |.
T Consensus       186 D~ViHlAa~~~~~~~--~~---~p~~~~~~Nv~gT~nLleaa~~~---g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~  257 (436)
T PLN02166        186 DQIYHLACPASPVHY--KY---NPVKTIKTNVMGTLNMLGLAKRV---GARFLLTSTSEVYGDPLEHPQKETYWGNVNPI  257 (436)
T ss_pred             CEEEECceeccchhh--cc---CHHHHHHHHHHHHHHHHHHHHHh---CCEEEEECcHHHhCCCCCCCCCccccccCCCC
Confidence            999999986542111  11   23567899999999999888764   24899999876432                12


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC--hhHHHHHHhhc---------ccCCCCCHH
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN--DGVRQTIEQNT---------LLNRLGTTR  223 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~  223 (255)
                      .+...|+.+|.+.+.+++.+.+..  ++++..+.|+.+..+........  ..+........         ....++..+
T Consensus       258 ~p~s~Yg~SK~~aE~~~~~y~~~~--~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~  335 (436)
T PLN02166        258 GERSCYDEGKRTAETLAMDYHRGA--GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVS  335 (436)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHh--CCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHH
Confidence            234569999999999999887765  57777788877776642210000  11111111111         122367789


Q ss_pred             HHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          224 DMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       224 d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      |+++++..++...    .+.++++.+|...+
T Consensus       336 Dva~ai~~~~~~~----~~giyNIgs~~~~S  362 (436)
T PLN02166        336 DLVDGLVALMEGE----HVGPFNLGNPGEFT  362 (436)
T ss_pred             HHHHHHHHHHhcC----CCceEEeCCCCcEe
Confidence            9999998887533    23479998776543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.73  E-value=6.8e-16  Score=128.34  Aligned_cols=197  Identities=19%  Similarity=0.182  Sum_probs=136.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||+|.||++++++|.++|++|++++|+                     .+|+.+.++++++++..     ++|.+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~-----~~d~v   54 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRAI-----RPDAV   54 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHhC-----CCCEE
Confidence            48999999999999999999999999999885                     36999999998887753     68999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------CCCChhhHh
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~  162 (255)
                      ||+++.... .    ......+..+++|+.++.++++++...   +.++|++||...+.+           ..+...|+.
T Consensus        55 i~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~  126 (287)
T TIGR01214        55 VNTAAYTDV-D----GAESDPEKAFAVNALAPQNLARAAARH---GARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQ  126 (287)
T ss_pred             EECCccccc-c----ccccCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhH
Confidence            999996531 1    111234567899999999999987653   248999998654321           224568999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhc-------ccCCCCCHHHHHHHHHHhcCC
Q 025273          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT-------LLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      +|.+.+.+++.+      +.++..+.|+.+..+...... ...+........       ....+...+|+++++..++..
T Consensus       127 ~K~~~E~~~~~~------~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  199 (287)
T TIGR01214       127 SKLAGEQAIRAA------GPNALIVRTSWLYGGGGGRNF-VRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQR  199 (287)
T ss_pred             HHHHHHHHHHHh------CCCeEEEEeeecccCCCCCCH-HHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhh
Confidence            999999888765      346788889888766421000 011111111111       112345689999999888855


Q ss_pred             CCCCccccEEEeCCCccc
Q 025273          236 DASYITGETLVVAGGMPS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      ...  .++.+++-++...
T Consensus       200 ~~~--~~~~~ni~~~~~~  215 (287)
T TIGR01214       200 LAR--ARGVYHLANSGQC  215 (287)
T ss_pred             ccC--CCCeEEEECCCCc
Confidence            311  2566777665443

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.73  E-value=5.1e-16  Score=129.92  Aligned_cols=146  Identities=18%  Similarity=0.157  Sum_probs=108.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++||||||+|.||++++++|.++| .|++++|...                 .+..|+++.+.++++++..     ++|+
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D~   57 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRKI-----RPDV   57 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHhc-----CCCE
Confidence            369999999999999999999999 7888887631                 2357999999998887754     6999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------CCCCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~  161 (255)
                      +||+|+......     ..++-+..+.+|+.++.++++++...   +.++|++||...+.           +..+...|+
T Consensus        58 Vih~Aa~~~~~~-----~~~~~~~~~~~N~~~~~~l~~aa~~~---g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg  129 (299)
T PRK09987         58 IVNAAAHTAVDK-----AESEPEFAQLLNATSVEAIAKAANEV---GAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYG  129 (299)
T ss_pred             EEECCccCCcch-----hhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEccceEECCCCCCCcCCCCCCCCCCHHH
Confidence            999999754211     11223556789999999999988764   24899999864331           223556899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCC
Q 025273          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~  195 (255)
                      .+|.+.+.+++.+..      +...+.|+++..|
T Consensus       130 ~sK~~~E~~~~~~~~------~~~ilR~~~vyGp  157 (299)
T PRK09987        130 ETKLAGEKALQEHCA------KHLIFRTSWVYAG  157 (299)
T ss_pred             HHHHHHHHHHHHhCC------CEEEEecceecCC
Confidence            999999998875432      2355666666654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.72  E-value=5.3e-16  Score=130.08  Aligned_cols=203  Identities=14%  Similarity=0.140  Sum_probs=139.9

Q ss_pred             EEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Q 025273           16 IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVS   95 (255)
Q Consensus        16 lItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~   95 (255)
                      |||||+|.||++++++|+++|+.|+++.+.                    ..+|+++.++++++++..     ++|++||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih   55 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAKE-----KPTYVIL   55 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhcc-----CCCEEEE
Confidence            699999999999999999999987766432                    147999999988887753     6899999


Q ss_pred             cCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC---------------CCC-Chh
Q 025273           96 NAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP---------------QSS-MAM  159 (255)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~---------------~~~-~~~  159 (255)
                      +|+......  .  ..+.....++.|+.++.++++++...  +-.++|++||...+.+               ..+ ...
T Consensus        56 ~A~~~~~~~--~--~~~~~~~~~~~n~~~~~~ll~~~~~~--~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~  129 (306)
T PLN02725         56 AAAKVGGIH--A--NMTYPADFIRENLQIQTNVIDAAYRH--GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEW  129 (306)
T ss_pred             eeeeecccc--h--hhhCcHHHHHHHhHHHHHHHHHHHHc--CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcch
Confidence            999743111  0  11123456789999999999988764  2348999999754321               112 224


Q ss_pred             hHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC----ChhHHHHH----H----------hhcccCCCCC
Q 025273          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS----NDGVRQTI----E----------QNTLLNRLGT  221 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~----~----------~~~~~~~~~~  221 (255)
                      |+.+|.+.+.+++.+.++.  ++++..+.|+.+..+.......    .+.+...+    .          .......++.
T Consensus       130 Y~~sK~~~e~~~~~~~~~~--~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~  207 (306)
T PLN02725        130 YAIAKIAGIKMCQAYRIQY--GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLH  207 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHh--CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeecccc
Confidence            9999999999998887776  6888999999888774321100    01111111    0          0111235678


Q ss_pred             HHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          222 TRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       222 ~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      .+|+++++..+++...   .++.+++.+|...+
T Consensus       208 v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~s  237 (306)
T PLN02725        208 VDDLADAVVFLMRRYS---GAEHVNVGSGDEVT  237 (306)
T ss_pred             HHHHHHHHHHHHhccc---cCcceEeCCCCccc
Confidence            9999999998886532   23557888776654

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.70  E-value=1.6e-15  Score=127.98  Aligned_cols=207  Identities=13%  Similarity=0.014  Sum_probs=137.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++|+||||+|.||++++++|+++|++|++++|+.+..+..    ..  ..+.++.+|+++.+++.++++       .+|.
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~~--~~v~~v~~Dl~d~~~l~~al~-------g~d~   67 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----KE--WGAELVYGDLSLPETLPPSFK-------GVTA   67 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----hh--cCCEEEECCCCCHHHHHHHHC-------CCCE
Confidence            3699999999999999999999999999999986543221    11  257788999999998877765       6899


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~  172 (255)
                      +||+++...  .        +.....++|+.++.++.+++...-  -.++|++||..+..  .+...|..+|...+.+.+
T Consensus        68 Vi~~~~~~~--~--------~~~~~~~~~~~~~~~l~~aa~~~g--vkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~l~  133 (317)
T CHL00194         68 IIDASTSRP--S--------DLYNAKQIDWDGKLALIEAAKAAK--IKRFIFFSILNAEQ--YPYIPLMKLKSDIEQKLK  133 (317)
T ss_pred             EEECCCCCC--C--------CccchhhhhHHHHHHHHHHHHHcC--CCEEEEeccccccc--cCCChHHHHHHHHHHHHH
Confidence            999876321  1        112356788999999988887642  24899999864431  123568888988877654


Q ss_pred             HHHHHhCCCeeEEEEeCCcccCCccccccCC--hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          173 ALAAEMAPDTRVNCVAPGFVPTHFAEYITSN--DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       173 ~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                          +.  ++....+.|+.+..++.......  .....+.........+...+|+++++..++..+.  ..|+++++.|+
T Consensus       134 ----~~--~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~ni~g~  205 (317)
T CHL00194        134 ----KS--GIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE--TKNKTFPLVGP  205 (317)
T ss_pred             ----Hc--CCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc--ccCcEEEecCC
Confidence                22  67777788875543321111000  0000000000111234577999999988886433  24789999887


Q ss_pred             cccC
Q 025273          251 MPSR  254 (255)
Q Consensus       251 ~~~~  254 (255)
                      ...+
T Consensus       206 ~~~s  209 (317)
T CHL00194        206 KSWN  209 (317)
T ss_pred             CccC
Confidence            6543

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.67  E-value=1.4e-15  Score=123.50  Aligned_cols=155  Identities=23%  Similarity=0.244  Sum_probs=123.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc----hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ----KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++||||||+|.||+|++.+|+++|+.|+++|.-.    +.+++.++.. ..+..+.+++.|+.|.+.++++|+..    
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~-~~~~~v~f~~~Dl~D~~~L~kvF~~~----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLL-GEGKSVFFVEGDLNDAEALEKLFSEV----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhc-CCCCceEEEEeccCCHHHHHHHHhhc----
Confidence            68899999999999999999999999999998543    2333333322 23579999999999999999999876    


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-----------CCC-C
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQ-S  155 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-----------~~~-~  155 (255)
                       ++|.++|-|+.-.-..+     -+.....+..|+.|++++++....+-  -..+|+.||...+           .+. .
T Consensus        77 -~fd~V~Hfa~~~~vgeS-----~~~p~~Y~~nNi~gtlnlLe~~~~~~--~~~~V~sssatvYG~p~~ip~te~~~t~~  148 (343)
T KOG1371|consen   77 -KFDAVMHFAALAAVGES-----MENPLSYYHNNIAGTLNLLEVMKAHN--VKALVFSSSATVYGLPTKVPITEEDPTDQ  148 (343)
T ss_pred             -CCceEEeehhhhccchh-----hhCchhheehhhhhHHHHHHHHHHcC--CceEEEecceeeecCcceeeccCcCCCCC
Confidence             79999999997653322     23336778999999999999888764  3489999987654           122 3


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhC
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMA  179 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~  179 (255)
                      +.++|+.+|.+++...+.+...+.
T Consensus       149 p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  149 PTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCcchhhhHHHHHHHHhhhcccc
Confidence            788999999999999998888764

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.67  E-value=8.2e-15  Score=135.29  Aligned_cols=220  Identities=20%  Similarity=0.093  Sum_probs=142.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHH--HcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHH--HHHHHHHHHHh
Q 025273           13 KVAIVTASTQGIGFGIAERLG--LEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQR--KNLINQTIEKF   87 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~--~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v--~~~~~~~~~~~   87 (255)
                      ++||||||+|.||++++++|+  .+|++|++++|+... .......... ..++.++.+|+++++..  ...++.+    
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            369999999999999999999  579999999997543 2222222221 25788999999985310  1112222    


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-------------C
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-------------Q  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-------------~  154 (255)
                      .++|.+||+|+.....     .+   .....++|+.++.++++.+...  +..++|++||...+..             .
T Consensus        76 ~~~D~Vih~Aa~~~~~-----~~---~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~  145 (657)
T PRK07201         76 GDIDHVVHLAAIYDLT-----AD---EEAQRAANVDGTRNVVELAERL--QAATFHHVSSIAVAGDYEGVFREDDFDEGQ  145 (657)
T ss_pred             cCCCEEEECceeecCC-----CC---HHHHHHHHhHHHHHHHHHHHhc--CCCeEEEEeccccccCccCccccccchhhc
Confidence            3799999999965321     11   2456689999999998887653  2358999998765421             1


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc----CCh---hHHHHHHhhc---c-------cC
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT----SND---GVRQTIEQNT---L-------LN  217 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~----~~~---~~~~~~~~~~---~-------~~  217 (255)
                      .....|+.+|...+.+++.     ..++++..+.|+.+..+-.....    ...   ..........   +       ..
T Consensus       146 ~~~~~Y~~sK~~~E~~~~~-----~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (657)
T PRK07201        146 GLPTPYHRTKFEAEKLVRE-----ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRT  220 (657)
T ss_pred             CCCCchHHHHHHHHHHHHH-----cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCee
Confidence            2235799999999988863     13788899999988765321100    000   0011110000   0       11


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          218 RLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       218 ~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      .+...+|+++++..++...  ...|+++++.++...+
T Consensus       221 ~~v~vddva~ai~~~~~~~--~~~g~~~ni~~~~~~s  255 (657)
T PRK07201        221 NIVPVDYVADALDHLMHKD--GRDGQTFHLTDPKPQR  255 (657)
T ss_pred             eeeeHHHHHHHHHHHhcCc--CCCCCEEEeCCCCCCc
Confidence            2456899999998887543  2468999998876543

>PLN02996 fatty acyl-CoA reductase

Probab=99.66  E-value=2.8e-14  Score=126.75  Aligned_cols=225  Identities=15%  Similarity=0.073  Sum_probs=147.2

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCC---eEEEEeCCch---hHHHHHHHHH---------h-c--------CC
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGA---SVVVSSRKQK---NVDEAVVKLK---------A-R--------GI   61 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~---~V~~~~r~~~---~~~~~~~~~~---------~-~--------~~   61 (255)
                      +..-++||+|+||||+|.||.+++++|++.+.   +|+++.|...   ..+++..++.         . .        ..
T Consensus         5 i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~   84 (491)
T PLN02996          5 CVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISE   84 (491)
T ss_pred             HHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhc
Confidence            33448899999999999999999999998653   5788888653   2222221111         0 0        15


Q ss_pred             eEEEEEecCCCH-------HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhh
Q 025273           62 EVIGVVCHVSNG-------QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP  134 (255)
Q Consensus        62 ~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  134 (255)
                      ++.++..|++++       +.++.+++       .+|++||+|+....    .    +..+..+++|+.|+.++++.+..
T Consensus        85 kv~~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~----~----~~~~~~~~~Nv~gt~~ll~~a~~  149 (491)
T PLN02996         85 KVTPVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF----D----ERYDVALGINTLGALNVLNFAKK  149 (491)
T ss_pred             CEEEEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC----c----CCHHHHHHHHHHHHHHHHHHHHh
Confidence            789999999843       33444433       69999999997541    1    13566889999999999998765


Q ss_pred             cccCCCeEEEEcccCccCCC---------C--------------------------------------------------
Q 025273          135 HLQKGSSVVLISSIAGYQPQ---------S--------------------------------------------------  155 (255)
Q Consensus       135 ~~~~~~~iv~iss~~~~~~~---------~--------------------------------------------------  155 (255)
                      .- .-.++|++||...+...         +                                                  
T Consensus       150 ~~-~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (491)
T PLN02996        150 CV-KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAK  228 (491)
T ss_pred             cC-CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHH
Confidence            31 22489999987643110         0                                                  


Q ss_pred             ---CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC-------hhHHHHHHhh---------ccc
Q 025273          156 ---SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN-------DGVRQTIEQN---------TLL  216 (255)
Q Consensus       156 ---~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~-------~~~~~~~~~~---------~~~  216 (255)
                         ....|+.+|+..|.+++.++    .++.+..+.|..+..+........       ..+.......         ...
T Consensus       229 ~~~~pn~Y~~TK~~aE~lv~~~~----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~  304 (491)
T PLN02996        229 LHGWPNTYVFTKAMGEMLLGNFK----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSV  304 (491)
T ss_pred             hCCCCCchHhhHHHHHHHHHHhc----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCee
Confidence               12359999999999997653    368889999988877654332211       1111111111         112


Q ss_pred             CCCCCHHHHHHHHHHhcCCCC-CCccccEEEeCCC
Q 025273          217 NRLGTTRDMAAAAAFLASDDA-SYITGETLVVAGG  250 (255)
Q Consensus       217 ~~~~~~~d~a~~~~~l~s~~~-~~~~G~~i~~dgG  250 (255)
                      ..++.++|++++++.++.... ..-.++++++.+|
T Consensus       305 ~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        305 LDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             cceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            446678999999877765421 1124688999988

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.64  E-value=1.4e-15  Score=121.02  Aligned_cols=227  Identities=17%  Similarity=0.116  Sum_probs=163.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh----cCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA----RGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +|++||||-+|.-|..+++.|+++|+.|+.+.|.......-.-.+..    ...+++++.+|++|..++.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            68999999999999999999999999999998875433221112211    2456899999999999999999988    


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-----------CCCCC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQSS  156 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-----------~~~~~  156 (255)
                       .||-++|.|+.+.-.     .+.+.-+.+.+++-.|+.+++.++.-+-.+..++...||+.-+           .|+.+
T Consensus        78 -~PdEIYNLaAQS~V~-----vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyP  151 (345)
T COG1089          78 -QPDEIYNLAAQSHVG-----VSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYP  151 (345)
T ss_pred             -Cchhheecccccccc-----ccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCC
Confidence             899999999976533     4455556778999999999999886554445678877775321           46778


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCC----CeeEEEEeCCcccCCccccccC-------ChhHHHHHHhhcccCCCCCHHHH
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAP----DTRVNCVAPGFVPTHFAEYITS-------NDGVRQTIEQNTLLNRLGTTRDM  225 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~----~v~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~d~  225 (255)
                      .++|+++|....-++..++..|+-    ||-+|+=+|.-=.|=..+.+..       .......+.+....+.|+.+.|.
T Consensus       152 rSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DY  231 (345)
T COG1089         152 RSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDY  231 (345)
T ss_pred             CCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHH
Confidence            899999999999999888888752    7888888885322211111110       01111123444566779999999


Q ss_pred             HHHHHHhcCCCCCCccccEEEeCCCcc
Q 025273          226 AAAAAFLASDDASYITGETLVVAGGMP  252 (255)
Q Consensus       226 a~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      +++++.++..+.    ..-+++..|.+
T Consensus       232 Ve~mwlmLQq~~----PddyViATg~t  254 (345)
T COG1089         232 VEAMWLMLQQEE----PDDYVIATGET  254 (345)
T ss_pred             HHHHHHHHccCC----CCceEEecCce
Confidence            999888876653    34455555543

>PLN02778 3,5-epimerase/4-reductase

Probab=99.61  E-value=3.6e-14  Score=118.66  Aligned_cols=195  Identities=14%  Similarity=0.075  Sum_probs=119.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ..+++|||||+|.||++++++|+++|++|+...                        .|+.+.+.+...+++.     ++
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~~-----~~   58 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDAV-----KP   58 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHhc-----CC
Confidence            357899999999999999999999999987432                        2344555555555432     69


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC--cc------------C----
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA--GY------------Q----  152 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~--~~------------~----  152 (255)
                      |++||+||......  .+...+.-...+++|+.++.++++++...-   .+.+++||..  ++            .    
T Consensus        59 D~ViH~Aa~~~~~~--~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g---v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~  133 (298)
T PLN02778         59 THVFNAAGVTGRPN--VDWCESHKVETIRANVVGTLTLADVCRERG---LVLTNYATGCIFEYDDAHPLGSGIGFKEEDT  133 (298)
T ss_pred             CEEEECCcccCCCC--chhhhhCHHHHHHHHHHHHHHHHHHHHHhC---CCEEEEecceEeCCCCCCCcccCCCCCcCCC
Confidence            99999999764211  011123346788999999999999887642   2344454322  11            0    


Q ss_pred             CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEE-EeCCcccCCccccccCChhHHHHHHhhc---cc-CCCCCHHHHHH
Q 025273          153 PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNC-VAPGFVPTHFAEYITSNDGVRQTIEQNT---LL-NRLGTTRDMAA  227 (255)
Q Consensus       153 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~-v~pg~v~t~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~d~a~  227 (255)
                      +.++...|+.+|.+.+.+++.++..+  .+|+.. ..++..   .      ...+........   .. ..+...+|+++
T Consensus       134 p~~~~s~Yg~sK~~~E~~~~~y~~~~--~lr~~~~~~~~~~---~------~~~fi~~~~~~~~~~~~~~s~~yv~D~v~  202 (298)
T PLN02778        134 PNFTGSFYSKTKAMVEELLKNYENVC--TLRVRMPISSDLS---N------PRNFITKITRYEKVVNIPNSMTILDELLP  202 (298)
T ss_pred             CCCCCCchHHHHHHHHHHHHHhhccE--EeeecccCCcccc---c------HHHHHHHHHcCCCeeEcCCCCEEHHHHHH
Confidence            11223679999999999998765433  444421 111110   0      001111111111   11 23667899999


Q ss_pred             HHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          228 AAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++.++...   .+ ..+++.+|...+
T Consensus       203 al~~~l~~~---~~-g~yNigs~~~iS  225 (298)
T PLN02778        203 ISIEMAKRN---LT-GIYNFTNPGVVS  225 (298)
T ss_pred             HHHHHHhCC---CC-CeEEeCCCCccc
Confidence            888887543   23 489997776543

>PRK05865 hypothetical protein; Provisional

Probab=99.60  E-value=3.6e-14  Score=131.48  Aligned_cols=182  Identities=15%  Similarity=0.068  Sum_probs=130.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++++||||+|+||++++++|+++|++|++++|+....      .   ...+.++++|+++.+++.++++       .+|+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~-------~vD~   64 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT-------GADV   64 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence            3699999999999999999999999999999975321      1   1257788999999999887775       6899


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~  172 (255)
                      +||+|+....              .+++|+.++.++++++...  ..+++|++||..              |.+.+.+++
T Consensus        65 VVHlAa~~~~--------------~~~vNv~GT~nLLeAa~~~--gvkr~V~iSS~~--------------K~aaE~ll~  114 (854)
T PRK05865         65 VAHCAWVRGR--------------NDHINIDGTANVLKAMAET--GTGRIVFTSSGH--------------QPRVEQMLA  114 (854)
T ss_pred             EEECCCcccc--------------hHHHHHHHHHHHHHHHHHc--CCCeEEEECCcH--------------HHHHHHHHH
Confidence            9999985321              3578999999988877543  235899999853              888777664


Q ss_pred             HHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhh--ccc------CCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          173 ALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN--TLL------NRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       173 ~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                          ++  ++.+..+.|+.+..+-...      +.......  ...      ..+...+|++.++..++....  ..+..
T Consensus       115 ----~~--gl~~vILRp~~VYGP~~~~------~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~--~~ggv  180 (854)
T PRK05865        115 ----DC--GLEWVAVRCALIFGRNVDN------WVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV--IDSGP  180 (854)
T ss_pred             ----Hc--CCCEEEEEeceEeCCChHH------HHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC--cCCCe
Confidence                23  6788889999887763211      11111110  011      135778999999988874332  23567


Q ss_pred             EEeCCCcccC
Q 025273          245 LVVAGGMPSR  254 (255)
Q Consensus       245 i~~dgG~~~~  254 (255)
                      +++.+|...+
T Consensus       181 yNIgsg~~~S  190 (854)
T PRK05865        181 VNLAAPGELT  190 (854)
T ss_pred             EEEECCCccc
Confidence            8998876543

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.56  E-value=2.3e-13  Score=114.18  Aligned_cols=224  Identities=16%  Similarity=0.131  Sum_probs=147.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++.++|||||+|.+|++++++|.+.+  ..|.++|..+..-.-..++......++.++++|+.+..++...++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            46889999999999999999999998  779999988652111111121135689999999999999888776       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc------------CCCC-
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY------------QPQS-  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~------------~~~~-  155 (255)
                      .. .+||+|+.....     .-..+.+..+++|+.|+.+++......-.  .++|++||....            .|.+ 
T Consensus        76 ~~-~Vvh~aa~~~~~-----~~~~~~~~~~~vNV~gT~nvi~~c~~~~v--~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~  147 (361)
T KOG1430|consen   76 GA-VVVHCAASPVPD-----FVENDRDLAMRVNVNGTLNVIEACKELGV--KRLIYTSSAYVVFGGEPIINGDESLPYPL  147 (361)
T ss_pred             Cc-eEEEeccccCcc-----ccccchhhheeecchhHHHHHHHHHHhCC--CEEEEecCceEEeCCeecccCCCCCCCcc
Confidence            56 777777754321     11224567889999999999998887644  389999987643            2233 


Q ss_pred             -CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhh---------cccCCCCCHHHH
Q 025273          156 -SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN---------TLLNRLGTTRDM  225 (255)
Q Consensus       156 -~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~  225 (255)
                       ....|+.||+-.|.+++....  ..+....++.|-.+..|--....+.  ........         .....+...+-+
T Consensus       148 ~~~d~Y~~sKa~aE~~Vl~an~--~~~l~T~aLR~~~IYGpgd~~~~~~--i~~~~~~g~~~f~~g~~~~~~~~~~~~Nv  223 (361)
T KOG1430|consen  148 KHIDPYGESKALAEKLVLEANG--SDDLYTCALRPPGIYGPGDKRLLPK--IVEALKNGGFLFKIGDGENLNDFTYGENV  223 (361)
T ss_pred             ccccccchHHHHHHHHHHHhcC--CCCeeEEEEccccccCCCCccccHH--HHHHHHccCceEEeeccccccceEEechh
Confidence             235899999999999986554  2268889999988887644333221  11111100         011112222222


Q ss_pred             HH--HHH--HhcCCCCCCccccEEEeCCCcccC
Q 025273          226 AA--AAA--FLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       226 a~--~~~--~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +.  .+.  .|. +.....+||.+.|..|.+.+
T Consensus       224 a~ahilA~~aL~-~~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  224 AWAHILAARALL-DKSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             HHHHHHHHHHHH-hcCCccCceEEEEeCCCcch
Confidence            22  111  222 25566899999999988764

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.55  E-value=9e-14  Score=115.53  Aligned_cols=197  Identities=18%  Similarity=0.201  Sum_probs=122.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +++||||++|.||.++.++|.++|+.|+.++|.                     .+|+++.+++.+++++.     ++|+
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~-----~pd~   54 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF-----KPDV   54 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH-------SE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh-----CCCe
Confidence            479999999999999999999999999999777                     47999999999998877     7999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------CCCCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~  161 (255)
                      +||+||+...     +.-..+-+..+.+|+.++.++.+.+..   .+.++|++||...+.           +..+...||
T Consensus        55 Vin~aa~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~~---~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG  126 (286)
T PF04321_consen   55 VINCAAYTNV-----DACEKNPEEAYAINVDATKNLAEACKE---RGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYG  126 (286)
T ss_dssp             EEE------H-----HHHHHSHHHHHHHHTHHHHHHHHHHHH---CT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHH
T ss_pred             EeccceeecH-----HhhhhChhhhHHHhhHHHHHHHHHHHH---cCCcEEEeeccEEEcCCcccccccCCCCCCCCHHH
Confidence            9999997531     112233567899999999999988875   356999999975432           233567899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhc-------ccCCCCCHHHHHHHHHHhcC
Q 025273          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT-------LLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d~a~~~~~l~s  234 (255)
                      -+|...|..++.    ..+  +..-+.++++..+-...+.  ..+........       ........+|+|..+..++.
T Consensus       127 ~~K~~~E~~v~~----~~~--~~~IlR~~~~~g~~~~~~~--~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~  198 (286)
T PF04321_consen  127 RSKLEGEQAVRA----ACP--NALILRTSWVYGPSGRNFL--RWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIE  198 (286)
T ss_dssp             HHHHHHHHHHHH----H-S--SEEEEEE-SEESSSSSSHH--HHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH----hcC--CEEEEecceecccCCCchh--hhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHH
Confidence            999999988875    222  4455666666655111110  11111111111       11123457999999998885


Q ss_pred             CCCC-CccccEEEeCCCc
Q 025273          235 DDAS-YITGETLVVAGGM  251 (255)
Q Consensus       235 ~~~~-~~~G~~i~~dgG~  251 (255)
                      .... .-...++++.|.-
T Consensus       199 ~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  199 KNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             HHHH-GGG-EEEE---BS
T ss_pred             hcccccccceeEEEecCc
Confidence            5421 0113456666543

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.54  E-value=1.6e-13  Score=111.84  Aligned_cols=159  Identities=21%  Similarity=0.171  Sum_probs=100.8

Q ss_pred             EEcCCCchHHHHHHHHHHcCC--eEEEEeCCchh---HHHHHHHHH----------hcCCeEEEEEecCCCHH------H
Q 025273           17 VTASTQGIGFGIAERLGLEGA--SVVVSSRKQKN---VDEAVVKLK----------ARGIEVIGVVCHVSNGQ------Q   75 (255)
Q Consensus        17 ItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~---~~~~~~~~~----------~~~~~~~~~~~Dv~~~~------~   75 (255)
                      ||||||.+|.++.++|++++.  +|+++.|..+.   .+++.+.+.          ....++.++..|++++.      .
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999998643   333322221          12579999999999854      3


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc--cCC
Q 025273           76 RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--YQP  153 (255)
Q Consensus        76 v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~--~~~  153 (255)
                      .+.+.+       .+|++||+|+......+        +++..++|+.|+.++++.+...-.+  +++++||...  ...
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~~~--------~~~~~~~NV~gt~~ll~la~~~~~~--~~~~iSTa~v~~~~~  143 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFNAP--------YSELRAVNVDGTRNLLRLAAQGKRK--RFHYISTAYVAGSRP  143 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS-S----------EEHHHHHHHHHHHHHHHTSSS-----EEEEEEGGGTTS-T
T ss_pred             hhcccc-------ccceeeecchhhhhccc--------chhhhhhHHHHHHHHHHHHHhccCc--ceEEeccccccCCCC
Confidence            333333       58999999997653322        3446789999999999988743222  9999999321  111


Q ss_pred             ------------------CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccC
Q 025273          154 ------------------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPT  194 (255)
Q Consensus       154 ------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t  194 (255)
                                        ......|..||...|.+++..+.+.  ++.+..+.||.+-.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~--g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  144 GTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH--GLPVTIYRPGIIVG  200 (249)
T ss_dssp             TT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-----EEEEEE-EEE-
T ss_pred             CcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC--CceEEEEecCcccc
Confidence                              1234589999999999999988775  67888899998866

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.54  E-value=7.3e-13  Score=102.81  Aligned_cols=172  Identities=17%  Similarity=0.155  Sum_probs=120.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv   94 (255)
                      |+|+||+|.+|+.++++|+++|++|+++.|++++.+.        ...+.++++|+.+.+++.+.++       +.|.+|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi   65 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAVI   65 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchhh
Confidence            7999999999999999999999999999999887665        5689999999999988887766       799999


Q ss_pred             EcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCC---------ChhhHhhHH
Q 025273           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS---------MAMYGVTKT  165 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~---------~~~y~~sK~  165 (255)
                      +++|....         +         ....-.+++++...  +-.+++++|+...+...+.         +..|...|.
T Consensus        66 ~~~~~~~~---------~---------~~~~~~~~~a~~~~--~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (183)
T PF13460_consen   66 HAAGPPPK---------D---------VDAAKNIIEAAKKA--GVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKR  125 (183)
T ss_dssp             ECCHSTTT---------H---------HHHHHHHHHHHHHT--TSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHH
T ss_pred             hhhhhhcc---------c---------cccccccccccccc--ccccceeeeccccCCCCCcccccccccchhhhHHHHH
Confidence            99985431         0         22233334433332  3448999998876654333         235677776


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       166 a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      ..+.+.+    +.  +++...++|+++..+......-...      ...........+|+|+.++.++
T Consensus       126 ~~e~~~~----~~--~~~~~ivrp~~~~~~~~~~~~~~~~------~~~~~~~~i~~~DvA~~~~~~l  181 (183)
T PF13460_consen  126 EAEEALR----ES--GLNWTIVRPGWIYGNPSRSYRLIKE------GGPQGVNFISREDVAKAIVEAL  181 (183)
T ss_dssp             HHHHHHH----HS--TSEEEEEEESEEEBTTSSSEEEESS------TSTTSHCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHH----hc--CCCEEEEECcEeEeCCCcceeEEec------cCCCCcCcCCHHHHHHHHHHHh
Confidence            6655442    22  7899999999987765321110000      1111124568899999988775

...

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.54  E-value=1.5e-13  Score=111.41  Aligned_cols=180  Identities=19%  Similarity=0.245  Sum_probs=125.7

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv   94 (255)
                      +||||++|-+|.++.+.|. .++.|+.++|.+                     +|+++.+.+.+++++.     +||++|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~-----~PDvVI   55 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET-----RPDVVI   55 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh-----CCCEEE
Confidence            9999999999999999999 778999998875                     6999999999999987     899999


Q ss_pred             EcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------CCCCChhhHhh
Q 025273           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMAMYGVT  163 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~s  163 (255)
                      |+|++....     .-+.+-+..+.+|..|+.++.+++...   +..+|++|+-..+.           +..+...||.|
T Consensus        56 n~AAyt~vD-----~aE~~~e~A~~vNa~~~~~lA~aa~~~---ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~s  127 (281)
T COG1091          56 NAAAYTAVD-----KAESEPELAFAVNATGAENLARAAAEV---GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRS  127 (281)
T ss_pred             ECccccccc-----cccCCHHHHHHhHHHHHHHHHHHHHHh---CCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHH
Confidence            999997522     222335678999999999999988753   45899999754321           24567899999


Q ss_pred             HHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHh-------hcccCCCCCHHHHHHHHHHhcCCC
Q 025273          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ-------NTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      |.+.|..++...    +  +..-+...|+.....+++..  ........       ....+.....+|+|+.+..++...
T Consensus       128 Kl~GE~~v~~~~----~--~~~I~Rtswv~g~~g~nFv~--tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~  199 (281)
T COG1091         128 KLAGEEAVRAAG----P--RHLILRTSWVYGEYGNNFVK--TMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKE  199 (281)
T ss_pred             HHHHHHHHHHhC----C--CEEEEEeeeeecCCCCCHHH--HHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcc
Confidence            999999887544    2  22223333333332211110  00000000       112233457799999999887665


Q ss_pred             C
Q 025273          237 A  237 (255)
Q Consensus       237 ~  237 (255)
                      .
T Consensus       200 ~  200 (281)
T COG1091         200 K  200 (281)
T ss_pred             c
Confidence            3

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.50  E-value=1.1e-11  Score=123.39  Aligned_cols=225  Identities=17%  Similarity=0.087  Sum_probs=143.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC----CeEEEEeCCchhHH---HHHHHHHhc-------CCeEEEEEecCCCHHH--
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEG----ASVVVSSRKQKNVD---EAVVKLKAR-------GIEVIGVVCHVSNGQQ--   75 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G----~~V~~~~r~~~~~~---~~~~~~~~~-------~~~~~~~~~Dv~~~~~--   75 (255)
                      .++|||||++|.||.+++++|++++    ++|++..|+....+   ++.+.....       ..++.++..|++++.-  
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999987    77999989754322   222222211       2378899999985420  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC--
Q 025273           76 RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP--  153 (255)
Q Consensus        76 v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~--  153 (255)
                      -...++++   ...+|++||+|+....     ..+   +......|+.|+.++++.+...  +..+++++||.+.+..  
T Consensus      1051 ~~~~~~~l---~~~~d~iiH~Aa~~~~-----~~~---~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~~~~~ 1117 (1389)
T TIGR03443      1051 SDEKWSDL---TNEVDVIIHNGALVHW-----VYP---YSKLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSALDTEY 1117 (1389)
T ss_pred             CHHHHHHH---HhcCCEEEECCcEecC-----ccC---HHHHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeecCccc
Confidence            01112222   1379999999997541     112   3344567999999999987643  2348999999754311  


Q ss_pred             --------------------------CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHH
Q 025273          154 --------------------------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVR  207 (255)
Q Consensus       154 --------------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~  207 (255)
                                                ......|+.||.+.+.+++.++.   .++.+..+.||.+..+.........+..
T Consensus      1118 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~---~g~~~~i~Rpg~v~G~~~~g~~~~~~~~ 1194 (1389)
T TIGR03443      1118 YVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK---RGLRGCIVRPGYVTGDSKTGATNTDDFL 1194 (1389)
T ss_pred             ccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh---CCCCEEEECCCccccCCCcCCCCchhHH
Confidence                                      01124699999999999987543   2789999999999776432222222222


Q ss_pred             HHHHhh------cc----cCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcc
Q 025273          208 QTIEQN------TL----LNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMP  252 (255)
Q Consensus       208 ~~~~~~------~~----~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ......      .+    ...+...++++++++.++........+.++++.++..
T Consensus      1195 ~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~ 1249 (1389)
T TIGR03443      1195 LRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPR 1249 (1389)
T ss_pred             HHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCC
Confidence            111110      01    1236678999999988875443222345677776643

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.49  E-value=3e-12  Score=104.88  Aligned_cols=181  Identities=15%  Similarity=0.150  Sum_probs=148.5

Q ss_pred             CCEEEEEcC-CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-
Q 025273           12 GKVAIVTAS-TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK-   89 (255)
Q Consensus        12 ~k~vlItGa-~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~-   89 (255)
                      ..+|+|.|. +.-+++.+|..|-++|+.|+++..+.++.+.+..+-   ...+..+..|..+..++...+.++.+.+.. 
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p   79 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRP   79 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence            468999995 899999999999999999999999987655444332   445777888998888888888888776653 


Q ss_pred             -------------CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC----CCeEEEEc-ccCcc
Q 025273           90 -------------IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLIS-SIAGY  151 (255)
Q Consensus        90 -------------~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~iv~is-s~~~~  151 (255)
                                   +..+|.......+.++.+.++.+.|.+.++.|+..++..++.++|+++.    ..+||.+. |..+.
T Consensus        80 ~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ss  159 (299)
T PF08643_consen   80 HVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSS  159 (299)
T ss_pred             CCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhc
Confidence                         3446655555446788999999999999999999999999999999974    45666665 66666


Q ss_pred             CCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCC
Q 025273          152 QPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTH  195 (255)
Q Consensus       152 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~  195 (255)
                      ...+..++-....+++.+|++.|++|+.+ +|.|..+..|.++-.
T Consensus       160 l~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  160 LNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             cCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            67788889999999999999999999987 899999999887655

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.47  E-value=2.4e-12  Score=107.11  Aligned_cols=212  Identities=15%  Similarity=0.083  Sum_probs=122.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv   94 (255)
                      ||||||+|.||.+++++|+++|++|++++|+........        ...  ..|+.. ...       .+.+..+|++|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~--~~~~~~-~~~-------~~~~~~~D~Vv   62 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------WEG--YKPWAP-LAE-------SEALEGADAVI   62 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------cee--eecccc-cch-------hhhcCCCCEEE
Confidence            689999999999999999999999999999876533211        000  112221 111       12345799999


Q ss_pred             EcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----C------CCCChhhHhh
Q 025273           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----P------QSSMAMYGVT  163 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----~------~~~~~~y~~s  163 (255)
                      |+||.....   .....+..+..+++|+.++.++++++...-.+...+++.|+...+.     +      ..+...|+..
T Consensus        63 h~a~~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~  139 (292)
T TIGR01777        63 NLAGEPIAD---KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAEL  139 (292)
T ss_pred             ECCCCCccc---ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHH
Confidence            999964311   1233445567789999999999988875422222455555432221     1      1112223333


Q ss_pred             HHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHH-----HHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQT-----IEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      +...+...+.+. +  .++.+..+.|+.+..+-.............     .........++..+|+++.+..++.... 
T Consensus       140 ~~~~e~~~~~~~-~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~-  215 (292)
T TIGR01777       140 CRDWEEAAQAAE-D--LGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENAS-  215 (292)
T ss_pred             HHHHHHHhhhch-h--cCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcc-
Confidence            444444433221 1  278899999999977632111000000000     0111122356789999999998886533 


Q ss_pred             CccccEEEeCCCccc
Q 025273          239 YITGETLVVAGGMPS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                       .. ..+++.++...
T Consensus       216 -~~-g~~~~~~~~~~  228 (292)
T TIGR01777       216 -IS-GPVNATAPEPV  228 (292)
T ss_pred             -cC-CceEecCCCcc
Confidence             23 35777666544

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.45  E-value=2.1e-12  Score=103.04  Aligned_cols=224  Identities=13%  Similarity=0.016  Sum_probs=155.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEeC---CchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLE--GASVVVSSR---KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      ++.+.++||||.|.||+..+..+...  .++.+.++-   ... ++. .+++ ...++.+++..|+.++..+.-++..  
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~-l~~~-~n~p~ykfv~~di~~~~~~~~~~~~--   78 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKN-LEPV-RNSPNYKFVEGDIADADLVLYLFET--   78 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cch-hhhh-ccCCCceEeeccccchHHHHhhhcc--
Confidence            44589999999999999999999976  455544432   111 222 2222 2357999999999999888777653  


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC------------
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------  152 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------------  152 (255)
                         ..+|.++|-|+....     +.+.-+--.....|++++..+++......+ -.++|.+|+-..+.            
T Consensus        79 ---~~id~vihfaa~t~v-----d~s~~~~~~~~~nnil~t~~Lle~~~~sg~-i~~fvhvSTdeVYGds~~~~~~~E~s  149 (331)
T KOG0747|consen   79 ---EEIDTVIHFAAQTHV-----DRSFGDSFEFTKNNILSTHVLLEAVRVSGN-IRRFVHVSTDEVYGDSDEDAVVGEAS  149 (331)
T ss_pred             ---CchhhhhhhHhhhhh-----hhhcCchHHHhcCCchhhhhHHHHHHhccC-eeEEEEecccceecCccccccccccc
Confidence               389999999987542     122222345578999999999998876653 34899999865441            


Q ss_pred             CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHh---------hcccCCCCCHH
Q 025273          153 PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ---------NTLLNRLGTTR  223 (255)
Q Consensus       153 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~  223 (255)
                      ...+..+|+++|+|.+++.+++.+.|  ++.+..+.-+-|..|-+....--+.+.....+         ....+.++-.+
T Consensus       150 ~~nPtnpyAasKaAaE~~v~Sy~~sy--~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~ve  227 (331)
T KOG0747|consen  150 LLNPTNPYAASKAAAEMLVRSYGRSY--GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVE  227 (331)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHhhcc--CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHH
Confidence            23467789999999999999999999  67777888888877755433222222221111         12334466789


Q ss_pred             HHHHHHHHhcCCCCCCccccEEEeCCCcc
Q 025273          224 DMAAAAAFLASDDASYITGETLVVAGGMP  252 (255)
Q Consensus       224 d~a~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      |+++++-..+...   -.||+++|..-.+
T Consensus       228 D~~ea~~~v~~Kg---~~geIYNIgtd~e  253 (331)
T KOG0747|consen  228 DVSEAFKAVLEKG---ELGEIYNIGTDDE  253 (331)
T ss_pred             HHHHHHHHHHhcC---CccceeeccCcch
Confidence            9999988877552   2589999865443

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.43  E-value=1.4e-11  Score=114.05  Aligned_cols=142  Identities=13%  Similarity=0.020  Sum_probs=100.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      .+++|||||+|.||+++++.|.++|+.|...                        ..|+++.+.+..++++.     ++|
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~------------------------~~~l~d~~~v~~~i~~~-----~pd  430 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG------------------------KGRLEDRSSLLADIRNV-----KPT  430 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee------------------------ccccccHHHHHHHHHhh-----CCC
Confidence            4679999999999999999999999887311                        13677888887777654     799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-----------CC-------
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QP-------  153 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-----------~~-------  153 (255)
                      +|||+|+......  .+...++-+..+++|+.++.++++++...-   .+++++||...+           .|       
T Consensus       431 ~Vih~Aa~~~~~~--~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g---~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~  505 (668)
T PLN02260        431 HVFNAAGVTGRPN--VDWCESHKVETIRANVVGTLTLADVCRENG---LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKP  505 (668)
T ss_pred             EEEECCcccCCCC--CChHHhCHHHHHHHHhHHHHHHHHHHHHcC---CeEEEEcccceecCCcccccccCCCCCcCCCC
Confidence            9999999754211  122233456788999999999999987642   245666553211           01       


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeC
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP  189 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~p  189 (255)
                      .++...|+.+|.+.+.+++.+...+  .+|+..+..
T Consensus       506 ~~~~~~Yg~sK~~~E~~~~~~~~~~--~~r~~~~~~  539 (668)
T PLN02260        506 NFTGSFYSKTKAMVEELLREYDNVC--TLRVRMPIS  539 (668)
T ss_pred             CCCCChhhHHHHHHHHHHHhhhhhe--EEEEEEecc
Confidence            1223689999999999998764222  566666553

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.42  E-value=7.2e-12  Score=110.77  Aligned_cols=161  Identities=16%  Similarity=0.217  Sum_probs=118.9

Q ss_pred             CCEEE----EEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           12 GKVAI----VTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        12 ~k~vl----ItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      |..+|    |+||++|+|.++++.|...|+.|+.+.+.......      ...                           
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~------~~~---------------------------   80 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA------GWG---------------------------   80 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccccc------CcC---------------------------
Confidence            45566    88999999999999999999999987665431000      000                           


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      .+++.+++.+-...        +.++        +.+.+.+.+..++.|.++++||+++|..+..   ....|+++|+++
T Consensus        81 ~~~~~~~~d~~~~~--------~~~~--------l~~~~~~~~~~l~~l~~~griv~i~s~~~~~---~~~~~~~akaal  141 (450)
T PRK08261         81 DRFGALVFDATGIT--------DPAD--------LKALYEFFHPVLRSLAPCGRVVVLGRPPEAA---ADPAAAAAQRAL  141 (450)
T ss_pred             CcccEEEEECCCCC--------CHHH--------HHHHHHHHHHHHHhccCCCEEEEEccccccC---CchHHHHHHHHH
Confidence            13444443222111        1122        2244567777888888889999999986643   345799999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      .+|+|++++|+..+++++.|.|++                            ..+++++..+.|++++...+++|+.+.+
T Consensus       142 ~gl~rsla~E~~~gi~v~~i~~~~----------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~  193 (450)
T PRK08261        142 EGFTRSLGKELRRGATAQLVYVAP----------------------------GAEAGLESTLRFFLSPRSAYVSGQVVRV  193 (450)
T ss_pred             HHHHHHHHHHhhcCCEEEEEecCC----------------------------CCHHHHHHHHHHhcCCccCCccCcEEEe
Confidence            999999999994499999998874                            2678888999999999989999999999


Q ss_pred             CCCcc
Q 025273          248 AGGMP  252 (255)
Q Consensus       248 dgG~~  252 (255)
                      +++..
T Consensus       194 ~~~~~  198 (450)
T PRK08261        194 GAADA  198 (450)
T ss_pred             cCCcc
Confidence            98753

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.41  E-value=2.5e-11  Score=101.20  Aligned_cols=165  Identities=21%  Similarity=0.190  Sum_probs=120.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCch---hHHHHHHHHH-------hcCCeEEEEEecCCCH------HH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQK---NVDEAVVKLK-------ARGIEVIGVVCHVSNG------QQ   75 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~---~~~~~~~~~~-------~~~~~~~~~~~Dv~~~------~~   75 (255)
                      +++|+|||||.+|..+..+|+.+ -++|++.-|-++   ..+++.+.+.       ....++.++..|++.+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999999876 468999888765   3444444443       2256999999999843      33


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC--
Q 025273           76 RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP--  153 (255)
Q Consensus        76 v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~--  153 (255)
                      .+.+.+       .+|.+|||++......+        ..+....|+.|+..+++.+...  +.+.+.++||++....  
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa~~g--k~Kp~~yVSsisv~~~~~  143 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLAATG--KPKPLHYVSSISVGETEY  143 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHHhcC--CCceeEEEeeeeeccccc
Confidence            444433       68999999998764433        4556678999999998877542  3446999998875421  


Q ss_pred             ------------------CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcc
Q 025273          154 ------------------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (255)
Q Consensus       154 ------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~  197 (255)
                                        .....+|+-||-+.|.+++.....   |.++.-+.||++-.+-.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r---GLpv~I~Rpg~I~gds~  202 (382)
T COG3320         144 YSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR---GLPVTIFRPGYITGDSR  202 (382)
T ss_pred             cCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc---CCCeEEEecCeeeccCc
Confidence                              122468999999999999854433   78899999999865433

>PRK12320 hypothetical protein; Provisional

Probab=99.40  E-value=3.6e-11  Score=109.62  Aligned_cols=187  Identities=16%  Similarity=0.143  Sum_probs=120.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||+|.||++++++|.++|++|++++|.....         ....+.++++|+++.. +.+++       ..+|.+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al-------~~~D~V   64 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA-------GEADAV   64 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh-------cCCCEE
Confidence            699999999999999999999999999999874321         1236788999999873 44333       268999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHHH
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA  173 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~  173 (255)
                      ||+|+... .      .      ...+|+.++.++++++...   +.++|++||..+..     ..|.    ..+.+.+ 
T Consensus        65 IHLAa~~~-~------~------~~~vNv~Gt~nLleAA~~~---GvRiV~~SS~~G~~-----~~~~----~aE~ll~-  118 (699)
T PRK12320         65 IHLAPVDT-S------A------PGGVGITGLAHVANAAARA---GARLLFVSQAAGRP-----ELYR----QAETLVS-  118 (699)
T ss_pred             EEcCccCc-c------c------hhhHHHHHHHHHHHHHHHc---CCeEEEEECCCCCC-----cccc----HHHHHHH-
Confidence            99998632 1      0      1247999999998887653   34799999864321     1132    2333322 


Q ss_pred             HHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCC---CCCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          174 LAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNR---LGTTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       174 la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                         .+  ++.+..+.|..+..+.....  ...+...+......+.   +...+|++++++.+++...   +| ++++.||
T Consensus       119 ---~~--~~p~~ILR~~nVYGp~~~~~--~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~---~G-iyNIG~~  187 (699)
T PRK12320        119 ---TG--WAPSLVIRIAPPVGRQLDWM--VCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR---NG-VVDLATP  187 (699)
T ss_pred             ---hc--CCCEEEEeCceecCCCCccc--HhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC---CC-EEEEeCC
Confidence               22  35667777877777632211  0111211111111122   2478999999988875432   34 8999998


Q ss_pred             cccC
Q 025273          251 MPSR  254 (255)
Q Consensus       251 ~~~~  254 (255)
                      ...+
T Consensus       188 ~~~S  191 (699)
T PRK12320        188 DTTN  191 (699)
T ss_pred             CeeE
Confidence            7654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.37  E-value=3.6e-12  Score=101.72  Aligned_cols=208  Identities=16%  Similarity=0.118  Sum_probs=133.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ..++++++||||+|+||++++..|..+|+.|+++|.-...-......+. ...++..+.-|+-.+     ++.       
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~-~~~~fel~~hdv~~p-----l~~-------   90 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI-GHPNFELIRHDVVEP-----LLK-------   90 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc-cCcceeEEEeechhH-----HHH-------
Confidence            3668999999999999999999999999999999877654443333221 134666667777544     443       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc----------------C
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY----------------Q  152 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~----------------~  152 (255)
                      .+|.++|.|+...+.... ..    -..++..|+.++.+++..+.+..   .+++..|+...+                .
T Consensus        91 evD~IyhLAapasp~~y~-~n----pvktIktN~igtln~lglakrv~---aR~l~aSTseVYgdp~~hpq~e~ywg~vn  162 (350)
T KOG1429|consen   91 EVDQIYHLAAPASPPHYK-YN----PVKTIKTNVIGTLNMLGLAKRVG---ARFLLASTSEVYGDPLVHPQVETYWGNVN  162 (350)
T ss_pred             HhhhhhhhccCCCCcccc-cC----ccceeeecchhhHHHHHHHHHhC---ceEEEeecccccCCcccCCCccccccccC
Confidence            579999999876533221 11    13468899999999988776543   589998887654                2


Q ss_pred             CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEE----EEeCC------cccCCccccccCChhHHHHHHhhcccCCCCCH
Q 025273          153 PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVN----CVAPG------FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTT  222 (255)
Q Consensus       153 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~----~v~pg------~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (255)
                      |..+.+.|...|...+.|+.++.++.+-.+||.    ..-|-      -+...+.....+.+.+ .-+......+.+...
T Consensus       163 pigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epl-tv~g~G~qtRSF~yv  241 (350)
T KOG1429|consen  163 PIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPL-TVYGDGKQTRSFQYV  241 (350)
T ss_pred             cCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCe-EEEcCCcceEEEEeH
Confidence            344577899999999999999888875444432    22231      1111111100111000 011111233446678


Q ss_pred             HHHHHHHHHhcCCCCC
Q 025273          223 RDMAAAAAFLASDDAS  238 (255)
Q Consensus       223 ~d~a~~~~~l~s~~~~  238 (255)
                      +|+++.++.|+.++-+
T Consensus       242 sD~Vegll~Lm~s~~~  257 (350)
T KOG1429|consen  242 SDLVEGLLRLMESDYR  257 (350)
T ss_pred             HHHHHHHHHHhcCCCc
Confidence            8899888888866543

>PLN00016 RNA-binding protein; Provisional

Probab=99.36  E-value=1.6e-11  Score=106.13  Aligned_cols=201  Identities=14%  Similarity=0.153  Sum_probs=124.1

Q ss_pred             CCCEEEEE----cCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHH-------HHHHhcCCeEEEEEecCCCHHHHHHH
Q 025273           11 QGKVAIVT----ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV-------VKLKARGIEVIGVVCHVSNGQQRKNL   79 (255)
Q Consensus        11 ~~k~vlIt----Ga~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~~   79 (255)
                      ..++||||    ||+|.||++++++|+++|++|++++|+........       .++.  ...+.++.+|+++   ++++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHH---HHhh
Confidence            35789999    99999999999999999999999999876432221       1121  1247788889876   3333


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCC----
Q 025273           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS----  155 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~----  155 (255)
                      +.     ...+|++||+++..          .           .+...+++++...  .-.++|++||...+....    
T Consensus       126 ~~-----~~~~d~Vi~~~~~~----------~-----------~~~~~ll~aa~~~--gvkr~V~~SS~~vyg~~~~~p~  177 (378)
T PLN00016        126 VA-----GAGFDVVYDNNGKD----------L-----------DEVEPVADWAKSP--GLKQFLFCSSAGVYKKSDEPPH  177 (378)
T ss_pred             hc-----cCCccEEEeCCCCC----------H-----------HHHHHHHHHHHHc--CCCEEEEEccHhhcCCCCCCCC
Confidence            32     12699999987621          1           1223344444322  234899999986553211    


Q ss_pred             ----CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhc---------ccCCCCCH
Q 025273          156 ----SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT---------LLNRLGTT  222 (255)
Q Consensus       156 ----~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  222 (255)
                          ...++. +|...+.+.+    +.  ++.+..+.|+.+..+..... ....+........         ....+...
T Consensus       178 ~E~~~~~p~~-sK~~~E~~l~----~~--~l~~~ilRp~~vyG~~~~~~-~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v  249 (378)
T PLN00016        178 VEGDAVKPKA-GHLEVEAYLQ----KL--GVNWTSFRPQYIYGPGNNKD-CEEWFFDRLVRGRPVPIPGSGIQLTQLGHV  249 (378)
T ss_pred             CCCCcCCCcc-hHHHHHHHHH----Hc--CCCeEEEeceeEECCCCCCc-hHHHHHHHHHcCCceeecCCCCeeeceecH
Confidence                111222 7888887654    22  68889999998887643210 0011111111111         11235678


Q ss_pred             HHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          223 RDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       223 ~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +|+++++..++....  ..|+++++.++...+
T Consensus       250 ~Dva~ai~~~l~~~~--~~~~~yni~~~~~~s  279 (378)
T PLN00016        250 KDLASMFALVVGNPK--AAGQIFNIVSDRAVT  279 (378)
T ss_pred             HHHHHHHHHHhcCcc--ccCCEEEecCCCccC
Confidence            999999998886532  347889998876543

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.36  E-value=1.2e-10  Score=105.09  Aligned_cols=125  Identities=16%  Similarity=0.169  Sum_probs=88.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC---eEEEEeCCch---hHHHHHHHHH---------hc---------CCeEEE
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA---SVVVSSRKQK---NVDEAVVKLK---------AR---------GIEVIG   65 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~---~V~~~~r~~~---~~~~~~~~~~---------~~---------~~~~~~   65 (255)
                      +++|+||||||+|.||..++++|++.+.   +|+++.|...   ..+++.+++.         +.         ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            7899999999999999999999998764   5888888643   2233322221         11         247899


Q ss_pred             EEecCCCHH------HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC
Q 025273           66 VVCHVSNGQ------QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG  139 (255)
Q Consensus        66 ~~~Dv~~~~------~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  139 (255)
                      +..|++++.      ..+.+.+       .+|++||+|+....    .    +..+..+++|+.|+.++++.+...- ..
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f----~----~~~~~a~~vNV~GT~nLLelA~~~~-~l  260 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF----D----ERYDVAIDINTRGPCHLMSFAKKCK-KL  260 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc----c----cCHHHHHHHHHHHHHHHHHHHHHcC-CC
Confidence            999999862      3333222       69999999997541    1    2356788999999999999876532 22


Q ss_pred             CeEEEEcccCc
Q 025273          140 SSVVLISSIAG  150 (255)
Q Consensus       140 ~~iv~iss~~~  150 (255)
                      .++|++||...
T Consensus       261 k~fV~vSTayV  271 (605)
T PLN02503        261 KLFLQVSTAYV  271 (605)
T ss_pred             CeEEEccCcee
Confidence            37888888643

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.34  E-value=3.4e-11  Score=100.12  Aligned_cols=194  Identities=16%  Similarity=0.106  Sum_probs=117.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-CCE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK-IDV   92 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~-~d~   92 (255)
                      ++|||||+|.+|++++++|+++|++|.++.|+.+...         ...+..+.+|+.|.+++..+++.. +.+.. +|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeE
Confidence            4899999999999999999999999999999976532         124556778999999999888543 22334 899


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~  172 (255)
                      ++++++...  .      .  .+        ...++++++...  .-.+||++||.....+.       ..+...+.+.+
T Consensus        71 v~~~~~~~~--~------~--~~--------~~~~~i~aa~~~--gv~~~V~~Ss~~~~~~~-------~~~~~~~~~l~  123 (285)
T TIGR03649        71 VYLVAPPIP--D------L--AP--------PMIKFIDFARSK--GVRRFVLLSASIIEKGG-------PAMGQVHAHLD  123 (285)
T ss_pred             EEEeCCCCC--C------h--hH--------HHHHHHHHHHHc--CCCEEEEeeccccCCCC-------chHHHHHHHHH
Confidence            999876421  0      0  01        112334443332  23489999986543321       12222333322


Q ss_pred             HHHHHhCCCeeEEEEeCCcccCCccccccC----ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeC
Q 025273          173 ALAAEMAPDTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA  248 (255)
Q Consensus       173 ~la~e~~~~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      .    . .++....+.|+++..++......    ...... .........+..++|+++.+..++..+..  .|+.+++-
T Consensus       124 ~----~-~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~~~--~~~~~~l~  195 (285)
T TIGR03649       124 S----L-GGVEYTVLRPTWFMENFSEEFHVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTDKVA--PNTDYVVL  195 (285)
T ss_pred             h----c-cCCCEEEEeccHHhhhhcccccccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcCCCc--CCCeEEee
Confidence            1    1 26888899999876554221100    000000 00011122477899999999888865432  35566666


Q ss_pred             CCcc
Q 025273          249 GGMP  252 (255)
Q Consensus       249 gG~~  252 (255)
                      |+..
T Consensus       196 g~~~  199 (285)
T TIGR03649       196 GPEL  199 (285)
T ss_pred             CCcc
Confidence            6543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.31  E-value=9.3e-12  Score=99.66  Aligned_cols=102  Identities=18%  Similarity=0.168  Sum_probs=79.0

Q ss_pred             CEEEEEcC-CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTAS-TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa-~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      -+=.||.. +||||+++|+.|+++|++|+++++... +       ....    ...||+++.++++++++.+.+.++++|
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l-------~~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~iD   82 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L-------KPEP----HPNLSIREIETTKDLLITLKELVQEHD   82 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c-------cccc----CCcceeecHHHHHHHHHHHHHHcCCCC
Confidence            34456664 688999999999999999999876311 1       0000    245899999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ  130 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  130 (255)
                      ++|||||+.. ..++.+.+.++|++++..   +.+.+.+
T Consensus        83 iLVnnAgv~d-~~~~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        83 ILIHSMAVSD-YTPVYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             EEEECCEecc-ccchhhCCHHHHhhhcch---hhhhccc
Confidence            9999999865 567888999999987544   5555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.28  E-value=8.9e-11  Score=93.78  Aligned_cols=212  Identities=17%  Similarity=0.154  Sum_probs=114.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv   94 (255)
                      ++||||+|.||++++..|.+.|++|+++.|+....+...          .   ..+...+.+.+..+      ..+|++|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~----------~---~~v~~~~~~~~~~~------~~~DavI   61 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL----------H---PNVTLWEGLADALT------LGIDAVI   61 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc----------C---ccccccchhhhccc------CCCCEEE
Confidence            589999999999999999999999999999987644311          0   01111222222211      1699999


Q ss_pred             EcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhH----HHHHHH
Q 025273           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTK----TALLGL  170 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK----~a~~~l  170 (255)
                      |.||..-..+.   -+.+.=++.++.-+..+-.+...+...-.+...+++- |..|+.+......|.-..    -.+..+
T Consensus        62 NLAG~~I~~rr---Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isa-SAvGyYG~~~~~~~tE~~~~g~~Fla~l  137 (297)
T COG1090          62 NLAGEPIAERR---WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISA-SAVGYYGHSGDRVVTEESPPGDDFLAQL  137 (297)
T ss_pred             ECCCCcccccc---CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEec-ceEEEecCCCceeeecCCCCCCChHHHH
Confidence            99997532111   2344334444444444444444433221233334443 444443332222222222    233445


Q ss_pred             HHHHHHHh---CC-CeeEEEEeCCcccCCccccccCChhHHHHH-----HhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          171 TKALAAEM---AP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTI-----EQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       171 ~~~la~e~---~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      |+.|=.+.   .. ++|+..+.-|.|-.+-.........+.+..     ......-.|...+|+++++.|++....  +.
T Consensus       138 c~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~--ls  215 (297)
T COG1090         138 CQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ--LS  215 (297)
T ss_pred             HHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC--CC
Confidence            55444443   23 789999999988765333222211111110     111111126678999999999996643  45


Q ss_pred             ccEEEeCCCcc
Q 025273          242 GETLVVAGGMP  252 (255)
Q Consensus       242 G~~i~~dgG~~  252 (255)
                      |. +++..-.+
T Consensus       216 Gp-~N~taP~P  225 (297)
T COG1090         216 GP-FNLTAPNP  225 (297)
T ss_pred             Cc-ccccCCCc
Confidence            54 45544433

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.28  E-value=6.5e-11  Score=91.10  Aligned_cols=169  Identities=18%  Similarity=0.172  Sum_probs=115.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++++||||+ |+|.++++.|+++|++|++++|+.+..+.+...+.. ...+.++++|+++.++++++++.+.+.++++|.
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            469999998 677789999999999999999998776666554532 457888999999999999999999888899999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l  170 (255)
                      +|+.+=...                       +-++..++...-.  +.-+++.+-...+..+                 
T Consensus        79 lv~~vh~~~-----------------------~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~-----------------  118 (177)
T PRK08309         79 AVAWIHSSA-----------------------KDALSVVCRELDGSSETYRLFHVLGSAASDP-----------------  118 (177)
T ss_pred             EEEeccccc-----------------------hhhHHHHHHHHccCCCCceEEEEeCCcCCch-----------------
Confidence            997754322                       2223333333221  2336777654333211                 


Q ss_pred             HHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC-Ccccc
Q 025273          171 TKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS-YITGE  243 (255)
Q Consensus       171 ~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~-~~~G~  243 (255)
                       +..+..+.+ .....-|..|++..+                   ...||.+=+|+++.++..++.... .+.|+
T Consensus       119 -~~~~~~~~~~~~~~~~i~lgf~~~~-------------------~~~rwlt~~ei~~gv~~~~~~~~~~~~~g~  173 (177)
T PRK08309        119 -RIPSEKIGPARCSYRRVILGFVLED-------------------TYSRWLTHEEISDGVIKAIESDADEHVVGT  173 (177)
T ss_pred             -hhhhhhhhhcCCceEEEEEeEEEeC-------------------CccccCchHHHHHHHHHHHhcCCCeEEEEE
Confidence             111122223 557778889998653                   235688889999988877765533 34454

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.10  E-value=8.3e-10  Score=89.04  Aligned_cols=198  Identities=18%  Similarity=0.147  Sum_probs=120.0

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv   94 (255)
                      |+|+||+|.+|+.+++.|++.+++|.++.|+.+.  ...+++...+.  .++..|..+.+++.++++       ++|.++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g~--~vv~~d~~~~~~l~~al~-------g~d~v~   69 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALGA--EVVEADYDDPESLVAALK-------GVDAVF   69 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTTT--EEEES-TT-HHHHHHHHT-------TCSEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcccc--eEeecccCCHHHHHHHHc-------CCceEE
Confidence            6899999999999999999999999999999843  33445555554  456999999999988877       899999


Q ss_pred             EcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-CC---CCChhhHhhHHHHHHH
Q 025273           95 SNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-PQ---SSMAMYGVTKTALLGL  170 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-~~---~~~~~y~~sK~a~~~l  170 (255)
                      ++.+....      ..           .....++++++...-  -.++| .||..... ..   .+...+-..|..++.+
T Consensus        70 ~~~~~~~~------~~-----------~~~~~~li~Aa~~ag--Vk~~v-~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~  129 (233)
T PF05368_consen   70 SVTPPSHP------SE-----------LEQQKNLIDAAKAAG--VKHFV-PSSFGADYDESSGSEPEIPHFDQKAEIEEY  129 (233)
T ss_dssp             EESSCSCC------CH-----------HHHHHHHHHHHHHHT---SEEE-ESEESSGTTTTTTSTTHHHHHHHHHHHHHH
T ss_pred             eecCcchh------hh-----------hhhhhhHHHhhhccc--cceEE-EEEecccccccccccccchhhhhhhhhhhh
Confidence            98875430      11           112234555555432  23676 45544332 11   1223344567777765


Q ss_pred             HHHHHHHhCCCeeEEEEeCCcccCCccccccC----Chh--HHHHHHhhcccCCC-CCHHHHHHHHHHhcCCCCCCcccc
Q 025273          171 TKALAAEMAPDTRVNCVAPGFVPTHFAEYITS----NDG--VRQTIEQNTLLNRL-GTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       171 ~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~----~~~--~~~~~~~~~~~~~~-~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      .+..      ++....|.||++.......+..    ...  .............+ .+.+|+++.+..++..+....+|.
T Consensus       130 l~~~------~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~  203 (233)
T PF05368_consen  130 LRES------GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGK  203 (233)
T ss_dssp             HHHC------TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEE
T ss_pred             hhhc------cccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCE
Confidence            5433      6788899999765443321111    000  00000000101123 378999999998887765544677


Q ss_pred             EEEeCC
Q 025273          244 TLVVAG  249 (255)
Q Consensus       244 ~i~~dg  249 (255)
                      .+.+.|
T Consensus       204 ~~~~~~  209 (233)
T PF05368_consen  204 TIFLAG  209 (233)
T ss_dssp             EEEEGG
T ss_pred             EEEeCC
Confidence            777654

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.08  E-value=2.8e-09  Score=82.69  Aligned_cols=202  Identities=18%  Similarity=0.147  Sum_probs=126.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC---eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA---SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++||||++|=+|+++.+.+.++|.   +.++.+..                     .+|+++.++.+.+|++.     +
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~e-----k   55 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESE-----K   55 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhcc-----C
Confidence            6899999999999999999999876   24444333                     26999999999999876     7


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc----------------CC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY----------------QP  153 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~----------------~~  153 (255)
                      |..+||.|+..+  +.+.+.+..  .+.+..|+.=.-++++.+..+..+  ++++..|.--+                .|
T Consensus        56 PthVIhlAAmVG--Glf~N~~yn--ldF~r~Nl~indNVlhsa~e~gv~--K~vsclStCIfPdkt~yPIdEtmvh~gpp  129 (315)
T KOG1431|consen   56 PTHVIHLAAMVG--GLFHNNTYN--LDFIRKNLQINDNVLHSAHEHGVK--KVVSCLSTCIFPDKTSYPIDETMVHNGPP  129 (315)
T ss_pred             CceeeehHhhhc--chhhcCCCc--hHHHhhcceechhHHHHHHHhchh--hhhhhcceeecCCCCCCCCCHHHhccCCC
Confidence            999999998764  344444321  223445554445566666554322  23332221111                22


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC----hhHHHHHH--------------hhcc
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN----DGVRQTIE--------------QNTL  215 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~--------------~~~~  215 (255)
                      -+....|+.+|..+.-..+.++.+++.  ...++.|--+..|.-+.....    +.+..++.              ...|
T Consensus       130 hpsN~gYsyAKr~idv~n~aY~~qhg~--~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~P  207 (315)
T KOG1431|consen  130 HPSNFGYSYAKRMIDVQNQAYRQQHGR--DYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSP  207 (315)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCC--ceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCCh
Confidence            345678999998888888999999854  445555554444432222221    12222222              2235


Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCc
Q 025273          216 LNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       216 ~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ++.+...+|+|++++|++..-..   =+.|++..|.
T Consensus       208 lRqFiys~DLA~l~i~vlr~Y~~---vEpiils~ge  240 (315)
T KOG1431|consen  208 LRQFIYSDDLADLFIWVLREYEG---VEPIILSVGE  240 (315)
T ss_pred             HHHHhhHhHHHHHHHHHHHhhcC---ccceEeccCc
Confidence            56677789999999999965433   2455555554

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.97  E-value=4.4e-09  Score=87.44  Aligned_cols=84  Identities=21%  Similarity=0.295  Sum_probs=67.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc---hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ---KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      .+++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++++.+.+++......+.+..+|+++.++++..++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            467899999999 69999999999999997 99999997   66777777775555556667789987777665544   


Q ss_pred             HHhCCCCEEEEcCCCC
Q 025273           85 EKFGKIDVVVSNAAAN  100 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~  100 (255)
                          ..|+|||+....
T Consensus       199 ----~~DilINaTp~G  210 (289)
T PRK12548        199 ----SSDILVNATLVG  210 (289)
T ss_pred             ----cCCEEEEeCCCC
Confidence                569999998654

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.96  E-value=1.5e-09  Score=85.23  Aligned_cols=217  Identities=18%  Similarity=0.127  Sum_probs=143.8

Q ss_pred             CCC-CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH-HHHHHh-----cCCeEEEEEecCCCHHHHHHHHHH
Q 025273           10 FQG-KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA-VVKLKA-----RGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus        10 l~~-k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      .+. |++||||-+|-=|+.+++.|+.+|++|..+-|..+..+.. .+.+-.     .++.....-.|++|...+.+++..
T Consensus        25 ~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~  104 (376)
T KOG1372|consen   25 FRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIST  104 (376)
T ss_pred             cccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhc
Confidence            444 4899999999999999999999999999988776554432 222322     256777788999999999999988


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhc-ccCCCeEEEEcccCcc----------
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH-LQKGSSVVLISSIAGY----------  151 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~iv~iss~~~~----------  151 (255)
                      +     +|+-++|.|+.....     .+.+.-+-+-++...|++.++.++-.. |.++-++.-.|+..-+          
T Consensus       105 i-----kPtEiYnLaAQSHVk-----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE  174 (376)
T KOG1372|consen  105 I-----KPTEVYNLAAQSHVK-----VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSE  174 (376)
T ss_pred             c-----CchhhhhhhhhcceE-----EEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCccc
Confidence            8     799999999976532     233333445577888999999888765 3344455555544221          


Q ss_pred             -CCCCCChhhHhhHHHHHHHHHHHHHHhC----CCeeEEEEeCCcccCCccccccCChh-------HHHHHHhhcccCCC
Q 025273          152 -QPQSSMAMYGVTKTALLGLTKALAAEMA----PDTRVNCVAPGFVPTHFAEYITSNDG-------VRQTIEQNTLLNRL  219 (255)
Q Consensus       152 -~~~~~~~~y~~sK~a~~~l~~~la~e~~----~~v~v~~v~pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~  219 (255)
                       .|+.+.++|+++|.+..-++-.++..|.    .||-+|+-+|--=.+=..+.+...-.       ....+.+....+.|
T Consensus       175 ~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDW  254 (376)
T KOG1372|consen  175 TTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDW  254 (376)
T ss_pred             CCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhccc
Confidence             4566788999999876555554544442    27888888885221111111111000       00112333455678


Q ss_pred             CCHHHHHHHHHHhcCCC
Q 025273          220 GTTRDMAAAAAFLASDD  236 (255)
Q Consensus       220 ~~~~d~a~~~~~l~s~~  236 (255)
                      +.+.|.++++...+..+
T Consensus       255 GhA~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  255 GHAGDYVEAMWLMLQQD  271 (376)
T ss_pred             chhHHHHHHHHHHHhcC
Confidence            88999999887777654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.95  E-value=2.8e-09  Score=91.92  Aligned_cols=80  Identities=20%  Similarity=0.255  Sum_probs=63.0

Q ss_pred             ccCCCCEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCC
Q 025273            8 KRFQGKVAIVTAS----------------TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS   71 (255)
Q Consensus         8 ~~l~~k~vlItGa----------------~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~   71 (255)
                      .+++||++|||||                +|.+|++++++|+++|++|++++++.+ ++        ...  .+..+|++
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--------~~~--~~~~~dv~  252 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--------TPA--GVKRIDVE  252 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--------CCC--CcEEEccC
Confidence            3578999999999                455999999999999999999998753 11        111  13468999


Q ss_pred             CHHHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 025273           72 NGQQRKNLINQTIEKFGKIDVVVSNAAANP  101 (255)
Q Consensus        72 ~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      +.+++.+.++   +.++++|++|||||+..
T Consensus       253 ~~~~~~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        253 SAQEMLDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             CHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence            9888777665   55789999999999864

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.94  E-value=7e-09  Score=96.53  Aligned_cols=172  Identities=19%  Similarity=0.241  Sum_probs=138.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHH---HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDE---AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .|..+|+||-||.|.++++.|..+|++ +++++|+--+...   ....+.+.+..+.+-..|++..+..+.++++. .++
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s-~kl 1846 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEES-NKL 1846 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHh-hhc
Confidence            588999999999999999999999987 8999988554322   23345566888888889999999999998876 456


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +.+..++|.|.+.. ...+++.+++.|+..-+..+.|++++-+.-.+.-..-.-+|..||..--++..++..|+-+.+++
T Consensus      1847 ~~vGGiFnLA~VLR-D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtNYG~aNS~M 1925 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLR-DGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTNYGLANSAM 1925 (2376)
T ss_pred             ccccchhhHHHHHH-hhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccccchhhHHH
Confidence            78999999999876 68899999999999999999999998665544322233788888888888888999999999999


Q ss_pred             HHHHHHHHHHhCCCeeEE
Q 025273          168 LGLTKALAAEMAPDTRVN  185 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~  185 (255)
                      +.++..=..+-.||+.|.
T Consensus      1926 ERiceqRr~~GfPG~AiQ 1943 (2376)
T KOG1202|consen 1926 ERICEQRRHEGFPGTAIQ 1943 (2376)
T ss_pred             HHHHHHhhhcCCCcceee
Confidence            999985444434455443

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.94  E-value=1.9e-07  Score=82.20  Aligned_cols=220  Identities=19%  Similarity=0.150  Sum_probs=141.1

Q ss_pred             cCCCCEEEEEcCC-CchHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHH
Q 025273            9 RFQGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         9 ~l~~k~vlItGa~-~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      .+.++++|||||+ +.||-+++..|+..|++|+++..+-++ .....+.+...    +..+-++..+..+...++.+++.
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            4678999999987 789999999999999999998766433 22344444332    56788889999999999999999


Q ss_pred             HHHHhC--------------CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-----CCCeEE
Q 025273           83 TIEKFG--------------KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-----KGSSVV  143 (255)
Q Consensus        83 ~~~~~g--------------~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-----~~~~iv  143 (255)
                      +-++..              .+|.+|--|+... .+.+.+.... -+..+.+-+++...++-.+.+.-.     .+-++|
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v-~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVV  550 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV-SGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVV  550 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccCCc-cCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceEEE
Confidence            876432              3677777776654 3355554433 233345555555555444443321     123566


Q ss_pred             EEcccCccCCCCCChhhHhhHHHHHHHHHHHHHHh--CCCeeEEEEeCCcccC-CccccccCChhHHHHHHhhcccCCCC
Q 025273          144 LISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM--APDTRVNCVAPGFVPT-HFAEYITSNDGVRQTIEQNTLLNRLG  220 (255)
Q Consensus       144 ~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~--~~~v~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (255)
                      .-.|..- --+.+...|+-+|++++.++.-|..|-  ...+.+..-.-||+.. .++.    ..+......++.-.. .-
T Consensus       551 LPgSPNr-G~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg----~Ndiiv~aiEk~GV~-ty  624 (866)
T COG4982         551 LPGSPNR-GMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMG----HNDIIVAAIEKAGVR-TY  624 (866)
T ss_pred             ecCCCCC-CccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccC----CcchhHHHHHHhCce-ec
Confidence            5555431 113456789999999999988777774  2245555566677764 3322    222222222222222 23


Q ss_pred             CHHHHHHHHHHhcCCC
Q 025273          221 TTRDMAAAAAFLASDD  236 (255)
Q Consensus       221 ~~~d~a~~~~~l~s~~  236 (255)
                      +++|++..++-||+++
T Consensus       625 S~~EmA~~LLgL~sae  640 (866)
T COG4982         625 STDEMAFNLLGLASAE  640 (866)
T ss_pred             CHHHHHHHHHhhccHH
Confidence            7899999988888775

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.87  E-value=6.4e-08  Score=77.83  Aligned_cols=210  Identities=16%  Similarity=0.122  Sum_probs=133.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ..|-++-|.||+|.+|+.++.+|++.|-+|++-+|..+.--...+ +..+-+.+.++..|+.|+++++++++       .
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lk-vmGdLGQvl~~~fd~~DedSIr~vvk-------~  130 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLK-VMGDLGQVLFMKFDLRDEDSIRAVVK-------H  130 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhhee-ecccccceeeeccCCCCHHHHHHHHH-------h
Confidence            567789999999999999999999999999999998654222221 22234689999999999999999988       5


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      -+++||..|--.+.+.   .+.+      ++|+.++-.+.+.+-....+  ++|.+|+..+.  ....+-|=-+|++-+-
T Consensus       131 sNVVINLIGrd~eTkn---f~f~------Dvn~~~aerlAricke~GVe--rfIhvS~Lgan--v~s~Sr~LrsK~~gE~  197 (391)
T KOG2865|consen  131 SNVVINLIGRDYETKN---FSFE------DVNVHIAERLARICKEAGVE--RFIHVSCLGAN--VKSPSRMLRSKAAGEE  197 (391)
T ss_pred             CcEEEEeeccccccCC---cccc------cccchHHHHHHHHHHhhChh--heeehhhcccc--ccChHHHHHhhhhhHH
Confidence            6999999996443322   2222      56777777666655443222  89999987643  3344556778887776


Q ss_pred             HHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccC--------CCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          170 LTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLN--------RLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       170 l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      -++.   ++ |.  ..-|.|.-+...--+.+......... ....|+.        .-...-|+|..+...+.++.+  .
T Consensus       198 aVrd---af-Pe--AtIirPa~iyG~eDrfln~ya~~~rk-~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s--~  268 (391)
T KOG2865|consen  198 AVRD---AF-PE--ATIIRPADIYGTEDRFLNYYASFWRK-FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDS--M  268 (391)
T ss_pred             HHHh---hC-Cc--ceeechhhhcccchhHHHHHHHHHHh-cCceeeecCCcceeeccEEEehHHHHHHHhccCccc--c
Confidence            5552   33 22  22356765544322211111111111 1111221        122457889888888766643  5


Q ss_pred             ccEEEeCC
Q 025273          242 GETLVVAG  249 (255)
Q Consensus       242 G~~i~~dg  249 (255)
                      |.++..-|
T Consensus       269 Gktye~vG  276 (391)
T KOG2865|consen  269 GKTYEFVG  276 (391)
T ss_pred             CceeeecC
Confidence            77776544

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.85  E-value=3.9e-07  Score=74.97  Aligned_cols=193  Identities=16%  Similarity=0.075  Sum_probs=120.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||||.+|++++++|.++|+.|++..|+.+.+....       ..+.+...|+.+...+...++       ..|.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~~~   66 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GVDG   66 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------cccE
Confidence            46999999999999999999999999999999988776654       477888899999999888876       7888


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~  172 (255)
                      +++..+... ... .         .......+.....+...   .....++.+|...+..  .....|..+|...+...+
T Consensus        67 ~~~i~~~~~-~~~-~---------~~~~~~~~~~~~a~~a~---~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l~  130 (275)
T COG0702          67 VLLISGLLD-GSD-A---------FRAVQVTAVVRAAEAAG---AGVKHGVSLSVLGADA--ASPSALARAKAAVEAALR  130 (275)
T ss_pred             EEEEecccc-ccc-c---------hhHHHHHHHHHHHHHhc---CCceEEEEeccCCCCC--CCccHHHHHHHHHHHHHH
Confidence            888877543 221 0         11222333333333332   2234677777665443  345789999999988776


Q ss_pred             HHHHHhCCCeeEEEEe-CCcccCCccccccCChhHHHHHHhh---c--cc--CCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          173 ALAAEMAPDTRVNCVA-PGFVPTHFAEYITSNDGVRQTIEQN---T--LL--NRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       173 ~la~e~~~~v~v~~v~-pg~v~t~~~~~~~~~~~~~~~~~~~---~--~~--~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +....      -..+. |+++...... .     ........   .  +.  -.....+|++......+..+.  ..|+.
T Consensus       131 ~sg~~------~t~lr~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~~~~  196 (275)
T COG0702         131 SSGIP------YTTLRRAAFYLGAGAA-F-----IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TAGRT  196 (275)
T ss_pred             hcCCC------eEEEecCeeeeccchh-H-----HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--ccCcE
Confidence            43333      22333 3332221110 0     00000000   0  01  124567889888877776554  34666


Q ss_pred             EEeCC
Q 025273          245 LVVAG  249 (255)
Q Consensus       245 i~~dg  249 (255)
                      +.+-|
T Consensus       197 ~~l~g  201 (275)
T COG0702         197 YELAG  201 (275)
T ss_pred             EEccC
Confidence            66654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.83  E-value=4.7e-08  Score=76.63  Aligned_cols=84  Identities=32%  Similarity=0.322  Sum_probs=67.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++++++|+||+|++|+.+++.|+++|++|++++|+.++++.+.+.+.... ......+|..+.+++.+.++      
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~------   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK------   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh------
Confidence            36789999999999999999999999999999999999988888777765321 23345678888888776664      


Q ss_pred             CCCCEEEEcCCC
Q 025273           88 GKIDVVVSNAAA   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                       ..|++|++...
T Consensus        97 -~~diVi~at~~  107 (194)
T cd01078          97 -GADVVFAAGAA  107 (194)
T ss_pred             -cCCEEEECCCC
Confidence             67998887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.79  E-value=3.6e-08  Score=79.14  Aligned_cols=100  Identities=16%  Similarity=0.116  Sum_probs=68.5

Q ss_pred             CEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQG-IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      -+-.||+.|+| +|++++++|+++|++|++++|+.....       .....+.++.++     +.+++.+.+.+.++.+|
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-------~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~D   83 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-------EPHPNLSIIEIE-----NVDDLLETLEPLVKDHD   83 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-------CCCCCeEEEEEe-----cHHHHHHHHHHHhcCCC
Confidence            35667776655 999999999999999999987642100       011244555432     33334444445556899


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSS  125 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~  125 (255)
                      ++||+||+.. ..+....+.++|.+++++|.+..
T Consensus        84 ivIh~AAvsd-~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         84 VLIHSMAVSD-YTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EEEeCCccCC-ceehhhhhhhhhhhhhhhhhhhc
Confidence            9999999875 45566677888999988877654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.72  E-value=5.9e-08  Score=83.52  Aligned_cols=110  Identities=16%  Similarity=0.200  Sum_probs=74.0

Q ss_pred             cCCCCEEEEEcC---------------CCc-hHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC
Q 025273            9 RFQGKVAIVTAS---------------TQG-IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN   72 (255)
Q Consensus         9 ~l~~k~vlItGa---------------~~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   72 (255)
                      +++||++|||||               ||| +|.+++++|.++|++|++++++....         .+.  ....+|+++
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~~  250 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVST  250 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEecc
Confidence            478999999999               667 99999999999999999988765321         111  224689999


Q ss_pred             HHHH-HHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHH---HHHHHHHhHHHHHHHHHHhh
Q 025273           73 GQQR-KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVL---DKLWDINVKSSILLLQDAAP  134 (255)
Q Consensus        73 ~~~v-~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~~~~~~~~  134 (255)
                      .+++ +.++++.   ++++|++|+|||+... .+....+ ..+   .+.+.+|+.-.--+++.+..
T Consensus       251 ~~~~~~~~~~~~---~~~~D~~i~~Aavsd~-~~~~~~~-~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       251 AEEMLEAALNEL---AKDFDIFISAAAVADF-KPKTVFE-GKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             HHHHHHHHHHhh---cccCCEEEEccccccc-ccccccc-ccccccCCceeEEEEeCcHHHHHHHh
Confidence            8888 5555443   4689999999999752 3222111 111   12344566555555555543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.69  E-value=7.5e-07  Score=77.42  Aligned_cols=175  Identities=19%  Similarity=0.209  Sum_probs=110.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcC---CeEEEEeCCch---hHHHHHHHH--------Hhc----CCeEEEEEec
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEG---ASVVVSSRKQK---NVDEAVVKL--------KAR----GIEVIGVVCH   69 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G---~~V~~~~r~~~---~~~~~~~~~--------~~~----~~~~~~~~~D   69 (255)
                      .-+++|+++||||+|++|.-++++|++.-   -++++.-|...   .-+++..+.        .+.    ..++..+..|
T Consensus         8 ~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD   87 (467)
T KOG1221|consen    8 QFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD   87 (467)
T ss_pred             HHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence            34889999999999999999999999863   24777766532   222332222        111    2478888889


Q ss_pred             CCCHHH-HHHH-HHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           70 VSNGQQ-RKNL-INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        70 v~~~~~-v~~~-~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      +++++- +.+. .+.+   ...+|++||+|+...-        .|-++..+.+|.+|+.++++.+.... +-...+.+|+
T Consensus        88 i~~~~LGis~~D~~~l---~~eV~ivih~AAtvrF--------de~l~~al~iNt~Gt~~~l~lak~~~-~l~~~vhVST  155 (467)
T KOG1221|consen   88 ISEPDLGISESDLRTL---ADEVNIVIHSAATVRF--------DEPLDVALGINTRGTRNVLQLAKEMV-KLKALVHVST  155 (467)
T ss_pred             ccCcccCCChHHHHHH---HhcCCEEEEeeeeecc--------chhhhhhhhhhhHhHHHHHHHHHHhh-hhheEEEeeh
Confidence            986541 1111 1111   1279999999997541        22367788999999999999776543 3447888887


Q ss_pred             cCcc--------CCC--------------------------------CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEE
Q 025273          148 IAGY--------QPQ--------------------------------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCV  187 (255)
Q Consensus       148 ~~~~--------~~~--------------------------------~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v  187 (255)
                      ....        .++                                ..-.-|.-+|+-.|++...-+.+    .-+.-+
T Consensus       156 Ay~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~----lPivIi  231 (467)
T KOG1221|consen  156 AYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAEN----LPLVII  231 (467)
T ss_pred             hheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccC----CCeEEE
Confidence            6543        000                                11335777777777777654443    455566


Q ss_pred             eCCcccCCccc
Q 025273          188 APGFVPTHFAE  198 (255)
Q Consensus       188 ~pg~v~t~~~~  198 (255)
                      +|+.+-+....
T Consensus       232 RPsiI~st~~E  242 (467)
T KOG1221|consen  232 RPSIITSTYKE  242 (467)
T ss_pred             cCCceeccccC
Confidence            66665544443

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.63  E-value=8e-07  Score=76.04  Aligned_cols=169  Identities=17%  Similarity=0.148  Sum_probs=102.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG-   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   88 (255)
                      .+..+|+|+||+|.+|+-+++.|.++|+.|.+.-|+.++.++... +.........+..|...+.++..   .+.+..+ 
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~---~~~~~~~~  152 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILK---KLVEAVPK  152 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhh---hhhhhccc
Confidence            456789999999999999999999999999999999888777655 11112233334445444433222   2222221 


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ...+++-++|.....   +     +..--+.+.+.|..++++++.....  .+++++||+.+....+....+..   ...
T Consensus       153 ~~~~v~~~~ggrp~~---e-----d~~~p~~VD~~g~knlvdA~~~aGv--k~~vlv~si~~~~~~~~~~~~~~---~~~  219 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPEE---E-----DIVTPEKVDYEGTKNLVDACKKAGV--KRVVLVGSIGGTKFNQPPNILLL---NGL  219 (411)
T ss_pred             cceeEEecccCCCCc---c-----cCCCcceecHHHHHHHHHHHHHhCC--ceEEEEEeecCcccCCCchhhhh---hhh
Confidence            345666666653321   1     1112235667788888888754333  38999999888766555554442   222


Q ss_pred             HHHHHHHH--HhCC-CeeEEEEeCCcccCC
Q 025273          169 GLTKALAA--EMAP-DTRVNCVAPGFVPTH  195 (255)
Q Consensus       169 ~l~~~la~--e~~~-~v~v~~v~pg~v~t~  195 (255)
                      .+...+..  .+.. ++...-|.||....+
T Consensus       220 ~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  220 VLKAKLKAEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             hhHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence            22221221  1223 777888888876554

>PRK09620 hypothetical protein; Provisional

Probab=98.51  E-value=1.9e-07  Score=74.74  Aligned_cols=83  Identities=24%  Similarity=0.282  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcCC----------------CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH
Q 025273           10 FQGKVAIVTAST----------------QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG   73 (255)
Q Consensus        10 l~~k~vlItGa~----------------~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   73 (255)
                      |+||+||||+|.                |.+|++++++|+++|+.|+++++.......   ... ....+..+..|....
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~V~s~~d~~   76 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHPFEGIIDLQ   76 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEEEecHHHHH
Confidence            479999999886                999999999999999999988764321110   000 012233333311111


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 025273           74 QQRKNLINQTIEKFGKIDVVVSNAAANP  101 (255)
Q Consensus        74 ~~v~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      +.++++++    . .++|++||+|++.+
T Consensus        77 ~~l~~~~~----~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         77 DKMKSIIT----H-EKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHHhc----c-cCCCEEEECccccc
Confidence            22222221    1 26899999999865

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.50  E-value=6.3e-07  Score=76.49  Aligned_cols=77  Identities=19%  Similarity=0.315  Sum_probs=66.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +++||.|+ |++|+.++..|++.| .+|++.+|+.+..+++.+..   +.++.++++|+.+.+++.++++       +.|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~-------~~d   70 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIK-------DFD   70 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHh-------cCC
Confidence            57999999 999999999999999 88999999988777765543   3489999999999999998887       459


Q ss_pred             EEEEcCCCC
Q 025273           92 VVVSNAAAN  100 (255)
Q Consensus        92 ~lv~~ag~~  100 (255)
                      ++||++...
T Consensus        71 ~VIn~~p~~   79 (389)
T COG1748          71 LVINAAPPF   79 (389)
T ss_pred             EEEEeCCch
Confidence            999998864

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.47  E-value=7.7e-06  Score=61.90  Aligned_cols=186  Identities=12%  Similarity=0.008  Sum_probs=112.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +++-|.||||-.|..++++..++|+.|+++.|+.++....        ..+..++.|+.+++++.+.+.       ..|+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~-------g~Da   65 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA-------GHDA   65 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhhc-------CCce
Confidence            4688999999999999999999999999999998765432        256678999999999866655       7899


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCcc----------CCCCCChhh
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGY----------QPQSSMAMY  160 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~----------~~~~~~~~y  160 (255)
                      +|..-|....       +.+  +..        ....+++...++.  ..|++.++..++.          .|..+-..|
T Consensus        66 VIsA~~~~~~-------~~~--~~~--------~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~  128 (211)
T COG2910          66 VISAFGAGAS-------DND--ELH--------SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK  128 (211)
T ss_pred             EEEeccCCCC-------Chh--HHH--------HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence            9988776431       111  111        1113444444442  3478888766553          223333445


Q ss_pred             HhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcc--ccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA--EYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ..+++.-+ +...|..+-  ++.-.-++|..+-.|-.  ..+....+.   +.....-....+-+|.|-+++--+...
T Consensus       129 ~~A~~~ae-~L~~Lr~~~--~l~WTfvSPaa~f~PGerTg~yrlggD~---ll~n~~G~SrIS~aDYAiA~lDe~E~~  200 (211)
T COG2910         129 PEALAQAE-FLDSLRAEK--SLDWTFVSPAAFFEPGERTGNYRLGGDQ---LLVNAKGESRISYADYAIAVLDELEKP  200 (211)
T ss_pred             HHHHHHHH-HHHHHhhcc--CcceEEeCcHHhcCCccccCceEeccce---EEEcCCCceeeeHHHHHHHHHHHHhcc
Confidence            55655554 334455553  46666778875544411  111111110   000011112457788888777666443

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.41  E-value=1.3e-06  Score=75.80  Aligned_cols=76  Identities=26%  Similarity=0.327  Sum_probs=60.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcC-C-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           15 AIVTASTQGIGFGIAERLGLEG-A-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |+|.|+ |.+|+.+++.|++++ . +|++.+|+.++++.+.+++  .+.++.+.++|+.+.++++++++       ..|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCE
Confidence            689999 999999999999987 4 7999999999888776655  46799999999999999888877       6799


Q ss_pred             EEEcCCCC
Q 025273           93 VVSNAAAN  100 (255)
Q Consensus        93 lv~~ag~~  100 (255)
                      +||++|..
T Consensus        71 Vin~~gp~   78 (386)
T PF03435_consen   71 VINCAGPF   78 (386)
T ss_dssp             EEE-SSGG
T ss_pred             EEECCccc
Confidence            99999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN00106 malate dehydrogenase

Probab=98.40  E-value=3.5e-06  Score=70.92  Aligned_cols=150  Identities=16%  Similarity=0.132  Sum_probs=98.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ..++|.|||++|.+|..++..|+..+.  .++++|+++.  +....++.......  ...++++.+++.+.+       .
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l-------~   85 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHINTPA--QVRGFLGDDQLGDAL-------K   85 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCCcCc--eEEEEeCCCCHHHHc-------C
Confidence            357899999999999999999997764  6999999872  22122332222211  223443333333333       3


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-------------CCCC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-------------QPQS  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-------------~~~~  155 (255)
                      ..|++|+.||....    ..   +.+++.+..|+.....+.+.+.++- .. .+++++|.-..             .+++
T Consensus        86 ~aDiVVitAG~~~~----~g---~~R~dll~~N~~i~~~i~~~i~~~~-p~-aivivvSNPvD~~~~i~t~~~~~~s~~p  156 (323)
T PLN00106         86 GADLVIIPAGVPRK----PG---MTRDDLFNINAGIVKTLCEAVAKHC-PN-ALVNIISNPVNSTVPIAAEVLKKAGVYD  156 (323)
T ss_pred             CCCEEEEeCCCCCC----CC---CCHHHHHHHHHHHHHHHHHHHHHHC-CC-eEEEEeCCCccccHHHHHHHHHHcCCCC
Confidence            79999999997542    11   2256678888888777777776654 33 44444443321             3456


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCC
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAP  180 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~  180 (255)
                      +...||.++.-...|-+.++.+++-
T Consensus       157 ~~~viG~~~LDs~Rl~~~lA~~lgv  181 (323)
T PLN00106        157 PKKLFGVTTLDVVRANTFVAEKKGL  181 (323)
T ss_pred             cceEEEEecchHHHHHHHHHHHhCC
Confidence            6778999988888899999998853

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.39  E-value=2.9e-06  Score=62.43  Aligned_cols=79  Identities=15%  Similarity=0.328  Sum_probs=59.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++++++++|.|+ ||.|++++..|++.|++ |+++.|+.++++.+.+++.  +..+.++..  .+.   .+...     
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~~--~~~---~~~~~-----   74 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIPL--EDL---EEALQ-----   74 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEEG--GGH---CHHHH-----
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceeeH--HHH---HHHHh-----
Confidence            3689999999997 99999999999999988 9999999999998888882  223444332  222   22222     


Q ss_pred             hCCCCEEEEcCCCCC
Q 025273           87 FGKIDVVVSNAAANP  101 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~  101 (255)
                        ..|++|++.+...
T Consensus        75 --~~DivI~aT~~~~   87 (135)
T PF01488_consen   75 --EADIVINATPSGM   87 (135)
T ss_dssp             --TESEEEE-SSTTS
T ss_pred             --hCCeEEEecCCCC
Confidence              7899999988643

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.33  E-value=9.4e-06  Score=68.28  Aligned_cols=149  Identities=16%  Similarity=0.119  Sum_probs=93.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++.++|+|+|++|.+|..++..|+.++  ..++++|++..  +....++.....  .....+.++..+..+.+       
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~--~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l-------   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGA--PGVAADLSHIDT--PAKVTGYADGELWEKAL-------   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCC--cccccchhhcCc--CceEEEecCCCchHHHh-------
Confidence            566799999999999999999999665  56999999432  222223322222  22334555544433333       


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc-------------cCCC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG-------------YQPQ  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~-------------~~~~  154 (255)
                      ...|++|+++|.....    .   +.+.+.+..|+.....+.+.+.++-  ..++|+++|...             ..++
T Consensus        75 ~gaDvVVitaG~~~~~----~---~tR~dll~~N~~i~~~i~~~i~~~~--~~~iviv~SNPvdv~~~~~~~~~~~~sg~  145 (321)
T PTZ00325         75 RGADLVLICAGVPRKP----G---MTRDDLFNTNAPIVRDLVAAVASSA--PKAIVGIVSNPVNSTVPIAAETLKKAGVY  145 (321)
T ss_pred             CCCCEEEECCCCCCCC----C---CCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEecCcHHHHHHHHHhhhhhccCC
Confidence            3789999999974321    1   2356678889888888887776653  236777776532             1234


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHh
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEM  178 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~  178 (255)
                      ++...||.+-.=-..|-+.++..+
T Consensus       146 p~~~viG~g~LDs~R~r~~la~~l  169 (321)
T PTZ00325        146 DPRKLFGVTTLDVVRARKFVAEAL  169 (321)
T ss_pred             ChhheeechhHHHHHHHHHHHHHh
Confidence            566678876323334555666666

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.33  E-value=2.5e-06  Score=70.79  Aligned_cols=81  Identities=19%  Similarity=0.231  Sum_probs=70.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHH----cCCeEEEEeCCchhHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGL----EGASVVVSSRKQKNVDEAVVKLKARG----IEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~----~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      -++|.||||..|..+++++.+    .|..+.+.+||++++++..+.+.+..    ....++.||.+|++++.+++++   
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence            389999999999999999998    78899999999999999988887653    2333889999999999999884   


Q ss_pred             HhCCCCEEEEcCCCCC
Q 025273           86 KFGKIDVVVSNAAANP  101 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~  101 (255)
                          -.+++||+|...
T Consensus        84 ----~~vivN~vGPyR   95 (423)
T KOG2733|consen   84 ----ARVIVNCVGPYR   95 (423)
T ss_pred             ----hEEEEeccccce
Confidence                578999999753

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.32  E-value=3.3e-06  Score=71.18  Aligned_cols=74  Identities=22%  Similarity=0.306  Sum_probs=55.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHc-C-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLE-G-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++++|+|+||||+|.||+.++++|+++ | ..++++.|+.++++.+.+++..         .|+.   .++       +.
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~-------~~  212 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLE-------EA  212 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHH-------HH
Confidence            588999999999999999999999865 5 4799999998877776655421         1222   122       23


Q ss_pred             hCCCCEEEEcCCCCC
Q 025273           87 FGKIDVVVSNAAANP  101 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~  101 (255)
                      +...|++||+++...
T Consensus       213 l~~aDiVv~~ts~~~  227 (340)
T PRK14982        213 LPEADIVVWVASMPK  227 (340)
T ss_pred             HccCCEEEECCcCCc
Confidence            447999999998643

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.31  E-value=4e-06  Score=74.32  Aligned_cols=77  Identities=23%  Similarity=0.350  Sum_probs=58.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|+++|+|+++ +|.++++.|+++|++|++++++. +..+...+++...+  +.++..|..+.            ..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~------------~~   66 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPEE------------FL   66 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcchh------------Hh
Confidence            46799999999888 99999999999999999999985 34444444554433  44666777651            12


Q ss_pred             CCCCEEEEcCCCC
Q 025273           88 GKIDVVVSNAAAN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      +.+|++|+++|..
T Consensus        67 ~~~d~vv~~~g~~   79 (450)
T PRK14106         67 EGVDLVVVSPGVP   79 (450)
T ss_pred             hcCCEEEECCCCC
Confidence            4799999999974

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.30  E-value=2e-06  Score=67.51  Aligned_cols=160  Identities=20%  Similarity=0.296  Sum_probs=102.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE-GAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~-G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +.-+|||||+-|-+|..+|+.|..+ |.. |++.+........     -+.+   -++-.|+.|-.++++.+-.     .
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V-----~~~G---PyIy~DILD~K~L~eIVVn-----~  109 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV-----TDVG---PYIYLDILDQKSLEEIVVN-----K  109 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh-----cccC---CchhhhhhccccHHHhhcc-----c
Confidence            3457999999999999999999865 755 7776655433221     1111   2344688887777766432     2


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC------------CC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ------------SS  156 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~------------~~  156 (255)
                      ++|-+||-.+.....+   +   ....-..++|+.|..++++.+..+-.   ++..-|.+++..|.            .+
T Consensus       110 RIdWL~HfSALLSAvG---E---~NVpLA~~VNI~GvHNil~vAa~~kL---~iFVPSTIGAFGPtSPRNPTPdltIQRP  180 (366)
T KOG2774|consen  110 RIDWLVHFSALLSAVG---E---TNVPLALQVNIRGVHNILQVAAKHKL---KVFVPSTIGAFGPTSPRNPTPDLTIQRP  180 (366)
T ss_pred             ccceeeeHHHHHHHhc---c---cCCceeeeecchhhhHHHHHHHHcCe---eEeecccccccCCCCCCCCCCCeeeecC
Confidence            8999999876543211   1   11223468999999999998876532   45555555555331            24


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEE-eCCcccC
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCV-APGFVPT  194 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v-~pg~v~t  194 (255)
                      ...||+||.-.+-+-..+-..+  ++.+-++ .||.+..
T Consensus       181 RTIYGVSKVHAEL~GEy~~hrF--g~dfr~~rfPg~is~  217 (366)
T KOG2774|consen  181 RTIYGVSKVHAELLGEYFNHRF--GVDFRSMRFPGIISA  217 (366)
T ss_pred             ceeechhHHHHHHHHHHHHhhc--CccceecccCccccc
Confidence            5679999998888877666655  4444444 3665543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.19  E-value=6.2e-06  Score=69.69  Aligned_cols=118  Identities=14%  Similarity=0.142  Sum_probs=68.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcC-------CeEEEEeCCchh--HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEG-------ASVVVSSRKQKN--VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      -+|+||||+|.+|.+++..|...+       ..|++++++...  ++....++...   ......|++...+..      
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~---~~~~~~~~~~~~~~~------   73 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC---AFPLLKSVVATTDPE------   73 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc---cccccCCceecCCHH------
Confidence            469999999999999999999854       589999997532  22211111100   001111332222222      


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       +.+...|++||+||....    ...+.   .+.++.|+.=.-.+.+.+.++-.+.+.++++|.
T Consensus        74 -~~l~~aDiVI~tAG~~~~----~~~~R---~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          74 -EAFKDVDVAILVGAMPRK----EGMER---KDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             -HHhCCCCEEEEeCCcCCC----CCCCH---HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence             233479999999997542    12232   445666765444455555444334567777775

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=98.06  E-value=6.6e-05  Score=62.88  Aligned_cols=79  Identities=15%  Similarity=0.278  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +|++++|+|+++++|.++++.+...|++|++++++.+..+.+. +   .+...   .+|..+.+..+.+.+...  .+.+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~~---~~~~~~~~~~~~~~~~~~--~~~~  214 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-Q---AGADA---VFNYRAEDLADRILAATA--GQGV  214 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCCE---EEeCCCcCHHHHHHHHcC--CCce
Confidence            5899999999999999999999999999999999876654432 2   22221   235544444343322211  1369


Q ss_pred             CEEEEcCC
Q 025273           91 DVVVSNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      |.+++++|
T Consensus       215 d~vi~~~~  222 (325)
T cd08253         215 DVIIEVLA  222 (325)
T ss_pred             EEEEECCc
Confidence            99999887

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.04  E-value=2.8e-05  Score=60.18  Aligned_cols=78  Identities=21%  Similarity=0.326  Sum_probs=48.6

Q ss_pred             CCCCEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH
Q 025273           10 FQGKVAIVTAS----------------TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG   73 (255)
Q Consensus        10 l~~k~vlItGa----------------~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   73 (255)
                      |+||+||||+|                ||-.|.++|++++.+|+.|+++..... ...        +..+..+  ++.+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~i--~v~sa   69 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKVI--RVESA   69 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEEE--E-SSH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceEE--Eecch
Confidence            57999999987                477899999999999999999887742 111        2233333  45555


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 025273           74 QQRKNLINQTIEKFGKIDVVVSNAAANP  101 (255)
Q Consensus        74 ~~v~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      ++   +++.+.+.++.-|++|++|++.+
T Consensus        70 ~e---m~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   70 EE---MLEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             HH---HHHHHHHHGGGGSEEEE-SB--S
T ss_pred             hh---hhhhhccccCcceeEEEecchhh
Confidence            55   44444455666799999999875

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.00  E-value=8.2e-05  Score=56.06  Aligned_cols=158  Identities=16%  Similarity=0.082  Sum_probs=97.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++++.++|.||+|-.|+.+.+++++++.  +|+++.|.......       .+..+.....|....++..+.+      
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a-------t~k~v~q~~vDf~Kl~~~a~~~------   81 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA-------TDKVVAQVEVDFSKLSQLATNE------   81 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc-------ccceeeeEEechHHHHHHHhhh------
Confidence            35678899999999999999999999984  49999988532221       1235555667777666544433      


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                       ..+|+++++-|-.......+.     +   +.+.-.-.+.+.+.+-.  +.-..++.+||..+....  ...|--.|.-
T Consensus        82 -qg~dV~FcaLgTTRgkaGadg-----f---ykvDhDyvl~~A~~AKe--~Gck~fvLvSS~GAd~sS--rFlY~k~KGE  148 (238)
T KOG4039|consen   82 -QGPDVLFCALGTTRGKAGADG-----F---YKVDHDYVLQLAQAAKE--KGCKTFVLVSSAGADPSS--RFLYMKMKGE  148 (238)
T ss_pred             -cCCceEEEeecccccccccCc-----e---EeechHHHHHHHHHHHh--CCCeEEEEEeccCCCccc--ceeeeeccch
Confidence             389999999887542211111     1   11111112223333221  112378889998876443  4567778877


Q ss_pred             HHHHHHHHHHHhCCCeeEEEEeCCcccCCcc
Q 025273          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (255)
Q Consensus       167 ~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~  197 (255)
                      ++.=+-.|--+     ++.-+.||++...-.
T Consensus       149 vE~~v~eL~F~-----~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  149 VERDVIELDFK-----HIIILRPGPLLGERT  174 (238)
T ss_pred             hhhhhhhcccc-----EEEEecCcceecccc
Confidence            77544332222     677889999866433

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.95  E-value=0.00017  Score=61.12  Aligned_cols=101  Identities=21%  Similarity=0.391  Sum_probs=67.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C-C
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G-K   89 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g-~   89 (255)
                      |.+|||+||+||+|...++.....|+.++++..++++.+ ..+++   +....   .|..+.+    +.+++++.. | .
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l---GAd~v---i~y~~~~----~~~~v~~~t~g~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL---GADHV---INYREED----FVEQVRELTGGKG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc---CCCEE---EcCCccc----HHHHHHHHcCCCC
Confidence            899999999999999999999899977777766665544 33333   33222   2333332    444554444 3 5


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      +|+++...|...                           ....+..++++|+++.++...+
T Consensus       212 vDvv~D~vG~~~---------------------------~~~~l~~l~~~G~lv~ig~~~g  245 (326)
T COG0604         212 VDVVLDTVGGDT---------------------------FAASLAALAPGGRLVSIGALSG  245 (326)
T ss_pred             ceEEEECCCHHH---------------------------HHHHHHHhccCCEEEEEecCCC
Confidence            999999988421                           1113456677899999988765

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.95  E-value=6.4e-05  Score=56.47  Aligned_cols=77  Identities=14%  Similarity=0.281  Sum_probs=56.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++++++|+|+ |++|+++++.|++.| ..|++++|+.+..+...+++....     +..+..+.++.          .
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~   79 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------L   79 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------c
Confidence            367899999998 899999999999996 779999999887777666654221     22233333322          2


Q ss_pred             CCCCEEEEcCCCCC
Q 025273           88 GKIDVVVSNAAANP  101 (255)
Q Consensus        88 g~~d~lv~~ag~~~  101 (255)
                      ...|++|++.....
T Consensus        80 ~~~Dvvi~~~~~~~   93 (155)
T cd01065          80 AEADLIINTTPVGM   93 (155)
T ss_pred             ccCCEEEeCcCCCC
Confidence            37899999987644

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.94  E-value=5.1e-05  Score=62.88  Aligned_cols=76  Identities=17%  Similarity=0.294  Sum_probs=55.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|+++|+|+ ||+|++++..|+..| .+|++++|+.++++.+.+++.... .+.   .++    +..       +..
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~----~~~-------~~~  183 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAE---LDL----ELQ-------EEL  183 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-cee---ecc----cch-------hcc
Confidence            578899999997 899999999999999 679999999988888777664321 111   111    111       112


Q ss_pred             CCCCEEEEcCCCC
Q 025273           88 GKIDVVVSNAAAN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      ...|++||+....
T Consensus       184 ~~~DivInaTp~g  196 (278)
T PRK00258        184 ADFDLIINATSAG  196 (278)
T ss_pred             ccCCEEEECCcCC
Confidence            3689999998754

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.92  E-value=2.6e-05  Score=69.11  Aligned_cols=78  Identities=24%  Similarity=0.314  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|+++|||+++ +|.++++.|+++|++|++.+++........+++...+.++..  .+  +...+   .+      ..
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~--~~--~~~~~---~~------~~   68 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVIC--GS--HPLEL---LD------ED   68 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEe--CC--CCHHH---hc------Cc
Confidence            6799999999986 999999999999999999998765444444455444433321  11  11111   11      14


Q ss_pred             CCEEEEcCCCCC
Q 025273           90 IDVVVSNAAANP  101 (255)
Q Consensus        90 ~d~lv~~ag~~~  101 (255)
                      +|++|+++|+..
T Consensus        69 ~d~vV~s~gi~~   80 (447)
T PRK02472         69 FDLMVKNPGIPY   80 (447)
T ss_pred             CCEEEECCCCCC
Confidence            899999999753

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.92  E-value=0.00019  Score=60.67  Aligned_cols=105  Identities=21%  Similarity=0.311  Sum_probs=71.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ..+++++|+|+++++|.++++.+...|++|++++++.+..+.+ ..   .+..   ...|..+.+..+.+.+...  .+.
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~~~~---~~~~~~~~~~~~~~~~~~~--~~~  235 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KE---LGAD---YVIDYRKEDFVREVRELTG--KRG  235 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCC---eEEecCChHHHHHHHHHhC--CCC
Confidence            3578999999999999999999999999999999887665443 22   2222   1236655555554443322  136


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      +|++++++|..            .++.               .++.++++|+++++++...
T Consensus       236 ~d~~i~~~g~~------------~~~~---------------~~~~l~~~G~~v~~~~~~~  269 (342)
T cd08266         236 VDVVVEHVGAA------------TWEK---------------SLKSLARGGRLVTCGATTG  269 (342)
T ss_pred             CcEEEECCcHH------------HHHH---------------HHHHhhcCCEEEEEecCCC
Confidence            99999998731            1222               2345567789999987654

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.87  E-value=0.00024  Score=61.23  Aligned_cols=77  Identities=12%  Similarity=0.142  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +.+++++|.|+ |.+|+..++.+.+.|++|++++|+.++++.+...+   +..   +..+..+.+.+.+.+       ..
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~---v~~~~~~~~~l~~~l-------~~  230 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGR---IHTRYSNAYEIEDAV-------KR  230 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Cce---eEeccCCHHHHHHHH-------cc
Confidence            56788999987 78999999999999999999999987666544333   111   223445555544443       36


Q ss_pred             CCEEEEcCCCC
Q 025273           90 IDVVVSNAAAN  100 (255)
Q Consensus        90 ~d~lv~~ag~~  100 (255)
                      .|++|+++++.
T Consensus       231 aDvVI~a~~~~  241 (370)
T TIGR00518       231 ADLLIGAVLIP  241 (370)
T ss_pred             CCEEEEccccC
Confidence            89999998763

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.86  E-value=0.00014  Score=61.85  Aligned_cols=104  Identities=18%  Similarity=0.266  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|.++||+|++|++|..+++.+...|++|+.++++.++.+.+++.+   +....   .|-.+.+...+.+.+...  +.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~v---i~~~~~~~~~~~i~~~~~--~gv  222 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDDA---FNYKEEPDLDAALKRYFP--NGI  222 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCcee---EEcCCcccHHHHHHHhCC--CCc
Confidence            5789999999999999999888889999999998877655554323   22211   232222233332332211  368


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |+++.+.|. .                          .....++.++++|+++.++...
T Consensus       223 d~v~d~~g~-~--------------------------~~~~~~~~l~~~G~iv~~G~~~  254 (338)
T cd08295         223 DIYFDNVGG-K--------------------------MLDAVLLNMNLHGRIAACGMIS  254 (338)
T ss_pred             EEEEECCCH-H--------------------------HHHHHHHHhccCcEEEEecccc
Confidence            999988773 1                          1223456677889999887543

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.85  E-value=0.00021  Score=60.05  Aligned_cols=97  Identities=20%  Similarity=0.328  Sum_probs=69.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|+|+|++ |+|...++.....|++|++++|++++++..++ +   +....   .|-++++..+.+-+       ..
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l---GAd~~---i~~~~~~~~~~~~~-------~~  230 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L---GADHV---INSSDSDALEAVKE-------IA  230 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h---CCcEE---EEcCCchhhHHhHh-------hC
Confidence            48999999999 99999988888899999999999988765433 2   22333   24444444444332       28


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |+++.+++ ..                          .+...++.++++|+++.++-..
T Consensus       231 d~ii~tv~-~~--------------------------~~~~~l~~l~~~G~~v~vG~~~  262 (339)
T COG1064         231 DAIIDTVG-PA--------------------------TLEPSLKALRRGGTLVLVGLPG  262 (339)
T ss_pred             cEEEECCC-hh--------------------------hHHHHHHHHhcCCEEEEECCCC
Confidence            99999988 32                          1222456778899999998653

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.85  E-value=0.00048  Score=57.30  Aligned_cols=98  Identities=21%  Similarity=0.293  Sum_probs=64.8

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++.|++++|+|. |++|+++++.|...|++|++.+|+.+..+...    ..+..  .  .   ..+++.+.       .
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~----~~g~~--~--~---~~~~l~~~-------l  207 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT----EMGLI--P--F---PLNKLEEK-------V  207 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HCCCe--e--e---cHHHHHHH-------h
Confidence            3578999999998 66999999999999999999999976544322    11211  1  1   12223322       2


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      ...|++|++....                .          +.+..++.|+++..++.++|.-+
T Consensus       208 ~~aDiVint~P~~----------------i----------i~~~~l~~~k~~aliIDlas~Pg  244 (287)
T TIGR02853       208 AEIDIVINTIPAL----------------V----------LTADVLSKLPKHAVIIDLASKPG  244 (287)
T ss_pred             ccCCEEEECCChH----------------H----------hCHHHHhcCCCCeEEEEeCcCCC
Confidence            3789999976321                0          11223456777778998988543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.83  E-value=0.00013  Score=60.14  Aligned_cols=75  Identities=15%  Similarity=0.311  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .++|+++|+|+ ||+|++++..|++.|++|++++|+.++++.+.+++...+ .......|     +   .      ....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~-~~~~~~~~-----~---~------~~~~  178 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG-EIQAFSMD-----E---L------PLHR  178 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC-ceEEechh-----h---h------cccC
Confidence            45889999998 699999999999999999999999888888777765432 22221111     1   0      1236


Q ss_pred             CCEEEEcCCCC
Q 025273           90 IDVVVSNAAAN  100 (255)
Q Consensus        90 ~d~lv~~ag~~  100 (255)
                      .|++||+.+..
T Consensus       179 ~DivInatp~g  189 (270)
T TIGR00507       179 VDLIINATSAG  189 (270)
T ss_pred             ccEEEECCCCC
Confidence            89999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.81  E-value=0.00029  Score=60.39  Aligned_cols=104  Identities=18%  Similarity=0.271  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|.+|||+|++|++|..+++.+...|++|+.++++.++.+.+++++   +....   .|-.+.+...+.+.+..  -+.+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~v---i~~~~~~~~~~~i~~~~--~~gv  229 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEA---FNYKEEPDLDAALKRYF--PEGI  229 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCEE---EECCCcccHHHHHHHHC--CCCc
Confidence            4789999999999999999888889999999988877655443333   32222   23222222333232221  1368


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |+++.+.|..                           .....+..++++|+++.++...
T Consensus       230 D~v~d~vG~~---------------------------~~~~~~~~l~~~G~iv~~G~~~  261 (348)
T PLN03154        230 DIYFDNVGGD---------------------------MLDAALLNMKIHGRIAVCGMVS  261 (348)
T ss_pred             EEEEECCCHH---------------------------HHHHHHHHhccCCEEEEECccc
Confidence            9999987731                           1123445667889999887543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.73  E-value=5.6e-05  Score=59.44  Aligned_cols=48  Identities=27%  Similarity=0.410  Sum_probs=41.5

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK   55 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (255)
                      ..+++||+++|+|.+ .+|+.+++.|.+.|++|++++++.+.++.+.+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            346889999999985 899999999999999999999998776666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd00704 MDH Malate dehydrogenase

Probab=97.73  E-value=0.0003  Score=59.48  Aligned_cols=112  Identities=15%  Similarity=0.133  Sum_probs=67.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEeCCc--hhHHHHHHHHHhcCCeEEEEEecCCCHH--HHH--HHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQ--QRK--NLI   80 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~--~v~--~~~   80 (255)
                      +|.||||+|.+|..++..|+..|.       .++++|++.  +.++              ....|+.+..  ...  ...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~--------------g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE--------------GVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc--------------eeeeehhhhcccccCCcEEe
Confidence            589999999999999999997652       499999986  3322              2334444331  000  000


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ....+.+...|++|+.||....    ...+   -.+.+..|..=.-.+...+.++-.+.+.++++|
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~----~g~t---R~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRK----PGME---RADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCC----cCCc---HHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            1222344589999999997532    1223   334556666555555554444433456677776

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.73  E-value=0.00067  Score=70.96  Aligned_cols=174  Identities=21%  Similarity=0.132  Sum_probs=110.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +.++.++|++.+++++.+++++|.++|++|+++.....    ..+........+..+.+.-.+.+++..+++.+....+.
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1828 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV----VSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQ 1828 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc----ccccccccccccccccccccchHHHHHHHHhhhccccc
Confidence            45788999988999999999999999999887742211    00000001112223345555677888888888777778


Q ss_pred             CCEEEEcCCCCCCCC-CccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhh------
Q 025273           90 IDVVVSNAAANPSVD-SILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMY------  160 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y------  160 (255)
                      ++.+||..+...... .....   .+...-...+...|.+.+.+.+.+.  .+..++.++...|..++......      
T Consensus      1829 ~~g~i~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~ 1905 (2582)
T TIGR02813      1829 IDGFIHLQPQHKSVADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQV 1905 (2582)
T ss_pred             cceEEEecccccccccccccc---ccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccccccc
Confidence            999999887543100 00011   1111112334456777777665543  44578888877665554332221      


Q ss_pred             --HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCC
Q 025273          161 --GVTKTALLGLTKALAAEMAP-DTRVNCVAPG  190 (255)
Q Consensus       161 --~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg  190 (255)
                        ....+++.+|+|++++|+.. .+|...+.|.
T Consensus      1906 ~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1906 KAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             ccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence              23578999999999999987 7788888775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.71  E-value=0.00043  Score=58.59  Aligned_cols=103  Identities=16%  Similarity=0.219  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|.+|||+|++|++|..+++.+...|++|+.++++.++.+.+. +   .+....+   |-.+.+...+.++...  -+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~---lGa~~vi---~~~~~~~~~~~~~~~~--~~gv  208 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-K---LGFDVAF---NYKTVKSLEETLKKAS--PDGY  208 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCCEEE---eccccccHHHHHHHhC--CCCe
Confidence            5789999999999999999888888999999998876655442 2   2332222   3222223333333321  1368


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |+++.+.|..                           .....+..++++|+++.++...
T Consensus       209 dvv~d~~G~~---------------------------~~~~~~~~l~~~G~iv~~G~~~  240 (325)
T TIGR02825       209 DCYFDNVGGE---------------------------FSNTVIGQMKKFGRIAICGAIS  240 (325)
T ss_pred             EEEEECCCHH---------------------------HHHHHHHHhCcCcEEEEecchh
Confidence            9999887731                           1123345667889999987643

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.70  E-value=0.00015  Score=60.03  Aligned_cols=78  Identities=21%  Similarity=0.184  Sum_probs=63.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ....+|-||+|..|.-++++|+++|.+.++.+|+..++..+.+++   +.....+.+++  +..+++.++       ..+
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~-------~~~   73 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS-------RTQ   73 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHHh-------cce
Confidence            456899999999999999999999999999999999999887776   34444455554  555555554       789


Q ss_pred             EEEEcCCCCC
Q 025273           92 VVVSNAAANP  101 (255)
Q Consensus        92 ~lv~~ag~~~  101 (255)
                      +|+||+|...
T Consensus        74 VVlncvGPyt   83 (382)
T COG3268          74 VVLNCVGPYT   83 (382)
T ss_pred             EEEecccccc
Confidence            9999999764

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.69  E-value=0.0004  Score=58.72  Aligned_cols=115  Identities=15%  Similarity=0.100  Sum_probs=69.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC-------eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHH--HH--HHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRK--NL--INQ   82 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~--~~--~~~   82 (255)
                      +|.|+|++|.+|.+++..|...+.       .++++|++++..            .......|+.+.....  ..  ...
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            478999999999999999998653       599999975431            1222344555443110  00  001


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      ..+.+...|++|+.||....    ...   .+.+.+..|+.=.-.+.+.+.++-.+.+.++++|.
T Consensus        69 ~~~~~~~aDiVVitAG~~~~----~~~---tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPRK----EGM---ERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCCC----CCC---cHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            12344589999999997532    122   24556667765555555555444334566777764

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.69  E-value=0.0007  Score=56.24  Aligned_cols=76  Identities=13%  Similarity=0.069  Sum_probs=55.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|+|+|.|+ ||.|++++..|++.|+ +|++++|+.++.+.+.+.+........+...     +++.+       .+
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~-------~~  190 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAA-------AL  190 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHh-------hh
Confidence            467899999997 7799999999999998 5999999999998888877554322222211     11111       12


Q ss_pred             CCCCEEEEcC
Q 025273           88 GKIDVVVSNA   97 (255)
Q Consensus        88 g~~d~lv~~a   97 (255)
                      ...|++||+.
T Consensus       191 ~~aDiVInaT  200 (284)
T PRK12549        191 AAADGLVHAT  200 (284)
T ss_pred             CCCCEEEECC
Confidence            3689999994

>PRK06849 hypothetical protein; Provisional

Probab=97.65  E-value=0.00066  Score=59.08  Aligned_cols=83  Identities=8%  Similarity=0.125  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +.|+|||||++..+|..+++.|.++|++|++++.+..........+    .....+...-.+.+...+.+.++.++. ++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~----d~~~~~p~p~~d~~~~~~~L~~i~~~~-~i   77 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV----DGFYTIPSPRWDPDAYIQALLSIVQRE-NI   77 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh----hheEEeCCCCCCHHHHHHHHHHHHHHc-CC
Confidence            3689999999999999999999999999999999865543222212    122223222334444444444555554 58


Q ss_pred             CEEEEcCC
Q 025273           91 DVVVSNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      |++|-...
T Consensus        78 d~vIP~~e   85 (389)
T PRK06849         78 DLLIPTCE   85 (389)
T ss_pred             CEEEECCh
Confidence            99997665

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.64  E-value=0.0006  Score=58.08  Aligned_cols=100  Identities=14%  Similarity=0.186  Sum_probs=64.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      .+|||+||+|++|..+++.+...|+ +|+.+++++++.+.+.+++   +....   .|-.+ +++.+.+.++..  +.+|
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~v---i~~~~-~~~~~~i~~~~~--~gvd  226 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDAA---INYKT-DNVAERLRELCP--EGVD  226 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcEE---EECCC-CCHHHHHHHHCC--CCce
Confidence            8999999999999999988888898 7999988877655544433   32222   22222 222222332211  3699


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      +++.+.|...                           ....+..++++|+++.++..
T Consensus       227 ~vid~~g~~~---------------------------~~~~~~~l~~~G~iv~~G~~  256 (345)
T cd08293         227 VYFDNVGGEI---------------------------SDTVISQMNENSHIILCGQI  256 (345)
T ss_pred             EEEECCCcHH---------------------------HHHHHHHhccCCEEEEEeee
Confidence            9999877310                           12234566788999988753

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.62  E-value=0.00078  Score=56.32  Aligned_cols=97  Identities=23%  Similarity=0.363  Sum_probs=64.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++.+++++|.|. |++|+.+++.|.+.|++|++++|+.+..+..    ...+.+.  +  +   .+++.       +...
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~----~~~G~~~--~--~---~~~l~-------~~l~  209 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARI----TEMGLSP--F--H---LSELA-------EEVG  209 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHcCCee--e--c---HHHHH-------HHhC
Confidence            467999999997 6799999999999999999999997653332    2223221  1  1   12222       2234


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      ..|++|++....                          .+.+..+..|+++..|+.+++..+
T Consensus       210 ~aDiVI~t~p~~--------------------------~i~~~~l~~~~~g~vIIDla~~pg  245 (296)
T PRK08306        210 KIDIIFNTIPAL--------------------------VLTKEVLSKMPPEALIIDLASKPG  245 (296)
T ss_pred             CCCEEEECCChh--------------------------hhhHHHHHcCCCCcEEEEEccCCC
Confidence            789999975310                          123345567778888888887653

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.62  E-value=0.00065  Score=57.78  Aligned_cols=81  Identities=19%  Similarity=0.350  Sum_probs=58.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCc---------------------hhHHHHHHHHHhc--CCeEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ---------------------KNVDEAVVKLKAR--GIEVI   64 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~---------------------~~~~~~~~~~~~~--~~~~~   64 (255)
                      .|++++|+|.|+ ||+|.++++.|++.|. +++++|++.                     .+.+.+++.+.+.  ..++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            477899999997 7799999999999997 699999874                     2344445555544  34666


Q ss_pred             EEEecCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           65 GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        65 ~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      .+..|++ .+.++++++       ..|++|.+..
T Consensus       100 ~~~~~~~-~~~~~~~~~-------~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVT-VEELEELVK-------EVDLIIDATD  125 (338)
T ss_pred             EEeccCC-HHHHHHHhc-------CCCEEEEcCC
Confidence            6777776 344554433       6899987754

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.61  E-value=0.00041  Score=56.81  Aligned_cols=108  Identities=19%  Similarity=0.240  Sum_probs=77.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG-   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   88 (255)
                      -.|.+++|++|+|.+|.-+.+--.-+|++|+.+.-..++..-+.+++.   ...   -.|-..+    ++.+.+.+.++ 
T Consensus       149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG---fD~---~idyk~~----d~~~~L~~a~P~  218 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG---FDA---GIDYKAE----DFAQALKEACPK  218 (340)
T ss_pred             CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC---Cce---eeecCcc----cHHHHHHHHCCC
Confidence            358999999999999988776666789999999988887666555442   111   1233333    45555556664 


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ  154 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~  154 (255)
                      .+|+.+-|.|..                           ++.+.+++|+..+||+..+-++.|+..
T Consensus       219 GIDvyfeNVGg~---------------------------v~DAv~~~ln~~aRi~~CG~IS~YN~~  257 (340)
T COG2130         219 GIDVYFENVGGE---------------------------VLDAVLPLLNLFARIPVCGAISQYNAP  257 (340)
T ss_pred             CeEEEEEcCCch---------------------------HHHHHHHhhccccceeeeeehhhcCCC
Confidence            799999999852                           344567888888999998888777643

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.61  E-value=0.00094  Score=56.45  Aligned_cols=152  Identities=12%  Similarity=0.064  Sum_probs=92.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEeCCchh--HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQKN--VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      .++|.|+|++|.+|..++..|+..|.       .++++|++++.  ++....++..... ...-.+.++.  ..      
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~-~~~~~~~i~~--~~------   72 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAF-PLLAEIVITD--DP------   72 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccc-cccCceEEec--Cc------
Confidence            46899999999999999999998875       69999996443  4443333332110 0000011110  00      


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc--------cCC-
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--------YQP-  153 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~--------~~~-  153 (255)
                       .+.+..-|++|.+||....    ...+.   .+.+..|+.=.-.+...+.++-.+.+.++++|-..-        ..+ 
T Consensus        73 -~~~~~daDivvitaG~~~k----~g~tR---~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~  144 (322)
T cd01338          73 -NVAFKDADWALLVGAKPRG----PGMER---ADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPD  144 (322)
T ss_pred             -HHHhCCCCEEEEeCCCCCC----CCCcH---HHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCC
Confidence             1223478999999997532    22333   334556654444444444433323567777764321        132 


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCC
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAP  180 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~  180 (255)
                      .+....|+.++.--..|.+.+++.++.
T Consensus       145 ~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         145 IPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             CChHheEEehHHHHHHHHHHHHHHhCc
Confidence            566778999999999999999999854

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.61  E-value=0.0021  Score=57.41  Aligned_cols=112  Identities=14%  Similarity=0.174  Sum_probs=73.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH-------------HHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-------------QQR   76 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-------------~~v   76 (255)
                      ..+.+|+|+|+ |.+|...+..+...|+.|+++|+++++++...+    .+.+...  .|..+.             +..
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes----lGA~~v~--i~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES----MGAEFLE--LDFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeEEE--eccccccccccchhhhcchhHH
Confidence            45889999985 789999999999999999999999877664432    3444332  233221             111


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           77 KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      +...+.+.+..+..|++|.++|......                    +..+.+..+..|++++.|+.++..
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~pg~~a--------------------P~lit~~~v~~mkpGgvIVdvg~~  287 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALIPGKPA--------------------PKLITAEMVASMKPGSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCCCcccC--------------------cchHHHHHHHhcCCCCEEEEEccC
Confidence            1111222222347999999999754211                    222345677888999999999863

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=97.60  E-value=0.00067  Score=57.92  Aligned_cols=99  Identities=17%  Similarity=0.219  Sum_probs=64.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+|++|+|+|+ |++|...++.+...|+ +|+++++++++++.++ ++   +....   .|..+ +++.+    +.+..+
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~-~~~~~----~~~~~g  234 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM---GADKL---VNPQN-DDLDH----YKAEKG  234 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc---CCcEE---ecCCc-ccHHH----HhccCC
Confidence            35899999986 8999999988888898 5888999877765432 23   33322   24333 22222    222234


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .+|+++.++|...                          ..+.+++.++++|+++.++.
T Consensus       235 ~~D~vid~~G~~~--------------------------~~~~~~~~l~~~G~iv~~G~  267 (343)
T PRK09880        235 YFDVSFEVSGHPS--------------------------SINTCLEVTRAKGVMVQVGM  267 (343)
T ss_pred             CCCEEEECCCCHH--------------------------HHHHHHHHhhcCCEEEEEcc
Confidence            6999999988311                          11223455678899999874

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.60  E-value=0.00064  Score=56.39  Aligned_cols=81  Identities=14%  Similarity=0.105  Sum_probs=55.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|+++|.|+ ||-+++++..|++.|+ +|+++.|+.++++.+.+.+............|   ........       
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~-------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVI-------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHH-------
Confidence            366899999997 8899999999999997 59999999998888877765332111111122   11221111       


Q ss_pred             CCCCEEEEcCCCC
Q 025273           88 GKIDVVVSNAAAN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      ...|++||+....
T Consensus       193 ~~~divINaTp~G  205 (283)
T PRK14027        193 AAADGVVNATPMG  205 (283)
T ss_pred             hhcCEEEEcCCCC
Confidence            2589999997654

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.60  E-value=0.002  Score=57.48  Aligned_cols=113  Identities=12%  Similarity=0.127  Sum_probs=74.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-------------HHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-------------GQQR   76 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-------------~~~v   76 (255)
                      ..+.+++|.|+ |.+|...++.+...|+.|++++++.+.++..++ +   +.+  ++..|..+             .+..
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---Ga~--~v~v~~~e~g~~~~gYa~~~s~~~~  234 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---GAE--FLELDFKEEGGSGDGYAKVMSEEFI  234 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCe--EEeccccccccccccceeecCHHHH
Confidence            45679999995 999999999999999999999999876554332 2   322  33344321             2333


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           77 KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      +...+.+.+.....|++|+++-+.....                    +..+.+..+..|++++.||.+++-.
T Consensus       235 ~~~~~~~~e~~~~~DIVI~TalipG~~a--------------------P~Lit~emv~~MKpGsvIVDlA~d~  287 (511)
T TIGR00561       235 AAEMELFAAQAKEVDIIITTALIPGKPA--------------------PKLITEEMVDSMKAGSVIVDLAAEQ  287 (511)
T ss_pred             HHHHHHHHHHhCCCCEEEECcccCCCCC--------------------CeeehHHHHhhCCCCCEEEEeeeCC
Confidence            3333444444568999999995433211                    1223444567788888888887654

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.58  E-value=0.00048  Score=57.17  Aligned_cols=79  Identities=16%  Similarity=0.154  Sum_probs=55.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|+++.|+.++++.+.+++.... .+.    .+...+++..       ..
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~----~~~~~~~~~~-------~~  188 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VIT----RLEGDSGGLA-------IE  188 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cce----eccchhhhhh-------cc
Confidence            367899999976 8999999999999997 59999999988888877664321 111    1111122211       12


Q ss_pred             CCCCEEEEcCCCC
Q 025273           88 GKIDVVVSNAAAN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      ...|++||+....
T Consensus       189 ~~~DiVInaTp~g  201 (282)
T TIGR01809       189 KAAEVLVSTVPAD  201 (282)
T ss_pred             cCCCEEEECCCCC
Confidence            3689999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.57  E-value=0.003  Score=46.77  Aligned_cols=114  Identities=13%  Similarity=0.164  Sum_probs=72.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+|.|+|++|.+|.+++..|...+.  +++++|++++.++....++...   ...-..+..  .+.+.           +
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~-----------~   67 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEA-----------L   67 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGG-----------G
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--ccccc-----------c
Confidence            3689999999999999999999874  5999999988777766666443   212222222  22333           2


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      ..-|++|..+|....    ...+.   .+.++.|..-.-.+.+.+.++- +.+.++.++.
T Consensus        68 ~~aDivvitag~~~~----~g~sR---~~ll~~N~~i~~~~~~~i~~~~-p~~~vivvtN  119 (141)
T PF00056_consen   68 KDADIVVITAGVPRK----PGMSR---LDLLEANAKIVKEIAKKIAKYA-PDAIVIVVTN  119 (141)
T ss_dssp             TTESEEEETTSTSSS----TTSSH---HHHHHHHHHHHHHHHHHHHHHS-TTSEEEE-SS
T ss_pred             ccccEEEEecccccc----ccccH---HHHHHHhHhHHHHHHHHHHHhC-CccEEEEeCC
Confidence            368999999997432    22332   3345566554444444444432 5567777753

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.57  E-value=0.0014  Score=53.41  Aligned_cols=104  Identities=22%  Similarity=0.324  Sum_probs=68.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .++.++||+|+++ +|.++++.+...|.+|++++++.+..+.+ ++   .+...   ..|..+.+..+.+.   ....+.
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~---~~~~~~~~~~~~~~---~~~~~~  201 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KE---LGADH---VIDYKEEDLEEELR---LTGGGG  201 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HH---hCCce---eccCCcCCHHHHHH---HhcCCC
Confidence            3578999999999 99999999999999999999987654443 22   22221   12333333333322   122347


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      +|+++++++..                          ...+..++.++++|+++.++....
T Consensus       202 ~d~vi~~~~~~--------------------------~~~~~~~~~l~~~G~~v~~~~~~~  236 (271)
T cd05188         202 ADVVIDAVGGP--------------------------ETLAQALRLLRPGGRIVVVGGTSG  236 (271)
T ss_pred             CCEEEECCCCH--------------------------HHHHHHHHhcccCCEEEEEccCCC
Confidence            99999998741                          123344566678899999887654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.57  E-value=0.00043  Score=53.43  Aligned_cols=98  Identities=19%  Similarity=0.219  Sum_probs=64.2

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ...+.|+++.|.|. |.||+++++.|...|++|+..+|.........    ..  .+   .     ..+++++++     
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~----~~--~~---~-----~~~l~ell~-----   90 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD----EF--GV---E-----YVSLDELLA-----   90 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH----HT--TE---E-----ESSHHHHHH-----
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcc----cc--cc---e-----eeehhhhcc-----
Confidence            34689999999975 89999999999999999999999987644111    11  11   1     224555555     


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                        .-|+++++.......  ..-                   +....+..|+++..+||++-
T Consensus        91 --~aDiv~~~~plt~~T--~~l-------------------i~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen   91 --QADIVSLHLPLTPET--RGL-------------------INAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             --H-SEEEE-SSSSTTT--TTS-------------------BSHHHHHTSTTTEEEEESSS
T ss_pred             --hhhhhhhhhcccccc--cee-------------------eeeeeeeccccceEEEeccc
Confidence              469988887654321  112                   22335677888888998874

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK14968 putative methyltransferase; Provisional

Probab=97.56  E-value=0.0014  Score=50.77  Aligned_cols=122  Identities=19%  Similarity=0.177  Sum_probs=74.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCe---EEEEEecCCCHHHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---VIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++++|-.|++.|.   ++..+++++.+|+.++++++..+...+.+...+.+   +.++.+|+.+..     .    + 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~----~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF-----R----G-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc-----c----c-
Confidence            367889999987665   55666666899999999988877776666544322   788888875421     1    1 


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHH---HHHHHHHHhhcccCCCeEEEEcc
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS---SILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~---~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       +.+|.++.|..+... .+.... .+.+...+.....+   .-.+++.+.+.|+++|.++++.+
T Consensus        89 -~~~d~vi~n~p~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~gG~~~~~~~  149 (188)
T PRK14968         89 -DKFDVILFNPPYLPT-EEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKPGGRILLLQS  149 (188)
T ss_pred             -cCceEEEECCCcCCC-Cchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence             168999998776542 111111 11122222111111   22356667778888888776643

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.53  E-value=0.0019  Score=54.42  Aligned_cols=75  Identities=21%  Similarity=0.333  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .+.+++|+|+++++|.++++.+...|+.|+++.++.+..+.+    ...+....   .|.   ++..+   .+. ....+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~~~~~~---~~~---~~~~~---~~~-~~~~~  227 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KELGADYV---IDG---SKFSE---DVK-KLGGA  227 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHcCCcEE---Eec---HHHHH---HHH-hccCC
Confidence            478999999999999999999999999999998887654443    22222111   122   11222   222 22369


Q ss_pred             CEEEEcCCC
Q 025273           91 DVVVSNAAA   99 (255)
Q Consensus        91 d~lv~~ag~   99 (255)
                      |++++++|.
T Consensus       228 d~v~~~~g~  236 (332)
T cd08259         228 DVVIELVGS  236 (332)
T ss_pred             CEEEECCCh
Confidence            999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.51  E-value=0.00029  Score=57.44  Aligned_cols=75  Identities=15%  Similarity=0.236  Sum_probs=56.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +++||+|||+- |+.+++.|.++|+.|+.+.++....+.+.+    .  ....+..+..+.+++.+++++-     ++|+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~--g~~~v~~g~l~~~~l~~~l~~~-----~i~~   68 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----H--QALTVHTGALDPQELREFLKRH-----SIDI   68 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----c--CCceEEECCCCHHHHHHHHHhc-----CCCE
Confidence            46999999998 999999999999999999988765433221    1  1223456777888877776643     7999


Q ss_pred             EEEcCCC
Q 025273           93 VVSNAAA   99 (255)
Q Consensus        93 lv~~ag~   99 (255)
                      +|+.+-.
T Consensus        69 VIDAtHP   75 (256)
T TIGR00715        69 LVDATHP   75 (256)
T ss_pred             EEEcCCH
Confidence            9998764

This enzyme was found to be a monomer by gel filtration.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.50  E-value=0.00023  Score=64.22  Aligned_cols=47  Identities=26%  Similarity=0.362  Sum_probs=41.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (255)
                      ++++|+++|+|+ ||+|++++..|+++|++|++++|+.++++.+.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            477899999999 69999999999999999999999988777776654

>PRK05086 malate dehydrogenase; Provisional

Probab=97.48  E-value=0.00093  Score=56.26  Aligned_cols=115  Identities=17%  Similarity=0.170  Sum_probs=64.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHH-c--CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGL-E--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~-~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++++|.||+|++|++++..|.. .  +..+++++|++. .+...-++... .....+..  .+.+++.       +.+..
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~-~~~~~i~~--~~~~d~~-------~~l~~   69 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI-PTAVKIKG--FSGEDPT-------PALEG   69 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC-CCCceEEE--eCCCCHH-------HHcCC
Confidence            5799999999999999998865 2  456888998743 22111122111 11111121  1111111       22236


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      .|++|.++|.....    ..+   -...+..|....-.+.+.+.++ ...+.++++|
T Consensus        70 ~DiVIitaG~~~~~----~~~---R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvs  118 (312)
T PRK05086         70 ADVVLISAGVARKP----GMD---RSDLFNVNAGIVKNLVEKVAKT-CPKACIGIIT  118 (312)
T ss_pred             CCEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence            99999999975421    122   3445677776666666666554 2333444444

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.46  E-value=0.00053  Score=59.87  Aligned_cols=75  Identities=7%  Similarity=0.127  Sum_probs=54.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|+++|.|+ |++|+.+++.|++.|. .++++.|+.++++.+.+++..    ...     ...+++.       +.+
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~----~~~-----~~~~~l~-------~~l  240 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN----ASA-----HYLSELP-------QLI  240 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC----CeE-----ecHHHHH-------HHh
Confidence            578999999998 9999999999999996 599999998887777665521    111     1112222       223


Q ss_pred             CCCCEEEEcCCCC
Q 025273           88 GKIDVVVSNAAAN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      ...|++|++.+..
T Consensus       241 ~~aDiVI~aT~a~  253 (414)
T PRK13940        241 KKADIIIAAVNVL  253 (414)
T ss_pred             ccCCEEEECcCCC
Confidence            4689999998864

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.42  E-value=0.0048  Score=54.52  Aligned_cols=39  Identities=28%  Similarity=0.321  Sum_probs=34.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   52 (255)
                      ++.|.||.|.+|.++++.|.+.|+.|++.+|+.+..+..
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            689999999999999999999999999999987654443

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=97.41  E-value=0.0023  Score=54.06  Aligned_cols=103  Identities=23%  Similarity=0.334  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .+.++||.|+++++|.++++.+.+.|++|+.++++.+..+.+.+.+   +.. .  ..|..+.+..+.+ .+...  +.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~v-~~~~~--~~~  215 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-A--AINYKTPDLAEAL-KEAAP--DGI  215 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-e--EEecCChhHHHHH-HHhcc--CCc
Confidence            4789999999999999999999999999999988876655443322   211 1  1122332222222 22211  469


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |+++++.|..                           .++..++.++++|+++.+++..
T Consensus       216 d~vi~~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  247 (329)
T cd05288         216 DVYFDNVGGE---------------------------ILDAALTLLNKGGRIALCGAIS  247 (329)
T ss_pred             eEEEEcchHH---------------------------HHHHHHHhcCCCceEEEEeecc
Confidence            9999887621                           2233455667788999887654

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.40  E-value=0.0019  Score=54.98  Aligned_cols=81  Identities=19%  Similarity=0.330  Sum_probs=55.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCc---------------------hhHHHHHHHHHhc--CCeEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ---------------------KNVDEAVVKLKAR--GIEVI   64 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~---------------------~~~~~~~~~~~~~--~~~~~   64 (255)
                      .|+.++|+|.|+ ||+|..+++.|++.|. ++.++|++.                     .+.+.+++.+.+.  ..++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            477889999998 8999999999999998 699999863                     2333344445433  23556


Q ss_pred             EEEecCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           65 GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        65 ~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      .+..|++ .+.+.++++       ..|++|.+..
T Consensus       100 ~~~~~~~-~~~~~~~~~-------~~DlVid~~D  125 (339)
T PRK07688        100 AIVQDVT-AEELEELVT-------GVDLIIDATD  125 (339)
T ss_pred             EEeccCC-HHHHHHHHc-------CCCEEEEcCC
Confidence            6666665 344444433       6788887744

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.38  E-value=0.0041  Score=52.34  Aligned_cols=112  Identities=14%  Similarity=0.134  Sum_probs=69.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++|.|.|+ |++|++++..|+..|  .+|++++++.+.++....++...    +...... .  .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence            46889996 899999999999999  47999999998888777766443    1122211 1  12211           


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      +...|++|+++|....    ...+.   .+.+..|..=...+.+.+.++ .+.+.++++|-
T Consensus        66 l~~aDIVIitag~~~~----~g~~R---~dll~~N~~i~~~~~~~i~~~-~~~~~vivvsN  118 (306)
T cd05291          66 CKDADIVVITAGAPQK----PGETR---LDLLEKNAKIMKSIVPKIKAS-GFDGIFLVASN  118 (306)
T ss_pred             hCCCCEEEEccCCCCC----CCCCH---HHHHHHHHHHHHHHHHHHHHh-CCCeEEEEecC
Confidence            2378999999997532    12232   233445554444444443332 24567777774

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.36  E-value=0.0024  Score=50.35  Aligned_cols=82  Identities=20%  Similarity=0.321  Sum_probs=55.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCc-------------------hhHHHHHHHHHhcCC--eEEE
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ-------------------KNVDEAVVKLKARGI--EVIG   65 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~--~~~~   65 (255)
                      ..|++++|+|.| .||+|.++++.|++.|. +++++|.+.                   .+.+.+++.+.+..+  ++..
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            347889999998 67999999999999997 599999872                   344445555555433  4444


Q ss_pred             EEecCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           66 VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        66 ~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      +..++. .+.+.+++       ...|++|.+..
T Consensus        96 ~~~~i~-~~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356        96 LKERVT-AENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             ehhcCC-HHHHHHHH-------hCCCEEEECCC
Confidence            444443 33333333       36899988754

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.36  E-value=0.002  Score=54.36  Aligned_cols=101  Identities=15%  Similarity=0.238  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +|.++||+||+|++|..+++.....|++|+.++++.++.+.+++ +   +.+..   .|-.+++ ..+.+.+..  -+.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~---Ga~~v---i~~~~~~-~~~~v~~~~--~~gv  212 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L---GFDAV---FNYKTVS-LEEALKEAA--PDGI  212 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCEE---EeCCCcc-HHHHHHHHC--CCCc
Confidence            57899999999999999998888899999999988766554432 2   33222   2333222 222222221  1368


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      |+++.+.|. .                          ..+..++.++.+|+++.++..
T Consensus       213 d~vld~~g~-~--------------------------~~~~~~~~l~~~G~iv~~g~~  243 (329)
T cd08294         213 DCYFDNVGG-E--------------------------FSSTVLSHMNDFGRVAVCGSI  243 (329)
T ss_pred             EEEEECCCH-H--------------------------HHHHHHHhhccCCEEEEEcch
Confidence            999988773 1                          112334556778899988754

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.35  E-value=0.0012  Score=58.30  Aligned_cols=79  Identities=24%  Similarity=0.314  Sum_probs=55.0

Q ss_pred             ccCCCCEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCC
Q 025273            8 KRFQGKVAIVTAS----------------TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS   71 (255)
Q Consensus         8 ~~l~~k~vlItGa----------------~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~   71 (255)
                      .+|+||+||||+|                ||-.|+++|+.+..+|++|+++.-...-         ..+..+.++  ++.
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~---------~~p~~v~~i--~V~  320 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL---------ADPQGVKVI--HVE  320 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC---------CCCCCceEE--Eec
Confidence            3589999999998                4678999999999999999998643210         012233333  343


Q ss_pred             CHHHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 025273           72 NGQQRKNLINQTIEKFGKIDVVVSNAAANP  101 (255)
Q Consensus        72 ~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      ..   +++.+.+.+.++ .|++|++|++.+
T Consensus       321 ta---~eM~~av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        321 SA---RQMLAAVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             CH---HHHHHHHHhhCC-CCEEEEeccccc
Confidence            44   444455545454 799999999865

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=97.34  E-value=0.0024  Score=54.36  Aligned_cols=102  Identities=15%  Similarity=0.149  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ..|.++||+|+ |++|..+++.+...|++ |+++++++++.+.+ +++   +...   ..|..+.+ .+++.+ +.. ..
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~~---~i~~~~~~-~~~~~~-~~~-~~  230 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GADF---VINSGQDD-VQEIRE-LTS-GA  230 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCE---EEcCCcch-HHHHHH-HhC-CC
Confidence            34889999986 89999999999999999 99999887765543 333   3222   22443333 332221 111 12


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      .+|+++.+.|...                          ..+..++.++.+|+++.++..
T Consensus       231 ~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  264 (339)
T cd08239         231 GADVAIECSGNTA--------------------------ARRLALEAVRPWGRLVLVGEG  264 (339)
T ss_pred             CCCEEEECCCCHH--------------------------HHHHHHHHhhcCCEEEEEcCC
Confidence            6999999887411                          112234566778999988753

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK04148 hypothetical protein; Provisional

Probab=97.31  E-value=0.0033  Score=45.77  Aligned_cols=79  Identities=18%  Similarity=0.225  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-----------------H
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-----------------G   73 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-----------------~   73 (255)
                      +++++++.|.+  .|.++++.|++.|+.|+++|.++...+..++.      .+.++..|+.+                 +
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~~~~y~~a~liysirpp   87 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPNLEIYKNAKLIYSIRPP   87 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCCHHHHhcCCEEEEeCCC
Confidence            56789999988  78889999999999999999998876654332      34567778866                 3


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           74 QQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        74 ~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      .++...+-++.++. +.|.+|---+
T Consensus        88 ~el~~~~~~la~~~-~~~~~i~~l~  111 (134)
T PRK04148         88 RDLQPFILELAKKI-NVPLIIKPLS  111 (134)
T ss_pred             HHHHHHHHHHHHHc-CCCEEEEcCC
Confidence            34555555555544 4666664433

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.31  E-value=0.0025  Score=52.74  Aligned_cols=102  Identities=19%  Similarity=0.191  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCC-CHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS-NGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~   89 (255)
                      .|+++-|+|+.| +|.--++.-.+.|++|+++++...+-+...+.+   ++..++   |.+ +++.++++.+       .
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GAd~fv---~~~~d~d~~~~~~~-------~  246 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GADVFV---DSTEDPDIMKAIMK-------T  246 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc---CcceeE---EecCCHHHHHHHHH-------h
Confidence            589999999988 998777777777999999999976555554443   566665   666 5666665554       2


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      .|.++|++--.. ..                       -+..++.+++.+|++|+++-...
T Consensus       247 ~dg~~~~v~~~a-~~-----------------------~~~~~~~~lk~~Gt~V~vg~p~~  283 (360)
T KOG0023|consen  247 TDGGIDTVSNLA-EH-----------------------ALEPLLGLLKVNGTLVLVGLPEK  283 (360)
T ss_pred             hcCcceeeeecc-cc-----------------------chHHHHHHhhcCCEEEEEeCcCC
Confidence            344444433211 11                       12234567888999999987654

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.28  E-value=0.0019  Score=53.76  Aligned_cols=82  Identities=13%  Similarity=0.229  Sum_probs=52.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCch---hHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQK---NVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      ++++|+++|.|+ ||-+++++..|+..|. +|+++.|+.+   +++.+.+.+..... .+.+  .++.+.+.+.      
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~------  191 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFA------  191 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhh------
Confidence            467899999997 5559999999999997 5999999953   66666665543211 1221  1111111111      


Q ss_pred             HHHhCCCCEEEEcCCCC
Q 025273           84 IEKFGKIDVVVSNAAAN  100 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~  100 (255)
                       +...+.|++||+.-..
T Consensus       192 -~~~~~aDivINaTp~G  207 (288)
T PRK12749        192 -EALASADILTNGTKVG  207 (288)
T ss_pred             -hhcccCCEEEECCCCC
Confidence             1223689999987543

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.28  E-value=0.0078  Score=50.80  Aligned_cols=114  Identities=14%  Similarity=0.100  Sum_probs=71.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ++++|.|+|+ |.+|.+++..|+..|.  .++++|++.+.++....++....   .+... ..  .+.+           
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~~-----------   69 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDYS-----------   69 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCHH-----------
Confidence            5789999998 9999999999999986  69999999888777766665431   12221 11  1111           


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .+..-|++|..||....    ...+..   ..++.|..-...+...+..+- ..+.++++|-
T Consensus        70 ~~~~adivIitag~~~k----~g~~R~---dll~~N~~i~~~i~~~i~~~~-~~~~vivvsN  123 (315)
T PRK00066         70 DCKDADLVVITAGAPQK----PGETRL---DLVEKNLKIFKSIVGEVMASG-FDGIFLVASN  123 (315)
T ss_pred             HhCCCCEEEEecCCCCC----CCCCHH---HHHHHHHHHHHHHHHHHHHhC-CCeEEEEccC
Confidence            12378999999997532    123332   334555543333333333222 3567777764

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.28  E-value=0.0041  Score=50.53  Aligned_cols=81  Identities=16%  Similarity=0.267  Sum_probs=54.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCch-------------------hHHHHHHHHHhcC--CeEEEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQK-------------------NVDEAVVKLKARG--IEVIGV   66 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~-------------------~~~~~~~~~~~~~--~~~~~~   66 (255)
                      .|++++|+|.|+ ||+|..+++.|++.|.. ++++|.+.-                   +.+.+++.+.+..  .++..+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            478899999998 99999999999999974 888876532                   3333444454443  355555


Q ss_pred             EecCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      ...++ ++.+.+++       ...|++|.+..
T Consensus       108 ~~~i~-~~~~~~~~-------~~~DiVi~~~D  131 (245)
T PRK05690        108 NARLD-DDELAALI-------AGHDLVLDCTD  131 (245)
T ss_pred             eccCC-HHHHHHHH-------hcCCEEEecCC
Confidence            55554 33333333       36888887754

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.25  E-value=0.0028  Score=54.87  Aligned_cols=81  Identities=26%  Similarity=0.337  Sum_probs=56.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCC-------------------chhHHHHHHHHHhcCC--eEEEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRK-------------------QKNVDEAVVKLKARGI--EVIGV   66 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~-------------------~~~~~~~~~~~~~~~~--~~~~~   66 (255)
                      .+++++|+|.|+ ||+|.++++.|++.|.. ++++|++                   ..+.+.+++.+.+..+  ++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            477889999965 79999999999999985 9999987                   3455666666655433  44444


Q ss_pred             EecCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      ...+. .+.+.++++       ..|++|++..
T Consensus       211 ~~~~~-~~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVT-SDNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             eccCC-hHHHHHHHh-------CCCEEEECCC
Confidence            44443 234443333       6899998865

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=97.25  E-value=0.0055  Score=52.43  Aligned_cols=41  Identities=22%  Similarity=0.335  Sum_probs=36.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   52 (255)
                      .|.+|+|.|+ |++|..+++.+...|++|+++++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4889999999 9999999999999999999999988776544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.23  E-value=0.0018  Score=54.03  Aligned_cols=81  Identities=15%  Similarity=0.273  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .++++++|+|+++++|..+++.+...|++|++++++.+..+.+ +++   +..   ...|..+.+..+.+.+.. . .+.
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~-~-~~~  208 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD---VAINYRTEDFAEEVKEAT-G-GRG  208 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC---EEEeCCchhHHHHHHHHh-C-CCC
Confidence            3578999999999999999999999999999999987655443 222   222   123444333333322211 1 136


Q ss_pred             CCEEEEcCCC
Q 025273           90 IDVVVSNAAA   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|.+++++|.
T Consensus       209 ~d~vi~~~g~  218 (323)
T cd05276         209 VDVILDMVGG  218 (323)
T ss_pred             eEEEEECCch
Confidence            9999999883

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.22  E-value=0.0023  Score=54.63  Aligned_cols=80  Identities=24%  Similarity=0.336  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +|+.+||.||+||+|.+.++.....|+..+++.++.+..+ +.+++   +..   ...|-.+++- .+.+++..  .+++
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l---GAd---~vvdy~~~~~-~e~~kk~~--~~~~  226 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL---GAD---EVVDYKDENV-VELIKKYT--GKGV  226 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc---CCc---EeecCCCHHH-HHHHHhhc--CCCc
Confidence            5789999999999999999988888955555555554433 33333   222   2246666333 33332221  4589


Q ss_pred             CEEEEcCCCC
Q 025273           91 DVVVSNAAAN  100 (255)
Q Consensus        91 d~lv~~ag~~  100 (255)
                      |+++.+.|..
T Consensus       227 DvVlD~vg~~  236 (347)
T KOG1198|consen  227 DVVLDCVGGS  236 (347)
T ss_pred             cEEEECCCCC
Confidence            9999999863

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=97.19  E-value=0.0075  Score=47.90  Aligned_cols=106  Identities=16%  Similarity=0.114  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-------------cCCeEEEEEecCCCHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-------------RGIEVIGVVCHVSNGQQRK   77 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~Dv~~~~~v~   77 (255)
                      .+.+||+.|++.|   .=+..|+++|++|+.++.++..++.+.++-..             .+.++.++++|+.+.+.  
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            5679999999877   45778899999999999999988865432211             13468888999987542  


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           78 NLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                             +..+..|.++-.+....       .+++...+           ..+.+..+++++|.+++++
T Consensus       109 -------~~~~~fD~i~D~~~~~~-------l~~~~R~~-----------~~~~l~~lLkpgG~~ll~~  152 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAALIA-------LPEEMRQR-----------YAAHLLALLPPGARQLLIT  152 (213)
T ss_pred             -------ccCCCcCEEEechhhcc-------CCHHHHHH-----------HHHHHHHHcCCCCeEEEEE
Confidence                   01235788776654322       23333222           4555667788888766664

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.16  E-value=0.013  Score=47.18  Aligned_cols=141  Identities=18%  Similarity=0.237  Sum_probs=88.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      .|.+|||--|.||+|..+++.+...|+.++.+..+.++.+..++    ++.+   +..|-+.++=+    +++.+--  .
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake----nG~~---h~I~y~~eD~v----~~V~kiTngK  214 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE----NGAE---HPIDYSTEDYV----DEVKKITNGK  214 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh----cCCc---ceeeccchhHH----HHHHhccCCC
Confidence            47899999999999999999999999999998888766554332    2322   22355544433    3443322  3


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC---------------
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP---------------  153 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~---------------  153 (255)
                      .+|+++-..|...            +..               -+..+++.|.+|..+-..+..+               
T Consensus       215 GVd~vyDsvG~dt------------~~~---------------sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lv  267 (336)
T KOG1197|consen  215 GVDAVYDSVGKDT------------FAK---------------SLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLV  267 (336)
T ss_pred             Cceeeeccccchh------------hHH---------------HHHHhccCceEEEeccccCCCCCeehhhcChhhhhhc
Confidence            6899888777421            111               1345677788888776555432               


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCC---CeeEEEEeC
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAP---DTRVNCVAP  189 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~---~v~v~~v~p  189 (255)
                      .+....|-....-+..++..+......   +++|+++.|
T Consensus       268 rpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~yp  306 (336)
T KOG1197|consen  268 RPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYP  306 (336)
T ss_pred             cHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecc
Confidence            223445666666555555555555432   567777766

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=97.16  E-value=0.0036  Score=54.68  Aligned_cols=96  Identities=21%  Similarity=0.270  Sum_probs=64.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+.|++|+|.|. |.||+.+++.|...|++|+++++++.+.....    ..+.+       +.+   +++++       .
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~----~~G~~-------v~~---l~eal-------~  266 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA----MDGFR-------VMT---MEEAA-------E  266 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH----hcCCE-------ecC---HHHHH-------h
Confidence            368999999997 68999999999999999999999876533221    11212       111   12222       2


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY  151 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~  151 (255)
                      ..|++|.+.|...                         .+....+..|++++.+++++.....
T Consensus       267 ~aDVVI~aTG~~~-------------------------vI~~~~~~~mK~GailiNvG~~d~E  304 (425)
T PRK05476        267 LGDIFVTATGNKD-------------------------VITAEHMEAMKDGAILANIGHFDNE  304 (425)
T ss_pred             CCCEEEECCCCHH-------------------------HHHHHHHhcCCCCCEEEEcCCCCCc
Confidence            6899998765311                         0223456678888889998876543

>cd08230 glucose_DH Glucose dehydrogenase

Probab=97.15  E-value=0.0081  Score=51.51  Aligned_cols=99  Identities=25%  Similarity=0.359  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC---chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK---QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .|++|+|+|+ |++|...++.+...|++|++++|+   +++.+ ..+   +.+...    .|..+ +.+.+ .    ...
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~---~~Ga~~----v~~~~-~~~~~-~----~~~  236 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVE---ELGATY----VNSSK-TPVAE-V----KLV  236 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHH---HcCCEE----ecCCc-cchhh-h----hhc
Confidence            5889999986 999999998888889999999984   33333 222   234432    23332 22222 1    122


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      +.+|++|.+.|...                          .+...+..++++|+++.++...+
T Consensus       237 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~  273 (355)
T cd08230         237 GEFDLIIEATGVPP--------------------------LAFEALPALAPNGVVILFGVPGG  273 (355)
T ss_pred             CCCCEEEECcCCHH--------------------------HHHHHHHHccCCcEEEEEecCCC
Confidence            47999999987310                          13334566788899998876543

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=97.15  E-value=0.0034  Score=49.55  Aligned_cols=197  Identities=15%  Similarity=0.007  Sum_probs=119.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +.+-.+.++.|+.+..|.++.+.-...|..|.++.|+..+  ++.+   .-...+.+++.|.....-.+...       .
T Consensus        49 dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~l~---sw~~~vswh~gnsfssn~~k~~l-------~  116 (283)
T KOG4288|consen   49 DVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QTLS---SWPTYVSWHRGNSFSSNPNKLKL-------S  116 (283)
T ss_pred             hhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--chhh---CCCcccchhhccccccCcchhhh-------c
Confidence            3444678999999999999999999999999999999652  3322   22456666777765443222221       2


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      .+..++-++|....           ...+..+|=...++..+++.+.-.  .++|+||....-.+......|=-+|.+.|
T Consensus       117 g~t~v~e~~ggfgn-----------~~~m~~ing~ani~a~kaa~~~gv--~~fvyISa~d~~~~~~i~rGY~~gKR~AE  183 (283)
T KOG4288|consen  117 GPTFVYEMMGGFGN-----------IILMDRINGTANINAVKAAAKAGV--PRFVYISAHDFGLPPLIPRGYIEGKREAE  183 (283)
T ss_pred             CCcccHHHhcCccc-----------hHHHHHhccHhhHHHHHHHHHcCC--ceEEEEEhhhcCCCCccchhhhccchHHH
Confidence            56666666665431           234456676677777777765433  48999997654222222336888898776


Q ss_pred             HHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC--------hhHHHHHHhh-----------cccCCCCCHHHHHHHH
Q 025273          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN--------DGVRQTIEQN-----------TLLNRLGTTRDMAAAA  229 (255)
Q Consensus       169 ~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~--------~~~~~~~~~~-----------~~~~~~~~~~d~a~~~  229 (255)
                      .=.-   ..+  +.|-.-+.||++...  +...+.        +.+.......           ......+..+++|.++
T Consensus       184 ~Ell---~~~--~~rgiilRPGFiyg~--R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aa  256 (283)
T KOG4288|consen  184 AELL---KKF--RFRGIILRPGFIYGT--RNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAA  256 (283)
T ss_pred             HHHH---Hhc--CCCceeeccceeecc--cccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHH
Confidence            4221   112  456677899999764  222111        1111111111           1122244679999998


Q ss_pred             HHhcCCCC
Q 025273          230 AFLASDDA  237 (255)
Q Consensus       230 ~~l~s~~~  237 (255)
                      +..++++.
T Consensus       257 l~ai~dp~  264 (283)
T KOG4288|consen  257 LKAIEDPD  264 (283)
T ss_pred             HHhccCCC
Confidence            88886654

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=97.15  E-value=0.0034  Score=54.23  Aligned_cols=100  Identities=21%  Similarity=0.257  Sum_probs=63.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      .|.+|||.|+ |++|..+++.+...|+ +|+++++++++++.+ +++   +....   .|..+++    +.+++.+.. +
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~~~---i~~~~~~----~~~~i~~~~~~  258 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL---GATAT---VNAGDPN----AVEQVRELTGG  258 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc---CCceE---eCCCchh----HHHHHHHHhCC
Confidence            4789999985 8999999988888899 599999887765543 222   32221   2333322    222333222 3


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      .+|++|.+.|...                          ..+..+..++++|+++.++..
T Consensus       259 g~d~vid~~G~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  292 (371)
T cd08281         259 GVDYAFEMAGSVP--------------------------ALETAYEITRRGGTTVTAGLP  292 (371)
T ss_pred             CCCEEEECCCChH--------------------------HHHHHHHHHhcCCEEEEEccC
Confidence            6999999987411                          122234556788999988754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.14  E-value=0.0026  Score=52.51  Aligned_cols=79  Identities=16%  Similarity=0.252  Sum_probs=57.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +.++++++|.|| ||-+++++..|++.|+ +|+++.|+.++++++++.+.+.+..+.  ..+..+.+..+          
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~--~~~~~~~~~~~----------  189 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVE--AAALADLEGLE----------  189 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccc--ccccccccccc----------
Confidence            456899999985 6789999999999996 599999999999999888876543211  12222222211          


Q ss_pred             CCCCEEEEcCCCCC
Q 025273           88 GKIDVVVSNAAANP  101 (255)
Q Consensus        88 g~~d~lv~~ag~~~  101 (255)
                       ..|++||+.....
T Consensus       190 -~~dliINaTp~Gm  202 (283)
T COG0169         190 -EADLLINATPVGM  202 (283)
T ss_pred             -ccCEEEECCCCCC
Confidence             3799999987654

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=97.14  E-value=0.005  Score=53.02  Aligned_cols=98  Identities=20%  Similarity=0.233  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||.|+ |++|..+++.+...|++|++++.+.++.....+++   +....   .|..+.+.+.       +..+.+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~~v---i~~~~~~~~~-------~~~~~~  248 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GADSF---LVSTDPEKMK-------AAIGTM  248 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCcEE---EcCCCHHHHH-------hhcCCC
Confidence            5889999775 89999999988889999888887765543333332   33222   1333332222       222468


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      |++|.+.|...                          ..+..++.++++|+++.++..
T Consensus       249 D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~vG~~  280 (360)
T PLN02586        249 DYIIDTVSAVH--------------------------ALGPLLGLLKVNGKLITLGLP  280 (360)
T ss_pred             CEEEECCCCHH--------------------------HHHHHHHHhcCCcEEEEeCCC
Confidence            99999887310                          112234566788999988743

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=97.14  E-value=0.0045  Score=53.18  Aligned_cols=100  Identities=18%  Similarity=0.191  Sum_probs=63.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (255)
                      .|.+|||.|+ |++|..+++.+...|++ |+.++++.++.+.+. ++   +...   ..|..+.+..+    .+.+..  
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~---Ga~~---~i~~~~~~~~~----~i~~~~~~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EF---GATH---TVNSSGTDPVE----AIRALTGG  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCce---EEcCCCcCHHH----HHHHHhCC
Confidence            4789999985 99999999988889986 888988877655442 22   3221   12333322222    222222  


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      ..+|+++.+.|...                          ..+..+..++++|+++.++..
T Consensus       244 ~g~d~vid~~g~~~--------------------------~~~~~~~~~~~~G~iv~~G~~  278 (358)
T TIGR03451       244 FGADVVIDAVGRPE--------------------------TYKQAFYARDLAGTVVLVGVP  278 (358)
T ss_pred             CCCCEEEECCCCHH--------------------------HHHHHHHHhccCCEEEEECCC
Confidence            25899999887311                          111223456788999998864

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=97.13  E-value=0.0074  Score=52.08  Aligned_cols=79  Identities=16%  Similarity=0.276  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   88 (255)
                      .|.+|||+|+ |++|...++.+...|+ +|++++++.++++.+ +++   +...   ..|..+ .+.+.+.+.++..  +
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~~---~i~~~~~~~~~~~~v~~~~~--~  254 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GATD---CVNPNDYDKPIQEVIVEITD--G  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCe---EEcccccchhHHHHHHHHhC--C
Confidence            4789999985 8999999998888898 699999988766544 222   3222   123332 2223332332221  3


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|+++.++|.
T Consensus       255 g~d~vid~~G~  265 (368)
T TIGR02818       255 GVDYSFECIGN  265 (368)
T ss_pred             CCCEEEECCCC
Confidence            69999999884

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.12  E-value=0.0024  Score=56.69  Aligned_cols=60  Identities=20%  Similarity=0.269  Sum_probs=44.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKN   78 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   78 (255)
                      ++++|.|+ |.+|+++++.|.++|+.|++++++.+..+.+.+.     ..+.++..|.++.+.+++
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-----~~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-----LDVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----cCEEEEEeCCCCHHHHHH
Confidence            36889987 9999999999999999999999998776654431     134555666666554443

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.11  E-value=0.0065  Score=52.17  Aligned_cols=37  Identities=14%  Similarity=0.157  Sum_probs=32.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ   46 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~   46 (255)
                      .|++.+|+|.|+ ||+|..+++.|++.|.. ++++|.+.
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            478899999988 89999999999999975 88888763

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.11  E-value=0.0059  Score=48.44  Aligned_cols=80  Identities=16%  Similarity=0.194  Sum_probs=53.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc------------------hhHHHHHHHHHhc--CCeEEEEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ------------------KNVDEAVVKLKAR--GIEVIGVV   67 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~------------------~~~~~~~~~~~~~--~~~~~~~~   67 (255)
                      .|+.++|+|.|+ ||+|..+++.|++.|.. ++++|.+.                  .+.+.+++.+...  ..++..+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            477889999985 89999999999999986 99998872                  2333444444433  23555555


Q ss_pred             ecCCCHHHHHHHHHHHHHHhCCCCEEEEcC
Q 025273           68 CHVSNGQQRKNLINQTIEKFGKIDVVVSNA   97 (255)
Q Consensus        68 ~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~a   97 (255)
                      ..+++ +.+.+++       ...|++|.+.
T Consensus       104 ~~i~~-~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644        104 EKIDE-DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             eecCH-HHHHHHH-------cCCCEEEECC
Confidence            55543 3333333       3678888773

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.09  E-value=0.0017  Score=49.54  Aligned_cols=39  Identities=26%  Similarity=0.266  Sum_probs=35.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      .+++||+++|.|++.-+|..+++.|.++|++|+++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            468999999999977789999999999999999999874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=97.08  E-value=0.022  Score=45.48  Aligned_cols=124  Identities=17%  Similarity=0.219  Sum_probs=79.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +.|++||=.|++||   .+++-+++.|++|+.+|-+++..+..+.+..+.+..+.+.          ...++++.+..++
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~----------~~~~edl~~~~~~  124 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYR----------QATVEDLASAGGQ  124 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccch----------hhhHHHHHhcCCC
Confidence            68999999999999   7999999999999999999999888777766555443331          1223333333468


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      .|++++.-=...-      .+++.              +++.+...++++ -++++|.+.     ....+|..+--+.+.
T Consensus       125 FDvV~cmEVlEHv------~dp~~--------------~~~~c~~lvkP~-G~lf~STin-----rt~ka~~~~i~~ae~  178 (243)
T COG2227         125 FDVVTCMEVLEHV------PDPES--------------FLRACAKLVKPG-GILFLSTIN-----RTLKAYLLAIIGAEY  178 (243)
T ss_pred             ccEEEEhhHHHcc------CCHHH--------------HHHHHHHHcCCC-cEEEEeccc-----cCHHHHHHHHHHHHH
Confidence            9999987433221      12222              445555555554 667777654     334455555544444


Q ss_pred             HHH
Q 025273          170 LTK  172 (255)
Q Consensus       170 l~~  172 (255)
                      +.+
T Consensus       179 vl~  181 (243)
T COG2227         179 VLR  181 (243)
T ss_pred             HHH
Confidence            443

>PLN02928 oxidoreductase family protein

Probab=97.07  E-value=0.0027  Score=54.31  Aligned_cols=109  Identities=18%  Similarity=0.212  Sum_probs=65.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+.||++.|.|- |.||+++++.|...|++|+..+|+......  ..+.-....+..+........++++++.      
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~ell~------  225 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPE--DGLLIPNGDVDDLVDEKGGHEDIYEFAG------  225 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhh--hhhccccccccccccccCcccCHHHHHh------
Confidence            3588999999986 899999999999999999999987432111  0000000000000000112334555554      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       .-|+++.+........                     -.+....+..|+++..+||++-
T Consensus       226 -~aDiVvl~lPlt~~T~---------------------~li~~~~l~~Mk~ga~lINvaR  263 (347)
T PLN02928        226 -EADIVVLCCTLTKETA---------------------GIVNDEFLSSMKKGALLVNIAR  263 (347)
T ss_pred             -hCCEEEECCCCChHhh---------------------cccCHHHHhcCCCCeEEEECCC
Confidence             5799998876533110                     1123456778888888998873

>PLN02740 Alcohol dehydrogenase-like

Probab=97.06  E-value=0.0072  Score=52.43  Aligned_cols=79  Identities=15%  Similarity=0.271  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   88 (255)
                      .|.+|||.|+ |++|..+++.+...|+ +|++++++.++++.++ ++   +....   .|..+. +...+.+.++..  +
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~---Ga~~~---i~~~~~~~~~~~~v~~~~~--~  267 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM---GITDF---INPKDSDKPVHERIREMTG--G  267 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc---CCcEE---EecccccchHHHHHHHHhC--C
Confidence            4789999986 9999999999888999 5999999887766542 22   33222   233332 123333333221  2


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|+++.+.|.
T Consensus       268 g~dvvid~~G~  278 (381)
T PLN02740        268 GVDYSFECAGN  278 (381)
T ss_pred             CCCEEEECCCC
Confidence            69999999884

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=97.06  E-value=0.0092  Score=51.70  Aligned_cols=98  Identities=21%  Similarity=0.228  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|.+++|.|+ |++|..+++.....|++|++++++.++.....++   .+....   .|..+.+.+       .+..+.+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~---lGa~~~---i~~~~~~~v-------~~~~~~~  243 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR---LGADSF---LVTTDSQKM-------KEAVGTM  243 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHh---CCCcEE---EcCcCHHHH-------HHhhCCC
Confidence            5789999986 8999999998888999999888875542222222   233222   233332222       2222468


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      |+++.+.|...                          ..+..++.++++|+++.++..
T Consensus       244 D~vid~~G~~~--------------------------~~~~~~~~l~~~G~iv~vG~~  275 (375)
T PLN02178        244 DFIIDTVSAEH--------------------------ALLPLFSLLKVSGKLVALGLP  275 (375)
T ss_pred             cEEEECCCcHH--------------------------HHHHHHHhhcCCCEEEEEccC
Confidence            99999887311                          112234556778899988753

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.06  E-value=0.0076  Score=48.42  Aligned_cols=81  Identities=19%  Similarity=0.302  Sum_probs=55.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc-------------------hhHHHHHHHHHhcC--CeEEEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ-------------------KNVDEAVVKLKARG--IEVIGV   66 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~   66 (255)
                      .|++++|+|.| .||+|.++++.|++.|.. ++++|.+.                   .+.+.+++.+.+..  .++..+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            47788999998 679999999999999975 88886542                   23445555555543  356666


Q ss_pred             EecCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      ..+++ .+.+.++++       ..|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          97 NERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             cceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            65663 344444433       6899998865

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.05  E-value=0.0058  Score=44.14  Aligned_cols=76  Identities=17%  Similarity=0.243  Sum_probs=55.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHH-cCCe-EEEEeCCc----------------------hhHHHHHHHHHhcCCeEEEEEec
Q 025273           14 VAIVTASTQGIGFGIAERLGL-EGAS-VVVSSRKQ----------------------KNVDEAVVKLKARGIEVIGVVCH   69 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~-~G~~-V~~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~D   69 (255)
                      +|.|.|++|-+|+.+++.+.+ .+.+ +..++|+.                      +.++.+.++.     .   +..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~-----D---VvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEA-----D---VVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccC-----C---EEEE
Confidence            689999999999999999999 6888 55567776                      2333333331     1   5679


Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEEcCCC
Q 025273           70 VSNGQQRKNLINQTIEKFGKIDVVVSNAAA   99 (255)
Q Consensus        70 v~~~~~v~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      .|.++.+.+.++.+.+.  ++.+++-..|+
T Consensus        74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             cCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999999999888776  78888888885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=97.05  E-value=0.0088  Score=51.59  Aligned_cols=79  Identities=13%  Similarity=0.218  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   88 (255)
                      .|.+|||.|+ |++|..+++.+...|+ +|++++++.++.+.+ +++   +....   .|..+. +++.+.+.++..  +
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~~~~~~~~~v~~~~~--~  255 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GATDC---VNPKDHDKPIQQVLVEMTD--G  255 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCEE---EcccccchHHHHHHHHHhC--C
Confidence            4889999975 8999999999999999 699999998776644 222   33222   233332 233333333322  3


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|+++.+.|.
T Consensus       256 g~d~vid~~g~  266 (368)
T cd08300         256 GVDYTFECIGN  266 (368)
T ss_pred             CCcEEEECCCC
Confidence            69999998873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.04  E-value=0.0075  Score=47.41  Aligned_cols=37  Identities=14%  Similarity=0.310  Sum_probs=32.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCC
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK   45 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~   45 (255)
                      ..|+.++|+|.|+ ||+|..+++.|++.|. +++++|++
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3477899999998 7899999999999998 59999988

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.03  E-value=0.0076  Score=53.17  Aligned_cols=40  Identities=30%  Similarity=0.299  Sum_probs=35.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~   48 (255)
                      ..+.||+++|.|.+ .||+.+++.|...|++|+++++++..
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~  289 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPIC  289 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            35889999999976 59999999999999999999888654

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=97.03  E-value=0.012  Score=51.29  Aligned_cols=91  Identities=24%  Similarity=0.365  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +.|++|+|.|++ .||+.+++.+...|++|+++++++.+++....    .+....       +.   ++.+       ..
T Consensus       200 l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~----~G~~~~-------~~---~e~v-------~~  257 (413)
T cd00401         200 IAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQAAM----EGYEVM-------TM---EEAV-------KE  257 (413)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHHHHh----cCCEEc-------cH---HHHH-------cC
Confidence            689999999976 79999999999999999999998776544322    232211       11   1122       25


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .|++|.++|...                         .+.+..++.|++++.+++++.
T Consensus       258 aDVVI~atG~~~-------------------------~i~~~~l~~mk~GgilvnvG~  290 (413)
T cd00401         258 GDIFVTTTGNKD-------------------------IITGEHFEQMKDGAIVCNIGH  290 (413)
T ss_pred             CCEEEECCCCHH-------------------------HHHHHHHhcCCCCcEEEEeCC
Confidence            799998876311                         122334677888899999984

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.03  E-value=0.0037  Score=55.04  Aligned_cols=47  Identities=21%  Similarity=0.378  Sum_probs=40.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKL   56 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~   56 (255)
                      ++.+++++|.|+ |.+|+.+++.|...|+ .|++++|+.+.++.+.+++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            478899999987 9999999999999997 6999999987776665554

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.01  E-value=0.027  Score=46.24  Aligned_cols=139  Identities=13%  Similarity=0.136  Sum_probs=77.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCch-------------------hHHHHHHHHHhcCC--eEEEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQK-------------------NVDEAVVKLKARGI--EVIGV   66 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~-------------------~~~~~~~~~~~~~~--~~~~~   66 (255)
                      .|++.+|+|.|+ ||+|.++++.|++.| -+++++|.+.-                   +.+.+++.+...++  ++..+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            478889999975 699999999999999 45999986622                   12233444443333  33333


Q ss_pred             EecCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      . +..+++.++.++.      .++|++|.+.....                      .-..+.+.+..   .+-.++..+
T Consensus       106 ~-~~i~~e~~~~ll~------~~~D~VIdaiD~~~----------------------~k~~L~~~c~~---~~ip~I~~g  153 (268)
T PRK15116        106 D-DFITPDNVAEYMS------AGFSYVIDAIDSVR----------------------PKAALIAYCRR---NKIPLVTTG  153 (268)
T ss_pred             e-cccChhhHHHHhc------CCCCEEEEcCCCHH----------------------HHHHHHHHHHH---cCCCEEEEC
Confidence            2 2223444444331      25788887765311                      11122222222   222455555


Q ss_pred             ccCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC
Q 025273          147 SIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP  180 (255)
Q Consensus       147 s~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~  180 (255)
                      +.++.....-...-..+|.-...|++.+++++.+
T Consensus       154 Gag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~  187 (268)
T PRK15116        154 GAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKS  187 (268)
T ss_pred             CcccCCCCCeEEEEeeecccCChHHHHHHHHHHH
Confidence            5444433222333445566667788888888754

>PRK13256 thiopurine S-methyltransferase; Reviewed

Probab=97.01  E-value=0.013  Score=46.86  Aligned_cols=142  Identities=11%  Similarity=0.074  Sum_probs=89.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHH-------------hcCCeEEEEEecCCCHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-------------ARGIEVIGVVCHVSNGQQRK   77 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~~~~Dv~~~~~v~   77 (255)
                      ++.+|||-|++.|   .=+..|+++|+.|+.++-++...+...++..             ..+.++.++.+|+.+...-.
T Consensus        43 ~~~rvLvPgCGkg---~D~~~LA~~G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~l~~~~  119 (226)
T PRK13256         43 DSSVCLIPMCGCS---IDMLFFLSKGVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFNLPKIA  119 (226)
T ss_pred             CCCeEEEeCCCCh---HHHHHHHhCCCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcCCCccc
Confidence            4679999999876   3467889999999999999998887755421             11457888999998753211


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCC
Q 025273           78 NLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSM  157 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~  157 (255)
                             +..+++|.++-.+....       .+++...+           ..+.+..+++++++++.++=.  +.+....
T Consensus       120 -------~~~~~fD~VyDra~~~A-------lpp~~R~~-----------Y~~~l~~lL~pgg~llll~~~--~~~~~~G  172 (226)
T PRK13256        120 -------NNLPVFDIWYDRGAYIA-------LPNDLRTN-----------YAKMMLEVCSNNTQILLLVME--HDKKSQT  172 (226)
T ss_pred             -------cccCCcCeeeeehhHhc-------CCHHHHHH-----------HHHHHHHHhCCCcEEEEEEEe--cCCCCCC
Confidence                   11246888877666544       23332222           234455667778887777522  2233466


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeC
Q 025273          158 AMYGVTKTALLGLTKALAAEMAPDTRVNCVAP  189 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~p  189 (255)
                      ++|+.+..-+..+       +++...+..+..
T Consensus       173 PPf~v~~~e~~~l-------f~~~~~i~~l~~  197 (226)
T PRK13256        173 PPYSVTQAELIKN-------FSAKIKFELIDS  197 (226)
T ss_pred             CCCcCCHHHHHHh-------ccCCceEEEeee
Confidence            7788887555432       333445555554

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.00  E-value=0.00085  Score=43.14  Aligned_cols=36  Identities=22%  Similarity=0.296  Sum_probs=23.0

Q ss_pred             CC-CEEEEEcCCCchHHHHHHHHH-HcCCeEEEEeCCc
Q 025273           11 QG-KVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQ   46 (255)
Q Consensus        11 ~~-k~vlItGa~~giG~~~a~~l~-~~G~~V~~~~r~~   46 (255)
                      +| |+|||+|+|+|.|.+-.-.++ ..|+..+.+....
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fEk   74 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFEK   74 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE---
T ss_pred             CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeecc
Confidence            44 899999999999999444444 6678777776543

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.98  E-value=0.0085  Score=49.61  Aligned_cols=101  Identities=18%  Similarity=0.251  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ..+++|||.|+ |++|..+++.+...|++ |+++++++++++.. +++   +....+   |..+   ..+.+.++.. -.
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~~~i---~~~~---~~~~~~~~~~-~~  186 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELA-LSF---GATALA---EPEV---LAERQGGLQN-GR  186 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCcEec---Cchh---hHHHHHHHhC-CC
Confidence            36889999986 89999999988888997 88888776655432 222   322211   2211   1111221111 12


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      .+|+++.+.|...                          ..+.++..++++|+++.++..
T Consensus       187 g~d~vid~~G~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  220 (280)
T TIGR03366       187 GVDVALEFSGATA--------------------------AVRACLESLDVGGTAVLAGSV  220 (280)
T ss_pred             CCCEEEECCCChH--------------------------HHHHHHHHhcCCCEEEEeccC
Confidence            5899999887311                          122335566788999999864

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.97  E-value=0.0047  Score=54.27  Aligned_cols=73  Identities=21%  Similarity=0.345  Sum_probs=52.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+.+++++|.|+ |.+|+.+++.|...| .+|++++|+.+.++.+.+++.   ..  .+.     .+++.+.+.      
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g---~~--~i~-----~~~l~~~l~------  239 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG---GE--AVK-----FEDLEEYLA------  239 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---Ce--Eee-----HHHHHHHHh------
Confidence            478899999997 999999999999999 679999999877665555432   11  111     123333332      


Q ss_pred             CCCCEEEEcCCC
Q 025273           88 GKIDVVVSNAAA   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                       ..|++|.+.+.
T Consensus       240 -~aDvVi~aT~s  250 (417)
T TIGR01035       240 -EADIVISSTGA  250 (417)
T ss_pred             -hCCEEEECCCC
Confidence             57999998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.95  E-value=0.018  Score=46.25  Aligned_cols=148  Identities=16%  Similarity=0.184  Sum_probs=82.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCch-------------------hHHHHHHHHHhcCC--eEEE
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQK-------------------NVDEAVVKLKARGI--EVIG   65 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~--~~~~   65 (255)
                      ..|++.+|+|.|+ ||+|..+++.|++.|. +++++|.+.-                   +.+.+++.+.+..+  ++..
T Consensus         7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~   85 (231)
T cd00755           7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDA   85 (231)
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            3477889999975 6899999999999997 4999886532                   33334444444333  4444


Q ss_pred             EEecCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           66 VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        66 ~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      +...++ ++....++.      ..+|++|.+..-..                      .-..+.+.+...   +-.+|..
T Consensus        86 ~~~~i~-~~~~~~l~~------~~~D~VvdaiD~~~----------------------~k~~L~~~c~~~---~ip~I~s  133 (231)
T cd00755          86 VEEFLT-PDNSEDLLG------GDPDFVVDAIDSIR----------------------AKVALIAYCRKR---KIPVISS  133 (231)
T ss_pred             eeeecC-HhHHHHHhc------CCCCEEEEcCCCHH----------------------HHHHHHHHHHHh---CCCEEEE
Confidence            444444 333333331      25788887744211                      111222333222   2244444


Q ss_pred             cccCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-Cee--EEEEe
Q 025273          146 SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR--VNCVA  188 (255)
Q Consensus       146 ss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~--v~~v~  188 (255)
                      .+.++.........-..+|.-...|++.+++++.+ +++  +-+|.
T Consensus       134 ~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~  179 (231)
T cd00755         134 MGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY  179 (231)
T ss_pred             eCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence            44443322222233345556667788888899866 664  44443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=96.94  E-value=0.041  Score=42.30  Aligned_cols=121  Identities=23%  Similarity=0.255  Sum_probs=75.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .+++++|=.|++.|.   ++..+++.|.+|+.++.+++..+...+.+...+.++.++.+|+.+..            .+.
T Consensus        18 ~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------------~~~   82 (179)
T TIGR00537        18 LKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKGV------------RGK   82 (179)
T ss_pred             cCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccccc------------CCc
Confidence            456789988887763   45566677778999999999888877777666667888888875421            136


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHH---HHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWD---INVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~---~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .|.++.|.-+........  ..+.....+.   .+..-...+++.+.+.|+++|+++++-+
T Consensus        83 fD~Vi~n~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~~  141 (179)
T TIGR00537        83 FDVILFNPPYLPLEDDLR--RGDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQS  141 (179)
T ss_pred             ccEEEECCCCCCCcchhc--ccchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEEe
Confidence            899998876543211111  0110110000   0111123456666677888898887653

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.93  E-value=0.0038  Score=51.70  Aligned_cols=38  Identities=24%  Similarity=0.260  Sum_probs=34.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK   45 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~   45 (255)
                      .+++||+|+|.|+++-.|+.++..|+++|++|.++.|.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            35889999999999999999999999999999988774

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.93  E-value=0.011  Score=45.43  Aligned_cols=32  Identities=19%  Similarity=0.220  Sum_probs=28.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ   46 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~   46 (255)
                      +|+|.|+ ||+|..+++.|++.|.. ++++|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3788885 89999999999999986 99999875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.92  E-value=0.016  Score=42.39  Aligned_cols=78  Identities=17%  Similarity=0.368  Sum_probs=56.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCC-------------------chhHHHHHHHHHhc--CCeEEEEEec
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRK-------------------QKNVDEAVVKLKAR--GIEVIGVVCH   69 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~-------------------~~~~~~~~~~~~~~--~~~~~~~~~D   69 (255)
                      +++|+|.|+ |++|..+++.|++.|.. +.++|.+                   ..+.+.+++.+.+.  ..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            567888875 78999999999999985 9988754                   22455566666654  4577777778


Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           70 VSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        70 v~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      + +++...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            8 3555566653       6899998754

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.91  E-value=0.18  Score=41.49  Aligned_cols=169  Identities=18%  Similarity=0.209  Sum_probs=99.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHH-HcCCeEEEEe--C-----CchhH----HHHHHHHHh-cCCeEEEEEecCCCHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLG-LEGASVVVSS--R-----KQKNV----DEAVVKLKA-RGIEVIGVVCHVSNGQQRKN   78 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~-~~G~~V~~~~--r-----~~~~~----~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~   78 (255)
                      .|+|||.|+|+|.|.+.--..+ --|+.-+.+.  |     ++-..    +...++..+ .+--..-+..|..+.|--+.
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~k  120 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQK  120 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHH
Confidence            4899999999999988544433 1344433332  1     11100    111222222 24345557789998888899


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCC---------------------------------CccCCCHHHHHHHHHHHhHHH
Q 025273           79 LINQTIEKFGKIDVVVSNAAANPSVD---------------------------------SILQTKESVLDKLWDINVKSS  125 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~---------------------------------~~~~~~~~~~~~~~~~n~~~~  125 (255)
                      +++.++..+|.+|.+|+.-+......                                 .++..+.++++.+..+.=---
T Consensus       121 vIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGeD  200 (398)
T COG3007         121 VIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGED  200 (398)
T ss_pred             HHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcch
Confidence            99999999999999997655322111                                 133344555665533321111


Q ss_pred             HH-HHHHHhh--cccCCCeEEEEcccCccC--CCCCChhhHhhHHHHHHHHHHHHHHhCC
Q 025273          126 IL-LLQDAAP--HLQKGSSVVLISSIAGYQ--PQSSMAMYGVTKTALLGLTKALAAEMAP  180 (255)
Q Consensus       126 ~~-~~~~~~~--~~~~~~~iv~iss~~~~~--~~~~~~~y~~sK~a~~~l~~~la~e~~~  180 (255)
                      |. .+++++.  .+.++.+-+-.|......  |.-.....+.+|.-+..-+..+...+.+
T Consensus       201 Wq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~  260 (398)
T COG3007         201 WQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAA  260 (398)
T ss_pred             HHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHh
Confidence            11 1233332  234666666666555433  2334556789999999888888888865

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.91  E-value=0.0044  Score=59.78  Aligned_cols=77  Identities=23%  Similarity=0.236  Sum_probs=60.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCe-------------EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE-GAS-------------VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQR   76 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~-G~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   76 (255)
                      +.|+|+|.|+ |.+|+..++.|++. ++.             |++++++.+.++.+.+..    ..+..+++|+++.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSESL  642 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHHH
Confidence            4678999997 99999999999875 333             888999987766655543    2566789999999888


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCC
Q 025273           77 KNLINQTIEKFGKIDVVVSNAAA   99 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      .++++       .+|++|++...
T Consensus       643 ~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        643 LKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHhhc-------CCCEEEECCCc
Confidence            77765       68999998875

>PLN02494 adenosylhomocysteinase

Probab=96.91  E-value=0.012  Score=51.81  Aligned_cols=92  Identities=21%  Similarity=0.382  Sum_probs=62.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +.||+++|.|.+ .||+.+++.+...|++|+++++++.......    ..+..+  +     +   ++++++       .
T Consensus       252 LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~----~~G~~v--v-----~---leEal~-------~  309 (477)
T PLN02494        252 IAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICALQAL----MEGYQV--L-----T---LEDVVS-------E  309 (477)
T ss_pred             cCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhhHHHH----hcCCee--c-----c---HHHHHh-------h
Confidence            689999999976 8999999999999999999999875432211    112121  1     1   222222       5


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      .|++|.+.|...                         .+....+..|++++.++|++..
T Consensus       310 ADVVI~tTGt~~-------------------------vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        310 ADIFVTTTGNKD-------------------------IIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             CCEEEECCCCcc-------------------------chHHHHHhcCCCCCEEEEcCCC
Confidence            799998766321                         0123456778888999999764

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=96.90  E-value=0.022  Score=43.78  Aligned_cols=80  Identities=24%  Similarity=0.237  Sum_probs=62.0

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +..+++||+|+=.||+.|+   ++-..+..|+ .|++++.+++.++-.++...+..+++.++.+|+++-..         
T Consensus        40 ~~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~~---------  107 (198)
T COG2263          40 LRGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFRG---------  107 (198)
T ss_pred             HcCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcCC---------
Confidence            3567999999999987664   2222334675 59999999999998888887778899999999986544         


Q ss_pred             HHhCCCCEEEEcCCCCC
Q 025273           85 EKFGKIDVVVSNAAANP  101 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~  101 (255)
                          ++|.+|.|.-+..
T Consensus       108 ----~~dtvimNPPFG~  120 (198)
T COG2263         108 ----KFDTVIMNPPFGS  120 (198)
T ss_pred             ----ccceEEECCCCcc
Confidence                8899999986544

>PLN00203 glutamyl-tRNA reductase

Probab=96.89  E-value=0.0055  Score=55.08  Aligned_cols=76  Identities=17%  Similarity=0.227  Sum_probs=54.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++.+++++|.|+ |.+|+.+++.|...|+ +|+++.|+.+..+.+.+++.  +..+.+     ...++..+.+       
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~-----~~~~dl~~al-------  327 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIY-----KPLDEMLACA-------  327 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEe-----ecHhhHHHHH-------
Confidence            378999999999 9999999999999997 59999999888877766552  111111     1122222222       


Q ss_pred             CCCCEEEEcCCC
Q 025273           88 GKIDVVVSNAAA   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                      ...|++|.+.+.
T Consensus       328 ~~aDVVIsAT~s  339 (519)
T PLN00203        328 AEADVVFTSTSS  339 (519)
T ss_pred             hcCCEEEEccCC
Confidence            267999988764

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.87  E-value=0.0089  Score=49.11  Aligned_cols=116  Identities=15%  Similarity=0.108  Sum_probs=67.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcC----CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           15 AIVTASTQGIGFGIAERLGLEG----ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +.|.|++|.+|..++..|+..|    .+|+++|++++.++....++.......  ....++...+..+.       +..-
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~-------~~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEA-------FKDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHH-------hCCC
Confidence            4689998899999999999998    679999999988777766665431111  01111111111122       2378


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      |++|..+|.....    ..+.   ...+..|+--...+.+.+.++- +.+.++++|-
T Consensus        72 DiVv~t~~~~~~~----g~~r---~~~~~~n~~i~~~i~~~i~~~~-p~a~~i~~tN  120 (263)
T cd00650          72 DVVIITAGVGRKP----GMGR---LDLLKRNVPIVKEIGDNIEKYS-PDAWIIVVSN  120 (263)
T ss_pred             CEEEECCCCCCCc----CCCH---HHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecC
Confidence            9999999975422    2222   1223333333333333333222 5567777764

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.87  E-value=0.0054  Score=51.71  Aligned_cols=73  Identities=23%  Similarity=0.330  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +.+++++|.|+ |.+|+.+++.|...| ..|++++|+.++.+.+++++.   ..  .     .+.+++.+.+       .
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g---~~--~-----~~~~~~~~~l-------~  237 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG---GN--A-----VPLDELLELL-------N  237 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC---Ce--E-----EeHHHHHHHH-------h
Confidence            67999999987 999999999999877 569999999887776666552   21  1     1122333332       2


Q ss_pred             CCCEEEEcCCCC
Q 025273           89 KIDVVVSNAAAN  100 (255)
Q Consensus        89 ~~d~lv~~ag~~  100 (255)
                      ..|++|.+.+..
T Consensus       238 ~aDvVi~at~~~  249 (311)
T cd05213         238 EADVVISATGAP  249 (311)
T ss_pred             cCCEEEECCCCC
Confidence            579999998853

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.86  E-value=0.0059  Score=51.41  Aligned_cols=115  Identities=14%  Similarity=0.152  Sum_probs=68.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCe--EEEEeCCc--hhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGAS--VVVSSRKQ--KNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~--V~~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +++.|+|++|.+|..++..|+..|..  |++++|+.  +.++....++...    +...   ....+..  .+.      
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d--~~~------   69 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSD--LSD------   69 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCC--HHH------
Confidence            46899999999999999999999865  99999965  4444333333221    1111   1111111  111      


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                        +..-|++|.++|....    .+.+.   .+.+..|+.-...+.+.+.+.. +.+.++++++.
T Consensus        70 --l~~aDiViitag~p~~----~~~~r---~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~np  123 (309)
T cd05294          70 --VAGSDIVIITAGVPRK----EGMSR---LDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNP  123 (309)
T ss_pred             --hCCCCEEEEecCCCCC----CCCCH---HHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCc
Confidence              2378999999996431    22332   2334555555555555544433 45678888764

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=96.84  E-value=0.013  Score=50.08  Aligned_cols=100  Identities=21%  Similarity=0.266  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG-   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   88 (255)
                      .|++++|+|+ +++|..+++.+...|+ .|++++++.+..+.+ .++   +....   .|-.+.+-    .+++.+..+ 
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~---ga~~~---i~~~~~~~----~~~l~~~~~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL---GATIV---LDPTEVDV----VAEVRKLTGG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCEE---ECCCccCH----HHHHHHHhCC
Confidence            5789999985 8999999999999999 788888887765533 222   33222   24333322    223333222 


Q ss_pred             -CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           89 -KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                       .+|+++.+.|...                          ..+..+..++.+|+++.++..
T Consensus       240 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  274 (351)
T cd08233         240 GGVDVSFDCAGVQA--------------------------TLDTAIDALRPRGTAVNVAIW  274 (351)
T ss_pred             CCCCEEEECCCCHH--------------------------HHHHHHHhccCCCEEEEEccC
Confidence             4999999987310                          223345566788999998864

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.83  E-value=0.0029  Score=56.45  Aligned_cols=47  Identities=15%  Similarity=0.282  Sum_probs=40.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (255)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            467899999996 79999999999999999999999987776665543

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.82  E-value=0.0063  Score=50.88  Aligned_cols=79  Identities=14%  Similarity=0.199  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++++++|+|+++++|.++++.+...|++|+++.++++..+.+ .+   .+.+..   .+....+..+.+.+.. . .+.+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~---~~~~~~~~~~~~~~~~-~-~~~~  209 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EA---LGADIA---INYREEDFVEVVKAET-G-GKGV  209 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCcEE---EecCchhHHHHHHHHc-C-CCCe
Confidence            578999999999999999999999999999999887665432 22   222211   2333333222222111 1 1259


Q ss_pred             CEEEEcCC
Q 025273           91 DVVVSNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      |.+++++|
T Consensus       210 d~~i~~~~  217 (325)
T TIGR02824       210 DVILDIVG  217 (325)
T ss_pred             EEEEECCc
Confidence            99999877

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.82  E-value=0.015  Score=50.95  Aligned_cols=44  Identities=11%  Similarity=0.080  Sum_probs=35.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC---eEEEEeCCchhHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA---SVVVSSRKQKNVDEAVV   54 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~   54 (255)
                      .|.+|+|.|++|++|..+++.+...|.   +|++++++.++++..++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            468999999999999998887777654   69999999887765544

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=96.82  E-value=0.014  Score=49.85  Aligned_cols=101  Identities=15%  Similarity=0.142  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|++|+|+| .|++|..+++.+...|++ |++++++.++.+.+ +++   +... +  .|..+.. .+++.+.. . -..
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~---Ga~~-~--i~~~~~~-~~~~~~~~-~-~~~  228 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSL---GAMQ-T--FNSREMS-APQIQSVL-R-ELR  228 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCce-E--ecCcccC-HHHHHHHh-c-CCC
Confidence            578999997 599999999988889997 67888887765543 222   3221 1  1222211 22222211 1 125


Q ss_pred             CC-EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           90 ID-VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        90 ~d-~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      +| ++|.++|...                          .+..++..++++|+++.++..
T Consensus       229 ~d~~v~d~~G~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  262 (347)
T PRK10309        229 FDQLILETAGVPQ--------------------------TVELAIEIAGPRAQLALVGTL  262 (347)
T ss_pred             CCeEEEECCCCHH--------------------------HHHHHHHHhhcCCEEEEEccC
Confidence            77 7888877411                          122345666788999998754

>PLN02827 Alcohol dehydrogenase-like

Probab=96.82  E-value=0.016  Score=50.18  Aligned_cols=79  Identities=15%  Similarity=0.265  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   88 (255)
                      .|.+|||.|+ |++|..+++.+...|+. |+++++++++.+.+ +++   +....   .|..+. +...+.+.++.  .+
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l---Ga~~~---i~~~~~~~~~~~~v~~~~--~~  262 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF---GVTDF---INPNDLSEPIQQVIKRMT--GG  262 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCcEE---EcccccchHHHHHHHHHh--CC
Confidence            4889999985 99999999988889985 77778777655433 222   33221   233321 23333333322  13


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|+++.+.|.
T Consensus       263 g~d~vid~~G~  273 (378)
T PLN02827        263 GADYSFECVGD  273 (378)
T ss_pred             CCCEEEECCCC
Confidence            69999999884

>PRK07574 formate dehydrogenase; Provisional

Probab=96.81  E-value=0.008  Score=52.02  Aligned_cols=99  Identities=17%  Similarity=0.231  Sum_probs=64.7

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..++||++.|.|. |.||+++++.|...|++|+..+|.....+. .++.            ++....+++++++      
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~-~~~~------------g~~~~~~l~ell~------  247 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEV-EQEL------------GLTYHVSFDSLVS------  247 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhh-Hhhc------------CceecCCHHHHhh------
Confidence            4589999999987 679999999999999999999988633221 1111            1111123444444      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                       .-|+|+.+.....          + -+.+          +....+..|+++..+||++-.
T Consensus       248 -~aDvV~l~lPlt~----------~-T~~l----------i~~~~l~~mk~ga~lIN~aRG  286 (385)
T PRK07574        248 -VCDVVTIHCPLHP----------E-TEHL----------FDADVLSRMKRGSYLVNTARG  286 (385)
T ss_pred             -cCCEEEEcCCCCH----------H-HHHH----------hCHHHHhcCCCCcEEEECCCC
Confidence             6799988766432          1 1111          234567788888888888743

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.81  E-value=0.013  Score=49.27  Aligned_cols=78  Identities=22%  Similarity=0.265  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      .|.++||.|+++++|.++++.....|++|+.+.++.+..+.+.+ +   +.... +  |-.+. +..   +++.+..  .
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~~~-~--~~~~~-~~~---~~i~~~~~~~  207 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIGPV-V--STEQP-GWQ---DKVREAAGGA  207 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCCEE-E--cCCCc-hHH---HHHHHHhCCC
Confidence            47899999999999999999999999999999888766544432 2   22211 1  22222 222   2222222  2


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|.++.+.|.
T Consensus       208 ~~d~v~d~~g~  218 (324)
T cd08292         208 PISVALDSVGG  218 (324)
T ss_pred             CCcEEEECCCC
Confidence            59999998773

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=96.81  E-value=0.017  Score=49.11  Aligned_cols=77  Identities=17%  Similarity=0.233  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      ++.++||.|+++++|.++++.+.+.|++|+.+.+++++.+.+ +++   +...   ..+..+.+..++    +.+..  +
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---v~~~~~~~~~~~----~~~~~~~~  233 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL---GADA---FVDFKKSDDVEA----VKELTGGG  233 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCcE---EEcCCCccHHHH----HHHHhcCC
Confidence            478999999999999999999999999999999987665433 222   2221   123333222222    22222  3


Q ss_pred             CCCEEEEcCC
Q 025273           89 KIDVVVSNAA   98 (255)
Q Consensus        89 ~~d~lv~~ag   98 (255)
                      .+|.++++.+
T Consensus       234 ~vd~vl~~~~  243 (341)
T cd08297         234 GAHAVVVTAV  243 (341)
T ss_pred             CCCEEEEcCC
Confidence            6999998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK14967 putative methyltransferase; Provisional

Probab=96.79  E-value=0.042  Score=43.93  Aligned_cols=122  Identities=23%  Similarity=0.253  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .+.++|-.|+++|.   ++..+++.|. +|+.++.++..++..++.+...+.++.++..|+.+.      +.     -+.
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~~-----~~~  101 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------VE-----FRP  101 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------cc-----CCC
Confidence            35789999987654   3444555676 799999999887776666655555677777776431      11     137


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHh---HHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINV---KSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~---~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      .|.++.|..+..... . ..........+..-.   ...-.+++.+...++++|+++++.+.
T Consensus       102 fD~Vi~npPy~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~~  161 (223)
T PRK14967        102 FDVVVSNPPYVPAPP-D-APPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQSE  161 (223)
T ss_pred             eeEEEECCCCCCCCc-c-cccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            899999987643211 0 000000111111100   11223455666788899998887654

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.78  E-value=0.014  Score=50.72  Aligned_cols=73  Identities=21%  Similarity=0.319  Sum_probs=55.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +|+++++||.|+ |-+|.-++++|+++|. .|+++.|+.++++.+++++.          .+....+++...+.      
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~----------~~~~~l~el~~~l~------  237 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG----------AEAVALEELLEALA------  237 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC----------CeeecHHHHHHhhh------
Confidence            488999999986 5789999999999994 59999999999998888774          12222334333333      


Q ss_pred             CCCCEEEEcCCC
Q 025273           88 GKIDVVVSNAAA   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                       ..|++|.+.|-
T Consensus       238 -~~DvVissTsa  248 (414)
T COG0373         238 -EADVVISSTSA  248 (414)
T ss_pred             -hCCEEEEecCC
Confidence             67888887664

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=96.76  E-value=0.023  Score=48.15  Aligned_cols=100  Identities=17%  Similarity=0.240  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .++++||.| ++.+|.++++.+...|++|+.+++++++.+.+ +++   +.+..   .|..+.+ ..+.+.+.    +.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~---g~~~~---i~~~~~~-~~~~~~~~----~~~  229 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKL---GAHHY---IDTSKED-VAEALQEL----GGA  229 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHc---CCcEE---ecCCCcc-HHHHHHhc----CCC
Confidence            478999999 79999999999989999999999987665544 333   32211   1332222 22222221    368


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |.++.+.|...                          .....++.++.+|+++.++...
T Consensus       230 d~vi~~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  262 (333)
T cd08296         230 KLILATAPNAK--------------------------AISALVGGLAPRGKLLILGAAG  262 (333)
T ss_pred             CEEEECCCchH--------------------------HHHHHHHHcccCCEEEEEecCC
Confidence            99998765211                          1223455667788999887643

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.76  E-value=0.022  Score=49.17  Aligned_cols=79  Identities=15%  Similarity=0.318  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   88 (255)
                      .|.+|||.|+ |++|..+++.+...|+ +|++++++.++.+.+ +++   +....   .|..+. +++.+.+.++..  +
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~---Ga~~~---i~~~~~~~~~~~~v~~~~~--~  256 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF---GVTEF---VNPKDHDKPVQEVIAEMTG--G  256 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCceE---EcccccchhHHHHHHHHhC--C
Confidence            5789999985 8999999998888998 699999987765543 222   32222   133221 234443333322  3


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|+++.+.|.
T Consensus       257 ~~d~vid~~G~  267 (369)
T cd08301         257 GVDYSFECTGN  267 (369)
T ss_pred             CCCEEEECCCC
Confidence            69999998773

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.75  E-value=0.016  Score=48.86  Aligned_cols=99  Identities=24%  Similarity=0.172  Sum_probs=63.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ++++||.|+++++|.++++.....|++|++++++.++.+.+ +++   +....   .|..+. . .+.+.+..  -+.+|
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v---~~~~~~-~-~~~~~~~~--~~~~d  215 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKL---GAKEV---IPREEL-Q-EESIKPLE--KQRWA  215 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHc---CCCEE---EcchhH-H-HHHHHhhc--cCCcC
Confidence            67999999999999999999999999999999987765544 222   32211   122221 1 12222221  13589


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      .++.+.|. .                          .....+..++.+|+++.++..
T Consensus       216 ~vld~~g~-~--------------------------~~~~~~~~l~~~G~~i~~g~~  245 (326)
T cd08289         216 GAVDPVGG-K--------------------------TLAYLLSTLQYGGSVAVSGLT  245 (326)
T ss_pred             EEEECCcH-H--------------------------HHHHHHHHhhcCCEEEEEeec
Confidence            99888762 1                          112234556778899988754

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PLN03139 formate dehydrogenase; Provisional

Probab=96.75  E-value=0.009  Score=51.69  Aligned_cols=98  Identities=16%  Similarity=0.185  Sum_probs=63.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++||++.|.| .|.||+++++.|...|++|+..+|+....+.. ++.            ++...+++++++.      
T Consensus       195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~-~~~------------g~~~~~~l~ell~------  254 (386)
T PLN03139        195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELE-KET------------GAKFEEDLDAMLP------  254 (386)
T ss_pred             cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhH-hhc------------CceecCCHHHHHh------
Confidence            468999999999 57899999999999999999998875332211 110            1111123445544      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       ..|+++.+.....          + -..+          +.+..+..|+++..+||++-
T Consensus       255 -~sDvV~l~lPlt~----------~-T~~l----------i~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        255 -KCDVVVINTPLTE----------K-TRGM----------FNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             -hCCEEEEeCCCCH----------H-HHHH----------hCHHHHhhCCCCeEEEECCC
Confidence             5799888754221          1 1111          13456778888888888763

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=96.74  E-value=0.0065  Score=43.91  Aligned_cols=90  Identities=23%  Similarity=0.393  Sum_probs=61.3

Q ss_pred             chHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC--CCCEEEEcCCCC
Q 025273           23 GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG--KIDVVVSNAAAN  100 (255)
Q Consensus        23 giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~~d~lv~~ag~~  100 (255)
                      |||...++.+...|++|+++++++++.+.++ +   .+....   .|-.+.+    +.+++.+..+  .+|++|.++|..
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~---~Ga~~~---~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~~   69 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-E---LGADHV---IDYSDDD----FVEQIRELTGGRGVDVVIDCVGSG   69 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-H---TTESEE---EETTTSS----HHHHHHHHTTTSSEEEEEESSSSH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-h---hccccc---ccccccc----cccccccccccccceEEEEecCcH
Confidence            6899999999999999999999987755433 2   232222   3444443    4444545443  699999999831


Q ss_pred             CCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273          101 PSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      .                          ..+..+..++++|+++.++...
T Consensus        70 ~--------------------------~~~~~~~~l~~~G~~v~vg~~~   92 (130)
T PF00107_consen   70 D--------------------------TLQEAIKLLRPGGRIVVVGVYG   92 (130)
T ss_dssp             H--------------------------HHHHHHHHEEEEEEEEEESSTS
T ss_pred             H--------------------------HHHHHHHHhccCCEEEEEEccC
Confidence            1                          3344556778889999998765

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.74  E-value=0.012  Score=46.14  Aligned_cols=36  Identities=22%  Similarity=0.435  Sum_probs=30.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRK   45 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~   45 (255)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            467889999985 45999999999999976 8888755

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK08223 hypothetical protein; Validated

Probab=96.74  E-value=0.013  Score=48.40  Aligned_cols=36  Identities=14%  Similarity=0.142  Sum_probs=31.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRK   45 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~   45 (255)
                      .|++.+|+|.|+ ||+|..+++.|++.|.. +.++|.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            477889999986 58999999999999975 8888876

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=96.73  E-value=0.026  Score=49.11  Aligned_cols=43  Identities=14%  Similarity=0.188  Sum_probs=36.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   52 (255)
                      .++.+++|+|+++++|.++++.+...|+++++++++.++.+.+
T Consensus       192 ~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         192 KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            3478999999999999999988888999988888887665544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.72  E-value=0.029  Score=47.28  Aligned_cols=103  Identities=17%  Similarity=0.262  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .++.+++|.|+++++|.++++.....|++|+.++++.+..+.+ +++   +... +  .|..+ .+..+.+.+...  +.
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-v--~~~~~-~~~~~~~~~~~~--~~  207 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCDR-P--INYKT-EDLGEVLKKEYP--KG  207 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCce-E--EeCCC-ccHHHHHHHhcC--CC
Confidence            3578999999999999999998888999999998887654433 222   2211 1  22222 222222322211  36


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      +|.++++.|. .                          .....+..++.+|++|.++...
T Consensus       208 vd~v~~~~g~-~--------------------------~~~~~~~~l~~~g~~v~~g~~~  240 (329)
T cd08250         208 VDVVYESVGG-E--------------------------MFDTCVDNLALKGRLIVIGFIS  240 (329)
T ss_pred             CeEEEECCcH-H--------------------------HHHHHHHHhccCCeEEEEeccc
Confidence            8999988762 1                          1122345566788999887654

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.70  E-value=0.029  Score=48.13  Aligned_cols=103  Identities=17%  Similarity=0.258  Sum_probs=62.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (255)
                      .|.++||+| ++++|.++++.+...|+ +|++++++++..+.+ +++   +....+   |..+.. ..+..+.+.+..  
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~---g~~~vi---~~~~~~-~~~~~~~i~~~~~~  247 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REF---GADATI---DIDELP-DPQRRAIVRDITGG  247 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCCeEE---cCcccc-cHHHHHHHHHHhCC
Confidence            688999997 59999999998888999 899998887654433 222   322211   222111 111111222222  


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      ..+|+++++.|...                          ..+..+..++.+|+++.++..
T Consensus       248 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  282 (361)
T cd08231         248 RGADVVIEASGHPA--------------------------AVPEGLELLRRGGTYVLVGSV  282 (361)
T ss_pred             CCCcEEEECCCChH--------------------------HHHHHHHHhccCCEEEEEcCC
Confidence            26899999877311                          122234566778899988754

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.68  E-value=0.021  Score=49.26  Aligned_cols=36  Identities=17%  Similarity=0.374  Sum_probs=31.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK   45 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~   45 (255)
                      .+++.+|+|.|+ ||+|..+++.|++.|. +++++|.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            477889999986 6999999999999996 59999876

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.68  E-value=0.014  Score=48.92  Aligned_cols=76  Identities=13%  Similarity=0.237  Sum_probs=48.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCch-------------------hHHHHHHHHHhc--CCeEEEEEecCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQK-------------------NVDEAVVKLKAR--GIEVIGVVCHVS   71 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~-------------------~~~~~~~~~~~~--~~~~~~~~~Dv~   71 (255)
                      +|||.|+ ||+|.++++.|+..|.. +.++|.+.-                   +.+.+++.+.+.  ..++..+..+++
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            4788886 89999999999999976 888886532                   333344444443  345555566666


Q ss_pred             CHHHHHHHHHHHHHHhCCCCEEEEcC
Q 025273           72 NGQQRKNLINQTIEKFGKIDVVVSNA   97 (255)
Q Consensus        72 ~~~~v~~~~~~~~~~~g~~d~lv~~a   97 (255)
                      +.....+++       ...|++|++.
T Consensus        80 ~~~~~~~f~-------~~~DvVv~a~   98 (312)
T cd01489          80 DPDFNVEFF-------KQFDLVFNAL   98 (312)
T ss_pred             CccchHHHH-------hcCCEEEECC
Confidence            532222222       2577777664

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=96.67  E-value=0.026  Score=45.05  Aligned_cols=105  Identities=16%  Similarity=0.108  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-------------cCCeEEEEEecCCCHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-------------RGIEVIGVVCHVSNGQQRK   77 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~Dv~~~~~v~   77 (255)
                      ++.+||+.|++.|   .-+..|+++|++|+.++.++..++...++-..             ...++.++++|+.+...  
T Consensus        37 ~~~rvL~~gCG~G---~da~~LA~~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~--  111 (218)
T PRK13255         37 AGSRVLVPLCGKS---LDMLWLAEQGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTA--  111 (218)
T ss_pred             CCCeEEEeCCCCh---HhHHHHHhCCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCc--
Confidence            4679999998776   45778899999999999999888875432110             13467778888876532  


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           78 NLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                             ...+.+|.++-.+....       .+++...           ...+.+..+++++|.++.+
T Consensus       112 -------~~~~~fd~v~D~~~~~~-------l~~~~R~-----------~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        112 -------ADLADVDAVYDRAALIA-------LPEEMRE-----------RYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             -------ccCCCeeEEEehHhHhh-------CCHHHHH-----------HHHHHHHHHcCCCCeEEEE
Confidence                   11235677665543221       2233222           2345566777888764443

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.66  E-value=0.0095  Score=49.88  Aligned_cols=43  Identities=21%  Similarity=0.414  Sum_probs=37.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   52 (255)
                      .++++++|+|+++++|+++++.+...|++|++++++.+..+.+
T Consensus       143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         143 RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            3578999999999999999999999999999999887655544

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.66  E-value=0.039  Score=48.56  Aligned_cols=114  Identities=14%  Similarity=0.049  Sum_probs=73.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc-------CC--eEEEEeCCchhHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLE-------GA--SVVVSSRKQKNVDEAVVKLKARG----IEVIGVVCHVSNGQQRKNL   79 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~-------G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~   79 (255)
                      -+|.|+|++|.+|.+++..|+..       |.  ++++++++.+.++...-++....    .++.+ ..  .+.      
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~y------  171 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DPY------  171 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CCH------
Confidence            46999999999999999999987       64  69999999998887776665431    11111 11  111      


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                           +.+..-|++|..||....    ...+   -.+.++.|..=.-.+.+.+.++-.+.+.++++|-
T Consensus       172 -----e~~kdaDiVVitAG~prk----pG~t---R~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        172 -----EVFQDAEWALLIGAKPRG----PGME---RADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             -----HHhCcCCEEEECCCCCCC----CCCC---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence                 223478999999997432    1233   3345566665555555555543335667777774

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.64  E-value=0.026  Score=45.71  Aligned_cols=37  Identities=11%  Similarity=0.276  Sum_probs=31.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ   46 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~   46 (255)
                      .+++.+|+|.|+ ||+|..+++.|++.|.. ++++|.+.
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            477889999975 69999999999999965 88888763

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=96.64  E-value=0.03  Score=48.13  Aligned_cols=98  Identities=19%  Similarity=0.217  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|.+++|.| +|++|..+++.+...|++|++++++.++.+...+++   +....   .|-.+.+.+.       +..+.+
T Consensus       180 ~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~---Ga~~~---i~~~~~~~~~-------~~~~~~  245 (357)
T PLN02514        180 SGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHL---GADDY---LVSSDAAEMQ-------EAADSL  245 (357)
T ss_pred             CCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhc---CCcEE---ecCCChHHHH-------HhcCCC
Confidence            578999996 599999999888888999988888766544443332   33221   1222222222       112368


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      |+++.+.|...                          ..+..+..++++|+++.++..
T Consensus       246 D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  277 (357)
T PLN02514        246 DYIIDTVPVFH--------------------------PLEPYLSLLKLDGKLILMGVI  277 (357)
T ss_pred             cEEEECCCchH--------------------------HHHHHHHHhccCCEEEEECCC
Confidence            99999877311                          112234556788999998864

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=96.63  E-value=0.026  Score=47.62  Aligned_cols=77  Identities=18%  Similarity=0.189  Sum_probs=48.0

Q ss_pred             CCCEE-EEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--
Q 025273           11 QGKVA-IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (255)
Q Consensus        11 ~~k~v-lItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (255)
                      .+..+ +++||+|++|..+++.....|++|++++++.++.+.+++    .+....+   |..+.+-.+    ++.+..  
T Consensus       142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~----~g~~~~i---~~~~~~~~~----~v~~~~~~  210 (324)
T cd08291         142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK----IGAEYVL---NSSDPDFLE----DLKELIAK  210 (324)
T ss_pred             CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCcEEE---ECCCccHHH----HHHHHhCC
Confidence            34444 455999999999988877889999999988766554432    2333222   222222222    222222  


Q ss_pred             CCCCEEEEcCC
Q 025273           88 GKIDVVVSNAA   98 (255)
Q Consensus        88 g~~d~lv~~ag   98 (255)
                      ..+|+++++.|
T Consensus       211 ~~~d~vid~~g  221 (324)
T cd08291         211 LNATIFFDAVG  221 (324)
T ss_pred             CCCcEEEECCC
Confidence            25999999877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.63  E-value=0.027  Score=46.85  Aligned_cols=42  Identities=21%  Similarity=0.377  Sum_probs=36.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   52 (255)
                      +|.+++|.|+++++|.++++.+...|++|+.++++.+..+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999999999999999998887665443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.63  E-value=0.041  Score=46.60  Aligned_cols=118  Identities=14%  Similarity=0.093  Sum_probs=68.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEeCCc--hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      -+|.|+|++|.+|.+++..|...|.       .++++|++.  +.++....++..... . ... +..-...       -
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~-~-~~~-~~~i~~~-------~   73 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAF-P-LLA-GVVATTD-------P   73 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccc-c-ccC-CcEEecC-------h
Confidence            4689999999999999999998874       799999965  334544444432210 0 000 1100001       1


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .+.+..-|++|..||....    ...+   -.+.+..|..-.-.+.+.+.++-.+.+.++++|-
T Consensus        74 ~~~~~daDvVVitAG~~~k----~g~t---R~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        74 EEAFKDVDAALLVGAFPRK----PGME---RADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             HHHhCCCCEEEEeCCCCCC----CCCc---HHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            1223478999999997432    2233   3345566665555555554444323667777763

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=96.62  E-value=0.015  Score=49.17  Aligned_cols=95  Identities=19%  Similarity=0.249  Sum_probs=64.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++||++-|.| .|.||+++++.+...|.+|+..+|.+. .+ ..++.            +...-+ ++++++      
T Consensus       142 ~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~-~~~~~------------~~~y~~-l~ell~------  199 (324)
T COG1052         142 FDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN-PE-AEKEL------------GARYVD-LDELLA------  199 (324)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC-hH-HHhhc------------Cceecc-HHHHHH------
Confidence            468999999997 688999999999988999999998875 12 11111            111112 555555      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                       .-|+++.++.....                     ..-.+....+..|+++..+||++
T Consensus       200 -~sDii~l~~Plt~~---------------------T~hLin~~~l~~mk~ga~lVNta  236 (324)
T COG1052         200 -ESDIISLHCPLTPE---------------------TRHLINAEELAKMKPGAILVNTA  236 (324)
T ss_pred             -hCCEEEEeCCCChH---------------------HhhhcCHHHHHhCCCCeEEEECC
Confidence             57998876654331                     11223445577889888999886

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.61  E-value=0.01  Score=47.58  Aligned_cols=36  Identities=25%  Similarity=0.372  Sum_probs=33.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe---EEEEeCC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS---VVVSSRK   45 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~---V~~~~r~   45 (255)
                      ++++++++|.|+ |+.|+++++.|.+.|.+   |++++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            588999999998 89999999999999975   9999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional

Probab=96.61  E-value=0.43  Score=41.69  Aligned_cols=153  Identities=17%  Similarity=0.082  Sum_probs=90.0

Q ss_pred             CCCEEEEEc-CCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTA-STQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        11 ~~k~vlItG-a~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ++++||=.| ++|+++.+.    +..|+ +|+.++.++..++...+.+...+   .++.++..|+.+      .+.+...
T Consensus       220 ~g~rVLDlfsgtG~~~l~a----a~~ga~~V~~VD~s~~al~~a~~N~~~Ngl~~~~v~~i~~D~~~------~l~~~~~  289 (396)
T PRK15128        220 ENKRVLNCFSYTGGFAVSA----LMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFK------LLRTYRD  289 (396)
T ss_pred             CCCeEEEeccCCCHHHHHH----HhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCcEEEEEccHHH------HHHHHHh
Confidence            578888555 456655432    23555 79999999999888777776553   368888888742      2222222


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      .-++.|++|.++-.....+       ....    .-..+...+.+.+.++++++|.++..|. +++.          +..
T Consensus       290 ~~~~fDlVilDPP~f~~~k-------~~l~----~~~~~y~~l~~~a~~lLk~gG~lv~~sc-s~~~----------~~~  347 (396)
T PRK15128        290 RGEKFDVIVMDPPKFVENK-------SQLM----GACRGYKDINMLAIQLLNPGGILLTFSC-SGLM----------TSD  347 (396)
T ss_pred             cCCCCCEEEECCCCCCCCh-------HHHH----HHHHHHHHHHHHHHHHcCCCeEEEEEeC-CCcC----------CHH
Confidence            2347999999877654211       1111    1122344455667788888877776553 2221          224


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEEeCCcccCC
Q 025273          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (255)
Q Consensus       166 a~~~l~~~la~e~~~~v~v~~v~pg~v~t~  195 (255)
                      ....++...+.+.+..+++.....-+-|=|
T Consensus       348 ~f~~~v~~aa~~~~~~~~~l~~~~~~~DhP  377 (396)
T PRK15128        348 LFQKIIADAAIDAGRDVQFIEQFRQAADHP  377 (396)
T ss_pred             HHHHHHHHHHHHcCCeEEEEEEcCCCCCCC
Confidence            444555555555555677776654343444

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.60  E-value=0.0092  Score=42.30  Aligned_cols=71  Identities=27%  Similarity=0.276  Sum_probs=51.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV   94 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv   94 (255)
                      ++|.|. +.+|+.+++.|.+.+..|++++++++..+.+.    ..+  +.++..|.++++.++++-      ..+.+.+|
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~----~~~--~~~i~gd~~~~~~l~~a~------i~~a~~vv   67 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR----EEG--VEVIYGDATDPEVLERAG------IEKADAVV   67 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HTT--SEEEES-TTSHHHHHHTT------GGCESEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH----hcc--cccccccchhhhHHhhcC------ccccCEEE
Confidence            567777 47999999999997779999999987655443    333  567889999999877751      12677777


Q ss_pred             EcCC
Q 025273           95 SNAA   98 (255)
Q Consensus        95 ~~ag   98 (255)
                      ....
T Consensus        68 ~~~~   71 (116)
T PF02254_consen   68 ILTD   71 (116)
T ss_dssp             EESS
T ss_pred             EccC
Confidence            6644

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK05442 malate dehydrogenase; Provisional

Probab=96.59  E-value=0.013  Score=49.57  Aligned_cols=119  Identities=12%  Similarity=0.089  Sum_probs=67.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEeCCch--hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      .++|.|+|++|.+|..++..|...|.       .++++|++++  .++....++..... ...-...++.         .
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~-~~~~~~~i~~---------~   73 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAF-PLLAGVVITD---------D   73 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhh-hhcCCcEEec---------C
Confidence            36899999999999999999987663       6999998643  23333333322110 0000001110         1


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      ..+.+..-|++|.+||....    ...+   -.+.+..|..=.-.+.+.+.++-.+.+.++++|-
T Consensus        74 ~y~~~~daDiVVitaG~~~k----~g~t---R~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         74 PNVAFKDADVALLVGARPRG----PGME---RKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             hHHHhCCCCEEEEeCCCCCC----CCCc---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            11233478999999997432    1223   3344566665444455544443334567777773

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.59  E-value=0.017  Score=48.86  Aligned_cols=113  Identities=19%  Similarity=0.210  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +.+++.|.|| |.+|..++..++..| ..|+++|++++.++...-++...    +.... +.. -++.+.          
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d~~~----------   70 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNNYED----------   70 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCCHHH----------
Confidence            4578999997 889999999999988 68999999987654333222211    11111 111 112121          


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEccc
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSI  148 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~  148 (255)
                       +..-|++|.++|....    ...+.   ...+..|..    +.+.+.+.+.   +.+.++++|-.
T Consensus        71 -l~~ADiVVitag~~~~----~g~~r---~dll~~n~~----i~~~i~~~i~~~~p~a~vivvsNP  124 (319)
T PTZ00117         71 -IKDSDVVVITAGVQRK----EEMTR---EDLLTINGK----IMKSVAESVKKYCPNAFVICVTNP  124 (319)
T ss_pred             -hCCCCEEEECCCCCCC----CCCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCh
Confidence             2368999999986432    12222   334455652    3344444433   45567777643

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=96.59  E-value=0.031  Score=48.17  Aligned_cols=104  Identities=13%  Similarity=0.189  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   87 (255)
                      ..|.+++|.|+ |++|..+++.+...|+ +|+.++++.++.+.+ +++   +....   .|-.+. ..+.+.+.+...  
T Consensus       183 ~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~---ga~~~---i~~~~~~~~~~~~~~~~~~--  252 (365)
T cd08277         183 EPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEF---GATDF---INPKDSDKPVSEVIREMTG--  252 (365)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCcE---eccccccchHHHHHHHHhC--
Confidence            35789999974 9999999998888898 698999887765544 222   22211   122211 112222222222  


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-CCeEEEEcccC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIA  149 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv~iss~~  149 (255)
                      +.+|+++.+.|...                          .+...+..+++ .|+++.++...
T Consensus       253 ~g~d~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~  289 (365)
T cd08277         253 GGVDYSFECTGNAD--------------------------LMNEALESTKLGWGVSVVVGVPP  289 (365)
T ss_pred             CCCCEEEECCCChH--------------------------HHHHHHHhcccCCCEEEEEcCCC
Confidence            36999999887311                          22334556665 48999987643

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.58  E-value=0.029  Score=41.46  Aligned_cols=76  Identities=17%  Similarity=0.263  Sum_probs=48.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc-------------------hhHHHHHHHHHhcC--CeEEEEEecCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ-------------------KNVDEAVVKLKARG--IEVIGVVCHVS   71 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~~~Dv~   71 (255)
                      +|+|.|+ ||+|.++++.|++.|.. +.++|.+.                   .+.+.+++.+.+..  .++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4788887 89999999999999984 88887652                   23344445554443  34555555554


Q ss_pred             CHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           72 NGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        72 ~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      ... ..       +.+.+.|++|.+..
T Consensus        80 ~~~-~~-------~~~~~~diVi~~~d   98 (143)
T cd01483          80 EDN-LD-------DFLDGVDLVIDAID   98 (143)
T ss_pred             hhh-HH-------HHhcCCCEEEECCC
Confidence            322 11       22347888887755

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.58  E-value=0.037  Score=46.52  Aligned_cols=147  Identities=17%  Similarity=0.121  Sum_probs=81.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|.|+|++|.+|.+++..|+..|.  .++++|.+  .++...-++........+..+.  ..+++       .+.+..-|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~~~~~-------y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--GPEEL-------KKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--CCCch-------HHhcCCCC
Confidence            689999999999999999998884  69999998  3333333333221111111110  00111       12234789


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC-------cc-----CCCCCChh
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA-------GY-----QPQSSMAM  159 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~-------~~-----~~~~~~~~  159 (255)
                      ++|.+||....    ...+   -.+.++.|..-...+.+.+.++ .+.+.++++|-..       .+     .+.+....
T Consensus        71 ivvitaG~~~k----~g~t---R~dll~~N~~i~~~i~~~i~~~-~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~~rv  142 (310)
T cd01337          71 VVVIPAGVPRK----PGMT---RDDLFNINAGIVRDLATAVAKA-CPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRL  142 (310)
T ss_pred             EEEEeCCCCCC----CCCC---HHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCchhhHHHHHHHHHHHhcCCCHHHE
Confidence            99999997432    1222   3445566665555555555544 3566788877544       11     12232234


Q ss_pred             hHhhHHHHHHHHHHHHHHhC
Q 025273          160 YGVTKTALLGLTKALAAEMA  179 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~  179 (255)
                      ++.+-.=-..|-+.++.+++
T Consensus       143 iG~~~LDs~R~~~~la~~l~  162 (310)
T cd01337         143 FGVTTLDVVRANTFVAELLG  162 (310)
T ss_pred             EeeechHHHHHHHHHHHHhC
Confidence            44432222356666777764

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=96.56  E-value=0.057  Score=45.93  Aligned_cols=98  Identities=26%  Similarity=0.319  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +|.+++|+|+++++|.++++.....|++|+.+.++ +.. ...+++   +.+.   ..|..+.+..+.+    .. .+.+
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~-~~~~~~---g~~~---~~~~~~~~~~~~l----~~-~~~v  228 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAI-PLVKSL---GADD---VIDYNNEDFEEEL----TE-RGKF  228 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chH-HHHHHh---CCce---EEECCChhHHHHH----Hh-cCCC
Confidence            48999999999999999999988999998887765 222 222222   2221   2233333322222    22 2469


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      |.++++.|..                           ..+..++.+++.|+++.++..
T Consensus       229 d~vi~~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~  259 (350)
T cd08248         229 DVILDTVGGD---------------------------TEKWALKLLKKGGTYVTLVSP  259 (350)
T ss_pred             CEEEECCChH---------------------------HHHHHHHHhccCCEEEEecCC
Confidence            9999887731                           122234566778999988643

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK08328 hypothetical protein; Provisional

Probab=96.56  E-value=0.035  Score=44.67  Aligned_cols=37  Identities=16%  Similarity=0.312  Sum_probs=31.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ   46 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~   46 (255)
                      .+++++|+|.|+ ||+|.++++.|++.|.. ++++|.+.
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            477889999986 59999999999999975 88888664

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.55  E-value=0.011  Score=49.96  Aligned_cols=89  Identities=11%  Similarity=0.158  Sum_probs=61.0

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+.||++.|.|- |.||+++++.|...|.+|+..+|.... .           ..     +   ..+++++++       
T Consensus       145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~-~-----------~~-----~---~~~l~ell~-------  196 (317)
T PRK06487        145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRP-A-----------RP-----D---RLPLDELLP-------  196 (317)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCc-c-----------cc-----c---ccCHHHHHH-------
Confidence            589999999986 899999999999999999988875321 0           00     0   113444444       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      .-|+++.+.-....                     ..-.+.+..+..|+++..+||++
T Consensus       197 ~sDiv~l~lPlt~~---------------------T~~li~~~~~~~mk~ga~lIN~a  233 (317)
T PRK06487        197 QVDALTLHCPLTEH---------------------TRHLIGARELALMKPGALLINTA  233 (317)
T ss_pred             hCCEEEECCCCChH---------------------HhcCcCHHHHhcCCCCeEEEECC
Confidence            56998877664331                     11123344567888888888887

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.54  E-value=0.029  Score=44.05  Aligned_cols=36  Identities=17%  Similarity=0.412  Sum_probs=31.0

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRK   45 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~   45 (255)
                      .+++.+|+|.|+++ +|.++++.|+..|.. ++++|.+
T Consensus        16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence            46788999998766 999999999999976 8888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes

Probab=96.54  E-value=0.017  Score=46.00  Aligned_cols=129  Identities=16%  Similarity=0.129  Sum_probs=78.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-------------cCCeEEEEEecCCCHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-------------RGIEVIGVVCHVSNGQQRK   77 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~Dv~~~~~v~   77 (255)
                      .+.+|||-|++.|   .=+..|+++|++|+.++-++.+.+...++-..             ...++.++.+|+-+...  
T Consensus        37 ~~~rvLvPgCG~g---~D~~~La~~G~~VvGvDls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gDfF~l~~--  111 (218)
T PF05724_consen   37 PGGRVLVPGCGKG---YDMLWLAEQGHDVVGVDLSPTAIEQAFEENNLEPTVTSVGGFKRYQAGRITIYCGDFFELPP--  111 (218)
T ss_dssp             TSEEEEETTTTTS---CHHHHHHHTTEEEEEEES-HHHHHHHHHHCTTEEECTTCTTEEEETTSSEEEEES-TTTGGG--
T ss_pred             CCCeEEEeCCCCh---HHHHHHHHCCCeEEEEecCHHHHHHHHHHhccCCCcccccceeeecCCceEEEEcccccCCh--
Confidence            3568999999888   44788999999999999999888876544321             12357889999987542  


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCC
Q 025273           78 NLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSM  157 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~  157 (255)
                             +..|++|.++-.+.....       +++...+           -.+.+..+++++++++.++-.... .....
T Consensus       112 -------~~~g~fD~iyDr~~l~Al-------pp~~R~~-----------Ya~~l~~ll~p~g~~lLi~l~~~~-~~~~G  165 (218)
T PF05724_consen  112 -------EDVGKFDLIYDRTFLCAL-------PPEMRER-----------YAQQLASLLKPGGRGLLITLEYPQ-GEMEG  165 (218)
T ss_dssp             -------SCHHSEEEEEECSSTTTS--------GGGHHH-----------HHHHHHHCEEEEEEEEEEEEES-C-SCSSS
T ss_pred             -------hhcCCceEEEEecccccC-------CHHHHHH-----------HHHHHHHHhCCCCcEEEEEEEcCC-cCCCC
Confidence                   112478999988877552       2221111           234456778888885555433221 22236


Q ss_pred             hhhHhhHHHHHHH
Q 025273          158 AMYGVTKTALLGL  170 (255)
Q Consensus       158 ~~y~~sK~a~~~l  170 (255)
                      ++|+.+..-+..+
T Consensus       166 PPf~v~~~ev~~l  178 (218)
T PF05724_consen  166 PPFSVTEEEVREL  178 (218)
T ss_dssp             SS----HHHHHHH
T ss_pred             cCCCCCHHHHHHH
Confidence            7888888555433

Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=96.53  E-value=0.027  Score=48.04  Aligned_cols=93  Identities=12%  Similarity=0.138  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH-cC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGL-EG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~-~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .|.+|||+|+ |++|...++.+++ .| .+|+++++++++++.+++ .   +.. .  .  +      +++.+    .. 
T Consensus       163 ~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~-~---~~~-~--~--~------~~~~~----~~-  221 (341)
T cd08237         163 DRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSF-A---DET-Y--L--I------DDIPE----DL-  221 (341)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhh-c---Cce-e--e--h------hhhhh----cc-
Confidence            4789999996 9999999888876 44 579999998776655432 1   111 0  0  0      11111    11 


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .+|++|.++|...        +.               ..++..++.++++|+++.++.
T Consensus       222 g~d~viD~~G~~~--------~~---------------~~~~~~~~~l~~~G~iv~~G~  257 (341)
T cd08237         222 AVDHAFECVGGRG--------SQ---------------SAINQIIDYIRPQGTIGLMGV  257 (341)
T ss_pred             CCcEEEECCCCCc--------cH---------------HHHHHHHHhCcCCcEEEEEee
Confidence            5899999988411        01               122334567788999998874

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=96.53  E-value=0.0067  Score=52.49  Aligned_cols=39  Identities=15%  Similarity=0.116  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNV   49 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~   49 (255)
                      +.++|.|.||+|.+|+++.+.|.++ ..+|..+.++....
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG   76 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG   76 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC
Confidence            3468999999999999999999998 67888888765443

>PRK07877 hypothetical protein; Provisional

Probab=96.53  E-value=0.02  Score=53.43  Aligned_cols=80  Identities=18%  Similarity=0.192  Sum_probs=57.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCc------------------hhHHHHHHHHHhc--CCeEEEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQ------------------KNVDEAVVKLKAR--GIEVIGV   66 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~------------------~~~~~~~~~~~~~--~~~~~~~   66 (255)
                      .|++.+|+|.|+ | +|..++..|++.|.  +++++|.+.                  .+.+.+++.+.+.  ..++..+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            377899999999 4 99999999999994  699998652                  2344445555443  3467777


Q ss_pred             EecCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      ...++ ++.++++++       ..|++|.+.-
T Consensus       182 ~~~i~-~~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        182 TDGLT-EDNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             eccCC-HHHHHHHhc-------CCCEEEECCC
Confidence            77776 566666654       6788887754

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=96.50  E-value=0.024  Score=46.68  Aligned_cols=106  Identities=18%  Similarity=0.271  Sum_probs=71.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG-K   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-~   89 (255)
                      +|++++|.||+|..|+-+.+--.-.|+.|+..+-+.++..-++.++.-  ...    .|--++..+.+++++.   ++ .
T Consensus       153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~--d~a----fNYK~e~~~~~aL~r~---~P~G  223 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGF--DDA----FNYKEESDLSAALKRC---FPEG  223 (343)
T ss_pred             CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCC--ccc----eeccCccCHHHHHHHh---CCCc
Confidence            579999999999999876555555699999988887765554444311  111    1333343555555543   43 7


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ  152 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~  152 (255)
                      +|+.+-|.|..                           ++.+.+..|+..+||+.-+-++.++
T Consensus       224 IDiYfeNVGG~---------------------------~lDavl~nM~~~gri~~CG~ISqYN  259 (343)
T KOG1196|consen  224 IDIYFENVGGK---------------------------MLDAVLLNMNLHGRIAVCGMISQYN  259 (343)
T ss_pred             ceEEEeccCcH---------------------------HHHHHHHhhhhccceEeeeeehhcc
Confidence            99999999852                           4455667788888999877666554

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.48  E-value=0.17  Score=39.66  Aligned_cols=105  Identities=11%  Similarity=0.101  Sum_probs=67.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ..+++||-.|++.|.   .+..|+++|++|++++.++..++..++.....+. .+.+...|+.+..        .   -+
T Consensus        29 ~~~~~vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~~--------~---~~   94 (197)
T PRK11207         29 VKPGKTLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNLT--------F---DG   94 (197)
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhCC--------c---CC
Confidence            456789999988775   4577888899999999999887777666555432 3566666654321        0   13


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ..|+++.+.....       .+.++.           -.+++.+.+.++++|.++.+.
T Consensus        95 ~fD~I~~~~~~~~-------~~~~~~-----------~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         95 EYDFILSTVVLMF-------LEAKTI-----------PGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             CcCEEEEecchhh-------CCHHHH-----------HHHHHHHHHHcCCCcEEEEEE
Confidence            6899887644211       122221           234556677788889865544

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.48  E-value=0.012  Score=49.62  Aligned_cols=93  Identities=22%  Similarity=0.197  Sum_probs=62.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+.||++.|.|- |.||+++++.+...|.+|+..+|.....        ..  .+   .     ..+++++++      
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~--------~~--~~---~-----~~~l~ell~------  195 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNK--------NE--EY---E-----RVSLEELLK------  195 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCcccc--------cc--Cc---e-----eecHHHHhh------
Confidence            3689999999985 8999999999999999999998863210        00  01   1     124555554      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       .-|+++.+.-.....  .                   -.+.+..+..|+++..+||++=
T Consensus       196 -~sDvv~lh~Plt~~T--~-------------------~li~~~~~~~Mk~~a~lIN~aR  233 (311)
T PRK08410        196 -TSDIISIHAPLNEKT--K-------------------NLIAYKELKLLKDGAILINVGR  233 (311)
T ss_pred             -cCCEEEEeCCCCchh--h-------------------cccCHHHHHhCCCCeEEEECCC
Confidence             569988776543311  1                   1133445677888888998873

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.47  E-value=0.011  Score=43.62  Aligned_cols=40  Identities=25%  Similarity=0.295  Sum_probs=36.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      .+++||.++|.|.+.-+|+.++..|.++|++|.++.++..
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            3689999999999999999999999999999999987653

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.47  E-value=0.015  Score=48.89  Aligned_cols=77  Identities=23%  Similarity=0.331  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      .+.+++|+|+++++|.++++.+...|++|+.++++.+..+.+ +++   +...   ..|..+.+..+.+    .+..  .
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~----~~~~~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GADV---AVDYTRPDWPDQV----REALGGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCCE---EEecCCccHHHHH----HHHcCCC
Confidence            478999999999999999999999999999999887765543 222   2221   1233333322322    2222  2


Q ss_pred             CCCEEEEcCC
Q 025273           89 KIDVVVSNAA   98 (255)
Q Consensus        89 ~~d~lv~~ag   98 (255)
                      .+|.++++.|
T Consensus       211 ~~d~vl~~~g  220 (324)
T cd08244         211 GVTVVLDGVG  220 (324)
T ss_pred             CceEEEECCC
Confidence            5999999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.47  E-value=0.008  Score=43.52  Aligned_cols=87  Identities=17%  Similarity=0.114  Sum_probs=51.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHHHHhc--------CCeEEEEEecCCCHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKAR--------GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      .++-|.|+ |-+|.++++.|.+.|+.|..+. |+.+..+.....+...        -.+..++-+-+.|. .+..+++++
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~L   88 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQL   88 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHH
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHH
Confidence            46888887 8899999999999999987764 6655555554443211        12333333444433 778888887


Q ss_pred             HHH--hCCCCEEEEcCCCCC
Q 025273           84 IEK--FGKIDVVVSNAAANP  101 (255)
Q Consensus        84 ~~~--~g~~d~lv~~ag~~~  101 (255)
                      ...  +.+=.+++|+.|-..
T Consensus        89 a~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   89 AQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HCC--S-TT-EEEES-SS--
T ss_pred             HHhccCCCCcEEEECCCCCh
Confidence            654  323358999999643

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.44  E-value=0.0096  Score=47.51  Aligned_cols=42  Identities=31%  Similarity=0.437  Sum_probs=37.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK   55 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (255)
                      ++.|.||+|.+|.++++.|++.|++|++.+|+++..+.+...
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            589999999999999999999999999999998877666554

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.44  E-value=0.059  Score=46.64  Aligned_cols=119  Identities=13%  Similarity=0.086  Sum_probs=71.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC-e----EEE----EeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA-S----VVV----SSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~-~----V~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      .-+|.|+|++|.+|.+++..|+..|. .    |.+    ++++.+.++...-++...-.... ...-++. ..       
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~-~~v~i~~-~~-------  114 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLL-REVSIGI-DP-------  114 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhc-CceEEec-CC-------
Confidence            35799999999999999999998763 2    444    48888887776666654310000 0011111 01       


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       .+.+..-|++|..||....    ...+   -.+.+..|..=.-.+.+.+.++-.+.+.++++|-
T Consensus       115 -y~~~kdaDIVVitAG~prk----pg~t---R~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       115 -YEVFEDADWALLIGAKPRG----PGME---RADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             -HHHhCCCCEEEECCCCCCC----CCCC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence             1223478999999997432    1223   3345666665555555555554445667777774

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.44  E-value=0.011  Score=45.76  Aligned_cols=43  Identities=21%  Similarity=0.320  Sum_probs=35.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK   57 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   57 (255)
                      +|.|.|+ |.+|+.++..++..|++|++.+++++.++...+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            4778887 999999999999999999999999998877666554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PLN02306 hydroxypyruvate reductase

Probab=96.43  E-value=0.018  Score=49.91  Aligned_cols=39  Identities=15%  Similarity=0.067  Sum_probs=33.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHH-HcCCeEEEEeCCch
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQK   47 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~-~~G~~V~~~~r~~~   47 (255)
                      ..+.||++.|.| .|.||+++++.|. ..|.+|+..++...
T Consensus       161 ~~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~~  200 (386)
T PLN02306        161 NLLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQS  200 (386)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCCc
Confidence            358999999997 6789999999986 77999999998754

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.42  E-value=0.018  Score=46.19  Aligned_cols=74  Identities=22%  Similarity=0.350  Sum_probs=55.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHH-HHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNL-INQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~-~~~~~~~~g~~d   91 (255)
                      |+++|.|+ |-+|+.+|+.|.++|++|++++++++..+...+.    ......+.+|-++++.++++ ++       ..|
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~agi~-------~aD   68 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAGID-------DAD   68 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcCCC-------cCC
Confidence            35666665 5689999999999999999999998876663331    12567788899988887765 22       567


Q ss_pred             EEEEcCC
Q 025273           92 VVVSNAA   98 (255)
Q Consensus        92 ~lv~~ag   98 (255)
                      ++|-..|
T Consensus        69 ~vva~t~   75 (225)
T COG0569          69 AVVAATG   75 (225)
T ss_pred             EEEEeeC
Confidence            7776655

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.41  E-value=0.071  Score=44.97  Aligned_cols=114  Identities=12%  Similarity=0.069  Sum_probs=69.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++|.|+|+ |.+|.+++..|+..|.  .++++|++.+.++....++....   ....+...  .+.+           .+
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-----------~~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-----------VT   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-----------Hh
Confidence            57899996 9999999999998874  59999999887776666655431   11111111  1111           12


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      ...|++|.+||....    ...+.   ...+..|..=...+.+.+.++ .+.+.++++|..
T Consensus        70 ~~adivvitaG~~~k----~g~~R---~dll~~N~~i~~~~~~~i~~~-~p~~~vivvsNP  122 (312)
T cd05293          70 ANSKVVIVTAGARQN----EGESR---LDLVQRNVDIFKGIIPKLVKY-SPNAILLVVSNP  122 (312)
T ss_pred             CCCCEEEECCCCCCC----CCCCH---HHHHHHHHHHHHHHHHHHHHh-CCCcEEEEccCh
Confidence            378999999997542    22333   233455554444444444433 356678877753

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.41  E-value=0.003  Score=44.06  Aligned_cols=39  Identities=26%  Similarity=0.186  Sum_probs=33.2

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      ..+++||++||.|+ |.+|..-++.|++.|++|++++...
T Consensus         2 ~l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    2 FLDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             EE--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            35789999999998 8999999999999999999999886

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.40  E-value=0.037  Score=46.63  Aligned_cols=117  Identities=15%  Similarity=0.098  Sum_probs=65.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|.|+|++|.+|.+++..|+..+.  .++++|+++.  +....++........+..+.  ..++       ..+.+..-|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a--~g~a~DL~~~~~~~~i~~~~--~~~~-------~~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGA--AGVAADLSHIPTAASVKGFS--GEEG-------LENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCC--cEEEchhhcCCcCceEEEec--CCCc-------hHHHcCCCC
Confidence            478999999999999999998875  5999999862  22222222111111111000  0001       112334789


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      ++|..||....  +  ..+   -.+.+..|+.=.-.+.+.+.++ .+.+.++++|-..
T Consensus        70 ivvitaG~~~~--~--g~~---R~dll~~N~~I~~~i~~~i~~~-~p~~iiivvsNPv  119 (312)
T TIGR01772        70 VVVIPAGVPRK--P--GMT---RDDLFNVNAGIVKDLVAAVAES-CPKAMILVITNPV  119 (312)
T ss_pred             EEEEeCCCCCC--C--Ccc---HHHHHHHhHHHHHHHHHHHHHh-CCCeEEEEecCch
Confidence            99999997432  1  222   3334566665333344433333 2566777777544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=96.40  E-value=0.039  Score=47.00  Aligned_cols=103  Identities=24%  Similarity=0.261  Sum_probs=61.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   87 (255)
                      .+|.+++|+| ++++|.++++.+...|++ |+++.++++..+.+ +++   +....   .|..+... ..+.+++.+.. 
T Consensus       161 ~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~~~---g~~~v---i~~~~~~~-~~~~~~~~~~~~  231 (343)
T cd05285         161 RPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-KEL---GATHT---VNVRTEDT-PESAEKIAELLG  231 (343)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHc---CCcEE---eccccccc-hhHHHHHHHHhC
Confidence            4588999986 589999999888889998 88888886655443 222   22221   12222211 11222222222 


Q ss_pred             -CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           88 -GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        88 -g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       +++|+++++.|...                          ..+..+..++.+|+++.++-
T Consensus       232 ~~~~d~vld~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~  266 (343)
T cd05285         232 GKGPDVVIECTGAES--------------------------CIQTAIYATRPGGTVVLVGM  266 (343)
T ss_pred             CCCCCEEEECCCCHH--------------------------HHHHHHHHhhcCCEEEEEcc
Confidence             25999999977310                          12333556667789888763

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.36  E-value=0.028  Score=49.01  Aligned_cols=75  Identities=16%  Similarity=0.177  Sum_probs=52.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ..+.|+++|+|++ .+|+.+++.+.+.|+.|++++.++......   +.+     .++..|..|.+.+.+++++.     
T Consensus         9 ~~~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~ad-----~~~~~~~~d~~~l~~~~~~~-----   74 (395)
T PRK09288          9 SPSATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VAH-----RSHVIDMLDGDALRAVIERE-----   74 (395)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---hhh-----heEECCCCCHHHHHHHHHHh-----
Confidence            3455789999875 689999999999999999999876542211   110     13566788887777766542     


Q ss_pred             CCCEEEEcC
Q 025273           89 KIDVVVSNA   97 (255)
Q Consensus        89 ~~d~lv~~a   97 (255)
                      .+|.++...
T Consensus        75 ~id~vi~~~   83 (395)
T PRK09288         75 KPDYIVPEI   83 (395)
T ss_pred             CCCEEEEee
Confidence            688887543

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.35  E-value=0.028  Score=46.79  Aligned_cols=79  Identities=22%  Similarity=0.189  Sum_probs=55.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++||++.|.|.++-+|+-++..|.++|++|.++.|....++...++     ..+  +..=+.+.+.++..+       =
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~-----ADI--VIsavg~~~~v~~~~-------i  221 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQ-----ADI--VVAAVGRPRLIDADW-------L  221 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhc-----CCE--EEEecCChhcccHhh-------c
Confidence            68999999999999999999999999999999997776544433222     122  333344455444432       1


Q ss_pred             CCCEEEEcCCCCC
Q 025273           89 KIDVVVSNAAANP  101 (255)
Q Consensus        89 ~~d~lv~~ag~~~  101 (255)
                      ++..+|-..|+..
T Consensus       222 k~GaiVIDvgin~  234 (301)
T PRK14194        222 KPGAVVIDVGINR  234 (301)
T ss_pred             cCCcEEEEecccc
Confidence            5667777777653

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.35  E-value=0.22  Score=42.18  Aligned_cols=119  Identities=16%  Similarity=0.176  Sum_probs=66.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      .+.+++.|.| +|.+|..++..++..|. .|+++|++++.++.....+...    +....+..  -++.+.         
T Consensus         4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~---------   71 (321)
T PTZ00082          4 IKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED---------   71 (321)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH---------
Confidence            3457899999 58899999999999995 8999999987543222211111    11112111  022111         


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEccc
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSI  148 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~  148 (255)
                        +..-|++|.++|...... ..+.+.. ..+.+..|+.    +.+.+.+.++   +.+.++++|-.
T Consensus        72 --l~~aDiVI~tag~~~~~~-~~~~~~~-r~~~l~~n~~----i~~~i~~~i~~~~p~a~~iv~sNP  130 (321)
T PTZ00082         72 --IAGSDVVIVTAGLTKRPG-KSDKEWN-RDDLLPLNAK----IMDEVAEGIKKYCPNAFVIVITNP  130 (321)
T ss_pred             --hCCCCEEEECCCCCCCCC-CCcCCCC-HHHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCc
Confidence              237899999999754221 1111111 1333444543    3444444443   44567777643

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.34  E-value=0.0097  Score=46.86  Aligned_cols=40  Identities=20%  Similarity=0.133  Sum_probs=35.4

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      ...+++||++||.|| |.+|...++.|.+.|++|++++++.
T Consensus         4 l~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          4 LMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             eEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            345689999999998 8899999999999999999998764

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=96.33  E-value=0.034  Score=45.43  Aligned_cols=103  Identities=17%  Similarity=0.202  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++.+||=.|++.|   .++..|++.|++|++++.+++.++..++.+...+  .++.++.+|+.+...   ..      .+
T Consensus        44 ~~~~vLDiGcG~G---~~a~~la~~g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~---~~------~~  111 (255)
T PRK11036         44 RPLRVLDAGGGEG---QTAIKLAELGHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQ---HL------ET  111 (255)
T ss_pred             CCCEEEEeCCCch---HHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhh---hc------CC
Confidence            4578999988877   4678888899999999999998888777666543  467777877754321   11      13


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      ..|+++.+.....    +  .++              ..+++.+.+.++++|.++.+
T Consensus       112 ~fD~V~~~~vl~~----~--~~~--------------~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        112 PVDLILFHAVLEW----V--ADP--------------KSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             CCCEEEehhHHHh----h--CCH--------------HHHHHHHHHHcCCCeEEEEE
Confidence            6899886643211    0  011              23455667788888887654

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.33  E-value=0.032  Score=49.52  Aligned_cols=77  Identities=18%  Similarity=0.192  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +.+|+++|+|.+ ++|.++++.|+++|+.|++.+.+....  ..+++......+.+...+.. ..    .+       ..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~-~~----~~-------~~   67 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLK-DA----LD-------NG   67 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCC-HH----HH-------hC
Confidence            568999999986 899999999999999999998775531  12233321112222222211 11    11       26


Q ss_pred             CCEEEEcCCCCC
Q 025273           90 IDVVVSNAAANP  101 (255)
Q Consensus        90 ~d~lv~~ag~~~  101 (255)
                      .|.+|..+|+..
T Consensus        68 ~d~vv~spgi~~   79 (445)
T PRK04308         68 FDILALSPGISE   79 (445)
T ss_pred             CCEEEECCCCCC
Confidence            899999999853

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.31  E-value=0.03  Score=50.14  Aligned_cols=77  Identities=26%  Similarity=0.227  Sum_probs=52.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|+|+|.|+ |++|.++++.|+++|++|++++++.. ......+.+.+.+.++..  .+-..      .       .
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~--~~~~~------~-------~   76 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRL--GPGPT------L-------P   76 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEE--CCCcc------c-------c
Confidence            367899999996 77999999999999999999986643 333344555554544432  11111      0       1


Q ss_pred             CCCCEEEEcCCCCC
Q 025273           88 GKIDVVVSNAAANP  101 (255)
Q Consensus        88 g~~d~lv~~ag~~~  101 (255)
                      ...|.+|...|+..
T Consensus        77 ~~~D~Vv~s~Gi~~   90 (480)
T PRK01438         77 EDTDLVVTSPGWRP   90 (480)
T ss_pred             CCCCEEEECCCcCC
Confidence            25899999998753

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.31  E-value=0.15  Score=42.55  Aligned_cols=83  Identities=24%  Similarity=0.272  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|-+|||.|| |-||..........|+. |++++-.+++++..++ +   +.++..-..+-.+.+.+.+.++...... .
T Consensus       169 ~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~---Ga~~~~~~~~~~~~~~~~~~v~~~~g~~-~  242 (354)
T KOG0024|consen  169 KGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-F---GATVTDPSSHKSSPQELAELVEKALGKK-Q  242 (354)
T ss_pred             cCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-h---CCeEEeeccccccHHHHHHHHHhhcccc-C
Confidence            3778999986 67999988888888986 9999999988886655 4   4455443333333444444444433222 4


Q ss_pred             CCEEEEcCCC
Q 025273           90 IDVVVSNAAA   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|..|.|.|.
T Consensus       243 ~d~~~dCsG~  252 (354)
T KOG0024|consen  243 PDVTFDCSGA  252 (354)
T ss_pred             CCeEEEccCc
Confidence            9999999985

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.30  E-value=0.013  Score=48.36  Aligned_cols=38  Identities=24%  Similarity=0.331  Sum_probs=35.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      +++||+++|.|.+.-+|+-++..|..+|++|+++.++.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            68999999999999999999999999999999987753

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=96.30  E-value=0.026  Score=46.24  Aligned_cols=84  Identities=14%  Similarity=0.226  Sum_probs=65.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +|-+|+--||+|++|+++.+.....|.+-+-+-|+++..+.+++++...+..-.+     |++|--.+-+.+....++++
T Consensus       160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~Vi-----Teeel~~~~~~k~~~~~~~p  234 (354)
T KOG0025|consen  160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVI-----TEEELRDRKMKKFKGDNPRP  234 (354)
T ss_pred             CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEe-----cHHHhcchhhhhhhccCCCc
Confidence            4778999999999999999888888999888889999999999999887765543     33333333344444456789


Q ss_pred             CEEEEcCCC
Q 025273           91 DVVVSNAAA   99 (255)
Q Consensus        91 d~lv~~ag~   99 (255)
                      ..-+||.|.
T Consensus       235 rLalNcVGG  243 (354)
T KOG0025|consen  235 RLALNCVGG  243 (354)
T ss_pred             eEEEeccCc
Confidence            999999985

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=96.28  E-value=0.052  Score=46.02  Aligned_cols=99  Identities=20%  Similarity=0.276  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++.+|||+| ++++|.++++.+...|+ +|++++++++..+ ..+++   +...   ..|..+.. +.    +.....+
T Consensus       164 ~~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~-~~~~~---g~~~---vi~~~~~~-~~----~~~~~~~  230 (339)
T cd08232         164 LAGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLA-VARAM---GADE---TVNLARDP-LA----AYAADKG  230 (339)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHc---CCCE---EEcCCchh-hh----hhhccCC
Confidence            3689999977 57999999988888898 7888888766544 33332   2221   12333222 21    2212223


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .+|+++.+.|...                          ..+..++.++.+|+++.++.
T Consensus       231 ~vd~vld~~g~~~--------------------------~~~~~~~~L~~~G~~v~~g~  263 (339)
T cd08232         231 DFDVVFEASGAPA--------------------------ALASALRVVRPGGTVVQVGM  263 (339)
T ss_pred             CccEEEECCCCHH--------------------------HHHHHHHHHhcCCEEEEEec
Confidence            5999999877310                          11334566677889998864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.27  E-value=0.035  Score=42.06  Aligned_cols=85  Identities=11%  Similarity=0.094  Sum_probs=55.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-------cCCeEEEEEecCCCHHHHHHHHHH--H
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-------RGIEVIGVVCHVSNGQQRKNLINQ--T   83 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~--~   83 (255)
                      +++-+.|- |-+|+.+++.|+++|+.|++.+|++++.+.+.++-..       .-....++..=+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            45677776 7999999999999999999999998887776543100       001224445567888888888887  5


Q ss_pred             HHHhCCCCEEEEcCC
Q 025273           84 IEKFGKIDVVVSNAA   98 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag   98 (255)
                      .....+=.++|++.-
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            554444455665533

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=96.25  E-value=0.19  Score=41.29  Aligned_cols=121  Identities=15%  Similarity=0.131  Sum_probs=75.5

Q ss_pred             CCCEEEEEcC-CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTAS-TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa-~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .|.+||=.|+ +|+...++++.+...| .|+.++.+...++.+++.+...+ ..+.++..|.++..          ...+
T Consensus        71 ~g~~VLDl~ag~G~kt~~la~~~~~~g-~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~----------~~~~  139 (264)
T TIGR00446        71 PPERVLDMAAAPGGKTTQISALMKNEG-AIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVFG----------AAVP  139 (264)
T ss_pred             CcCEEEEECCCchHHHHHHHHHcCCCC-EEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHhh----------hhcc
Confidence            4677885664 5777777776654444 79999999999998888887664 35666666653211          1124


Q ss_pred             CCCEEEEcCCCCCCCCCcc-------CCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           89 KIDVVVSNAAANPSVDSIL-------QTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~-------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .+|.++.++-.+.. +.+.       ..+.+.+.+    -..-...+++.+.+.++++|++|+.+.
T Consensus       140 ~fD~Vl~D~Pcsg~-G~~~~~p~~~~~~~~~~~~~----l~~~q~~iL~~a~~~lkpgG~lvYstc  200 (264)
T TIGR00446       140 KFDAILLDAPCSGE-GVIRKDPSRKKNWSEEDIQE----ISALQKELIDSAFDALKPGGVLVYSTC  200 (264)
T ss_pred             CCCEEEEcCCCCCC-cccccChhhhhcCCHHHHHH----HHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence            68999987755431 1111       122332222    222334577778888889999987653

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.24  E-value=0.018  Score=51.14  Aligned_cols=78  Identities=15%  Similarity=0.140  Sum_probs=58.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +..++++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.++    ...+.++..|.++.+.++++-      ..+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~------~~~  297 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEG------IDE  297 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcC------Ccc
Confidence            45688999998 9999999999999999999999998766655443    234567788999887765531      136


Q ss_pred             CCEEEEcCC
Q 025273           90 IDVVVSNAA   98 (255)
Q Consensus        90 ~d~lv~~ag   98 (255)
                      .|.+|.+..
T Consensus       298 a~~vi~~~~  306 (453)
T PRK09496        298 ADAFIALTN  306 (453)
T ss_pred             CCEEEECCC
Confidence            777775433

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.24  E-value=0.086  Score=44.85  Aligned_cols=40  Identities=15%  Similarity=0.146  Sum_probs=35.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~   48 (255)
                      ..++|+++.|.|. |.||+++++.|...|++|++.+|+...
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            4589999999975 679999999999999999999998654

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=96.21  E-value=0.047  Score=45.53  Aligned_cols=102  Identities=18%  Similarity=0.172  Sum_probs=61.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++.+++|+| ++++|.++++.+...|++ |++++++++..+ ..+++   +... ++  + .+..+..+.+.+... ...
T Consensus       129 ~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~-~~~~~---g~~~-~~--~-~~~~~~~~~l~~~~~-~~~  198 (312)
T cd08269         129 AGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLA-LAREL---GATE-VV--T-DDSEAIVERVRELTG-GAG  198 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHh---CCce-Ee--c-CCCcCHHHHHHHHcC-CCC
Confidence            578899996 689999999998899999 998888866544 22222   2211 11  1 112222222222211 125


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      +|.++++.|...                          ........++.+|+++.++..
T Consensus       199 vd~vld~~g~~~--------------------------~~~~~~~~l~~~g~~~~~g~~  231 (312)
T cd08269         199 ADVVIEAVGHQW--------------------------PLDLAGELVAERGRLVIFGYH  231 (312)
T ss_pred             CCEEEECCCCHH--------------------------HHHHHHHHhccCCEEEEEccC
Confidence            999999876311                          122234566678899988754

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PRK14851 hypothetical protein; Provisional

Probab=96.21  E-value=0.048  Score=50.79  Aligned_cols=81  Identities=11%  Similarity=0.129  Sum_probs=56.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc-------------------hhHHHHHHHHHhc--CCeEEEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ-------------------KNVDEAVVKLKAR--GIEVIGV   66 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~   66 (255)
                      .|++.+|+|.| .||+|..+++.|++.|.. ++++|.+.                   .+.+.+++.+.+.  ..++..+
T Consensus        40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            47789999998 679999999999999975 88887542                   2334444445443  3466777


Q ss_pred             EecCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      ...++ .+.+.++++       .+|++|.+.-
T Consensus       119 ~~~i~-~~n~~~~l~-------~~DvVid~~D  142 (679)
T PRK14851        119 PAGIN-ADNMDAFLD-------GVDVVLDGLD  142 (679)
T ss_pred             ecCCC-hHHHHHHHh-------CCCEEEECCC
Confidence            77775 445555554       6788886543

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=96.21  E-value=0.025  Score=47.49  Aligned_cols=89  Identities=16%  Similarity=0.132  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++++++|+| .|++|...++.+...|++ |++++++.++++...+        ..  ..|-.+.            .-..
T Consensus       144 ~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~--------~~--~i~~~~~------------~~~g  200 (308)
T TIGR01202       144 KVLPDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG--------YE--VLDPEKD------------PRRD  200 (308)
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh--------cc--ccChhhc------------cCCC
Confidence            577899997 589999999888888998 5556666554332211        01  1121110            1136


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      +|++|.+.|...                          ..+.+++.++++|+++.++..
T Consensus       201 ~Dvvid~~G~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  233 (308)
T TIGR01202       201 YRAIYDASGDPS--------------------------LIDTLVRRLAKGGEIVLAGFY  233 (308)
T ss_pred             CCEEEECCCCHH--------------------------HHHHHHHhhhcCcEEEEEeec
Confidence            899999988411                          123445667889999988753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	255
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		9e-45
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		2e-42
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-18
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		5e-18
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		3e-17
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		4e-17
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		6e-17
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-16
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		6e-16
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		6e-16
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-15
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		5e-15
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		8e-15
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		5e-14
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		8e-14
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-13
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		2e-13
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		2e-13
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-13
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-13
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-13
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-12
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-12
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		3e-12
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		3e-12
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		1e-11
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-11
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-11
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		4e-11
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		5e-11
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		5e-11
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		6e-11
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		1e-10
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		1e-10
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		1e-10
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		1e-10
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		1e-10
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		1e-10
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		2e-10
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-10
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-10
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		2e-10
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		2e-10
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-10
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		3e-10
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		4e-10
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-10
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		8e-10
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		8e-10
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		9e-10
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		1e-09
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		1e-09
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		1e-09
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		1e-09
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		1e-09
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-09
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-09
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		2e-09
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		2e-09
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-09
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		3e-09
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-09
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		3e-09
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		4e-09
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-09
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-09
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		4e-09
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-09
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-09
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		5e-09
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-09
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		6e-09
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		7e-09
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		9e-09
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		9e-09
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		1e-08
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		1e-08
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		1e-08
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-08
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-08
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-08
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-08
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		2e-08
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		3e-08
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		3e-08
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-08
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-07
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-07
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		1e-07
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-07
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-07
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-07
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		2e-07
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		2e-07
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-07
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		2e-07
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		3e-07
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		3e-07
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		4e-07
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		5e-07
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		5e-07
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		7e-07
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		8e-07
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		9e-07
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		1e-06
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		1e-06
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		1e-06
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-06
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		1e-06
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-06
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		2e-06
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		3e-06
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		3e-06
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		3e-06
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-06
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		4e-06
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		6e-06
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		6e-06
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		6e-06
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		7e-06
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		7e-06
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-05
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		1e-05
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		1e-05
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		2e-05
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		2e-05
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-05
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		3e-05
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		3e-05
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-05
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		4e-05
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		4e-05
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		5e-05
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		8e-05
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		1e-04
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-04
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		1e-04
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		1e-04
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		2e-04
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		2e-04
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		2e-04
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		2e-04
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		2e-04
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		3e-04
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		3e-04
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		3e-04
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		5e-04
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		6e-04

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score =  176 bits (447), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 136/260 (52%), Gaps = 5/260 (1%)
Query: 1   MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
           M    M +R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD+AV  L+ 
Sbjct: 2   MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 61
Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
            G+ V G VCHV   + R+ L+   ++  G I               I+   E V DK  
Sbjct: 62  EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 121
Query: 119 DINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
           DINVK+  L+ +   P ++K  G SVV++SSIA + P    + Y V              
Sbjct: 122 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 181
Query: 177 EMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXX 235
           E+AP + RVNC+APG + T F+  +  +    +++++   + RLG   D           
Sbjct: 182 ELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSE 241
Query: 236 XXXYITGETLVVAGGMPSRL 255
              YITGET+VV GG PSRL
Sbjct: 242 DASYITGETVVVGGGTPSRL 261

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 134/251 (53%), Gaps = 3/251 (1%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           K  + KVA+VTAST GIG  IA RL  +GA VVVSSRKQ+NVD  V  L+  G+ V G V
Sbjct: 10  KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
           CHV   + R+ L+   +   G +               I+   E V DK+  +NVK+++L
Sbjct: 70  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 129
Query: 128 LLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRV 184
           + +   P ++K  G SV+++SS+  Y P  ++  Y V              E+AP + RV
Sbjct: 130 MTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRV 189
Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGET 244
           NC+APG + T+F++ +  +   ++ ++++  + RLG   D              YITGET
Sbjct: 190 NCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGET 249
Query: 245 LVVAGGMPSRL 255
           +VV GG  SRL
Sbjct: 250 VVVGGGTASRL 260

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 114/255 (44%), Gaps = 10/255 (3%)
Query: 6   MAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           MA R+  +G  A+VT  ++GIG+GI E L   GASV   SR QK +++ + + +++G +V
Sbjct: 1   MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV 60
Query: 64  IGVVCHVSNGQQRKNLINQTIEKF-GKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINV 122
              VC +S+  +R+ L+N     F GK+                  T E     +  IN 
Sbjct: 61  EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED-YSLIMSINF 119
Query: 123 KSSILLLQDAAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 180
           +++  L   A P L+     +VV ISS++G       A+YG               E A 
Sbjct: 120 EAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAK 179
Query: 181 DT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQ---NTLLNRLGTTRDMXXXXXXXXXXX 236
           D  RVN V PG + T   E    +   ++ + +      L R+G  +++           
Sbjct: 180 DNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA 239
Query: 237 XXYITGETLVVAGGM 251
             Y+TG+ + V GG+
Sbjct: 240 ASYVTGQIIYVDGGL 254

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 8/249 (3%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +G  A+VT  ++GIG+GI E L   GASV   SR QK +++ + + +++G +V   VC 
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65
Query: 70  VSNGQQRKNLINQTIEKF-GKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
           +S+  +R+ L+N     F GK+                  T E     +  IN +++  L
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED-YSLIMSINFEAAYHL 124
Query: 129 LQDAAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-RVN 185
              A P L+     +VV ISS++G       A+YG               E A D  RVN
Sbjct: 125 SVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVN 184
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQ---NTLLNRLGTTRDMXXXXXXXXXXXXXYITG 242
            V PG + T   E    +   ++ + +      L R+G  +++             Y+TG
Sbjct: 185 GVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTG 244
Query: 243 ETLVVAGGM 251
           + + V GG+
Sbjct: 245 QIIYVDGGL 253

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 7/243 (2%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV-KLKARGIEVIGVVCHVS 71
           K A+VT +++GIG  IA +L  EG +V V+    K   EAVV ++KA+G++   +  +V+
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 70
Query: 72  NGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQD 131
           +  + K +I + + +FG +               +++ KE   D + D N+K     +Q 
Sbjct: 71  DADEVKAMIKEVVSQFGSL-DVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQK 129
Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
           A P +  Q+  +++ +SS+ G       A Y                E+A     VN VA
Sbjct: 130 ATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVA 189
Query: 189 PGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLVVA 248
           PGF+ +   + ++  D +++ +     L R G   D+             YITG+T+ V 
Sbjct: 190 PGFIVSDMTDALS--DELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVN 247
Query: 249 GGM 251
           GGM
Sbjct: 248 GGM 250

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 6/240 (2%)
Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
           VAIVT +  GIG  IA      GASVVV+  K +  +     ++  G + IG+ C+V++ 
Sbjct: 14  VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDE 73
Query: 74  QQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDAA 133
           Q R+ +I   +++FGKI                     S  +  + +N+ S   L Q AA
Sbjct: 74  QHREAVIKAALDQFGKITVLVNNAGGGGPKP--FDMPMSDFEWAFKLNLFSLFRLSQLAA 131
Query: 134 PHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPG 190
           PH+QK  G +++ ISS+AG      MA YG               ++ P   RVN +APG
Sbjct: 132 PHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPG 191
Query: 191 FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLVVAGG 250
            + T     + + + + + + ++T L RLG  +D+             +I+G+ L V+GG
Sbjct: 192 AIKTDALATVLTPE-IERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGG 250

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 115/246 (46%), Gaps = 7/246 (2%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVC 68
            +GKVA+VT +++GIG  IA  L  +GA+VVV+ +  ++  +E V ++K  G + I V  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
            V+N +   N++ QT++ FG++               +++ KE   D + + N+K   L 
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQV-DILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLC 120
Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
            +  +  +  Q+   +V I+S+ G       A Y                E+A  +  VN
Sbjct: 121 TKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVN 180
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            +APGF+ T   + +  N  ++  + +     + G  +D+             YITG+TL
Sbjct: 181 AIAPGFIATDMTDVLDEN--IKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTL 238
Query: 246 VVAGGM 251
            V GGM
Sbjct: 239 NVDGGM 244

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 7/247 (2%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVV 67
           + +GK AIVT S++G+G  IA +LG  GA++V++ S    ++D    + KA GI V+   
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             V N +  +N++   ++ FG+I               +L+  E   D + + N+KS+ L
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRI-DILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYL 120
Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
             +  +  +  QK   ++ I+SIAG    +  A Y                E A      
Sbjct: 121 CTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYC 180
Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGET 244
           N VAPG + T   + +   D V++    N  L R GT  ++             YITG+ 
Sbjct: 181 NAVAPGIIKTDMTDVLP--DKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQV 238
Query: 245 LVVAGGM 251
           + + GG+
Sbjct: 239 INIDGGL 245

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 17/254 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +G  A+VT  ++GIG+ I E L   GA V   SR +K +DE +   + +G+ V G VC 
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 70  VSNGQQRKNLINQTIEKF-GKIXXXXXXXXXXXXXXXILQTKESVLDKLWDI----NVKS 124
           + +  +R  L+      F GK+               I +  +   +K ++I    N ++
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKL-----NILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEA 133
Query: 125 SILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT 182
           +  L Q A P L+  +  +V+ +SSIAG+    S+++Y                E A D 
Sbjct: 134 AYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDN 193
Query: 183 -RVNCVAPGFVPTHFAE-YITSNDGVRQTIEQ---NTLLNRLGTTRDMXXXXXXXXXXXX 237
            RVN VAPG + T   E  I  N   ++ I+     T + R G  +++            
Sbjct: 194 IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAA 253
Query: 238 XYITGETLVVAGGM 251
            YITG+ +   GG 
Sbjct: 254 SYITGQIIWADGGF 267

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 12/256 (4%)
Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIE 62
           MK     +G+VA+VT  ++G+GFGIA+ L   G SVVV+SR  +   EA  KL  + G+E
Sbjct: 13  MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE 72
Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW---D 119
            +   C VSN ++ K L+    EKFGK+                   +E  LD+     +
Sbjct: 73  TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH----PAEEFPLDEFRQVIE 128
Query: 120 INVKSSILLLQDAAPHLQKGS--SVVLISSIAGYQ-PQSSMAMYGVXXXXXXXXXXXXXX 176
           +N+  +  + ++A   L++    S++ I S+   +    +++ Y                
Sbjct: 129 VNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAK 188
Query: 177 EMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXX 235
           E      RVN +APG+  T   E + S+      + +   L R G   D+          
Sbjct: 189 EWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASE 248
Query: 236 XXXYITGETLVVAGGM 251
              Y+TG+ + V GG 
Sbjct: 249 EAKYVTGQIIFVDGGW 264

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 3/246 (1%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGV 66
           +RF  +  +V  + + IG   A R   EGA+VV++ +   +    AV +++  G   + +
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63
Query: 67  VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
              ++N  + +  I+   +KFG+I               I +  E+   ++ D+N+ S  
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123
Query: 127 LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM-YGVXXXXXXXXXXXXXXEMAPDTRVN 185
           L  + A P + KG ++V  SS AG       A+ Y                E+ P  RVN
Sbjct: 124 LTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPKIRVN 183
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            V PG + T F +  T  + VR+ +   T L R G++ D+             Y+TG   
Sbjct: 184 AVCPGMISTTFHDTFTKPE-VRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACY 242
Query: 246 VVAGGM 251
            + GG+
Sbjct: 243 DINGGV 248

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 103/246 (41%), Gaps = 6/246 (2%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            + K  +VT  T+GIG  I E     GA +   +R +  ++E + K + +G +V G VC 
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71
Query: 70  VSNGQQRKNLINQTIEKF-GKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
            S   +R+ L+      F GK+               +  T E     +   N++S+  L
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHI-STNLESAYHL 130
Query: 129 LQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRVN 185
            Q A P L+     +++ +SSIAG    S  ++Y                E A D  R N
Sbjct: 131 SQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRAN 190
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            VAP  + T  AE +  +D  ++ +     L R G   ++             YITG+T+
Sbjct: 191 AVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTI 249
Query: 246 VVAGGM 251
            V GG+
Sbjct: 250 CVDGGL 255

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 7/242 (2%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV-KLKARGIEVIGVVCHVS 71
           K A+VT +++GIG  IA +L  EG +V V+    K   EAVV ++KA+G++   +  +V+
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 72  NGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQD 131
           +  + K  I + + +FG +               + + KE   D + D N+K     +Q 
Sbjct: 65  DADEVKAXIKEVVSQFGSL-DVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQK 123
Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
           A P    Q+  +++ +SS+ G       A Y                E+A     VN VA
Sbjct: 124 ATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVA 183
Query: 189 PGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLVVA 248
           PGF+ +   + ++  D +++       L R G   D+             YITG+T+ V 
Sbjct: 184 PGFIVSDXTDALS--DELKEQXLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVN 241
Query: 249 GG 250
           GG
Sbjct: 242 GG 243

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 27/260 (10%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---SSRKQKNVDEAVVK---LKAR 59
           M  + QGKV++VT ST+GIG  IAE+L   G++V++   S  + K V E +     +KA 
Sbjct: 1   MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAH 60
Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEK-FGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
           G+E + ++   S        IN+  E+ +  +                L  + S+LD  W
Sbjct: 61  GVE-MNLLSEES--------INKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLD--W 109
Query: 119 D----INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXX 172
           +    +N+  + L+ Q++   +  Q+   +V ISS+ G+        Y            
Sbjct: 110 EEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTK 169
Query: 173 XXXXEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXX 231
               E+AP +  VN VAPGF+ T     ++  + ++Q  ++   L R G+  ++      
Sbjct: 170 SLAKELAPRNVLVNAVAPGFIETDMTAVLS--EEIKQKYKEQIPLGRFGSPEEVANVVLF 227
Query: 232 XXXXXXXYITGETLVVAGGM 251
                  YITGE + V GGM
Sbjct: 228 LCSELASYITGEVIHVNGGM 247

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 112/262 (42%), Gaps = 17/262 (6%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M+K+F GKV +VT +   IG   A RL  EG ++ +    ++ +++A   ++ +G+E   
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS 60
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
            VC V++ +     ++  +  FGKI               +         ++  INV  +
Sbjct: 61  YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGA 120
Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DT 182
             +L+  +  +  Q    +V  +S+AG +   +MA YG               ++AP + 
Sbjct: 121 FHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNI 180
Query: 183 RVNCVAPGFVPTHF-------------AEYITSNDG-VRQTIEQNTLLNRLGTTRDMXXX 228
           RVN ++PG++   F             ++Y +++   V Q +  +  + R G   ++   
Sbjct: 181 RVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGV 240
Query: 229 XXXXXXXXXXYITGETLVVAGG 250
                     ++TG  L +AGG
Sbjct: 241 VAFLLGDDSSFMTGVNLPIAGG 262

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 8/250 (3%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M K    +VAIVT +++GIG  IA  L   GA V+ ++  +   +      K  G+E  G
Sbjct: 22  MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRG 81
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
            V +V++      L+  T+++FG +                ++ K+   D + D N+K +
Sbjct: 82  AVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLA-MRMKDDEWDAVIDTNLK-A 139
Query: 126 ILLLQDAA--PHLQ-KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-D 181
           +  L  A   P ++ +G  +V I+S+ G         Y                E+    
Sbjct: 140 VFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRG 199
Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYIT 241
             VNCVAPGF+ T   + +      +  ++    L RLG+  D+             YIT
Sbjct: 200 ITVNCVAPGFIDTDMTKGLPQEQ--QTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYIT 257
Query: 242 GETLVVAGGM 251
           G TL V GGM
Sbjct: 258 GTTLHVNGGM 267

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 5/244 (2%)
Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCH 69
           Q K A+VT S++G+G   A RL   G ++V++ +R +K   E   +++  G++V+ V  +
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKAN 62
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V    + K +  Q  E FG++               +++ +E+  D   +IN K+ +   
Sbjct: 63  VGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRP-VMELEETHWDWTMNINAKALLFCA 121
Query: 130 QDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           Q+AA  ++K  G  +V ISS+   +   +    GV              E++P    VN 
Sbjct: 122 QEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNA 181
Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLV 246
           V+ G + T   ++  + + + +   QNT   R+   +DM              I G+T++
Sbjct: 182 VSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTII 241
Query: 247 VAGG 250
           V GG
Sbjct: 242 VDGG 245

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 10/249 (4%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           +R   K+A++T +T GIG   A+R   EGA V ++ R++  +D A+ ++   G   +G+ 
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQ 81
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
              +N  +   L  +   + G+I               + +  E   D  +D NVK  + 
Sbjct: 82  ADSANLAELDRLYEKVKAEAGRI-DVLFVNAGGGSXLPLGEVTEEQYDDTFDRNVKGVLF 140
Query: 128 LLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
            +Q A P L +GSSVVL  S AG     + ++Y                ++     R+N 
Sbjct: 141 TVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINT 200
Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTL-----LNRLGTTRDMXXXXXXXXXXXXXYIT 241
           ++PG   T     +   D V+Q    N L       R+G   ++             ++T
Sbjct: 201 LSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAALFLASDDSSFVT 260
Query: 242 GETLVVAGG 250
           G  L V GG
Sbjct: 261 GAELFVDGG 269

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 104/258 (40%), Gaps = 20/258 (7%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVC 68
            QG+  +VT  T+GIG GIA      GA+V V+ R   ++D  V  L   G  +VIGV  
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
            VS+  Q   L  + +E+FG I                  T E  L+ ++ +NV  +   
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQ-LNGIFAVNVNGTFYA 126
Query: 129 LQDAAPHLQKGSS--VVLISSIAG-YQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
           +Q     L    S  VVL SSI G        + YG               E+AP    V
Sbjct: 127 VQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITV 186
Query: 185 NCVAPGFVPT-----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXY 239
           N + PG + T     +  EYI S       + ++     LGT  D+             Y
Sbjct: 187 NAIMPGNIMTEGLLENGEEYIAS-------MARSIPAGALGTPEDIGHLAAFLATKEAGY 239
Query: 240 ITGETLVVAGG--MPSRL 255
           ITG+ + V GG  +P  L
Sbjct: 240 ITGQAIAVDGGQVLPESL 257

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 109/248 (43%), Gaps = 19/248 (7%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVC 68
             GK +++T ++ GIG  IA  L   G+ V++S   ++ +      LK    IE    VC
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE----VC 67
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
           +++N ++  NLI++T                       ++ K+   DK+ DIN+K++ +L
Sbjct: 68  NLANKEECSNLISKTSN-----LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFIL 122
Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTR--- 183
            ++A   +  ++   ++ ISSI G       A Y                E+A  TR   
Sbjct: 123 NREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVA--TRGIT 180
Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGE 243
           VN VAPGF+ +   + +  N+  R+ I Q   L   G   D+             YITG+
Sbjct: 181 VNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQ 238
Query: 244 TLVVAGGM 251
           TL V GGM
Sbjct: 239 TLHVNGGM 246

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 15/255 (5%)
Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCH 69
            GKVA++T S+ GIG  IAE    EGA +V+ +R+   + EA   LK + G+ V+ V   
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVD 65
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+  +    ++      FG                 I++  +      W+++V +++ L 
Sbjct: 66  VATPEGVDAVVESVRSSFGG-ADILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRLA 124
Query: 130 QDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
           +   P ++   G +++  +SI   QP     +Y V              E+  D  RVNC
Sbjct: 125 RGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNC 184
Query: 187 VAPGFVPT----HFAEYITSNDG------VRQTIEQNTLLNRLGTTRDMXXXXXXXXXXX 236
           + PG + T      A+ +T ++G      ++   +++  + R  +  ++           
Sbjct: 185 INPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSER 244
Query: 237 XXYITGETLVVAGGM 251
             Y  G    V GGM
Sbjct: 245 ATYSVGSAYFVDGGM 259

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           KVAIVT +++GIG  IA RL  +G +VV++ + K    +E   K++A G + +     VS
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS 87
Query: 72  NGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQD 131
           +    + L     E FG +               I +T ++V D++  +N+K +   L++
Sbjct: 88  DPAAVRRLFATAEEAFGGV-DVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLRE 146
Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEM-APDTRVNCVAPG 190
           AA  L+ G  ++  S+        S  +Y                E+   D  VN VAPG
Sbjct: 147 AAQRLRVGGRIINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSKELRGRDITVNAVAPG 206
Query: 191 FVPTHFAEYITS-NDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLVVAG 249
             PT    ++   +D VR    +   L RLGT +D+             ++ G+ L   G
Sbjct: 207 --PTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANG 264
Query: 250 GM 251
           G+
Sbjct: 265 GI 266

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 15/255 (5%)
Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCH 69
            GKVA++T S+ GIG  IAE    EGA +V+ +R+   + EA   LK + G+ V+ V   
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVD 65
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+  +    ++      FG                 I++  +      W++ V +++ L 
Sbjct: 66  VATPEGVDAVVESVRSSFGG-ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124
Query: 130 QDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
           +   P ++   G +++  +SI   QP     +Y V              E+  D  RVNC
Sbjct: 125 RGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNC 184
Query: 187 VAPGFVPT----HFAEYITSNDG------VRQTIEQNTLLNRLGTTRDMXXXXXXXXXXX 236
           + PG + T      A+ +T ++G      ++   +++  + R  +  ++           
Sbjct: 185 INPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSER 244
Query: 237 XXYITGETLVVAGGM 251
             Y  G    V GGM
Sbjct: 245 ATYSVGSAYFVDGGM 259

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 6/245 (2%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GK AI+T +  GIG  IA      GASVVVS       +  V +++  G +     C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
            +++ Q+   L +  I K GK+                +   +    + +++NV S   L
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMAD--FRRAYELNVFSFFHL 125
Query: 129 LQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
            Q  AP ++K  G  ++ I+S+A      +M  Y                ++   + RVN
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVN 185
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            +APG + T   + + + + + Q + Q+T + RLG  +D+             +++G+ L
Sbjct: 186 GIAPGAILTDALKSVITPE-IEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQIL 244
Query: 246 VVAGG 250
            V+GG
Sbjct: 245 TVSGG 249

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           +  G+VA++T    G+G  + +R   EGA V V  +  + + E  V   A G   +GVV 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEV---AHGGNAVGVVG 58
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWD----INVKS 124
            V + Q +K    + +  FGKI               +    E  +D  +D    +NVK 
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118
Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT 182
            I  ++   P L   +GS V  IS+ AG+ P     +Y                E+AP  
Sbjct: 119 YIHAVKACLPALVSSRGSVVFTISN-AGFYPNGGGPLYTATKHAVVGLVRQMAFELAPHV 177
Query: 183 RVNCVAPG 190
           RVN VAPG
Sbjct: 178 RVNGVAPG 185

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 101/256 (39%), Gaps = 13/256 (5%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVI 64
           M    +GK  ++T S+QGIG   A      GA V +  RK   N+DE +  ++A G +  
Sbjct: 1   MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAA 60
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKS 124
                ++  +  + L+++ + KFG I               + +  ++  D + D N++S
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRS 120
Query: 125 SILLLQDAAPHLQKG-------SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXE 177
            ++  + A PHL          S+V+   SIAG+      A                  +
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVD 180
Query: 178 M--APDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXX 235
                  R N V+PG V T F    T +  VR  I     + R GT  +M          
Sbjct: 181 FHTKDGVRFNIVSPGTVDTAFHADKTQD--VRDRISNGIPMGRFGTAEEMAPAFLFFASH 238
Query: 236 XXX-YITGETLVVAGG 250
               YITG+ L + GG
Sbjct: 239 LASGYITGQVLDINGG 254

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 13/199 (6%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---VIG 65
           RF  KVAI+T S+ GIG   A     EGA V ++ R  + ++E   ++ A G+    V  
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62
Query: 66  VVCHVSNGQQRKNLINQTIEKFGK----IXXXXXXXXXXXXXXXILQTKESVLDKLWDIN 121
           VV  V+    +  +++ T+ KFGK    +                 Q+ ES  D   ++N
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIES-YDATLNLN 121
Query: 122 VKSSILLLQDAAPHLQ--KGSSVVLISSIA-GYQPQSSMAMYGVXXXXXXXXXXXXXXEM 178
           ++S I L + A PHL   KG  +V ISSIA G         Y +              ++
Sbjct: 122 LRSVIALTKKAVPHLSSTKG-EIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDL 180
Query: 179 APD-TRVNCVAPGFVPTHF 196
                RVN ++PG V T F
Sbjct: 181 IQHGIRVNSISPGLVATGF 199

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 6/244 (2%)
Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           + KVA+VT + +GIG  IA+ L    + V+  SR QK+ D  V ++K+ G E  G    V
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV 102
Query: 71  SNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQ 130
           S  ++   +IN+ + +   +                L+ K    + +   N+ S   + Q
Sbjct: 103 SKKEEISEVINKILTEHKNV-DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 161
Query: 131 DAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCV 187
             +  +   +   ++ ISSI G       A Y                E+A  +  VN +
Sbjct: 162 PISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAI 221
Query: 188 APGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLVV 247
           APGF+ +   + I+  + +++ I  N    R+GT  ++             YI G   V+
Sbjct: 222 APGFISSDMTDKIS--EQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVI 279
Query: 248 AGGM 251
            GG+
Sbjct: 280 DGGL 283

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 11/246 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F+GK+A+VT +++GIG  IAE L   GA V+ ++  +         L A G    G++ +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG---KGLMLN 59
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V++    ++++ +   +FG++               +++ K+   + + + N+ SS+  L
Sbjct: 60  VTDPASIESVLEKIRAEFGEV-DILVNNAGITRDNLLMRMKDEEWNDIIETNL-SSVFRL 117
Query: 130 QDA---APHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A   A   ++   ++ I S+ G       A Y                E+A     VN
Sbjct: 118 SKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVN 177
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            VAPGF+ T     ++  D  R  I       RLG  +++             YITGETL
Sbjct: 178 VVAPGFIETDMTRALS--DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL 235
Query: 246 VVAGGM 251
            V GGM
Sbjct: 236 HVNGGM 241

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 7/248 (2%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEV--IGV 66
            +GKVA+VT +++GIG  IA+RL  +GA V +    +++  +E V ++++ G     IG 
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 67  VCHVSNGQQ--RKNLINQTIEKFGKIXXXXXXXXXXXXXXXIL-QTKESVLDKLWDINVK 123
                +G +    +L N+   + G                  + +T E   D+   +N K
Sbjct: 65  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRXVSVNAK 124
Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEM-APDT 182
           +   ++Q A   L+  S ++ ISS A          Y                ++ A   
Sbjct: 125 APFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLGARGI 184
Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITG 242
            VN + PGFV T     + S+   +Q     +  NRLG   D+             ++TG
Sbjct: 185 TVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTG 244
Query: 243 ETLVVAGG 250
           + + V+GG
Sbjct: 245 QLIDVSGG 252

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 102/247 (41%), Gaps = 9/247 (3%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           RF+ KV IVT S  GIG   AE L  EGA+VVV+    +  +    ++ A G   I V  
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXX--XXXXXXXILQTKESVLDKLWDINVKSSI 126
            VS+ +  K + ++T+ +FG I                 +L        K   +N+  ++
Sbjct: 66  DVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGAL 125
Query: 127 LLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
              +     + K  G ++V  SS A +   +    YG+              E+   + R
Sbjct: 126 WCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLSRELGGRNIR 182
Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGE 243
           +N +APG + T  A   T+   +   I +   L+R+GT  D+             +ITG+
Sbjct: 183 INAIAPGPIDTE-ANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQ 241
Query: 244 TLVVAGG 250
              V GG
Sbjct: 242 IFNVDGG 248

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 9/209 (4%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA---VVKLKARGIEVIG 65
           RF  K  I+T S+ GIG   A     EGA+V ++ R  + ++E    ++K      +V  
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDINV 122
           VV  V+    +  +IN T+++FGKI                    +  +D   K   +N+
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 180
           ++ I + +   PHL   KG  V + S +AG Q Q     Y +              ++A 
Sbjct: 123 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 182
Query: 181 -DTRVNCVAPGFVPTHFAEYITSNDGVRQ 208
              RVN V+PG V T F   +   D   Q
Sbjct: 183 FGIRVNSVSPGMVETGFTNAMGMPDQASQ 211

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 11/246 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F+GK+A+VT +++GIG  IAE L   GA V+ ++  +         L A G    G++ +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG---KGLMLN 59
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V++    ++++ +   +FG++               +++ K+   + + + N+ SS+  L
Sbjct: 60  VTDPASIESVLEKIRAEFGEV-DILVNNAGITRDNLLMRMKDEEWNDIIETNL-SSVFRL 117
Query: 130 QDA---APHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A   A   ++   ++ I S+ G       A +                E+A     VN
Sbjct: 118 SKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVN 177
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            VAPGF+ T     ++  D  R  I       RLG  +++             YITGETL
Sbjct: 178 VVAPGFIETDMTRALS--DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL 235
Query: 246 VVAGGM 251
            V GGM
Sbjct: 236 HVNGGM 241

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 3/216 (1%)
Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           K      G+VA+VT +++GIG  IA +LG  GA VV+++R  + +     ++ A G E  
Sbjct: 22  KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAE 81
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKS 124
              C +S+           +   G+                +   K +  D L  +N+K+
Sbjct: 82  SHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKA 141
Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEM-APD 181
             LLL+  AP +   K   ++ ISS+AG  P +  A Y                E+    
Sbjct: 142 PYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQ 201
Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLN 217
            RV+ VAPG V T F   +++       IE + + +
Sbjct: 202 VRVSLVAPGSVRTEFGVGLSAKKSALGAIEPDDIAD 237

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 6/251 (2%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVI 64
           M K  +GKV ++T S+ G+G  +A R   E A VVV+ R K+   +  + ++K  G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKS 124
            V   V+      NL+   I++FGK+                 +   S  +K+ D N+  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSS-HEMSLSDWNKVIDTNLTG 119
Query: 125 SILLLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           + L  ++A  +  +     +V+ +SS+    P      Y                E AP 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179
Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYI 240
             RVN + PG + T       ++   R  +E    +  +G   ++             Y+
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYV 239
Query: 241 TGETLVVAGGM 251
           TG TL   GGM
Sbjct: 240 TGITLFADGGM 250

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 6/251 (2%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVI 64
           M K  +GKV ++T S+ G+G  +A R   E A VVV+ R K+   +  + ++K  G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKS 124
            V   V+      NL+   I++FGK+                 +   S  +K+ D N+  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNLTG 119
Query: 125 SILLLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           + L  ++A  +  +     +V+ +SS+    P      Y                E AP 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPK 179
Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYI 240
             RVN + PG + T       ++   R  +E    +  +G   ++             Y+
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYV 239
Query: 241 TGETLVVAGGM 251
           TG TL   GGM
Sbjct: 240 TGITLFADGGM 250

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 6/251 (2%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVI 64
           M K  +GKV ++T S+ G+G  +A R   E A VVV+ R K+   +  + ++K  G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKS 124
            V   V+      NL+   I++FGK+                 +   S  +K+ D N+  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNLTG 119
Query: 125 SILLLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           + L  ++A  +  +     +V+ +SS+    P      Y                E AP 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179
Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYI 240
             RVN + PG + T       ++   R  +E    +  +G   ++             Y+
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYV 239
Query: 241 TGETLVVAGGM 251
           TG TL   GGM
Sbjct: 240 TGITLFADGGM 250

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 6/251 (2%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVI 64
           M K  +GKV ++T S+ G+G  +A R   E A VVV+ R K+   +  + ++K  G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKS 124
            V   V+      NL+   I++FGK+                 +   S  +K+ D N+  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKVIDTNLTG 119
Query: 125 SILLLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           + L  ++A  +  +     +V+ +SS+    P      Y                E AP 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179
Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYI 240
             RVN + PG + T       ++   R  +E    +  +G   ++             Y+
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYV 239
Query: 241 TGETLVVAGGM 251
           TG TL   GGM
Sbjct: 240 TGITLFADGGM 250

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 16/256 (6%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVV 67
           R  GKVA+VT S +GIG  +A  LG  GA VVV+ +   K+ ++ V ++KA G + I + 
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             +    +   L +Q +  FG +                  T+E   D+++ +N +    
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEE-FDRVFSLNTRGQFF 133
Query: 128 LLQDAAPHLQKGSSVVLISSIAGYQ---PQSSMAMYGVXXXXXXXXXXXXXXEMAPDTRV 184
           + ++A  HL +G  +VL SS        P+ S+   G                      V
Sbjct: 134 VAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSL-FSGSKGAVDSFVRIFSKDCGDKKITV 192
Query: 185 NCVAPGFVPTHFAEYITSN---DGVRQTIEQN-------TLLNRLGTTRDMXXXXXXXXX 234
           N VAPG   T     ++ +   +G   T EQ        + L+R G  +D+         
Sbjct: 193 NAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVS 252
Query: 235 XXXXYITGETLVVAGG 250
               ++ G+ L + GG
Sbjct: 253 KEGEWVNGKVLTLDGG 268

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 83/196 (42%), Gaps = 9/196 (4%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIG 65
           RF GK  I+T S+ GIG   A     EGA V ++ R +  ++E   ++   G+   ++  
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESV--LDKLWDINVK 123
           VV  V+    + ++IN T+ KFGKI                  T + V    K + +N +
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGT-ANTDQPVELYQKTFKLNFQ 141
Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           + I + Q    HL   KG  V + S +AG Q  S    Y                ++   
Sbjct: 142 AVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201
Query: 182 -TRVNCVAPGFVPTHF 196
             RVN V+PG V T F
Sbjct: 202 GVRVNSVSPGAVATGF 217

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 11/246 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA+VT +++GIG  IAE L   GA V+ ++  +         L   G    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALN 66
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+N +  + ++    ++FG +               +++ KE     + + N+ +SI  L
Sbjct: 67  VTNPESIEAVLKAITDEFGGV-DILVNNAAITRDNLLMRMKEEEWSDIMETNL-TSIFRL 124
Query: 130 QDAAPH---LQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A       ++   ++ + S+ G    +  A Y                E+A     VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            VAPGF+ T   + +  ND  R          RLG  R++             YITGETL
Sbjct: 185 TVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 242
Query: 246 VVAGGM 251
            V GGM
Sbjct: 243 HVNGGM 248

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-----RGIEVI 64
            QG+VAIVT    GIG  I + L   G++VV++SRK + +  A  +L+A     +   VI
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DI 120
            + C++ N ++  NL+  T++ FGKI                L   E +  K W    + 
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKI-----NFLVNNGGGQFLSPAEHISSKGWHAVLET 130
Query: 121 NVKSSILLLQDAAPHLQK--GSSVV--LISSIAGYQPQSSMAMY-GVXXXXXXXXXXXXX 175
           N+  +  + +       K  G S+V  ++ + AG+     +A++ G              
Sbjct: 131 NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF----PLAVHSGAARAGVYNLTKSLA 186
Query: 176 XEMA-PDTRVNCVAPGFVPTHFA--EYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXX 232
            E A    R+NCVAPG + +  A   Y +      +   Q     R+G   ++       
Sbjct: 187 LEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFL 246
Query: 233 XXXXXXYITGETLVVAGG 250
                 +ITG+++ V GG
Sbjct: 247 LSPAASFITGQSVDVDGG 264

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 16/256 (6%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVV 67
           R  GKVA+VT S +GIG  +A  LG  GA VVV+ +   K+ ++ V ++KA G + I + 
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             +    +   L +Q +  FG +                  T+E   D+++ +N +    
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEE-FDRVFSLNTRGQFF 133
Query: 128 LLQDAAPHLQKGSSVVLISSIAGYQ---PQSSMAMYGVXXXXXXXXXXXXXXEMAPDTRV 184
           + ++A  HL +G  +VL SS        P+ S+   G                      V
Sbjct: 134 VAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSL-YSGSKGAVDSFVRIFSKDCGDKKITV 192
Query: 185 NCVAPGFVPTHFAEYITSN---DGVRQTIEQN-------TLLNRLGTTRDMXXXXXXXXX 234
           N VAPG   T     ++ +   +G   T EQ        + L+R G  +D+         
Sbjct: 193 NAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVS 252
Query: 235 XXXXYITGETLVVAGG 250
               ++ G+ L + GG
Sbjct: 253 KEGEWVNGKVLTLDGG 268

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 11/246 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA+VT +++GIG  IAE L   GA V+ ++  +         L   G    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALN 66
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+N +  + ++    ++FG +               +++ KE     + + N+ +SI  L
Sbjct: 67  VTNPESIEAVLKAITDEFGGV-DILVNNADITRDNLLMRMKEEEWSDIMETNL-TSIFRL 124
Query: 130 QDAAPH---LQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A       ++   ++ + S+ G    +  A Y                E+A     VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            VAPGF+ T   + +  ND  R          RLG  R++             YITGETL
Sbjct: 185 TVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 242
Query: 246 VVAGGM 251
            V GGM
Sbjct: 243 HVNGGM 248

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 11/246 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA+VT +++GIG  IAE L   GA V+ ++  +         L   G    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALN 66
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+N +  + ++    ++FG +               +++ KE     + + N+ +SI  L
Sbjct: 67  VTNPESIEAVLKAITDEFGGV-DILVNNAGITRDNLLMRMKEEEWSDIMETNL-TSIFRL 124
Query: 130 QDAAPH---LQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A       ++   ++ + S+ G    +  A Y                E+A     VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            VAPGF+ T   + +  ND  R          RLG  R++             YITGETL
Sbjct: 185 TVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 242
Query: 246 VVAGGM 251
            V GGM
Sbjct: 243 HVNGGM 248

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 106/254 (41%), Gaps = 13/254 (5%)
Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEV 63
           K +++ +GK  ++T    GIG  ++     EGA++ ++   ++ + +E    ++  G++ 
Sbjct: 40  KGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKC 99
Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVK 123
           + +   +S+ Q  K+++ +T+ + G +               +       L+K + IN+ 
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF 159
Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-T 182
           S   + + A  HL++G  ++  +SI  Y+   ++  Y                 +     
Sbjct: 160 SYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGI 219
Query: 183 RVNCVAPG-----FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXX 237
           RVN VAPG      +P+ F E   S  G       N  + R G   ++            
Sbjct: 220 RVNGVAPGPIWTPLIPSSFDEKKVSQFG------SNVPMQRPGQPYELAPAYVYLASSDS 273
Query: 238 XYITGETLVVAGGM 251
            Y+TG+ + V GG+
Sbjct: 274 SYVTGQMIHVNGGV 287

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 11/246 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA+VT +++GIG  IAE L   GA V+ ++  +         L   G    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALN 66
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+N +  + ++    ++FG +               +++ KE     + + N+ +SI  L
Sbjct: 67  VTNPESIEAVLKAITDEFGGV-DILVNNAGITRDNLLMRMKEEEWSDIMETNL-TSIFRL 124
Query: 130 QDAAPH---LQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A       ++   ++ + S+ G    +  A +                E+A     VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            VAPGF+ T   + +  ND  R          RLG  R++             YITGETL
Sbjct: 185 TVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 242
Query: 246 VVAGGM 251
            V GGM
Sbjct: 243 HVNGGM 248

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 100/245 (40%), Gaps = 18/245 (7%)
Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQ 74
           +VT  T+GIG GIA      GA+V V++R  + +     +L   G   VIGV   VS+  
Sbjct: 45  LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPG 104
Query: 75  QRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA-A 133
              +     ++ FG +                  T E  L ++ D+NVK ++  +Q   A
Sbjct: 105 SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQ-LSEVLDVNVKGTVYTVQACLA 163
Query: 134 PHLQKG-SSVVLISSIAG-YQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPG 190
           P    G   V+L SSI G        + YG               E+AP    VN + PG
Sbjct: 164 PLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPG 223
Query: 191 FVPTH-----FAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            + T        EYI+   G+ ++I     +  LG+  D+             YITG+ +
Sbjct: 224 NILTEGLVDMGEEYIS---GMARSIP----MGMLGSPVDIGHLAAFLATDEAGYITGQAI 276
Query: 246 VVAGG 250
           VV GG
Sbjct: 277 VVDGG 281

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 99/248 (39%), Gaps = 9/248 (3%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA VT S+ GIG+ +AE     GA V +        ++A    K  G+      C+
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKE-SVLDKLWDINVKSSILL 128
           +S+ +  +  I+Q  + FG I                +        +K+  +++      
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYC 151
Query: 129 LQDAAPHLQKG--SSVVLISSIAG---YQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTR 183
             +     +K    S+++ SSI+G     PQ   A Y                E AP  R
Sbjct: 152 SHNIGKIFKKNGKGSLIITSSISGKIVNIPQ-LQAPYNTAKAACTHLAKSLAIEWAPFAR 210
Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGE 243
           VN ++PG++ T   ++ + +  ++    Q T L R G T+++             + TG 
Sbjct: 211 VNTISPGYIDTDITDFASKD--MKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTTGS 268
Query: 244 TLVVAGGM 251
            +V+ GG 
Sbjct: 269 DVVIDGGY 276

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 8/245 (3%)
Query: 10  FQGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVV 67
            +GKV +VTA+   GIG   A R  LEGA VV+S   ++ + E   +L   G+  V  VV
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
           C V++ +    LI QT+EK G++               +  T E   D++ ++ + S + 
Sbjct: 80  CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEE-WDRVLNVTLTSVMR 138
Query: 128 LLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
             + A  + +    G  +V  +S+ G++ Q S + Y                E      R
Sbjct: 139 ATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVR 198
Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGE 243
           +N V+P      F E  +S++ +   +  +    R     ++             Y+TGE
Sbjct: 199 INAVSPSIARHKFLEKTSSSE-LLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGE 257
Query: 244 TLVVA 248
            + V+
Sbjct: 258 VVSVS 262

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/255 (20%), Positives = 105/255 (41%), Gaps = 13/255 (5%)
Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIE 62
            K +++ +GK  ++T    GIG  ++     EGA++ ++   ++ + +E    ++  G++
Sbjct: 39  YKGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK 98
Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINV 122
            + +   +S+ Q  K+++ +T+ + G +               +       L+K + IN+
Sbjct: 99  CVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINI 158
Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD- 181
            S   + + A  HL++G  ++  +SI  Y+   ++  Y                 +    
Sbjct: 159 FSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKG 218
Query: 182 TRVNCVAPG-----FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXX 236
            RVN VAPG      +P+ F E   S  G       N    R G   ++           
Sbjct: 219 IRVNGVAPGPIWTPLIPSSFDEKKVSQFG------SNVPXQRPGQPYELAPAYVYLASSD 272
Query: 237 XXYITGETLVVAGGM 251
             Y+TG+ + V GG+
Sbjct: 273 SSYVTGQXIHVNGGV 287

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F G+ A+VT    GIG   A      GA +V+S   Q  +++AV  L+ +G +  GVVC 
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW--DINVKSSIL 127
           V +  +   L ++     G +                    +   D  W  DI++  SI 
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHD---DWRWVIDIDLWGSIH 145
Query: 128 LLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGV 162
            ++   P L +   G  +   +S AG  P + +  YGV
Sbjct: 146 AVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGV 183

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 94/263 (35%), Gaps = 34/263 (12%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           +QGK AIV   T G G     RL   GA V+++ R + N+        AR  E  G   H
Sbjct: 6   YQGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNI--------ARIREEFGPRVH 57
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXIL-------------QTKESVLDK 116
                     +   I    +I               +L             Q  E+  D+
Sbjct: 58  A---------LRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDR 108
Query: 117 LWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
            + +N K +   +Q   P +++G S+V  SS+A        ++Y                
Sbjct: 109 QFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAA 168
Query: 177 EMAP-DTRVNCVAPGFV--PTHFAEYITSNDGVR-QTIEQNTLLNRLGTTRDMXXXXXXX 232
           E+ P   RVN V+PGF+  PT     IT  +    +T+  N    +   T D        
Sbjct: 169 ELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLF 228
Query: 233 XXXXXXYITGETLVVAGGMPSRL 255
                 + TG  L V GG+  +L
Sbjct: 229 LAFEATFTTGAKLAVDGGLGQKL 251

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 94/263 (35%), Gaps = 34/263 (12%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           +QGK AIV   T G G     RL   GA V+++ R + N+        AR  E  G   H
Sbjct: 5   YQGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNI--------ARIREEFGPRVH 56
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXIL-------------QTKESVLDK 116
                     +   I    +I               +L             Q  E+  D+
Sbjct: 57  A---------LRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDR 107
Query: 117 LWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
            + +N K +   +Q   P +++G S+V  SS+A        ++Y                
Sbjct: 108 QFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAA 167
Query: 177 EMAP-DTRVNCVAPGFV--PTHFAEYITSNDGVR-QTIEQNTLLNRLGTTRDMXXXXXXX 232
           E+ P   RVN V+PGF+  PT     IT  +    +T+  N    +   T D        
Sbjct: 168 ELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLF 227
Query: 233 XXXXXXYITGETLVVAGGMPSRL 255
                 + TG  L V GG+  +L
Sbjct: 228 LAFEATFTTGAKLAVDGGLGQKL 250

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 15/258 (5%)
Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIG 65
           +K   GKVA+ T + +GIG GIA  LG  GASVVV+     K  +E V +LK  G + + 
Sbjct: 16  SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVA 75
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
           +   +S   +   L ++ +  FG +               +  T+E + DK++++N +  
Sbjct: 76  IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQE-LFDKVFNLNTRGQ 134
Query: 126 ILLLQDAAPHLQKGSSVVLISSIAGYQPQ-SSMAMYGVXXXXXXXXXXXXXXEM-APDTR 183
             + Q    H ++G  ++L SSIA       + A+Y                +  A    
Sbjct: 135 FFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVT 194
Query: 184 VNCVAPGFVPT--------HFAE---YITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXX 232
           VNC+APG V T        H+A         + + + +     L R+G   D+       
Sbjct: 195 VNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL 254
Query: 233 XXXXXXYITGETLVVAGG 250
                 +I G+ + + GG
Sbjct: 255 CQEESEWINGQVIKLTGG 272

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 15/255 (5%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVC 68
            +GKVA+VT + +GIG  +A  LG  G  V+V+ +   ++ +E V  +K  G +   V  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
           +V   +    +  + ++ FGK+                  T E   D+++ IN +    +
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE-FDRVFTINTRGQFFV 145
Query: 129 LQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
            ++A  HL+ G  ++L+ SI G  +     A+Y                +MA     VN 
Sbjct: 146 AREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNV 205
Query: 187 VAPGFVPTHFA-----EYIT-----SNDGVRQTIE-QNTLLNRLGTTRDMXXXXXXXXXX 235
           VAPG + T        EYI      SN+ V +    Q + L R+G   D+          
Sbjct: 206 VAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASN 265
Query: 236 XXXYITGETLVVAGG 250
              ++TG+ + + GG
Sbjct: 266 DGGWVTGKVIGIDGG 280

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 15/255 (5%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVC 68
            +GKVA+VT + +GIG  +A  LG  G  V+V+ +   ++ +E V  +K  G +   V  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
           +V   +    +  + ++ FGK+                  T E   D+++ IN +    +
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE-FDRVFTINTRGQFFV 145
Query: 129 LQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
            ++A  HL+ G  ++L+ SI G  +     A+Y                +MA     VN 
Sbjct: 146 AREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNV 205
Query: 187 VAPGFVPTHFA-----EYIT-----SNDGVRQTIE-QNTLLNRLGTTRDMXXXXXXXXXX 235
           VAPG + T        EYI      SN+ V +    Q + L R+G   D+          
Sbjct: 206 VAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASN 265
Query: 236 XXXYITGETLVVAGG 250
              ++TG+ + + GG
Sbjct: 266 DGGWVTGKVIGIDGG 280

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 10/188 (5%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           + +G+  ++T    G+G  + +R   EGA V V  +  + + E        G  V+G+V 
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---HGDNVLGIVG 58
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWD----INVKS 124
            V + + +K   ++ + +FGKI               ++   E  LD  +D    INVK 
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118
Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT 182
            I  ++   P L   +G+ +  IS+ AG+ P     +Y                E+AP  
Sbjct: 119 YIHAVKACLPALVASRGNVIFTISN-AGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYV 177
Query: 183 RVNCVAPG 190
           RVN V  G
Sbjct: 178 RVNGVGSG 185

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 98/248 (39%), Gaps = 9/248 (3%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVIGV 66
           R + + A+VT    GIG   A     EGA V ++    +  D   VK  ++  G + + +
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL 105
Query: 67  VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
              +S+    ++L+++  E  G +               I         + + +NV +  
Sbjct: 106 PGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALF 165
Query: 127 LLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRVN 185
            + Q+A P L KG+S++  SSI  YQP   +  Y                ++A    RVN
Sbjct: 166 WITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVN 225
Query: 186 CVAPGFVPTHFAEYIT---SNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITG 242
            VAPG  P   A  I+   + D + Q   Q T + R G   ++             Y+T 
Sbjct: 226 IVAPG--PIWTALQISGGQTQDKIPQ-FGQQTPMKRAGQPAELAPVYVYLASQESSYVTA 282
Query: 243 ETLVVAGG 250
           E   V GG
Sbjct: 283 EVHGVCGG 290

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 12/248 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             GK A++T ++ GIG  +A      GA V V++R    +     ++   G + + + C 
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+   Q + +++Q   + G I               +    E    ++ D NV    L  
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEE-FQRIQDTNVTGVFLTA 148
Query: 130 QDAAPHLQK---GSSVVLISSIAGY---QPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DT 182
           Q AA  +     G +++  +S++G+    PQ  ++ Y                E+AP   
Sbjct: 149 QAAARAMVDQGLGGTIITTASMSGHIINIPQ-QVSHYCTSKAAVVHLTKAMAVELAPHQI 207
Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITG 242
           RVN V+PG++ T   E +     +    E    L R+G   ++             Y+TG
Sbjct: 208 RVNSVSPGYIRTELVEPLADYHALW---EPKIPLGRMGRPEELTGLYLYLASAASSYMTG 264
Query: 243 ETLVVAGG 250
             +V+ GG
Sbjct: 265 SDIVIDGG 272

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 10/251 (3%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GK+A+VT ++ GIGF IA      GA++V +   Q+ VD  +   KA GI   G VC 
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCD 91
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V++    + ++ Q   + G I               I  T      ++ DI++ +  ++ 
Sbjct: 92  VTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQ-FRQVIDIDLNAPFIVS 150
Query: 130 QDAAPHL-QKG-SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNC 186
           +   P + +KG   ++ I S+     + +++ Y                E    + + N 
Sbjct: 151 KAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNG 210
Query: 187 VAPGFVPTHFAEYITS--NDGVRQTIEQ----NTLLNRLGTTRDMXXXXXXXXXXXXXYI 240
           + PG++ T     +     DG R   +Q     T   R G   D+             ++
Sbjct: 211 IGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMGPAVFLASDASNFV 270
Query: 241 TGETLVVAGGM 251
            G  L V GG+
Sbjct: 271 NGHILYVDGGI 281

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 100/246 (40%), Gaps = 11/246 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA+VT +++GIG  IAE L   GA V+ ++  +         L   G    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALN 66
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+N +  + ++    ++FG +               +++ KE     + + N+ +SI  L
Sbjct: 67  VTNPESIEAVLKAITDEFGGV-DILVNNAGITRDNLLMRMKEEEWSDIMETNL-TSIFRL 124
Query: 130 QDAAPH---LQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A       ++   ++ + S+ G    +  A Y                E+A     VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            VAPG + T   + +  ND  R          RLG  R++             YITGETL
Sbjct: 185 TVAPGAIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 242
Query: 246 VVAGGM 251
            V GGM
Sbjct: 243 HVNGGM 248

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 202 VNAVCPGFVETPMA 215

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 202 VNAVCPGFVETPMA 215

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 202 VNAVCPGFVETPMA 215

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 66
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 67  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 121
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 122 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 181
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 182 VNAVCPGFVETPMA 195

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGA----TAE-LADELWLDVVETNLTGVFRV 137
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 198 VNAVCPGFVETPMA 211

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 14/197 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFAEYI 200
           VN V PGFV T  A  +
Sbjct: 202 VNAVCPGFVETPMAASV 218

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 9/245 (3%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             G+ A+VT +T G+G  IA  L  +GA V +   +++ + E   +L  R   +     +
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGER---IFVFPAN 64
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           +S+ +  K L  +  E+ G +               +  + E   D +  +N+ S   L 
Sbjct: 65  LSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDED-WDAVLTVNLTSVFNLT 123
Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           ++    +  ++   ++ I+SI G       A Y                E+A  +  VNC
Sbjct: 124 RELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNC 183
Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLV 246
           +APGF+ +     +  N+  +  I  N  + R+G   D+             Y+TG+TL 
Sbjct: 184 IAPGFIESAMTGKL--NEKQKDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTLH 241
Query: 247 VAGGM 251
           V GGM
Sbjct: 242 VNGGM 246

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 137
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 184 VNCVAPGFVPTHFA 197
           VN V PGFV T  A
Sbjct: 198 VNAVCPGFVETPMA 211

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 9/245 (3%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             G+ A+VT +T G+G  IA  L  +GA V +   +++ + E   +L  R   +     +
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGER---IFVFPAN 61
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           +S+ +  K L  +  E+ G +               +  + E   D +  +N+ S   L 
Sbjct: 62  LSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDED-WDAVLTVNLTSVFNLT 120
Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           ++    +  ++   ++ I+SI G       A Y                E+A  +  VNC
Sbjct: 121 RELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNC 180
Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLV 246
           +APGF+ +     +  N+  +  I  N  + R+G   D+             Y+TG+TL 
Sbjct: 181 IAPGFIESAMTGKL--NEKQKDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTLH 238
Query: 247 VAGGM 251
           V GGM
Sbjct: 239 VNGGM 243

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 98/256 (38%), Gaps = 16/256 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             GKVAIVT +  GIG  +A RL  EG  V+ +       D A  K+   G         
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVD 83
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           VS+ QQ   +++  +  FG +               I  T E   D++  IN++ + L  
Sbjct: 84  VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVED-FDRVIAINLRGAWLCT 142
Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEM-APDTRVNC 186
           + AAP +  + G ++V +SS+AG         YG+              E+ +   R N 
Sbjct: 143 KHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNT 202
Query: 187 VAPGFVPTHFAEYITS-------NDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXY 239
           + P FV T   +   +         G R  I +  L  R+    +M              
Sbjct: 203 LLPAFVDTPMQQTAMAMFDGALGAGGARSMIAR--LQGRMAAPEEMAGIVVFLLSDDASM 260
Query: 240 ITGETLVVAGGMPSRL 255
           ITG T +  GG  + L
Sbjct: 261 ITGTTQIADGGTIAAL 276

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 99/245 (40%), Gaps = 11/245 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA+VT +++GIG  IAE L   GA V+ ++  +         L   G    G   +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGXALN 63
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+N +  + ++    ++FG +               + + KE     + + N+ +SI  L
Sbjct: 64  VTNPESIEAVLKAITDEFGGV-DILVNNAGITRDNLLXRXKEEEWSDIXETNL-TSIFRL 121
Query: 130 QDA---APHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A       ++   ++ + S+ G    +  A Y                E+A     VN
Sbjct: 122 SKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVN 181
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
            VAPGF+ T   + +  ND  R          RLG  R++             YITGETL
Sbjct: 182 TVAPGFIETDXTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 239
Query: 246 VVAGG 250
            V GG
Sbjct: 240 HVNGG 244

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 95/245 (38%), Gaps = 6/245 (2%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGKVA+VT +++GIG  IA  LG  GA V+ ++      ++    LKA G+E  G+V  
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLD 84
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           VS+ +     +    +  G+                +    +   D + + N+ S   L 
Sbjct: 85  VSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDVV-NTNLNSLYRLS 143
Query: 130 QDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
           +     + K     ++ I S+ G    +    Y                E+      VN 
Sbjct: 144 KAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNA 203
Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLV 246
           VAPGF+ T     +   +  R+ +     L RLG   ++             Y+TG T+ 
Sbjct: 204 VAPGFIDTDMTRELP--EAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVP 261
Query: 247 VAGGM 251
           V GGM
Sbjct: 262 VNGGM 266

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 96/251 (38%), Gaps = 10/251 (3%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M +R + K+A++T    GIG  IAER  +EGA + ++        EA ++   R   V+ 
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGR--RVLT 58
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
           V C VS     +    Q I  FG+                   T E    K ++INV S 
Sbjct: 59  VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQ-WKKTFEINVDSG 117
Query: 126 ILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-T 182
            L+ +   P +++     ++ ++S   +    +   Y                ++  D  
Sbjct: 118 FLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGI 177
Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL--LNRLGTTRDMXXXXXXXXXXXXXYI 240
            VN +AP  V T   E   S       +  N L  + RL    D+             +I
Sbjct: 178 TVNAIAPSLVRTATTE--ASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFI 235
Query: 241 TGETLVVAGGM 251
           TG+TL V GGM
Sbjct: 236 TGQTLAVDGGM 246

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 5/249 (2%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           +  + KV IVT +  GIG  IA++  L  + VV     +  +++ V +L+  G EV+GV 
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             VS  +  +  + +T E + +I               + +  + + +++  +N+ S+  
Sbjct: 63  ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122
Query: 128 LLQDAAP-HLQKGSSVVL-ISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
             +   P  L++G  V++  +SIAG +   + A Y V                     R 
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182
Query: 185 NCVAPGFVPTH--FAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITG 242
             V PG V T+        S  G+R   +  +L +RL    D+             ++ G
Sbjct: 183 VAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNG 242
Query: 243 ETLVVAGGM 251
           + +VV GG+
Sbjct: 243 DAVVVDGGL 251

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 96/257 (37%), Gaps = 24/257 (9%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT + QGIG  IA RL  +G +V ++            ++   G   + V   VS+
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
             Q    + Q  +  G                    T E ++DK+++INVK  I  +Q A
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPE-IVDKVYNINVKGVIWGIQAA 121
Query: 133 APHLQK---GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
               +K   G  ++   S AG+     +A+Y                ++AP    VN   
Sbjct: 122 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181
Query: 189 PGFVPTHFAEYITSNDGVRQTIE--------------QNTLLNRLGTTRDMXXXXXXXXX 234
           PG V T     I      RQ  E              +   L RL    D+         
Sbjct: 182 PGIVKTPMWAEID-----RQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLAS 236
Query: 235 XXXXYITGETLVVAGGM 251
               Y+TG++L++ GGM
Sbjct: 237 PDSDYMTGQSLLIDGGM 253

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 98/256 (38%), Gaps = 13/256 (5%)
Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           + R  GKVAI+T  T GIG  IA +   EGA V+++ R   +V E   K      ++   
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDR-HSDVGEKAAKSVGTPDQIQFF 59
Query: 67  VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
               S+      L + T + FG +               + +T  +   KL  +N+    
Sbjct: 60  QHDSSDEDGWTKLFDATEKAFGPV-STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 127 LLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA---P 180
              +     ++    G+S++ +SSI G+    S+  Y                + A    
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ--NTLLNRLGTTRDMXXXXXXXXXXXXX 238
           D RVN V PG++ T   + +    G  + + Q   T +  +G   D+             
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLP---GAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESK 235
Query: 239 YITGETLVVAGGMPSR 254
           + TG   VV GG  ++
Sbjct: 236 FATGSEFVVDGGYTAQ 251

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             + + L+   +E++G +                  T E + D+LW    + N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 LQD---AAPHLQKGSS-VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   L++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFA 197
           VN V PG+V T  A
Sbjct: 202 VNAVCPGWVETPMA 215

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 7/249 (2%)
Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV-KLKARGIEVIG 65
           A +F GK  ++T +++GIG  IA+ L   G  V ++ R    V +A+  +L+ +G +   
Sbjct: 24  AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAV 83
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
           +    ++       I   ++  G +               I + K      + D N+ S+
Sbjct: 84  IKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAI-KMKTEDFHHVIDNNLTSA 142
Query: 126 ILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDT 182
            +  ++A   + K    SVV ++SI G +       Y                E A  + 
Sbjct: 143 FIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNI 202
Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITG 242
           R N V PGF+ T     +   D ++    +N  LNRLG+ +++             YITG
Sbjct: 203 RFNSVTPGFIETDMNANLK--DELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITG 260
Query: 243 ETLVVAGGM 251
           ETL V GG+
Sbjct: 261 ETLKVNGGL 269

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 98/256 (38%), Gaps = 13/256 (5%)
Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           + R  GKVAI+T  T GIG  IA +   EGA V+++ R   +V E   K      ++   
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR-HSDVGEKAAKSVGTPDQIQFF 59
Query: 67  VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
               S+      L + T + FG +               + +T  +   KL  +N+    
Sbjct: 60  QHDSSDEDGWTKLFDATEKAFGPV-STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 127 LLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA---P 180
              +     ++    G+S++ +SSI G+    S+  Y                + A    
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ--NTLLNRLGTTRDMXXXXXXXXXXXXX 238
           D RVN V PG++ T   + +    G  + + Q   T +  +G   D+             
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLP---GAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESK 235
Query: 239 YITGETLVVAGGMPSR 254
           + TG   VV GG  ++
Sbjct: 236 FATGSEFVVDGGYTAQ 251

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 88/220 (40%), Gaps = 27/220 (12%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE--- 62
           MA    GKVA+VT + QGIG   AE L L+GA V +         EA V+ KA   E   
Sbjct: 1   MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNL----EAGVQCKAALHEQFE 56
Query: 63  ---VIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWD 119
               + + C V++ QQ ++   + ++ FG++                    E   +K   
Sbjct: 57  PQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV---------NNEKNWEKTLQ 107
Query: 120 INVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVXXX---XXXXXX 171
           IN+ S I        ++ K     G  ++ +SS+AG  P +   +Y              
Sbjct: 108 INLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSA 167
Query: 172 XXXXXEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIE 211
                 M    R+N + PGFV T   E I   + + Q IE
Sbjct: 168 ALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIE 207

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 92/257 (35%), Gaps = 13/257 (5%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV-- 63
           M  R +  +A+VT +  GIG  ++ RL  EGA+V      +    E V  L   G +   
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60
Query: 64  -----IGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
                      VS  +  + L+ Q    F +                +L   E   DK+ 
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVI 120
Query: 119 DINVKSSILLLQDAAPHLQKG---SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXX 175
            +N+K + L+ Q AA  L       S++ ISSI G         Y               
Sbjct: 121 AVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAA 180
Query: 176 XEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXX 234
            E+     R N V PGF+ T   + +     V   I +   +  LG   D+         
Sbjct: 181 RELGRHGIRCNSVLPGFIATPMTQKVPQK--VVDKITEMIPMGHLGDPEDVADVVAFLAS 238
Query: 235 XXXXYITGETLVVAGGM 251
               YITG ++ V GG+
Sbjct: 239 EDSGYITGTSVEVTGGL 255

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 9/245 (3%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV-KLKARGIEVIGVVC 68
             GK A VT  ++GIG  IA+RL LEGA+V ++        +AVV +++  G   + +  
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
              + +  +  I +T+E  G +               + +T  +  D++  +N ++  + 
Sbjct: 89  DNRDAEAIEQAIRETVEALGGL-DILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVA 147
Query: 129 LQDAAPHLQKGSSVVLI-SSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           ++ A+ HL  G  ++ I S++A   P   +++Y                ++ P    VN 
Sbjct: 148 IRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNI 207
Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDMXXXXXXXXXXXXXYITGETL 245
           V PG   T         DG     ++  +     G  +D+             ++TG +L
Sbjct: 208 VHPGSTDTD----XNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASL 263
Query: 246 VVAGG 250
            + GG
Sbjct: 264 TIDGG 268

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 100/259 (38%), Gaps = 22/259 (8%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           + F  KVAIVT  + GIG  + + L   GA VV  S  +K+        K          
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK---------- 59
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             V+N ++ K  + +T +K+G+I                L   E +  ++ D+NV  S L
Sbjct: 60  IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTE-IWRRIIDVNVNGSYL 118
Query: 128 LLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTRVN 185
           + +   P +      S++ I+S+  Y    + A Y                + AP  R N
Sbjct: 119 MAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCN 178
Query: 186 CVAPGFVPTHFA------EYITSNDGVRQTIEQ---NTLLNRLGTTRDMXXXXXXXXXXX 236
            V PG + T         E     + V + IE+      + R+G   ++           
Sbjct: 179 AVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDR 238
Query: 237 XXYITGETLVVAGGMPSRL 255
             +ITG  L V GG+ S+L
Sbjct: 239 SSFITGACLTVDGGLLSKL 257

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 93/250 (37%), Gaps = 12/250 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GKVA++T +  G G G+A+R    GA VV+  R +   +    ++   G   + V   
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAAD 63
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           +S        +   + KFGK+                   +    D++  +NV+   L+ 
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMT 123
Query: 130 QDAAPHLQ----KGSSVVL--ISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DT 182
               PH +    KG   V+  ++S    +P+ ++A Y                E+AP   
Sbjct: 124 SKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKI 183
Query: 183 RVNCVAP--GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYI 240
           RV  + P  G  P         ++ +R+    +  + RL    D+              I
Sbjct: 184 RVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMI 243
Query: 241 TGETLVVAGG 250
           TG  L V GG
Sbjct: 244 TGVALDVDGG 253

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 20/243 (8%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F+GK+A+VT +++GIG  IAE L   GA V+ ++  +         L A G    G++ +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG---KGLMLN 59
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V++    ++++ +   +FG++               +++ K+   + + + N+ SS+  L
Sbjct: 60  VTDPASIESVLEKIRAEFGEV-DILVNNAGITRDNLLMRMKDEEWNDIIETNL-SSVFRL 117
Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
             A            I +I G       A Y                E+A     VN VA
Sbjct: 118 SKAVMRAMMKKRHGRIITIGG------QANYAAAKAGLIGFSKSLAREVASRGITVNVVA 171
Query: 189 PGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLVVA 248
           PGF+ T        +D  R  I       RLG  +++             YITGETL V 
Sbjct: 172 PGFIET--------SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVN 223
Query: 249 GGM 251
           GGM
Sbjct: 224 GGM 226

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 100/259 (38%), Gaps = 16/259 (6%)
Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
            M    + KVAI+T +  GIG   +  L   GA VV++   + ++  A   +  RG   +
Sbjct: 4   SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-GRG--AV 60
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXIL-QTKESVLDKLWDINVK 123
             V  ++N    + LI+ TI+ FG++               ++ Q    V D  + +N +
Sbjct: 61  HHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNAR 120
Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
            ++L+ + A P L    G ++V ISS   +        Y                +    
Sbjct: 121 GTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRH 180
Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTI----EQNTLLNRLGTTRDMXXXXXXXXXXX 236
             R N +APG V T   E      G+ Q I      + L  R+G   ++           
Sbjct: 181 GVRCNAIAPGLVRTPRLEV-----GLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDR 235
Query: 237 XXYITGETLVVAGGMPSRL 255
             +ITG+ +    G+ + L
Sbjct: 236 AAFITGQVIAADSGLLAHL 254

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 106/256 (41%), Gaps = 17/256 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLE--GASVVVS-SRKQKNVDEAVVKL-KARGIEVIG 65
            +GKV +VT ++   G GI    G    GA+V ++ + + +  +E V +L K  GI+   
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
             C V + +  + L+   +  FG+I               IL       + +  +++  +
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQI-DAFIANAGATADSGILDGSVEAWNHVVQVDLNGT 136
Query: 126 ILLLQDAAPHL-QKGS-SVVLISSIAGY-----QPQSSMAMYGVXXXXXXXXXXXXXXEM 178
               +    H  ++G+ S+V+ +S++G+     Q Q+S   Y V              E 
Sbjct: 137 FHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTS---YNVAKAGCIHMARSLANEW 193
Query: 179 APDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXX 238
               RVN ++PG++ T  ++++      +Q       + R G  +++             
Sbjct: 194 RDFARVNSISPGYIDTGLSDFVPKE--TQQLWHSMIPMGRDGLAKELKGAYVYFASDAST 251
Query: 239 YITGETLVVAGGMPSR 254
           Y TG  L++ GG  +R
Sbjct: 252 YTTGADLLIDGGYTTR 267

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 6/249 (2%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R +GK+AIVT ++ GIG   A     EGA VVV++R    + E   ++   G E   + 
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALA 63
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             V +    + L+   + +FG +               I         +  D N+ S+ L
Sbjct: 64  GDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFL 123
Query: 128 LLQDAAPHLQK--GSSVVLISSIAGYQPQ-SSMAMYGVXXXXXXXXXXXXXXEM-APDTR 183
             +   P +    G S+   SS  G+    + +A Y                E+ A   R
Sbjct: 124 AAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIR 183
Query: 184 VNCVAPGF--VPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYIT 241
           VN + PG    P +FA    +    R  +E    L R+    ++             ++T
Sbjct: 184 VNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVT 243
Query: 242 GETLVVAGG 250
           G  L+  GG
Sbjct: 244 GAALLADGG 252

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 22/249 (8%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT +++GIGF +A  L  +GA+VV ++  Q + ++     K +G +  G+V ++S+
Sbjct: 6   KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLNISD 65
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKL----WDINVKSSILL 128
            +  +N        F +I               I  T++++  +     W   + +++  
Sbjct: 66  IESIQNF-------FAEIKAENLAIDILVNNAGI--TRDNLXXRXSEDEWQSVINTNLSS 116
Query: 129 LQDAAPHLQKGSS------VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-D 181
           +   +    +G        ++ I S+ G         Y                E+A  +
Sbjct: 117 IFRXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRN 176
Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYIT 241
             VN VAPGF+ T   + +T  D  +  I       ++G  +D+             YIT
Sbjct: 177 ITVNVVAPGFIATDXTDKLT--DEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYIT 234
Query: 242 GETLVVAGG 250
           G+TL V GG
Sbjct: 235 GQTLHVNGG 243

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 4/194 (2%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KV ++T ++ GIG GIA  LG+ GA +++ +R+Q  ++    +++  G   +  V  V++
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTD 64
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
                      ++ +G+I               +   K    +++ D+N+K  +  +   
Sbjct: 65  RHSVAAFAQAAVDTWGRI-DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAV 123
Query: 133 APHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVAPG 190
            P +  Q+   ++ I SI       + A+Y                E + + RV CV PG
Sbjct: 124 LPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE-STNIRVTCVNPG 182
Query: 191 FVPTHFAEYITSND 204
            V +  A  IT  +
Sbjct: 183 VVESELAGTITHEE 196

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI--GV 66
           + +GK A+VT ST GIG  IA  L  EGA+V+++ R+++NV+E + +++A+  + I   V
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 67  VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
           V  +   Q  +++    IEK+ K+                    E    KL+++N+ S +
Sbjct: 67  VADLGTEQGCQDV----IEKYPKVDILINNLGIFEPVEYFDIPDEDWF-KLFEVNIXSGV 121
Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMY 160
            L +        +K   V+ I+S A   P    A Y
Sbjct: 122 RLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHY 157

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 9/257 (3%)
Query: 1   MEKMKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
            + M++   F  +G+ A+VT S++GIG  IAE L   GA V++   K  +      ++ A
Sbjct: 20  FQSMRLETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA 79
Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW 118
            G     +   +S      +LI +  E    +                  T   +  +L 
Sbjct: 80  SGGTAQELAGDLSEAGAGTDLIERA-EAIAPVDILVINASAQINATLSALTPNDLAFQL- 137
Query: 119 DINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXX 176
            +N+ S++ +LQ A P +  +K   VV I SI   +P+S +  Y                
Sbjct: 138 AVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQAR 197
Query: 177 EMAPDT-RVNCVAPGFVPTHFAEYITSND--GVRQTIEQNTLLNRLGTTRDMXXXXXXXX 233
           + A D   +N +APG V T       + D  G  + +     + R G   +M        
Sbjct: 198 DFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLA 257
Query: 234 XXXXXYITGETLVVAGG 250
                ++TGET+ + GG
Sbjct: 258 SEACSFMTGETIFLTGG 274

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 96/251 (38%), Gaps = 19/251 (7%)
Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GK A+VT S +G+GF  AE L   GA V+++  +   + E+V  L  +G +  GV   V+
Sbjct: 9   GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT 68
Query: 72  NGQQRKNLINQTIEK-FGKIXXXXXXXXXXXXXXXILQTKESV------LDKLWDINVKS 124
           +           IE  F K+               I   K  V        K+ D N+ S
Sbjct: 69  D--------ELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTS 120
Query: 125 SILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP- 180
           + L+ + AA  +     G  ++ I S+     + ++A Y                E A  
Sbjct: 121 AFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQF 180
Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYI 240
           + + N + PG++ T     +  +      ++ +T   R G   ++             YI
Sbjct: 181 NIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYI 240
Query: 241 TGETLVVAGGM 251
            G+ + V GG 
Sbjct: 241 NGQIIYVDGGW 251

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 23/233 (9%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV-------------SSRKQKNVDEA 52
           MA + +G+VA +T + +G G   A R+  EGA ++                    ++ E 
Sbjct: 5   MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSET 64
Query: 53  VVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKES 112
           V  ++A    ++  V    +  + + +++  +   G++                  T E 
Sbjct: 65  VRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPED 124
Query: 113 VLDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXX 169
             D + DINV  +   +   AP +    +G S++LISS AG + Q  M  Y         
Sbjct: 125 FRDVM-DINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTG 183
Query: 170 XXXXXXXEMAPDT-RVNCVAPGFV--PTHFAEYITSNDGVRQTIEQNTLLNRL 219
                  E+   + RVN V PG V  P    + +T+   V Q +E N  L+ +
Sbjct: 184 LARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTA---VGQAMETNPQLSHV 233

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 99/255 (38%), Gaps = 17/255 (6%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GK A++T S +GIG   AE    EGA V ++     N++ A       G     +  
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIA---DINLEAARATAAEIGPAACAIAL 58
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
            V++       + + ++++G I               +  T+ES  D+L+ INV  ++ +
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRES-YDRLFAINVSGTLFM 117
Query: 129 LQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
           +Q  A  +    +G  ++ ++S AG + ++ + +Y                 +      V
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 177
Query: 185 NCVAPGF--------VPTHFAEYITSNDGVRQ-TIEQNTLLNRLGTTRDMXXXXXXXXXX 235
           N +APG         V   FA+Y     G ++  +       R+G   D+          
Sbjct: 178 NAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATP 237
Query: 236 XXXYITGETLVVAGG 250
              YI  +T  V GG
Sbjct: 238 EADYIVAQTYNVDGG 252

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 103/249 (41%), Gaps = 20/249 (8%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GK  +VT +  GIG    +    EGAS+V   R+++ + EAV  L+A   E I VV 
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEA---EAIAVVA 59
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXI---LQTKESVLDKLWDINVKSS 125
            VS+ +  + +  + +E+FG++                   L+  E VL     +N+  S
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVL----RVNLTGS 115
Query: 126 ILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTRV 184
            L+ + A   L++G S+VL  S+AG      +A Y                E+A    RV
Sbjct: 116 FLVARKAGEVLEEGGSLVLTGSVAGLG-AFGLAHYAAGKLGVVGLARTLALELARKGVRV 174
Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQN---TLLNRLGTTRDMXXXXXXXXXXXXXYIT 241
           N + PG + T     +          EQ    + L R G   ++             YIT
Sbjct: 175 NVLLPGLIQTPMTAGLPP-----WAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYIT 229
Query: 242 GETLVVAGG 250
           G+ L V GG
Sbjct: 230 GQALYVDGG 238

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 92/255 (36%), Gaps = 17/255 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             G+ AIVT  ++GIG  IA  L   GA+V ++          V  L+  G     V   
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG---FAVEVD 66
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+        + + I+  G                 +  T E   D  +D+N +   L  
Sbjct: 67  VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEE-WDFNFDVNARGVFLAN 125
Query: 130 QDAAPHLQKGSS---VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
           Q A  H    ++   +V  +S+A       +A Y                EMAP + RVN
Sbjct: 126 QIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVN 185
Query: 186 CVAPGFVPTHFAEYI---------TSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXX 236
           CV PGFV T   E            + + VR      T L R+    D+           
Sbjct: 186 CVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDA 245
Query: 237 XXYITGETLVVAGGM 251
             ++TG+ + V GG+
Sbjct: 246 ARFMTGQGINVTGGV 260

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 83/210 (39%), Gaps = 21/210 (10%)
Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           MEK+    R   +VAIVT   Q IG      L   GA V+++   +    +AV  L+  G
Sbjct: 6   MEKL----RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG 61
Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTK-ESVLDKLW- 118
            +V  VV  V+N +  +N +    E+ G++               I + K E + D  W 
Sbjct: 62  HDVSSVVMDVTNTESVQNAVRSVHEQEGRV-----DILVACAGICISEVKAEDMTDGQWL 116
Query: 119 ---DINVKSSILLLQDAAPHL--QKGSSVVLISSIAGY---QPQSSMAMYGVXXXXXXXX 170
              DIN+       Q     +  QK   +V I S++G    +PQ   A Y          
Sbjct: 117 KQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQ-AAYNASKAGVHQY 175
Query: 171 XXXXXXEMAPD-TRVNCVAPGFVPTHFAEY 199
                 E AP   R N VAP ++ T    +
Sbjct: 176 IRSLAAEWAPHGIRANAVAPTYIETTLTRF 205

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 101/265 (38%), Gaps = 32/265 (12%)
Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           MK     +G+ A+VT +  G+G  IA  L   GA VV ++R+  +             E 
Sbjct: 1   MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD-------------ET 47
Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESV------LDKL 117
           + ++     G     LI+       K                I++  +SV       D++
Sbjct: 48  LDIIAK-DGGNASALLIDFADPLAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEV 106
Query: 118 WDINVKSSILLLQDAAPHL-QKGSS--VVLISSIAGYQ-----PQSSMAMYGVXXXXXXX 169
            D+N+K+     Q  A  L  KG S  VV I+S+  +Q     P  + A +GV       
Sbjct: 107 MDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLL 166
Query: 170 XXXXXXXEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXX 229
                    A    VN +APG++ T+  E + ++    + I +     R G + D+    
Sbjct: 167 ANEWA----AKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAA 222
Query: 230 XXXXXXXXXYITGETLVVAGGMPSR 254
                    Y+ G  L V GG  +R
Sbjct: 223 VFLSSAAADYVHGAILNVDGGWLAR 247

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/253 (19%), Positives = 105/253 (41%), Gaps = 16/253 (6%)
Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           G+ A+VT S++G+G  +AE L + GA ++++      V + V + +  G +   V   V+
Sbjct: 26  GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVT 85
Query: 72  NGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXI------LQTKESVLDKLWDINVKSS 125
           +        ++ IE F ++               I      ++ + +   ++ D N+ S+
Sbjct: 86  SE-------SEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSA 138
Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DT 182
            ++ ++AA  +  +    +V I S+     ++++A Y V              E A    
Sbjct: 139 FMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGI 198
Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITG 242
           + N + PG++ T   + +  N      ++  T   R G  +++             Y+ G
Sbjct: 199 QANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNG 258
Query: 243 ETLVVAGGMPSRL 255
           + + V GGM S L
Sbjct: 259 QIIYVDGGMLSVL 271

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 11/245 (4%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +V IVT    GIG   AE     GA VVV+     N D AV      G +  GV   VS+
Sbjct: 28  RVCIVTGGGSGIGRATAELFAKNGAYVVVA---DVNEDAAVRVANEIGSKAFGVRVDVSS 84
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
            +  ++ + +T  K+G++               ++   E   D++  +NVK   L  +  
Sbjct: 85  AKDAESXVEKTTAKWGRV-DVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYV 143
Query: 133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TRVNCVAP 189
            P  ++  G S++  +S       +    Y                + A +  RVN VAP
Sbjct: 144 IPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAP 203
Query: 190 GFVPT-HFAE-YITSND--GVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
           G + + +F + +  + D   +R       + +R GT  ++             + TG  L
Sbjct: 204 GTIDSPYFTKIFAEAKDPAKLRSDFNARAVXDRXGTAEEIAEAXLFLASDRSRFATGSIL 263
Query: 246 VVAGG 250
            V GG
Sbjct: 264 TVDGG 268

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/251 (21%), Positives = 94/251 (37%), Gaps = 12/251 (4%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVC 68
             G++A+VT  ++GIG  IA+ L   GA V + +R  +   +   +L A G  + I    
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADL 86
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
               G +R   + Q + +                   +     S  +K+  +NV S    
Sbjct: 87  SSEAGARR---LAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSC 143
Query: 129 LQDAAPHLQKGSS------VVLISSIAGYQPQSSMAM-YGVXXXXXXXXXXXXXXEMAPD 181
           +Q   P L++ +S      V+ I S+AG       A  YG               E+  +
Sbjct: 144 IQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGE 203
Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYI 240
              VN +APG  P+    +I ++    +    +  + R G   +M             Y+
Sbjct: 204 HINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAYM 263
Query: 241 TGETLVVAGGM 251
           TG  + + GG 
Sbjct: 264 TGNVIPIDGGF 274

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 19/244 (7%)
Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
           A+VT  ++GIG  IAE L   G  V ++SR   N +EA         + +G V   ++ +
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASR---NPEEAA--------QSLGAVPLPTDLE 53
Query: 75  Q--RKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
           +   K L+ + +E  G +               +  + E     L+ +++  + LL Q A
Sbjct: 54  KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLY-LHLDVAFLLAQAA 112
Query: 133 APHLQKGS--SVVLISSIAGYQPQSSMAM--YGVXXXXXXXXXXXXXXEMAP-DTRVNCV 187
           APH+ +     V+ I S+  +     + +  Y                E A    RVN +
Sbjct: 113 APHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLL 172
Query: 188 APGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLVV 247
            PG+V T F   +  N  + + I     + R     ++             Y+TG+ + V
Sbjct: 173 CPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAV 232
Query: 248 AGGM 251
            GG 
Sbjct: 233 DGGF 236

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 97/255 (38%), Gaps = 26/255 (10%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV-- 67
           F GK  +VT   +GIG  IA+    EGA V            A+  L+  G EV   +  
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALV------------ALCDLRPEGKEVAEAIGG 51
Query: 68  ----CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVK 123
                 + + ++R   + +     G++                L  +     ++ ++N+ 
Sbjct: 52  AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSA-LTVRLPEWRRVLEVNLT 110
Query: 124 SSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP- 180
           + + L   AA  ++K  G ++V ++S+ G   +   A Y                ++AP 
Sbjct: 111 APMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPL 170
Query: 181 DTRVNCVAPGFVPTHFA-EYIT---SNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXX 236
             RVN VAPG + T    E I      +  R+  E    L RLG   ++           
Sbjct: 171 RIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEK 230
Query: 237 XXYITGETLVVAGGM 251
             +ITG  L V GGM
Sbjct: 231 ASFITGAILPVDGGM 245

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 101/256 (39%), Gaps = 17/256 (6%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           KR +GK A++T S +GIG   AE    EGA+V ++    +   +A  ++   G     V 
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQ 60
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSIL 127
             V+        I  T+E  G +               +  T+ES  +KL+ INV  ++ 
Sbjct: 61  XDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRES-YEKLFAINVAGTLF 119
Query: 128 LLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TR 183
            LQ AA       +G  ++  +S AG + ++ +A+Y                ++      
Sbjct: 120 TLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRIN 179
Query: 184 VNCVAPGFVPTH--------FAEYITSNDGVRQT-IEQNTLLNRLGTTRDMXXXXXXXXX 234
           VN +APG V           FA Y     G ++  + +     R GT  D+         
Sbjct: 180 VNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTGXAIFLAS 239
Query: 235 XXXXYITGETLVVAGG 250
               YI  +T  V GG
Sbjct: 240 AESDYIVSQTYNVDGG 255

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 103/264 (39%), Gaps = 24/264 (9%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKAR-GIEVIGVV 67
            +GKVA+VT ST GIG GIA  L  +GA +V++       +++    L A+ G++V+   
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWD----INVK 123
             +S G+  + L++  + + G+I                    E    + WD    +N+ 
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALI-----EDFPTEKWDAILALNLS 116
Query: 124 SSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           +       A PH++K     ++ I+S  G    ++ + Y                E A  
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 182 -TRVNCVAPGFVPTHFAE----YITSNDGVRQTIEQNTLLN------RLGTTRDMXXXXX 230
               N + PG+V T   E     +   +GV Q      LL+      +  T   +     
Sbjct: 177 GITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAV 236
Query: 231 XXXXXXXXYITGETLVVAGGMPSR 254
                    ITG T+ V GG  +R
Sbjct: 237 FLASDAAAQITGTTVSVDGGWTAR 260

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG 73
           VA++T +  GIG   A  L  +G +V    R +  V+E   ++   G + I +   VS+ 
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89
Query: 74  QQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDAA 133
            Q +N +   + KFG +               I   K    D+   +N++ + L L    
Sbjct: 90  LQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTV 149
Query: 134 PHLQK--GSSVVLISSIAG 150
           P+L++  G ++V++SSI G
Sbjct: 150 PYLKQRGGGAIVVVSSING 168

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 94/245 (38%), Gaps = 17/245 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F  +  +VT   +GIG  IA+RL  +G  V V+ R              +G+   GV C 
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG---------APKGL--FGVECD 61
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V++            E  G +               +  T+E   +K+ + N+  +  + 
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEK-FEKVINANLTGAFRVA 120
Query: 130 QDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNC 186
           Q A+  +Q+     ++ I S++G     + A Y                E++  +   N 
Sbjct: 121 QRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANV 180
Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLV 246
           VAPG++ T     +  ++ ++Q   Q     R+GT  ++             YI+G  + 
Sbjct: 181 VAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 238
Query: 247 VAGGM 251
           V GGM
Sbjct: 239 VDGGM 243

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 95/257 (36%), Gaps = 23/257 (8%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           + A VT  + GIG  +A  L   G +V   +R  KNV  AV  L+A G +V G  C V++
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS 84
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLW----DINVKSSILL 128
             +    +   +E+FG I                 +T + + D LW    D N+     +
Sbjct: 85  TDEVHAAVAAAVERFGPIGILVNSAGRNGGG----ETAD-LDDALWADVLDTNLTGVFRV 139
Query: 129 LQD---AAPHLQKG-SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            ++   A    + G   +V I+S  G Q     A Y                E+A     
Sbjct: 140 TREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGIT 199
Query: 184 VNCVAPGFVPTHFAEYI---------TSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXX 234
           VN V PG+V T  AE +          +   V +       L R  T  ++         
Sbjct: 200 VNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVT 259
Query: 235 XXXXYITGETLVVAGGM 251
                IT + L V GG+
Sbjct: 260 DAAASITAQALNVCGGL 276

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIG 65
           K F G+ A VT    G+G G+  +L  +G  V ++  +Q ++D+A+  L+A   G EV+G
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
           V   V++ +  K   ++   +FG +               I ++     D L  +N+   
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPV-SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGV 122
Query: 126 ILLLQDAAPHL--------QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXE 177
           +  +    P +        QKG  VV  +S+A +    S  +Y                 
Sbjct: 123 VNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYS 182
Query: 178 MAP-DTRVNCVAPGFVPTHFAEYITSNDGVR 207
           +   +  V+ + PG V +    YI ++D +R
Sbjct: 183 LLKYEIGVSVLCPGLVKS----YIYASDDIR 209

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 24/264 (9%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKAR-GIEVIGVV 67
            +GKVA+VT ST GIG GIA  L  +GA +V++       +++    L A+ G++V+   
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWD----INVK 123
             +S G+  + L++  + + G+I                    E    + WD    +N+ 
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALI-----EDFPTEKWDAILALNLS 116
Query: 124 SSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           +       A PH++K     ++ I+S  G    ++ + Y                E A  
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 182 -TRVNCVAPGFVPTHFAE----YITSNDGVRQTIEQNTLLN------RLGTTRDMXXXXX 230
               N + PG+V +   E     +   +GV Q      LL+      +  T   +     
Sbjct: 177 GITANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAV 236
Query: 231 XXXXXXXXYITGETLVVAGGMPSR 254
                    ITG T+ V GG  +R
Sbjct: 237 FLASDAAAQITGTTVSVDGGWTAR 260

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 18/255 (7%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSS--RKQKNVDEAVVKLKARGIEVIGVVCHV 70
           KVA+VT   QGIG GI+E+L  +G  + V+   ++++   E +  ++A   + + V   V
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV 62
Query: 71  SNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQ 130
           ++     + I++  EK G                 +L+  E  L +++ +NV S    +Q
Sbjct: 63  TDKANFDSAIDEAAEKLGGF-DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121
Query: 131 DAAPHLQ----KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTR-VN 185
            A+        KG  +   S  A  Q    ++ Y                E+AP    VN
Sbjct: 122 AASRKFDELGVKGKIINAASIAA-IQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180
Query: 186 CVAPGFVPTHFAEYITSN------DGVRQTIEQNT---LLNRLGTTRDMXXXXXXXXXXX 236
             APG V T   E I +         + +  ++ +    L R     D+           
Sbjct: 181 AYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASEN 240
Query: 237 XXYITGETLVVAGGM 251
             Y+TG+ ++V GGM
Sbjct: 241 SNYVTGQVMLVDGGM 255

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 104/274 (37%), Gaps = 29/274 (10%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVV-VSSRKQ-----------KNVDEAV 53
           MA + +GKVA +T + +G G   A  L  EGA ++ +   KQ            ++ E V
Sbjct: 22  MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETV 81
Query: 54  VKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESV 113
            +++A G  +I     V +    +  ++  + + G++               + +     
Sbjct: 82  RQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKT 141
Query: 114 LDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXX 170
              + D+N+  + +  + A PH+   ++G S+V  SSI G +   ++  Y          
Sbjct: 142 WRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGL 201
Query: 171 XXXXXXEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTR------ 223
                 E+ P + RVN V P  V T       +    R  +E  T+ +    +R      
Sbjct: 202 MRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP 261
Query: 224 -------DMXXXXXXXXXXXXXYITGETLVVAGG 250
                  D+             YITG +L V GG
Sbjct: 262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 102/264 (38%), Gaps = 24/264 (9%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKAR-GIEVIGVV 67
            +GKVA+VT ST GIG GIA  L  +GA +V++       +++    L A+ G++V+   
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 68  CHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWD----INVK 123
             +S G+  + L++  + + G+I                    E    + WD    +N+ 
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALI-----EDFPTEKWDAILALNLS 116
Query: 124 SSILLLQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD 181
           +       A PH++K     ++ I+S  G    ++ + Y                E A  
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 182 -TRVNCVAPGFVPTHFAE----YITSNDGVRQTIEQNTLLN------RLGTTRDMXXXXX 230
               N + PG+V     E     +   +GV Q      LL+      +  T   +     
Sbjct: 177 GITANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAV 236
Query: 231 XXXXXXXXYITGETLVVAGGMPSR 254
                    ITG T+ V GG  +R
Sbjct: 237 FLASDAAAQITGTTVSVDGGWTAR 260

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 100/254 (39%), Gaps = 12/254 (4%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVI 64
           M    + KV ++T  + G+G  +A R G E A VV++    ++   +A  +++  G + I
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAI 68
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDIN 121
            V   V+  +   NL+   I++FG +                + + E  LD   K+ D N
Sbjct: 69  IVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENP----VPSHELSLDNWNKVIDTN 124
Query: 122 VKSSILLLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEM 178
           +  + L  ++A  +  +     +V+ +SS+    P      Y                E 
Sbjct: 125 LTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEY 184
Query: 179 APD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXX 237
           AP   RVN + PG + T       ++   R  +E    +  +G   ++            
Sbjct: 185 APKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQA 244
Query: 238 XYITGETLVVAGGM 251
            Y+TG TL   GGM
Sbjct: 245 SYVTGITLFADGGM 258

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 96/252 (38%), Gaps = 6/252 (2%)
Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
            M   FQ +  +VT    GIG G+A  L   GASV++  R    +  AV +L+A G    
Sbjct: 4   SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGG 63
Query: 65  GV---VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDIN 121
            +      ++N  +    ++      G++               I Q       +  D+N
Sbjct: 64  AIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLN 123
Query: 122 VKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEM- 178
           V  ++ +L+ AA  + +  G S V ISSIA          YGV              E+ 
Sbjct: 124 VNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELG 183
Query: 179 APDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXX 238
           A   RVN + PG + T     IT +  +       T L R G   D+             
Sbjct: 184 ASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAAS 243
Query: 239 YITGETLVVAGG 250
           ++TG+ + V GG
Sbjct: 244 FVTGQVINVDGG 255

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 8/243 (3%)
Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           V +VT +++GIG  IA  LG  G  V+V+ +R  K  +E   +++A G + I     VS 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62
Query: 73  GQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDA 132
               + ++   I+ +G I               +++ K+S  D++ D+N+    L  Q A
Sbjct: 63  EADVEAMMKTAIDAWGTI-DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121
Query: 133 APHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAP 189
              + K     ++ I+S+ G       A Y                E A  +  VN V P
Sbjct: 122 TKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCP 181
Query: 190 GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXX-XXXYITGETLVVA 248
           GF+ +     +  +  + + I     L R G   ++              YITG+   + 
Sbjct: 182 GFIASDMTAKLGED--MEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTID 239
Query: 249 GGM 251
           GG+
Sbjct: 240 GGI 242

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 100/254 (39%), Gaps = 12/254 (4%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVI 64
           M    + KV ++T  + G+G  +A R G E A VV++    ++   +A  +++  G + I
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAI 68
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDIN 121
            V   V+  +   NL+   I++FG +                + + E  LD   K+ D N
Sbjct: 69  IVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENP----VPSHELSLDNWNKVIDTN 124
Query: 122 VKSSILLLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEM 178
           +  + L  ++A  +  +     +V+ +SS+    P      Y                E 
Sbjct: 125 LTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEY 184
Query: 179 APD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXX 237
           AP   RVN + PG + T       ++   R  +E    +  +G   ++            
Sbjct: 185 APKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQA 244
Query: 238 XYITGETLVVAGGM 251
            Y+TG TL   GGM
Sbjct: 245 SYVTGITLFADGGM 258

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 100/254 (39%), Gaps = 12/254 (4%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVI 64
           M    + KV ++T  + G+G  +A R G E A VV++    ++   +A  +++  G + I
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAI 68
Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDIN 121
            V   V+  +   NL+   I++FG +                + + E  LD   K+ D N
Sbjct: 69  IVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENP----VPSHELSLDNWNKVIDTN 124
Query: 122 VKSSILLLQDAAPHLQKGS---SVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEM 178
           +  + L  ++A  +  +     +V+ +SS+    P      Y                E 
Sbjct: 125 LTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEY 184
Query: 179 APD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXX 237
           AP   RVN + PG + T       ++   R  +E    +  +G   ++            
Sbjct: 185 APKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQA 244
Query: 238 XYITGETLVVAGGM 251
            Y+TG TL   GGM
Sbjct: 245 SYVTGITLFADGGM 258

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 38/259 (14%)
Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M++  R +G   +V A+++GIG  +A+ L  EGA V + +R ++        LK  G   
Sbjct: 13  MELGIRDKG--VLVLAASRGIGRAVADVLSQEGAEVTICARNEE-------LLKRSGHRY 63
Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVK 123
             VVC +     RK+L +   EK  ++                   K    D+L + + K
Sbjct: 64  --VVCDL-----RKDL-DLLFEKVKEVDILVLNAGG---------PKAGFFDELTNEDFK 106
Query: 124 SSI--------LLLQDAAPHL-QKG-SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXX 173
            +I         ++++  P + +KG   +V I+S +   P  ++                
Sbjct: 107 EAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKT 166
Query: 174 XXXEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXX 232
              E+AP    VNCVAPG+  T   + + S +  +Q +E    + R+    ++       
Sbjct: 167 LSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQ-VESQIPMRRMAKPEEIASVVAFL 225
Query: 233 XXXXXXYITGETLVVAGGM 251
                 Y+TG+T+VV GG+
Sbjct: 226 CSEKASYLTGQTIVVDGGL 244

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 5/195 (2%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           RF  +V ++T    G+G   A RL  EGA  S+V  S +     +A V   A   EV+  
Sbjct: 10  RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 69
Query: 67  VCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
           V  VS+  Q +  +  T E+FG+I                     +  DK+  IN++   
Sbjct: 70  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 129
Query: 127 LLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
           L L+     +++  S  VV  +S+ G +   + + Y                E      R
Sbjct: 130 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 189
Query: 184 VNCVAPGFVPTHFAE 198
           +N +APG + T   E
Sbjct: 190 INAIAPGAIWTPMVE 204

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 97/262 (37%), Gaps = 27/262 (10%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M    + KV IVT ++ GIG  IAER   EG+ V+  S           + K   IE   
Sbjct: 9   MFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIE--- 59
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
             C V+N  Q K  I+   +++G I               I         ++ D+N+   
Sbjct: 60  --CDVTNPDQVKASIDHIFKEYGSI-SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGY 116
Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTR 183
               + A P++   +  S+V ISS+       + + Y                + AP  R
Sbjct: 117 YYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLR 176
Query: 184 VNCVAPGFVPTHF----AEYITSNDGVRQTIEQNT-------LLNRLGTTRDMXXXXXXX 232
            N V P  + T      AE    +D +R  IE+          + R+G  +++       
Sbjct: 177 CNAVCPATIDTPLVRKAAELEVGSDPMR--IEKKISEWGHEHPMQRIGKPQEVASAVAFL 234
Query: 233 XXXXXXYITGETLVVAGGMPSR 254
                 +ITG  L V GG+  R
Sbjct: 235 ASREASFITGTCLYVDGGLSIR 256

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 94/245 (38%), Gaps = 17/245 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F  +  +VT   +GIG  IA+RL  +G  V V+ R              +G+   GV   
Sbjct: 33  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG---------APKGL--FGVEVD 81
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V++            E  G +               +  T+E   +K+ + N+  +  + 
Sbjct: 82  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEK-FEKVINANLTGAFRVA 140
Query: 130 QDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNC 186
           Q A+  +Q+     ++ I+S++G     + A Y                E++  +   N 
Sbjct: 141 QRASRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANV 200
Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLV 246
           VAPG++ T     +  ++ ++Q   Q     R+GT  ++             YI+G  + 
Sbjct: 201 VAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 258
Query: 247 VAGGM 251
           V GGM
Sbjct: 259 VDGGM 263

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK  IVT +++GIG  +A  L   GA VV+++R +    E + K+ +R +E+     H
Sbjct: 16  LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSE----EGLQKVVSRCLELGAASAH 71
Query: 70  -VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD-------KLWDIN 121
            ++   +      Q I K GK+               I QT  S+         ++ ++N
Sbjct: 72  YIAGTMEDMTFAEQFIVKAGKL----MGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVN 127
Query: 122 VKSSILLLQDAAPHL-QKGSSVVLISSIAGYQPQSSMAMY 160
             S +++   A P L Q   S+ +ISS+AG   Q  +A Y
Sbjct: 128 FLSYVVMSTAALPMLKQSNGSIAVISSLAGKMTQPMIAPY 167

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 93/245 (37%), Gaps = 17/245 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F  +  +VT   +GIG  IA+RL  +G  V V+ R              +G+   GV   
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG---------APKGL--FGVEVD 61
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V++            E  G +               +  T+E   +K+ + N+  +  + 
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEK-FEKVINANLTGAFRVA 120
Query: 130 QDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNC 186
           Q A+  +Q+     ++ I S++G     + A Y                E++  +   N 
Sbjct: 121 QRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANV 180
Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLV 246
           VAPG++ T     +  ++ ++Q   Q     R+GT  ++             YI+G  + 
Sbjct: 181 VAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 238
Query: 247 VAGGM 251
           V GGM
Sbjct: 239 VDGGM 243

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 96/258 (37%), Gaps = 27/258 (10%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            + KV IVT ++ GIG  IAER   EG+ V+  S           + K   IE     C 
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIE-----CD 54
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           V+N  Q K  I+   +++G I               I         ++ D+N+       
Sbjct: 55  VTNPDQVKASIDHIFKEYGSI-SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYAS 113
Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCV 187
           + A P++   +  S+V ISS+       + + Y                + AP  R N V
Sbjct: 114 KFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAV 173
Query: 188 APGFVPTHF----AEYITSNDGVRQTIEQNT-------LLNRLGTTRDMXXXXXXXXXXX 236
            P  + T      AE    +D +R  IE+          + R+G  +++           
Sbjct: 174 CPATIDTPLVRKAAELEVGSDPMR--IEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE 231
Query: 237 XXYITGETLVVAGGMPSR 254
             +ITG  L V GG+  R
Sbjct: 232 ASFITGTCLYVDGGLSIR 249

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/247 (20%), Positives = 101/247 (40%), Gaps = 9/247 (3%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           +  G+ A+VT +T GIG  IA     +GA V +   ++  + E    L   G +V     
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSA 80
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
           ++S+ +  K L  +  E+  +                 ++ ++   D +  +N+ ++  L
Sbjct: 81  NLSDRKSIKQLA-EVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTL 139
Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
            ++    +  ++   ++ I+SI G         Y                E+A  +  VN
Sbjct: 140 TRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVN 199
Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETL 245
           C+APGF+ +   + +  N+  ++ I     + R+G   ++             Y+TG+TL
Sbjct: 200 CIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTL 257
Query: 246 VVAGGMP 252
            + GGM 
Sbjct: 258 HINGGMA 264

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/215 (20%), Positives = 84/215 (39%), Gaps = 20/215 (9%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV------------SSRKQKNVDEAV 53
           M  R  GKVA ++ + +G G   A RL  EGA ++                  +++ E  
Sbjct: 9   MTGRVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETA 68
Query: 54  VKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESV 113
             +K     ++     V + +  K+ ++  +E+ G++               + + +++V
Sbjct: 69  DLVKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNV 128
Query: 114 LDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXX 170
              + DIN+      ++   PH+    +G S+VL SS+ G +   +   Y          
Sbjct: 129 WQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGL 188
Query: 171 XXXXXXEMAPD-TRVNCVAPGFVPTHFAEYITSND 204
                 E+ P   RVN V    +PT  +  +  ND
Sbjct: 189 MRAFAVELGPHMIRVNAV----LPTQVSTTMVMND 219

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/174 (20%), Positives = 69/174 (39%), Gaps = 19/174 (10%)
Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVV----------------VSSRKQKNV 49
           M  R +GKVA VT + +G G   A RL  EGA ++                + +   +++
Sbjct: 5   MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDL 64
Query: 50  DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQT 109
            E    +K     ++     V +    K  ++  +E+ G++               + +T
Sbjct: 65  AETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKT 124
Query: 110 KESVLDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMY 160
            E    ++ DIN+      ++   PH+    +G S++L SS+ G +       Y
Sbjct: 125 SEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHY 178

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 95/247 (38%), Gaps = 23/247 (9%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           + G+  +VT  + GIG  IA +    GA VV                 A G++  GV   
Sbjct: 9   YAGQQVLVTGGSSGIGAAIAMQFAELGAEVV-----------------ALGLDADGVHAP 51
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKE----SVLDKLWDINVKSS 125
                +R+ L     ++  ++               I + +E    +  +++  +N+ ++
Sbjct: 52  RHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAA 111
Query: 126 ILLLQDAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TR 183
           +L  Q A P L Q+G S++ I+S+      +    Y                E A +  R
Sbjct: 112 MLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIR 171
Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGE 243
           VN +APG++ T     + ++    + I Q T L R G   ++             ++TG 
Sbjct: 172 VNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGA 231
Query: 244 TLVVAGG 250
            L V GG
Sbjct: 232 VLAVDGG 238

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 80/197 (40%), Gaps = 7/197 (3%)
Query: 12  GKVAIVTASTQGIGFGIAERL-GLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCH 69
           GKV +VT  ++GIG  I + L  L+  +VV    +    +  + KLK + G     VV  
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS---EAPLKKLKEKYGDRFFYVVGD 58
Query: 70  VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLL 129
           ++     K L+N  ++  GKI               + +   +   KL+DIN  S + L+
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118
Query: 130 QDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVA 188
             A P L+K   +VV +SS A     SS   YG               E     +   VA
Sbjct: 119 GIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-ERQVKAIAVA 177
Query: 189 PGFVPTHFAEYITSNDG 205
           PG V T     I  N G
Sbjct: 178 PGIVDTDMQVNIRENVG 194

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-------NVDEAVVKLKARGI 61
           R  G    +T +++GIG  IA +   +GA++V++++  +        +  A  +++A G 
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101
Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDIN 121
           + +  +  V + QQ    + + I+KFG I                L T    LD + ++N
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNT-LDTPTKRLDLMMNVN 160
Query: 122 VKSSILLLQDAAPHLQK 138
            + + L  +   P+L+K
Sbjct: 161 TRGTYLASKACIPYLKK 177

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 86/243 (35%), Gaps = 6/243 (2%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE-AVVKLKARGIEVIGVVCHVS 71
           +VAIVT ++ G G  IA R    G  V       + ++E A     A   +V+ V   V+
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 72  NGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXX-ILQTKE-SVLDKLWDINVKSSILLL 129
           +       I  T+E+FG I                +L T      DK+  +NV+   L  
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 130 QDAAPH--LQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNC 186
           +   PH  LQ    +V I+S+A        + Y                + A    R N 
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182
Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLV 246
           V PG + T   ++      +R  +        +GT   +             Y+ G  LV
Sbjct: 183 VCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALV 242
Query: 247 VAG 249
           + G
Sbjct: 243 MDG 245

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 25/210 (11%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS--RKQKNVD----------EAVVK 55
            R QGKVA +T + +G G   A RL  +GA +V     R+Q N+D          E V  
Sbjct: 42  NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRL 101
Query: 56  LKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD 115
           ++ +G  +I     V +    + ++++ + +FG I               +     S+ D
Sbjct: 102 VEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVV-----SLTD 156
Query: 116 KLWDINVKSSILLLQDAA----PHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXX 168
           + W   ++++++    A     P +    +G SV+ +SS  G +     + Y        
Sbjct: 157 QQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQ 216
Query: 169 XXXXXXXXEMA-PDTRVNCVAPGFVPTHFA 197
                   E+   + RVN V PG V T  A
Sbjct: 217 GLMLSLANEVGRHNIRVNSVNPGAVNTEMA 246

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK  IVT +++GIG  IA  L   GA VVV++R +    EA+ K+ AR +E+     H
Sbjct: 30  LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSK----EALQKVVARCLELGAASAH 85
Query: 70  -VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDINVKSS 125
            ++   +      + + + G +                L      +D   K  ++N  S 
Sbjct: 86  YIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSF 145
Query: 126 ILLLQDAAPHL-QKGSSVVLISSIAG 150
           ++L   A P L Q   S+ ++SS+AG
Sbjct: 146 VVLSVAAMPMLMQSQGSIAVVSSVAG 171

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 26/249 (10%)
Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R Q KV ++T ++QGIG G+          VV +SR  K   +          ++  V  
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---------DIHTVAG 75
Query: 69  HVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
            +S  +    ++ + IE+FG+I               +  T+E   D    +NV     +
Sbjct: 76  DISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEXTQED-YDHNLGVNVAGFFHI 134
Query: 129 LQDAAPH-LQKGSS-VVLISSIAGYQPQ--SSMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            Q AA   L++GS  +V I++    QP      A+  +              E +    R
Sbjct: 135 TQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVR 194
Query: 184 VNCVAPGFV--PTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYIT 241
           VN V+PG +  P H AE  ++  G+         + R G  RD+             +IT
Sbjct: 195 VNAVSPGVIKTPXHPAETHSTLAGLHP-------VGRXGEIRDV--VDAVLYLEHAGFIT 245
Query: 242 GETLVVAGG 250
           GE L V GG
Sbjct: 246 GEILHVDGG 254

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK  IVT +++GIG  IA  L   GA VVV++R +    EA+ K+ AR +E+     H
Sbjct: 7   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSK----EALQKVVARCLELGAASAH 62
Query: 70  -VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDINVKSS 125
            ++   +      + + + G +                L      +D   K  ++N  S 
Sbjct: 63  YIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSF 122
Query: 126 ILLLQDAAPHL-QKGSSVVLISSIAG 150
           ++L   A P L Q   S+ ++SS+AG
Sbjct: 123 VVLSVAAMPMLMQSQGSIAVVSSVAG 148

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK  IVT +++GIG  IA  L   GA VVV++R +    EA+ K+ AR +E+     H
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSK----EALQKVVARCLELGAASAH 64
Query: 70  -VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDINVKSS 125
            ++   +      + + + G +                L      +D   K  ++N  S 
Sbjct: 65  YIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSF 124
Query: 126 ILLLQDAAPHL-QKGSSVVLISSIAG 150
           ++L   A P L Q   S+ ++SS+AG
Sbjct: 125 VVLSVAAMPMLMQSQGSIAVVSSVAG 150

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK  IVT +++GIG  IA  L   GA VVV++R +    EA+ K+ AR +E+     H
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSK----EALQKVVARCLELGAASAH 64
Query: 70  -VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD---KLWDINVKSS 125
            ++   +      + + + G +                L      +D   K  ++N  S 
Sbjct: 65  YIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSMEVNFHSF 124
Query: 126 ILLLQDAAPHL-QKGSSVVLISSIAG 150
           ++L   A P L Q   S+ ++SS+AG
Sbjct: 125 VVLSVAAMPMLMQSQGSIAVVSSVAG 150

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK  IVT +++GIG  +A  L   GA VV+++R +    E + K+ +R +E+     H
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSE----EGLQKVVSRCLELGAASAH 62
Query: 70  -VSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLD-------KLWDIN 121
            ++   +      Q I K GK+               I QT  S+         ++ ++N
Sbjct: 63  YIAGTMEDMTFAEQFIVKAGKL----MGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVN 118
Query: 122 VKSSILLLQDAAPHL-QKGSSVVLISSIAG 150
             S +++   A P L Q   S+ +ISS+AG
Sbjct: 119 FLSYVVMSTAALPMLKQSNGSIAVISSLAG 148

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 85/239 (35%), Gaps = 17/239 (7%)
Query: 16  IVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ 75
           +VT   +GIG  IA      G  V ++ R  +  +             + V C +++ +Q
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-----------FLAVKCDITDTEQ 73
Query: 76  RKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILLLQDAAPH 135
            +    +  E  G +               +++  E     + + N+  +  +++ A   
Sbjct: 74  VEQAYKEIEETHGPVEVLIANAGVTKDQL-LMRMSEEDFTSVVETNLTGTFRVVKRANRA 132
Query: 136 L--QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFV 192
           +   K   VVLISS+ G    +  A Y                E+   +   N VAPGFV
Sbjct: 133 MLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFV 192
Query: 193 PTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLVVAGGM 251
            T   + +T  D  R  I     L R     ++             YITG  + V GG+
Sbjct: 193 DTDMTKVLT--DEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGL 249

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 18/256 (7%)
Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            QGK+A+VTA + G+GF  A  L   GA +++ SR ++ ++ A  ++ +    V G    
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASL---VSGAQVD 61
Query: 70  VSNGQQRK-NLINQTIEKFGKI--XXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSI 126
           +  G  R+   I++  EK   +                  ++      D+ + +  +S++
Sbjct: 62  IVAGDIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAV 121
Query: 127 LLLQDAAPHL-QKG-SSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPD-TR 183
            + + AA  + +KG   +V I S+   +P   +A+  +              E+AP    
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181
Query: 184 VNCVAPGFVPTH----FAEYITSNDGVR-----QTIEQNTLLNRLGTTRDMXXXXXXXXX 234
           VN V P  + T      AE      G+      +++     + R+G   ++         
Sbjct: 182 VNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLAS 241
Query: 235 XXXXYITGETLVVAGG 250
               +ITG  + V GG
Sbjct: 242 EKASFITGAVIPVDGG 257

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/208 (20%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE--VIG 65
           +R++ ++A+VT ++ GIG  +A  L  +G  VV  +R   N++E   + K+ G    +I 
Sbjct: 28  ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP 87
Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLDKLWDINVKSS 125
             C +SN +   ++ +    +   +               +L    S    ++++NV + 
Sbjct: 88  YRCDLSNEEDILSMFSAIRSQHSGV-DICINNAGLARPDTLLSGSTSGWKDMFNVNVLAL 146
Query: 126 ILLLQDAAPHLQK----GSSVVLISSIAGYQ--PQSSMAMYGVXXXXXXXXXXXXXXEM- 178
            +  ++A   +++       ++ I+S++G++  P S    Y                E+ 
Sbjct: 147 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 206
Query: 179 --APDTRVNCVAPGFVPTHFAEYITSND 204
                 R  C++PG V T FA  +   D
Sbjct: 207 EAQTHIRATCISPGVVETQFAFKLHDKD 234

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 142 VVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVAPGFVPTHFAEYIT 201
           ++ I+S   +Q +     Y                 + PD  VNC+APG++     +  T
Sbjct: 128 IINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFT 187
Query: 202 SNDGVRQTIEQNTLLNRLGTTRDMXXXXXXXXXXXXXYITGETLVVAGGMPSRL 255
             D             ++GT +D+             +ITGET++V GGM  R+
Sbjct: 188 QEDCAA------IPAGKVGTPKDI--SNMVLFLCQQDFITGETIIVDGGMSKRM 233

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 89/246 (36%), Gaps = 12/246 (4%)
Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-ARGIEVIGVVCHVS 71
           KVA +T    GIGF IAE     G   V++SR    V  A  KL  A G   + +   V 
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR 87
Query: 72  NGQQRKNLINQTIEKFGKIX---XXXXXXXXXXXXXXILQTKESVLDKLWDINVKSSILL 128
                   ++Q +++FG+I                       ++V+D         S +L
Sbjct: 88  APPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVL 147
Query: 129 LQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCV 187
            +        G  +V I++  G + Q+     G               E  P + RVN +
Sbjct: 148 YEKF--FRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSL 205
Query: 188 APGFVPTHFAEYITSNDGVRQTIEQN---TLLNRLGTTRDMXXXXXXXXXXXXXYITGET 244
           APG  P    E +    G + ++      + L RLG   ++             Y+TG  
Sbjct: 206 APG--PISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAV 263
Query: 245 LVVAGG 250
           LV  GG
Sbjct: 264 LVADGG 269

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 18/209 (8%)
Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEG-------------ASVVVSSRKQKNVDEAV 53
           A   QG+VA +T + +G G   A RL  EG             ASV  +    +++DE  
Sbjct: 10  AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETA 69
Query: 54  VKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESV 113
             ++ +G + +  V  V +    + L+   +E+FG++                  T E  
Sbjct: 70  RLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQ- 128
Query: 114 LDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXX 170
            D +  +N+  +   L+   P +     G S+V++SS AG +       Y          
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTAL 188
Query: 171 XXXXXXEMAP-DTRVNCVAPGFVPTHFAE 198
                 E+     RVN + P  V T   E
Sbjct: 189 TNTLAIELGEYGIRVNSIHPYSVETPMIE 217

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	255
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-116
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	6e-86
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-84
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	4e-84
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-83
1xq1_A	266	Putative tropinone reducatse; structural genomics,	7e-81
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-80
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	2e-80
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-78
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	3e-76
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	5e-76
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-74
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-74
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-74
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-74
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-74
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-74
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	4e-74
3imf_A	257	Short chain dehydrogenase; structural genomics, in	7e-74
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-73
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-73
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	4e-73
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	5e-73
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-72
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-72
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-72
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-72
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-72
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	6e-72
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-71
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-71
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	5e-71
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-70
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-70
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	4e-70
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	6e-70
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	7e-70
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	7e-70
4dqx_A	277	Probable oxidoreductase protein; structural genomi	8e-70
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-69
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-69
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-69
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-69
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-69
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-69
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-68
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-68
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-68
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	4e-68
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-68
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	4e-68
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	6e-68
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	6e-68
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	8e-68
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	8e-68
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-67
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-67
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-67
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	3e-67
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-67
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-67
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	3e-67
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	5e-67
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	7e-67
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-66
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	3e-66
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	4e-66
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	5e-66
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-65
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-65
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-65
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	3e-65
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	3e-65
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	4e-65
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	6e-65
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-64
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-64
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	3e-64
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-64
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	4e-64
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-63
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	3e-63
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	6e-63
3rih_A	293	Short chain dehydrogenase or reductase; structural	8e-63
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	9e-63
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	1e-62
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-62
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-62
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	4e-62
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-61
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-61
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	6e-61
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	6e-61
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	8e-61
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-60
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-60
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-60
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	3e-60
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-60
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	4e-60
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	4e-60
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	4e-60
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	5e-60
3cxt_A	291	Dehydrogenase with different specificities; rossma	5e-60
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	8e-60
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-59
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-59
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-59
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-59
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	5e-59
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	6e-59
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	6e-59
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-58
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-58
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	4e-58
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	8e-58
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-57
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-57
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	5e-57
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	8e-57
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-56
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-56
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-56
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-56
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-56
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	4e-56
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	7e-56
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	8e-56
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-55
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-55
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-55
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-55
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	3e-55
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	8e-55
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	5e-54
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	5e-54
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-53
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	3e-53
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	3e-53
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-52
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-52
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	3e-52
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-52
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	7e-52
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-51
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-51
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	7e-51
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-50
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	9e-50
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	3e-48
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	4e-48
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	8e-48
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-47
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-45
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	3e-43
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	9e-43
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	4e-41
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	4e-39
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	2e-38
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	5e-38
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	6e-38
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-36
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	7e-36
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	1e-35
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-35
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-35
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-31
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	3e-35
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-34
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-33
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	8e-33
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-32
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-32
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	2e-32
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	8e-31
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	4e-30
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	6e-30
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-28
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-27
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	3e-27
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	7e-27
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	7e-27
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	2e-26
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-26
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	4e-26
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	5e-26
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	7e-26
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	7e-26
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	8e-26
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	9e-26
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-25
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	4e-25
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-24
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-24
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	8e-24
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	5e-23
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	3e-22
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	3e-20
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	4e-19
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	6e-19
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	5e-16
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	8e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-06
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	2e-05
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	4e-05
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	4e-04
1a8q_A	274	Bromoperoxidase A1; haloperoxidase, oxidoreductase	5e-04
1zoi_A	276	Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo	6e-04

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  332 bits (855), Expect = e-116
 Identities = 115/257 (44%), Positives = 166/257 (64%), Gaps = 3/257 (1%)

Query: 2   EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
             ++  K  + KVA+VTAST GIG  IA RL  +GA VVVSSRKQ+NVD  V  L+  G+
Sbjct: 4   TGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL 63

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
            V G VCHV   + R+ L+   +   G +D++VSNAA NP   +I+   E V DK+  +N
Sbjct: 64  SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVN 123

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           VK+++L+ +   P +  + G SV+++SS+  Y P  ++  Y V+KTALLGLTK LA E+A
Sbjct: 124 VKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELA 183

Query: 180 PD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
           P   RVNC+APG + T+F++ +  +   ++ ++++  + RLG   D A   +FL S+DAS
Sbjct: 184 PRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDAS 243

Query: 239 YITGETLVVAGGMPSRL 255
           YITGET+VV GG  SRL
Sbjct: 244 YITGETVVVGGGTASRL 260

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  255 bits (655), Expect = 6e-86
 Identities = 81/261 (31%), Positives = 129/261 (49%), Gaps = 11/261 (4%)

Query: 1   MEKMKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
           M       R+  +G  A+VT  ++GIG+ I E L   GA V   SR +K +DE +   + 
Sbjct: 8   MMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE 67

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKF-GKIDVVVSNAAANPSVDSILQTKESVLDKL 117
           +G+ V G VC + +  +R  L+      F GK++++V+NA      +      E   + +
Sbjct: 68  KGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKE-AKDFTEKDYNII 126

Query: 118 WDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
              N +++  L Q A P L   +  +V+ +SSIAG+    S+++Y  +K A+  +TK+LA
Sbjct: 127 MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLA 186

Query: 176 AEMAPDT-RVNCVAPGFVPTHFAEYITSNDG----VRQTIEQNTLLNRLGTTRDMAAAAA 230
            E A D  RVN VAPG + T   E     +             T + R G  ++++A  A
Sbjct: 187 CEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIA 246

Query: 231 FLASDDASYITGETLVVAGGM 251
           FL    ASYITG+ +   GG 
Sbjct: 247 FLCFPAASYITGQIIWADGGF 267

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  252 bits (646), Expect = 1e-84
 Identities = 68/257 (26%), Positives = 130/257 (50%), Gaps = 11/257 (4%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M      KV +++     +G  +A R   +GA +V+++R  + +++   ++   G   + 
Sbjct: 5   MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALS 64

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   +++  Q  +L+++T++ +G++DVV++NA   PS+     T    +    ++ V  +
Sbjct: 65  VGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGA 124

Query: 126 ILLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-R 183
           + L+Q   P L++   +VV ++S+     Q+    Y + K+ALL +++ LA E+     R
Sbjct: 125 LRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIR 184

Query: 184 VNCVAPGFVPTHFAE---------YITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
           VN V PG++     +         Y TS + +       + L RL T  ++A+A  F+AS
Sbjct: 185 VNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMAS 244

Query: 235 DDASYITGETLVVAGGM 251
           D AS ITG+ L V  G 
Sbjct: 245 DLASGITGQALDVNCGE 261

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  250 bits (642), Expect = 4e-84
 Identities = 85/255 (33%), Positives = 136/255 (53%), Gaps = 10/255 (3%)

Query: 6   MAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           MA R+  +G  A+VT  ++GIG+GI E L   GASV   SR QK +++ + + +++G +V
Sbjct: 1   MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKF-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
              VC +S+  +R+ L+N     F GK++++V+NA      +            +  IN 
Sbjct: 61  EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKE-AKDYTVEDYSLIMSINF 119

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           +++  L   A P L   +  +VV ISS++G       A+YG TK A+  LT+ LA E A 
Sbjct: 120 EAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAK 179

Query: 181 DT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQ---NTLLNRLGTTRDMAAAAAFLASDD 236
           D  RVN V PG + T   E    +   ++ + +      L R+G  +++AA  AFL    
Sbjct: 180 DNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA 239

Query: 237 ASYITGETLVVAGGM 251
           ASY+TG+ + V GG+
Sbjct: 240 ASYVTGQIIYVDGGL 254

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  249 bits (639), Expect = 3e-83
 Identities = 77/255 (30%), Positives = 116/255 (45%), Gaps = 6/255 (2%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA---R 59
              M   FQ +  +VT    GIG G+A  L   GASV++  R    +  AV +L+A    
Sbjct: 2   PGSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGAN 61

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G  +      ++N  +    ++      G++  VV  A  + ++  I Q       +  D
Sbjct: 62  GGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVD 121

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +NV  ++ +L+ AA  +    G S V ISSIA          YGVTK+A+  L +  A E
Sbjct: 122 LNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADE 181

Query: 178 MAPDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
           +     RVN + PG + T     IT +  +       T L R G   D+A  A FL SD 
Sbjct: 182 LGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDA 241

Query: 237 ASYITGETLVVAGGM 251
           AS++TG+ + V GG 
Sbjct: 242 ASFVTGQVINVDGGQ 256

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  242 bits (621), Expect = 7e-81
 Identities = 81/257 (31%), Positives = 128/257 (49%), Gaps = 8/257 (3%)

Query: 1   MEKMKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
           M   + ++R+  + K  +VT  T+GIG  I E     GA +   +R +  ++E + K + 
Sbjct: 1   MAGAEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK 60

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFG-KIDVVVSNAAANPSVDSILQTKESVLDKL 117
           +G +V G VC  S   +R+ L+      FG K+D++++N  A  S    L          
Sbjct: 61  KGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKP-TLDYTAEDFSFH 119

Query: 118 WDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
              N++S+  L Q A P L      +++ +SSIAG    S  ++Y  TK AL  L + LA
Sbjct: 120 ISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 179

Query: 176 AEMAPDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
            E A D  R N VAP  + T  AE +  +D  ++ +     L R G   ++++  AFL  
Sbjct: 180 CEWASDGIRANAVAPAVIATPLAEAV-YDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM 238

Query: 235 DDASYITGETLVVAGGM 251
             ASYITG+T+ V GG+
Sbjct: 239 PAASYITGQTICVDGGL 255

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  242 bits (620), Expect = 1e-80
 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 10/257 (3%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           +    M +R   K+A++T +T GIG   A+R   EGA V ++ R++  +D A+ ++   G
Sbjct: 18  LYFQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G 74

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
              +G+    +N  +   L  +   + G+IDV+  NA     +  + +  E   D  +D 
Sbjct: 75  GGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSML-PLGEVTEEQYDDTFDR 133

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           NVK  +  +Q A P L +GSSVVL  S AG     + ++Y  +K AL    +    ++  
Sbjct: 134 NVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKD 193

Query: 181 DT-RVNCVAPGFVPT-----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
              R+N ++PG   T        +      G+   +     + R+G   ++AAAA FLAS
Sbjct: 194 RGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLAS 253

Query: 235 DDASYITGETLVVAGGM 251
           DD+S++TG  L V GG 
Sbjct: 254 DDSSFVTGAELFVDGGS 270

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  241 bits (617), Expect = 2e-80
 Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 10/258 (3%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
            + +    R  GK AI+T +  GIG  IA      GASVVVS       +  V +++  G
Sbjct: 4   SDNL----RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG 59

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            +     C +++ Q+   L +  I K GK+D++V+NA              +   + +++
Sbjct: 60  GQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG--PKPFDMPMADFRRAYEL 117

Query: 121 NVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           NV S   L Q  AP +    G  ++ I+S+A      +M  Y  +K A   L + +A ++
Sbjct: 118 NVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDL 177

Query: 179 APDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
                RVN +APG + T   + +     + Q + Q+T + RLG  +D+A AA FL S  A
Sbjct: 178 GEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAA 236

Query: 238 SYITGETLVVAGGMPSRL 255
           S+++G+ L V+GG    L
Sbjct: 237 SWVSGQILTVSGGGVQEL 254

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  236 bits (605), Expect = 2e-78
 Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 17/262 (6%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIE 62
           M M     GKVA++T S+ GIG  IAE    EGA +V+ +R+   + EA   LK + G+ 
Sbjct: 1   MDM--GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR 58

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V+ V   V+  +    ++      FG  D++V+NA      ++I++  +      W++ V
Sbjct: 59  VLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGS-NETIMEAADEKWQFYWELLV 117

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            +++ L +   P +  + G +++  +SI   QP     +Y VTK AL+  +K LA E+  
Sbjct: 118 MAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIK 177

Query: 181 DT-RVNCVAPGFVPT----------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA 229
           D  RVNC+ PG + T                     ++   +++  + R  +  ++A   
Sbjct: 178 DNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFF 237

Query: 230 AFLASDDASYITGETLVVAGGM 251
            FL S+ A+Y  G    V GGM
Sbjct: 238 VFLCSERATYSVGSAYFVDGGM 259

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  230 bits (590), Expect = 3e-76
 Identities = 84/246 (34%), Positives = 133/246 (54%), Gaps = 6/246 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
                VAIVT +  GIG  IA      GASVVV+  K +  +     ++  G + IG+ C
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC 68

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
           +V++ Q R+ +I   +++FGKI V+V+NA              S  +  + +N+ S   L
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAGGGG--PKPFDMPMSDFEWAFKLNLFSLFRL 126

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            Q AAPH+    G +++ ISS+AG      MA YG +K A+  LT+ +A ++ P   RVN
Sbjct: 127 SQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVN 186

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
            +APG + T     + +   + + + ++T L RLG  +D+A AA FL S  A++I+G+ L
Sbjct: 187 AIAPGAIKTDALATVLT-PEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVL 245

Query: 246 VVAGGM 251
            V+GG 
Sbjct: 246 TVSGGG 251

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  230 bits (589), Expect = 5e-76
 Identities = 74/258 (28%), Positives = 115/258 (44%), Gaps = 12/258 (4%)

Query: 3   KMKMAK-RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
            M M K R   +VAIVT   Q IG      L   GA V+++   +    +AV  L+  G 
Sbjct: 3   HMYMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH 62

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
           +V  VV  V+N +  +N +    E+ G++D++V+ A    S        +    K  DIN
Sbjct: 63  DVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDIN 122

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGY-----QPQSSMAMYGVTKTALLGLTKAL 174
           +       Q     +  QK   +V I S++G      Q Q++   Y  +K  +    ++L
Sbjct: 123 LNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAA---YNASKAGVHQYIRSL 179

Query: 175 AAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA 233
           AAE AP   R N VAP ++ T    +      +       T + R+G   ++A+   FLA
Sbjct: 180 AAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLA 239

Query: 234 SDDASYITGETLVVAGGM 251
           SD AS +TG  + V  G 
Sbjct: 240 SDAASLMTGAIVNVDAGF 257

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  227 bits (582), Expect = 2e-74
 Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 15/259 (5%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---VI 64
            RF GK  I+T S+ GIG   A     EGA V ++ R +  ++E   ++   G+    + 
Sbjct: 22  ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN 81

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVK 123
            VV  V+    + ++IN T+ KFGKID++V+NA AN +  +        +  K + +N +
Sbjct: 82  AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ 141

Query: 124 SSILLLQDAAPHLQK-GSSVVLISSI-AGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           + I + Q    HL K    +V +SSI AG Q  S    Y   K AL   T+  A ++   
Sbjct: 142 AVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201

Query: 182 T-RVNCVAPGFVPTHFAEYITSNDGVRQTIE-------QNTLLNRLGTTRDMAAAAAFLA 233
             RVN V+PG V T F   +   +     +        +   +   G   ++A    FLA
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 261

Query: 234 SDD-ASYITGETLVVAGGM 251
             + +SYI G+++V  GG 
Sbjct: 262 DRNLSSYIIGQSIVADGGS 280

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  226 bits (579), Expect = 2e-74
 Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 17/259 (6%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           ++   +    +GKVA VT S+ GIG+ +AE     GA V +        ++A    K  G
Sbjct: 27  LDLFSL----KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG 82

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWD 119
           +      C++S+ +  +  I+Q  + FG IDV V+NA    +    +        +K+  
Sbjct: 83  VHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIIS 142

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGY-----QPQSSMAMYGVTKTALLGLTK 172
           +++        +           S+++ SSI+G      Q Q   A Y   K A   L K
Sbjct: 143 VDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQ---APYNTAKAACTHLAK 199

Query: 173 ALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL 232
           +LA E AP  RVN ++PG++ T   ++   +  ++    Q T L R G T+++     +L
Sbjct: 200 SLAIEWAPFARVNTISPGYIDTDITDFA--SKDMKAKWWQLTPLGREGLTQELVGGYLYL 257

Query: 233 ASDDASYITGETLVVAGGM 251
           AS+ +++ TG  +V+ GG 
Sbjct: 258 ASNASTFTTGSDVVIDGGY 276

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  226 bits (579), Expect = 3e-74
 Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 17/261 (6%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---VI 64
            RF  KVAI+T S+ GIG   A     EGA V ++ R  + ++E   ++ A G+    V 
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDIN 121
            VV  V+    +  +++ T+ KFGK+D++V+NA     +    +         D   ++N
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

Query: 122 VKSSILLLQDAAPHLQKGS-SVVLISSIA-GYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           ++S I L + A PHL      +V ISSIA G         Y + K A+   T+  A ++ 
Sbjct: 122 LRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181

Query: 180 PDT-RVNCVAPGFVPTHFAEYITSNDGVRQ-------TIEQNTLLNRLGTTRDMAAAAAF 231
               RVN ++PG V T F   +   +   +       T+++      +G  +D+A   AF
Sbjct: 182 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 241

Query: 232 LASDD-ASYITGETLVVAGGM 251
           LA    +SYI G  LVV GG 
Sbjct: 242 LADRKTSSYIIGHQLVVDGGS 262

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  226 bits (578), Expect = 3e-74
 Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 19/262 (7%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVI 64
            RF  K  I+T S+ GIG   A     EGA+V ++ R  + ++E    +   G+   +V 
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD----I 120
            VV  V+    +  +IN T+++FGKIDV+V+NA A    D+   T       ++     +
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIP-DAFGTTGTDQGIDIYHKTLKL 120

Query: 121 NVKSSILLLQDAAPHLQKGS-SVVLISSI-AGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           N+++ I + +   PHL      +V +SSI AG Q Q     Y + K AL   T++ A ++
Sbjct: 121 NLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 180

Query: 179 APDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIE-------QNTLLNRLGTTRDMAAAAA 230
           A    RVN V+PG V T F   +   D   Q          +   +   G    +A    
Sbjct: 181 AKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL 240

Query: 231 FLASDDAS-YITGETLVVAGGM 251
           FLA  + S YI G+++V  GG 
Sbjct: 241 FLADRNLSFYILGQSIVADGGT 262

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  225 bits (576), Expect = 3e-74
 Identities = 74/257 (28%), Positives = 121/257 (47%), Gaps = 11/257 (4%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M M   +QGK AIV   T G+G     RL   GA V+++ R + N+     +    G  V
Sbjct: 1   MVM-GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRV 56

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             +   +++  +   L     +  G ID++  NA  +  ++   Q  E+  D+ + +N K
Sbjct: 57  HALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTK 115

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
            +   +Q   P +++G S+V  SS+A       M++Y  +K AL+     LAAE+ P   
Sbjct: 116 GAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGI 175

Query: 183 RVNCVAPGFVPT----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
           RVN V+PGF+ T                +   +  T + R GT  ++A A  FLA  +A+
Sbjct: 176 RVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF-EAT 234

Query: 239 YITGETLVVAGGMPSRL 255
           + TG  L V GG+  +L
Sbjct: 235 FTTGAKLAVDGGLGQKL 251

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  225 bits (576), Expect = 4e-74
 Identities = 77/247 (31%), Positives = 131/247 (53%), Gaps = 7/247 (2%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVC 68
            Q K A+VT S++G+G   A RL   G ++V++ +R +K   E   +++  G++V+ V  
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDS-ILQTKESVLDKLWDINVKSSIL 127
           +V    + K +  Q  E FG++DV V+NAA+   V   +++ +E+  D   +IN K+ + 
Sbjct: 62  NVGQPAKIKEMFQQIDETFGRLDVFVNNAASG--VLRPVMELEETHWDWTMNINAKALLF 119

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
             Q+AA  +    G  +V ISS+   +   +    GV+K AL  LT+ LA E++P    V
Sbjct: 120 CAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIV 179

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           N V+ G + T   ++  + + + +   QNT   R+   +DM     FL S  A  I G+T
Sbjct: 180 NAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQT 239

Query: 245 LVVAGGM 251
           ++V GG 
Sbjct: 240 IIVDGGR 246

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  225 bits (577), Expect = 4e-74
 Identities = 75/257 (29%), Positives = 116/257 (45%), Gaps = 17/257 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           +  G+VA++T    G+G  + +R   EGA V V  +  + + E      A G   +GVV 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE---VAHGGNAVGVVG 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD----INVKS 124
            V + Q +K    + +  FGKID ++ NA       ++    E  +D  +D    +NVK 
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118

Query: 125 SILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
            I  ++   P L     SVV   S AG+ P     +Y  TK A++GL + +A E+AP  R
Sbjct: 119 YIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPHVR 178

Query: 184 VNCVAPGFVPT--------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
           VN VAPG + T          +E   S+  +   ++    + R+    +   A  F A+ 
Sbjct: 179 VNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATR 238

Query: 236 DAS-YITGETLVVAGGM 251
             S   TG  L   GGM
Sbjct: 239 GDSLPATGALLNYDGGM 255

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  224 bits (574), Expect = 7e-74
 Identities = 65/251 (25%), Positives = 124/251 (49%), Gaps = 7/251 (2%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           +   + KV I+T  + G+G G+A R   EGA VV++ R ++ ++EA ++++    +++ V
Sbjct: 1   SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTV 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              V N    + +I Q  EKFG+ID++++NAA N           +  + + +I +  + 
Sbjct: 61  QMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFIC-PAEDLSVNGWNSVINIVLNGTF 119

Query: 127 LLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
              Q    +  +     +++ + +   +     +      K  +L +TK LA E      
Sbjct: 120 YCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYG 179

Query: 183 -RVNCVAPGFVPT-HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
            RVN +APG +     A+ +  ++ + +   Q+  L RLGT  ++A  A +L SD+A+YI
Sbjct: 180 IRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYI 239

Query: 241 TGETLVVAGGM 251
            G  + + GG 
Sbjct: 240 NGTCMTMDGGQ 250

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  224 bits (573), Expect = 1e-73
 Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 12/254 (4%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVI 64
           M K  +GKV ++T S+ G+G  +A R   E A VVV+ R +++   +V++ +K  G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDIN 121
            V   V+      NL+   I++FGK+DV+++NA             +   S  +K+ D N
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVS----SHEMSLSDWNKVIDTN 116

Query: 122 VKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           +  + L  ++A  +  +     +V+ +SS+    P      Y  +K  +  +T+ LA E 
Sbjct: 117 LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY 176

Query: 179 APDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
           AP   RVN + PG + T       ++   R  +E    +  +G   ++AA AA+LAS +A
Sbjct: 177 APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA 236

Query: 238 SYITGETLVVAGGM 251
           SY+TG TL   GGM
Sbjct: 237 SYVTGITLFADGGM 250

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  223 bits (571), Expect = 2e-73
 Identities = 69/248 (27%), Positives = 111/248 (44%), Gaps = 6/248 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVV 67
           R  GK A++T +T+GIG  IA      GA +V+S R    +D A   L +  G +V  V 
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             ++       L  +  E FG +DV+V+NA  +     ++ T   + D    +N+++  L
Sbjct: 77  IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQP-VVDTDPQLFDATIAVNLRAPAL 135

Query: 128 LLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-R 183
           L       +     G +++ ++S A   P      Y  +K  L+  TK LA E+ P   R
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
            N V P  V T   + +  ++     +     L R     +++ A  +LASD AS I G 
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGV 255

Query: 244 TLVVAGGM 251
            + V GG 
Sbjct: 256 DIPVDGGY 263

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  223 bits (570), Expect = 4e-73
 Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 12/252 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
             +GKVA++T +  G G G+A+R    GA VV+  R +   +    ++   G   + V  
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAA 62

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            +S        +   + KFGK+D++V+NA       +    +    D++  +NV+   L+
Sbjct: 63  DISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLM 122

Query: 129 LQDAAPHLQK------GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
                PH ++         ++ ++S    +P+ ++A Y  TK  ++ +TKALA E+AP  
Sbjct: 123 TSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAK 182

Query: 183 -RVNCVAPGFVPTHFAEYITSNDG--VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
            RV  + P    T         D   +R+    +  + RL    D+A AAAFL S  AS 
Sbjct: 183 IRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASM 242

Query: 240 ITGETLVVAGGM 251
           ITG  L V GG 
Sbjct: 243 ITGVALDVDGGR 254

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  222 bits (568), Expect = 5e-73
 Identities = 74/249 (29%), Positives = 128/249 (51%), Gaps = 5/249 (2%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           +  + KV IVT +  GIG  IA++  L  + VV     +  +++ V +L+  G EV+GV 
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS  +  +  + +T E + +IDV+ +NA     V  + +  + + +++  +N+ S+  
Sbjct: 63  ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
             +   P +  Q    +V  +SIAG +   + A Y V K  L+GLT+++AA       R 
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182

Query: 185 NCVAPGFVPTHFAEYITSND--GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
             V PG V T+     +     G+R   +  +L +RL    D+A    FLASD+AS++ G
Sbjct: 183 VAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNG 242

Query: 243 ETLVVAGGM 251
           + +VV GG+
Sbjct: 243 DAVVVDGGL 251

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  222 bits (567), Expect = 1e-72
 Identities = 80/254 (31%), Positives = 128/254 (50%), Gaps = 11/254 (4%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M    R+ GKV +VT   +GIG GI       GA VV+  +     +     L+      
Sbjct: 1   MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD----ESGGRALEQELPGA 56

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           + ++C V+     K L+++TI +FG++D VV+NA  +P      +T      +L ++N+ 
Sbjct: 57  VFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLL 116

Query: 124 SSILLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
            +  L + A P+L+K   +V+ ISS+ G   Q+    Y  TK A+  +TKALA + +P  
Sbjct: 117 GTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYG 176

Query: 183 -RVNCVAPGFVPT----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
            RVNC++PG + T      A  +       +       L R+G   ++ AAA FLAS +A
Sbjct: 177 VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS-EA 235

Query: 238 SYITGETLVVAGGM 251
           ++ TG  L+V GG 
Sbjct: 236 NFCTGIELLVTGGA 249

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  222 bits (567), Expect = 2e-72
 Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 6/247 (2%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVC 68
            + KVA +T    GIGF IAE     G   V++SR    V  A  KL  A G   + +  
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V         ++Q +++FG+ID++++ AA N           +    + DI+   +  +
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCP-AGALSFNAFKTVMDIDTSGTFNV 143

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            +          G  +V I++  G + Q+     G  K A+  +T+ LA E  P   RVN
Sbjct: 144 SRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVN 203

Query: 186 CVAPGFVP-THFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
            +APG +  T     +        T    + L RLG   ++A +  +LAS  ASY+TG  
Sbjct: 204 SLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAV 263

Query: 245 LVVAGGM 251
           LV  GG 
Sbjct: 264 LVADGGA 270

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  221 bits (565), Expect = 2e-72
 Identities = 76/259 (29%), Positives = 126/259 (48%), Gaps = 17/259 (6%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M KR +GK A++T S +GIG   AE    EGA+V ++    +   +A  ++   G     
Sbjct: 2   MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYA 58

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   V+        I  T+E  G +D++V+NAA    +  I++      +KL+ INV  +
Sbjct: 59  VQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGT 117

Query: 126 ILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
           +  LQ AA  +     G  ++ ++S AG + ++ +A+Y  TK A++ LT++   ++    
Sbjct: 118 LFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHR 177

Query: 182 TRVNCVAPGFVPT--------HFAEYITSNDG-VRQTIEQNTLLNRLGTTRDMAAAAAFL 232
             VN +APG V           FA Y     G  ++ + +     R+GT  D+   A FL
Sbjct: 178 INVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFL 237

Query: 233 ASDDASYITGETLVVAGGM 251
           AS ++ YI  +T  V GG 
Sbjct: 238 ASAESDYIVSQTYNVDGGN 256

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  221 bits (565), Expect = 2e-72
 Identities = 70/262 (26%), Positives = 128/262 (48%), Gaps = 17/262 (6%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M+K+F GKV +VT +   IG   A RL  EG ++ +    ++ +++A   ++ +G+E   
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
            VC V++ +     ++  +  FGKID + +NA    +   +         ++  INV  +
Sbjct: 61  YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGA 120

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
             +L+  +  +  Q    +V  +S+AG +   +MA YG +K A++ LT+  A ++AP   
Sbjct: 121 FHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNI 180

Query: 183 RVNCVAPGFVPT--------------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAA 228
           RVN ++PG++                    + T    V Q +  +  + R G   ++   
Sbjct: 181 RVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGV 240

Query: 229 AAFLASDDASYITGETLVVAGG 250
            AFL  DD+S++TG  L +AGG
Sbjct: 241 VAFLLGDDSSFMTGVNLPIAGG 262

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  221 bits (565), Expect = 3e-72
 Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 12/261 (4%)

Query: 1   MEKMKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA 58
                M   F   G++A+VT  ++GIG  IA+ L   GA V + +R  +   +   +L A
Sbjct: 16  PRGSHMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA 75

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G +   +   +S+    + L     E   ++D++V+NA  +     +     S  +K+ 
Sbjct: 76  YG-DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAA-LESYPVSGWEKVM 133

Query: 119 DINVKSSILLLQDAAPHL------QKGSSVVLISSIAGYQPQSSMAM-YGVTKTALLGLT 171
            +NV S    +Q   P L      +  + V+ I S+AG       A  YG +K AL  L+
Sbjct: 134 QLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLS 193

Query: 172 KALAAEMAPDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAA 230
           + LA E+  +   VN +APG  P+    +I ++    +    +  + R G   +MAA A 
Sbjct: 194 RMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAI 253

Query: 231 FLASDDASYITGETLVVAGGM 251
            LA    +Y+TG  + + GG 
Sbjct: 254 SLAGTAGAYMTGNVIPIDGGF 274

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  219 bits (561), Expect = 6e-72
 Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 4/250 (1%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIE 62
           M + +RF  +  +V  + + IG   A R   EGA+VV++           V  ++  G  
Sbjct: 1   MSL-QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS 59

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            + +   ++N  + +  I+   +KFG+I  +V  A    +  +I +  E+   ++ D+N+
Sbjct: 60  ALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNL 119

Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            S  L  + A P + KG ++V  SS AG          Y  +K A++  T+ LA E+ P 
Sbjct: 120 TSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK 179

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            RVN V PG + T F +  T  + VR+ +   T L R G++ D+A   AFLASDDA+Y+T
Sbjct: 180 IRVNAVCPGMISTTFHDTFTKPE-VRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVT 238

Query: 242 GETLVVAGGM 251
           G    + GG+
Sbjct: 239 GACYDINGGV 248

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  220 bits (563), Expect = 1e-71
 Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 7/248 (2%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVC 68
           FQGKVA +T    G+G G+   L   GA  V++SRK   +     ++ ++ G +V  + C
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V +    +N +++ I+  G  ++V++NAA N       +   +    + DI +  +  +
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISP-TERLSPNAWKTITDIVLNGTAFV 142

Query: 129 LQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
             +    L   QKG++ + I++I        +      K  +  ++K+LAAE      R 
Sbjct: 143 TLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRF 202

Query: 185 NCVAPGFVPTHFA-EYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           N + PG + T  A   +       + +       RLGT  ++A  AAFL SD AS+I G 
Sbjct: 203 NVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGA 262

Query: 244 TLVVAGGM 251
            +   GG 
Sbjct: 263 VIKFDGGE 270

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  218 bits (559), Expect = 3e-71
 Identities = 76/252 (30%), Positives = 120/252 (47%), Gaps = 6/252 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           +  R +GK+AIVT ++ GIG   A     EGA VVV++R    + E   ++   G E   
Sbjct: 2   VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAA 61

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   V +    + L+   + +FG +D   +NA A  ++  I         +  D N+ S+
Sbjct: 62  LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSA 121

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
            L  +   P +    G S+   SS  G+    + +A Y  +K  L+GL +ALA E+    
Sbjct: 122 FLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARG 181

Query: 183 -RVNCVAPGFVPT--HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
            RVN + PG   T  +FA    +    R  +E    L R+    ++A AA +LASD AS+
Sbjct: 182 IRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASF 241

Query: 240 ITGETLVVAGGM 251
           +TG  L+  GG 
Sbjct: 242 VTGAALLADGGA 253

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  217 bits (556), Expect = 5e-71
 Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 16/261 (6%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEV 63
                   VA+VT  + GIG    E L   GA+V   +R  + +  A   L+ R  G  +
Sbjct: 2   KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARL 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
              VC V +  Q +          G   ++V+NA          +T +    +   +   
Sbjct: 62  FASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVST-FAETTDEAWSEELQLKFF 120

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           S I  ++   P L  +  +++V ++S+   QP+  M      +  +  L +++A E AP 
Sbjct: 121 SVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPK 180

Query: 182 T-RVNCVAPGFVPT----------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAA 230
             RVN +  G V +             E   +    +    +   L RLG   + A A  
Sbjct: 181 GVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAIL 240

Query: 231 FLASDDASYITGETLVVAGGM 251
           FLAS  ++Y TG  + V+GG+
Sbjct: 241 FLASPLSAYTTGSHIDVSGGL 261

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  216 bits (553), Expect = 3e-70
 Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 13/260 (5%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
             M       VA++T +  GIG   A  L  +G +V    R +  V+E   ++   G + 
Sbjct: 21  QSM-MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQA 79

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           I +   VS+  Q +N +   + KFG +D+VV+NA  N     I   K    D+   +N++
Sbjct: 80  IALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLR 139

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSS--MAMYGVTKTALLGLTKALAAEMA 179
            + L L    P+L  + G ++V++SSI G +  ++     Y  TK A + + + LA E+ 
Sbjct: 140 GTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELG 199

Query: 180 PDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL-------LNRLGTTRDMAAAAAF 231
               RVN V PG + T+ ++           I              + G + D+A    F
Sbjct: 200 KHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRF 259

Query: 232 LASDDASYITGETLVVAGGM 251
           L S+ A ++TG  + + GG 
Sbjct: 260 LVSERARHVTGSPVWIDGGQ 279

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  215 bits (549), Expect = 4e-70
 Identities = 78/251 (31%), Positives = 123/251 (49%), Gaps = 9/251 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
            + RF+ KV IVT S  GIG   AE L  EGA+VVV+    +  +    ++ A G   I 
Sbjct: 3   GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAIS 62

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSV--DSILQTKESVLDKLWDINVK 123
           V   VS+ +  K + ++T+ +FG ID +V+NAA    +  D +L        K   +N+ 
Sbjct: 63  VAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLD 122

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            ++   +     +  + G ++V  SS A +        YG+ K  + GLT+ L+ E+   
Sbjct: 123 GALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS---NYYGLAKVGINGLTQQLSRELGGR 179

Query: 182 T-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
             R+N +APG + T      T    +   I +   L+R+GT  D+     FL SD+AS+I
Sbjct: 180 NIRINAIAPGPIDTEANRTTTP-KEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWI 238

Query: 241 TGETLVVAGGM 251
           TG+   V GG 
Sbjct: 239 TGQIFNVDGGQ 249

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  215 bits (550), Expect = 4e-70
 Identities = 54/255 (21%), Positives = 110/255 (43%), Gaps = 7/255 (2%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---SSRKQKNVDEAVVKLKARG 60
           +      + KV ++    + +G   A+   LE  ++V+    ++     ++   +L+ +G
Sbjct: 3   LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG 62

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            +V      +SN ++   L +   ++FGK+D+ ++          I++T E+  D +  I
Sbjct: 63  AKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKK-PIVETSEAEFDAMDTI 121

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           N K +   ++ AA H+     ++ I++          + Y   K  +   T+A + E+  
Sbjct: 122 NNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMK 181

Query: 181 -DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
               VN +APG + T F  Y           +   + N+L    D+A    FL + D  +
Sbjct: 182 QQISVNAIAPGPMDTSFF-YGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTT-DGWW 239

Query: 240 ITGETLVVAGGMPSR 254
           I G+T+   GG  +R
Sbjct: 240 INGQTIFANGGYTTR 254

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  214 bits (548), Expect = 6e-70
 Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 17/262 (6%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
            M       G+ AIVT  ++GIG  IA  L   GA+V ++          V  L+  G  
Sbjct: 3   HMAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGF- 61

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
              V   V+        + + I+  G  D++ +NA  +  +   +   +   D  +D+N 
Sbjct: 62  --AVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWDFNFDVNA 118

Query: 123 KSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +   L  Q A  H         +V  +S+A       +A Y  +K A+ G T+ALA EMA
Sbjct: 119 RGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMA 178

Query: 180 PD-TRVNCVAPGFVPT---------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA 229
           P   RVNCV PGFV T                + + VR      T L R+    D+A   
Sbjct: 179 PKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVV 238

Query: 230 AFLASDDASYITGETLVVAGGM 251
            FLASD A ++TG+ + V GG+
Sbjct: 239 VFLASDAARFMTGQGINVTGGV 260

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  214 bits (547), Expect = 7e-70
 Identities = 72/246 (29%), Positives = 112/246 (45%), Gaps = 6/246 (2%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVCHV 70
            +VAIVT ++ G G  IA R    G  V       + ++E       A   +V+ V   V
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNA--AANPSVDSILQTKESVLDKLWDINVKSSILL 128
           ++       I  T+E+FG IDV+V+NA    N     +  T     DK+  +NV+   L 
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            +   PH+  Q    +V I+S+A        + Y  +K A+L LTK++A + A    R N
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCN 181

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
            V PG + T   ++      +R  +        +GT   +A A  FLA +DA+Y+ G  L
Sbjct: 182 AVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAAL 241

Query: 246 VVAGGM 251
           V+ G  
Sbjct: 242 VMDGAY 247

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  214 bits (547), Expect = 7e-70
 Identities = 75/255 (29%), Positives = 129/255 (50%), Gaps = 16/255 (6%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVS--SRKQKNVDEAVVKLKARGIEVIGVVCH 69
            KVA+VT   QGIG GI+E+L  +G  + V+   ++++   E +  ++A   + + V   
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++     + I++  EK G  DV+V+NA     +  +L+  E  L +++ +NV S    +
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGI 120

Query: 130 QDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           Q A+    +      ++  +SIA  Q    ++ Y  TK A+ GLT+A A E+AP    VN
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180

Query: 186 CVAPGFVPT--------HFAEYITSNDG-VRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
             APG V T          ++      G   +    +  L R     D+A   +FLAS++
Sbjct: 181 AYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASEN 240

Query: 237 ASYITGETLVVAGGM 251
           ++Y+TG+ ++V GGM
Sbjct: 241 SNYVTGQVMLVDGGM 255

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  215 bits (549), Expect = 8e-70
 Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 12/259 (4%)

Query: 1   MEKMKM-AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR 59
            E +   +     +V IVT    GIG   AE     GA VVV+   +        ++   
Sbjct: 15  TENLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI--- 71

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G +  GV   VS+ +  ++++ +T  K+G++DV+V+NA       +++   E   D++  
Sbjct: 72  GSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGT-TGNVVTIPEETWDRIMS 130

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           +NVK   L  +   P +    G S++  +S       +    Y  +K A+  LT+A+A +
Sbjct: 131 VNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMD 190

Query: 178 MAPDT-RVNCVAPGFVPT----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL 232
            A +  RVN VAPG + +               +R       +++R+GT  ++A A  FL
Sbjct: 191 HAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFL 250

Query: 233 ASDDASYITGETLVVAGGM 251
           ASD + + TG  L V GG 
Sbjct: 251 ASDRSRFATGSILTVDGGS 269

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  213 bits (546), Expect = 1e-69
 Identities = 80/249 (32%), Positives = 121/249 (48%), Gaps = 6/249 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M +R + K+A++T    GIG  IAER  +EGA + ++        EA   ++  G  V+ 
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLV--PAPEAEAAIRNLGRRVLT 58

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V C VS     +    Q I  FG+ D++V+NA   P +    +       K ++INV S 
Sbjct: 59  VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI-PFDELTFEQWKKTFEINVDSG 117

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
            L+ +   P +       ++ ++S   +    +   Y  TK A +G T+ALA+++  D  
Sbjct: 118 FLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGI 177

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
            VN +AP  V T   E    +            + RL    D+  AAAFLASDDAS+ITG
Sbjct: 178 TVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITG 237

Query: 243 ETLVVAGGM 251
           +TL V GGM
Sbjct: 238 QTLAVDGGM 246

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  213 bits (546), Expect = 1e-69
 Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 8/256 (3%)

Query: 2   EKMKMAKRFQGKVAIVT-ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           +++      +GKV +VT A+  GIG   A R  LEGA VV+S   ++ + E   +L   G
Sbjct: 12  KEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG 71

Query: 61  I-EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           +  V  VVC V++ +    LI QT+EK G++DV+V+NA        ++   +   D++ +
Sbjct: 72  LGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTP-VVDMTDEEWDRVLN 130

Query: 120 INVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAA 176
           + + S +   + A  +      G  +V  +S+ G++ Q S + Y   K  ++ LT+  A 
Sbjct: 131 VTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAI 190

Query: 177 EMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
           E      R+N V+P      F E  +S   +   +  +    R     ++AA  AFLASD
Sbjct: 191 EAVEFGVRINAVSPSIARHKFLEKTSS-SELLDRLASDEAFGRAAEPWEVAATIAFLASD 249

Query: 236 DASYITGETLVVAGGM 251
            +SY+TGE + V+   
Sbjct: 250 YSSYMTGEVVSVSSQR 265

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  213 bits (546), Expect = 2e-69
 Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 11/257 (4%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EV 63
              RF  +V ++T    G+G   A RL  EGA + +     + ++ +   +       EV
Sbjct: 7   PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEV 66

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           +  V  VS+  Q +  +  T E+FG+ID   +NA      +       +  DK+  IN++
Sbjct: 67  LTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLR 126

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
              L L+     +  Q    VV  +S+ G +   + + Y   K  ++GLT+  A E    
Sbjct: 127 GVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRY 186

Query: 182 T-RVNCVAPGFVPTHFAEYITSN------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
             R+N +APG + T   E               +   Q     R G   ++AA  AFL S
Sbjct: 187 GIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLS 246

Query: 235 DDASYITGETLVVAGGM 251
           DDASY+    + + GG 
Sbjct: 247 DDASYVNATVVPIDGGQ 263

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  213 bits (545), Expect = 2e-69
 Identities = 78/252 (30%), Positives = 120/252 (47%), Gaps = 14/252 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT + QGIG  IA RL  +G +V ++            ++   G   + V   VS+
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
             Q    + Q  +  G  DV+V+NA   P    I      ++DK+++INVK  I  +Q A
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAA 121

Query: 133 APHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVA 188
               +K   G  ++   S AG+     +A+Y  +K A+ GLT+  A ++AP    VN   
Sbjct: 122 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181

Query: 189 PGFVPT--------HFAEYITSNDG-VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
           PG V T          +E      G       +   L RL    D+AA  ++LAS D+ Y
Sbjct: 182 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY 241

Query: 240 ITGETLVVAGGM 251
           +TG++L++ GGM
Sbjct: 242 MTGQSLLIDGGM 253

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  213 bits (545), Expect = 2e-69
 Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 8/251 (3%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
            M    + KVAI+T +  GIG   +  L   GA VV++   + ++  A     + G   +
Sbjct: 4   SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAA---ASVGRGAV 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVK 123
             V  ++N    + LI+ TI+ FG++D+V +NAA ++P+   + Q    V D  + +N +
Sbjct: 61  HHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNAR 120

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            ++L+ + A P L    G ++V ISS   +        Y  TK A+  LT+ +A +    
Sbjct: 121 GTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRH 180

Query: 182 T-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
             R N +APG V T   E       +      + L  R+G   ++A    FLASD A++I
Sbjct: 181 GVRCNAIAPGLVRTPRLEVGLP-QPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFI 239

Query: 241 TGETLVVAGGM 251
           TG+ +    G+
Sbjct: 240 TGQVIAADSGL 250

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  212 bits (542), Expect = 3e-69
 Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 22/252 (8%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
                 +VT  ++GIG  + E L       V++   Q++     +K          +   
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK---------FIKAD 52

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           ++  Q   N+++    K    D +  NA       SI       + K+ D+NV SSI  +
Sbjct: 53  LTKQQDITNVLDII--KNVSFDGIFLNAGILIK-GSIFDIDIESIKKVLDLNVWSSIYFI 109

Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVA 188
           +    +L+ G+S+V   S   +  + +   Y ++K A+  +TK+LA ++A    RVN V 
Sbjct: 110 KGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVC 169

Query: 189 PGFVPT---------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
           PG V T         +      S D  ++  E+   LNR+   +++A    FL SD + +
Sbjct: 170 PGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKF 229

Query: 240 ITGETLVVAGGM 251
           +TG  + + GG 
Sbjct: 230 MTGGLIPIDGGY 241

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  211 bits (540), Expect = 1e-68
 Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 14/251 (5%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
             F GK  +VT   +GIG  IA+    EGA V +             ++ A  I      
Sbjct: 2   GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL-----RPEGKEV-AEAIGGAFFQ 55

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             + + ++R   + +     G++DV+V+NAA      S L  +     ++ ++N+ + + 
Sbjct: 56  VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAPMH 114

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           L   AA  +    G ++V ++S+ G   +   A Y  +K  L+ LT++LA ++AP   RV
Sbjct: 115 LSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRV 174

Query: 185 NCVAPGFVPT----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
           N VAPG + T             +  R+  E    L RLG   ++A A  FLAS+ AS+I
Sbjct: 175 NAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFI 234

Query: 241 TGETLVVAGGM 251
           TG  L V GGM
Sbjct: 235 TGAILPVDGGM 245

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  210 bits (537), Expect = 2e-68
 Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 16/248 (6%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVCHVS 71
            +A+VT +    G    E L  +G +VV       +  E      +  G   +       
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAE----- 56

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDS--ILQTKESVLDKLWDINVKSSILLL 129
             Q+ + L++ T++    ID +VSN      ++   +  T E+ + ++++      ILLL
Sbjct: 57  --QKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLL 114

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           Q A   L    G+SV+ I+S  G +P +   +YG  + A + L ++ A  ++ D   +  
Sbjct: 115 QSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYA 174

Query: 187 VAPGFVPT---HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           + P F             +N  +R+ ++++  L RLG   +M A   FLAS  A+ I G+
Sbjct: 175 IGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQ 234

Query: 244 TLVVAGGM 251
                GG 
Sbjct: 235 FFAFTGGY 242

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  210 bits (538), Expect = 3e-68
 Identities = 81/244 (33%), Positives = 129/244 (52%), Gaps = 6/244 (2%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCH 69
             KVAIVT +++GIG  IA RL  +G +VV++ + K    +E   K++A G + +     
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQAD 85

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           VS+    + L     E FG +DV+V+NA   P   +I +T ++V D++  +N+K +   L
Sbjct: 86  VSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLT-TIAETGDAVFDRVIAVNLKGTFNTL 144

Query: 130 QDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           ++AA  L+ G  ++ +S+        S  +Y   K  +  +T  L+ E+   D  VN VA
Sbjct: 145 REAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVA 204

Query: 189 PGFVPTH-FAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV 247
           PG   T  F E  +  D VR    +   L RLGT +D+A A AFLA  D +++ G+ L  
Sbjct: 205 PGPTATDLFLEGKS--DEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRA 262

Query: 248 AGGM 251
            GG+
Sbjct: 263 NGGI 266

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  210 bits (537), Expect = 4e-68
 Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 15/260 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVI 64
            +K   GKVA+ T + +GIG GIA  LG  GASVVV+     K  +E V +LK  G + +
Sbjct: 15  ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGV 74

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
            +   +S   +   L ++ +  FG +D V+SN+         L+  + + DK++++N + 
Sbjct: 75  AIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRG 133

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
              + Q    H ++G  ++L SSIA       + A+Y  +K A+ G  +A A +      
Sbjct: 134 QFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGV 193

Query: 183 RVNCVAPGFVPT-----------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF 231
            VNC+APG V T                    + + + +     L R+G   D+  A + 
Sbjct: 194 TVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSA 253

Query: 232 LASDDASYITGETLVVAGGM 251
           L  +++ +I G+ + + GG 
Sbjct: 254 LCQEESEWINGQVIKLTGGG 273

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  210 bits (537), Expect = 4e-68
 Identities = 71/255 (27%), Positives = 125/255 (49%), Gaps = 9/255 (3%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKAR 59
            + M  +    GK A VT  ++GIG  IA+RL LEGA+V ++        +AVV  ++  
Sbjct: 20  FQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA 79

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G   + +     + +  +  I +T+E  G +D++V++A    S   + +T  +  D++  
Sbjct: 80  GGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSA-PLEETTVADFDEVMA 138

Query: 120 INVKSSILLLQDAAPHLQKGSSVVLISS-IAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           +N ++  + ++ A+ HL  G  ++ I S +A   P   +++Y  +K AL GLTK LA ++
Sbjct: 139 VNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDL 198

Query: 179 AP-DTRVNCVAPGFVPTHFAEYITSNDG-VRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
            P    VN V PG   T     +   DG   +   +       G  +D+A   A+LA   
Sbjct: 199 GPRGITVNIVHPGSTDTD----MNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQ 254

Query: 237 ASYITGETLVVAGGM 251
             ++TG +L + GG 
Sbjct: 255 GKFVTGASLTIDGGA 269

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  209 bits (535), Expect = 4e-68
 Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 15/252 (5%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M++     G+  +VT + +GIG G  + L   GA VV  SR Q ++D  V         +
Sbjct: 1   MEL--FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV----RECPGI 54

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             V   + + +       + +   G +D++V+NAA        L+  +   D+ +++N++
Sbjct: 55  EPVCVDLGDWEA----TERALGSVGPVDLLVNNAAVALLQP-FLEVTKEAFDRSFEVNLR 109

Query: 124 SSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           + I + Q  A  L       ++V +SS    +  ++ ++Y  TK AL  LTK +A E+ P
Sbjct: 110 AVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGP 169

Query: 181 D-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
              RVN V P  V T   +   S+    +T+     L +      +  A  FL SD +  
Sbjct: 170 HKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGM 229

Query: 240 ITGETLVVAGGM 251
            TG TL V GG 
Sbjct: 230 TTGSTLPVEGGF 241

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  209 bits (535), Expect = 6e-68
 Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 13/257 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVI 64
           M    +GK  ++T S+QGIG   A      GA V +  RK     +  +  ++A G +  
Sbjct: 1   MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAA 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
                ++  +  + L+++ + KFG IDV+++NA        + +  ++  D + D N++S
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRS 120

Query: 125 SILLLQDAAPHL-------QKGSSVVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALAA 176
            ++  + A PHL        + S+V+   SIAG+        +YG  K  L  + K    
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVD 180

Query: 177 EMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
               D  R N V+PG V T F         VR  I     + R GT  +MA A  F AS 
Sbjct: 181 FHTKDGVRFNIVSPGTVDTAFHA--DKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASH 238

Query: 236 DAS-YITGETLVVAGGM 251
            AS YITG+ L + GG 
Sbjct: 239 LASGYITGQVLDINGGQ 255

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  210 bits (537), Expect = 6e-68
 Identities = 78/260 (30%), Positives = 120/260 (46%), Gaps = 13/260 (5%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M       GKVAIVT +  GIG  +A RL  EG  V+ +       D A  K+   G   
Sbjct: 22  MNH-PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGA 77

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
                 VS+ QQ   +++  +  FG +D +V+NA     + S++ T     D++  IN++
Sbjct: 78  AACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLR 136

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            + L  + AAP +  + G ++V +SS+AG         YG++K  ++ L++  AAE+   
Sbjct: 137 GAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSS 196

Query: 182 T-RVNCVAPGFVPT-----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
             R N + P FV T       A +  +            L  R+    +MA    FL SD
Sbjct: 197 GIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSD 256

Query: 236 DASYITGETLVVAGGMPSRL 255
           DAS ITG T +  GG  + L
Sbjct: 257 DASMITGTTQIADGGTIAAL 276

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  209 bits (535), Expect = 8e-68
 Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 20/257 (7%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
             +  + F+GKVA+VT +  GIG  +   L   GA V V+ R             A    
Sbjct: 19  YFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAV-----------AGIAA 67

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            + +   +        L        G++D+VV+NA        I +T ++       +NV
Sbjct: 68  DLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISR-GRITETTDADWSLSLGVNV 126

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           ++   + + A P +    G ++V ++S  G +P    A+Y +TK AL  LT+ +  + AP
Sbjct: 127 EAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAP 186

Query: 181 DT-RVNCVAPGFVPT-----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
              R+N V P  V T      FA+     D     + +   L R+    D+A    FLAS
Sbjct: 187 QGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLAS 246

Query: 235 DDASYITGETLVVAGGM 251
           D A Y+ G  + V GG 
Sbjct: 247 DAARYLCGSLVEVNGGK 263

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  209 bits (535), Expect = 8e-68
 Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 14/263 (5%)

Query: 2   EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARG 60
            +  +  R  GKVA+VT S +GIG  +A  LG  GA VVV+ +   K+ ++ V ++KA G
Sbjct: 8   SETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG 67

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            + I +   +    +   L +Q +  FG +D+ VSN+        +    E   D+++ +
Sbjct: 68  SDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFG-HLKDVTEEEFDRVFSL 126

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSI-AGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           N +    + ++A  HL +G  +VL SS  +        ++Y  +K A+    +  + +  
Sbjct: 127 NTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCG 186

Query: 180 P-DTRVNCVAPGFVPT----------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAA 228
                VN VAPG   T                 + +  +Q     + L+R G  +D+A  
Sbjct: 187 DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANV 246

Query: 229 AAFLASDDASYITGETLVVAGGM 251
             FL S +  ++ G+ L + GG 
Sbjct: 247 VGFLVSKEGEWVNGKVLTLDGGA 269

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  208 bits (532), Expect = 1e-67
 Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 15/252 (5%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           MK+   F G  A+VT + +GIG    + L   GA VV  +R   ++             +
Sbjct: 1   MKL--NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA----KECPGI 54

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             V   + +         + +   G +D++V+NAA        L+  +   D+ + +N++
Sbjct: 55  EPVCVDLGDWDA----TEKALGGIGPVDLLVNNAALVIMQP-FLEVTKEAFDRSFSVNLR 109

Query: 124 SSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           S   + Q  A  +       S+V +SS+  +    ++  Y  TK A+  LTKA+A E+ P
Sbjct: 110 SVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGP 169

Query: 181 DT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
              RVN V P  V T   + ++++    + +++   L +     D+  +  FL SD ++ 
Sbjct: 170 HKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSAS 229

Query: 240 ITGETLVVAGGM 251
            +G  ++V  G 
Sbjct: 230 TSGGGILVDAGY 241

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  208 bits (532), Expect = 2e-67
 Identities = 60/255 (23%), Positives = 119/255 (46%), Gaps = 16/255 (6%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVC 68
           QGK+A+VTA + G+GF  A  L   GA +++ SR ++ ++ A  ++ +   G +V  V  
Sbjct: 6   QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            +        L  +     G  D++V +          ++      D+ + +  +S++ +
Sbjct: 66  DIREPGDIDRLF-EKARDLGGADILVYSTGGPRPGR-FMELGVEDWDESYRLLARSAVWV 123

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            + AA  +  +    +V I S+   +P   +A+  + +  ++G+ + LA E+AP    VN
Sbjct: 124 GRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVN 183

Query: 186 CVAPGFVPTHFAEYI---------TSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
            V P  + T     +          + +   +++     + R+G   ++A+  AFLAS+ 
Sbjct: 184 AVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEK 243

Query: 237 ASYITGETLVVAGGM 251
           AS+ITG  + V GG 
Sbjct: 244 ASFITGAVIPVDGGA 258

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  208 bits (532), Expect = 2e-67
 Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 24/259 (9%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M      + KV IVT ++ GIG  IAER   EG+ V+  S                  + 
Sbjct: 1   MGF-SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKY 48

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             + C V+N  Q K  I+   +++G I V+V+NA        I         ++ D+N+ 
Sbjct: 49  DHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIES-YGKIESMSMGEWRRIIDVNLF 107

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
                 + A P++   +  S+V ISS+       + + Y  +K A++GLTK++A + AP 
Sbjct: 108 GYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL 167

Query: 182 TRVNCVAPGFVPT---------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL 232
            R N V P  + T                  +           + R+G  +++A+A AFL
Sbjct: 168 LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFL 227

Query: 233 ASDDASYITGETLVVAGGM 251
           AS +AS+ITG  L V GG+
Sbjct: 228 ASREASFITGTCLYVDGGL 246

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  209 bits (534), Expect = 3e-67
 Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 12/254 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-----GIEV 63
             QG+VAIVT    GIG  I + L   G++VV++SRK + +  A  +L+A         V
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           I + C++ N ++  NL+  T++ FGKI+ +V+N      +             + + N+ 
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLT 133

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
            +  + +        + G S+V I               G  +  +  LTK+LA E A  
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTKSLALEWACS 192

Query: 182 -TRVNCVAPGFVPTH--FAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
             R+NCVAPG + +      Y +      +   Q     R+G   ++++   FL S  AS
Sbjct: 193 GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAAS 252

Query: 239 YITGETLVVAGGMP 252
           +ITG+++ V GG  
Sbjct: 253 FITGQSVDVDGGRS 266

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  208 bits (531), Expect = 3e-67
 Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 23/266 (8%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--I 61
             M  + +GK A+VT ST GIG  IA  L  EGA+V+++ R+++NV+E + +++A+    
Sbjct: 2   NAMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDA 61

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
            +  VV  +   Q  +++    IEK+ K+D++++N              +    KL+++N
Sbjct: 62  ILQPVVADLGTEQGCQDV----IEKYPKVDILINNLGI-FEPVEYFDIPDEDWFKLFEVN 116

Query: 122 VKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           + S + L +     + +     V+ I+S A   P   MA Y  TKT  L L+++LA    
Sbjct: 117 IMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTT 176

Query: 180 PDT-RVNCVAPGFVPT----------HFAEYITSNDGVRQTIEQN---TLLNRLGTTRDM 225
                VN + PG   T          +  E +T  +  ++ +++N   +++ RL    ++
Sbjct: 177 GTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEI 236

Query: 226 AAAAAFLASDDASYITGETLVVAGGM 251
           A    FL+S  +S I G  L + GG+
Sbjct: 237 AHLVTFLSSPLSSAINGSALRIDGGL 262

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  208 bits (532), Expect = 3e-67
 Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 15/258 (5%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGV 66
              +GKVA+VT + +GIG  +A  LG  G  V+V+ +   ++ +E V  +K  G +   V
Sbjct: 25  ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACV 84

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
             +V   +    +  + ++ FGK+D+V SN+        +        D+++ IN +   
Sbjct: 85  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQF 143

Query: 127 LLLQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
            + ++A  HL+ G  ++L+ SI G  +     A+Y  +K A+    + +A +MA     V
Sbjct: 144 FVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITV 203

Query: 185 NCVAPGFVPT-----------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA 233
           N VAPG + T              E +++ +       Q + L R+G   D+A    FLA
Sbjct: 204 NVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA 263

Query: 234 SDDASYITGETLVVAGGM 251
           S+D  ++TG+ + + GG 
Sbjct: 264 SNDGGWVTGKVIGIDGGA 281

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  207 bits (530), Expect = 3e-67
 Identities = 49/245 (20%), Positives = 91/245 (37%), Gaps = 15/245 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
                  ++T ++Q +G   A RL   G  V++S R +      + +  A     + +  
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGA-----VALYG 78

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
             S        I+    +   +  VV NA+    +      +     +++ +++ +  L+
Sbjct: 79  DFSCETGIMAFIDLLKTQTSSLRAVVHNASEW--LAETPGEEADNFTRMFSVHMLAPYLI 136

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
                P L   + + +V IS     +  S    Y  TK  L  LT + AA  AP  +VN 
Sbjct: 137 NLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAPLVKVNG 196

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV 246
           +AP  +          +   R      + L        +  +  +L    ++Y+TG TL 
Sbjct: 197 IAPALLMFQ----PKDDAAYRANALAKSALGIEPGAEVIYQSLRYLLD--STYVTGTTLT 250

Query: 247 VAGGM 251
           V GG 
Sbjct: 251 VNGGR 255

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  208 bits (531), Expect = 5e-67
 Identities = 75/254 (29%), Positives = 121/254 (47%), Gaps = 9/254 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
              R Q KVAI+T    GIG   A+     GA VV++     +  +    + +    +  
Sbjct: 10  STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISF 68

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLWDINVKS 124
           V C V+  +  +NL++ TI K GK+D++  N    + +  SIL+       ++ DINV  
Sbjct: 69  VHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYG 128

Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAM-YGVTKTALLGLTKALAAEMAPD 181
           + L+ + AA  +   K  S+V  +SI+ +     ++  Y  TK A+LGLT +L  E+   
Sbjct: 129 AFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY 188

Query: 182 T-RVNCVAPGFVPTHFAEYITSNDG---VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
             RVNCV+P  V +     +   D         +   L   L    D+A A A+LA D++
Sbjct: 189 GIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDES 248

Query: 238 SYITGETLVVAGGM 251
            Y++G  LV+ GG 
Sbjct: 249 KYVSGLNLVIDGGY 262

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  208 bits (531), Expect = 7e-67
 Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 3/251 (1%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-EAVVKL-KARGIE 62
             + R + + A+VT    GIG   A     EGA V ++    +  D + V  L +  G +
Sbjct: 42  VGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRK 101

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            + +   +S+    ++L+++  E  G +D++   A    ++  I         + + +NV
Sbjct: 102 AVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNV 161

Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
            +   + Q+A P L KG+S++  SSI  YQP   +  Y  TK A+L  ++ LA ++A   
Sbjct: 162 FALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKG 221

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            RVN VAPG + T                 Q T + R G   ++A    +LAS ++SY+T
Sbjct: 222 IRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVT 281

Query: 242 GETLVVAGGMP 252
            E   V GG  
Sbjct: 282 AEVHGVCGGEH 292

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  206 bits (527), Expect = 2e-66
 Identities = 72/259 (27%), Positives = 123/259 (47%), Gaps = 14/259 (5%)

Query: 2   EKMKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR 59
             M +   F   GK A++T ++ GIG  +A      GA V V++R    +     ++   
Sbjct: 20  GSMSVLDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV 79

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G + + + C V+   Q + +++Q   + G ID+ V NA        +L        ++ D
Sbjct: 80  GGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA-MLDMPLEEFQRIQD 138

Query: 120 INVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQ---PQSSMAMYGVTKTALLGLTKA 173
            NV    L  Q AA  +     G +++  +S++G+    PQ  ++ Y  +K A++ LTKA
Sbjct: 139 TNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQ-QVSHYCTSKAAVVHLTKA 197

Query: 174 LAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL 232
           +A E+AP   RVN V+PG++ T   E +          E    L R+G   ++     +L
Sbjct: 198 MAVELAPHQIRVNSVSPGYIRTELVEPL---ADYHALWEPKIPLGRMGRPEELTGLYLYL 254

Query: 233 ASDDASYITGETLVVAGGM 251
           AS  +SY+TG  +V+ GG 
Sbjct: 255 ASAASSYMTGSDIVIDGGY 273

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  205 bits (523), Expect = 3e-66
 Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 11/255 (4%)

Query: 4   MKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
           M     F   G  A VT +  GIG  I       GA +++  R+   +D A  +L     
Sbjct: 1   MDYRTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL--GAA 58

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
               +V  V++ +          E    + ++V++A      D+ L+T ++   ++  +N
Sbjct: 59  VAARIVADVTDAEAMTAAA-AEAEAVAPVSILVNSAGIARLHDA-LETDDATWRQVMAVN 116

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQ--PQSSMAMYGVTKTALLGLTKALAAE 177
           V       +     +  +   ++V + S++G         + Y  +K A+  LT+ALAAE
Sbjct: 117 VDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAE 176

Query: 178 MAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
            A    RVN +APG+V T     +     + +T    T + R G   ++AAAA FLAS  
Sbjct: 177 WAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPA 236

Query: 237 ASYITGETLVVAGGM 251
           ASY+TG  L V GG 
Sbjct: 237 ASYVTGAILAVDGGY 251

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  205 bits (523), Expect = 4e-66
 Identities = 63/265 (23%), Positives = 124/265 (46%), Gaps = 21/265 (7%)

Query: 1   MEKMKMAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--L 56
           ++++ +    +GKV +VT  +  +G+G   A      GA+V ++   +    E  VK   
Sbjct: 13  LDQLSL----KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELE 68

Query: 57  KARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDK 116
           K  GI+     C V + +  + L+   +  FG+ID  ++NA A      IL       + 
Sbjct: 69  KTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSG-ILDGSVEAWNH 127

Query: 117 LWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGY-----QPQSSMAMYGVTKTALLG 169
           +  +++  +    +    H   +   S+V+ +S++G+     Q Q+S   Y V K   + 
Sbjct: 128 VVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTS---YNVAKAGCIH 184

Query: 170 LTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA 229
           + ++LA E     RVN ++PG++ T  ++++      +Q       + R G  +++  A 
Sbjct: 185 MARSLANEWRDFARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLAKELKGAY 242

Query: 230 AFLASDDASYITGETLVVAGGMPSR 254
            + ASD ++Y TG  L++ GG  +R
Sbjct: 243 VYFASDASTYTTGADLLIDGGYTTR 267

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  204 bits (522), Expect = 5e-66
 Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 9/254 (3%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           + R  GKVAI+T  T GIG  IA +   EGA V+++ R     ++A   +     ++   
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFF 59

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
               S+      L + T + FG +  +V+NA    +   + +T  +   KL  +N+    
Sbjct: 60  QHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKS-VEETTTAEWRKLLAVNLDGVF 118

Query: 127 LLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
              +     ++    G+S++ +SSI G+    S+  Y  +K A+  ++K+ A + A    
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 183 --RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
             RVN V PG++ T   + +   +       + T +  +G   D+A    +LAS+++ + 
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTK-TPMGHIGEPNDIAYICVYLASNESKFA 237

Query: 241 TGETLVVAGGMPSR 254
           TG   VV GG  ++
Sbjct: 238 TGSEFVVDGGYTAQ 251

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  203 bits (520), Expect = 1e-65
 Identities = 83/257 (32%), Positives = 132/257 (51%), Gaps = 8/257 (3%)

Query: 2   EKMKMAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KA 58
               M + F  +G+VA+VT  ++G+GFGIA+ L   G SVVV+SR  +   EA  KL + 
Sbjct: 9   HHHHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK 68

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G+E +   C VSN ++ K L+    EKFGK+D VV+ A  N       +       ++ 
Sbjct: 69  YGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP-AEEFPLDEFRQVI 127

Query: 119 DINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALA 175
           ++N+  +  + ++A   L      S++ I S+   +    +++ Y  +K  +  LTKALA
Sbjct: 128 EVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALA 187

Query: 176 AEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
            E      RVN +APG+  T   E + S+      + +   L R G   D+   A FLAS
Sbjct: 188 KEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLAS 247

Query: 235 DDASYITGETLVVAGGM 251
           ++A Y+TG+ + V GG 
Sbjct: 248 EEAKYVTGQIIFVDGGW 264

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  203 bits (518), Expect = 2e-65
 Identities = 57/248 (22%), Positives = 93/248 (37%), Gaps = 15/248 (6%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
             AIVT      G G A RL   G +V       K  DE                    +
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMS 55

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            Q+   LI      +G++DV+VSN    P    I +          +        L+   
Sbjct: 56  EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115

Query: 133 APHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAP 189
           A  +  +K   ++ I+S   + P   ++ Y   +     L  AL+ E+      V  + P
Sbjct: 116 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 175

Query: 190 GFVPT------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
            ++ +      +  E   +N      +++ T L RLGT +++    AFLAS    Y+TG+
Sbjct: 176 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 235

Query: 244 TLVVAGGM 251
              +AGG 
Sbjct: 236 VFWLAGGF 243

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  202 bits (517), Expect = 2e-65
 Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 7/252 (2%)

Query: 6   MAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M   F   GK A+VT S +G+GF  AE L   GA V+++  +   + E+V  L  +G + 
Sbjct: 1   MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
            GV   V++    +   ++   +   +D++++NA        +++ +     K+ D N+ 
Sbjct: 61  HGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKP-MVELELENWQKVIDTNLT 119

Query: 124 SSILLLQDAAPH-LQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           S+ L+ + AA   + + S   ++ I S+     + ++A Y   K  +  LT ++AAE A 
Sbjct: 120 SAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQ 179

Query: 181 D-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
              + N + PG++ T     +  +      ++ +T   R G   ++   A FL+S  + Y
Sbjct: 180 FNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDY 239

Query: 240 ITGETLVVAGGM 251
           I G+ + V GG 
Sbjct: 240 INGQIIYVDGGW 251

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  203 bits (519), Expect = 3e-65
 Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 9/259 (3%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKAR 59
           +    M  +    VAIVT   +GIG GIA  L   G  + ++          V+  L   
Sbjct: 18  LYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL 77

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA-ANPSVDSILQTKESVLDKLW 118
           G  VI +   +++    +  ++  + +FG+ID +V+NA  A+   D  L  K    D + 
Sbjct: 78  GARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIV 137

Query: 119 DINVKSSILLLQDAAPHL-----QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
            +N++ ++   Q     +     +   S++ I+S++          Y ++K  L   ++ 
Sbjct: 138 GVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQG 197

Query: 174 LAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL 232
           LA  +A     V  V PG + +       S             + R G   D+    A L
Sbjct: 198 LALRLAETGIAVFEVRPGIIRSDMTA-AVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGL 256

Query: 233 ASDDASYITGETLVVAGGM 251
           A     + TG  +   GG+
Sbjct: 257 AGGQFGFATGSVIQADGGL 275

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  202 bits (516), Expect = 3e-65
 Identities = 69/252 (27%), Positives = 125/252 (49%), Gaps = 18/252 (7%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R  GKV I+TA+ QGIG   A     EGA V+ +      ++E+ ++   +   +   V
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATD-----INESKLQELEKYPGIQTRV 56

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             V+  +Q    I+Q   +  ++DV+ + A       ++L  +E   D   ++NV+S  L
Sbjct: 57  LDVTKKKQ----IDQFANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYL 111

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGY-QPQSSMAMYGVTKTALLGLTKALAAEMAPDT-R 183
           +++   P +  QK  +++ +SS+A   +   +  +Y  TK A++GLTK++AA+      R
Sbjct: 112 MIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR 171

Query: 184 VNCVAPGFVPT----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
            NCV PG V T       +   + +  R    +     R  T  ++A    +LASD+++Y
Sbjct: 172 CNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAY 231

Query: 240 ITGETLVVAGGM 251
           +TG  +++ GG 
Sbjct: 232 VTGNPVIIDGGW 243

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  202 bits (517), Expect = 4e-65
 Identities = 78/259 (30%), Positives = 126/259 (48%), Gaps = 22/259 (8%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           + F  KVAIVT  + GIG  + + L   GA VV  S  +K+        K          
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK---------- 59

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             V+N ++ K  + +T +K+G+ID++V+NA        +  T   +  ++ D+NV  S L
Sbjct: 60  IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGSYL 118

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVN 185
           + +   P +      S++ I+S+  Y    + A Y  +K ALLGLT+++A + AP  R N
Sbjct: 119 MAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCN 178

Query: 186 CVAPGFVPT---------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
            V PG + T            E   + +   +   +   + R+G   ++A   AFLASD 
Sbjct: 179 AVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDR 238

Query: 237 ASYITGETLVVAGGMPSRL 255
           +S+ITG  L V GG+ S+L
Sbjct: 239 SSFITGACLTVDGGLLSKL 257

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  201 bits (515), Expect = 6e-65
 Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 9/252 (3%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGV 66
              +GKVA+VT +++GIG  IA+RL  +GA V +    +K   E  V  +++ G     +
Sbjct: 3   SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSI 62

Query: 67  VCHVSNGQQRKNLINQTIEKF------GKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
             ++ +    + L +    +        K D++++NA   P    I +T E   D++  +
Sbjct: 63  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGA-FIEETTEQFFDRMVSV 121

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           N K+   ++Q A   L+  S ++ ISS A          Y +TK A+  +T  LA ++  
Sbjct: 122 NAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGA 181

Query: 181 -DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
               VN + PGFV T     + S+  ++Q     +  NRLG   D+A  AAFLAS D+ +
Sbjct: 182 RGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRW 241

Query: 240 ITGETLVVAGGM 251
           +TG+ + V+GG 
Sbjct: 242 VTGQLIDVSGGS 253

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  201 bits (514), Expect = 1e-64
 Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 16/249 (6%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R  GK  +VT +  GIG    +    EGAS+V   R+++ + EAV    A   E I VV
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAV---AALEAEAIAVV 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS+ +  + +  + +E+FG++  V   A    S            +K+  +N+  S L
Sbjct: 59  ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHS-ALSWNLPLEAWEKVLRVNLTGSFL 117

Query: 128 LLQDAAPHLQKGSSVVLISSIAGY----QPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
           + + A   L++G S+VL  S+AG           A Y   K  ++GL + LA E+A    
Sbjct: 118 VARKAGEVLEEGGSLVLTGSVAGLGAFGL-----AHYAAGKLGVVGLARTLALELARKGV 172

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           RVN + PG + T     +       +     + L R G   ++A AA FL S++++YITG
Sbjct: 173 RVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITG 230

Query: 243 ETLVVAGGM 251
           + L V GG 
Sbjct: 231 QALYVDGGR 239

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  201 bits (513), Expect = 2e-64
 Identities = 85/255 (33%), Positives = 121/255 (47%), Gaps = 20/255 (7%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGV 66
              QG+  +VT  T+GIG GIA      GA+V V+ R   ++D  V  L +    +VIGV
Sbjct: 6   FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGV 65

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQT-KESVLDKLWDINVKSS 125
              VS+  Q   L  + +E+FG IDVV +NA   P  D+ L T     L+ ++ +NV  +
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFP--DAPLATMTPEQLNGIFAVNVNGT 123

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGY------QPQSSMAMYGVTKTALLGLTKALAAE 177
              +Q     L       VVL SSI G             + YG TK A LG  +  A E
Sbjct: 124 FYAVQACLDALIASGSGRVVLTSSITGPITGYPGW-----SHYGATKAAQLGFMRTAAIE 178

Query: 178 MAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
           +AP    VN + PG + T         +    ++ ++     LGT  D+   AAFLA+ +
Sbjct: 179 LAPHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKE 236

Query: 237 ASYITGETLVVAGGM 251
           A YITG+ + V GG 
Sbjct: 237 AGYITGQAIAVDGGQ 251

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  200 bits (511), Expect = 3e-64
 Identities = 71/255 (27%), Positives = 104/255 (40%), Gaps = 15/255 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVV 67
            F  K  IVT   +GIG      +   GA+V V  R   +  E   K+ K  G++     
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           C VSN       I Q     G I  +++NA     V    +        ++D+NV     
Sbjct: 71  CDVSNTDIVTKTIQQIDADLGPISGLIANAGV-SVVKPATELTHEDFAFVYDVNVFGVFN 129

Query: 128 LLQDAAPHL---QKGSSVVLISSIAGY---QPQSSM----AMYGVTKTALLGLTKALAAE 177
             +  A      Q+  S+V+ SS++     Q   +       Y  +K A   L K LAAE
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 189

Query: 178 MAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
            A    RVN ++PG+V T    ++  +  +R     N  LNR     +M   A  L SD 
Sbjct: 190 WASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDH 247

Query: 237 ASYITGETLVVAGGM 251
           A+Y+TG    + GG 
Sbjct: 248 ATYMTGGEYFIDGGQ 262

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  200 bits (510), Expect = 3e-64
 Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 11/251 (4%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            R QGKVA+VT    G+G  + + L  EGA V  S   +    +   +L   G   + V 
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVR 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             VS+      ++     + G ++V+V+NA      D +   +     +L  IN +S  +
Sbjct: 59  HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGD-METGRLEDFSRLLKINTESVFI 117

Query: 128 LLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT---R 183
             Q     +++ G S++ ++S++ + P    A Y  +K A+  LT+A A          R
Sbjct: 118 GCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIR 177

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQ---NTLLNRLGTTRDMAAAAAFLASDDASYI 240
           VN + P  + T   +        ++ +          R      +A    FLASD++S +
Sbjct: 178 VNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM 237

Query: 241 TGETLVVAGGM 251
           +G  L     +
Sbjct: 238 SGSELHADNSI 248

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  199 bits (509), Expect = 4e-64
 Identities = 54/251 (21%), Positives = 97/251 (38%), Gaps = 15/251 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG---IE 62
                  ++ +VT ++ GIG   A      GA+V++  R ++ + +    +        +
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 65

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
              +       +  + L  +    + ++D V+ NA     V  + +    V   +  +NV
Sbjct: 66  WFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNV 125

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            ++ +L Q   P L      S+V  SS  G Q +++   Y  +K A  G+ + LA E   
Sbjct: 126 NATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ 185

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
             RVNC+ PG   T           +R +        +L T  D+     +L  DD+   
Sbjct: 186 RLRVNCINPGGTRT----------AMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRK 235

Query: 241 TGETLVVAGGM 251
           TG T     G 
Sbjct: 236 TGMTFDAQPGR 246

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  198 bits (506), Expect = 2e-63
 Identities = 70/273 (25%), Positives = 115/273 (42%), Gaps = 29/273 (10%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGI 61
               +  +   A++T   + IG  IA RL  +G  VVV  R  +   + +V     AR  
Sbjct: 3   ETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG 62

Query: 62  EVIGVVCHVSN----GQQRKNLINQTIEKFGKIDVVVSNA----------AANPSVDSIL 107
             +     +S         +++I+ +   FG+ DV+V+NA            + +  +  
Sbjct: 63  SAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADA 122

Query: 108 QTKESVLDKLWDINVKSSILLLQDAAPHL-------QKGSSVVLISSIAGYQPQSSMAMY 160
           +  ++ + +L+  N  + + L++  A           +  SVV +       P     +Y
Sbjct: 123 KPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVY 182

Query: 161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRL 219
            + K AL GLT+A A E+AP   RVN VAPG                ++   +   L + 
Sbjct: 183 TMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP----PAMPQETQEEYRRKVPLGQS 238

Query: 220 -GTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
             +   +A A AFL S DA YITG TL V GG+
Sbjct: 239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  197 bits (504), Expect = 3e-63
 Identities = 68/249 (27%), Positives = 110/249 (44%), Gaps = 14/249 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M+ R  GKVA+V+   +G+G      +  EGA VV      +       +L         
Sbjct: 1   MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARY 57

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   V+   Q K  ++  +  FG + V+V+NA     + +I     +   ++ D+N+   
Sbjct: 58  VHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGV 116

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
            L ++     +      S++ ISSI G     +   Y  TK A+ GLTK+ A E+ P   
Sbjct: 117 FLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGI 176

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           RVN + PG V T   +++  +          T L R     +++    +LASD++SY TG
Sbjct: 177 RVNSIHPGLVKTPMTDWVPEDIF-------QTALGRAAEPVEVSNLVVYLASDESSYSTG 229

Query: 243 ETLVVAGGM 251
              VV GG 
Sbjct: 230 AEFVVDGGT 238

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  196 bits (501), Expect = 6e-63
 Identities = 71/251 (28%), Positives = 104/251 (41%), Gaps = 15/251 (5%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVV--SSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           GKV +VT  ++GIG  I + L       VV   +R +  + +   K    G     VV  
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGD 58

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           ++     K L+N  ++  GKID +V+NA     V ++ +   +   KL+DIN  S + L+
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 130 QDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVA 188
             A P L+K + +VV +SS A     SS   YG +K AL      LA E     +   VA
Sbjct: 119 GIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-ERQVKAIAVA 177

Query: 189 PGFVPTHFAEYITSNDGV-------RQTIEQNTLLNRLGTTRDMAAAAAFLASDD-ASYI 240
           PG V T     I  N G         +        N+L  +   A   A LA       +
Sbjct: 178 PGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGV 237

Query: 241 TGETLVVAGGM 251
            G+ L      
Sbjct: 238 NGQYLSYNDPA 248

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  197 bits (504), Expect = 8e-63
 Identities = 78/258 (30%), Positives = 122/258 (47%), Gaps = 20/258 (7%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEV 63
           K+      +  +VT  T+GIG GIA      GA+V V++R  + +     +L +     V
Sbjct: 34  KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNV 93

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQT-KESVLDKLWDINV 122
           IGV   VS+     +     ++ FG +DVV +NA   P  ++ L T     L ++ D+NV
Sbjct: 94  IGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFP--EARLDTMTPEQLSEVLDVNV 151

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGY------QPQSSMAMYGVTKTALLGLTKAL 174
           K ++  +Q     L       V+L SSI G             + YG +K A LG  +  
Sbjct: 152 KGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGW-----SHYGASKAAQLGFMRTA 206

Query: 175 AAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA 233
           A E+AP    VN + PG + T     +   +     + ++  +  LG+  D+   AAFLA
Sbjct: 207 AIELAPRGVTVNAILPGNILTEGLVDM--GEEYISGMARSIPMGMLGSPVDIGHLAAFLA 264

Query: 234 SDDASYITGETLVVAGGM 251
           +D+A YITG+ +VV GG 
Sbjct: 265 TDEAGYITGQAIVVDGGQ 282

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  197 bits (502), Expect = 9e-63
 Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 8/251 (3%)

Query: 6   MAKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M   F   G+ A+VT +  GIG  IA      GA V+   R    V E   ++   G   
Sbjct: 23  MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSA 81

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             VV  +++ +   N+  + +    ++DV+V+NA          +       ++  +N+ 
Sbjct: 82  EAVVADLADLEGAANVA-EELAATRRVDVLVNNAGIIARAP-AEEVSLGRWREVLTVNLD 139

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           ++ +L +     +       +V I+S+  +Q   ++A Y  +K A++GLT+ALA+E A  
Sbjct: 140 AAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGR 199

Query: 182 T-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
              VN +APG+V T     + ++D     I       R  T  DM   A FLASD ASY+
Sbjct: 200 GVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYV 259

Query: 241 TGETLVVAGGM 251
            G+ L V GG 
Sbjct: 260 HGQVLAVDGGW 270

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  196 bits (502), Expect = 1e-62
 Identities = 63/252 (25%), Positives = 128/252 (50%), Gaps = 7/252 (2%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEV 63
           K +++ +GK  ++T    GIG  ++     EGA++ ++   ++       +  +  G++ 
Sbjct: 40  KGSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKC 99

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           + +   +S+ Q  K+++ +T+ + G ++++V+N A       +       L+K + IN+ 
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF 159

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
           S   + + A  HL++G  ++  +SI  Y+   ++  Y  TK A++  T++L+  +     
Sbjct: 160 SYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGI 219

Query: 183 RVNCVAPGFVPTHFAEYITS--NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
           RVN VAPG + T     I S  ++        N  + R G   ++A A  +LAS D+SY+
Sbjct: 220 RVNGVAPGPIWT---PLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYV 276

Query: 241 TGETLVVAGGMP 252
           TG+ + V GG+ 
Sbjct: 277 TGQMIHVNGGVI 288

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  195 bits (499), Expect = 2e-62
 Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 27/263 (10%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEV 63
           MA    GKVA+VT + QGIG   AE L L+GA V +     +   +    L  +    + 
Sbjct: 1   MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKT 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           + + C V++ QQ ++   + ++ FG++D++V+NA        +    E   +K   IN+ 
Sbjct: 61  LFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAG-------V--NNEKNWEKTLQINLV 111

Query: 124 SSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK--ALAA 176
           S I        ++ K     G  ++ +SS+AG  P +   +Y  +K  ++G T+  ALAA
Sbjct: 112 SVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAA 171

Query: 177 EMAPDT-RVNCVAPGFVPTHFAEYITSNDG------VRQTIEQNTLLNRLGTTRDMAAAA 229
            +     R+N + PGFV T   E I   +        +  I+       +     +A   
Sbjct: 172 NLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGL 231

Query: 230 AFLASDDASYITGETLVVAGGMP 252
             L  DDA  + G  + +     
Sbjct: 232 ITLIEDDA--LNGAIMKITTSKG 252

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  196 bits (500), Expect = 3e-62
 Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 29/273 (10%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGI 61
           +      +   A+VT + + IG  IA +L   G  VV+          ++     K R  
Sbjct: 15  VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN 74

Query: 62  EVIGVVCHVSNGQQR----KNLINQTIEKFGKIDVVVSNA---------AANPSVDSILQ 108
             +     ++N        + +IN     FG+ DV+V+NA           +   +S  +
Sbjct: 75  TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGK 134

Query: 109 TKESVLDKLWDINVKSSILLLQDAAPHL--------QKGSSVVLISSIAGYQPQSSMAMY 160
           T E+ + +L   N  +  LL    A               S+V +      QP  + ++Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 194

Query: 161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRL 219
            + K AL+GLT++ A E+AP   RVN VAPG         +   +  +    +   L R 
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLP----VAMGEEEKDKWRRKVPLGRR 250

Query: 220 -GTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
             +   +A A  FL S  A YITG  + V GG+
Sbjct: 251 EASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 283

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  195 bits (498), Expect = 4e-62
 Identities = 65/274 (23%), Positives = 116/274 (42%), Gaps = 26/274 (9%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV-------------SSRKQKNV 49
              MA + +G+VA +T + +G G   A R+  EGA ++                    ++
Sbjct: 2   PGSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDL 61

Query: 50  DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQT 109
            E V  ++A    ++  V    +  + + +++  +   G++D++V+NA       +    
Sbjct: 62  SETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA-PQAWDDI 120

Query: 110 KESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTA 166
                  + DINV  +   +   AP + +   G S++LISS AG + Q  M  Y  +K A
Sbjct: 121 TPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHA 180

Query: 167 LLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAEYITS--------NDGVRQTIEQNTLLN 217
           + GL +A AAE+   + RVN V PG V T                 +     +    L +
Sbjct: 181 VTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD 240

Query: 218 RLGTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
            +    D+A    +LASD++  +T   + V  G 
Sbjct: 241 WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  193 bits (494), Expect = 1e-61
 Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 9/257 (3%)

Query: 2   EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARG 60
           E +         V +VT  ++GIG  +      +G  V V+    +   +AVV  +   G
Sbjct: 16  ENLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG 75

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            E + +   V N      + +    +FG++D +V+NA        + +     ++++  +
Sbjct: 76  GEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRV 135

Query: 121 NVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQS-SMAMYGVTKTALLGLTKAL 174
           NV  SIL   +A   + +     G ++V +SS+A     +     Y  +K A+   T  L
Sbjct: 136 NVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGL 195

Query: 175 AAEMAPDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA 233
           A E+A +  RVN V PG + T         D  R+ +  +  + R G   ++A A  +L 
Sbjct: 196 AREVAAEGIRVNAVRPGIIETDLHASGGLPDRARE-MAPSVPMQRAGMPEEVADAILYLL 254

Query: 234 SDDASYITGETLVVAGG 250
           S  ASY+TG  L V+GG
Sbjct: 255 SPSASYVTGSILNVSGG 271

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  193 bits (492), Expect = 1e-61
 Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 10/247 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
              GK  I+T   +G+G   A +    GA VV++    +       +L   G        
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHL 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V+  +  + ++    E+FG +D +V+NA  +     +         K+ +IN+    + 
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTG-MFLETESVERFRKVVEINLTGVFIG 117

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
           ++   P +    G S+V ISS AG    +  + YG +K  + GL+K  A E+  D  RVN
Sbjct: 118 MKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVN 177

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTT-RDMAAAAAFLASDDASYITGET 244
            V PG   T       +     +    NT + R+G    ++A A   L SD +SY+TG  
Sbjct: 178 SVHPGMTYTPMTA--ETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAE 235

Query: 245 LVVAGGM 251
           L V GG 
Sbjct: 236 LAVDGGW 242

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  192 bits (491), Expect = 6e-61
 Identities = 71/282 (25%), Positives = 117/282 (41%), Gaps = 33/282 (11%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV----------------SSRKQ 46
              M  R +GKVA VT + +G G   A RL  EGA ++                  +   
Sbjct: 2   PGSMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTP 61

Query: 47  KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSI 106
           +++ E    +K     ++     V +    K  ++  +E+ G++D++V+NA      D++
Sbjct: 62  EDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTL 121

Query: 107 LQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVT 163
            +T E    ++ DIN+      ++   PH+     G S++L SS+ G +       Y   
Sbjct: 122 DKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAA 181

Query: 164 KTALLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIE----------- 211
           K  ++GL +A   E+     RVN V P  V T       +    R  +E           
Sbjct: 182 KHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPIC 241

Query: 212 --QNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
              +TL        D++ A  F ASD+A YITG TL +  G 
Sbjct: 242 QMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS 283

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  193 bits (492), Expect = 6e-61
 Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 29/278 (10%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV------------SSRKQKNVD 50
              MA + +GKVA +T + +G G   A  L  EGA ++                   ++ 
Sbjct: 19  PGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLA 78

Query: 51  EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTK 110
           E V +++A G  +I     V +    +  ++  + + G++D+V++NAA       + +  
Sbjct: 79  ETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMD 138

Query: 111 ESVLDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTAL 167
                 + D+N+  + +  + A PH+   ++G S+V  SSI G +   ++  Y  +K  L
Sbjct: 139 PKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGL 198

Query: 168 LGLTKALAAEMAPDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIE-------------QN 213
            GL + +A E+ P   RVN V P  V T       +    R  +E              +
Sbjct: 199 HGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMH 258

Query: 214 TLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
            L        D++ A  FL SDDA YITG +L V GG 
Sbjct: 259 VLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGA 296

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  191 bits (488), Expect = 8e-61
 Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 33/260 (12%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
            + M    R Q KV ++T ++QGIG G+          VV +SR  K          +  
Sbjct: 20  FQSMM---RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK---------PSAD 67

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKL 117
            ++  V   +S  +    ++ + IE+FG+ID +V+NA    A P     ++  +   D  
Sbjct: 68  PDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKP----FVEMTQEDYDHN 123

Query: 118 WDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQP---QSSMAMYGVTKTALLGLTK 172
             +NV     + Q AA  +  Q    +V I++    QP     S     +TK  L  +T+
Sbjct: 124 LGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSAL-ASLTKGGLNAVTR 182

Query: 173 ALAAEMAPDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF 231
           +LA E +    RVN V+PG + T     +        T+     + R+G  RD+  A  +
Sbjct: 183 SLAMEFSRSGVRVNAVSPGVIKTP----MHP-AETHSTLAGLHPVGRMGEIRDVVDAVLY 237

Query: 232 LASDDASYITGETLVVAGGM 251
           L  + A +ITGE L V GG 
Sbjct: 238 L--EHAGFITGEILHVDGGQ 255

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  191 bits (488), Expect = 1e-60
 Identities = 55/256 (21%), Positives = 102/256 (39%), Gaps = 25/256 (9%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-------NVDEAVVKLKARGI 61
              GK   +T +++GIG  IA R   +GA+V ++++           +  A   + A G 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
           + + + C +    Q +  +  T++ FG ID++V+NA+A   +   L T     D +  +N
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI-WLRGTLDTPMKRFDLMQQVN 121

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAE 177
            + S +  Q   PHL       ++ ++      P        Y + K  +  +T  LAAE
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAE 181

Query: 178 MAPDT-RVNCVAPG-FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
             P    +N + P   + T     +   D                    MA AA  + + 
Sbjct: 182 FGPQGVAINALWPRTVIATDAINMLPGVD-----------AAACRRPEIMADAAHAVLTR 230

Query: 236 DASYITGETLVVAGGM 251
           +A+   G+ L+    +
Sbjct: 231 EAAGFHGQFLIDDEVL 246

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  191 bits (487), Expect = 2e-60
 Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 17/266 (6%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           + +         +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G
Sbjct: 11  VPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG 70

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWD 119
           +E  G  C V +  + + L+   +E++G +DV+V+NA           +  + +   + +
Sbjct: 71  VEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPG--GGATAELADELWLDVVE 128

Query: 120 INVKSSILLLQDAAPHL----QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
            N+     + +          +    +V I+S  G Q     A Y  +K  ++G TKAL 
Sbjct: 129 TNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALG 188

Query: 176 AEMAP-DTRVNCVAPGFVPT---------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDM 225
            E+A     VN V PGFV T         +   +  S +     I     + R     ++
Sbjct: 189 LELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV 248

Query: 226 AAAAAFLASDDASYITGETLVVAGGM 251
           A   A+L    A+ +T + L V GG+
Sbjct: 249 AEMVAYLIGPGAAAVTAQALNVCGGL 274

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  189 bits (482), Expect = 3e-60
 Identities = 75/244 (30%), Positives = 117/244 (47%), Gaps = 15/244 (6%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           + A+VT  ++GIG  IAE L   G  V ++SR   N +EA     A+ +  + +   +  
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASR---NPEEA-----AQSLGAVPLPTDLEK 54

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
               K L+ + +E  G + V+V  AA N      L+       ++  +++  + LL Q A
Sbjct: 55  -DDPKGLVKRALEALGGLHVLVHAAAVNVRKP-ALELSYEEWRRVLYLHLDVAFLLAQAA 112

Query: 133 APHL--QKGSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
           APH+       V+ I S+  +     +    Y   KTALLGLT+ALA E A    RVN +
Sbjct: 113 APHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLL 172

Query: 188 APGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV 247
            PG+V T F   +  N  + + I     + R     ++A  AA L  D+A Y+TG+ + V
Sbjct: 173 CPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAV 232

Query: 248 AGGM 251
            GG 
Sbjct: 233 DGGF 236

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  190 bits (486), Expect = 3e-60
 Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 16/261 (6%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL--KARGIEV 63
             +    K A++T ST GIG  IA  L   GA++V++     +    V           V
Sbjct: 19  YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTV 78

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           +     ++   +  +++    ++FG  D++V+NA     V+ I        D++  +N+ 
Sbjct: 79  LHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLS 137

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           SS   ++ A P +  +    ++ I+S  G       + Y   K  ++GLTK +A E+A  
Sbjct: 138 SSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAES 197

Query: 182 -TRVNCVAPGFVPT----------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAA 230
              VN + PG+V T               IT    + + + +     +  T   +A+ A 
Sbjct: 198 GVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLAL 257

Query: 231 FLASDDASYITGETLVVAGGM 251
           +LA DDA+ ITG  + + GG 
Sbjct: 258 YLAGDDAAQITGTHVSMDGGW 278

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  190 bits (486), Expect = 3e-60
 Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 11/251 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVV 67
             +G++A+VT    G+G GIA+ L  EG SVV++ R+   +D A  ++  R G  V  VV
Sbjct: 30  SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVV 89

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           C V +  Q   L      +F ++D++V+NA +N     + +      + +   N+  + L
Sbjct: 90  CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFL 149

Query: 128 LLQDAAPHLQK----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
             Q A   ++     G  ++   SI+   P+ + A Y  TK A+ GLTK+ A +    D 
Sbjct: 150 CTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDI 209

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD-DASYIT 241
               +  G   T     ++   GV Q   +            +A A  ++AS   ++ + 
Sbjct: 210 ACGQIDIGNAATDMTARMS--TGVLQANGE-VAAEPTIPIEHIAEAVVYMASLPLSANVL 266

Query: 242 GETLVVAGGMP 252
             T V+A  MP
Sbjct: 267 TMT-VMATRMP 276

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  189 bits (482), Expect = 4e-60
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 17/246 (6%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---V 63
            +  +G+V +VT + +GIG   A      GASVV+  R + ++ E   ++K+ G     +
Sbjct: 9   PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLI 68

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           I +    +  QQ + L  +   +FG++D ++ NA+       + Q  +    ++  +NV 
Sbjct: 69  IALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVN 128

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           ++ +L +   P L   + +S+   SS  G + +++   YGV+K A  GL + LA E+   
Sbjct: 129 ATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGV 188

Query: 182 T--RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
           T  R N + PG   T            R     +          D+     +L   D++ 
Sbjct: 189 TAVRANSINPGATRTGM----------RAQAYPDENPLNNPAPEDIMPVYLYLMGPDSTG 238

Query: 240 ITGETL 245
           I G+ L
Sbjct: 239 INGQAL 244

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  189 bits (483), Expect = 4e-60
 Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 9/253 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVI 64
           M+     + A++TA T+G+G  + E+L  +G SV V+        E + +  K     + 
Sbjct: 1   MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQ 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVK 123
            V   V+  +    ++ + +  FGKID +++NA         L   +E   +++   N+ 
Sbjct: 61  FVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLT 120

Query: 124 SSILLLQDAAPHL--QKGSSVVLIS--SIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +   LL+   P +  Q    ++                + +   K  L+ LTK +A E A
Sbjct: 121 AVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEA 180

Query: 180 P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
                 N V PG +     E        RQ  E NT + R GT  D+A   +FL  DD+ 
Sbjct: 181 EYGITANMVCPGDIIGEMKEAT--IQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSD 238

Query: 239 YITGETLVVAGGM 251
            ITG  + V G +
Sbjct: 239 MITGTIIEVTGAV 251

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  189 bits (482), Expect = 4e-60
 Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 28/257 (10%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
            F GK   VT + +GIG+  A      GA V    +                      V 
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQA----------FTQEQYPFATEVM 53

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDINVKSS 125
            V++  Q   +  + + +  ++D +V+ A             Q  +    + + +NV  +
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGILRMGA----TDQLSKEDWQQTFAVNVGGA 109

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
             L Q        Q+G ++V ++S A + P+  M+ YG +K AL  L  ++  E+A    
Sbjct: 110 FNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGV 169

Query: 183 RVNCVAPGFVPT--------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
           R N V+PG   T                  G  +  +    L ++   +++A    FLAS
Sbjct: 170 RCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLAS 229

Query: 235 DDASYITGETLVVAGGM 251
           D AS+IT + +VV GG 
Sbjct: 230 DLASHITLQDIVVDGGS 246

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  189 bits (483), Expect = 5e-60
 Identities = 71/242 (29%), Positives = 112/242 (46%), Gaps = 13/242 (5%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
               G+VA+VT +++GIG  IA +LG  GA VV+++R  + +     ++ A G E     
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           C +S+           +   G+ DV+V+NA        +   K +  D L  +N+K+  L
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYL 144

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           LL+  AP +   K   ++ ISS+AG  P +  A Y  +K  L GL  + A E+     RV
Sbjct: 145 LLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRV 204

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           + VAPG V T F   ++          + + L  +    D+A   A LA+        E 
Sbjct: 205 SLVAPGSVRTEFGVGLS---------AKKSALGAI-EPDDIADVVALLATQADQSFISEV 254

Query: 245 LV 246
           LV
Sbjct: 255 LV 256

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  188 bits (481), Expect = 8e-60
 Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 15/253 (5%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
            G+V +VT +++GIG GIA +L   GA+V ++ R    +     + ++ G + + VVC  
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDS 63

Query: 71  SNGQQRKNLINQT-IEKFGKIDVVVSNAAANPSVDS------ILQTKESVLDKLWDINVK 123
           S   + ++L  Q   E+ G++DV+V+NA A              +T  S+ D + ++ ++
Sbjct: 64  SQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLR 123

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
                    A  +       +V+ISS    Q   ++  YGV K A   L    A E+   
Sbjct: 124 GHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVP-YGVGKAACDKLAADCAHELRRH 182

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTI---EQNTLLNRLGTTRDMAAAAAFLASD-D 236
                 + PG V T   +   + + V Q     +  +  +   TT         LA+D +
Sbjct: 183 GVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPN 242

Query: 237 ASYITGETLVVAG 249
              ++G+ L    
Sbjct: 243 ILSLSGKVLPSCD 255

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  188 bits (481), Expect = 1e-59
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 17/260 (6%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           +   + + A VT  + GIG  +A  L   G +V   +R  KNV  AV  L+A G +V G 
Sbjct: 19  SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGS 78

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSS 125
            C V++  +    +   +E+FG I ++V++A    +         +++   + D N+   
Sbjct: 79  SCDVTSTDEVHAAVAAAVERFGPIGILVNSAGR--NGGGETADLDDALWADVLDTNLTGV 136

Query: 126 ILLLQDAAPHL----QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
             + ++              +V I+S  G Q     A Y  +K  ++G TK++  E+A  
Sbjct: 137 FRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKT 196

Query: 181 DTRVNCVAPGFVPT---------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF 231
              VN V PG+V T         +   +  +   V +       L R  T  ++A    +
Sbjct: 197 GITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGY 256

Query: 232 LASDDASYITGETLVVAGGM 251
           L +D A+ IT + L V GG+
Sbjct: 257 LVTDAAASITAQALNVCGGL 276

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  188 bits (481), Expect = 2e-59
 Identities = 66/275 (24%), Positives = 113/275 (41%), Gaps = 25/275 (9%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV-------------SSRKQK 47
                 A   QG+VA +T + +G G   A RL  EGA ++              +    +
Sbjct: 4   SMVAGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPE 63

Query: 48  NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL 107
           ++DE    ++ +G + +  V  V +    + L+   +E+FG++DVVV+NA        + 
Sbjct: 64  DLDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWG-RVW 122

Query: 108 QTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK 164
           +  +   D +  +N+  +   L+   P + +   G S+V++SS AG +       Y  +K
Sbjct: 123 ELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASK 182

Query: 165 TALLGLTKALAAEMAPDT-RVNCVAPGFVPT-------HFAEYITSNDGVRQTIEQNTLL 216
             L  LT  LA E+     RVN + P  V T           +      V          
Sbjct: 183 HGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQP 242

Query: 217 NRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
           N   T  ++A   A+LA D +  +TG  + V  G 
Sbjct: 243 NGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  188 bits (480), Expect = 3e-59
 Identities = 75/253 (29%), Positives = 130/253 (51%), Gaps = 8/253 (3%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           K       + KVA+VT + +GIG  IA+ L    + V+  SR QK+ D  V ++K+ G E
Sbjct: 35  KENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE 94

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDIN 121
             G    VS  ++   +IN+ + +   +D++V+NA      D++  + K    + +   N
Sbjct: 95  SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT--RDNLFLRMKNDEWEDVLRTN 152

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           + S   + Q  +  +   +   ++ ISSI G       A Y  +K  ++G TK+LA E+A
Sbjct: 153 LNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELA 212

Query: 180 P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
             +  VN +APGF+ +   + I  ++ +++ I  N    R+GT  ++A  A FL+SD + 
Sbjct: 213 SRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSG 270

Query: 239 YITGETLVVAGGM 251
           YI G   V+ GG+
Sbjct: 271 YINGRVFVIDGGL 283

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  187 bits (476), Expect = 4e-59
 Identities = 62/254 (24%), Positives = 107/254 (42%), Gaps = 15/254 (5%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
            +GK A+VT ST GIG GIA+ L   GA++V++     +   A+ ++   G++ +     
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFG--DPAPALAEIARHGVKAVHHPAD 59

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           +S+  Q + L      +FG +D++V+NA     V  + Q      DK+  +N+ +     
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGT 118

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           + A P +  +    ++ I+S+ G    +  A Y   K  ++GLTK +  E A      N 
Sbjct: 119 RLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNA 178

Query: 187 VAPGFVPT---------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
           + PG+V T           A            + +        T   +     FL S+  
Sbjct: 179 ICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAG 238

Query: 238 SYITGETLVVAGGM 251
           S + G    V GG 
Sbjct: 239 SQVRGAAWNVDGGW 252

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  186 bits (476), Expect = 6e-59
 Identities = 82/254 (32%), Positives = 128/254 (50%), Gaps = 8/254 (3%)

Query: 2   EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
               M K    +VAIVT +++GIG  IA  L   GA V+ ++  +   +      K  G+
Sbjct: 18  GPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL 77

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDI 120
           E  G V +V++      L+  T+++FG ++V+V+NA    + D +  + K+   D + D 
Sbjct: 78  EGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGI--TQDQLAMRMKDDEWDAVIDT 135

Query: 121 NVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           N+K+   L +     +   +G  +V I+S+ G         Y   K  + G+T+ALA E+
Sbjct: 136 NLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREI 195

Query: 179 AP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
                 VNCVAPGF+ T   + +      +  ++    L RLG+  D+A A AFLAS  A
Sbjct: 196 GSRGITVNCVAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQA 253

Query: 238 SYITGETLVVAGGM 251
            YITG TL V GGM
Sbjct: 254 GYITGTTLHVNGGM 267

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  186 bits (474), Expect = 6e-59
 Identities = 70/249 (28%), Positives = 115/249 (46%), Gaps = 11/249 (4%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           +R  GK A+VT + QGIG  IA RL  +GA+V+VS    +    A     + G +   + 
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAA---ASIGKKARAIA 58

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDS-ILQTKESVLDKLWDINVKSSI 126
             +S+    K L  +     G ID++V+NA+  P               K+ D+N+  + 
Sbjct: 59  ADISDPGSVKALFAEIQALTGGIDILVNNASIVP--FVAWDDVDLDHWRKIIDVNLTGTF 116

Query: 127 LLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
           ++ +     +    K   V+ I+S   +    +MA Y   K  ++G T+ALA E+     
Sbjct: 117 IVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNI 176

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
             N V PG + +   +  + ++     +E    +   G    +A   +FLASDDA +ITG
Sbjct: 177 TANAVTPGLIESDGVK-ASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITG 235

Query: 243 ETLVVAGGM 251
           +TL V  GM
Sbjct: 236 QTLNVDAGM 244

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  186 bits (475), Expect = 1e-58
 Identities = 65/285 (22%), Positives = 110/285 (38%), Gaps = 40/285 (14%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV------------SSRKQKNVDEAVVK 55
            R Q KV +VT   +G G   A +L  EGA +++                 ++++EA ++
Sbjct: 6   GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLE 65

Query: 56  LKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD 115
           ++  G +       V +       +   + +FGK+DVVV+NA   P    +         
Sbjct: 66  VEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHL---PVQAFA 122

Query: 116 KLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG-----------YQPQSSMAMYGVTK 164
             +D++    I  +  A P+L  G+S++   S+AG                  A Y   K
Sbjct: 123 DAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAK 182

Query: 165 TALLGLTKALAAEMAPDT-RVNCVAPGFVPT-------------HFAEYITSNDGVRQTI 210
             +   T  LAA++AP + R N + P  V T                E  +  D +    
Sbjct: 183 QLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFP 242

Query: 211 EQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSRL 255
               +        D++ A  FLASD++ Y+TG    V  G   + 
Sbjct: 243 AMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLKF 287

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  185 bits (473), Expect = 2e-58
 Identities = 52/254 (20%), Positives = 109/254 (42%), Gaps = 21/254 (8%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-------VDEAVVKLKARGI 61
             +GK   ++  ++GIG  IA+R+  +GA+V + ++  +        +  A  +++  G 
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
           + + +V  + +G      + +T+E+FG ID+ V+NA+A  ++ SI +      D +  I 
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAI-NLGSIEEVPLKRFDLMNGIQ 124

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSS-MAMYGVTKTALLGLTKALAAEM 178
           V+ +  + Q   PH+  +    ++ +S     +P+      Y + K  +      +A E+
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEEL 184

Query: 179 APDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
                  N + P                V+  +  +  + R       A AA  + +  +
Sbjct: 185 RDAGIASNTLWPRTTVA--------TAAVQNLLGGDEAMARSRKPEVYADAAYVVLNKPS 236

Query: 238 SYITGETLVVAGGM 251
           SY TG TL+    +
Sbjct: 237 SY-TGNTLLCEDVL 249

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  185 bits (472), Expect = 4e-58
 Identities = 58/276 (21%), Positives = 112/276 (40%), Gaps = 29/276 (10%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK------------NVDEAVVK 55
             F+GK A++T   +G+G   A  L   GA + +  R +             ++ E V  
Sbjct: 6   ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVAL 65

Query: 56  LKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD 115
           ++  G   I     V +    ++ + +  +  G ID+ ++NA  +  +  + + + +  D
Sbjct: 66  VEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIST-IALLPEVESAQWD 124

Query: 116 KLWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
           ++   N+  +   +   AP +  +    +V +SS+ G+    + A Y  +K  ++GLTK 
Sbjct: 125 EVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKC 184

Query: 174 LAAEMAP-DTRVNCVAPGFVPT-------------HFAEYITSNDGVRQTIEQNTLLNRL 219
            A ++      VN VAPG + T                E  T  D        +      
Sbjct: 185 AAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF 244

Query: 220 GTTRDMAAAAAFLASDDASYITGETLVVAGGMPSRL 255
               ++  A  FL  + +S+ITG  L +  G  +R+
Sbjct: 245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATARM 280

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  183 bits (468), Expect = 8e-58
 Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 16/257 (6%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVIGVV 67
            +GKVA+VT ST GIG GIA  L  +GA +V++        E V        G++V+   
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             +S G+  + L++  + + G+ID++V+NA        I        D +  +N+ +   
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFH 120

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
               A PH+  Q    ++ I+S  G    ++ + Y   K  ++G TK  A E A      
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180

Query: 185 NCVAPGFVPT----------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
           N + PG+V T               +      R+ + +     +  T   +   A FLAS
Sbjct: 181 NAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240

Query: 235 DDASYITGETLVVAGGM 251
           D A+ ITG T+ V GG 
Sbjct: 241 DAAAQITGTTVSVDGGW 257

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  182 bits (464), Expect = 2e-57
 Identities = 75/251 (29%), Positives = 131/251 (52%), Gaps = 9/251 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVI 64
           M  + QGKV++VT ST+GIG  IAE+L   G++V+++    +       ++    G++  
Sbjct: 1   MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAH 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVK 123
           GV  ++ + +       +       ID++V+NA      D +  +      +++  +N+ 
Sbjct: 61  GVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGIT--RDKLFLRMSLLDWEEVLKVNLT 118

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
            + L+ Q++   +  Q+   +V ISS+ G+        Y  TK  L+G TK+LA E+AP 
Sbjct: 119 GTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPR 178

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
           +  VN VAPGF+ T     +  ++ ++Q  ++   L R G+  ++A    FL S+ ASYI
Sbjct: 179 NVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYI 236

Query: 241 TGETLVVAGGM 251
           TGE + V GGM
Sbjct: 237 TGEVIHVNGGM 247

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  181 bits (463), Expect = 3e-57
 Identities = 64/249 (25%), Positives = 120/249 (48%), Gaps = 20/249 (8%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M    + K  +V A+++GIG  +A+ L  EGA V + +R ++ +  +  +          
Sbjct: 13  MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY--------- 63

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           VVC +         ++   EK  ++D++V NA    +     +       +  D    + 
Sbjct: 64  VVCDLRK------DLDLLFEKVKEVDILVLNAGGPKAGF-FDELTNEDFKEAIDSLFLNM 116

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
           I ++++  P +  +    +V I+S +   P  ++      + AL G  K L+ E+AP   
Sbjct: 117 IKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGI 176

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
            VNCVAPG+  T   + + S +  ++ +E    + R+    ++A+  AFL S+ ASY+TG
Sbjct: 177 TVNCVAPGWTETERVKELLS-EEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTG 235

Query: 243 ETLVVAGGM 251
           +T+VV GG+
Sbjct: 236 QTIVVDGGL 244

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  181 bits (462), Expect = 5e-57
 Identities = 82/248 (33%), Positives = 137/248 (55%), Gaps = 9/248 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVV 67
           + +GK AIVT S++G+G  IA +LG  GA++V++        +A  +  KA GI V+   
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSI 126
             V N +  +N++   ++ FG+ID++V+NA      D+++ +  E   D + + N+KS+ 
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGIT--RDTLMLKMSEKDWDDVLNTNLKSAY 119

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           L  +  +  +  QK   ++ I+SIAG    +  A Y  +K  L+G TK++A E A     
Sbjct: 120 LCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIY 179

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
            N VAPG + T   + +   D V++    N  L R GT  ++A    FLASDD++YITG+
Sbjct: 180 CNAVAPGIIKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQ 237

Query: 244 TLVVAGGM 251
            + + GG+
Sbjct: 238 VINIDGGL 245

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  180 bits (460), Expect = 8e-57
 Identities = 69/251 (27%), Positives = 113/251 (45%), Gaps = 22/251 (8%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R + K  ++T +  GIG    E    EGA +V    ++  + EA     A  +    VV 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA-----AEAVGAHPVVM 56

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQT-KESVLDKLWDINVKSSIL 127
            V++    +    + +   G++D VV  A      D+          + +  +N+  S L
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGIT--RDNFHWKMPLEDWELVLRVNLTGSFL 114

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGY----QPQSSMAMYGVTKTALLGLTKALAAEMAP- 180
           + + A+  +  +   S+VL +S        Q     A Y  +   ++GLT+ LA E+   
Sbjct: 115 VAKAASEAMREKNPGSIVLTASRVYLGNLGQ-----ANYAASMAGVVGLTRTLALELGRW 169

Query: 181 DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
             RVN +APGF+ T     +   + VR+     T L R G   ++A AA FL SD++S+I
Sbjct: 170 GIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFI 227

Query: 241 TGETLVVAGGM 251
           TG+ L V GG 
Sbjct: 228 TGQVLFVDGGR 238

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  180 bits (460), Expect = 1e-56
 Identities = 73/246 (29%), Positives = 132/246 (53%), Gaps = 8/246 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
              KVA+VT +++GIGF +A  L  +GA+VV ++  Q + ++    +K +G +  G+V +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSILL 128
           +S+ +  +N   +   +   ID++V+NA      D+++ +  E     + + N+ S   +
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGIT--RDNLMMRMSEDEWQSVINTNLSSIFRM 120

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
            ++    +  ++   ++ I S+ G         Y   K  ++G +K+LA E+A  +  VN
Sbjct: 121 SKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVN 180

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
            VAPGF+ T   + +   D  +  I       ++G  +D+AAA AFLAS++A YITG+TL
Sbjct: 181 VVAPGFIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTL 238

Query: 246 VVAGGM 251
            V GGM
Sbjct: 239 HVNGGM 244

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  182 bits (463), Expect = 1e-56
 Identities = 66/286 (23%), Positives = 103/286 (36%), Gaps = 46/286 (16%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKA-RGIEVIG 65
                 VA+VT + + +G  IAE L  EG +V +   +      A+   L A R    I 
Sbjct: 5   TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64

Query: 66  VVCHVSN-----------------GQQRKNLINQTIEKFGKIDVVVSNA----------- 97
           V   +SN                   +   L+      +G+ DV+V+NA           
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 124

Query: 98  --AANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL--------QKGSSVVLISS 147
               +       +  E+    L+  N  +   L++  A  +            S++ +  
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

Query: 148 IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV 206
               QP     +Y + K AL GLT++ A E+AP   RVN V PG               V
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV----DDMPPAV 240

Query: 207 RQTIEQNT-LLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
            +       L  R  +  +++    FL S  A YITG  + V GG 
Sbjct: 241 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 286

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  180 bits (460), Expect = 2e-56
 Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 33/277 (11%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV------------SSRKQKNVDEAV 53
                 GKVA +T + +G G   A RL  +GA ++                  + +   V
Sbjct: 7   SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATV 66

Query: 54  VKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESV 113
             ++  G  ++     V + +     +   +++ G++D+VV+NA   P     +   +  
Sbjct: 67  KLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP-----MSAGDDG 121

Query: 114 LDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAG----YQPQSSMAMYGVTKTA 166
              + D+N+      ++ A P L K   G S+VLISS AG             Y   K  
Sbjct: 122 WHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHG 181

Query: 167 LLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIE--------QNTLLN 217
           ++GL +  A  +A    RVN + P  V T       + + + +            N +  
Sbjct: 182 VVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPV 241

Query: 218 RLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR 254
            +    D+A A A+L SD A YITG TL V  G  ++
Sbjct: 242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLNK 278

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  181 bits (462), Expect = 2e-56
 Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 30/283 (10%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV------------SSRKQKN 48
             +     R QGKVA +T + +G G   A RL  +GA +V             +    + 
Sbjct: 35  RGQGARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEE 94

Query: 49  VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQ 108
           + E V  ++ +G  +I     V +    + ++++ + +FG ID++VSN   +   + ++ 
Sbjct: 95  LKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGE-VVS 153

Query: 109 TKESVLDKLWDINVKSSILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKT 165
             +     +   N+  +    +   P +    +G SV+ +SS  G +     + Y  +K 
Sbjct: 154 LTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKH 213

Query: 166 ALLGLTKALAAEMAPDT-RVNCVAPGFVPT-------------HFAEYITSNDGVRQTIE 211
            + GL  +LA E+     RVN V PG V T                E  T  D      +
Sbjct: 214 GVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQ 273

Query: 212 QNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR 254
              L        D++ A A+LASD+A YI G  + V GG  +R
Sbjct: 274 LTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR 316

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  182 bits (463), Expect = 3e-56
 Identities = 64/286 (22%), Positives = 101/286 (35%), Gaps = 46/286 (16%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVIG 65
                 VA+VT + + +G  IAE L  EG +V +   +      A+       R    I 
Sbjct: 42  TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101

Query: 66  VVCHVSN-----------------GQQRKNLINQTIEKFGKIDVVVSNA----------- 97
           V   +SN                   +   L+      +G+ DV+V+NA           
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 161

Query: 98  --AANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL--------QKGSSVVLISS 147
               +       +  E+    L+  N  +   L++  A  +            S++ +  
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221

Query: 148 IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV 206
               QP     +Y + K AL GLT++ A E+AP   RVN V PG               V
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV----DDMPPAV 277

Query: 207 RQTIEQNT-LLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
            +       L  R  +  +++    FL S  A YITG  + V GG 
Sbjct: 278 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 323

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  179 bits (456), Expect = 4e-56
 Identities = 82/247 (33%), Positives = 136/247 (55%), Gaps = 9/247 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVC 68
            +GKVA+VT +++GIG  IA  L  +GA+VVV+    +     VV  +K  G + I V  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSIL 127
            V+N +   N++ QT++ FG++D++V+NA      D++L + KE   D + + N+K   L
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVT--KDNLLMRMKEEEWDTVINTNLKGVFL 119

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
             +  +  +  Q+   +V I+S+ G       A Y   K  ++GLTK  A E+A  +  V
Sbjct: 120 CTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITV 179

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           N +APGF+ T   + +  ++ ++  + +     + G  +D+A A  F ASD + YITG+T
Sbjct: 180 NAIAPGFIATDMTDVL--DENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQT 237

Query: 245 LVVAGGM 251
           L V GGM
Sbjct: 238 LNVDGGM 244

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  179 bits (456), Expect = 7e-56
 Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 13/250 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           +   K+AIVT +  G+G  +A  L   G  V ++ R+   + E   ++   G + + V  
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPT 81

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V++    + L   T+EKFG++DV+ +NA        +     +   ++ D N+    L 
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLC 141

Query: 129 LQDAAPHLQK----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            Q+A   ++     G  ++   SI+   P+   A Y  TK A+ GLTK+ + +    D  
Sbjct: 142 TQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIA 201

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD-DASYITG 242
              +  G   T  A+ +    GV Q       +  +     +A+A  ++AS    + +  
Sbjct: 202 CGQIDIGNADTPMAQKMK--AGVPQADLS-IKVEPVMDVAHVASAVVYMASLPLDANVQF 258

Query: 243 ETLVVAGGMP 252
            T ++A  MP
Sbjct: 259 MT-IMATKMP 267

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  178 bits (454), Expect = 8e-56
 Identities = 80/252 (31%), Positives = 131/252 (51%), Gaps = 11/252 (4%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M      +GKVA+VT +++GIG  IAE L   GA V+ ++  +         L   G   
Sbjct: 1   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL---GDNG 57

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINV 122
            G+  +V+N +  + ++    ++FG +D++V+NA    + D++L + KE     + + N+
Sbjct: 58  KGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGI--TRDNLLMRMKEEEWSDIMETNL 115

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            S   L +     +  ++   ++ + S+ G    +  A Y   K  ++G TK++A E+A 
Sbjct: 116 TSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVAS 175

Query: 181 -DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
               VN VAPGF+ T   + +  ND  R          RLG  R++A+A AFLAS +A+Y
Sbjct: 176 RGVTVNTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAY 233

Query: 240 ITGETLVVAGGM 251
           ITGETL V GGM
Sbjct: 234 ITGETLHVNGGM 245

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  178 bits (453), Expect = 1e-55
 Identities = 87/246 (35%), Positives = 140/246 (56%), Gaps = 9/246 (3%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVCH 69
             K A+VT +++GIG  IA +L  EG +V V+    K   EAVV+ +KA+G++   +  +
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQAN 62

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSILL 128
           V++  + K +I + + +FG +DV+V+NA      D++L + KE   D + D N+K     
Sbjct: 63  VADADEVKAMIKEVVSQFGSLDVLVNNAGIT--RDNLLMRMKEQEWDDVIDTNLKGVFNC 120

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
           +Q A P +  Q+  +++ +SS+ G       A Y  TK  ++GLTK+ A E+A     VN
Sbjct: 121 IQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVN 180

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
            VAPGF+ +   + +  +D +++ +     L R G   D+A   AFLASD A YITG+T+
Sbjct: 181 AVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTI 238

Query: 246 VVAGGM 251
            V GGM
Sbjct: 239 HVNGGM 244

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  178 bits (453), Expect = 1e-55
 Identities = 52/257 (20%), Positives = 102/257 (39%), Gaps = 20/257 (7%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERL---GLEGASVVVSSRKQKNVDEAVVKLKAR--GI 61
           A      V ++T +++G G  +A +L      G+ ++VS+R +  + +   +L A+   +
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFG----KIDVVVSNAAA--NPSVDSILQTKESVLD 115
           +V+     +      + L++   E       +  ++++NAA   + S   +     + ++
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 116 KLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT 171
             W +N+ S + L        Q       +VV ISS+   QP     +Y   K A   L 
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 172 KALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDG---VRQTIEQNTLLNRLGTTRDMAAA 228
           + LAAE  P  RV   APG +     +          +R  +++      L      A  
Sbjct: 181 QVLAAE-EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK 239

Query: 229 AAFLASDDASYITGETL 245
              L   D ++ +G  +
Sbjct: 240 LLGLLQKD-TFQSGAHV 255

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  177 bits (451), Expect = 2e-55
 Identities = 37/243 (15%), Positives = 76/243 (31%), Gaps = 26/243 (10%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
               K  +V   +  +G  + +    +  + +    ++    +                 
Sbjct: 19  SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFT------------I 66

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
             S  ++ K++I +   K  K+D  V  A      ++        +  + D+N+ S+   
Sbjct: 67  KDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFAS 126

Query: 129 LQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT---RVN 185
               A  L +G   VL  + A     S M  YG TK A   + K LA+E           
Sbjct: 127 AHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSL 186

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA-AFLASDDASYITGET 244
            + P  + T            R+ +      +      ++A     +  + D+    G  
Sbjct: 187 GILPVTLDT---------PTNRKYMSDAN-FDDWTPLSEVAEKLFEWSTNSDSRPTNGSL 236

Query: 245 LVV 247
           +  
Sbjct: 237 VKF 239

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  177 bits (451), Expect = 3e-55
 Identities = 79/259 (30%), Positives = 115/259 (44%), Gaps = 17/259 (6%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV-- 63
           M  R +  +A+VT +  GIG  ++ RL  EGA+V      +    E V  L   G +   
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60

Query: 64  -----IGVVCHVSNGQQRKNLINQTIEKFGKI-DVVVSNAAANPSVDSILQT-KESVLDK 116
                      VS  +  + L+ Q    F +   VVVS A      D  L    E   DK
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT--QDEFLLHMSEDDWDK 118

Query: 117 LWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
           +  +N+K + L+ Q AA  L       S++ ISSI G         Y  +K  ++GLT+ 
Sbjct: 119 VIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQT 178

Query: 174 LAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL 232
            A E+     R N V PGF+ T   + +     V   I +   +  LG   D+A   AFL
Sbjct: 179 AARELGRHGIRCNSVLPGFIATPMTQKV--PQKVVDKITEMIPMGHLGDPEDVADVVAFL 236

Query: 233 ASDDASYITGETLVVAGGM 251
           AS+D+ YITG ++ V GG+
Sbjct: 237 ASEDSGYITGTSVEVTGGL 255

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  176 bits (449), Expect = 3e-55
 Identities = 34/248 (13%), Positives = 78/248 (31%), Gaps = 21/248 (8%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           MA   + +  +V      +G    +        V         +D    +  +  + V  
Sbjct: 1   MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVAS-------IDVVENEEASASVIVKM 53

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
                    Q    +   +    K+D ++  A      ++  ++     D +W  ++ +S
Sbjct: 54  TDSFTEQADQVTAEV-GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTS 112

Query: 126 ILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT--- 182
            +    A  HL++G  + L  + A       M  YG+ K A+  L ++LA + +      
Sbjct: 113 TISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 172

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
               V P  + T            R+++ +    +       +        + +    +G
Sbjct: 173 AAIAVLPVTLDT---------PMNRKSMPEAD-FSSWTPLEFLVETFHDWITGNKRPNSG 222

Query: 243 ETLVVAGG 250
             + V   
Sbjct: 223 SLIQVVTT 230

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  175 bits (447), Expect = 8e-55
 Identities = 39/252 (15%), Positives = 78/252 (30%), Gaps = 20/252 (7%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE-AVVKLKARGIEVIGVV 67
               K  I  A+  GIG   +  L        V   + +N    A +K     + +    
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 68  CHVS-NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
             V+    + K L+ +  ++   +D++++ A        I    +  +++   IN    +
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAG-------I--LDDHQIERTIAINFTGLV 112

Query: 127 LLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
                      K     G  +  I S+ G+     + +Y  +K A++  T +LA      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
                 + PG   T       S   V   + +  L +   T+             +    
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANK--- 229

Query: 241 TGETLVVAGGMP 252
            G    +  G  
Sbjct: 230 NGAIWKLDLGTL 241

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  174 bits (443), Expect = 5e-54
 Identities = 69/248 (27%), Positives = 126/248 (50%), Gaps = 11/248 (4%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
            +  G+ A+VT +T GIG  IA     +GA V +   ++  + E    L   G +V    
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFS 79

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSI 126
            ++S+ +  K L      +   ID++V+NA      D +  + ++   D +  +N+ ++ 
Sbjct: 80  ANLSDRKSIKQLAEVAEREMEGIDILVNNAGIT--RDGLFVRMQDQDWDDVLAVNLTAAS 137

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            L ++    +  ++   ++ I+SI G         Y   K  L+G +KALA E+A  +  
Sbjct: 138 TLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNIT 197

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE 243
           VNC+APGF+ +   + +  N+  ++ I     + R+G   ++A A  +LASD+A+Y+TG+
Sbjct: 198 VNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQ 255

Query: 244 TLVVAGGM 251
           TL + GGM
Sbjct: 256 TLHINGGM 263

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  174 bits (442), Expect = 5e-54
 Identities = 42/245 (17%), Positives = 90/245 (36%), Gaps = 9/245 (3%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M+   +     V  +   IG  IA++   EG +V    R  + +   V +++A G  ++ 
Sbjct: 1   MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVA 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
                 N  +    +    +    ++V + N  AN +   IL+T + V  K+W++   + 
Sbjct: 61  RSLDARNEDEVTAFL-NAADAHAPLEVTIFNVGANVN-FPILETTDRVFRKVWEMACWAG 118

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-- 181
            +  +++A  +       +    + A  +  S  A +   K  L  + +++A E+ P   
Sbjct: 119 FVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNI 178

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
              + +    V T +          +   +     + L     +A A   L     S  T
Sbjct: 179 HVAHLIIDSGVDTAWVRERREQMFGK---DALANPDLLMPPAAVAGAYWQLYQQPKSAWT 235

Query: 242 GETLV 246
            E  +
Sbjct: 236 FEMEI 240

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  175 bits (444), Expect = 3e-53
 Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 22/255 (8%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-------VDEAVVKL 56
           +    R  G    +T +++GIG  IA +   +GA++V++++  +        +  A  ++
Sbjct: 37  LPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEI 96

Query: 57  KARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDK 116
           +A G + +  +  V + QQ    + + I+KFG ID++V+NA+A   + + L T    LD 
Sbjct: 97  EAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS-LTNTLDTPTKRLDL 155

Query: 117 LWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQ--SSMAMYGVTKTALLGLTK 172
           + ++N + + L  +   P+L   K + ++ IS      P        Y + K  +     
Sbjct: 156 MMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVL 215

Query: 173 ALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL 232
            +A E   +  VN + P       A  +    G+          ++      +A AA  +
Sbjct: 216 GMAEEFKGEIAVNALWPKTAIHTAAMDMLGGPGIE---------SQCRKVDIIADAAYSI 266

Query: 233 ASDDASYITGETLVV 247
                   TG  ++ 
Sbjct: 267 FQ-KPKSFTGNFVID 280

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  171 bits (437), Expect = 3e-53
 Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 24/264 (9%)

Query: 1   MEKMKMAK-RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKA 58
           M            ++A VT    GIG  I +RL  +G  VV             ++  KA
Sbjct: 1   MAHHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA 60

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL- 117
            G +      +V +    K   ++   + G+IDV+V+NA        I  T++ V  K+ 
Sbjct: 61  LGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAG-------I--TRDVVFRKMT 111

Query: 118 ---WD----INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALL 168
              W      N+ S   + +     +  +    ++ ISS+ G + Q     Y   K  + 
Sbjct: 112 REDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIH 171

Query: 169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAA 227
           G T +LA E+A     VN V+PG++ T   + I     V + I     + RLG+  ++ +
Sbjct: 172 GFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGS 229

Query: 228 AAAFLASDDASYITGETLVVAGGM 251
             A+LAS+++ + TG    + GG+
Sbjct: 230 IVAWLASEESGFSTGADFSLNGGL 253

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  171 bits (436), Expect = 3e-53
 Identities = 74/245 (30%), Positives = 119/245 (48%), Gaps = 10/245 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVCHVS 71
            V +VT +++GIG  IA  LG  G  V+V+  +     E V K ++A G + I     VS
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQT-KESVLDKLWDINVKSSILLLQ 130
                + ++   I+ +G IDVVV+NA      D++L   K+S  D++ D+N+    L  Q
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGIT--RDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 131 DAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
            A   +  ++   ++ I+S+ G       A Y   K  ++G +K  A E A  +  VN V
Sbjct: 120 AATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVV 179

Query: 188 APGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA-SDDASYITGETLV 246
            PGF+ +     +   + + + I     L R G   ++A    FLA S  ASYITG+   
Sbjct: 180 CPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFT 237

Query: 247 VAGGM 251
           + GG+
Sbjct: 238 IDGGI 242

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  169 bits (431), Expect = 1e-52
 Identities = 44/244 (18%), Positives = 96/244 (39%), Gaps = 18/244 (7%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
               IVT +  G+G  +   L   G  V +  R+ + + +  + L   G  VIG+V  ++
Sbjct: 3   LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVADLA 59

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           + +         +E  G  ++V+  A        +       + ++ + N+ S+IL+ Q 
Sbjct: 60  HHEDVDVAFAAAVEWGGLPELVLHCAGTGE-FGPVGVYTAEQIRRVMESNLVSTILVAQQ 118

Query: 132 AAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAP 189
               + ++G  +  + S A    +++ ++Y  +K  + G  ++L AE+     R+  + P
Sbjct: 119 TVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYP 178

Query: 190 GFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF-LASDDASYITGETLVVA 248
             + + F +     D            +   T  D AA     L +  + ++T   +   
Sbjct: 179 SGIRSEFWDNTDHVDP-----------SGFMTPEDAAAYMLDALEARSSCHVTDLFIGRN 227

Query: 249 GGMP 252
            G  
Sbjct: 228 EGHH 231

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  169 bits (430), Expect = 2e-52
 Identities = 70/245 (28%), Positives = 125/245 (51%), Gaps = 10/245 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVV-CHV 70
           + A++T +++GIG  IA RL  +G ++ +   + +   E V +  + RG  ++ V+  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSILLL 129
              +    L++Q  E  G +D +V+NA      D++L + K+   + + + N+ +     
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGIT--RDTLLVRMKDEDWEAVLEANLSAVFRTT 119

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
           ++A   +   +   +V I+S+ G       A Y  +K  L+G T+A+A E A     VN 
Sbjct: 120 REAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNA 179

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV 246
           VAPGF+ T   E +     V++   +     R G   ++A A AFL S+ A YITG+TL 
Sbjct: 180 VAPGFIETEMTERL--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLC 237

Query: 247 VAGGM 251
           V GG+
Sbjct: 238 VDGGL 242

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  169 bits (430), Expect = 3e-52
 Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 19/252 (7%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
             + +    +  +VT   +GIG  IA      G  V ++ R  +  +  +          
Sbjct: 13  GLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL---------- 62

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINV 122
             V C +++ +Q +    +  E  G ++V+++NA    + D +L +  E     + + N+
Sbjct: 63  -AVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGV--TKDQLLMRMSEEDFTSVVETNL 119

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
             +  +++ A   +   K   VVLISS+ G    +  A Y  +K  L+G  ++LA E+  
Sbjct: 120 TGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGS 179

Query: 181 -DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
            +   N VAPGFV T   + +   D  R  I     L R     ++AA   FLASDDASY
Sbjct: 180 RNITFNVVAPGFVDTDMTKVL--TDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASY 237

Query: 240 ITGETLVVAGGM 251
           ITG  + V GG+
Sbjct: 238 ITGAVIPVDGGL 249

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  169 bits (431), Expect = 4e-52
 Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 14/254 (5%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIE 62
           M        ++A+VT +++GIG  IA  L   GA V V+        + VV  + A G E
Sbjct: 21  MTALP-LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE 79

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDIN 121
              V   VS   + + L    IE++G++DV+V+NA      D++L + K      + D+N
Sbjct: 80  AFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGIT--RDTLLLRMKRDDWQSVLDLN 137

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +    L  + AA  +  Q+   ++ I+S+ G       A Y   K  ++GLTK +A E+A
Sbjct: 138 LGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELA 197

Query: 180 P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD-A 237
                VN VAPGF+ T     +       + + +   L R G   ++A    FLA+D  A
Sbjct: 198 SRGITVNAVAPGFIATDMTSELA-----AEKLLEVIPLGRYGEAAEVAGVVRFLAADPAA 252

Query: 238 SYITGETLVVAGGM 251
           +YITG+ + + GG+
Sbjct: 253 AYITGQVINIDGGL 266

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  168 bits (427), Expect = 7e-52
 Identities = 82/253 (32%), Positives = 134/253 (52%), Gaps = 16/253 (6%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
              M     GK +++T ++ GIG  IA  L   G+ V++S   ++ +      LK     
Sbjct: 6   HHHM-IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYT- 63

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWDIN 121
               VC+++N ++     +  I K   +D++V NA      D++  + K+   DK+ DIN
Sbjct: 64  --IEVCNLANKEE----CSNLISKTSNLDILVCNAGIT--SDTLAIRMKDQDFDKVIDIN 115

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           +K++ +L ++A   +  ++   ++ ISSI G       A Y  +K  L+G+TK+L+ E+A
Sbjct: 116 LKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVA 175

Query: 180 P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
                VN VAPGF+ +   + +  N+  R+ I Q   L   G   D+A A AFLAS++AS
Sbjct: 176 TRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNAS 233

Query: 239 YITGETLVVAGGM 251
           YITG+TL V GGM
Sbjct: 234 YITGQTLHVNGGM 246

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  167 bits (426), Expect = 1e-51
 Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 19/255 (7%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
                    F  +  +VT   +GIG  IA+RL  +G  V V+ R                
Sbjct: 4   TATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-----------GAP 52

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSIL-QTKESVLDKLWD 119
             + GV   V++            E  G ++V+VSNA  +   D+ L +  E   +K+ +
Sbjct: 53  KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS--ADAFLMRMTEEKFEKVIN 110

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
            N+  +  + Q A+  +   K   ++ I S++G     + A Y  +K  ++G+ +++A E
Sbjct: 111 ANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARE 170

Query: 178 MAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
           ++  +   N VAPG++ T     +  ++ ++Q   Q     R+GT  ++A   +FLAS+D
Sbjct: 171 LSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASED 228

Query: 237 ASYITGETLVVAGGM 251
           ASYI+G  + V GGM
Sbjct: 229 ASYISGAVIPVDGGM 243

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  167 bits (426), Expect = 1e-51
 Identities = 55/246 (22%), Positives = 85/246 (34%), Gaps = 8/246 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV--CHV 70
            V  +T S  GIG  + E L   G +V+   R Q +++  +     R   V  V+  C  
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGG 61

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQT-KESVLDKLWDINVKSSILLL 129
                              + V V+    +  +D + +            +   ++    
Sbjct: 62  VLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
               P +             +A  Q Q+ +A Y  +K A+  L +    + A    R+N 
Sbjct: 122 AAELPMVEAMLAGDEARAIELAEQQGQTHLA-YAGSKYAVTCLARRNVVDWAGRGVRLNV 180

Query: 187 VAPGFVPT-HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
           VAPG V T               T      L R    R++A A AFL    AS+I G  L
Sbjct: 181 VAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHGSVL 240

Query: 246 VVAGGM 251
            V GGM
Sbjct: 241 FVDGGM 246

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  166 bits (422), Expect = 7e-51
 Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 22/253 (8%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCH 69
             +VA VT    G+G  I+ RL   G +V VS S +  +V   ++  +  G +       
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVD 83

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL----WD----IN 121
           V++ +  +    + +  FGK+DV+++NA        I  T+++   K+    WD     +
Sbjct: 84  VADFESCERCAEKVLADFGKVDVLINNAG-------I--TRDATFMKMTKGDWDAVMRTD 134

Query: 122 VKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
           + +   + +     +  ++   +V I S+ G +     A Y   K  + G TK LA E A
Sbjct: 135 LDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETA 194

Query: 180 P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS 238
                VN V+PG++ T   E +   D +   I     + RLG   ++AA  AFL SDDA 
Sbjct: 195 KRGITVNTVSPGYLATAMVEAV-PQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAG 253

Query: 239 YITGETLVVAGGM 251
           ++TG  L + GGM
Sbjct: 254 FVTGADLAINGGM 266

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  167 bits (424), Expect = 1e-50
 Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 9/245 (3%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
                F G+ A+VT    GIG   A      GA +V+S   Q  +++AV  L+ +G +  
Sbjct: 24  GFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAH 83

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
           GVVC V +  +   L ++     G +DVV SNA    +   + Q        + DI++  
Sbjct: 84  GVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVA-GPLAQMNHDDWRWVIDIDLWG 142

Query: 125 SILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           SI  ++   P L +   G  +   +S AG  P + +  YGV K  ++GL + LA E+ P+
Sbjct: 143 SIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPN 202

Query: 182 T-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
              V+ + P  V T          G    +         G    +      +++DD + +
Sbjct: 203 GIGVSVLCPMVVETKLVSNSERIRGADYGMSA----TPEGAFGPLPTQDESVSADDVARL 258

Query: 241 TGETL 245
           T + +
Sbjct: 259 TADAI 263

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  162 bits (413), Expect = 9e-50
 Identities = 46/244 (18%), Positives = 95/244 (38%), Gaps = 22/244 (9%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQKNVDEAVVKLKARGIEVIG 65
            + ++T + +GIG  IA                +V+SSR   ++++  ++ +A G     
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   +S+    + L    +E++G ID +V+NA       ++    E   D   + N+K +
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRF-GALSDLTEEDFDYTMNTNLKGT 121

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
             L Q     +  Q    +  I+S+A  +     ++Y ++K    GL + +         
Sbjct: 122 FFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 181

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           R+  V PG V T     +   D ++           +    D+AA         +  +  
Sbjct: 182 RITDVQPGAVYTPMWGKVD--DEMQA---------LMMMPEDIAAPVVQAYLQPSRTVVE 230

Query: 243 ETLV 246
           E ++
Sbjct: 231 EIIL 234

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  159 bits (404), Expect = 3e-48
 Identities = 57/272 (20%), Positives = 91/272 (33%), Gaps = 58/272 (21%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
            + +++    GIG    + L   G  +V          +A             V+  +S 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDI-----RDA------------EVIADLST 44

Query: 73  GQQRKNLINQTIEK-FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
            + RK  I   + K    +D +V  A   P           VL  +  +N   +  L+  
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTK--------VLGNVVSVNYFGATELMDA 96

Query: 132 AAPHLQKG--SSVVLISSIAGYQ----------------------------PQSSMAMYG 161
             P L+KG   + V+ISS+A                                Q     Y 
Sbjct: 97  FLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156

Query: 162 VTKTALLGLTKALAAEMAPD-TRVNCVAPGFVPTH-FAEYITSNDGVRQTIEQNTLLNRL 219
            +K AL    +  AA       R+N +APG   T      +          +    + R 
Sbjct: 157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRR 216

Query: 220 GTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
               +MA+  AFL S  ASY+ G  +V+ GG+
Sbjct: 217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  158 bits (401), Expect = 4e-48
 Identities = 44/246 (17%), Positives = 89/246 (36%), Gaps = 26/246 (10%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
                IV      +G  I E     G +V+       +  ++ +           V  + 
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNI----------LVDGNK 51

Query: 71  SNGQQRKNLINQTIE--KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
           +  +Q ++++ QT    +  ++D V   A       +  +      D +   +V SS + 
Sbjct: 52  NWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 111

Query: 129 LQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA---PDTRVN 185
            + A  HL+ G  + L  + A   P  SM  YG+ K A+  LT +LAA+ +    ++ V 
Sbjct: 112 AKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVL 171

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY-ITGET 244
            + P  + T            R+ +  N   +       ++       ++ +S   +G  
Sbjct: 172 TIMPVTLDT---------PMNRKWMP-NADHSSWTPLSFISEHLLKWTTETSSRPSSGAL 221

Query: 245 LVVAGG 250
           L +   
Sbjct: 222 LKITTE 227

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  163 bits (414), Expect = 8e-48
 Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 34/262 (12%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
             K   GKVA+VT + +GIG  IAE    +GA+VV             +K  A  +    
Sbjct: 207 WDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA---AEDLKRVADKVGGTA 263

Query: 66  VVCHVSNGQQRKNLINQTIEKFG-KIDVVVSNAAANPSVDSILQTKESVLDKL------- 117
           +   V+       +     E  G K+D++V+NA        I  T+    DKL       
Sbjct: 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAG-------I--TR----DKLLANMDEK 310

Query: 118 -WD----INVKSSILLLQDAAPH--LQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL 170
            WD    +N+ +   L +    +  + +G  V+ +SS+AG         Y  TK  ++GL
Sbjct: 311 RWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGL 370

Query: 171 TKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA 229
            +ALA  +A     +N VAPGF+ T   E I      R+   +   L + G   D+A   
Sbjct: 371 AEALAPVLADKGITINAVAPGFIETKMTEAI--PLATREVGRRLNSLFQGGQPVDVAELI 428

Query: 230 AFLASDDASYITGETLVVAGGM 251
           A+ AS  ++ +TG T+ V G  
Sbjct: 429 AYFASPASNAVTGNTIRVCGQA 450

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  156 bits (397), Expect = 2e-47
 Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 19/257 (7%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG---IE 62
           M+   Q  +AI+T ++QGIG  IA  L  +G  VV+ +R ++N+++   ++        E
Sbjct: 1   MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQE 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
            I +   +++  +    I    +K+G +D++V+ AA     D  L        K+ +INV
Sbjct: 61  PIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFM--DGSLSEPVDNFRKIMEINV 118

Query: 123 KSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            +   +L+     +  QK   +  ++S A     +   +YG TK ALLGL ++L  E+AP
Sbjct: 119 IAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAP 178

Query: 181 DT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA-S 238
              RV  + PG+V T  A+                    +    D+      L +     
Sbjct: 179 LGIRVTTLCPGWVNTDMAK----------KAGTPFKDEEMIQPDDLLNTIRCLLNLSENV 228

Query: 239 YITGETLVVAGGMPSRL 255
            I      +   +    
Sbjct: 229 CIKDIVFEMKKSIIEGH 245

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  154 bits (391), Expect = 1e-45
 Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 23/258 (8%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GI 61
           M + K F G+ A VT    G+G G+  +L  +G  V ++  +Q ++D+A+  L+A   G 
Sbjct: 1   MSL-KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGP 59

Query: 62  EVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDIN 121
           EV+GV   V++ +  K   ++   +FG + ++ +NA  N     I ++     D L  +N
Sbjct: 60  EVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLF-QPIEESSYDDWDWLLGVN 118

Query: 122 VKSSILLLQDAAPHL--------QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA 173
           +   +  +    P +        QKG  VV  +S+A +    S  +Y  TK A+ GL+++
Sbjct: 119 LHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSES 178

Query: 174 LAAEMAPDT-RVNCVAPGFVPTHFAEYITSNDGV---------RQTIEQNTLLNRLGTTR 223
           L   +      V+ + PG V ++                    +  +E+   ++  G   
Sbjct: 179 LHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEP 238

Query: 224 DMAAAAAFLA-SDDASYI 240
           D+  A    A   +  +I
Sbjct: 239 DVIGARVIEAMKANRLHI 256

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  147 bits (372), Expect = 3e-43
 Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 8/211 (3%)

Query: 1   MEKMKMAKRFQGKVAIVT-ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR 59
           + +    +  QGK  IVT AS  GIG  +A  L   GA VVV++R ++ + + V      
Sbjct: 17  LNEEFRPEMLQGKKVIVTGASK-GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL 75

Query: 60  G-IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
           G      +   + +    +  + Q  +  G +D+++ N   N S  ++       + K  
Sbjct: 76  GAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTS-LNLFHDDIHHVRKSM 134

Query: 119 DINVKSSILLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           ++N  S ++L   A P L++ + S+V++SS+AG      +A Y  +K AL G   ++  E
Sbjct: 135 EVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 194

Query: 178 MAPDT---RVNCVAPGFVPTHFAEYITSNDG 205
            +       +     G + T  A    S   
Sbjct: 195 YSVSRVNVSITLCVLGLIDTETAMKAVSGIV 225

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  145 bits (369), Expect = 9e-43
 Identities = 62/268 (23%), Positives = 106/268 (39%), Gaps = 23/268 (8%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
            M   K+F+G  AIV+    G+G     RL  +G  VV++    +       +L   G  
Sbjct: 21  SMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNR 77

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW---- 118
              V  +V++       I    +       VV++     +   + +         +    
Sbjct: 78  AEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTI 137

Query: 119 DINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGYQPQSSMAMYGVTKTALLGL 170
           D+ +  +  + +  A  +            ++VL +SIAGY+ Q     Y   K  ++GL
Sbjct: 138 DLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGL 197

Query: 171 TKALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDMAAA 228
           T A A +++    RVN +APG + T   E +   +        N     RLGT  + A A
Sbjct: 198 TIAAARDLSSAGIRVNTIAPGTMKTPIMESVG--EEALAKFAANIPFPKRLGTPDEFADA 255

Query: 229 AAFLASDDASYITGETLVVAGG--MPSR 254
           AAFL ++   YI GE + + G      +
Sbjct: 256 AAFLLTN--GYINGEVMRLDGAQRFTPK 281

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  139 bits (352), Expect = 4e-41
 Identities = 39/236 (16%), Positives = 72/236 (30%), Gaps = 37/236 (15%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
               ++  ++  +G  + ERL  + A V+ + R   +V   +  + +             
Sbjct: 3   AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDS------------- 48

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
                   I +  E+ GK+D +VS   +      + +             +   I L+  
Sbjct: 49  --------IKKMYEQVGKVDAIVSATGSAT-FSPLTELTPEKNAVTISSKLGGQINLVLL 99

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGF 191
               L    S  L + I    P    A   +   A+    K+ A EM    R+N V+P  
Sbjct: 100 GIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNV 159

Query: 192 VPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV 247
           +   + +     +G                    A  A           TGE+  V
Sbjct: 160 LEESWDKLEPFFEGFLPV--------------PAAKVARAFEKSVFGAQTGESYQV 201

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  136 bits (344), Expect = 4e-39
 Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 7/201 (3%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           K   G++ ++T +  GIG   A       + +V+    +  ++E   K K  G +V   V
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
              SN +   +   +   + G + ++V+NA    +   +  T++  ++K +++NV +   
Sbjct: 87  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYT-SDLFATQDPQIEKTFEVNVLAHFW 145

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT--- 182
             +   P +       +V ++S AG+     +  Y  +K A +G  K L  E+A      
Sbjct: 146 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 205

Query: 183 -RVNCVAPGFVPTHFAEYITS 202
            +  C+ P FV T F +  ++
Sbjct: 206 VKTTCLCPNFVNTGFIKNPST 226

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  135 bits (343), Expect = 2e-38
 Identities = 67/262 (25%), Positives = 103/262 (39%), Gaps = 26/262 (9%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---------SSRKQKNVDEAVVK-LKA 58
              G+V IVT +  GIG   A     EGA VVV         S     +  ++VV  + A
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
            G E +    +V++  Q   LI   +E FG +DV+V+NA        I  T E   D + 
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDR-MIANTSEEEFDAVI 142

Query: 119 DINVKSSILLLQDAAPHL--------QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL 170
            +++K     ++ AA +              ++  SS AG Q       Y   K  +  L
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATL 202

Query: 171 TKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA 229
           T   AAEM      VN +AP    T   E + +     + +             +++   
Sbjct: 203 TLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFA-----EMMATQDQDFDAMAPENVSPLV 256

Query: 230 AFLASDDASYITGETLVVAGGM 251
            +L S +A  +TG+   V GG 
Sbjct: 257 VWLGSAEARDVTGKVFEVEGGK 278

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  132 bits (335), Expect = 5e-38
 Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 24/266 (9%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M M  + + +V IVT ++ G+G  +   L  EGA+V+    K    +E   +L   G  V
Sbjct: 1   MVM--QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAV 55

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD---KLWDI 120
                 V+N       +    ++FG +  +V+ A   P    + ++    LD   +   +
Sbjct: 56  RFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAV 115

Query: 121 NVKSSILLLQDAAPHLQKGS--------SVVLISSIAGYQPQSSMAMYGVTKTALLGLTK 172
           N+  +  +++ AA  + +G          +V  +SIA +  Q   A Y  +K  +  LT 
Sbjct: 116 NLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTL 175

Query: 173 ALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDMAAAAA 230
             A E+A    RV  +APG   T     +     V+  +  +     RLG   + AA   
Sbjct: 176 PAARELARFGIRVVTIAPGIFDTPMMAGMP--QDVQDALAASVPFPPRLGRAEEYAALVK 233

Query: 231 FLASDDASYITGETLVVAGG--MPSR 254
            +  +    + GE + + G   M  R
Sbjct: 234 HICENT--MLNGEVIRLDGALRMAPR 257

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  132 bits (335), Expect = 6e-38
 Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 24/266 (9%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           M         +G VA++T    G+G   AERL  +GAS V+        +    KL   G
Sbjct: 3   MAAACR--SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---G 57

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVL-----D 115
              +     V++ +  +  +     KFG++DV V+ A    +  +    K          
Sbjct: 58  NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQ 117

Query: 116 KLWDINVKSSILLLQDAAPHLQKGS--------SVVLISSIAGYQPQSSMAMYGVTKTAL 167
           ++ D+N+  +  +++  A  + +           ++  +S+A ++ Q   A Y  +K  +
Sbjct: 118 RVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGI 177

Query: 168 LGLTKALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDM 225
           +G+T  +A ++AP   RV  +APG   T     +   + V   +       +RLG   + 
Sbjct: 178 VGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEY 235

Query: 226 AAAAAFLASDDASYITGETLVVAGGM 251
           A     +   +  ++ GE + + G +
Sbjct: 236 AHLVQAII--ENPFLNGEVIRLDGAI 259

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  130 bits (328), Expect = 2e-36
 Identities = 60/264 (22%), Positives = 100/264 (37%), Gaps = 29/264 (10%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---------SSRKQKNVDEAVV 54
           M    RF G+V +VT +  G+G   A      GA VVV           +     D+ V 
Sbjct: 1   MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVE 60

Query: 55  KLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVL 114
           +++ RG + +     V  G+    L+   ++ FG+IDVVV+N A      S  +  +   
Sbjct: 61  EIRRRGGKAVANYDSVEAGE---KLVKTALDTFGRIDVVVNN-AGILRDRSFSRISDEDW 116

Query: 115 DKLWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK 172
           D +  ++++ S  + + A  H+  Q    +++ +S +G       A Y   K  LLGL  
Sbjct: 117 DIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLAN 176

Query: 173 ALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF 231
            L  E    +   N +AP    +   E +   D V                  +A    +
Sbjct: 177 TLVIEGRKNNIHCNTIAPNAG-SRMTETVMPEDLVEA-----------LKPEYVAPLVLW 224

Query: 232 LASDDASYITGETLVVAGGMPSRL 255
           L  +      G    V  G   +L
Sbjct: 225 LCHESC-EENGGLFEVGAGWIGKL 247

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  126 bits (319), Expect = 7e-36
 Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 15/207 (7%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           ME MK          ++T +++GIG   A  L  +G  V + +R +    + +  L A  
Sbjct: 1   MEGMK-------GAVLITGASRGIGEATARLLHAKGYRVGLMARDE----KRLQALAAEL 49

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
              + +   V         +    E FG++  +V+NA     +  + +        + D 
Sbjct: 50  EGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWRLVLDT 108

Query: 121 NVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           N+  + L ++ A P L  + G ++V + S+AG  P    A Y  +K  LLGL  A   ++
Sbjct: 109 NLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDL 168

Query: 179 APDT-RVNCVAPGFVPTHFAEYITSND 204
                RV  V PG V T FA       
Sbjct: 169 REANVRVVNVLPGSVDTGFAGNTPGQA 195

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  126 bits (318), Expect = 1e-35
 Identities = 51/240 (21%), Positives = 90/240 (37%), Gaps = 17/240 (7%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
             + K+A+VT +T G+G  I + L  +     +         E +  L      V  +  
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNP-----EHLAALAEI-EGVEPIES 55

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            +      +  +   ++    +D +V  AA      +I     +      D+NV     L
Sbjct: 56  DIVKEVLEEGGV-DKLKNLDHVDTLVHAAAVARD-TTIEAGSVAEWHAHLDLNVIVPAEL 113

Query: 129 LQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
            +   P L+  S  V+ I+S AG  P     +Y  +K AL GL  A   E A +  RV+ 
Sbjct: 114 SRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVST 173

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD-DASYITGETL 245
           V+PG   T   + +   D           +      +++A A  F+    + + IT   +
Sbjct: 174 VSPGPTNTPMLQGLM--DSQGTNFRPEIYI----EPKEIANAIRFVIDAGETTQITNVDV 227

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  125 bits (317), Expect = 2e-35
 Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 4/209 (1%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M    QGKVA++T ++ GIG   A  L  EGA+V +++R+ + +     +L A G +V  
Sbjct: 1   MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHV 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   V++ Q     +  T+E  G +D++V+NA     +  +     +   ++ D N+   
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGL 119

Query: 126 ILLLQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-R 183
           + + + A PHL +   +VV +SSIAG     + A+Y  TK  +   ++ L  E+     R
Sbjct: 120 MYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVR 179

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQTIEQ 212
           V  + PG   T    +IT +   ++  EQ
Sbjct: 180 VVVIEPGTTDTELRGHIT-HTATKEMYEQ 207

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  131 bits (332), Expect = 2e-35
 Identities = 59/262 (22%), Positives = 105/262 (40%), Gaps = 29/262 (11%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---------SSRKQKNVDEAVVKL 56
               F+ KV I+T +  G+G   +      GA VVV              K  D  V ++
Sbjct: 2   SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEI 61

Query: 57  KARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDK 116
              G   +    +V +G     ++   ++ FG + V+++NA       S+ +  E     
Sbjct: 62  VKNGGVAVADYNNVLDGD---KIVETAVKNFGTVHVIINNAGILRDA-SMKKMTEKDYKL 117

Query: 117 LWDINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKAL 174
           + D+++  +  + + A P+   QK   +V  SS AG       A Y   K+ALLG  + L
Sbjct: 118 VIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETL 177

Query: 175 AAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA 233
           A E A  + + N +AP    +   E I     + +                +A    +L+
Sbjct: 178 AKEGAKYNIKANAIAP-LARSRMTESIMPPPMLEK-----------LGPEKVAPLVLYLS 225

Query: 234 SDDASYITGETLVVAGGMPSRL 255
           S +   +TG+   VA G  +++
Sbjct: 226 SAEN-ELTGQFFEVAAGFYAQI 246

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  120 bits (303), Expect = 3e-31
 Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 21/258 (8%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
                     + KV ++T +  G+G   A+     GA VVV+  K  +  + V ++KA G
Sbjct: 311 DASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAG 368

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            E       V+   +   +I   I+K+G ID++V+NA       S  +  +   D +  +
Sbjct: 369 GEAWPDQHDVAKDSEA--IIKNVIDKYGTIDILVNNAGILRDR-SFAKMSKQEWDSVQQV 425

Query: 121 NVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           ++  +  L + A P+   ++   ++ I+S +G       A Y  +K  +LGL+K +A E 
Sbjct: 426 HLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEG 485

Query: 179 AP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
           A  + +VN VAP    T     I                  L     +A    +L +DD 
Sbjct: 486 AKNNIKVNIVAP-HAETAMTLSIMREQDK-----------NLYHADQVAPLLVYLGTDDV 533

Query: 238 SYITGETLVVAGGMPSRL 255
             +TGET  + GG     
Sbjct: 534 -PVTGETFEIGGGWIGNT 550

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  124 bits (315), Expect = 3e-35
 Identities = 49/227 (21%), Positives = 93/227 (40%), Gaps = 16/227 (7%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVCH 69
           + KVA++T +++GIG  IA  L  +G ++ + +R    +++   +L + +G+EV      
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           VS  +  +    + +E+FG +DVVV+NA        + +  E    ++ ++N+      L
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLLGVWRTL 119

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
           +     L    G ++V  S ++          Y  TK A   L +    E     R   +
Sbjct: 120 KAFLDSLKRTGGLALVTTSDVSAR-LIPYGGGYVSTKWAARALVRTFQIENPD-VRFFEL 177

Query: 188 APGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
            PG V T+F          +  +             ++A A   L  
Sbjct: 178 RPGAVDTYFGGSKPGKPKEKGYL----------KPDEIAEAVRCLLK 214

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  123 bits (311), Expect = 2e-34
 Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 28/263 (10%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
             +  VA+VT    G+G    +RL   GA VVV   + ++V   +      G        
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL------GDRARFAAA 59

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDINVKSS 125
            V++     + +    E  G + +VV+ A    A   +        +   K+ DIN+  S
Sbjct: 60  DVTDEAAVASAL-DLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118

Query: 126 ILLLQDAAPHLQKGSS----------VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALA 175
             +L+ AA  + K             ++  +S+A +  Q   A Y  +K  ++G+T  +A
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIA 178

Query: 176 AEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDMAAAAAFLA 233
            ++A    RV  +APG   T     +   +  R ++ +     +RLG   +  A A  + 
Sbjct: 179 RDLASHRIRVMTIAPGLFDTPLLASLP--EEARASLGKQVPHPSRLGNPDEYGALAVHII 236

Query: 234 SDDASYITGETLVVAGG--MPSR 254
            +    + GE + + G   M  R
Sbjct: 237 ENP--MLNGEVIRLDGAIRMAPR 257

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  120 bits (304), Expect = 2e-33
 Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 4/196 (2%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
             KV ++T ++ GIG GIA  LG+ GA +++ +R+Q  ++    +++  G   +  V  V
Sbjct: 3   MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDV 62

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
           ++           ++ +G+IDV+V+NA   P +  +   K    +++ D+N+K  +  + 
Sbjct: 63  TDRHSVAAFAQAAVDTWGRIDVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIKGVLWGIG 121

Query: 131 DAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVA 188
              P ++   S  ++ I SI       + A+Y  TK A+  ++  L  E     RV CV 
Sbjct: 122 AVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQESTN-IRVTCVN 180

Query: 189 PGFVPTHFAEYITSND 204
           PG V +  A  IT  +
Sbjct: 181 PGVVESELAGTITHEE 196

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  119 bits (301), Expect = 8e-33
 Identities = 60/243 (24%), Positives = 117/243 (48%), Gaps = 18/243 (7%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IE 62
              +R++ ++A+VT ++ GIG  +A  L  +G  VV  +R   N++E   + K+ G    
Sbjct: 25  PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT 84

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           +I   C +SN +   ++ +    +   +D+ ++NA      D++L    S    ++++NV
Sbjct: 85  LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWKDMFNVNV 143

Query: 123 KSSILLLQDAAPHLQKGSS----VVLISSIAGYQ--PQSSMAMYGVTKTALLGLTKALAA 176
            +  +  ++A   +++ +     ++ I+S++G++  P S    Y  TK A+  LT+ L  
Sbjct: 144 LALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 203

Query: 177 EMAP---DTRVNCVAPGFVPTHFAEYITSNDGVR--QTIEQNTLLNRLGTTRDMAAAAAF 231
           E+       R  C++PG V T FA  +   D  +   T EQ   L       D+A A  +
Sbjct: 204 ELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCL----KPEDVAEAVIY 259

Query: 232 LAS 234
           + S
Sbjct: 260 VLS 262

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  118 bits (298), Expect = 2e-32
 Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 5/208 (2%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
              +            +T +T G G   A R    G S+V++ R+++ +     +L A+ 
Sbjct: 10  SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT 69

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
             V+ +   V +       ++   E+F  +  +++NA      D          D + D 
Sbjct: 70  -RVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDT 128

Query: 121 NVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           N+K  +   +   P L     G+S+V + S+AG  P     +YG TK  +   +  L  +
Sbjct: 129 NIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCD 188

Query: 178 MAPDT-RVNCVAPGFVPTHFAEYITSND 204
           +     RV  + PG   + F+      D
Sbjct: 189 LQGTGVRVTNLEPGLCESEFSLVRFGGD 216

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  123 bits (311), Expect = 2e-32
 Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 41/273 (15%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV---------SSRKQKNVDE 51
           M       R+ G+VA+VT +  G+G   A      GA VVV             Q+  D 
Sbjct: 8   MSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADI 67

Query: 52  AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTK- 110
            V +++  G E +     V +G +   +I   I+ FG++D++V+NA        IL+ + 
Sbjct: 68  VVDEIRKAGGEAVADYNSVIDGAK---VIETAIKAFGRVDILVNNAG-------ILRDRS 117

Query: 111 -ESVLDKLWD----INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVT 163
                ++ W+    +++K S    Q A P++  Q    +++ SS +G         Y   
Sbjct: 118 LVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAA 177

Query: 164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTT 222
           K  L+GL   +A E A  +   N + P    +   E I  +    +              
Sbjct: 178 KMGLIGLANTVAIEGARNNVLCNVIVP-TAASRMTEGILPDILFNE-----------LKP 225

Query: 223 RDMAAAAAFLASDDASYITGETLVVAGGMPSRL 255
           + +A   A+L  +      G  +  A G  ++L
Sbjct: 226 KLIAPVVAYLCHESCE-DNGSYIESAAGWATKL 257

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  117 bits (296), Expect = 2e-32
 Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 32/257 (12%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           + A+VT    G+G   A  L   G  VVV       +D     L+  G ++I V   V+ 
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVV-------LD-----LRREGEDLIYVEGDVTR 50

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNA---AANPSVDSILQTKESVLDKLWDINVKSSILLL 129
            +  +  + +  E    +  VVS A    A   +            ++ ++N+  +  +L
Sbjct: 51  EEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109

Query: 130 QDAAPHLQKGS--------SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           + AA  +++           +V  +S+A ++ Q   A Y  +K  ++ LT   A E+A  
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW 169

Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDMAAAAAFLASDDASY 239
             RV  VAPG   T   + +   +  + ++        RLG   + AA    +  +    
Sbjct: 170 GIRVVTVAPGLFDTPLLQGLP--EKAKASLAAQVPFPPRLGRPEEYAALVLHILENP--M 225

Query: 240 ITGETLVVAGG--MPSR 254
           + GE + + G   M  R
Sbjct: 226 LNGEVVRLDGALRMAPR 242

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  114 bits (288), Expect = 8e-31
 Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 8/208 (3%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERL---GLEGASVVVSSRKQKNVDEAVVKLKAR-- 59
           K A+R   K  ++T ++ GIG   A            +++++R+ + ++E    +     
Sbjct: 26  KAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP 85

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
             +V      ++  ++ K  I    ++F  ID++V+NA      D + Q     +  ++D
Sbjct: 86  NAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFD 145

Query: 120 INVKSSILLLQDAAPHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
            NV + I + Q   P  Q  +S  +V + SIAG     + ++Y  +K A+   T +L  E
Sbjct: 146 TNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKE 205

Query: 178 MAPDT-RVNCVAPGFVPTHFAEYITSND 204
           +     RV  +APG V T F+      +
Sbjct: 206 LINTKIRVILIAPGLVETEFSLVRYRGN 233

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  111 bits (279), Expect = 4e-30
 Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 9/188 (4%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
            + ++T ++ G+G  +A+    EG +  ++ R +  +      L      V      +++
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNN---VGYRARDLAS 58

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
            Q+ + L  Q          VV +A +      + +     +  L + N+ S+I +L++ 
Sbjct: 59  HQEVEQLFEQL---DSIPSTVVHSAGSGYF-GLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 133 APHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPG 190
               +    +VV+I S A  QP++  + Y   K A+ GL +++  E+     ++  V PG
Sbjct: 115 VKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPG 174

Query: 191 FVPTHFAE 198
            + T F E
Sbjct: 175 GMATEFWE 182

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  111 bits (281), Expect = 6e-30
 Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 11/211 (5%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           +M +    K+ ++T ++ GIG  IA R   EG  +++ +R+     E +  L       +
Sbjct: 9   QMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKALNLP--NTL 62

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
                V++       I +  + +G  D +V+NA     +  I   + +   +++D+NV  
Sbjct: 63  CAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLG 121

Query: 125 SILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
            +  +Q     +  +   +++ ISSIAG +     A Y  TK A+  +++ +  E+A   
Sbjct: 122 LLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASN 181

Query: 183 -RVNCVAPGFVPTHFAEYITSNDGVRQTIEQ 212
            RV  +AP  V T    + T +  ++   + 
Sbjct: 182 VRVMTIAPSAVKTELLSHTT-SQQIKDGYDA 211

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  108 bits (273), Expect = 1e-28
 Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 7/188 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KV +VT ++ G G  IAE     G +V+ ++R+ + +D+ V     R      +   V++
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDR---AEAISLDVTD 62

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
           G++   +    + ++G++DV+V+NA     V +  +T E  L  L++++V     L +  
Sbjct: 63  GERIDVVAADVLARYGRVDVLVNNAGRT-QVGAFEETTERELRDLFELHVFGPARLTRAL 121

Query: 133 APHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P +  +   SVV ISS  G    +  + Y  TK AL  L++ LA E+AP   +V  V P
Sbjct: 122 LPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEP 181

Query: 190 GFVPTHFA 197
           G   T+  
Sbjct: 182 GAFRTNLF 189

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  105 bits (265), Expect = 1e-27
 Identities = 48/248 (19%), Positives = 88/248 (35%), Gaps = 53/248 (21%)

Query: 12  GKVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
             VA+VT   +GIG  I   L  L    VV+++R       AV +L+A G+        +
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDI 63

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
            + Q  + L +   +++G +DV+V+NA     V           +     N   +  +  
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQA-EVTMKTNFFGTRDVCT 122

Query: 131 DAAPHLQKGSSVVLISSIAGYQPQSS---------------------------------- 156
           +  P ++    VV +SSI   +   S                                  
Sbjct: 123 ELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 182

Query: 157 -------MAMYGVTKTALLGLTKALAAEMAPDTR-----VNCVAPGFVPTHFAEYITSND 204
                   + YGVTK  +  L++  A +++   +     +N   PG+V T     +    
Sbjct: 183 HQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD----MAGPK 238

Query: 205 GVRQTIEQ 212
             + + E+
Sbjct: 239 ATK-SPEE 245

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score =  105 bits (264), Expect = 3e-27
 Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 25/256 (9%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARGIEVIG 65
           + K  ++   A+ + I FG+A+ L   GA +V +    R +K +++ + +L      +  
Sbjct: 31  ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQ 90

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESVLDKLW 118
               V + ++  N   Q  +  G ID V  S A AN         ++   ++E  L    
Sbjct: 91  --IDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSET---SREGFLLAQ- 144

Query: 119 DINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALA 175
           DI+  S  ++  +A   + +G S+V  + + G   + ++  Y   GV K +L    K LA
Sbjct: 145 DISSYSLTIVAHEAKKLMPEGGSIVATTYLGG---EFAVQNYNVMGVAKASLEANVKYLA 201

Query: 176 AEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
            ++ PD  RVN ++ G + T  A+ +   + + + IE+   L R     ++   AA+L S
Sbjct: 202 LDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLS 261

Query: 235 DDASYITGETLVVAGG 250
           D +S +TGE + V  G
Sbjct: 262 DLSSGVTGENIHVDSG 277

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score =  103 bits (260), Expect = 7e-27
 Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 25/261 (9%)

Query: 6   MAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARG 60
           M    +G+  +V   A+ + I +GIA  L   GA ++ +    R +K+V E    L    
Sbjct: 1   MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRND 60

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESV 113
             ++   C V+N  + +       E+ G I  +    A AN        +++    ++  
Sbjct: 61  SIILP--CDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNT---NRDGF 115

Query: 114 LDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGL 170
           L    +I+  S   +++ A P + +G S+V ++ + G   +  M  Y   GV K +L   
Sbjct: 116 LLAH-NISSYSLTAVVKAARPMMTEGGSIVTLTYLGG---ELVMPNYNVMGVAKASLDAS 171

Query: 171 TKALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA 229
            K LAA++  +  RVN ++ G + T  A+ I+  + + + IE+   L R  T  ++   A
Sbjct: 172 VKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTA 231

Query: 230 AFLASDDASYITGETLVVAGG 250
           AFL SD +  ITGE L V  G
Sbjct: 232 AFLFSDMSRGITGENLHVDSG 252

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score =  103 bits (259), Expect = 7e-27
 Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 27/261 (10%)

Query: 6   MAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARG 60
           +     GK A+V    + + +GF IA +L   GA V +S    R +   ++    L    
Sbjct: 2   LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL 61

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESV 113
           +        V+  ++   L     E FG +D +V + A A         +D+    ++  
Sbjct: 62  L----FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDT---RRQDW 114

Query: 114 LDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGL 170
           L  L +++  S + + + A P L++G  +V ++  A    +  +  Y    + K AL   
Sbjct: 115 LLAL-EVSAYSLVAVARRAEPLLREGGGIVTLTYYAS---EKVVPKYNVMAIAKAALEAS 170

Query: 171 TKALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA 229
            + LA E+ P   RVN ++ G V T  A  I     +   + Q   L R  T  ++    
Sbjct: 171 VRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLG 230

Query: 230 AFLASDDASYITGETLVVAGG 250
            FL S  AS ITGE + V  G
Sbjct: 231 LFLLSPLASGITGEVVYVDAG 251

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score =  102 bits (256), Expect = 2e-26
 Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 26/256 (10%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARGIEVIG 65
            GK  +VT  AS   I +GIA+ +  EGA +  +    + +  V+E   +L +  +    
Sbjct: 8   SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV---- 63

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESVLDKLW 118
           + C V+       +  +  + + K D  V S   A         V+++  T+E       
Sbjct: 64  LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAV--TREGFKIAH- 120

Query: 119 DINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALA 175
           DI+  S + + +     L  GS+++ +S +     + ++  Y   G+ K +L    + +A
Sbjct: 121 DISSYSFVAMAKACRSMLNPGSALLTLSYLGA---ERAIPNYNVMGLAKASLEANVRYMA 177

Query: 176 AEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
             M P+  RVN ++ G + T  A  I     +    E  T + R  T  D+  +AAFL S
Sbjct: 178 NAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS 237

Query: 235 DDASYITGETLVVAGG 250
           D ++ I+GE + V GG
Sbjct: 238 DLSAGISGEVVHVDGG 253

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  100 bits (251), Expect = 3e-26
 Identities = 36/187 (19%), Positives = 76/187 (40%), Gaps = 19/187 (10%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
            ++T +T G+G   A  L  +G  +++S R+   + E   ++ AR      +   +++  
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVGARA-----LPADLADEL 55

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
           + K L+    E+ G +D++V          S+ +    +++++   ++ ++  +L     
Sbjct: 56  EAKALL----EEAGPLDLLVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAFVL----K 106

Query: 135 HL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
           H   QKG+  V   +   Y      A Y   K AL    +A   E+  +   +  V    
Sbjct: 107 HARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPA 166

Query: 192 VPTHFAE 198
           V T    
Sbjct: 167 VATGLWA 173

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  101 bits (253), Expect = 4e-26
 Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 9/196 (4%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSN 72
           + +VT +T G G  I  R   +G  V+ + R+Q    E + +LK   G  +      V N
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVRN 57

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
               + ++     ++  ID++V+NA     ++   +      + + D N K  + + +  
Sbjct: 58  RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAV 117

Query: 133 APHLQKGSS--VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAP 189
            P + + +   ++ I S AG  P +   +YG TK  +   +  L  ++     RV  + P
Sbjct: 118 LPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177

Query: 190 GFVP-THFAEYITSND 204
           G V  T F+      D
Sbjct: 178 GLVGGTEFSNVRFKGD 193

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score =  101 bits (254), Expect = 5e-26
 Identities = 65/256 (25%), Positives = 108/256 (42%), Gaps = 26/256 (10%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKARGIEVIG 65
            GK  ++T   S + I +GIA+    EGA +  +    R +  + E   +  +     + 
Sbjct: 13  DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSE----LV 68

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESVLDKLW 118
             C V++  Q   L       +  +D +V S   A         +D +  T+E+      
Sbjct: 69  FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGL--TRENFRIAH- 125

Query: 119 DINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALA 175
           DI+  S   L + A P L   +S++ +S +     + ++  Y   G+ K AL    + LA
Sbjct: 126 DISAYSFPALAKAALPMLSDDASLLTLSYLGA---ERAIPNYNTMGLAKAALEASVRYLA 182

Query: 176 AEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
             +     RVN ++ G + T  A  I S   +   +E N+ L R  T   +  A AFL S
Sbjct: 183 VSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLS 242

Query: 235 DDASYITGETLVVAGG 250
           D AS +T E + V  G
Sbjct: 243 DLASGVTAEVMHVDSG 258

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score =  101 bits (255), Expect = 7e-26
 Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 27/265 (10%)

Query: 2   EKMKMAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKL 56
             M+     +GK  ++   A+ + + +GIA+ +  +GA V ++      +K VD     L
Sbjct: 20  GSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL 79

Query: 57  KARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQT 109
             +    + V C VS+ +   N+     E++G +D VV + A ++ +      VD+   +
Sbjct: 80  GVK----LTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDT---S 132

Query: 110 KESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTA 166
             + L  +  I+  S   +   A P +  G S++ +S       +  +  Y   GV K A
Sbjct: 133 LGNFLTSM-HISCYSFTYIASKAEPLMTNGGSILTLSYYGA---EKVVPHYNVMGVCKAA 188

Query: 167 LLGLTKALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDM 225
           L    K LA ++     RVN ++ G V T  +  I+    +    + N+ L R  T  D+
Sbjct: 189 LEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDV 248

Query: 226 AAAAAFLASDDASYITGETLVVAGG 250
             AA +L SD     TGET+ V  G
Sbjct: 249 GGAALYLLSDLGRGTTGETVHVDCG 273

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score =  101 bits (253), Expect = 7e-26
 Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 27/256 (10%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSS---RKQKNVDEAVVKLKARGIEVIG 65
           +GK  ++   A+ + I +GIA+    +GA++  +      +K V     +L +  +    
Sbjct: 5   KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYV---- 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESVLDKLW 118
               VS  +  K+L N   +  G +D +V S A A         +++   +K +    + 
Sbjct: 61  YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLET---SKSAFNTAM- 116

Query: 119 DINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALA 175
           +I+V S I L     P L  G+SV+ +S +        MA Y   G+ K AL    + LA
Sbjct: 117 EISVYSLIELTNTLKPLLNNGASVLTLSYLGS---TKYMAHYNVMGLAKAALESAVRYLA 173

Query: 176 AEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
            ++     RVN ++ G + T  +  I     + +  E N  L +  +  ++  A  +L S
Sbjct: 174 VDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLS 233

Query: 235 DDASYITGETLVVAGG 250
             +S ++GE   V  G
Sbjct: 234 SLSSGVSGEVHFVDAG 249

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score =  101 bits (254), Expect = 8e-26
 Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 27/263 (10%)

Query: 4   MKMAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS---SRKQKNVDEAVVKLKA 58
              +   QGK  ++   A+ + I +GIA+     GA +  +      +K V+    +L A
Sbjct: 23  TAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGA 82

Query: 59  RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKE 111
                +   C V++      +     +K+GK+D +V +   ++        +D+   ++ 
Sbjct: 83  F----VAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDT---SEA 135

Query: 112 SVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALL 168
           +  + +  I+V S   + + A   +  G S++ ++       +  M  Y   GV K AL 
Sbjct: 136 NFTNTM-LISVYSLTAVSRRAEKLMADGGSILTLTYYGA---EKVMPNYNVMGVAKAALE 191

Query: 169 GLTKALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAA 227
              K LA ++ P   RVN ++ G + T  A  I     + +  E N  L R  T  ++  
Sbjct: 192 ASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGD 251

Query: 228 AAAFLASDDASYITGETLVVAGG 250
              +  SD +  +TGE      G
Sbjct: 252 VGLYFLSDLSRSVTGEVHHADSG 274

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  100 bits (252), Expect = 9e-26
 Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 23/211 (10%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERL---GLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           + +       ++T   +G+G G+ + L         +  + R ++   E    L      
Sbjct: 15  VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHSN 73

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFG--KIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
           +  +   + N      L+           ++V+ +NA   P    I   +   L      
Sbjct: 74  IHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQT 133

Query: 121 NVKSSILLLQDAAPHLQKGSS-------------VVLISSIAG---YQPQSSMAMYGVTK 164
           N    I+L +   P L+K +              ++ +SSI G         M  Y  +K
Sbjct: 134 NTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSK 193

Query: 165 TALLGLTKALAAEMAPD-TRVNCVAPGFVPT 194
           +AL   TK+L+ ++ P       + PG+V T
Sbjct: 194 SALNAATKSLSVDLYPQRIMCVSLHPGWVKT 224

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  100 bits (251), Expect = 3e-25
 Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 17/247 (6%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M M+K    K+ ++T ++ G G   AE L   G  V  S R     + + V+  A     
Sbjct: 1   MVMSK----KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD 56

Query: 64  IGVVCH-----VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLW 118
             V        V +       I+Q I + G+IDV++ NA                  +L+
Sbjct: 57  NDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHM-VFGPAEAFTPEQFAELY 115

Query: 119 DINVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQS-SMAMYGVTKTALLGLTKALA 175
           DINV S+  + + A PH+  QK   ++ ISS +        +A Y   K A+  +    A
Sbjct: 116 DINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYA 175

Query: 176 AEMAP-DTRVNCVAPGFVPT---HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF 231
            E++      + + PG   +   HFA     +D  RQ   +      LG     A AA  
Sbjct: 176 RELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIV 235

Query: 232 LASDDAS 238
               D S
Sbjct: 236 PPDADVS 242

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 99.6 bits (249), Expect = 4e-25
 Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 26/256 (10%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS--SRKQKNVDEAVVKLKARGIEVIGV 66
            GK  ++T   S + I +GIA+ +  EGA +  +   + +  V++   +     +    +
Sbjct: 25  AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAV----L 80

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESVLDKLWD 119
            C V + Q+ K+L  +  + +  +D +V S A A         +D +  T+E       D
Sbjct: 81  PCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCV--TREGFSIAH-D 137

Query: 120 INVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKALA 175
           I+  S   L ++    ++ + +S+V ++ I     + +M  Y   GV K +L    +  A
Sbjct: 138 ISAYSFAALAKEGRSMMKNRNASMVALTYIGA---EKAMPSYNTMGVAKASLEATVRYTA 194

Query: 176 AEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS 234
             +  D  +VN V+ G + T  A  I++   +       + L +     ++    AFL S
Sbjct: 195 LALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCS 254

Query: 235 DDASYITGETLVVAGG 250
           D A+ ITGE + V  G
Sbjct: 255 DMATGITGEVVHVDAG 270

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 98.5 bits (245), Expect = 2e-24
 Identities = 66/319 (20%), Positives = 102/319 (31%), Gaps = 94/319 (29%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
           M +       + + A+VT   +GIGF I ++L   G  VV++ R      EAV KLK   
Sbjct: 1   MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN 60

Query: 61  IE-VIGVVCHVSNGQQ-RKNLINQTIEKFGKIDVVVSNAA-------------------- 98
            E V+     V++      +L +     FGK+D++V+NA                     
Sbjct: 61  HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE 120

Query: 99  ---------ANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSS--VVLISS 147
                      P    ++     + ++   IN      + +   P LQ   S  +V +SS
Sbjct: 121 DSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSS 180

Query: 148 IAGYQPQSSM-------------------------------------------AMYGVTK 164
             G     S                                            A Y  +K
Sbjct: 181 STGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSK 240

Query: 165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRD 224
             L   T+ LA ++ P  +VNCV PG V T     +    G   T E+       G    
Sbjct: 241 ACLNAYTRVLANKI-PKFQVNCVCPGLVKTE----MNYGIGNY-TAEE-------G---- 283

Query: 225 MAAAAAFLASDDASYITGE 243
            A     +A       +G 
Sbjct: 284 -AEHVVRIALFPDDGPSGF 301

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 96.6 bits (241), Expect = 2e-24
 Identities = 47/233 (20%), Positives = 93/233 (39%), Gaps = 31/233 (13%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV--SSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
              +VT + +GIG G+ ++L  +     +  ++R  +   E    +K   + V+ +   V
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SIKDSRVHVLPLT--V 60

Query: 71  SNGQQRKNLINQTIEKFG--KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
           +  +     +++  E  G   + ++++NA    S  +  +   +V+ +  D+N  S +LL
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120

Query: 129 LQDAAPHLQKGSS-------------VVLISSIAG-------YQPQSSMAMYGVTKTALL 168
            Q   P L+  +S             V+ ISS  G          Q  +  Y ++K A+ 
Sbjct: 121 TQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAIN 180

Query: 169 GLTKALAAEMAPD-TRVNCVAPGFVPT---HFAEYITSNDGVRQTIEQNTLLN 217
              + LA ++  D   V    PG+V T        +T      + I     L+
Sbjct: 181 MFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLD 233

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 96.1 bits (240), Expect = 8e-24
 Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSS---RKQKNVDEAVVKLKARGIEVIG 65
           +GK A++T  A+ + I +GIA+    EGA +  +    + +K V E      +  +    
Sbjct: 20  EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV---- 75

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVV-SNAAANPS------VDSILQTKESVLDKLW 118
           V C VS  +  KNL     E +G +D++V S A A         +D+   ++E     + 
Sbjct: 76  VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDT---SREGFKIAM- 131

Query: 119 DINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTKAL 174
           DI+V S I L ++  P ++ +  ++V +S       +  +  Y   G+ K AL    + L
Sbjct: 132 DISVYSLIALTRELLPLMEGRNGAIVTLSYYGA---EKVVPHYNVMGIAKAALESTVRYL 188

Query: 175 AAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA 233
           A ++A    R+N ++ G V T  A  IT    + +   +     +  T  D+   A FL 
Sbjct: 189 AYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLC 248

Query: 234 SDDASYITGETLVVAGG 250
           SD A  ITGE + V  G
Sbjct: 249 SDWARAITGEVVHVDNG 265

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 94.4 bits (235), Expect = 5e-23
 Identities = 67/279 (24%), Positives = 105/279 (37%), Gaps = 40/279 (14%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS------------------------SR 44
           +GK A +   A   G G+ +A+ L   GA ++V                           
Sbjct: 7   RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPD 66

Query: 45  KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI--------EKFGKIDVVVSN 96
                 + V  L A       V   V   ++     N T+        + FG ID++V +
Sbjct: 67  GSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHS 126

Query: 97  AAANPSVD-SILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--P 153
            A  P V   +L+T           +  S + LL    P +  G + + ++ IA  +  P
Sbjct: 127 LANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP 186

Query: 154 QSSMAMYGVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPTHFAEYITSNDGVRQTIE 211
                M    K AL   T+ LA E       RVN ++ G + +  A+ I   D + +   
Sbjct: 187 GYGGGM-SSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSY 245

Query: 212 QNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGG 250
            N  + +  T  ++  AAAFL S  AS ITG T+ V  G
Sbjct: 246 NNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG 284

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 92.5 bits (230), Expect = 3e-22
 Identities = 70/285 (24%), Positives = 106/285 (37%), Gaps = 46/285 (16%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS-----------SRKQKNVDEAVVKLK 57
           +G+ A V   A + G G+ IA+ L   GA V +            S +   +DE      
Sbjct: 8   RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPD 67

Query: 58  ARGIEVIGVV-------------CHVSNGQQRKNLINQTI--------EKFGKIDVVVSN 96
              IE  GV                + + ++   +   TI        +  G ID++V +
Sbjct: 68  GSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHS 127

Query: 97  AAANPSVD-SILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--P 153
            A  P V   +L+T           +  S + LLQ   P + +G S V +S +A  +  P
Sbjct: 128 LANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVP 187

Query: 154 QSSMAMYGVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPTHFAEYITSNDGVR---- 207
                M    K AL   T+ LA E       RVN ++ G + +  A  I  +        
Sbjct: 188 GYGGGM-SSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDY 246

Query: 208 --QTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGG 250
                  N  L R   + D+  AA FL S  A  ++G TL V  G
Sbjct: 247 AIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG 291

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 86.1 bits (214), Expect = 3e-20
 Identities = 53/270 (19%), Positives = 93/270 (34%), Gaps = 32/270 (11%)

Query: 6   MAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           M     GK  +V+   +   I F IA     +GA +V++   +  + + +         +
Sbjct: 1   MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPL 60

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFG---KIDVVV-SNAAANPS---VDSILQT-KESVLD 115
           +     V N +   +L  +  E  G   K+D VV S      +   ++         V  
Sbjct: 61  L--ELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSK 118

Query: 116 KLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY---GVTKTALLGLTK 172
            +  I+  S   + +   P +  G S+V +     + P  +M  Y    V K+AL  + +
Sbjct: 119 GI-HISAYSYASMAKALLPIMNPGGSIVGMD----FDPSRAMPAYNWMTVAKSALESVNR 173

Query: 173 ALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQT----------IEQNTLLNRLGT 221
            +A E      R N VA G + T     I       +            +Q   +     
Sbjct: 174 FVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMK 233

Query: 222 T-RDMAAAAAFLASDDASYITGETLVVAGG 250
               +A     L SD     TG+ +   GG
Sbjct: 234 DATPVAKTVCALLSDWLPATTGDIIYADGG 263

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 83.7 bits (207), Expect = 4e-19
 Identities = 73/304 (24%), Positives = 109/304 (35%), Gaps = 59/304 (19%)

Query: 6   MAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVS--------------------- 42
           +    +GK A V   A + G G+ I + L   GA V+V                      
Sbjct: 3   LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQD 62

Query: 43  ----------------SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI-- 84
                            +    V + +  L A       V   VS+ ++   +   TI  
Sbjct: 63  SFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISE 122

Query: 85  ------EKFGKIDVVVSNAAANPSVD-SILQTKESVLDKLWDINVKSSILLLQDAAPHLQ 137
                    G+ID++V + A  P V   +LQT           +  S + LLQ   P ++
Sbjct: 123 VAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMK 182

Query: 138 KGSSVVLISSIAGYQ--PQSSMAMYGVTKTALLGLTKALAAEMAPD--TRVNCVAPGFVP 193
           +G S + +S IA  +  P     M    K AL    + LA E       RVNC++ G + 
Sbjct: 183 EGGSALALSYIASEKVIPGYGGGM-SSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK 241

Query: 194 THFAEYITSN------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV 247
           +  A  I         D      E N  L +   + D+  AA FL S  A  +TG TL V
Sbjct: 242 SRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYV 301

Query: 248 AGGM 251
             G+
Sbjct: 302 DNGL 305

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 83.6 bits (207), Expect = 6e-19
 Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 14/196 (7%)

Query: 13  KVAIVT-ASTQGIGFGIAERL---GLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
            V ++T  S+ GIG  +A RL     +   V  + R  K         +A       +  
Sbjct: 3   TVVLITGCSS-GIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 69  H---VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
               V + +       +  E  G++DV+V NA     +  +    E  +  + D+NV  +
Sbjct: 62  LQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNVVGT 118

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DT 182
           + +LQ   P +  +    V++  S+ G        +Y  +K AL GL ++LA  + P   
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 183 RVNCVAPGFVPTHFAE 198
            ++ +  G V T F E
Sbjct: 179 HLSLIECGPVHTAFME 194

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 75.3 bits (185), Expect = 5e-16
 Identities = 53/322 (16%), Positives = 111/322 (34%), Gaps = 83/322 (25%)

Query: 12  GKVAIVT--ASTQGIGFGIAERLGLEGASVV-----------VSSRKQKNVDEAVVKLKA 58
             +  +     T G G+GIA+ L      ++           + + K    D  ++  K 
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 59  RGIEVIGVV---------------------CHVSNGQQRKNLINQTIEKFGKIDVVV-SN 96
           + + ++ ++                      ++      +++ N   +K+GKI+++V S 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 97  AAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--PQ 154
           A A      +L T           +  S I L +     ++  SS++ ++  A  +  P 
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPG 181

Query: 155 SSMAMYGVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPT------------------ 194
               M    K AL   T+ LA  +  +   R+N ++ G + +                  
Sbjct: 182 YGGGM-SSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN 240

Query: 195 -------------------------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA 229
                                      ++  T  D   +  E+   L +   + D+ + A
Sbjct: 241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVA 300

Query: 230 AFLASDDASYITGETLVVAGGM 251
           +FL S ++  ITG+T+ V  G+
Sbjct: 301 SFLLSRESRAITGQTIYVDNGL 322

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 57.2 bits (138), Expect = 8e-10
 Identities = 23/124 (18%), Positives = 38/124 (30%), Gaps = 13/124 (10%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
                   +GK A+V A T  +G   A  L  EGA VV+  RK      A   +  R  +
Sbjct: 110 VKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-K 168

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
           V       ++   R   +            V +  A    +       ++       I +
Sbjct: 169 VNVTAAETADDASRAEAVKG-------AHFVFTAGAIGLELLP-----QAAWQNESSIEI 216

Query: 123 KSSI 126
            +  
Sbjct: 217 VADY 220

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 1e-07
 Identities = 26/203 (12%), Positives = 64/203 (31%), Gaps = 61/203 (30%)

Query: 40  VVSSR------KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV- 92
           ++S          K+     ++L          +       +++ ++ + +E+  +I+  
Sbjct: 45  ILSKEEIDHIIMSKDAVSGTLRL-------FWTLL-----SKQEEMVQKFVEEVLRINYK 92

Query: 93  VVSNAAANPSVDSILQTK--ESVLDKLW-------DINV--KSSILLLQDAAPHLQKGSS 141
            + +          + T+      D+L+         NV      L L+ A   L+   +
Sbjct: 93  FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN 152

Query: 142 VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT 201
           V++     G        + G  KT        +A ++    +V C     +   F  ++ 
Sbjct: 153 VLI----DG--------VLGSGKT-------WVALDVCLSYKVQCKMDFKI---F--WLN 188

Query: 202 SNDGVRQTIE-----QNTLLNRL 219
                  + E        LL ++
Sbjct: 189 L--KNCNSPETVLEMLQKLLYQI 209

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 6e-05
 Identities = 41/265 (15%), Positives = 78/265 (29%), Gaps = 66/265 (24%)

Query: 29  AERLGLEG----------ASVVVSSRKQKNVDEAV--VKLKARG-----IEVIGVVCH-- 69
           A+ + ++G            V +S + Q  +D  +  + LK        +E++  + +  
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI 209

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPS-VDSILQTKESVLDKLWD------INV 122
             N   R +  +    +   I   +     +    + +L     VL  + +       N+
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL-----VLLNVQNAKAWNAFNL 264

Query: 123 KSSILLL-QDAAPHLQKGSSVV-LISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
              ILL  +           V   +S+              +T   +  L      +  P
Sbjct: 265 SCKILLTTRFK--------QVTDFLSAATTTHISLDHHSMTLTPDEVKSLL-LKYLDCRP 315

Query: 181 DT--RVNC-VAPGFVPTHFAEYI------------TSNDGVRQTIEQNTLLNRL--GTTR 223
               R      P    +  AE I             + D +   IE +  LN L     R
Sbjct: 316 QDLPREVLTTNP-RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS--LNVLEPAEYR 372

Query: 224 DM-AAAAAFLASDDASYITGETLVV 247
            M    + F     A +I    L +
Sbjct: 373 KMFDRLSVF--PPSA-HIPTILLSL 394

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 48/252 (19%), Positives = 78/252 (30%), Gaps = 50/252 (19%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            +  ++T +  G+G   A  L   GA+V+++ R  +  + A   +     +V      + 
Sbjct: 16  QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG---QVEVRELDLQ 72

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAA--ANP---SVDSI-LQTKESVLDKLWDINVKSS 125
           +       + +  +     DV+++NA   A P   +VD    Q            N    
Sbjct: 73  DLSS----VRRFADGVSGADVLINNAGIMAVPYALTVDGFESQ---------IGTNHLGH 119

Query: 126 ILLLQDAAPHLQKGSSVVLISSIA----------------GYQPQSSMAMYGVTKTALLG 169
             L     P L     VV +SS+A                 Y P      Y  +K A L 
Sbjct: 120 FALTNLLLPRLT--DRVVTVSSMAHWPGRINLEDLNWRSRRYSP---WLAYSQSKLANLL 174

Query: 170 LTKALA---AEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMA 226
            T  L           R     PG+  T+         G       +     + T  D  
Sbjct: 175 FTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALM---SAATRVVATDADFG 231

Query: 227 AAAA-FLASDDA 237
           A    + AS D 
Sbjct: 232 ARQTLYAASQDL 243

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 44.9 bits (106), Expect = 2e-05
 Identities = 52/303 (17%), Positives = 98/303 (32%), Gaps = 104/303 (34%)

Query: 9   RFQGKVAIVT-ASTQGIGFGIAERLGLEGASVVV-SSRKQKNVDEAVVKLKARGIEVIGV 66
            F+ K  ++T A    IG  + + L   GA VVV +SR      + V     + I     
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSR----FSKQVTDY-YQSI----- 522

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQ---TKESVLDKLWDINVK 123
             +   G +   LI           VV  N  +   V+++++     E      WD++  
Sbjct: 523 --YAKYGAKGSTLI-----------VVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLD-- 567

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM----YGVTKTALLGLTKALAAEMA 179
               ++  AA   Q          +     +S  A       + +  ++G  K   +   
Sbjct: 568 ---AIIPFAAIPEQGI-------ELEHIDSKSEFAHRIMLTNILR--MMGCVKKQKSARG 615

Query: 180 PDTR-VNCVAPGFVPTH--F-------------------------AEYIT---------- 201
            +TR    + P   P H  F                         A  +T          
Sbjct: 616 IETRPAQVILPM-SPNHGTFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTR 674

Query: 202 ------SNDGVRQTIEQNTLLNRLG----TTRDMAAAAAFLASDDASYITGETLVVA--- 248
                 +N+ + + IE      ++G    + ++MA     L + +   +  ++ V+A   
Sbjct: 675 GTGLMSANNIIAEGIE------KMGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLN 728

Query: 249 GGM 251
           GG+
Sbjct: 729 GGL 731

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 23/130 (17%)

Query: 55  KLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF---GKIDVVVSNAAANPSVDSIL---- 107
            L  +GI  I VV ++ +G +  NL++  I  +       + +        V++I     
Sbjct: 65  ALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 124

Query: 108 --QTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQ 154
              T E     + D N + S  LL       ++    +  SS A Y           + +
Sbjct: 125 CSSTTEWDGKYMMDNNYQYSKELLHYCL---EREIPFLYASSAATYGGRTSDFIESREYE 181

Query: 155 SSMAMYGVTK 164
             + ++G +K
Sbjct: 182 KPLNVFGYSK 191

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 37/137 (27%)

Query: 55  KLKARGIEVIGVVCHVSNGQQRKNLINQTI----------------EKFGKIDVVVSNAA 98
            L  +GI  I VV ++ +G +  NL++  I                E+FG ++ +    A
Sbjct: 18  ALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 77

Query: 99  ANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY------- 151
                     T E     + D N + S  LL       ++    +  SS A Y       
Sbjct: 78  -------CSSTTEWDGKYMMDNNYQYSKELLHYCL---EREIPFLYASSAATYGGRTSDF 127

Query: 152 ----QPQSSMAMYGVTK 164
               + +  + +YG +K
Sbjct: 128 IESREYEKPLNVYGYSK 144

>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 22/110 (20%), Positives = 33/110 (30%), Gaps = 2/110 (1%)

Query: 140 SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEY 199
            S VL+S+I     +S     GV       L   +  E +   +    A GF   +    
Sbjct: 113 RSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKD--TAEGFFSANRPGN 170

Query: 200 ITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG 249
             +                 G  R + A      ++D       TLVV G
Sbjct: 171 KVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHG 220

>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 21/115 (18%), Positives = 35/115 (30%), Gaps = 11/115 (9%)

Query: 140 SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEY 199
           +  VLI+++     Q+     G+ K+   G    +A+  A                F  Y
Sbjct: 116 AKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQ------FYRDVPAGPFYGY 169

Query: 200 ITSNDGVRQTIEQNTLLNRLGTTRD--MAAAAAFLASD---DASYITGETLVVAG 249
                   + I  N     +  +         AF  +D   D   I    LV+ G
Sbjct: 170 NRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHG 224

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	255
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	100.0
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.96
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.95
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.95
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.95
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.95
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.95
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.95
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.94
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.94
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.94
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.94
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.94
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.94
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.93
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.93
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.93
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.93
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.93
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.93
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.93
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.93
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.93
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.93
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.93
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.93
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.93
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.93
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.93
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.92
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.92
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.92
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.92
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.92
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.92
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.92
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.92
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.92
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.92
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.91
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.91
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.91
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.91
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.91
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.91
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.91
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.91
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.91
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.9
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.9
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.9
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.9
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.9
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.89
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.89
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.89
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.89
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.88
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.88
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.88
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.88
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.88
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.88
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.88
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.88
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.87
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.87
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.86
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.86
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.86
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.86
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.84
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.83
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.8
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.78
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.78
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.78
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.78
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.77
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.77
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.77
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.72
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.72
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.71
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.69
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.69
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.63
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.49
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.4
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.21
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.06
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.06
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	99.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.96
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.95
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.94
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.91
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.84
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.79
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.76
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.76
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.72
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.7
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.7
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.67
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.67
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.65
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.65
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.65
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.63
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.61
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.56
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.54
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.54
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.53
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.53
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.52
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.47
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.47
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.47
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.45
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.44
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.44
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.43
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.42
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.4
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.39
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.35
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.34
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.31
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.31
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.3
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.29
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	98.25
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.24
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.22
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.21
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	98.19
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	98.19
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.16
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.13
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.12
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.12
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	98.09
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	98.07
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	98.07
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.06
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	98.05
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	98.03
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	98.01
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	98.01
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	98.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.97
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.96
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.96
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.94
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.94
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.93
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.88
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.87
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.86
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.86
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.85
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.84
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.84
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.84
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.82
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.81
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.8
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.8
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.78
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.78
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.77
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.77
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.76
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.74
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.73
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.71
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.7
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.7
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.7
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.7
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.7
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.69
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.66
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.6
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.6
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.58
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.56
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	97.56
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.56
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.56
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.54
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.53
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.53
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.53
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.5
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	97.46
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.41
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.41
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	97.41
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.39
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.36
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.33
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.28
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.28
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.26
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.23
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.23
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.21
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.21
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.21
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.18
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	97.18
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.18
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.13
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.11
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	97.1
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	97.1
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	97.09
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.07
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	97.07
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.03
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.02
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.01
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.01
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.01
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.0
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.97
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.95
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.95
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.92
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.89
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.86
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.85
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.83
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.82
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.82
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.82
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.82
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.81
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	96.79
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.79
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.78
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.76
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.76
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.73
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.73
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.71
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.71
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	96.71
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.69
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.69
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.67
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.67
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.66
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.66
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	96.66
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.65
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.62
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	96.6
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	96.6
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.59
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.59
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.59
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.59
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	96.57
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.57
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	96.54
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.52
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.52
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.52

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=6.4e-62  Score=393.86  Aligned_cols=249  Identities=25%  Similarity=0.403  Sum_probs=235.9

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |+.+++|+||++|||||++|||+++++.|+++|++|++++|+.+.++...+++...+.++.+++||++++++++++++++
T Consensus         1 Ms~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~   80 (255)
T 4g81_D            1 MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKL   80 (255)
T ss_dssp             --CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            55567899999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhh
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      .++||++|+||||||+.. ..++.+.++++|++++++|+.|+|.++|+++|+|.   ++|+||++||..+..+.+...+|
T Consensus        81 ~~~~G~iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y  159 (255)
T 4g81_D           81 DAEGIHVDILINNAGIQY-RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPY  159 (255)
T ss_dssp             HHTTCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHH
T ss_pred             HHHCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhH
Confidence            999999999999999876 68899999999999999999999999999999994   46899999999999999999999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      ++||+|+.+|+|+++.|+.+ |||||+|+||+++|++.......++..++.....|++|+++|+|+|++++||+|+.+++
T Consensus       160 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~  239 (255)
T 4g81_D          160 TAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDY  239 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999999999999 99999999999999999888777888888889999999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      +|||+|.+|||+..
T Consensus       240 iTG~~i~VDGG~~A  253 (255)
T 4g81_D          240 INGQIIYVDGGWLA  253 (255)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCCEEEECCCeEe
Confidence            99999999999864

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=7.8e-61  Score=387.28  Aligned_cols=246  Identities=29%  Similarity=0.463  Sum_probs=227.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++|+||++|||||++|||+++++.|+++|++|++++|+++.++.+.+++...+.++.+++||++++++++++++++.++|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||+.....++.+.++++|++++++|+.|+|+++|+++|+|+  +.|+||++||..+..+.+...+|++||+
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKa  162 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKH  162 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHH
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHH
Confidence            99999999999876567899999999999999999999999999999995  5789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChh--HHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG--VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+.+|+|+++.|+.+ |||||+|+||+++|++.......++  .........|++|+++|+|+|++++||+|+.++++||
T Consensus       163 al~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iTG  242 (254)
T 4fn4_A          163 GLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNG  242 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence            999999999999999 9999999999999998766554433  2233445567899999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      |+|.+|||++.
T Consensus       243 ~~i~VDGG~t~  253 (254)
T 4fn4_A          243 DAVVVDGGLTV  253 (254)
T ss_dssp             CEEEESTTGGG
T ss_pred             CEEEeCCCccc
Confidence            99999999863

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=7.2e-60  Score=385.16  Aligned_cols=243  Identities=31%  Similarity=0.516  Sum_probs=218.1

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      |..+|+||++|||||++|||+++++.|+++|++|++++|+.+.++...+++   +.++..++||++++++++++++++.+
T Consensus        23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~   99 (273)
T 4fgs_A           23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKA   99 (273)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            445699999999999999999999999999999999999998888777665   56788899999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +||++|+||||||... ..++.+.++++|++++++|+.|+|+++|+++|+|++.++||++||..+..+.+...+|++||+
T Consensus       100 ~~G~iDiLVNNAG~~~-~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKa  178 (273)
T 4fgs_A          100 EAGRIDVLFVNAGGGS-MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKA  178 (273)
T ss_dssp             HHSCEEEEEECCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHH
Confidence            9999999999999865 688999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC-----hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-----DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      |+.+|+|+++.|+.+ |||||+|+||+++|++.......     +.....+....|++|+++|+|+|++++||+|+.+++
T Consensus       179 av~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~  258 (273)
T 4fgs_A          179 ALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSF  258 (273)
T ss_dssp             HHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            999999999999999 99999999999999987766433     233445667789999999999999999999999999


Q ss_pred             ccccEEEeCCCcc
Q 025273          240 ITGETLVVAGGMP  252 (255)
Q Consensus       240 ~~G~~i~~dgG~~  252 (255)
                      +|||+|.+|||..
T Consensus       259 iTG~~i~VDGG~s  271 (273)
T 4fgs_A          259 VTGAELFVDGGSA  271 (273)
T ss_dssp             CCSCEEEESTTTT
T ss_pred             ccCCeEeECcChh
Confidence            9999999999975

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.3e-59  Score=377.00  Aligned_cols=243  Identities=30%  Similarity=0.421  Sum_probs=222.8

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |+-.++|+||++|||||++|||+++++.|+++|++|++++|+..  +...+++.+.+.++.+++||++++++++++++  
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~--   76 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT--   76 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST--
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH--
Confidence            45557899999999999999999999999999999999999865  45667777788899999999999999887764  


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhh
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                         ++++|+||||||+.. ..++.+.++++|++++++|+.|+|+++|+++|+|.   ++|+||++||..+..+.+...+|
T Consensus        77 ---~g~iDiLVNNAGi~~-~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y  152 (247)
T 4hp8_A           77 ---DAGFDILVNNAGIIR-RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSY  152 (247)
T ss_dssp             ---TTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHH
T ss_pred             ---hCCCCEEEECCCCCC-CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHH
Confidence               579999999999876 68899999999999999999999999999999984   36899999999999999999999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      ++||+|+.+|+|+++.|+.+ |||||+|+||+++|++.......+...+.+....|++|+++|+|++.+++||+|+.+++
T Consensus       153 ~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~  232 (247)
T 4hp8_A          153 TAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADY  232 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999 99999999999999999887777777777888899999999999999999999999999


Q ss_pred             ccccEEEeCCCcccC
Q 025273          240 ITGETLVVAGGMPSR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      +||++|.+|||+..|
T Consensus       233 iTG~~i~VDGG~~Ar  247 (247)
T 4hp8_A          233 VHGAILNVDGGWLAR  247 (247)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CcCCeEEECcccccC
Confidence            999999999999865

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=5.1e-58  Score=372.44  Aligned_cols=244  Identities=30%  Similarity=0.339  Sum_probs=216.2

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      |+++|+||++|||||++|||+++++.|+++|++|++++|+.+..+ ..+++.+.+.++.+++||++++++++++++++.+
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence            456799999999999999999999999999999999999988755 3455666678999999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +||++|+||||||+..  ....+.+.++|++.+++|+.+++.++|+++|+|+ .+|+||++||..+..+.+...+|++||
T Consensus        80 ~~G~iDiLVNnAGi~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asK  157 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVND--GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASK  157 (258)
T ss_dssp             HHSCCCEEEECCCCCC--CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHHHHHH
T ss_pred             HhCCCCEEEECCCCCC--CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHHHHHH
Confidence            9999999999999864  3345789999999999999999999999999996 578999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC----ChhHHHHHHhhcccC-CCCCHHHHHHHHHHhcCCCCC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQNTLLN-RLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      +|+.+|+|+++.|+.+ |||||+|+||+++|++......    .+..........|++ |+++|+|+|++++||+|+.++
T Consensus       158 aav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~  237 (258)
T 4gkb_A          158 GAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRAS  237 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999 9999999999999999876543    233345566667774 899999999999999999999


Q ss_pred             CccccEEEeCCCcc
Q 025273          239 YITGETLVVAGGMP  252 (255)
Q Consensus       239 ~~~G~~i~~dgG~~  252 (255)
                      ++|||+|.+|||++
T Consensus       238 ~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          238 HTTGEWLFVDGGYT  251 (258)
T ss_dssp             TCCSCEEEESTTTT
T ss_pred             CccCCeEEECCCcc
Confidence            99999999999986

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=6e-58  Score=366.61  Aligned_cols=236  Identities=28%  Similarity=0.434  Sum_probs=210.9

Q ss_pred             ccccc-CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            5 KMAKR-FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         5 ~~~~~-l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      ....+ ++||++|||||++|||+++++.|+++|++|++++|+.+.++.      ....++..++||++++++++++++  
T Consensus         3 ~f~~dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~--   74 (242)
T 4b79_A            3 VFQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE--   74 (242)
T ss_dssp             CBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH--
T ss_pred             CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH--
Confidence            33444 589999999999999999999999999999999999876542      235689999999999999887764  


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHh
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                        ++|++|+||||||+.   .++++.+.++|++++++|+.|+|+++|+++|+|+ ++|+||++||..+..+.+...+|++
T Consensus        75 --~~g~iDiLVNNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~a  149 (242)
T 4b79_A           75 --ALPRLDVLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSA  149 (242)
T ss_dssp             --HCSCCSEEEECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHH
T ss_pred             --hcCCCCEEEECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHH
Confidence              579999999999974   4678899999999999999999999999999996 5789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ||+|+.+|+|+++.|+.+ |||||+|+||+++|||.......++..+.+....|++|+++|+|++++++||+|+.++++|
T Consensus       150 sKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iT  229 (242)
T 4b79_A          150 SKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVT  229 (242)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcc
Confidence            999999999999999999 9999999999999999988877777778888889999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      ||+|.+|||+..
T Consensus       230 G~~l~VDGG~la  241 (242)
T 4b79_A          230 GAVLAVDGGYLC  241 (242)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CceEEECccHhh
Confidence            999999999863

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=6.3e-57  Score=367.70  Aligned_cols=247  Identities=24%  Similarity=0.275  Sum_probs=229.5

Q ss_pred             cccCCCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |++|+||++|||||+|  |||+++++.|+++|++|++++|+++.++.+.+++.+. +.++.+++||++++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4679999999999875  9999999999999999999999999999888888765 458999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhh
Q 025273           84 IEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      .+++|++|+||||||+...   ...+.+.+.++|+..+++|+.+++.+.+.+.++++++|+||++||..+..+.+.+..|
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y  160 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVM  160 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHH
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhh
Confidence            9999999999999997642   3456788899999999999999999999999999999999999999999999999999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      ++||+|+.+|+|+|+.|+.+ |||||+|+||+++|++.......++..+......|++|+++|+|+++.++||+|+.+++
T Consensus       161 ~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~  240 (256)
T 4fs3_A          161 GVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSSG  240 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999 99999999999999998877766777778888899999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      +|||+|.+|||++.
T Consensus       241 iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          241 VTGENIHVDSGFHA  254 (256)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCCEEEECcCHHh
Confidence            99999999999874

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=4.7e-56  Score=357.92  Aligned_cols=231  Identities=25%  Similarity=0.383  Sum_probs=209.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|+||||||++|||+++++.|+++|++|++++|+++.++.+    .+...++.+++||++++++++++++++.++||++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD   77 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADF----AKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID   77 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            59999999999999999999999999999999997765543    34456889999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l  170 (255)
                      +||||||... ..++.+.+.++|++++++|+.|+|.++|++.|+|+ .+|+||++||..+..+.+...+|++||+|+.+|
T Consensus        78 iLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~l  156 (247)
T 3ged_A           78 VLVNNACRGS-KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVAL  156 (247)
T ss_dssp             EEEECCCCCC-CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHHH
Confidence            9999999876 68899999999999999999999999999999986 578999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          171 TKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       171 ~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      +|++|.|++++||||+|+||+++|++....      .+......|++|+++|+|+|+++.||+|+  +++|||+|.+|||
T Consensus       157 tk~lA~ela~~IrVN~I~PG~i~t~~~~~~------~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i~VDGG  228 (247)
T 3ged_A          157 THALAMSLGPDVLVNCIAPGWINVTEQQEF------TQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFITGETIIVDGG  228 (247)
T ss_dssp             HHHHHHHHTTTSEEEEEEECSBCCCC---C------CHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTT
T ss_pred             HHHHHHHHCCCCEEEEEecCcCCCCCcHHH------HHHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCCCCCeEEECcC
Confidence            999999999999999999999999986533      23345567999999999999999999974  6999999999999


Q ss_pred             cccCC
Q 025273          251 MPSRL  255 (255)
Q Consensus       251 ~~~~~  255 (255)
                      ++.|+
T Consensus       229 ~s~r~  233 (247)
T 3ged_A          229 MSKRM  233 (247)
T ss_dssp             GGGCC
T ss_pred             HHHhC
Confidence            98764

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=2.4e-55  Score=357.82  Aligned_cols=240  Identities=24%  Similarity=0.316  Sum_probs=210.0

Q ss_pred             ccccc-cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 025273            4 MKMAK-RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         4 ~~~~~-~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      |.|+. +|+||++|||||++|||+++++.|+++|++|++++|+.++.          ..+..+++||+++++++++++++
T Consensus         2 Mm~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~   71 (261)
T 4h15_A            2 MMIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------LPEELFVEADLTTKEGCAIVAEA   71 (261)
T ss_dssp             CCCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SCTTTEEECCTTSHHHHHHHHHH
T ss_pred             cchhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------CCcEEEEEcCCCCHHHHHHHHHH
Confidence            55653 79999999999999999999999999999999999986531          12334689999999999999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCC-CCh
Q 025273           83 TIEKFGKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQS-SMA  158 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~-~~~  158 (255)
                      +.++||++|+||||||+... ..++.+.++++|++.+++|+.++++++|+++|+|+  +.|+||++||..+..+.+ ...
T Consensus        72 ~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~  151 (261)
T 4h15_A           72 TRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTT  151 (261)
T ss_dssp             HHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCH
T ss_pred             HHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccH
Confidence            99999999999999998643 46789999999999999999999999999999996  578999999999988876 578


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC--------C----hhHHHHHHhhcccCCCCCHHHH
Q 025273          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--------N----DGVRQTIEQNTLLNRLGTTRDM  225 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~--------~----~~~~~~~~~~~~~~~~~~~~d~  225 (255)
                      .|++||+|+.+|+|+++.|+.+ |||||+|+||+++|++......        .    ...........|++|+++|+|+
T Consensus       152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peev  231 (261)
T 4h15_A          152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEV  231 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHH
Confidence            9999999999999999999999 9999999999999998754321        1    1222334456799999999999


Q ss_pred             HHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          226 AAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       226 a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+.+.||+|+.++++|||+|.+|||...
T Consensus       232 A~~v~fLaS~~a~~itG~~i~VDGG~v~  259 (261)
T 4h15_A          232 ANLIAFLASDRAASITGAEYTIDGGTVP  259 (261)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred             HHHHHHHhCchhcCccCcEEEECCcCcc
Confidence            9999999999999999999999999754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=2.5e-52  Score=340.73  Aligned_cols=247  Identities=35%  Similarity=0.534  Sum_probs=226.5

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ++.++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|++++++++++++++.+
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999999999999988888888999999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|+||||||... ..++ +.+.++|++++++|+.|+++++++++|+|+  +.++||++||..++.+.++...|++|
T Consensus        86 ~~g~id~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  163 (256)
T 3gaf_A           86 QFGKITVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSS  163 (256)
T ss_dssp             HHSCCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHH
Confidence            9999999999999876 3555 889999999999999999999999999986  46799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|++.|+++++.|+.+ +||+|+|+||+++|++..... .+..........+.+++++|+|+++.++||+++..++++|
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG  242 (256)
T 3gaf_A          164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISG  242 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccC
Confidence            99999999999999988 999999999999999876554 3445556667788999999999999999999999999999


Q ss_pred             cEEEeCCCcccCC
Q 025273          243 ETLVVAGGMPSRL  255 (255)
Q Consensus       243 ~~i~~dgG~~~~~  255 (255)
                      ++|++|||...+|
T Consensus       243 ~~i~vdgG~~~~~  255 (256)
T 3gaf_A          243 QVLTVSGGGVQEL  255 (256)
T ss_dssp             CEEEESTTSCCC-
T ss_pred             CEEEECCCccccC
Confidence            9999999998765

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.2e-52  Score=345.32  Aligned_cols=248  Identities=24%  Similarity=0.399  Sum_probs=231.7

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +.+++||++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++++|++++++++++++++.+.
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..+..+.++...|+++|
T Consensus       101 ~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  179 (271)
T 4ibo_A          101 GIDVDILVNNAGIQF-RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAK  179 (271)
T ss_dssp             TCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCCCEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHH
Confidence            999999999999876 57788999999999999999999999999999985  467999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +|++.|+++++.|+.+ ||++|+|+||+++|++.......+....+.....+.+++++|+|+++.++||+++..++++|+
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~  259 (271)
T 4ibo_A          180 GGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQ  259 (271)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCc
Confidence            9999999999999988 999999999999999987766556667777888899999999999999999999999999999


Q ss_pred             EEEeCCCcccCC
Q 025273          244 TLVVAGGMPSRL  255 (255)
Q Consensus       244 ~i~~dgG~~~~~  255 (255)
                      +|.+|||+...|
T Consensus       260 ~i~vdGG~~~~l  271 (271)
T 4ibo_A          260 IIYVDGGMLSVL  271 (271)
T ss_dssp             EEEESTTGGGBC
T ss_pred             EEEECCCeeccC
Confidence            999999998764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2e-52  Score=342.87  Aligned_cols=251  Identities=26%  Similarity=0.401  Sum_probs=227.3

Q ss_pred             cccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 025273            3 KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         3 ~~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      +++|+..+++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++++++++++++
T Consensus         2 p~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (264)
T 3ucx_A            2 PGSMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDE   81 (264)
T ss_dssp             -----CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            45666778999999999999999999999999999999999999999999999888888999999999999999999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhH
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      +.+.+|++|+||||||......++.+.+.++|++.+++|+.++++++++++|+|+ .+++||++||..+..+.+.+..|+
T Consensus        82 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  161 (264)
T 3ucx_A           82 TMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYK  161 (264)
T ss_dssp             HHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTCHHHH
T ss_pred             HHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCccHHHH
Confidence            9999999999999999875568889999999999999999999999999999986 468999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---------ChhHHHHHHhhcccCCCCCHHHHHHHHHH
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDGVRQTIEQNTLLNRLGTTRDMAAAAAF  231 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  231 (255)
                      +||+|++.|+++++.|+.+ +||||+|+||+++|++......         .++.........+.+++++|+|+++.+.|
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  241 (264)
T 3ucx_A          162 MAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILF  241 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHH
Confidence            9999999999999999988 9999999999999998765431         23444556677889999999999999999


Q ss_pred             hcCCCCCCccccEEEeCCCccc
Q 025273          232 LASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+++..++++|++|.+|||...
T Consensus       242 L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          242 MASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HcCccccCCCCCEEEECCCccC
Confidence            9999999999999999999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.9e-52  Score=342.24  Aligned_cols=246  Identities=28%  Similarity=0.438  Sum_probs=227.8

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++.. .+.++.++++|++++++++++++++.+
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999999888888866 477999999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      .+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++   +++||++||..++.+.+....|++
T Consensus        95 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  173 (266)
T 4egf_A           95 AFGGLDVLVNNAGISH-PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCT  173 (266)
T ss_dssp             HHTSCSEEEEECCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHH
Confidence            9999999999999876 577888999999999999999999999999999863   679999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +|+|++.|+++++.|+.+ +||+|+|+||+++|++.......+..........|.+++.+|+|+++.++||+++..+++|
T Consensus       174 sK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~it  253 (266)
T 4egf_A          174 SKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMIN  253 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcc
Confidence            999999999999999988 9999999999999999877665566666677778999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |++|.+|||+..
T Consensus       254 G~~i~vdGG~~~  265 (266)
T 4egf_A          254 GVDIPVDGGYTM  265 (266)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECCCccC
Confidence            999999999864

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=8.5e-52  Score=342.06  Aligned_cols=251  Identities=31%  Similarity=0.422  Sum_probs=228.3

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCC---eEEEEEecCCCHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~   80 (255)
                      .+|+.++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.   ++.++++|+++++++++++
T Consensus         3 ~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~   82 (281)
T 3svt_A            3 GSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAV   82 (281)
T ss_dssp             -----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHH
Confidence            3466678999999999999999999999999999999999999999988888876654   8999999999999999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCCh
Q 025273           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMA  158 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~  158 (255)
                      +++.+.+|++|++|||||......++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..+..+.++..
T Consensus        83 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  162 (281)
T 3svt_A           83 DAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFG  162 (281)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCT
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCCh
Confidence            999999999999999999855567889999999999999999999999999999985  467999999999999999999


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      .|++||+|++.|+++++.|+.+ +||+|+|+||+++|++........+.........+.+++++|+|+++.++||+++..
T Consensus       163 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~  242 (281)
T 3svt_A          163 AYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAA  242 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            9999999999999999999988 999999999999999987766666666777778899999999999999999999999


Q ss_pred             CCccccEEEeCCCcccC
Q 025273          238 SYITGETLVVAGGMPSR  254 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~~  254 (255)
                      ++++|++|.+|||...+
T Consensus       243 ~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          243 SFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             TTCCSCEEEESTTGGGS
T ss_pred             CCCCCCEEEeCCChhcc
Confidence            99999999999998764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1.1e-51  Score=336.64  Aligned_cols=243  Identities=30%  Similarity=0.473  Sum_probs=220.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++++|+++.++++++++++.+.+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL   80 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999999998888777666   4589999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      |++|++|||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|+++++||++||..+..+.++...|++||+|+
T Consensus        81 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  159 (255)
T 4eso_A           81 GAIDLLHINAGVSE-LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAAL  159 (255)
T ss_dssp             SSEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHH
Confidence            99999999999876 57888999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCCh----hHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND----GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      +.|+++++.|+.+ |||+|+|+||+++|++.......+    ..........|.+++++|+|+|+.++||+++ .++++|
T Consensus       160 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~~itG  238 (255)
T 4eso_A          160 VSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTTG  238 (255)
T ss_dssp             HHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CTTCCS
T ss_pred             HHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-CcCccC
Confidence            9999999999988 999999999999999875432222    2223445567899999999999999999998 889999


Q ss_pred             cEEEeCCCcccCC
Q 025273          243 ETLVVAGGMPSRL  255 (255)
Q Consensus       243 ~~i~~dgG~~~~~  255 (255)
                      ++|.+|||+..++
T Consensus       239 ~~i~vdGG~~~~l  251 (255)
T 4eso_A          239 AKLAVDGGLGQKL  251 (255)
T ss_dssp             CEEEESTTTTTTB
T ss_pred             CEEEECCCccccC
Confidence            9999999998764

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.7e-51  Score=334.97  Aligned_cols=242  Identities=32%  Similarity=0.468  Sum_probs=225.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++|++|||||++|||++++++|+++|++|+++ +|+.+.++...+++...+.++.++++|++++++++++++++.+.+|+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999986 89998888888888877889999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++  .++||++||..+..+.++...|++||+|+
T Consensus        83 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  161 (258)
T 3oid_A           83 LDVFVNNAASGV-LRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAAL  161 (258)
T ss_dssp             CCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence            999999999765 577889999999999999999999999999999964  57999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.|+++++.|+.+ +||+|+|+||+++|++.......++.........+.+++++|+|+++.+.||+++..++++|++|.
T Consensus       162 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~  241 (258)
T 3oid_A          162 EALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTII  241 (258)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEE
T ss_pred             HHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEE
Confidence            9999999999988 999999999999999988766555566667777899999999999999999999999999999999


Q ss_pred             eCCCccc
Q 025273          247 VAGGMPS  253 (255)
Q Consensus       247 ~dgG~~~  253 (255)
                      +|||+..
T Consensus       242 vdGG~~~  248 (258)
T 3oid_A          242 VDGGRSL  248 (258)
T ss_dssp             ESTTGGG
T ss_pred             ECCCccC
Confidence            9999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.5e-51  Score=334.68  Aligned_cols=243  Identities=32%  Similarity=0.486  Sum_probs=220.8

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |+.++++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.   .+..++++|++++++++++++++
T Consensus         1 M~~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~   77 (248)
T 3op4_A            1 MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG---DNGKGMALNVTNPESIEAVLKAI   77 (248)
T ss_dssp             -CCTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---ccceEEEEeCCCHHHHHHHHHHH
Confidence            455577899999999999999999999999999999999999988887777664   35788999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhH
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      .+.+|++|++|||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..+..+.++...|+
T Consensus        78 ~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  156 (248)
T 3op4_A           78 TDEFGGVDILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYA  156 (248)
T ss_dssp             HHHHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHH
Confidence            999999999999999876 57788999999999999999999999999999985  568999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +||+|++.|+++++.|+.+ +||+|+|+||+++|++....  .+..........+.+++.+|+|+++.+.||+++..+++
T Consensus       157 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~i  234 (248)
T 3op4_A          157 AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYI  234 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCc
Confidence            9999999999999999988 99999999999999987654  33444555667789999999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 025273          241 TGETLVVAGGMP  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      +|++|.+|||+.
T Consensus       235 tG~~i~vdgG~~  246 (248)
T 3op4_A          235 TGETLHVNGGMY  246 (248)
T ss_dssp             CSCEEEESTTSS
T ss_pred             cCcEEEECCCee
Confidence            999999999986

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-51  Score=341.24  Aligned_cols=246  Identities=27%  Similarity=0.399  Sum_probs=218.5

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|++++++++++++++.+.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999999998888777889999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccC--CCCCChhhHh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQ--PQSSMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~--~~~~~~~y~~  162 (255)
                      +|++|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..+..  +.++...|++
T Consensus       103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~a  182 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTA  182 (283)
T ss_dssp             HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHH
T ss_pred             hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHH
Confidence            999999999999876557889999999999999999999999999999986  468999999999887  7788999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhH-----HHHHHhhccc--CCCCCHHHHHHHHHHhcC
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV-----RQTIEQNTLL--NRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~d~a~~~~~l~s  234 (255)
                      ||+|++.|+++++.|+.+ +|+||+|+||+++|++..........     ..+.....+.  +++++|+|+|+.+.||++
T Consensus       183 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s  262 (283)
T 3v8b_A          183 TKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVS  262 (283)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcC
Confidence            999999999999999988 99999999999999988655332221     1122233455  889999999999999999


Q ss_pred             CCCCCccccEEEeCCCcc
Q 025273          235 DDASYITGETLVVAGGMP  252 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~  252 (255)
                      +..+++||++|.+|||+.
T Consensus       263 ~~a~~itG~~i~vdGG~~  280 (283)
T 3v8b_A          263 ERARHVTGSPVWIDGGQG  280 (283)
T ss_dssp             GGGTTCCSCEEEESTTHH
T ss_pred             ccccCCcCCEEEECcCcc
Confidence            999999999999999975

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2.6e-51  Score=336.36  Aligned_cols=245  Identities=25%  Similarity=0.360  Sum_probs=220.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-cCC-eEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-RGI-EVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++.. .+. ++.+++||++++++++++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999999888888876 333 599999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|+  +.++||++||..+..+.+....|++|
T Consensus        84 ~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  162 (265)
T 3lf2_A           84 TLGCASILVNNAGQGR-VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAA  162 (265)
T ss_dssp             HHCSCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHH
Confidence            9999999999999865 57888999999999999999999999999999996  36799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-------C-hhHHHHHHhh--cccCCCCCHHHHHHHHHHh
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-------N-DGVRQTIEQN--TLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-------~-~~~~~~~~~~--~~~~~~~~~~d~a~~~~~l  232 (255)
                      |+|+++|+++++.|+.+ |||||+|+||+++|++......       . ..........  .|.+++++|+|+++.++||
T Consensus       163 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL  242 (265)
T 3lf2_A          163 RAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFL  242 (265)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHH
Confidence            99999999999999988 9999999999999998765432       1 1222222222  7889999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCccc
Q 025273          233 ASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++..+++||++|.+|||+..
T Consensus       243 ~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          243 ASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HSGGGTTCCSEEEEESSSCCC
T ss_pred             hCchhcCcCCCEEEECCCCcC
Confidence            999999999999999999875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=8.6e-52  Score=339.96  Aligned_cols=250  Identities=32%  Similarity=0.499  Sum_probs=225.8

Q ss_pred             ccccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Q 025273            2 EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         2 ~~~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      .+.+|+.++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++
T Consensus        18 gp~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   97 (270)
T 3ftp_A           18 GPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVE   97 (270)
T ss_dssp             -----CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHH
Confidence            34567777999999999999999999999999999999999999999998888887777889999999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChh
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAM  159 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~  159 (255)
                      ++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+  +.++||++||..+..+.++...
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  176 (270)
T 3ftp_A           98 STLKEFGALNVLVNNAGITQ-DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVN  176 (270)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHH
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchh
Confidence            99999999999999999876 46778899999999999999999999999999884  5789999999999999999999


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      |++||+|++.|+++++.|+.+ +|+||+|+||+++|++....  ............+.+++++|+|+++.+.||+++...
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~  254 (270)
T 3ftp_A          177 YAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAG  254 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcC
Confidence            999999999999999999988 99999999999999987654  334445566677899999999999999999999999


Q ss_pred             CccccEEEeCCCcccC
Q 025273          239 YITGETLVVAGGMPSR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      +++|++|.+|||+..+
T Consensus       255 ~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          255 YITGTTLHVNGGMFMS  270 (270)
T ss_dssp             TCCSCEEEESTTSSCC
T ss_pred             CccCcEEEECCCcccC
Confidence            9999999999998753

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-51  Score=335.20  Aligned_cols=245  Identities=34%  Similarity=0.485  Sum_probs=224.7

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +|+++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+ .++.++++|++++++++++++++.
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999999998888887765 689999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCcc-CCCCCChhhH
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGY-QPQSSMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~-~~~~~~~~y~  161 (255)
                      +++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|+  +.++||++||..+. .+.++...|+
T Consensus        84 ~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~  162 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFP-DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYG  162 (262)
T ss_dssp             HHHSCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHH
T ss_pred             HHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhH
Confidence            99999999999999876 57888999999999999999999999999999986  56899999999986 7888999999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +||+|++.|+++++.|+.+ |||+|+|+||+++|++....  .++.........+.+++++|+|+++.+.||+++..+++
T Consensus       163 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~i  240 (262)
T 3pk0_A          163 ATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYI  240 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            9999999999999999988 99999999999999987543  34555666777889999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 025273          241 TGETLVVAGGMPS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      +|++|.+|||...
T Consensus       241 tG~~i~vdGG~~~  253 (262)
T 3pk0_A          241 TGQAIAVDGGQVL  253 (262)
T ss_dssp             CSCEEEESTTTTC
T ss_pred             cCCEEEECCCeec
Confidence            9999999999865

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-51  Score=338.90  Aligned_cols=246  Identities=30%  Similarity=0.430  Sum_probs=225.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|++++++++++++++.+.+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999999999999888887778899999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCcc-CCCCCChhhHhhH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGY-QPQSSMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~-~~~~~~~~y~~sK  164 (255)
                      |++|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..++ .+.++...|++||
T Consensus        84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  163 (280)
T 3tox_A           84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASK  163 (280)
T ss_dssp             SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHH
Confidence            99999999999876567888999999999999999999999999999986  46799999999998 6788899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc--CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT--SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +|++.|+++++.|+.+ +|+||+|+||+++|++.....  ..+..........+.+++++|+|+|+.++||+++..++++
T Consensus       164 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~it  243 (280)
T 3tox_A          164 AGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVT  243 (280)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCCc
Confidence            9999999999999987 999999999999999876522  2344555666777889999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |++|.+|||...
T Consensus       244 G~~i~vdGG~~~  255 (280)
T 3tox_A          244 GAALLADGGASV  255 (280)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECCCccc
Confidence            999999999875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=3.5e-51  Score=339.22  Aligned_cols=251  Identities=27%  Similarity=0.389  Sum_probs=217.8

Q ss_pred             cccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC----------------chhHHHHHHHHHhcCCeEEEE
Q 025273            3 KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK----------------QKNVDEAVVKLKARGIEVIGV   66 (255)
Q Consensus         3 ~~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~----------------~~~~~~~~~~~~~~~~~~~~~   66 (255)
                      +.+|+.+++||++|||||++|||++++++|+++|++|++++|+                .+.++...+++...+.++.++
T Consensus         2 p~~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (286)
T 3uve_A            2 PGSMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTA   81 (286)
T ss_dssp             ----CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEE
T ss_pred             CCCCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEE
Confidence            3456777999999999999999999999999999999999987                566777777777778899999


Q ss_pred             EecCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEE
Q 025273           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVV  143 (255)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv  143 (255)
                      ++|++++++++++++++.+.+|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|+|++   +++||
T Consensus        82 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv  161 (286)
T 3uve_A           82 EVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSII  161 (286)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             EcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEE
Confidence            999999999999999999999999999999998765456888999999999999999999999999999852   67999


Q ss_pred             EEcccCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc-----------CChh-HHH--
Q 025273          144 LISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT-----------SNDG-VRQ--  208 (255)
Q Consensus       144 ~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~-----------~~~~-~~~--  208 (255)
                      ++||..+..+.+....|++||+|+++|+++++.|+.+ +||||+|+||+++|++.....           .... ...  
T Consensus       162 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T 3uve_A          162 LTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPIC  241 (286)
T ss_dssp             EECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHH
T ss_pred             EECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHH
Confidence            9999999999999999999999999999999999988 999999999999999875311           0111 111  


Q ss_pred             HHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          209 TIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       209 ~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ......| +++++|+|+++.++||+++..+++||++|.+|||+..+
T Consensus       242 ~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  286 (286)
T 3uve_A          242 QMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK  286 (286)
T ss_dssp             HTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence            1223344 78899999999999999999999999999999998754

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=5.8e-51  Score=335.19  Aligned_cols=245  Identities=27%  Similarity=0.460  Sum_probs=220.9

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +.+++||++|||||++|||++++++|+++|++|++++++ .+.++.+.+++...+.++.++++|+++.++++++++++.+
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999998765 5567777888877788999999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC-ccCCCCCChhhHhhH
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA-GYQPQSSMAMYGVTK  164 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~-~~~~~~~~~~y~~sK  164 (255)
                      .+|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++++||++||.. +..+.++...|++||
T Consensus        93 ~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  171 (270)
T 3is3_A           93 HFGHLDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSK  171 (270)
T ss_dssp             HHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHH
Confidence            9999999999999875 57888999999999999999999999999999999889999999988 567888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc----------CChhHHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT----------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      +|++.|+++++.|+.+ +||||+|+||+++|++.....          ..+..........+.+++++|+|+++.+.||+
T Consensus       172 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~  251 (270)
T 3is3_A          172 GAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLV  251 (270)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            9999999999999988 999999999999999876321          12334455666789999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcc
Q 025273          234 SDDASYITGETLVVAGGMP  252 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++..+++||++|.+|||+.
T Consensus       252 s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          252 SKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             SGGGTTCCSCEEEESTTCC
T ss_pred             CCccCCccCcEEEeCCCCC
Confidence            9999999999999999974

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.8e-51  Score=335.21  Aligned_cols=246  Identities=26%  Similarity=0.436  Sum_probs=221.1

Q ss_pred             cccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Q 025273            3 KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         3 ~~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      +|....++++|++|||||++|||++++++|+++|++|++++++ .+.++.+.+++...+.++.++++|++++++++++++
T Consensus        22 ~mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~  101 (271)
T 3v2g_A           22 SMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIR  101 (271)
T ss_dssp             HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             hhccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            4444557899999999999999999999999999999998665 466777788887778899999999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-CCCChhh
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-QSSMAMY  160 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-~~~~~~y  160 (255)
                      ++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++.++||++||..+..+ .++...|
T Consensus       102 ~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y  180 (271)
T 3v2g_A          102 ETVEALGGLDILVNSAGIWH-SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLY  180 (271)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHH
T ss_pred             HHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHH
Confidence            99999999999999999876 578889999999999999999999999999999988899999999877654 7889999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +++|+|++.|+++++.|+.+ +||||+|+||+++|++.....   +.........+.+++++|+|+|+.+.||+++..++
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~  257 (271)
T 3v2g_A          181 SASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG---DHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKF  257 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC---SSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc---hhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCC
Confidence            99999999999999999988 999999999999999876432   23344556778899999999999999999999999


Q ss_pred             ccccEEEeCCCcc
Q 025273          240 ITGETLVVAGGMP  252 (255)
Q Consensus       240 ~~G~~i~~dgG~~  252 (255)
                      ++|++|.+|||+.
T Consensus       258 itG~~i~vdGG~~  270 (271)
T 3v2g_A          258 VTGASLTIDGGAN  270 (271)
T ss_dssp             CCSCEEEESTTTT
T ss_pred             ccCCEEEeCcCcc
Confidence            9999999999985

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2e-51  Score=335.95  Aligned_cols=246  Identities=31%  Similarity=0.496  Sum_probs=209.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++++|++|||||++|||++++++|+++|++|+++ +|+.+.++...+++...+.++.+++||+++.++++++++++.+.
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999998 66777777777888777788999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-CCCCCChhhHhhHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-QPQSSMAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK~  165 (255)
                      +|++|+||||||......++.+.+.++|++.+++|+.|+++++++++|+|++.++||++||..+. .+.++...|++||+
T Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKa  163 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKG  163 (259)
T ss_dssp             HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHH
T ss_pred             hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHH
Confidence            99999999999987556788999999999999999999999999999999888899999999988 77888999999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       166 a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      |++.|+++++.|+.++||||+|+||+++|++...... ++.........+.+++++|+|+++.+.||+++..++++|++|
T Consensus       164 a~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i  242 (259)
T 3edm_A          164 AVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK-PEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACY  242 (259)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEE
Confidence            9999999999999878999999999999998876543 334445556678899999999999999999999999999999


Q ss_pred             EeCCCcccC
Q 025273          246 VVAGGMPSR  254 (255)
Q Consensus       246 ~~dgG~~~~  254 (255)
                      .+|||....
T Consensus       243 ~vdGg~~~~  251 (259)
T 3edm_A          243 DINGGVLFS  251 (259)
T ss_dssp             EESBCSSBC
T ss_pred             EECCCcCCC
Confidence            999998753

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=7.2e-51  Score=332.73  Aligned_cols=245  Identities=29%  Similarity=0.459  Sum_probs=220.6

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ||.++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++   +.++.++++|++++++++++++++.+
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            566789999999999999999999999999999999999998887776665   45788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      .+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+   +++||++||..++.+.+....|++
T Consensus        79 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (259)
T 4e6p_A           79 HAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCA  157 (259)
T ss_dssp             HSSSCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHH
Confidence            9999999999999875 567888999999999999999999999999999853   679999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc---------CChhHHHHHHhhcccCCCCCHHHHHHHHHHh
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT---------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  232 (255)
                      ||+|++.|+++++.|+.+ +|++|+|+||+++|++.....         ...+.........+.+++++|+|+++.+.||
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L  237 (259)
T 4e6p_A          158 TKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFL  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999988 999999999999999875541         1334445566778999999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCcccC
Q 025273          233 ASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++..++++|++|++|||...+
T Consensus       238 ~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          238 ASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             TSGGGTTCCSCEEEESTTSSCC
T ss_pred             hCCccCCCCCCEEEECcChhcC
Confidence            9999999999999999998753

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=8.1e-51  Score=334.67  Aligned_cols=250  Identities=28%  Similarity=0.400  Sum_probs=223.1

Q ss_pred             ccccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Q 025273            2 EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         2 ~~~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      ++|+.+.+++||++|||||++|||++++++|+++|++|++++|+ +.++...+++...+.++.++++|+++.++++++.+
T Consensus        21 ~~m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   99 (273)
T 3uf0_A           21 QSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAE   99 (273)
T ss_dssp             ----CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             hhcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            35666677999999999999999999999999999999999976 55666777777778899999999999999999954


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChh
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAM  159 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~  159 (255)
                      . .++++++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+  +.++||++||..++.+.++...
T Consensus       100 ~-~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~  177 (273)
T 3uf0_A          100 E-LAATRRVDVLVNNAGIIA-RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAA  177 (273)
T ss_dssp             H-HHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHH
T ss_pred             H-HHhcCCCcEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChh
Confidence            4 466799999999999876 57888999999999999999999999999999985  5689999999999999999999


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      |++||+|++.|+++++.|+.+ ||+||+|+||+++|++.......+..........|.+++++|+|+++.+.||+++..+
T Consensus       178 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~  257 (273)
T 3uf0_A          178 YAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAAS  257 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            999999999999999999988 9999999999999999877666666666777788999999999999999999999999


Q ss_pred             CccccEEEeCCCcccC
Q 025273          239 YITGETLVVAGGMPSR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      +++|++|.+|||+..+
T Consensus       258 ~itG~~i~vdGG~~~s  273 (273)
T 3uf0_A          258 YVHGQVLAVDGGWLAS  273 (273)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             CCcCCEEEECcCccCC
Confidence            9999999999998753

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=5.2e-51  Score=339.31  Aligned_cols=246  Identities=27%  Similarity=0.397  Sum_probs=222.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc--hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .+++||++|||||++|||++++++|+++|++|++++|+.  ...+.+.+.+...+.++.++++|++++++++++++++.+
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999873  345566666766778999999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      .+|++|+||||||......++.+.+.++|++.+++|+.|+++++++++|+|+++++||++||..++.+.+....|++||+
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  204 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKA  204 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHH
Confidence            99999999999998765677889999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      |++.|+++++.|+.+ ||+||+|+||+++|++........+....+....+.+++++|+|+++.++||+++..++++|++
T Consensus       205 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~  284 (294)
T 3r3s_A          205 AILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEV  284 (294)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCE
Confidence            999999999999988 9999999999999998543333344444555667889999999999999999999999999999


Q ss_pred             EEeCCCccc
Q 025273          245 LVVAGGMPS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      |.+|||.+.
T Consensus       285 i~vdGG~~l  293 (294)
T 3r3s_A          285 HGVCGGEHL  293 (294)
T ss_dssp             EEESTTCCC
T ss_pred             EEECCCccC
Confidence            999999864

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.3e-50  Score=337.28  Aligned_cols=251  Identities=24%  Similarity=0.269  Sum_probs=223.3

Q ss_pred             cccccccCCCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 025273            3 KMKMAKRFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus         3 ~~~~~~~l~~k~vlItGa~~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      +|..++.+++|++|||||+|  |||++++++|+++|++|++++|+.+..+.+.+..... +++.+++||+++.+++++++
T Consensus        21 sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~   99 (296)
T 3k31_A           21 SMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMF   99 (296)
T ss_dssp             CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHH
T ss_pred             cccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHH
Confidence            35556678999999999997  9999999999999999999999977655554444333 35688999999999999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCC
Q 025273           81 NQTIEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSM  157 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~  157 (255)
                      +++.+.+|++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|+|+++++||++||..+..+.+.+
T Consensus       100 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~  179 (296)
T 3k31_A          100 KVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHY  179 (296)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT
T ss_pred             HHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCc
Confidence            9999999999999999998652   2677889999999999999999999999999999888999999999999999999


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ..|++||+|++.|+++++.|+.+ +||||+|+||+++|++..................+.+++++|+|+|+.++||+++.
T Consensus       180 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~  259 (296)
T 3k31_A          180 NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDL  259 (296)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence            99999999999999999999988 99999999999999987665444455566777789999999999999999999999


Q ss_pred             CCCccccEEEeCCCcccC
Q 025273          237 ASYITGETLVVAGGMPSR  254 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~~  254 (255)
                      .+++||++|.+|||+..+
T Consensus       260 a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          260 GRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             cCCccCCEEEECCCcccc
Confidence            999999999999998753

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=1.6e-50  Score=337.16  Aligned_cols=251  Identities=28%  Similarity=0.414  Sum_probs=218.4

Q ss_pred             cccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC------------chhHHHHHHHHHhcCCeEEEEEecC
Q 025273            3 KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK------------QKNVDEAVVKLKARGIEVIGVVCHV   70 (255)
Q Consensus         3 ~~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dv   70 (255)
                      +..|+.+++||++|||||++|||++++++|+++|++|++++|+            .+.++...+++...+.++.+++||+
T Consensus        19 p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   98 (299)
T 3t7c_A           19 PGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV   98 (299)
T ss_dssp             ---CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC
Confidence            3456677999999999999999999999999999999999987            6667777777877788999999999


Q ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcc
Q 025273           71 SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISS  147 (255)
Q Consensus        71 ~~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss  147 (255)
                      ++.++++++++++.+.+|++|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|+|.   +.++||++||
T Consensus        99 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS  178 (299)
T 3t7c_A           99 RDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS  178 (299)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence            9999999999999999999999999999876555588999999999999999999999999999974   3679999999


Q ss_pred             cCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---------ChhHH-----HHHHh
Q 025273          148 IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDGVR-----QTIEQ  212 (255)
Q Consensus       148 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---------~~~~~-----~~~~~  212 (255)
                      ..+..+.+....|++||+|++.|+++++.|+.+ ||+||+|+||+++|++......         .....     .....
T Consensus       179 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (299)
T 3t7c_A          179 IGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMH  258 (299)
T ss_dssp             GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHS
T ss_pred             hhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhc
Confidence            999999999999999999999999999999988 9999999999999998753210         00001     11223


Q ss_pred             hcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          213 NTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       213 ~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ..+ +++++|+|+|+.++||+++..+++||++|.+|||...+
T Consensus       259 ~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  299 (299)
T 3t7c_A          259 VLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK  299 (299)
T ss_dssp             SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence            334 78899999999999999999999999999999998754

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.4e-50  Score=336.14  Aligned_cols=246  Identities=31%  Similarity=0.466  Sum_probs=225.2

Q ss_pred             cccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHH
Q 025273            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         5 ~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      +++.++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+ .++.+++||++++++++++++++
T Consensus        34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  113 (293)
T 3rih_A           34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTV  113 (293)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999999998888887665 68999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCcc-CCCCCChhh
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGY-QPQSSMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~-~~~~~~~~y  160 (255)
                      .+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+  +.++||++||..+. .+.++...|
T Consensus       114 ~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y  192 (293)
T 3rih_A          114 VDAFGALDVVCANAGIFP-EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHY  192 (293)
T ss_dssp             HHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHH
T ss_pred             HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHH
Confidence            999999999999999876 57788999999999999999999999999999986  56899999999986 788899999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      ++||+|++.|+++++.|+.+ ||+||+|+||+++|++....  .+..........+.+++++|+|+++.+.||+++..++
T Consensus       193 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~  270 (293)
T 3rih_A          193 GASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--GEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGY  270 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc--cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999988 99999999999999987644  2445556667788999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|++|.+|||...
T Consensus       271 itG~~i~vdGG~~~  284 (293)
T 3rih_A          271 ITGQAIVVDGGQVL  284 (293)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CCCCEEEECCCccC
Confidence            99999999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=9.5e-51  Score=335.12  Aligned_cols=248  Identities=26%  Similarity=0.404  Sum_probs=215.4

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-------------CchhHHHHHHHHHhcCCeEEEEEecC
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-------------KQKNVDEAVVKLKARGIEVIGVVCHV   70 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~Dv   70 (255)
                      .+|+.++++|++|||||++|||++++++|+++|++|++++|             +.+.++...+++...+.++.++++|+
T Consensus         3 ~~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   82 (277)
T 3tsc_A            3 GSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT   82 (277)
T ss_dssp             ----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CccccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC
Confidence            45667799999999999999999999999999999999998             56677777777777788999999999


Q ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcc
Q 025273           71 SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISS  147 (255)
Q Consensus        71 ~~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss  147 (255)
                      ++.++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|++   .++||++||
T Consensus        83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS  161 (277)
T 3tsc_A           83 RDFDRLRKVVDDGVAALGRLDIIVANAGVAA-PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS  161 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            9999999999999999999999999999876 567889999999999999999999999999999863   579999999


Q ss_pred             cCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc---------CChhHHHHHHhhcccC
Q 025273          148 IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT---------SNDGVRQTIEQNTLLN  217 (255)
Q Consensus       148 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~  217 (255)
                      ..+..+.+....|++||+|++.|+++++.|+.+ +|+||+|+||+++|++.....         ..+..........+. 
T Consensus       162 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-  240 (277)
T 3tsc_A          162 AAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-  240 (277)
T ss_dssp             GGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-
T ss_pred             HhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-
Confidence            999999999999999999999999999999988 999999999999999865311         111111112222333 


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          218 RLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       218 ~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++.+|+|+|+.++||+++..++++|++|.+|||+..
T Consensus       241 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          241 WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            688999999999999999999999999999999864

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=8.1e-51  Score=330.14  Aligned_cols=241  Identities=29%  Similarity=0.440  Sum_probs=217.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+.++...+++   +.++.++++|++++++++++++++.+.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            4578999999999999999999999999999999999998887776666   5689999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++   .++||++||..+..+.+....|++||
T Consensus        79 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (247)
T 3rwb_A           79 GGIDILVNNASIVP-FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK  157 (247)
T ss_dssp             SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence            99999999999875 577889999999999999999999999999999862   58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +|++.|+++++.|+.+ +||+|+|+||+++|++....... ..........+.+++++|+|+++.+.||+++..++++|+
T Consensus       158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~  236 (247)
T 3rwb_A          158 GGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN-EAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQ  236 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG-GGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh-HHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCC
Confidence            9999999999999988 99999999999999987654322 222223333688999999999999999999999999999


Q ss_pred             EEEeCCCccc
Q 025273          244 TLVVAGGMPS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      +|.+|||+..
T Consensus       237 ~i~vdGG~~~  246 (247)
T 3rwb_A          237 TLNVDAGMVR  246 (247)
T ss_dssp             EEEESTTSSC
T ss_pred             EEEECCCccC
Confidence            9999999875

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-50  Score=332.53  Aligned_cols=240  Identities=33%  Similarity=0.497  Sum_probs=211.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++|||||++|||++++++|+++|++|+++ .|+.+.++.+.+++...+.++.++++|++++++++++++++.+.+|
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999999987 5566677778888877788999999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++++||++||..+..+.+....|++||+|++
T Consensus       105 ~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  183 (267)
T 3u5t_A          105 GVDVLVNNAGIMP-LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVE  183 (267)
T ss_dssp             CEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHH
Confidence            9999999999875 577889999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      .|+++++.|+.+ +||||+|+||+++|++...... +.....+....|.+++++|+|+|+.+.||+++...+++|++|.+
T Consensus       184 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~v  262 (267)
T 3u5t_A          184 AMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKS-DEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRA  262 (267)
T ss_dssp             HHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEE
T ss_pred             HHHHHHHHHhhhhCCEEEEEEECCCcCccccccCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEe
Confidence            999999999988 9999999999999998754322 33345566677899999999999999999999999999999999


Q ss_pred             CCCc
Q 025273          248 AGGM  251 (255)
Q Consensus       248 dgG~  251 (255)
                      |||+
T Consensus       263 dGG~  266 (267)
T 3u5t_A          263 NGGI  266 (267)
T ss_dssp             SSSC
T ss_pred             CCCc
Confidence            9996

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.6e-50  Score=330.32  Aligned_cols=246  Identities=26%  Similarity=0.407  Sum_probs=220.7

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++++|++++++++++++++.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999999999888887777899999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcc-c--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-Q--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+| +  ..++||++||..+..+.++...|++||
T Consensus        82 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (257)
T 3imf_A           82 GRIDILINNAAGNF-ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK  160 (257)
T ss_dssp             SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHH
Confidence            99999999999865 5788899999999999999999999999999998 3  368999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC-C-CeeEEEEeCCcccCCcccccc-CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          165 TALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAEYIT-SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       165 ~a~~~l~~~la~e~~-~-~v~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +|+++|+++++.|+. + |||+|+|+||+++|++..... ..+..........|.+++++|+|+++.+.||+++..++++
T Consensus       161 aa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it  240 (257)
T 3imf_A          161 AGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYIN  240 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence            999999999999996 6 999999999999998754322 1223334455667889999999999999999999999999


Q ss_pred             ccEEEeCCCcccC
Q 025273          242 GETLVVAGGMPSR  254 (255)
Q Consensus       242 G~~i~~dgG~~~~  254 (255)
                      |++|.+|||+..+
T Consensus       241 G~~i~vdGG~~~~  253 (257)
T 3imf_A          241 GTCMTMDGGQHLH  253 (257)
T ss_dssp             SCEEEESTTTTSC
T ss_pred             CCEEEECCCcccC
Confidence            9999999998764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-50  Score=330.56  Aligned_cols=244  Identities=29%  Similarity=0.442  Sum_probs=218.8

Q ss_pred             cccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         5 ~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +|+.++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++   +.++.++++|++++++++++++++.
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (271)
T 3tzq_B            4 SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTI   80 (271)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHH
Confidence            4566789999999999999999999999999999999999999888877766   5678889999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhH
Q 025273           85 EKFGKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      +.+|++|++|||||+... ...+.+.+.++|++.+++|+.++++++++++|+|+  +.++||++||..++.+.++...|+
T Consensus        81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (271)
T 3tzq_B           81 DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYA  160 (271)
T ss_dssp             HHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHH
Confidence            999999999999998733 56678899999999999999999999999999985  467999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +||+|++.|+++++.|+.+ ||++|+|+||+++|++..... .+.....+....+.+++++|+|+++.+.||+++..+++
T Consensus       161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~i  239 (271)
T 3tzq_B          161 CTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFI  239 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCc
Confidence            9999999999999999988 999999999999999876332 34455566777889999999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 025273          241 TGETLVVAGGMP  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      ||++|.+|||..
T Consensus       240 tG~~i~vdGG~~  251 (271)
T 3tzq_B          240 TGQVIAADSGLL  251 (271)
T ss_dssp             CSCEEEESTTTT
T ss_pred             CCCEEEECCCcc
Confidence            999999999943

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-50  Score=335.34  Aligned_cols=247  Identities=23%  Similarity=0.384  Sum_probs=200.6

Q ss_pred             cccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         5 ~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      +||.++++|++|||||++|||++++++|+++|++|++++| +.+.++...+++...+.++.++++|++++++++++++++
T Consensus        22 ~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           22 SMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             -CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            3556789999999999999999999999999999999995 777778888888877889999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCC-CCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-----CCeEEEEcccCccCCCCCC
Q 025273           84 IEKFGKIDVVVSNAAAN-PSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSM  157 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~iss~~~~~~~~~~  157 (255)
                      .+.+|++|+||||||+. ....++.+.+.++|++.+++|+.|+++++++++|+|++     .++||++||..+..+.+..
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  181 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER  181 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc
Confidence            99999999999999984 23567889999999999999999999999999999853     6799999999999999999


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHh-hcccCCCCCHHHHHHHHHHhcCC
Q 025273          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ-NTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      ..|++||+|++.|+++++.|+.+ +|++|+|+||+++|++.......  ....... ..|.+++++|+|+|+.+.||+++
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  259 (280)
T 4da9_A          182 LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK--YDGLIESGLVPMRRWGEPEDIGNIVAGLAGG  259 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CCBCHHHHHHHHHHHHTS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh--HHHHHhhcCCCcCCcCCHHHHHHHHHHHhCc
Confidence            99999999999999999999988 99999999999999987655322  1222222 56889999999999999999999


Q ss_pred             CCCCccccEEEeCCCccc
Q 025273          236 DASYITGETLVVAGGMPS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      ..++++|++|.+|||+..
T Consensus       260 ~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          260 QFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             TTGGGTTCEEEESTTCC-
T ss_pred             cccCCCCCEEEECCCccc
Confidence            999999999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.4e-50  Score=334.00  Aligned_cols=247  Identities=28%  Similarity=0.356  Sum_probs=223.2

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +..++||++|||||++|||++++++|+++|++|++++|+.+.++...+++... +.++.++++|++++++++++++++.+
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34589999999999999999999999999999999999998888887777543 67899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|+  +.++||++||..+..+.+....|++|
T Consensus       102 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  180 (277)
T 4fc7_A          102 EFGRIDILINCAAGNF-LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSA  180 (277)
T ss_dssp             HHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHH
T ss_pred             HcCCCCEEEECCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHH
Confidence            9999999999999765 57788899999999999999999999999999885  57899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccc-cCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI-TSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      |+|++.|+++++.|+.+ |||||+|+||+++|++.... ..............+.+++++|+|+++.++||+++..+++|
T Consensus       181 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~it  260 (277)
T 4fc7_A          181 KAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVT  260 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcC
Confidence            99999999999999988 99999999999999864332 23445555666778999999999999999999999999999


Q ss_pred             ccEEEeCCCcccC
Q 025273          242 GETLVVAGGMPSR  254 (255)
Q Consensus       242 G~~i~~dgG~~~~  254 (255)
                      |++|.+|||...+
T Consensus       261 G~~i~vdGG~~~~  273 (277)
T 4fc7_A          261 GAVLVADGGAWLT  273 (277)
T ss_dssp             SCEEEESTTHHHH
T ss_pred             CCEEEECCCcccC
Confidence            9999999998653

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=4.4e-50  Score=331.83  Aligned_cols=248  Identities=23%  Similarity=0.366  Sum_probs=216.4

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC------------chhHHHHHHHHHhcCCeEEEEEecCCCHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK------------QKNVDEAVVKLKARGIEVIGVVCHVSNGQ   74 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   74 (255)
                      |.++++|++|||||++|||++++++|+++|++|++++|+            .+.++...+++...+.++.++++|+++++
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA   84 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            357899999999999999999999999999999999997            45566666777777889999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccC
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQ  152 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~  152 (255)
                      +++++++++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..++.
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGIST-IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS  163 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCCC-CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC
Confidence            999999999999999999999999876 57788999999999999999999999999999985  568999999999999


Q ss_pred             CCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc------C-----C-hhHHHHH-HhhcccCC
Q 025273          153 PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT------S-----N-DGVRQTI-EQNTLLNR  218 (255)
Q Consensus       153 ~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~------~-----~-~~~~~~~-~~~~~~~~  218 (255)
                      +.++...|++||+|++.|+++++.|+.+ ||++|+|+||+++|++.....      .     . ....... ......++
T Consensus       164 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (281)
T 3s55_A          164 ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAP  243 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCS
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcC
Confidence            9999999999999999999999999988 999999999999999875311      0     0 0111111 11222378


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccCC
Q 025273          219 LGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSRL  255 (255)
Q Consensus       219 ~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                      +++|+|+++.++||+++..+++||++|++|||...++
T Consensus       244 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~~  280 (281)
T 3s55_A          244 FLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATARM  280 (281)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGGC
T ss_pred             CCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccCC
Confidence            8999999999999999999999999999999998765

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=4.3e-50  Score=330.87  Aligned_cols=242  Identities=29%  Similarity=0.481  Sum_probs=221.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.+++||++++++++++++++.+.+
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCC--CCChhhHh
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQ--SSMAMYGV  162 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~--~~~~~y~~  162 (255)
                      |++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++   +++||++||..+..+.  ++...|++
T Consensus       108 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~a  186 (276)
T 3r1i_A          108 GGIDIAVCNAGIVS-VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCT  186 (276)
T ss_dssp             SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHH
Confidence            99999999999876 567888999999999999999999999999999863   4899999999887654  36789999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ||+|++.|+++++.|+.+ +||||+|+||+++|++.....   +.........+.+++++|+|+++.+.||+++..++++
T Consensus       187 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~it  263 (276)
T 3r1i_A          187 SKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA---DYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMT  263 (276)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG---GGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence            999999999999999988 999999999999999986542   3444556677889999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |++|.+|||+..
T Consensus       264 G~~i~vdGG~~~  275 (276)
T 3r1i_A          264 GSDIVIDGGYTC  275 (276)
T ss_dssp             SCEEEESTTTTC
T ss_pred             CcEEEECcCccC
Confidence            999999999864

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=3.1e-50  Score=332.30  Aligned_cols=243  Identities=28%  Similarity=0.440  Sum_probs=220.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.+++||+++.++++++++++.+.+|+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999999999999988888877889999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhh--ccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP--HLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +|+||||||... ..++.+.+.++|++.+++|+.|+++++++++|  .|+  +.++||++||..+..+.++...|++||+
T Consensus       102 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKa  180 (279)
T 3sju_A          102 IGILVNSAGRNG-GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKH  180 (279)
T ss_dssp             CCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHH
Confidence            999999999876 57788899999999999999999999999999  464  4689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc---------CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT---------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      |++.|+++++.|+.+ +|+||+|+||+++|++.....         ..++....+....+.+++++|+|+|+.+.||+++
T Consensus       181 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  260 (279)
T 3sju_A          181 GVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTD  260 (279)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999988 999999999999999876532         1234455666778899999999999999999999


Q ss_pred             CCCCccccEEEeCCCccc
Q 025273          236 DASYITGETLVVAGGMPS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      ..++++|++|.+|||+..
T Consensus       261 ~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          261 AAASITAQALNVCGGLGN  278 (279)
T ss_dssp             GGGGCCSCEEEESTTCCC
T ss_pred             cccCcCCcEEEECCCccC
Confidence            999999999999999864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=3.8e-51  Score=334.82  Aligned_cols=248  Identities=21%  Similarity=0.336  Sum_probs=210.7

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC---chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK---QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      |+.++++++|++|||||++|||++++++|+++|++|++++|.   .+.++.+.+++...+.++.++++|+++++++++++
T Consensus         3 ~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A            3 LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             -CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHH
T ss_pred             CccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            344567899999999999999999999999999999998765   44566777777777889999999999999999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhh
Q 025273           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++.++||++||..+..+.+....|
T Consensus        83 ~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y  161 (262)
T 3ksu_A           83 DFAEKEFGKVDIAINTVGKVL-KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTY  161 (262)
T ss_dssp             HHHHHHHCSEEEEEECCCCCC-SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchh
Confidence            999999999999999999876 5788889999999999999999999999999999888899999999998888889999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      ++||+|++.|+++++.|+.+ +||||+|+||+++|++....... ..........+.+++.+|+|+|+.++||+++ .++
T Consensus       162 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~  239 (262)
T 3ksu_A          162 AGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETK-ESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GWW  239 (262)
T ss_dssp             ----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------CCCCSCCGGGTHHHHHHHHTT-TTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCch-HHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CCC
Confidence            99999999999999999988 99999999999999987654322 2334455566888999999999999999998 889


Q ss_pred             ccccEEEeCCCcccC
Q 025273          240 ITGETLVVAGGMPSR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      +||++|.+|||+...
T Consensus       240 itG~~i~vdGg~~~~  254 (262)
T 3ksu_A          240 INGQTIFANGGYTTR  254 (262)
T ss_dssp             CCSCEEEESTTCCCC
T ss_pred             ccCCEEEECCCccCC
Confidence            999999999998753

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=2.5e-50  Score=330.52  Aligned_cols=241  Identities=28%  Similarity=0.482  Sum_probs=209.7

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .|.+++||++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++++|++++++++++++++.+
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            446789999999999999999999999999999999999988877765554   56899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+  +.++||++||..+..+.++...|++|
T Consensus        98 ~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  176 (266)
T 3grp_A           98 EMEGIDILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAA  176 (266)
T ss_dssp             HHTSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHH
Confidence            9999999999999876 46778899999999999999999999999999985  56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|++.|+++++.|+.+ +||||+|+||+++|++....  .+..........|.+++++|+|+++.++||+++..++++|
T Consensus       177 Kaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG  254 (266)
T 3grp_A          177 KAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTG  254 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999988 99999999999999987654  3444556667789999999999999999999999999999


Q ss_pred             cEEEeCCCcc
Q 025273          243 ETLVVAGGMP  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      ++|.+|||+.
T Consensus       255 ~~i~vdGG~~  264 (266)
T 3grp_A          255 QTLHINGGMA  264 (266)
T ss_dssp             CEEEESTTC-
T ss_pred             CEEEECCCee
Confidence            9999999985

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-50  Score=334.21  Aligned_cols=245  Identities=29%  Similarity=0.388  Sum_probs=220.5

Q ss_pred             cccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         5 ~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +++.+++||++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.
T Consensus        26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (275)
T 4imr_A           26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAE  105 (275)
T ss_dssp             HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999999999888888888899999999999999999999998


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHh
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      +. +++|+||||||... ..++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..+..+.+....|++
T Consensus       106 ~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  183 (275)
T 4imr_A          106 AI-APVDILVINASAQI-NATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAA  183 (275)
T ss_dssp             HH-SCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             Hh-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHH
Confidence            77 89999999999876 56788899999999999999999999999999985  5689999999999998888899999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-ChhHHHHHHhhc-ccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-NDGVRQTIEQNT-LLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      ||+|++.|+++++.|+.+ +|+||+|+||+++|++...... .+.......... +.+++++|+|+|+.++||+++..++
T Consensus       184 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~  263 (275)
T 4imr_A          184 TKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSF  263 (275)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCC
Confidence            999999999999999988 9999999999999998765432 223333333333 8899999999999999999999999


Q ss_pred             ccccEEEeCCCc
Q 025273          240 ITGETLVVAGGM  251 (255)
Q Consensus       240 ~~G~~i~~dgG~  251 (255)
                      +||++|.+|||+
T Consensus       264 itG~~i~vdGG~  275 (275)
T 4imr_A          264 MTGETIFLTGGY  275 (275)
T ss_dssp             CCSCEEEESSCC
T ss_pred             CCCCEEEeCCCC
Confidence            999999999995

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.4e-50  Score=333.84  Aligned_cols=244  Identities=32%  Similarity=0.484  Sum_probs=215.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+.++...+++   +.++.++++|++++++++++++++.+.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            3589999999999999999999999999999999999998887777666   5688899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+  +.++||++||..+..+.++...|++||+
T Consensus       102 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  180 (277)
T 3gvc_A          102 GGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKA  180 (277)
T ss_dssp             SSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHH
Confidence            99999999999875 56788899999999999999999999999999985  5689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC-h-hHHHHHHh---hcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-D-GVRQTIEQ---NTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~-~-~~~~~~~~---~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      |++.|+++++.|+.+ ||++|+|+||+++|++....... . ........   ..+.+++++|+|+++.+.||+++..++
T Consensus       181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~  260 (277)
T 3gvc_A          181 GIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASM  260 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCC
Confidence            999999999999988 99999999999999987654321 1 11111111   446788999999999999999999999


Q ss_pred             ccccEEEeCCCcccCC
Q 025273          240 ITGETLVVAGGMPSRL  255 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~~  255 (255)
                      ++|++|.+|||+...+
T Consensus       261 itG~~i~vdGG~~~~~  276 (277)
T 3gvc_A          261 ITGTTQIADGGTIAAL  276 (277)
T ss_dssp             CCSCEEEESTTGGGSC
T ss_pred             ccCcEEEECCcchhcc
Confidence            9999999999998754

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=7e-50  Score=324.50  Aligned_cols=240  Identities=33%  Similarity=0.552  Sum_probs=219.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +.+|++|||||++|||++++++|+++|++|++++| +.+.++.+.+++...+.++.++++|+++.++++++++++.+.+|
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35899999999999999999999999999999887 45677778888877788999999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..+..+.++...|++||+|
T Consensus        82 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (246)
T 3osu_A           82 SLDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAG  160 (246)
T ss_dssp             CCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHH
Confidence            9999999999876 46788899999999999999999999999999985  57899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.|+++++.|+.+ +|++|+|+||+++|++....  .+..........+.+++++|+|+++.+.||+++..++++|++|
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i  238 (246)
T 3osu_A          161 VIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTI  238 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence            99999999999988 99999999999999987654  3445566677789999999999999999999999999999999


Q ss_pred             EeCCCcc
Q 025273          246 VVAGGMP  252 (255)
Q Consensus       246 ~~dgG~~  252 (255)
                      ++|||+.
T Consensus       239 ~vdgG~~  245 (246)
T 3osu_A          239 HVNGGMY  245 (246)
T ss_dssp             EESTTSC
T ss_pred             EeCCCcc
Confidence            9999985

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.9e-50  Score=330.72  Aligned_cols=240  Identities=31%  Similarity=0.488  Sum_probs=219.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++++|++|||||++|||++++++|+++|++|++++| +.+.++.+.+++...+.++.++++|+++.++++++++++.+.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999998 666677778888777889999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..+..+.+....|++||
T Consensus       104 ~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  182 (269)
T 4dmm_A          104 WGRLDVLVNNAGITR-DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAK  182 (269)
T ss_dssp             HSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHH
Confidence            999999999999876 56788899999999999999999999999999985  568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC-CCCCccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD-DASYITG  242 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~-~~~~~~G  242 (255)
                      +|++.|+++++.|+.+ ||++|+|+||+++|++....     .........+.+++++|+|+++.+.||+++ ..++++|
T Consensus       183 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-----~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG  257 (269)
T 4dmm_A          183 AGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL-----AAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITG  257 (269)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH-----HHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCS
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc-----cHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcC
Confidence            9999999999999988 99999999999999987543     224456667889999999999999999998 6789999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      ++|.+|||+..
T Consensus       258 ~~i~vdGG~~~  268 (269)
T 4dmm_A          258 QVINIDGGLVM  268 (269)
T ss_dssp             CEEEESTTSCC
T ss_pred             CEEEECCCeec
Confidence            99999999875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-50  Score=332.32  Aligned_cols=246  Identities=26%  Similarity=0.392  Sum_probs=214.8

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-------------CchhHHHHHHHHHhcCCeEEEEEecCCC
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-------------KQKNVDEAVVKLKARGIEVIGVVCHVSN   72 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   72 (255)
                      +|.+++||++|||||++|||++++++|+++|++|++++|             +.+.++.+.+++...+.++.++++|+++
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   88 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD   88 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            456799999999999999999999999999999999998             6677777888887778899999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccC
Q 025273           73 GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIA  149 (255)
Q Consensus        73 ~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~  149 (255)
                      +++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++   +++||++||..
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA  167 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchh
Confidence            99999999999999999999999999876 567888999999999999999999999999999852   68999999999


Q ss_pred             ccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc------CChhHHHH--HHhhcccCCCC
Q 025273          150 GYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT------SNDGVRQT--IEQNTLLNRLG  220 (255)
Q Consensus       150 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~------~~~~~~~~--~~~~~~~~~~~  220 (255)
                      +..+.+....|++||+|++.|+++++.|+.+ ||++|+|+||+++|++.....      ..+.....  .....+. +++
T Consensus       168 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~  246 (280)
T 3pgx_A          168 GLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GFM  246 (280)
T ss_dssp             GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SCB
T ss_pred             hccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-CCC
Confidence            9999999999999999999999999999988 999999999999999875311      01111100  1112233 688


Q ss_pred             CHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          221 TTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       221 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|+|+|+.++||+++..++++|++|.+|||...
T Consensus       247 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          247 TADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            999999999999999999999999999999764

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=7.6e-50  Score=329.52  Aligned_cols=243  Identities=29%  Similarity=0.468  Sum_probs=217.7

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++++|+++.++++++++++.+.+
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAKW   99 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999999988877766654   5689999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||+
T Consensus       100 g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  178 (277)
T 4dqx_A          100 GRVDVLVNNAGFGT-TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKG  178 (277)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHH
Confidence            99999999999875 567888999999999999999999999999999963  579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc-CC---hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT-SN---DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      |++.|+++++.|+.+ +|+||+|+||+++|++..... ..   ...........+.+++++|+|+|+.++||+++..+++
T Consensus       179 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~i  258 (277)
T 4dqx_A          179 AISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFA  258 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCCC
Confidence            999999999999988 999999999999999843321 11   2222336667789999999999999999999999999


Q ss_pred             cccEEEeCCCcccC
Q 025273          241 TGETLVVAGGMPSR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      +|++|.+|||....
T Consensus       259 tG~~i~vdGG~~~~  272 (277)
T 4dqx_A          259 TGSILTVDGGSSIG  272 (277)
T ss_dssp             CSCEEEESSSSSSC
T ss_pred             cCCEEEECCchhhh
Confidence            99999999998763

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=8.1e-50  Score=331.90  Aligned_cols=245  Identities=21%  Similarity=0.262  Sum_probs=215.0

Q ss_pred             ccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ..+++|++|||||+  +|||++++++|+++|++|++++|+....+.. +++....+++.+++||+++.++++++++++.+
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELGAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHH-HHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence            45899999999999  4599999999999999999999996543333 33333334788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHh
Q 025273           86 KFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      .+|++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|+|+++++||++||..+..+.+.+..|++
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~a  185 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGV  185 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHH
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHH
Confidence            99999999999998652   467788999999999999999999999999999988899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ||+|++.|+++++.|+.+ +|+||+|+||+++|++.......+..........+.+++++|+|+|+.++||+++..+++|
T Consensus       186 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it  265 (293)
T 3grk_A          186 AKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVT  265 (293)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCc
Confidence            999999999999999988 9999999999999998876655556666777788999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |++|.+|||+..
T Consensus       266 G~~i~vdGG~~~  277 (293)
T 3grk_A          266 GEVHHADSGYHV  277 (293)
T ss_dssp             SCEEEESTTGGG
T ss_pred             ceEEEECCCccc
Confidence            999999999875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=6.1e-50  Score=332.40  Aligned_cols=245  Identities=25%  Similarity=0.437  Sum_probs=221.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+. .+...+.+...+.++.++++|++++++++++++++.+.
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999764 34455555556789999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      +|++|+||||||......++.+.+.++|++.+++|+.|+++++++++|+|+++++||++||..++.+.+....|++||+|
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  202 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGA  202 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHH
Confidence            99999999999987656778889999999999999999999999999999888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.|+++++.|+.+ +|+||+|+||+++|++...... +.....+....+.+++++|+|+++.++||+++..++++|++|
T Consensus       203 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i  281 (291)
T 3ijr_A          203 IVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD-EKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMI  281 (291)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC-HHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC-HHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEE
Confidence            99999999999988 9999999999999998754432 333445556678899999999999999999999999999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||+..
T Consensus       282 ~vdGG~~~  289 (291)
T 3ijr_A          282 HVNGGVIV  289 (291)
T ss_dssp             EESSSCCC
T ss_pred             EECCCccc
Confidence            99999864

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.8e-50  Score=330.17  Aligned_cols=247  Identities=25%  Similarity=0.392  Sum_probs=211.1

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      ++.++++|++|||||++|||++++++|+++|++|++++| +.+.++...+++... +.++.++++|+++.++++++++++
T Consensus        19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999 566677777777655 678999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhH
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      .+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+  +.++||++||..+..+.+....|+
T Consensus        99 ~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  177 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYV  177 (281)
T ss_dssp             HHHTSSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHHCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHH
Confidence            999999999999999876 57788899999999999999999999999999986  458999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCCh---------h-HHHHHHhhcccCCCCCHHHHHHHHH
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---------G-VRQTIEQNTLLNRLGTTRDMAAAAA  230 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~d~a~~~~  230 (255)
                      +||+|++.|+++++.|+.+ +|++|+|+||+++|++........         + ....+....+.+++++|+|+++.++
T Consensus       178 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~  257 (281)
T 3v2h_A          178 AAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLAL  257 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence            9999999999999999988 999999999999999876543211         0 1122445568899999999999999


Q ss_pred             HhcCCCCCCccccEEEeCCCccc
Q 025273          231 FLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ||+++..++++|++|.+|||+..
T Consensus       258 ~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          258 YLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHcCCCcCCCCCcEEEECCCccC
Confidence            99999999999999999999865

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=2.5e-49  Score=324.80  Aligned_cols=249  Identities=25%  Similarity=0.316  Sum_probs=224.0

Q ss_pred             ccccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      |++++++|++|||||+  +|||++++++|+++|++|++++|+....+...+.....+. ++.+++||+++.+++++++++
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            3456889999999999  6699999999999999999999997665555555544443 799999999999999999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChh
Q 025273           83 TIEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM  159 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~  159 (255)
                      +.+.++++|++|||||+...   ..++.+.+.++|++.+++|+.+++.+++.++|+|+++++||++||..+..+.+....
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  160 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNV  160 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHH
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcch
Confidence            99999999999999998652   366788999999999999999999999999999998899999999999999999999


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      |++||+|++.|+++++.|+.+ +|++|+|+||+++|++.......+..........+.+++.+|+|+++.++|++++...
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~  240 (266)
T 3oig_A          161 MGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSR  240 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCchh
Confidence            999999999999999999988 9999999999999999877665556666777788999999999999999999999889


Q ss_pred             CccccEEEeCCCcccC
Q 025273          239 YITGETLVVAGGMPSR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      +++|+.|.+|||+..+
T Consensus       241 ~~tG~~i~vdGG~~~~  256 (266)
T 3oig_A          241 GITGENLHVDSGFHIT  256 (266)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             cCcCCEEEECCCeEEe
Confidence            9999999999999764

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=3.4e-49  Score=322.94  Aligned_cols=250  Identities=33%  Similarity=0.513  Sum_probs=221.7

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |+..+++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++++|++++++++++++++
T Consensus         1 m~~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (260)
T 2ae2_A            1 MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTV   80 (260)
T ss_dssp             -CCTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            34445678999999999999999999999999999999999998888888888776778999999999999999999999


Q ss_pred             HHHh-CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhh
Q 025273           84 IEKF-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        84 ~~~~-g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      .+.+ +++|++|||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|+  +.++||++||..+..+.++...|
T Consensus        81 ~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  159 (260)
T 2ae2_A           81 ANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVY  159 (260)
T ss_dssp             HHHTTTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHcCCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchH
Confidence            9999 89999999999865 56778899999999999999999999999999985  35799999999999999999999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHH---HHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQ---TIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ++||++++.|+++++.|+.+ +|++|+|+||+++|++.......+....   ......+.+++++|+|+|+.+.|++++.
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~  239 (260)
T 2ae2_A          160 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999988 9999999999999998765433332222   3445567889999999999999999988


Q ss_pred             CCCccccEEEeCCCcccC
Q 025273          237 ASYITGETLVVAGGMPSR  254 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~~  254 (255)
                      .++++|+++.+|||...+
T Consensus       240 ~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          240 ASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             ccCCCCCEEEECCCcccc
Confidence            889999999999998654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=2.7e-49  Score=323.55  Aligned_cols=249  Identities=46%  Similarity=0.781  Sum_probs=222.2

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ...+++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++++|+++.++++++++++.+.
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888888888777778999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||......++.+.+.++|++.+++|+.++++++++++|+|+  +.++||++||..++.+.++...|+++|
T Consensus        89 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  168 (260)
T 2zat_A           89 HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSK  168 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence            999999999999865446778899999999999999999999999999985  457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.|+++++.|+.+ +|++|+|+||+++|++.......+..........+.+++++|+|+++.+.|++++..++++|+
T Consensus       169 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~  248 (260)
T 2zat_A          169 TALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGE  248 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCC
Confidence            9999999999999988 999999999999999875433333333334455678889999999999999999988899999


Q ss_pred             EEEeCCCcccCC
Q 025273          244 TLVVAGGMPSRL  255 (255)
Q Consensus       244 ~i~~dgG~~~~~  255 (255)
                      ++++|||...++
T Consensus       249 ~~~vdgG~~~s~  260 (260)
T 2zat_A          249 TVVVGGGTASRL  260 (260)
T ss_dssp             EEEESTTCCCCC
T ss_pred             EEEECCCccccC
Confidence            999999998875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-49  Score=324.19  Aligned_cols=245  Identities=32%  Similarity=0.496  Sum_probs=215.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++++|++++++++++++++.+.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999988888888887767789999999999999999999999999


Q ss_pred             -CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           88 -GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 -g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                       +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|+  +.++||++||..++.+.++...|+++|
T Consensus        97 ~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  175 (273)
T 1ae1_A           97 DGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK  175 (273)
T ss_dssp             TSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHH
Confidence             89999999999865 56788899999999999999999999999999985  468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC----ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      ++++.|+++++.|+.+ +|++|+|+||+++|++......    ............+.+++++|+|+|+.+.|++++..++
T Consensus       176 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~  255 (273)
T 1ae1_A          176 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY  255 (273)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            9999999999999988 9999999999999998754432    2233344455678889999999999999999998899


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+++.+|||+..
T Consensus       256 ~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          256 ITGQIIWADGGFTA  269 (273)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             cCCCEEEECCCccc
Confidence            99999999999764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-49  Score=324.43  Aligned_cols=244  Identities=28%  Similarity=0.505  Sum_probs=218.3

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|++++++++++++++.+.
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            2 SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888888888766778999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||......++.+.+.++|++.+++|+.++++++++++|.|+  +.++||++||..+..+.+....|+++|
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  161 (262)
T 1zem_A           82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK  161 (262)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHH
Confidence            999999999999863356788899999999999999999999999999985  457999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccc------------cC-Chh-HHHHHHhhcccCCCCCHHHHHHHH
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI------------TS-NDG-VRQTIEQNTLLNRLGTTRDMAAAA  229 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~~~d~a~~~  229 (255)
                      ++++.|+++++.|+.+ +||+|+|+||+++|++....            .. .+. .........|.+++++|+|+|+.+
T Consensus       162 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  241 (262)
T 1zem_A          162 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV  241 (262)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999988 99999999999999987542            11 222 333344557889999999999999


Q ss_pred             HHhcCCCCCCccccEEEeCCC
Q 025273          230 AFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       230 ~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      .||+++..++++|+++.+|||
T Consensus       242 ~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          242 AFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHcCchhcCcCCcEEecCCC
Confidence            999999889999999999998

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.9e-49  Score=323.04  Aligned_cols=237  Identities=23%  Similarity=0.332  Sum_probs=211.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecC--CCHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHV--SNGQQRKNLINQTI   84 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv--~~~~~v~~~~~~~~   84 (255)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+.++...+++... +.++.++++|+  ++.++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999999988888887665 34788999999  99999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHh
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      +.+|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|+  +.++||++||..+..+.+....|++
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  167 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAA  167 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHH
Confidence            99999999999999865567888999999999999999999999999999995  4679999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      ||+|++.|+++++.|+.+.||||+|+||+++|++........          +..++.+|+|+++.+.||+++..++++|
T Consensus       168 sK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~~~~----------~~~~~~~p~dva~~~~~L~s~~~~~itG  237 (252)
T 3f1l_A          168 SKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTE----------DPQKLKTPADIMPLYLWLMGDDSRRKTG  237 (252)
T ss_dssp             HHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHCTTC----------CGGGSBCTGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhCCcc----------chhccCCHHHHHHHHHHHcCccccCCCC
Confidence            999999999999999987899999999999998865432221          2234679999999999999999999999


Q ss_pred             cEEEeCCCcccC
Q 025273          243 ETLVVAGGMPSR  254 (255)
Q Consensus       243 ~~i~~dgG~~~~  254 (255)
                      ++|.+|||....
T Consensus       238 ~~i~vdgG~~~~  249 (252)
T 3f1l_A          238 MTFDAQPGRKPG  249 (252)
T ss_dssp             CEEESSCC----
T ss_pred             CEEEeCCCcCCC
Confidence            999999998764

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=5.6e-49  Score=319.28  Aligned_cols=242  Identities=30%  Similarity=0.482  Sum_probs=223.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            36799999999999999999999999999999999999999998888888888999999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|+  +.++||++||..+..+.++...|++||+|
T Consensus        82 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (247)
T 3lyl_A           82 AIDILVNNAGITR-DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAG  160 (247)
T ss_dssp             CCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHH
Confidence            9999999999876 57788899999999999999999999999999885  56799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.|+++++.|+.+ +|++|+|+||+++|++....  .+..........+.+++.+|+|+++.+.|++++...+++|++|
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i  238 (247)
T 3lyl_A          161 VIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTL  238 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS--CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEE
Confidence            99999999999987 99999999999999988655  3344455667778899999999999999999999999999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      ++|||+..
T Consensus       239 ~vdgG~~~  246 (247)
T 3lyl_A          239 HVNGGMYM  246 (247)
T ss_dssp             EESTTSSC
T ss_pred             EECCCEec
Confidence            99999875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=7.7e-49  Score=321.36  Aligned_cols=247  Identities=30%  Similarity=0.510  Sum_probs=218.8

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++... +.++.++++|+++.++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888877777655 678999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|+  +.++||++||..++.+.++...|++||
T Consensus        83 ~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  161 (263)
T 3ai3_A           83 FGGADILVNNAGTGS-NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTK  161 (263)
T ss_dssp             HSSCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHH
Confidence            999999999999875 56778899999999999999999999999999985  458999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---------ChhHHHHHHhh-cccCCCCCHHHHHHHHHHhc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDGVRQTIEQN-TLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~d~a~~~~~l~  233 (255)
                      ++++.|+++++.|+.+ +|++|+|+||+++|++......         .+......... .+.+++++|+|+|+.+++++
T Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~  241 (263)
T 3ai3_A          162 AALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLC  241 (263)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHc
Confidence            9999999999999987 9999999999999998654311         12222233333 67889999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccCC
Q 025273          234 SDDASYITGETLVVAGGMPSRL  255 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                      ++..++++|+.+.+|||...++
T Consensus       242 s~~~~~~~G~~~~vdgG~~~s~  263 (263)
T 3ai3_A          242 SERATYSVGSAYFVDGGMLKTL  263 (263)
T ss_dssp             STTCTTCCSCEEEESTTCCCCC
T ss_pred             CccccCCCCcEEEECCCccccC
Confidence            9888899999999999987764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=2.1e-49  Score=325.45  Aligned_cols=245  Identities=29%  Similarity=0.433  Sum_probs=213.7

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |++++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...  +.++.++++|++++++++++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--
Confidence            445688999999999999999999999999999999999999988888888765  4678899999999999877654  


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhH
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                        +++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..++.+.+....|+
T Consensus        82 --~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  158 (267)
T 3t4x_A           82 --KYPKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYS  158 (267)
T ss_dssp             --HCCCCSEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHH
T ss_pred             --hcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHH
Confidence              5789999999999876 56788899999999999999999999999999985  457999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---------ChhHHH-HHH---hhcccCCCCCHHHHHH
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDGVRQ-TIE---QNTLLNRLGTTRDMAA  227 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---------~~~~~~-~~~---~~~~~~~~~~~~d~a~  227 (255)
                      +||+|++.|+++++.|+.+ +||||+|+||+++|++......         .++... ...   ...+.+++++|+|+|+
T Consensus       159 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~  238 (267)
T 3t4x_A          159 ATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAH  238 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHH
Confidence            9999999999999999988 9999999999999997654311         011111 111   2246789999999999


Q ss_pred             HHHHhcCCCCCCccccEEEeCCCcccCC
Q 025273          228 AAAFLASDDASYITGETLVVAGGMPSRL  255 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                      .+.||+++..+++||++|.+|||+..++
T Consensus       239 ~v~fL~s~~~~~itG~~i~vdGG~~~si  266 (267)
T 3t4x_A          239 LVTFLSSPLSSAINGSALRIDGGLVRSV  266 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCSCSC
T ss_pred             HHHHHcCccccCccCCeEEECCCccccc
Confidence            9999999999999999999999998764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-48  Score=320.52  Aligned_cols=248  Identities=33%  Similarity=0.511  Sum_probs=218.6

Q ss_pred             cccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHH-HhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         5 ~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      ....++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++ ...+.++.++++|+++.++++++++++
T Consensus        14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   93 (267)
T 1vl8_A           14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV   93 (267)
T ss_dssp             ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            3445688999999999999999999999999999999999998888777777 444678899999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccC-ccCCCCCChhh
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIA-GYQPQSSMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~-~~~~~~~~~~y  160 (255)
                      .+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||.. +..+.++...|
T Consensus        94 ~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y  172 (267)
T 1vl8_A           94 KEKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAY  172 (267)
T ss_dssp             HHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHH
T ss_pred             HHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhH
Confidence            999999999999999875 46788899999999999999999999999999986  357999999998 88888889999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +++|++++.|+++++.|+.+ +|++|+|+||+++|++.......+..........+.+++++|+|+|+.++|++++..++
T Consensus       173 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~  252 (267)
T 1vl8_A          173 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKY  252 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            99999999999999999988 99999999999999987654323333334445567888999999999999999998889


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+.+.+|||+..
T Consensus       253 itG~~i~vdGG~~~  266 (267)
T 1vl8_A          253 VTGQIIFVDGGWTA  266 (267)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCCeEEECCCCCC
Confidence            99999999999864

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.3e-48  Score=320.60  Aligned_cols=245  Identities=30%  Similarity=0.443  Sum_probs=212.6

Q ss_pred             ccccCCCCEEEEEcCC-CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      .+..+++|++|||||+ +|||++++++|+++|++|++++|+.+.++...+++... +.++.++++|+++.++++++++++
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT   95 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence            3456899999999997 59999999999999999999999999998888888665 468999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhh
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      .+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|+|+   ++++||++||..+..+.++...|
T Consensus        96 ~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  174 (266)
T 3o38_A           96 VEKAGRLDVLVNNAGLGG-QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHY  174 (266)
T ss_dssp             HHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHH
T ss_pred             HHHhCCCcEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchH
Confidence            999999999999999876 57788899999999999999999999999999986   45789999999999999999999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +++|+|++.|+++++.|+.+ +|++|+|+||+++|++...... ...........+.+++.+|+|+++.++|++++...+
T Consensus       175 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~  253 (266)
T 3o38_A          175 AAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSY  253 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------CCTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccC
Confidence            99999999999999999988 9999999999999998765543 333444556678899999999999999999998899


Q ss_pred             ccccEEEeCCCcc
Q 025273          240 ITGETLVVAGGMP  252 (255)
Q Consensus       240 ~~G~~i~~dgG~~  252 (255)
                      ++|++|.+|||++
T Consensus       254 ~tG~~i~vdgG~~  266 (266)
T 3o38_A          254 MTGEVVSVSSQRA  266 (266)
T ss_dssp             CCSCEEEESSCCC
T ss_pred             ccCCEEEEcCCcC
Confidence            9999999999974

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.5e-49  Score=323.25  Aligned_cols=242  Identities=23%  Similarity=0.336  Sum_probs=196.1

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      |++++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++   +.++.++++|++++++++++++++.+
T Consensus         1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999998877766655   45788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCc---cCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--------CCeEEEEcccCccCCC
Q 025273           86 KFGKIDVVVSNAAANPSVDSI---LQTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGYQPQ  154 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~---~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~iv~iss~~~~~~~  154 (255)
                      .+|++|+||||||........   .+.+.++|++.+++|+.++++++++++|+|++        .++||++||..+..+.
T Consensus        78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ  157 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC
Confidence            999999999999987532222   36788999999999999999999999999864        4789999999999999


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhccc-CCCCCHHHHHHHHHHh
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDMAAAAAFL  232 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l  232 (255)
                      ++...|++||+|++.|+++++.|+.+ ||++|+|+||+++|++......  +.........+. +++++|+|+++.+.||
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~--~~~~~~~~~~p~~~r~~~~~dva~~v~~l  235 (257)
T 3tpc_A          158 IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ--DVQDALAASVPFPPRLGRAEEYAALVKHI  235 (257)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH--HHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999988 9999999999999998765432  233444555666 8899999999999999


Q ss_pred             cCCCCCCccccEEEeCCCcccC
Q 025273          233 ASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++  .+++|++|.+|||+...
T Consensus       236 ~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          236 CEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHC--TTCCSCEEEESTTCCC-
T ss_pred             ccc--CCcCCcEEEECCCccCC
Confidence            975  78999999999998753

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=9.8e-49  Score=320.34  Aligned_cols=243  Identities=29%  Similarity=0.463  Sum_probs=205.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++++|+++.++++++++++.+.+
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKF   81 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999999998888777655   5689999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC------CCeEEEEcccCccCCCCCChhhH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK------GSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      +++|++|||||+.....++.+.+.++|++.+++|+.+++++++.++|+|++      .++||++||..+..+.+....|+
T Consensus        82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  161 (261)
T 3n74_A           82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYN  161 (261)
T ss_dssp             SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHH
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHH
Confidence            999999999998765677888899999999999999999999999999863      56899999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC--ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      ++|+|++.|+++++.|+.+ +|++|+|+||+++|++......  .+.....+....+.+++.+|+|+++.+.||+++...
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  241 (261)
T 3n74_A          162 ATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQAS  241 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCccc
Confidence            9999999999999999988 9999999999999998876532  233445566677889999999999999999999999


Q ss_pred             CccccEEEeCCCccc
Q 025273          239 YITGETLVVAGGMPS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      +++|++|.+|||...
T Consensus       242 ~itG~~i~vdgG~~~  256 (261)
T 3n74_A          242 MITGVALDVDGGRSI  256 (261)
T ss_dssp             TCCSCEEEESTTTTC
T ss_pred             CcCCcEEEecCCccc
Confidence            999999999999875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=9.2e-49  Score=328.99  Aligned_cols=246  Identities=27%  Similarity=0.409  Sum_probs=214.0

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC------------chhHHHHHHHHHhcCCeEEEEEecCCCHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK------------QKNVDEAVVKLKARGIEVIGVVCHVSNGQ   74 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   74 (255)
                      |.+++||++|||||++|||++++++|+++|++|++++|+            .+.++...+++...+.++.++++|+++++
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA  120 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            356889999999999999999999999999999999886            55666677777777889999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCcc
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGY  151 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~  151 (255)
                      +++++++++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+   ++++||++||..+.
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGISN-QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            999999999999999999999999876 56788899999999999999999999999999985   25799999999999


Q ss_pred             CCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc-----------CCh-hHHHHH--Hhhccc
Q 025273          152 QPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT-----------SND-GVRQTI--EQNTLL  216 (255)
Q Consensus       152 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~-----------~~~-~~~~~~--~~~~~~  216 (255)
                      .+.+....|++||+|++.|+++++.|+.+ ||+||+|+||+++|++.....           ... ......  ....+ 
T Consensus       200 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  278 (317)
T 3oec_A          200 RGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-  278 (317)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-
Confidence            99999999999999999999999999988 999999999999999764210           011 111111  11123 


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          217 NRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       217 ~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++++|+|+++++.||+++..+++||++|.+|||+..+
T Consensus       279 ~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          279 IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            67889999999999999999999999999999998765

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=8.9e-49  Score=323.90  Aligned_cols=243  Identities=30%  Similarity=0.452  Sum_probs=211.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++++|+++.++++++++++.+.+|
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            367999999999999999999999999999999999988777655443   56899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCcc----CCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           89 KIDVVVSNAAANPSVDSIL----QTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      ++|+||||||+......+.    +.+.++|++++++|+.++++++++++|+|+ .+++||++||..+..+.+....|++|
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  158 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTAT  158 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHHH
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHHH
Confidence            9999999999865333333    445678999999999999999999999985 56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC--------ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcC-
Q 025273          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS--------NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS-  234 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s-  234 (255)
                      |+|++.|+++++.|+.++||||+|+||+++|++......        ............|.+|+++|+|+++.++||++ 
T Consensus       159 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~  238 (281)
T 3zv4_A          159 KHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATR  238 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHST
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcc
Confidence            999999999999999878999999999999998653221        11244556677899999999999999999999 


Q ss_pred             CCCCCccccEEEeCCCcccC
Q 025273          235 DDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +...+++|++|.+|||+..+
T Consensus       239 ~~~~~itG~~i~vdGG~~~~  258 (281)
T 3zv4_A          239 GDSLPATGALLNYDGGMGVR  258 (281)
T ss_dssp             TTSTTCSSCEEEESSSGGGC
T ss_pred             cccccccCcEEEECCCCccc
Confidence            77888999999999998753

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-48  Score=321.12  Aligned_cols=247  Identities=27%  Similarity=0.399  Sum_probs=217.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...  +.++.++++|++++++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888877777654  66899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|+||||||......++.+.+.++|++.+++|+.+++.+++.++|.|+  +.++||++||..+..+.++...|+++
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  168 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA  168 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHH
Confidence            9999999999999865336778889999999999999999999999999986  46899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccc--cCChhHHH----HHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI--TSNDGVRQ----TIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      |++++.|+++++.|+.+ +|++|+|+||+++|++....  ...+....    ......+.+++++|+|+++.++|++++.
T Consensus       169 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~  248 (267)
T 1iy8_A          169 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD  248 (267)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999988 99999999999999986542  10111111    3444567889999999999999999988


Q ss_pred             CCCccccEEEeCCCcccC
Q 025273          237 ASYITGETLVVAGGMPSR  254 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~~  254 (255)
                      .++++|+.+.+|||+...
T Consensus       249 ~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          249 ASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             GTTCCSCEEEESTTTTTB
T ss_pred             ccCCCCCEEEECCCcccC
Confidence            889999999999998654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-49  Score=329.38  Aligned_cols=245  Identities=26%  Similarity=0.363  Sum_probs=211.4

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC------------chhHHHHHHHHHhcCCeEEEEEecCCCHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK------------QKNVDEAVVKLKARGIEVIGVVCHVSNGQ   74 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   74 (255)
                      |.+++||++|||||++|||++++++|+++|++|++++|+            .+.++....++...+.++.++++|+++.+
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA   84 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence            457899999999999999999999999999999999998            66667777777777889999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ  154 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~  154 (255)
                      +++++++++.+.+|++|+||||||+....   .+.+.++|++.+++|+.++++++++++|+|++.++||++||..+..+.
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  161 (287)
T 3pxx_A           85 AVSRELANAVAEFGKLDVVVANAGICPLG---AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAA  161 (287)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCC---TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCccc---CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccc
Confidence            99999999999999999999999986532   337889999999999999999999999999888999999999876544


Q ss_pred             -----------CCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---------ChhHHHH----
Q 025273          155 -----------SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDGVRQT----  209 (255)
Q Consensus       155 -----------~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---------~~~~~~~----  209 (255)
                                 ++...|+++|++++.|+++++.|+.+ +|+||+|+||+++|++......         .+.....    
T Consensus       162 ~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (287)
T 3pxx_A          162 AQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAF  241 (287)
T ss_dssp             HCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHG
T ss_pred             cccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhh
Confidence                       56778999999999999999999988 9999999999999998753210         0111110    


Q ss_pred             -HHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccCC
Q 025273          210 -IEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSRL  255 (255)
Q Consensus       210 -~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                       .....+ +++++|+|+++.++||+++..+++||++|.+|||+..++
T Consensus       242 ~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~~  287 (287)
T 3pxx_A          242 PAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLKF  287 (287)
T ss_dssp             GGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGGC
T ss_pred             hhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhcC
Confidence             112223 788999999999999999999999999999999998764

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=2.6e-48  Score=322.69  Aligned_cols=241  Identities=27%  Similarity=0.371  Sum_probs=213.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHHHH-hcCCeEEEEEecCCCHH-----------
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLK-ARGIEVIGVVCHVSNGQ-----------   74 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~-----------   74 (255)
                      .++++|++|||||++|||++++++|+++|++|++++ |+.+.++.+.+++. ..+.++.++++|+++.+           
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA   84 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence            567899999999999999999999999999999999 99988888888876 45678999999999999           


Q ss_pred             ------HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCC--------------HHHHHHHHHHHhHHHHHHHHHHhh
Q 025273           75 ------QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTK--------------ESVLDKLWDINVKSSILLLQDAAP  134 (255)
Q Consensus        75 ------~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~  134 (255)
                            +++++++++.+.+|++|+||||||+.. ..++.+.+              .++|++++++|+.+++.+++.++|
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  163 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  163 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                  999999999999999999999999865 45677788              899999999999999999999999


Q ss_pred             cccC--------CCeEEEEcccCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChh
Q 025273          135 HLQK--------GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG  205 (255)
Q Consensus       135 ~~~~--------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~  205 (255)
                      +|++        .++||++||..+..+.++...|++||++++.|+++++.|+.+ +|+||+|+||+++|++ . .  .+.
T Consensus       164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~--~~~  239 (291)
T 1e7w_A          164 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M--PPA  239 (291)
T ss_dssp             HHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S--CHH
T ss_pred             HHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C--CHH
Confidence            9863        479999999999999999999999999999999999999988 9999999999999998 4 2  233


Q ss_pred             HHHHHHhhcccC-CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          206 VRQTIEQNTLLN-RLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       206 ~~~~~~~~~~~~-~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ....+....+.+ ++++|+|+++.++||+++...+++|+++.+|||+..
T Consensus       240 ~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          240 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            334444556777 899999999999999999889999999999999764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=2.7e-48  Score=317.63  Aligned_cols=244  Identities=29%  Similarity=0.455  Sum_probs=210.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+.+. ++.+.+++... +.++.++++|++++++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            568999999999999999999999999999999999887 77777777654 6689999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|+  +.++||++||..+..+.++...|++||+
T Consensus        82 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  160 (260)
T 1x1t_A           82 GRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHH
Confidence            99999999999865 46778899999999999999999999999999985  4589999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC---------hhHHHHH-HhhcccCCCCCHHHHHHHHHHhcC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------DGVRQTI-EQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      +++.|+++++.|+.+ +|++|+|+||+++|++.......         ++..... ....+.+++++|+|+++.++|+++
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s  240 (260)
T 1x1t_A          161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999988 99999999999999987543210         1122222 344578899999999999999999


Q ss_pred             CCCCCccccEEEeCCCcccC
Q 025273          235 DDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +..++++|+++.+|||+..+
T Consensus       241 ~~~~~~tG~~~~vdgG~~~~  260 (260)
T 1x1t_A          241 DAAAQITGTTVSVDGGWTAR  260 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             hhhcCCCCCEEEECCCccCC
Confidence            88889999999999998654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=3.2e-48  Score=315.29  Aligned_cols=241  Identities=32%  Similarity=0.483  Sum_probs=203.1

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +.++++|++|||||++|||++++++|+++|++|++++|+. +.++.   ++...+.++.++++|++++++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            2 TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999998 65544   4444567899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|+  +.++||++||..++.+.++...|++|
T Consensus        79 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  157 (249)
T 2ew8_A           79 TFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYIST  157 (249)
T ss_dssp             HHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHH
Confidence            9999999999999865 46788899999999999999999999999999986  46899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccc-cccCC-hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAE-YITSN-DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      |++++.|+++++.|+.+ +|++|+|+||+++|++.. ..... ++......  .+.+++.+|+|+|+.+.|++++..+++
T Consensus       158 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~~~~~~  235 (249)
T 2ew8_A          158 KAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLASDDASFI  235 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT--SSSCSCCCTHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHcCcccCCC
Confidence            99999999999999988 999999999999999865 32211 11111111  567889999999999999999888899


Q ss_pred             cccEEEeCCCccc
Q 025273          241 TGETLVVAGGMPS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      +|+.+.+|||+..
T Consensus       236 tG~~~~vdGG~~~  248 (249)
T 2ew8_A          236 TGQTLAVDGGMVR  248 (249)
T ss_dssp             CSCEEEESSSCCC
T ss_pred             CCcEEEECCCccC
Confidence            9999999999764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=4.4e-48  Score=316.06  Aligned_cols=241  Identities=32%  Similarity=0.466  Sum_probs=215.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh--HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN--VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +|++|||||++|||++++++|+++|++|++++|+.+.  ++...+++...+.++.++++|++++++++++++++.+.+|+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            7899999999999999999999999999999999887  77777777666778999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CC-CeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KG-SSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~-~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      +|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|+  +. ++||++||..+..+.++...|+++|++
T Consensus        82 iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (258)
T 3a28_C           82 FDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFA  160 (258)
T ss_dssp             CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHH
Confidence            999999999865 46788899999999999999999999999999985  34 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc-------CC--hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT-------SN--DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ++.|+++++.|+.+ +|++|+|+||+++|++.....       ..  +.....+....+.+++++|+|+++.+.|++++.
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  240 (258)
T 3a28_C          161 VRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASEN  240 (258)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcc
Confidence            99999999999988 999999999999999865421       11  233334445567889999999999999999998


Q ss_pred             CCCccccEEEeCCCccc
Q 025273          237 ASYITGETLVVAGGMPS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      .++++|+.+.+|||+..
T Consensus       241 ~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          241 SNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             GTTCCSCEEEESSSSCC
T ss_pred             cCCCCCCEEEECCCEec
Confidence            88999999999999764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-48  Score=321.28  Aligned_cols=248  Identities=24%  Similarity=0.284  Sum_probs=215.6

Q ss_pred             ccccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      ....+++|++|||||+  +|||++++++|+++|++|++++|+....+. .+++....+++.+++||+++.++++++++++
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   86 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGSELVFPCDVADDAQIDALFASL   86 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH-HHHHHHHcCCcEEEECCCCCHHHHHHHHHHH
Confidence            3456889999999999  999999999999999999999999655444 3444344456889999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCC---CCccC-CCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChh
Q 025273           84 IEKFGKIDVVVSNAAANPSV---DSILQ-TKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM  159 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~---~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~  159 (255)
                      .+.++++|+||||||+....   .++.+ .+.++|++.+++|+.++++++++++|+|++.++||++||..+..+.+....
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  166 (271)
T 3ek2_A           87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNT  166 (271)
T ss_dssp             HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTH
T ss_pred             HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccc
Confidence            99999999999999986531   44455 899999999999999999999999999988889999999999999999999


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      |++||+|++.|+++++.|+.+ +|++|+|+||+++|++.......+..........+.+++.+|+|+++.++||+++...
T Consensus       167 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~  246 (271)
T 3ek2_A          167 MGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLAS  246 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccC
Confidence            999999999999999999987 9999999999999999876655556666777788999999999999999999999889


Q ss_pred             CccccEEEeCCCcccC
Q 025273          239 YITGETLVVAGGMPSR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      +++|++|.+|||+...
T Consensus       247 ~~tG~~i~vdgG~~~~  262 (271)
T 3ek2_A          247 GVTAEVMHVDSGFNAV  262 (271)
T ss_dssp             TCCSEEEEESTTGGGB
T ss_pred             CeeeeEEEECCCeeee
Confidence            9999999999998765

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1e-48  Score=321.61  Aligned_cols=238  Identities=32%  Similarity=0.475  Sum_probs=210.9

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ...++++|++|||||++|||++++++|+++|++|++++|+.+..          ......+++|+++.++++++++++.+
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKTTK   77 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999987543          12566789999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+  +.++||++||..++.+.+....|++|
T Consensus        78 ~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  156 (269)
T 3vtz_A           78 KYGRIDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTS  156 (269)
T ss_dssp             HHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHH
Confidence            9999999999999876 57788899999999999999999999999999985  56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC------C---hhHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS------N---DGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      |+|++.|+++++.|+.++|+||+|+||+++|++......      .   ......+....+.+++++|+|+++.++||++
T Consensus       157 Kaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  236 (269)
T 3vtz_A          157 KHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLAS  236 (269)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999889999999999999998654321      1   2344455667889999999999999999999


Q ss_pred             CCCCCccccEEEeCCCcccC
Q 025273          235 DDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +...+++|++|.+|||+..+
T Consensus       237 ~~~~~itG~~i~vdGG~~~~  256 (269)
T 3vtz_A          237 DRSSFITGACLTVDGGLLSK  256 (269)
T ss_dssp             GGGTTCCSCEEEESTTGGGB
T ss_pred             CccCCCcCcEEEECCCcccc
Confidence            99999999999999998764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=3.4e-48  Score=314.55  Aligned_cols=240  Identities=33%  Similarity=0.558  Sum_probs=215.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++|||||++|||++++++|+++|++|++++| +.+.++.+.+++...+.++.++++|++++++++++++++.+.+|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999 77777777777776677899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++++++.++|.|+  +.++||++||..+..+.++...|+++|++
T Consensus        82 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  160 (246)
T 2uvd_A           82 QVDILVNNAGVTK-DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAG  160 (246)
T ss_dssp             CCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHH
Confidence            9999999999865 46778899999999999999999999999999985  45899999999988888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.|+++++.|+.+ +|++|+|+||+++|++.....  +..........+.+++++|+|+|+.+.+++++..++++|+.+
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~  238 (246)
T 2uvd_A          161 VIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD--ENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTL  238 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEE
Confidence            99999999999988 999999999999999876432  223333445567888999999999999999988889999999


Q ss_pred             EeCCCcc
Q 025273          246 VVAGGMP  252 (255)
Q Consensus       246 ~~dgG~~  252 (255)
                      .+|||+.
T Consensus       239 ~vdgG~~  245 (246)
T 2uvd_A          239 NVDGGMV  245 (246)
T ss_dssp             EESTTSC
T ss_pred             EECcCcc
Confidence            9999975

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=2e-48  Score=321.37  Aligned_cols=242  Identities=27%  Similarity=0.388  Sum_probs=207.4

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC------------chhHHHHHHHHHhcCCeEEEEEecCCCHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK------------QKNVDEAVVKLKARGIEVIGVVCHVSNGQ   74 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   74 (255)
                      +.+++||++|||||++|||++++++|+++|++|++++|+            .+.++...+++...+.++.++++|+++++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            456899999999999999999999999999999999987            66667777777666889999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCcc
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGY  151 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~  151 (255)
                      +++++++++.+.+|++|+||||||+... .    .+.++|++++++|+.++++++++++|+|++   +++||++||..+.
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~-~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  162 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPM-S----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL  162 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCC-S----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCC-C----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc
Confidence            9999999999999999999999998642 2    258899999999999999999999999852   6799999999988


Q ss_pred             CCC----CCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHH---------HHhhcccC
Q 025273          152 QPQ----SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQT---------IEQNTLLN  217 (255)
Q Consensus       152 ~~~----~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~---------~~~~~~~~  217 (255)
                      .+.    ++...|++||+|++.|+++++.|+.+ +|+||+|+||+++|++.............         .....+ +
T Consensus       163 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  241 (278)
T 3sx2_A          163 AGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-V  241 (278)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-C
T ss_pred             CCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-c
Confidence            776    66778999999999999999999988 99999999999999987532211111111         112233 6


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          218 RLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       218 ~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ++.+|+|+|+.++||+++..++++|++|.+|||+..+
T Consensus       242 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~k  278 (278)
T 3sx2_A          242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLNK  278 (278)
T ss_dssp             SSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTC
T ss_pred             CcCCHHHHHHHHHHHhCcccccccCCEEeECCCcccC
Confidence            7889999999999999999999999999999998754

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=2.7e-48  Score=316.63  Aligned_cols=242  Identities=30%  Similarity=0.478  Sum_probs=223.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++|||||++|||++++++|+++|++|+++ .|+.+.++...+++...+.++.++++|+++.++++++++++.+.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            679999999999999999999999999999885 6777888888888888888999999999999999999999988774


Q ss_pred             ------CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHh
Q 025273           89 ------KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        89 ------~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                            ++|++|||||+.. ..++.+.+.++|++.+++|+.+++++++.++|+|++.++||++||..+..+.+....|++
T Consensus        85 ~~~~~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  163 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSM  163 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             ccccCCcccEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHH
Confidence                  4999999999865 567888999999999999999999999999999988889999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ||+|++.|+++++.|+.+ +|++|+|+||+++|++.......+..........+.+++.+|+|+++.+.||+++..++++
T Consensus       164 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~t  243 (255)
T 3icc_A          164 TKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT  243 (255)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             hHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCcc
Confidence            999999999999999988 9999999999999999988777666667777778889999999999999999999999999


Q ss_pred             ccEEEeCCCcc
Q 025273          242 GETLVVAGGMP  252 (255)
Q Consensus       242 G~~i~~dgG~~  252 (255)
                      |++|.+|||..
T Consensus       244 G~~i~vdgG~~  254 (255)
T 3icc_A          244 GQLIDVSGGSC  254 (255)
T ss_dssp             SCEEEESSSTT
T ss_pred             CCEEEecCCee
Confidence            99999999975

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=5e-48  Score=317.18  Aligned_cols=245  Identities=24%  Similarity=0.459  Sum_probs=219.2

Q ss_pred             cccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhH-HHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNV-DEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         7 ~~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      +.++++|++|||||+  +|||++++++|+++|++|++++|+.+.. +...+++... +.++.+++||+++.+++++++++
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH
Confidence            356899999999999  9999999999999999999999887665 5556666543 77999999999999999999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCC--CCCh
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQ--SSMA  158 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~--~~~~  158 (255)
                      +.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|+|+  +.++||++||..+..+.  ++..
T Consensus        95 ~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  173 (267)
T 3gdg_A           95 VVADFGQIDAFIANAGATA-DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQT  173 (267)
T ss_dssp             HHHHTSCCSEEEECCCCCC-CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCH
T ss_pred             HHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCC
Confidence            9999999999999999876 46678899999999999999999999999999986  56899999999887765  5788


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      .|++||+|++.|+++++.|+.+.|++|+|+||+++|++....  .+.....+....+.+++++|+|+++.++||+++...
T Consensus       174 ~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~~  251 (267)
T 3gdg_A          174 SYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLAKELKGAYVYFASDAST  251 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS--CHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTCT
T ss_pred             cchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC--CHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCccc
Confidence            999999999999999999998789999999999999988654  345556667778999999999999999999999999


Q ss_pred             CccccEEEeCCCcccC
Q 025273          239 YITGETLVVAGGMPSR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      +++|++|.+|||++.|
T Consensus       252 ~itG~~i~vdgG~~~r  267 (267)
T 3gdg_A          252 YTTGADLLIDGGYTTR  267 (267)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             cccCCEEEECCceecC
Confidence            9999999999999875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.6e-48  Score=318.76  Aligned_cols=245  Identities=28%  Similarity=0.410  Sum_probs=215.7

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |..++++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+ ++.++++|++++++++++++++
T Consensus        21 ~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~   99 (276)
T 2b4q_A           21 MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQAL   99 (276)
T ss_dssp             CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHH
Confidence            333456889999999999999999999999999999999999988888777775544 8889999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CC----CeEEEEcccCccCCCCCC
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KG----SSVVLISSIAGYQPQSSM  157 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~----~~iv~iss~~~~~~~~~~  157 (255)
                      .+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|+  +.    ++||++||..++.+.+..
T Consensus       100 ~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~  178 (276)
T 2b4q_A          100 GELSARLDILVNNAGTSW-GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQ  178 (276)
T ss_dssp             HHHCSCCSEEEECCCCCC-CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCS
T ss_pred             HHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCC
Confidence            999999999999999875 46778889999999999999999999999999985  33    799999999998888888


Q ss_pred             h-hhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHh--hcccCCCCCHHHHHHHHHHhc
Q 025273          158 A-MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ--NTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       158 ~-~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      . .|++||++++.|+++++.|+.+ +|++|+|+||+++|++.......  .......  ..+.+++++|+|+|+.++|++
T Consensus       179 ~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~  256 (276)
T 2b4q_A          179 AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND--PQALEADSASIPMGRWGRPEEMAALAISLA  256 (276)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC--HHHHHHHHHTSTTSSCCCHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh--HHHHHHhhcCCCCCCcCCHHHHHHHHHHHh
Confidence            8 9999999999999999999988 99999999999999987543221  2222333  567889999999999999999


Q ss_pred             CCCCCCccccEEEeCCCcc
Q 025273          234 SDDASYITGETLVVAGGMP  252 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++..++++|+++.+|||+.
T Consensus       257 s~~~~~~tG~~i~vdGG~~  275 (276)
T 2b4q_A          257 GTAGAYMTGNVIPIDGGFH  275 (276)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             CccccCCCCCEEEeCCCcc
Confidence            9888899999999999974

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=2.6e-48  Score=318.55  Aligned_cols=247  Identities=23%  Similarity=0.300  Sum_probs=212.9

Q ss_pred             cccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         7 ~~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      |..+++|++|||||+  +|||++++++|+++|++|++++|+. ..+...+++....+...++++|++++++++++++++.
T Consensus         4 m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            4 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             -CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHH
Confidence            345889999999999  9999999999999999999999987 4444445554432334788999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCC---CCCccC-CCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhh
Q 025273           85 EKFGKIDVVVSNAAANPS---VDSILQ-TKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      +.+|++|+||||||+...   ..++.+ .+.++|++.+++|+.++++++++++|+|+++++||++||..++.+.++...|
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  162 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVM  162 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHH
T ss_pred             HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHH
Confidence            999999999999998642   245667 8899999999999999999999999999767899999999999998999999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +++|++++.|+++++.|+.+ +|++|+|+||+++|++.......+..........+.+++.+|+|+++.+.|++++...+
T Consensus       163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~  242 (265)
T 1qsg_A          163 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG  242 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999988 99999999999999987654322333444455568889999999999999999988889


Q ss_pred             ccccEEEeCCCcccC
Q 025273          240 ITGETLVVAGGMPSR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      ++|+.+.+|||+..+
T Consensus       243 ~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          243 ISGEVVHVDGGFSIA  257 (265)
T ss_dssp             CCSCEEEESTTGGGB
T ss_pred             ccCCEEEECCCcCCC
Confidence            999999999998654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-48  Score=315.02  Aligned_cols=241  Identities=32%  Similarity=0.460  Sum_probs=215.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.+|++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999999888888888876677899999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      +||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++   .++||++||..+..+.+....|+++|++++
T Consensus        82 ~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  160 (256)
T 1geg_A           82 VIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  160 (256)
T ss_dssp             EEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence            9999999865 467788899999999999999999999999999863   579999999999999899999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc---------CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT---------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      .|+++++.|+.+ +|++|+|+||+++|++.....         ..+.....+....+.+++++|+|+|+.+.|++++..+
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~  240 (256)
T 1geg_A          161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD  240 (256)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999988 999999999999999865431         0222233344456788999999999999999998888


Q ss_pred             CccccEEEeCCCccc
Q 025273          239 YITGETLVVAGGMPS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      +++|+.+.+|||+..
T Consensus       241 ~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          241 YMTGQSLLIDGGMVF  255 (256)
T ss_dssp             TCCSCEEEESSSSSC
T ss_pred             CCCCCEEEeCCCccC
Confidence            999999999999764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=4.5e-48  Score=315.57  Aligned_cols=243  Identities=25%  Similarity=0.358  Sum_probs=219.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ..+++|++|||||++|||++++++|+++|++|++++ |+.+..+...+++...+.++.++++|+++.++++++++++.+.
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            447899999999999999999999999999999988 7777777777888777889999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|+|+  +.++||++||..+..+.++...|++||
T Consensus        89 ~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  167 (256)
T 3ezl_A           89 VGEIDVLVNNAGITR-DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAK  167 (256)
T ss_dssp             TCCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHH
Confidence            999999999999876 56788899999999999999999999999999986  457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +|++.|+++++.|+.+ +|++++|+||+++|++....  .++.........+.+++.+|+|+++.+.|++++...+++|+
T Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~  245 (256)
T 3ezl_A          168 AGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGA  245 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCc
Confidence            9999999999999988 99999999999999988654  34555666777889999999999999999999999999999


Q ss_pred             EEEeCCCccc
Q 025273          244 TLVVAGGMPS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      ++.+|||+..
T Consensus       246 ~i~vdgG~~~  255 (256)
T 3ezl_A          246 DFSLNGGLHM  255 (256)
T ss_dssp             EEEESTTSCC
T ss_pred             EEEECCCEeC
Confidence            9999999864

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=4.1e-48  Score=318.38  Aligned_cols=242  Identities=29%  Similarity=0.423  Sum_probs=212.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+ .+..+.+.+++...+.++.++++|+++.++++++++++.+.
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999995 55556667777777889999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++|||||+.. ..++.+.+.++|++.+++|+.+++++++.++|+|+  +.++||++||..+..+.++...|+++|
T Consensus       105 ~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  183 (271)
T 4iin_A          105 DGGLSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASK  183 (271)
T ss_dssp             HSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHH
Confidence            999999999999876 46778899999999999999999999999999986  458999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +|++.|+++++.|+.+ +|++|+|+||+++|++......  ..........+.+++.+|+|+++.+.||+++...+++|+
T Consensus       184 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~  261 (271)
T 4iin_A          184 GGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD--ELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGE  261 (271)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH--HHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCC
Confidence            9999999999999977 9999999999999998775532  233445566788899999999999999999998999999


Q ss_pred             EEEeCCCcc
Q 025273          244 TLVVAGGMP  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      ++.+|||+.
T Consensus       262 ~i~vdGG~~  270 (271)
T 4iin_A          262 TLKVNGGLY  270 (271)
T ss_dssp             EEEESTTSC
T ss_pred             EEEeCCCee
Confidence            999999986

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.2e-48  Score=316.10  Aligned_cols=246  Identities=26%  Similarity=0.310  Sum_probs=214.1

Q ss_pred             ccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++++|++|||||+  +|||++++++|+++|++|++++|+.+ .+...+++....+.+.++++|++++++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999  99999999999999999999999975 3334444444323478899999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHh
Q 025273           86 KFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      .+|++|+||||||....   ..++.+.+.++|++.+++|+.++++++++++|.|+++++||++||..+..+.++...|++
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  162 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAI  162 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHHH
Confidence            99999999999998642   256778899999999999999999999999999976789999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ||++++.|+++++.|+.+ +|++|+|+||+++|++.......+..........|.+++++|+|+++.+.|++++...+++
T Consensus       163 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~t  242 (261)
T 2wyu_A          163 AKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGIT  242 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCC
Confidence            999999999999999988 9999999999999998765433233444455567888999999999999999998888999


Q ss_pred             ccEEEeCCCcccC
Q 025273          242 GETLVVAGGMPSR  254 (255)
Q Consensus       242 G~~i~~dgG~~~~  254 (255)
                      |+.+.+|||+..+
T Consensus       243 G~~~~vdgG~~~~  255 (261)
T 2wyu_A          243 GEVVYVDAGYHIM  255 (261)
T ss_dssp             SCEEEESTTGGGB
T ss_pred             CCEEEECCCcccc
Confidence            9999999998653

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.5e-48  Score=314.75  Aligned_cols=238  Identities=28%  Similarity=0.293  Sum_probs=211.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ||++|||||++|||++++++|+++|  +.|++++|+.+.++.+.+++   +.++.++++|+++.++++++++++.+.+|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            6999999999999999999999985  78999999998888777665   458999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      +|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|+|+ .+++||++||..+..+.++...|++||+|++
T Consensus        79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  158 (254)
T 3kzv_A           79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALN  158 (254)
T ss_dssp             CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHHHHHHHHH
T ss_pred             ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHHHHHHHHH
Confidence            999999999876567888999999999999999999999999999986 3689999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCeeEEEEeCCcccCCccccccC-------ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC-CCCc
Q 025273          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS-------NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD-ASYI  240 (255)
Q Consensus       169 ~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~-~~~~  240 (255)
                      .|+++++.|+ ++||||+|+||+++|++......       .++....+....+.+++++|+|+++.+.||+++. ++++
T Consensus       159 ~~~~~la~e~-~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~i  237 (254)
T 3kzv_A          159 HFAMTLANEE-RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGV  237 (254)
T ss_dssp             HHHHHHHHHC-TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCCGGG
T ss_pred             HHHHHHHhhc-cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcccCCC
Confidence            9999999998 68999999999999999876532       2444556667778999999999999999999998 4899


Q ss_pred             cccEEEeCCCccc
Q 025273          241 TGETLVVAGGMPS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      +|+.|.+|||...
T Consensus       238 tG~~i~vdg~~~~  250 (254)
T 3kzv_A          238 NGQYLSYNDPALA  250 (254)
T ss_dssp             TTCEEETTCGGGG
T ss_pred             CccEEEecCcccc
Confidence            9999999999754

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=2.1e-47  Score=316.10  Aligned_cols=243  Identities=28%  Similarity=0.466  Sum_probs=214.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+. ++.+.+++...+.++.++++|+++.++++++++++.+.+
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF  105 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999999754 455666676667789999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCC-ChhhHhhHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS-MAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sK~a  166 (255)
                      +++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++++|++.++||++||..+..+.++ ...|++||++
T Consensus       106 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a  184 (283)
T 1g0o_A          106 GKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGA  184 (283)
T ss_dssp             SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHH
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHHH
Confidence            99999999999875 567888999999999999999999999999999977789999999998877664 8999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---------ChhHHHHHHh--hcccCCCCCHHHHHHHHHHhcC
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDGVRQTIEQ--NTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~--~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      ++.|+++++.|+.+ +|++|+|+||+++|++......         .+.....+..  ..+.+++++|+|+++.+.||++
T Consensus       185 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s  264 (283)
T 1g0o_A          185 IETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLAS  264 (283)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999988 9999999999999998654311         1223333434  5688899999999999999999


Q ss_pred             CCCCCccccEEEeCCCcc
Q 025273          235 DDASYITGETLVVAGGMP  252 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~  252 (255)
                      +..++++|++|.+|||+.
T Consensus       265 ~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          265 NDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             GGGTTCCSCEEEESTTCC
T ss_pred             ccccCcCCCEEEeCCCcc
Confidence            988999999999999975

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=1.1e-47  Score=317.32  Aligned_cols=245  Identities=23%  Similarity=0.274  Sum_probs=218.9

Q ss_pred             cccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         7 ~~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      |..+++|++|||||+  +|||++++++|+++|++|++++|+.  .+...+++.....++.+++||+++.++++++++++.
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHH
Confidence            356889999999988  7899999999999999999999997  334445555555578899999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCC---CCCccC-CCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChh
Q 025273           85 EKFGKIDVVVSNAAANPS---VDSILQ-TKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAM  159 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~  159 (255)
                      +.++++|+||||||+...   ..++.+ .+.++|++.+++|+.+++++++++++.|+ +.++||++||..+..+.+....
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  178 (280)
T 3nrc_A           99 KVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNT  178 (280)
T ss_dssp             HHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHH
T ss_pred             HHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchh
Confidence            999999999999998652   144455 88999999999999999999999999986 5789999999999999999999


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      |++||+|++.|+++++.|+.+ +|++|+|+||+++|++.......+..........+.+++.+|+|+|+.+.||+++...
T Consensus       179 Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~  258 (280)
T 3nrc_A          179 MGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMAT  258 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccC
Confidence            999999999999999999988 9999999999999999887766566667777788999999999999999999999889


Q ss_pred             CccccEEEeCCCccc
Q 025273          239 YITGETLVVAGGMPS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      +++|++|.+|||+..
T Consensus       259 ~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          259 GITGEVVHVDAGYHC  273 (280)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CcCCcEEEECCCccc
Confidence            999999999999875

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.9e-48  Score=315.42  Aligned_cols=243  Identities=33%  Similarity=0.479  Sum_probs=182.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|++++++++++++++.+.+
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999999999999988888899999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCC--CCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           88 GKIDVVVSNAAANP--SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      +++|++|||||+..  ...++.+.+.++|++.+++|+.+++++++.++|.|+  +.++||++||..++   .+...|++|
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~as  161 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLA  161 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CC
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHHH
Confidence            99999999999842  235567889999999999999999999999999985  56899999999876   456789999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|++.|+++++.|+.+ +|++++|+||+++|++...... +..........+.+++.+|+|+++.+.|++++...+++|
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG  240 (253)
T 3qiv_A          162 KVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP-KEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITG  240 (253)
T ss_dssp             HHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------CCHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc-HHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCCC
Confidence            99999999999999987 9999999999999998765433 233344555667888999999999999999998899999


Q ss_pred             cEEEeCCCcccC
Q 025273          243 ETLVVAGGMPSR  254 (255)
Q Consensus       243 ~~i~~dgG~~~~  254 (255)
                      ++|++|||...+
T Consensus       241 ~~~~vdgG~~~~  252 (253)
T 3qiv_A          241 QIFNVDGGQIIR  252 (253)
T ss_dssp             CEEEC-------
T ss_pred             CEEEECCCeecC
Confidence            999999998764

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.6e-47  Score=315.82  Aligned_cols=244  Identities=28%  Similarity=0.439  Sum_probs=217.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.+|
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999999888888888876677899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhc--cc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH--LQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.  |+  +.++||++||..+..+.+....|+++|
T Consensus        99 ~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  177 (277)
T 2rhc_B           99 PVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASK  177 (277)
T ss_dssp             SCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHH
Confidence            9999999999865 567788999999999999999999999999998  75  357999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---C------hhHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---N------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      ++++.|+++++.|+.+ +|++|+|+||+++|++......   .      +..........+.+++++|+|+|+.++|+++
T Consensus       178 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s  257 (277)
T 2rhc_B          178 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG  257 (277)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999988 9999999999999998654311   0      2222334455678899999999999999999


Q ss_pred             CCCCCccccEEEeCCCccc
Q 025273          235 DDASYITGETLVVAGGMPS  253 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~  253 (255)
                      +..++++|+++.+|||+..
T Consensus       258 ~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          258 PGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             GGGTTCCSCEEEESTTCCC
T ss_pred             chhcCCCCcEEEECCCccc
Confidence            8888999999999999753

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=7.9e-48  Score=316.36  Aligned_cols=243  Identities=26%  Similarity=0.409  Sum_probs=214.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++|||||++|||++++++|+++|++|++++ |+.+.++...+++...+.++.+++||+++.++++++++++.+.+|
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999998 555566666666666678899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|+  +.++||++||..+..+.++...|++||+|
T Consensus       103 ~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  181 (269)
T 3gk3_A          103 KVDVLINNAGITR-DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAG  181 (269)
T ss_dssp             CCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCcCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHH
Confidence            9999999999876 46788899999999999999999999999999885  56899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.|+++++.|+.+ +|++|+|+||+++|++....... ..........+.+++.+|+|+++.+.||+++...+++|++|
T Consensus       182 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i  260 (269)
T 3gk3_A          182 IHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD-VLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADL  260 (269)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEE
T ss_pred             HHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh-HHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEE
Confidence            99999999999988 99999999999999988655322 11113445668889999999999999999999999999999


Q ss_pred             EeCCCcccC
Q 025273          246 VVAGGMPSR  254 (255)
Q Consensus       246 ~~dgG~~~~  254 (255)
                      ++|||+..+
T Consensus       261 ~vdgG~~~s  269 (269)
T 3gk3_A          261 AINGGMHMS  269 (269)
T ss_dssp             EESTTSCCC
T ss_pred             EECCCEeCc
Confidence            999998753

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.1e-47  Score=313.80  Aligned_cols=235  Identities=21%  Similarity=0.273  Sum_probs=195.6

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+++....++.     .+.++++|++++++++++++++.+.
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-----GAVALYGDFSCETGIMAFIDLLKTQ   96 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-----TCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-----CCeEEECCCCCHHHHHHHHHHHHHh
Confidence            35688999999999999999999999999999999999987654333322     2678899999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||.... .. .+.+.++|++.+++|+.|+++++++++|+|++  .++||++||..+..+.++...|++||
T Consensus        97 ~g~iD~lv~nAg~~~~-~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  174 (260)
T 3gem_A           97 TSSLRAVVHNASEWLA-ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATK  174 (260)
T ss_dssp             CSCCSEEEECCCCCCC-CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHH
T ss_pred             cCCCCEEEECCCccCC-CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHH
Confidence            9999999999998753 22 56788999999999999999999999999974  47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +|++.|+++++.|+.++|+||+|+||+++|++..    ............+.+++++|+|+++.++||+  ...+++|++
T Consensus       175 aa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~----~~~~~~~~~~~~p~~r~~~~edva~~v~~L~--~~~~itG~~  248 (260)
T 3gem_A          175 AGLESLTLSFAARFAPLVKVNGIAPALLMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYLL--DSTYVTGTT  248 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECTTCC-------------------CCSCCCCCTHHHHHHHHHHH--HCSSCCSCE
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEeecccccCCCC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh--hCCCCCCCE
Confidence            9999999999999988999999999999998753    2233344555678899999999999999999  467899999


Q ss_pred             EEeCCCcccC
Q 025273          245 LVVAGGMPSR  254 (255)
Q Consensus       245 i~~dgG~~~~  254 (255)
                      |.+|||+..+
T Consensus       249 i~vdGG~~~~  258 (260)
T 3gem_A          249 LTVNGGRHVK  258 (260)
T ss_dssp             EEESTTTTTC
T ss_pred             EEECCCcccC
Confidence            9999998764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1e-47  Score=316.68  Aligned_cols=244  Identities=23%  Similarity=0.301  Sum_probs=213.7

Q ss_pred             cCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++++|++|||||+  +|||++++++|+++|++|++++|+.+ .+...+++....+.+.++++|+++.++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4679999999999  99999999999999999999999976 44444555443334788999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhh
Q 025273           87 FGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|.|+++++||++||..+..+.+....|++|
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  161 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLA  161 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHH
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHH
Confidence            9999999999998653   2567788999999999999999999999999999877899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |++++.|+++++.|+.+ +|++|+|+||+++|++.......+..........+.+++++|+|+++.++|++++...+++|
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG  241 (275)
T 2pd4_A          162 KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSG  241 (275)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCC
Confidence            99999999999999987 99999999999999987654332333444555678889999999999999999988889999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.+.+|||+..
T Consensus       242 ~~~~vdgg~~~  252 (275)
T 2pd4_A          242 EVHFVDAGYHV  252 (275)
T ss_dssp             CEEEESTTGGG
T ss_pred             CEEEECCCccc
Confidence            99999999753

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-47  Score=319.50  Aligned_cols=246  Identities=30%  Similarity=0.461  Sum_probs=216.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCC---eEEEEEecCCCHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.   ++.++++|+++.++++++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999988888888876655   89999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCC--ccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCC-CCChhh
Q 025273           85 EKFGKIDVVVSNAAANPSVDS--ILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQ-SSMAMY  160 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~-~~~~~y  160 (255)
                      +.+|++|+||||||... ..+  +.+.+.++|++.+++|+.++++++++++|.|+ .+++||++||..+..+. ++...|
T Consensus       102 ~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~~Y  180 (297)
T 1xhl_A          102 AKFGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYY  180 (297)
T ss_dssp             HHHSCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHH
T ss_pred             HhcCCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCCcchH
Confidence            99999999999999865 345  78899999999999999999999999999985 45899999999998887 889999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC-------hhHHHHHHhhcccCCCCCHHHHHHHHHHh
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-------DGVRQTIEQNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  232 (255)
                      +++|++++.|+++++.|+.+ ||++|+|+||+++|++.......       .+.........+.+++++|+|+|+.++|+
T Consensus       181 ~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l  260 (297)
T 1xhl_A          181 ACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFL  260 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999988 99999999999999987644211       11122223345778899999999999999


Q ss_pred             cCCC-CCCccccEEEeCCCcccC
Q 025273          233 ASDD-ASYITGETLVVAGGMPSR  254 (255)
Q Consensus       233 ~s~~-~~~~~G~~i~~dgG~~~~  254 (255)
                      +++. .++++|+.|.+|||+..+
T Consensus       261 ~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          261 ADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HCHHHHTTCCSCEEEESTTGGGC
T ss_pred             hCCcccCCccCcEEEECCCcccc
Confidence            9987 789999999999998653

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.2e-48  Score=320.52  Aligned_cols=236  Identities=28%  Similarity=0.418  Sum_probs=208.3

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .+.+++||++|||||++|||++++++|+++|++|++++|+.+.++.           ...+++|+++.++++++++++.+
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----------~~~~~~Dv~~~~~~~~~~~~~~~   90 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----------DLHLPGDLREAAYADGLPGAVAA   90 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----------SEECCCCTTSHHHHHHHHHHHHH
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----------hhccCcCCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999998765321           13458999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..++.+.++...|++|
T Consensus        91 ~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  169 (266)
T 3uxy_A           91 GLGRLDIVVNNAGVIS-RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLT  169 (266)
T ss_dssp             HHSCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHH
T ss_pred             hcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHH
Confidence            9999999999999876 47788899999999999999999999999999986  47899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-----ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-----NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      |+|++.|+++++.|+.+ ||++|+|+||+++|++......     .+..........+.+++++|+|+|+.++||+++..
T Consensus       170 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~  249 (266)
T 3uxy_A          170 KAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAA  249 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999988 9999999999999998754321     12233556667788999999999999999999999


Q ss_pred             CCccccEEEeCCCccc
Q 025273          238 SYITGETLVVAGGMPS  253 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~  253 (255)
                      ++++|++|.+|||...
T Consensus       250 ~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          250 RYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             TTCCSCEEEESTTCCC
T ss_pred             cCCcCCEEEECcCEeC
Confidence            9999999999999875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.5e-47  Score=313.19  Aligned_cols=242  Identities=25%  Similarity=0.404  Sum_probs=209.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...  +.++.++++|++++++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999998888877777543  337899999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +| +|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|+  +.++||++||..++.+.++...|+++|
T Consensus        84 ~g-id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  161 (260)
T 2z1n_A           84 GG-ADILVYSTGGPR-PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMR  161 (260)
T ss_dssp             TC-CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHT
T ss_pred             cC-CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHH
Confidence            98 999999999765 46778889999999999999999999999999985  458999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc--------CChhH-HHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT--------SNDGV-RQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      ++++.|+++++.|+.+ +|++|+|+||+++|++.....        ..... ........|.+++++|+|+++.+.|+++
T Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s  241 (260)
T 2z1n_A          162 LPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLAS  241 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhC
Confidence            9999999999999988 999999999999999865210        01111 2223344577889999999999999999


Q ss_pred             CCCCCccccEEEeCCCcc
Q 025273          235 DDASYITGETLVVAGGMP  252 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~  252 (255)
                      +..++++|+++.+|||+.
T Consensus       242 ~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          242 EKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             GGGTTCCSCEEEESTTTT
T ss_pred             ccccCCCCCEEEeCCCcc
Confidence            988899999999999975

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=9.7e-48  Score=315.85  Aligned_cols=245  Identities=20%  Similarity=0.249  Sum_probs=209.6

Q ss_pred             ccccCCCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         6 ~~~~l~~k~vlItGa--~~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      ||..+++|++|||||  ++|||++++++|+++|++|++++|+.++ ++.+.++   .+.++.++++|+++++++++++++
T Consensus         1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~   77 (269)
T 2h7i_A            1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGR   77 (269)
T ss_dssp             -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHH
T ss_pred             CccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---cCCCceEEEccCCCHHHHHHHHHH
Confidence            345688999999999  9999999999999999999999999765 2333322   245788899999999999999999


Q ss_pred             HHHHhC---CCCEEEEcCCCCCC----CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCC
Q 025273           83 TIEKFG---KIDVVVSNAAANPS----VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS  155 (255)
Q Consensus        83 ~~~~~g---~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~  155 (255)
                      +.+.+|   ++|+||||||....    ..++.+.+.++|++.+++|+.+++.++++++|+|++.++||++||..+ .+.+
T Consensus        78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~  156 (269)
T 2h7i_A           78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMP  156 (269)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCT
T ss_pred             HHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccC
Confidence            999999   99999999998642    357788899999999999999999999999999987789999999876 6677


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---Chh-------HHHHHHhhcccC-CCCCHH
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---NDG-------VRQTIEQNTLLN-RLGTTR  223 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---~~~-------~~~~~~~~~~~~-~~~~~~  223 (255)
                      .+..|++||++++.|+++++.|+.+ +||||+|+||+++|++......   .+.       .........|.+ ++++|+
T Consensus       157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~  236 (269)
T 2h7i_A          157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDAT  236 (269)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHH
Confidence            8899999999999999999999987 9999999999999998654321   111       122334556888 699999


Q ss_pred             HHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          224 DMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       224 d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      |+|+.+.||+++..+++||++|.+|||+...
T Consensus       237 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  267 (269)
T 2h7i_A          237 PVAKTVCALLSDWLPATTGDIIYADGGAHTQ  267 (269)
T ss_dssp             HHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHHHHhCchhccCcceEEEecCCeeee
Confidence            9999999999999999999999999998753

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.3e-47  Score=314.17  Aligned_cols=248  Identities=31%  Similarity=0.438  Sum_probs=213.7

Q ss_pred             ccccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Q 025273            2 EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         2 ~~~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      .+|+...++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++.   .++.++++|+++.++++++++
T Consensus         2 ~~m~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~   78 (263)
T 3ak4_A            2 SHMAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQ   78 (263)
T ss_dssp             ----CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHH
T ss_pred             CCcccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHH
Confidence            45666667899999999999999999999999999999999999877666554432   367889999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--C-CCeEEEEcccCccCCCCCCh
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--K-GSSVVLISSIAGYQPQSSMA  158 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~-~~~iv~iss~~~~~~~~~~~  158 (255)
                      ++.+.+|++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|+  . .++||++||..+..+.++..
T Consensus        79 ~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  157 (263)
T 3ak4_A           79 KAIDALGGFDLLCANAGVST-MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLA  157 (263)
T ss_dssp             HHHHHHTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCH
T ss_pred             HHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCch
Confidence            99999999999999999865 46778899999999999999999999999999985  3 58999999999998888999


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC----C-----hhHHHHHHhhcccCCCCCHHHHHHH
Q 025273          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----N-----DGVRQTIEQNTLLNRLGTTRDMAAA  228 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~d~a~~  228 (255)
                      .|+++|++++.|+++++.|+.+ +|++|+|+||+++|++......    .     +.....+....+.+++++|+|+|+.
T Consensus       158 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~  237 (263)
T 3ak4_A          158 HYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADV  237 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            9999999999999999999988 9999999999999998654210    0     2222334455678899999999999


Q ss_pred             HHHhcCCCCCCccccEEEeCCCccc
Q 025273          229 AAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       229 ~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +.+++++..++++|+.+++|||+..
T Consensus       238 v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          238 VVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHhCccccCCCCCEEEECcCEeC
Confidence            9999998888999999999999764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=2.7e-47  Score=312.91  Aligned_cols=244  Identities=26%  Similarity=0.392  Sum_probs=216.6

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEE-EeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVV-SSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      |.++.++.+|++|||||++|||++++++|+++|++|++ ..|+.+.++...+++...+.++.++++|+++.+++++++++
T Consensus        18 ~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   97 (267)
T 4iiu_A           18 LYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEH   97 (267)
T ss_dssp             -------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             hhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            44556688999999999999999999999999999866 55777788888888888788999999999999999999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChh
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAM  159 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~  159 (255)
                      +.+.++++|++|||||+.. ..++.+.+.++|++.+++|+.+++++++.+++.|.   +.++||++||..+..+.++...
T Consensus        98 ~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  176 (267)
T 4iiu_A           98 EIAQHGAWYGVVSNAGIAR-DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVN  176 (267)
T ss_dssp             HHHHHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHhCCccEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCch
Confidence            9999999999999999876 57788899999999999999999999999988763   5689999999999999999999


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      |+++|+|++.|+++++.|+.+ +|++++|+||+++|++....   +..........+.+++.+|+|+++.+.||+++...
T Consensus       177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~  253 (267)
T 4iiu_A          177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAG  253 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccc
Confidence            999999999999999999988 99999999999999987643   44455566677889999999999999999999999


Q ss_pred             CccccEEEeCCCc
Q 025273          239 YITGETLVVAGGM  251 (255)
Q Consensus       239 ~~~G~~i~~dgG~  251 (255)
                      +++|++|.+|||+
T Consensus       254 ~itG~~i~vdGG~  266 (267)
T 4iiu_A          254 YVTRQVISINGGM  266 (267)
T ss_dssp             TCCSCEEEESTTC
T ss_pred             CccCCEEEeCCCc
Confidence            9999999999996

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.5e-48  Score=315.99  Aligned_cols=245  Identities=32%  Similarity=0.481  Sum_probs=211.5

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |++..++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.    .+.++++|++++++++++++++
T Consensus         1 M~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~   76 (270)
T 1yde_A            1 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSET   76 (270)
T ss_dssp             ---CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHH
Confidence            445566889999999999999999999999999999999999887766655442    4788999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHh
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      .+.+|++|++|||||......++.+.+.++|++.+++|+.++++++++++|+|+ ..++||++||..+..+.+....|++
T Consensus        77 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  156 (270)
T 1yde_A           77 IRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVA  156 (270)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHH
Confidence            999999999999999875456788899999999999999999999999999985 4689999999988888888999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-ChhH---HHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-NDGV---RQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +|++++.|+++++.|+.+ +|++|+|+||+++|++...... ..+.   ........|.+++++|+|+++.+.||+++ .
T Consensus       157 sKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~  235 (270)
T 1yde_A          157 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-A  235 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-C
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-C
Confidence            999999999999999988 9999999999999998654321 1111   11122446888999999999999999987 6


Q ss_pred             CCccccEEEeCCCccc
Q 025273          238 SYITGETLVVAGGMPS  253 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~  253 (255)
                      ++++|++|.+|||...
T Consensus       236 ~~itG~~i~vdGG~~~  251 (270)
T 1yde_A          236 NFCTGIELLVTGGAEL  251 (270)
T ss_dssp             TTCCSCEEEESTTTTS
T ss_pred             CCcCCCEEEECCCeec
Confidence            8999999999999754

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1e-47  Score=314.62  Aligned_cols=239  Identities=31%  Similarity=0.466  Sum_probs=208.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++   ..++.++++|+++.++++++++++.+.+
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999987776655444   3578899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      |++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++.|+|++.++||++||..++ +.+....|++||+++
T Consensus        79 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~  156 (263)
T 2a4k_A           79 GRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGV  156 (263)
T ss_dssp             SCCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHH
T ss_pred             CCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHHH
Confidence            99999999999865 4677888999999999999999999999999999447899999999988 777788999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.|+++++.|+.+ ||++|+|+||+++|++....  .+..........+.+++++|+|+|+.++|++++...+++|+.+.
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~  234 (263)
T 2a4k_A          157 VGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALY  234 (263)
T ss_dssp             HHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEE
Confidence            9999999999988 99999999999999987653  23333444455678889999999999999999988899999999


Q ss_pred             eCCCccc
Q 025273          247 VAGGMPS  253 (255)
Q Consensus       247 ~dgG~~~  253 (255)
                      +|||...
T Consensus       235 vdgG~~~  241 (263)
T 2a4k_A          235 VDGGRSI  241 (263)
T ss_dssp             ESTTTTT
T ss_pred             ECCCccc
Confidence            9999764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-47  Score=316.48  Aligned_cols=245  Identities=30%  Similarity=0.458  Sum_probs=214.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCC---eEEEEEecCCCHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.   ++.++++|++++++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999888888887766555   899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCC----ccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCC-CCChh
Q 025273           86 KFGKIDVVVSNAAANPSVDS----ILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQ-SSMAM  159 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~-~~~~~  159 (255)
                      .+|++|+||||||... ..+    +.+.+.++|++.+++|+.++++++++++|.|+ .+++||++||..+..+. ++...
T Consensus        83 ~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  161 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY  161 (280)
T ss_dssp             HHSCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHH
T ss_pred             hcCCCCEEEECCCCCC-CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCcccH
Confidence            9999999999999865 344    77889999999999999999999999999985 34899999999998887 88999


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCCh-------hHHHHHHhhcccCCCCCHHHHHHHHHH
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND-------GVRQTIEQNTLLNRLGTTRDMAAAAAF  231 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~d~a~~~~~  231 (255)
                      |+++|++++.|+++++.|+.+ +|++|+|+||+++|++........       +.........+.+++++|+|+|+.++|
T Consensus       162 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~  241 (280)
T 1xkq_A          162 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF  241 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999987 999999999999999876432111       122222334577889999999999999


Q ss_pred             hcCCC-CCCccccEEEeCCCcccC
Q 025273          232 LASDD-ASYITGETLVVAGGMPSR  254 (255)
Q Consensus       232 l~s~~-~~~~~G~~i~~dgG~~~~  254 (255)
                      ++++. ..+++|+.+.+|||+..+
T Consensus       242 l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          242 LADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             hcCcccccCccCCeEEECCCcccc
Confidence            99887 789999999999998643

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-47  Score=310.66  Aligned_cols=240  Identities=31%  Similarity=0.472  Sum_probs=209.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+. +...+++.    + .++++|+++.++++++++++.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~   75 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL   75 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999877 65555553    4 788999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++  .++||++||..+..+.++...|++||+
T Consensus        76 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  154 (256)
T 2d1y_A           76 GRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG  154 (256)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence            99999999999875 467788899999999999999999999999999863  579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccc----cCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYI----TSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +++.|+++++.|+.+ +|++|+|+||+++|++....    ...+..........+.+++++|+|+|+.+++++++...++
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~  234 (256)
T 2d1y_A          155 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFI  234 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            999999999999988 99999999999999986543    1111222233445677889999999999999999888899


Q ss_pred             cccEEEeCCCcccC
Q 025273          241 TGETLVVAGGMPSR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      +|+.+.+|||...+
T Consensus       235 ~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          235 TGAILPVDGGMTAS  248 (256)
T ss_dssp             CSCEEEESTTGGGB
T ss_pred             CCCEEEECCCcccc
Confidence            99999999998654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-47  Score=306.99  Aligned_cols=235  Identities=29%  Similarity=0.423  Sum_probs=208.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +  +.++++|++++++++++++++.+.+|+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHLGR   77 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999987766554433   2  678899999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|+  +.++||++||.. ..+.++...|+++|+++
T Consensus        78 id~lvn~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~  155 (245)
T 1uls_A           78 LDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGV  155 (245)
T ss_dssp             CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHH
Confidence            999999999865 56778899999999999999999999999999986  357999999998 77888899999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.|+++++.|+.+ +|++|+|+||+++|++....  .+..........+.+++++|+|+|+.++|++++...+++|+.+.
T Consensus       156 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~  233 (245)
T 1uls_A          156 VGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLF  233 (245)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc--CHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence            9999999999988 99999999999999987543  22333344455678889999999999999999888899999999


Q ss_pred             eCCCccc
Q 025273          247 VAGGMPS  253 (255)
Q Consensus       247 ~dgG~~~  253 (255)
                      +|||+..
T Consensus       234 vdgG~~~  240 (245)
T 1uls_A          234 VDGGRTI  240 (245)
T ss_dssp             ESTTTTT
T ss_pred             ECCCccc
Confidence            9999764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.3e-48  Score=319.08  Aligned_cols=243  Identities=22%  Similarity=0.323  Sum_probs=214.9

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCC---eEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGA---SVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      +.++++|++|||||++|||++++++|+++|+   +|++++|+.+.++.+.+++...  +.++.+++||++++++++++++
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            3568899999999999999999999999998   9999999999999888888664  5789999999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChh
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAM  159 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~  159 (255)
                      ++.+.+|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|+|+  +.++||++||..+..+.+....
T Consensus       108 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~  187 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSI  187 (287)
T ss_dssp             TSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCch
Confidence            99999999999999999876567788999999999999999999999999999985  5789999999999999999999


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-Chh-HHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-NDG-VRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      |++||+|++.|+++++.|+.+ +|+||+|+||+++|++...... ... ......    .....+|+|+|+.++|++++.
T Consensus       188 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----~~~p~~pedvA~~v~~l~s~~  263 (287)
T 3rku_A          188 YCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYK----DTTPLMADDVADLIVYATSRK  263 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHT----TSCCEEHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhc----ccCCCCHHHHHHHHHHHhCCC
Confidence            999999999999999999988 9999999999999998643322 211 111121    122348999999999999999


Q ss_pred             CCCccccEEEeCCCccc
Q 025273          237 ASYITGETLVVAGGMPS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      ..+++|+++.+|+|...
T Consensus       264 ~~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          264 QNTVIADTLIFPTNQAS  280 (287)
T ss_dssp             TTEEEEEEEEEETTEEE
T ss_pred             CCeEecceEEeeCCCCC
Confidence            99999999999999764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.2e-47  Score=317.64  Aligned_cols=233  Identities=22%  Similarity=0.346  Sum_probs=210.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-------hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-------NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+       .++...+++...+.++.+++||+++.++++++++
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   85 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA   85 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            478999999999999999999999999999999999977       4667777777778899999999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCC-CCCh
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQ-SSMA  158 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~-~~~~  158 (255)
                      ++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|+  +.++||++||..+..+. +...
T Consensus        86 ~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  164 (285)
T 3sc4_A           86 KTVEQFGGIDICVNNASAIN-LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPT  164 (285)
T ss_dssp             HHHHHHSCCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSH
T ss_pred             HHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCc
Confidence            99999999999999999876 57888999999999999999999999999999997  45799999999988875 7789


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCC-cccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG-FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      .|++||+|++.|+++++.|+.+ |||||+|+|| +++|++.....         ....+.+++.+|+|+|+.++|++++.
T Consensus       165 ~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~---------~~~~~~~r~~~pedvA~~~~~l~s~~  235 (285)
T 3sc4_A          165 PYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLL---------GGDEAMARSRKPEVYADAAYVVLNKP  235 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHH---------TSCCCCTTCBCTHHHHHHHHHHHTSC
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhc---------cccccccCCCCHHHHHHHHHHHhCCc
Confidence            9999999999999999999988 9999999999 68998764332         22346788999999999999999998


Q ss_pred             CCCccccEEEeCCCcc
Q 025273          237 ASYITGETLVVAGGMP  252 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~  252 (255)
                      . +++|+.+.+|||+.
T Consensus       236 ~-~~tG~~i~~dgg~~  250 (285)
T 3sc4_A          236 S-SYTGNTLLCEDVLL  250 (285)
T ss_dssp             T-TCCSCEEEHHHHHH
T ss_pred             c-cccceEEEEcCchh
Confidence            8 99999999998864

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=7.8e-47  Score=312.92  Aligned_cols=244  Identities=27%  Similarity=0.342  Sum_probs=211.2

Q ss_pred             cCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++|++|||||+  +|||++++++|+++|++|++++|+.+ .+...+++....+.+.++++|+++.++++++++++.+.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4889999999999  99999999999999999999999975 34444555443234778999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHh
Q 025273           87 FGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      +|++|+||||||+...   ..++.+.+.++|++.+++|+.|+++++++++|.|+ ++++||++||..+..+.+....|++
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  176 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGI  176 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHH
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHH
Confidence            9999999999998642   25677889999999999999999999999999987 5689999999999999889999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ||++++.|+++++.|+.+ +|++|+|+||+++|++.......+..........+.+++++|+|+++.++|++++...+++
T Consensus       177 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~t  256 (285)
T 2p91_A          177 AKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAIT  256 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCC
Confidence            999999999999999987 9999999999999998754432233334445566888899999999999999998888999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+.+.+|||+..
T Consensus       257 G~~~~vdgg~~~  268 (285)
T 2p91_A          257 GEVVHVDNGYHI  268 (285)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECCCccc
Confidence            999999999753

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=9.4e-47  Score=312.90  Aligned_cols=241  Identities=28%  Similarity=0.394  Sum_probs=210.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHHH-hcCCeEEEEEecCCC----HHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLK-ARGIEVIGVVCHVSN----GQQRKNLIN   81 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~-~~~~~~~~~~~Dv~~----~~~v~~~~~   81 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+. +.++.+.+++. ..+.++.++++|+++    .++++++++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            457899999999999999999999999999999999998 88888877776 456789999999999    999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCc-----cC-----CCHHHHHHHHHHHhHHHHHHHHHHhhcccC--------CCeEE
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSI-----LQ-----TKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVV  143 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~iv  143 (255)
                      ++.+.+|++|+||||||+.. ..++     .+     .+.++|++.+++|+.+++.+++.++|.|++        .++||
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv  177 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAFY-PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV  177 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCC-CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence            99999999999999999865 3444     55     788999999999999999999999999864        57999


Q ss_pred             EEcccCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCC-CC
Q 025273          144 LISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRL-GT  221 (255)
Q Consensus       144 ~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~  221 (255)
                      ++||..++.+.++...|++||+|++.|+++++.|+.+ +|+||+|+||+++|++ . .  .+.....+....+.+++ .+
T Consensus       178 ~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~--~~~~~~~~~~~~p~~r~~~~  253 (288)
T 2x9g_A          178 NLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M--GEEEKDKWRRKVPLGRREAS  253 (288)
T ss_dssp             EECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S--CHHHHHHHHHTCTTTSSCCC
T ss_pred             EEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c--ChHHHHHHHhhCCCCCCCCC
Confidence            9999999999999999999999999999999999988 9999999999999998 3 2  12223334445677888 89


Q ss_pred             HHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          222 TRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       222 ~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+|+|+.++||+++..++++|+.|.+|||+..
T Consensus       254 pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          254 AEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence            99999999999999889999999999999754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=4.6e-47  Score=309.48  Aligned_cols=241  Identities=25%  Similarity=0.382  Sum_probs=211.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+.+  +...+++...+.++.++++|+++.++++++++++.+.+|+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999876  4555666555678999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|+||||||... ..++.+.+.++|++.+++|+.+++++++.++|.|+  +.++||++||..++.+.+....|+++|+++
T Consensus        80 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  158 (255)
T 2q2v_A           80 VDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGV  158 (255)
T ss_dssp             CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHH
Confidence            999999999865 46778889999999999999999999999999986  357999999999999989999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-ChhH---H----HHH-HhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-NDGV---R----QTI-EQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-~~~~---~----~~~-~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +.|+++++.|+.+ +|++|+|+||+++|++...... ....   .    ..+ ....+.+++++|+|+++.++|++++..
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~  238 (255)
T 2q2v_A          159 VGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAG  238 (255)
T ss_dssp             HHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence            9999999999988 9999999999999998654221 0111   1    222 344677889999999999999999888


Q ss_pred             CCccccEEEeCCCccc
Q 025273          238 SYITGETLVVAGGMPS  253 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~  253 (255)
                      ++++|+.+.+|||+..
T Consensus       239 ~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          239 SQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             CCCCCCEEEECCCccC
Confidence            8999999999999864

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-47  Score=311.42  Aligned_cols=245  Identities=24%  Similarity=0.317  Sum_probs=205.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++.+|++|||||++|||++++++|+++|++|++++|+.+. .+.+.+.+...+.++.+++||+++.++++++++++.+.
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            34668999999999999999999999999999999877654 34444444444678999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCC-CCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEccc-Cc-cCCCCCChhhH
Q 025273           87 FGKIDVVVSNAAAN-PSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSI-AG-YQPQSSMAMYG  161 (255)
Q Consensus        87 ~g~~d~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~-~~-~~~~~~~~~y~  161 (255)
                      ++++|++|||||.. ....++.+.+.++|++.+++|+.++++++++++|+|+  +.++||++||. .+ ..+.++...|+
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~  162 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFA  162 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHH
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhH
Confidence            99999999999942 2356788899999999999999999999999999986  45899999988 43 55677889999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      ++|+|++.|+++++.|+.+ +|++|+|+||+++|++.....  +..........+.+++++|+|+++.+.|++++...++
T Consensus       163 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~i  240 (264)
T 3i4f_A          163 AAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI--QEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMI  240 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH--HHHHHC--------CCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc--HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCC
Confidence            9999999999999999988 999999999999999876543  2333444556688899999999999999999988999


Q ss_pred             cccEEEeCCCcccC
Q 025273          241 TGETLVVAGGMPSR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      +|++|.+|||+..+
T Consensus       241 tG~~i~vdGG~~~~  254 (264)
T 3i4f_A          241 TGTIIEVTGAVDVI  254 (264)
T ss_dssp             CSCEEEESCSCCCC
T ss_pred             CCcEEEEcCceeec
Confidence            99999999998764

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=6.3e-47  Score=308.10  Aligned_cols=237  Identities=18%  Similarity=0.204  Sum_probs=195.4

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.+++||++++++++++++++.+.
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            34578999999999999999999999999999999999999999999999888889999999999999999999999998


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                       |++|+||||||+.. ..++.+.+.++|++.+++|+.|++.++++++|+|+  +.++||++||..+..+.++...|++||
T Consensus        82 -g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (252)
T 3h7a_A           82 -APLEVTIFNVGANV-NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAK  159 (252)
T ss_dssp             -SCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHH
T ss_pred             -CCceEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHH
Confidence             99999999999876 57888999999999999999999999999999986  468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeE-EEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          165 TALLGLTKALAAEMAP-DTRV-NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v-~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      +|++.|+++++.|+.+ +||| |+|+||+++|++......  ..........+.+ +.+|+|+|+.++|+++++.+.++|
T Consensus       160 aa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~~~~  236 (252)
T 3h7a_A          160 FGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE--QMFGKDALANPDL-LMPPAAVAGAYWQLYQQPKSAWTF  236 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CCHHHHHHHHHHHHHCCGGGBCS
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch--hhhhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhccee
Confidence            9999999999999988 9999 999999999998865532  2222233344555 889999999999999988888889


Q ss_pred             cEEEeC
Q 025273          243 ETLVVA  248 (255)
Q Consensus       243 ~~i~~d  248 (255)
                      ++....
T Consensus       237 ~i~~~~  242 (252)
T 3h7a_A          237 EMEIRP  242 (252)
T ss_dssp             EEEEBC
T ss_pred             eEEeee
Confidence            875543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=5.6e-47  Score=311.77  Aligned_cols=241  Identities=26%  Similarity=0.383  Sum_probs=206.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .++|++|||||++|||++++++|+++|++|+++ .|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            357999999999999999999999999999776 7888888888888887788999999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-----CCeEEEEcccCccCCCC-CChhhHh
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQS-SMAMYGV  162 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~iss~~~~~~~~-~~~~y~~  162 (255)
                      ++|+||||||+.....++.+.+.++|++.+++|+.+++++++.++|.|++     .++||++||..+..+.+ .+..|++
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  183 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAA  183 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHH
Confidence            99999999998765578889999999999999999999999999998853     67999999999877665 6788999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ||+|++.|+++++.|+.+ +|++++|+||+++|++..... .+..........+.+++++|+|+|+.++|++++...+++
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~t  262 (272)
T 4e3z_A          184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG-LPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVT  262 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC-ChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCcccccc
Confidence            999999999999999988 999999999999999876432 222333445566788899999999999999999989999


Q ss_pred             ccEEEeCCCc
Q 025273          242 GETLVVAGGM  251 (255)
Q Consensus       242 G~~i~~dgG~  251 (255)
                      |++|++|||.
T Consensus       263 G~~i~vdgG~  272 (272)
T 4e3z_A          263 GSILNVSGGR  272 (272)
T ss_dssp             SCEEEESTTC
T ss_pred             CCEEeecCCC
Confidence            9999999995

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=9.6e-47  Score=317.98  Aligned_cols=240  Identities=28%  Similarity=0.367  Sum_probs=212.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHHHH-hcCCeEEEEEecCCCHH------------
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLK-ARGIEVIGVVCHVSNGQ------------   74 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~------------   74 (255)
                      ++++|++|||||++|||++++++|+++|++|++++ |+.+.++.+.+++. ..+.++.++++|+++.+            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            47899999999999999999999999999999999 99988888888776 44678999999999999            


Q ss_pred             -----HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCC--------------HHHHHHHHHHHhHHHHHHHHHHhhc
Q 025273           75 -----QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTK--------------ESVLDKLWDINVKSSILLLQDAAPH  135 (255)
Q Consensus        75 -----~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~~  135 (255)
                           +++++++++.+.+|++|+||||||+.. ..++.+.+              .++|++.+++|+.+++.+++.++|.
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 999999999999999999999999865 45667777              8999999999999999999999999


Q ss_pred             cc--C------CCeEEEEcccCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhH
Q 025273          136 LQ--K------GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV  206 (255)
Q Consensus       136 ~~--~------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~  206 (255)
                      |+  +      .++||++||..+..+.++...|+++|++++.|++.++.|+.+ +|+||+|+||+++|++ ...   +..
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~---~~~  277 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP---PAV  277 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC---HHH
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc---HHH
Confidence            85  3      579999999999999999999999999999999999999988 9999999999999998 322   333


Q ss_pred             HHHHHhhcccC-CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          207 RQTIEQNTLLN-RLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       207 ~~~~~~~~~~~-~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ........+.+ ++++|+|+|+.++||+++...+++|++|.+|||+..
T Consensus       278 ~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          278 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             HHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            33444556777 899999999999999998889999999999999754

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.6e-47  Score=310.72  Aligned_cols=239  Identities=27%  Similarity=0.365  Sum_probs=210.0

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++++|++++++++++++++.+.+|
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999999987777665544   45788999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|+  +.++||++||..++.+.++...|+++|++
T Consensus        79 ~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  157 (254)
T 1hdc_A           79 SVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             CCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence            9999999999865 46778889999999999999999999999999986  46899999999999998999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCC-CHHHHHHHHHHhcCCCCCCccccE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLG-TTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      ++.|+++++.|+.+ +|++|+|+||+++|++.......  .........+.+++. +|+|+|+.+++++++...+++|+.
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~  235 (254)
T 1hdc_A          158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR--QGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAE  235 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC--CSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchh--HHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCE
Confidence            99999999999987 99999999999999986543211  111122234667888 999999999999998888999999


Q ss_pred             EEeCCCccc
Q 025273          245 LVVAGGMPS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +.+|||+..
T Consensus       236 ~~vdgG~~~  244 (254)
T 1hdc_A          236 LAVDGGWTT  244 (254)
T ss_dssp             EEESTTTTT
T ss_pred             EEECCCccc
Confidence            999999754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.2e-47  Score=321.37  Aligned_cols=243  Identities=27%  Similarity=0.313  Sum_probs=213.1

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC----------chhHHHHHHHHHhcCCeEEEEEecCCCH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK----------QKNVDEAVVKLKARGIEVIGVVCHVSNG   73 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   73 (255)
                      +.+|..++||++|||||++|||++++++|+++|++|++++|+          .+.++...+++...+.++.++++|+++.
T Consensus        19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW   98 (322)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH
T ss_pred             CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence            445667999999999999999999999999999999999998          6778888888888788999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--------CCeEEEE
Q 025273           74 QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLI  145 (255)
Q Consensus        74 ~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~iv~i  145 (255)
                      ++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.+++.+++++.++|++        +++||++
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~i  177 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINT  177 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEE
Confidence            9999999999999999999999999876 567889999999999999999999999999998852        3799999


Q ss_pred             cccCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHH
Q 025273          146 SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRD  224 (255)
Q Consensus       146 ss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  224 (255)
                      ||..+..+.+....|++||+|++.|+++++.|+.+ ||+||+|+|| +.|++..........     ......+..+|+|
T Consensus       178 sS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~-----~~~~~~~~~~ped  251 (322)
T 3qlj_A          178 SSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA-----TQDQDFDAMAPEN  251 (322)
T ss_dssp             CCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTTCGGG
T ss_pred             cCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh-----ccccccCCCCHHH
Confidence            99999999999999999999999999999999988 9999999999 999987655432111     1112234579999


Q ss_pred             HHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          225 MAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       225 ~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++.++||+++..++++|++|.+|||...
T Consensus       252 va~~v~~L~s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          252 VSPLVVWLGSAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             THHHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            99999999999999999999999999854

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2e-46  Score=309.13  Aligned_cols=240  Identities=30%  Similarity=0.415  Sum_probs=207.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhc-CCeEEEEEecCCCH----HHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKAR-GIEVIGVVCHVSNG----QQRKNLINQ   82 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~----~~v~~~~~~   82 (255)
                      ++++|++|||||++|||++++++|+++|++|++++| +.+.++.+.+++... +.++.++++|+++.    +++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            467999999999999999999999999999999999 888888888777655 67899999999999    999999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCH-----------HHHHHHHHHHhHHHHHHHHHHhhccc-CC------CeEEE
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKE-----------SVLDKLWDINVKSSILLLQDAAPHLQ-KG------SSVVL  144 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~-~~------~~iv~  144 (255)
                      +.+.+|++|+||||||+.. ..++.+.+.           ++|++.+++|+.++++++++++|.|+ +.      ++||+
T Consensus        88 ~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~  166 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN  166 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCC-CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEE
Confidence            9999999999999999865 456677777           99999999999999999999999985 33      79999


Q ss_pred             EcccCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCC-CCCH
Q 025273          145 ISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNR-LGTT  222 (255)
Q Consensus       145 iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  222 (255)
                      +||..++.+.++...|++||++++.|+++++.|+.+ +|++|+|+||+++|+ . ..  .+..........+.++ +.+|
T Consensus       167 isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~--~~~~~~~~~~~~p~~r~~~~~  242 (276)
T 1mxh_A          167 LCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AM--PQETQEEYRRKVPLGQSEASA  242 (276)
T ss_dssp             ECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SS--CHHHHHHHHTTCTTTSCCBCH
T ss_pred             ECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cC--CHHHHHHHHhcCCCCCCCCCH
Confidence            999999999999999999999999999999999988 999999999999999 2 21  2333333444567788 8999


Q ss_pred             HHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          223 RDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       223 ~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|+++.++|++++...+++|+.+.+|||+..
T Consensus       243 ~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          243 AQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence            9999999999998888999999999999754

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5e-47  Score=312.97  Aligned_cols=245  Identities=32%  Similarity=0.481  Sum_probs=204.0

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHH---hcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK---ARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.   ..+.++.++++|++++++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999988888777773   2345789999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCC----CHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCc-cCCCCCChh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQT----KESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAG-YQPQSSMAM  159 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~-~~~~~~~~~  159 (255)
                      .+|++|+||||||... ..++.+.    +.++|++.+++|+.++++++++++|.|+ .+++||++||..+ ..+.++...
T Consensus        83 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  161 (278)
T 1spx_A           83 KFGKLDILVNNAGAAI-PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPY  161 (278)
T ss_dssp             HHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHH
T ss_pred             HcCCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCCccH
Confidence            9999999999999865 3556666    8999999999999999999999999985 3589999999998 888889999


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-ChhH------HHHHHhhcccCCCCCHHHHHHHHHH
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-NDGV------RQTIEQNTLLNRLGTTRDMAAAAAF  231 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~d~a~~~~~  231 (255)
                      |+++|++++.|+++++.|+.+ +|++|+|+||+++|++...... .+..      ........+.+++++|+|+++.+.+
T Consensus       162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~  241 (278)
T 1spx_A          162 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF  241 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHH
Confidence            999999999999999999988 9999999999999998654311 1111      2333445677889999999999999


Q ss_pred             hcCCCCCC-ccccEEEeCCCcccC
Q 025273          232 LASDDASY-ITGETLVVAGGMPSR  254 (255)
Q Consensus       232 l~s~~~~~-~~G~~i~~dgG~~~~  254 (255)
                      ++++...+ ++|+.+.+|||...+
T Consensus       242 l~s~~~~~~~tG~~~~vdgG~~~~  265 (278)
T 1spx_A          242 LADRKTSSYIIGHQLVVDGGSSLI  265 (278)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HcCccccCcccCcEEEECCCcccc
Confidence            99887666 999999999998654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-46  Score=307.05  Aligned_cols=239  Identities=24%  Similarity=0.411  Sum_probs=202.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.+++||+++.++++++++++.+.+|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999999999999999999999999999888889999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+  +.++||++||..+..+.+....|++||+|+
T Consensus        82 iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal  160 (264)
T 3tfo_A           82 IDVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAV  160 (264)
T ss_dssp             CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence            999999999875 57888999999999999999999999999999985  568999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      ++|+++++.|+ ++||||+|+||+++|++........... ..  .......++|+|+|+.++|++++...+.+|+.+..
T Consensus       161 ~~l~~~la~e~-~gIrvn~v~PG~v~T~~~~~~~~~~~~~-~~--~~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~  236 (264)
T 3tfo_A          161 RAISDGLRQES-TNIRVTCVNPGVVESELAGTITHEETMA-AM--DTYRAIALQPADIARAVRQVIEAPQSVDTTEITIR  236 (264)
T ss_dssp             HHHHHHHHHHC-SSEEEEEEEECCC--------------------------CCCHHHHHHHHHHHHHSCTTEEEEEEEEE
T ss_pred             HHHHHHHHHhC-CCCEEEEEecCCCcCcccccccchhHHH-HH--HhhhccCCCHHHHHHHHHHHhcCCccCccceEEEe
Confidence            99999999998 5999999999999999876553322111 00  01112356999999999999999999999999999


Q ss_pred             CCCccc
Q 025273          248 AGGMPS  253 (255)
Q Consensus       248 dgG~~~  253 (255)
                      ++|...
T Consensus       237 p~~~~~  242 (264)
T 3tfo_A          237 PTASGN  242 (264)
T ss_dssp             ECC---
T ss_pred             cCcccc
Confidence            888653

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.5e-47  Score=312.64  Aligned_cols=235  Identities=23%  Similarity=0.360  Sum_probs=195.8

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.   .++   .+.++.++++|+++.++++++++.+.+ +
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~-~   77 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VAD---LGDRARFAAADVTDEAAVASALDLAET-M   77 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHH---TCTTEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHh---cCCceEEEECCCCCHHHHHHHHHHHHH-h
Confidence            357899999999999999999999999999999999965432   222   256899999999999999999998877 9


Q ss_pred             CCCCEEEEcCCCCCCC---CCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC----------CCeEEEEcccCccCCC
Q 025273           88 GKIDVVVSNAAANPSV---DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----------GSSVVLISSIAGYQPQ  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~~~iv~iss~~~~~~~  154 (255)
                      |++|+||||||+....   .+..+.+.++|++.+++|+.++++++++++|+|++          .++||++||..++.+.
T Consensus        78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tl3_A           78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ  157 (257)
T ss_dssp             SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence            9999999999975421   12235889999999999999999999999999864          5699999999999988


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhccc-CCCCCHHHHHHHHHHh
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDMAAAAAFL  232 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l  232 (255)
                      ++...|++||+|++.|+++++.|+.+ +|++|+|+||+++|++....  .+..........+. +++++|+|+++.++||
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l  235 (257)
T 3tl3_A          158 IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL--PEEARASLGKQVPHPSRLGNPDEYGALAVHI  235 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc--cHHHHHHHHhcCCCCCCccCHHHHHHHHHHH
Confidence            88999999999999999999999988 99999999999999988654  33444555556676 8999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCccc
Q 025273          233 ASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++  .+++|++|.+|||+..
T Consensus       236 ~s~--~~itG~~i~vdGG~~~  254 (257)
T 3tl3_A          236 IEN--PMLNGEVIRLDGAIRM  254 (257)
T ss_dssp             HHC--TTCCSCEEEESTTC--
T ss_pred             hcC--CCCCCCEEEECCCccC
Confidence            976  7899999999999875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=2.9e-46  Score=305.56  Aligned_cols=246  Identities=32%  Similarity=0.439  Sum_probs=218.2

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +.++++|++|||||+||||++++++|+++|++|++++| +.+.++.+.+++...+.++.++++|+++.++++++++++.+
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999 77777777777776677899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.+++++++.+++.|++   .++||++||..+..+.++...|++
T Consensus        82 ~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  160 (261)
T 1gee_A           82 EFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA  160 (261)
T ss_dssp             HHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHH
Confidence            9999999999999865 466778899999999999999999999999999863   579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +|++++.++++++.|+.+ +|+++.|+||+++|++.......+..........+.+++.+|+|+++.+++++++...+++
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  240 (261)
T 1gee_A          161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVT  240 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence            999999999999999987 9999999999999998765432333333344455778889999999999999998788899


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+.+.+|||...
T Consensus       241 G~~~~v~gg~~~  252 (261)
T 1gee_A          241 GITLFADGGMTL  252 (261)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEEcCCccc
Confidence            999999999864

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=4.7e-47  Score=312.52  Aligned_cols=231  Identities=23%  Similarity=0.373  Sum_probs=202.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-------HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-------VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.       ++...+++...+.++.+++||+++++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            35689999999999999999999999999999999999764       56667777767889999999999999999999


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCC--CCC
Q 025273           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQP--QSS  156 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~--~~~  156 (255)
                      +++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|+  +.++||++||..+..+  .+.
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  160 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIW-LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA  160 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCccc-CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCC
Confidence            999999999999999999875 56788899999999999999999999999999986  4689999999998877  677


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCC-cccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG-FVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      ...|++||+|++.|+++++.|+.+ ||+||+|+|| +++|++......           .+..++.+|+|+|+.+.||++
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~s  229 (274)
T 3e03_A          161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPG-----------VDAAACRRPEIMADAAHAVLT  229 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------C-----------CCGGGSBCTHHHHHHHHHHHT
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhccc-----------ccccccCCHHHHHHHHHHHhC
Confidence            889999999999999999999988 9999999999 699998743221           123346799999999999999


Q ss_pred             CCCCCccccEEEeCCCc
Q 025273          235 DDASYITGETLVVAGGM  251 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~  251 (255)
                      +..+++||+.+ +|||.
T Consensus       230 ~~~~~itG~~i-~~~g~  245 (274)
T 3e03_A          230 REAAGFHGQFL-IDDEV  245 (274)
T ss_dssp             SCCTTCCSCEE-EHHHH
T ss_pred             ccccccCCeEE-EcCcc
Confidence            99999999998 77664

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=9.4e-47  Score=307.29  Aligned_cols=240  Identities=25%  Similarity=0.340  Sum_probs=211.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++++|++++++++++++++.+.+|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999999988877776665   56789999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-CCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++ +++||++||..++.+.++...|++||+++
T Consensus        80 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  158 (253)
T 1hxh_A           80 TLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAV  158 (253)
T ss_dssp             SCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCccHHHHHHHH
Confidence            9999999999865 467788999999999999999999999999999863 48999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC---CeeEEEEeCCcccCCccccccCChhHHHH-HHh---hcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          168 LGLTKALAAEMAP---DTRVNCVAPGFVPTHFAEYITSNDGVRQT-IEQ---NTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       168 ~~l~~~la~e~~~---~v~v~~v~pg~v~t~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +.|+++++.|+.+   +|++|+|+||+++|++....... ..... ...   ..+.+++.+|+|+|+.++|++++..+++
T Consensus       159 ~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~  237 (253)
T 1hxh_A          159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK-GVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM  237 (253)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT-TCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccch-hhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccCC
Confidence            9999999999854   79999999999999987542221 11111 222   4577888999999999999999988899


Q ss_pred             cccEEEeCCCccc
Q 025273          241 TGETLVVAGGMPS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      +|+.+.+|||+..
T Consensus       238 tG~~~~vdgG~~~  250 (253)
T 1hxh_A          238 SGSELHADNSILG  250 (253)
T ss_dssp             CSCEEEESSSCTT
T ss_pred             CCcEEEECCCccc
Confidence            9999999999764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.5e-46  Score=305.07  Aligned_cols=235  Identities=29%  Similarity=0.415  Sum_probs=209.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.   .++.++++|+++.++++++++++.+.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~   79 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF   79 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh---cCceEEEecCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999887776666553   258889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||... ..++.+.+.++|++.+++|+.+++++++.++|.|+  +.++||++||..++.+.++...|+++|+
T Consensus        80 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (260)
T 1nff_A           80 GGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF  158 (260)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence            99999999999875 46778889999999999999999999999999986  4689999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.|+++++.|+.+ +|++|+|+||+++|++.. . ..+.    .. ..+.+++.+|+|+++.+.+++++...+++|+.
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~~~----~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~  231 (260)
T 1nff_A          159 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-VPED----IF-QTALGRAAEPVEVSNLVVYLASDESSYSTGAE  231 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-SCTT----CS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-chhh----HH-hCccCCCCCHHHHHHHHHHHhCccccCCcCCE
Confidence            999999999999987 999999999999999865 2 1111    11 34677889999999999999998888999999


Q ss_pred             EEeCCCccc
Q 025273          245 LVVAGGMPS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +.+|||...
T Consensus       232 ~~v~gG~~~  240 (260)
T 1nff_A          232 FVVDGGTVA  240 (260)
T ss_dssp             EEESTTGGG
T ss_pred             EEECCCeec
Confidence            999999764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=5.5e-47  Score=308.07  Aligned_cols=233  Identities=24%  Similarity=0.313  Sum_probs=200.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--C-CeEEEEEecCCCHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--G-IEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...  + .++.++++|+++.++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999888887664  3 688999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHh
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      +.+|++|+||||||+.. ..++ +.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++
T Consensus        83 ~~~g~iD~lvnnAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  160 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFM-DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGS  160 (250)
T ss_dssp             HHHCCEEEEEECCCCCC-CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHH
T ss_pred             HhcCCCCEEEECCCcCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHH
Confidence            99999999999999875 3455 778899999999999999999999999985  5689999999999987777999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC-Cc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS-YI  240 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~-~~  240 (255)
                      ||+|+++|+++++.|+.+ +||+|+|+||+++|++......          ..+.+++.+|+|+++.+.|+++++.. .+
T Consensus       161 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----------~~~~~~~~~p~dva~~v~~l~s~~~~~~~  230 (250)
T 3nyw_A          161 TKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT----------PFKDEEMIQPDDLLNTIRCLLNLSENVCI  230 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTC----------CSCGGGSBCHHHHHHHHHHHHTSCTTEEC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCC----------CcccccCCCHHHHHHHHHHHHcCCCceEe
Confidence            999999999999999988 9999999999999998754432          12456688999999999999997655 67


Q ss_pred             cccEEEeCCCcc
Q 025273          241 TGETLVVAGGMP  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      ++..|.+|||..
T Consensus       231 ~~~~i~vd~~~~  242 (250)
T 3nyw_A          231 KDIVFEMKKSII  242 (250)
T ss_dssp             CEEEEEEHHHHH
T ss_pred             eEEEEEeecccc
Confidence            888999999853

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-46  Score=307.27  Aligned_cols=230  Identities=29%  Similarity=0.404  Sum_probs=204.3

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+..+         ..++.++++|++++++++++++++.+.
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999876432         237889999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccC--CCCCChhhHh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQ--PQSSMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~--~~~~~~~y~~  162 (255)
                      +|++|++|||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+  +.++||++||..+..  +..+...|++
T Consensus        94 ~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~  172 (260)
T 3un1_A           94 FGRIDSLVNNAGVFL-AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASL  172 (260)
T ss_dssp             HSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHH
T ss_pred             CCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHH
Confidence            999999999999876 57788899999999999999999999999999985  457999999988764  3456689999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ||+|++.|+++++.|+.+ ||++|+|+||+++|++...     ..........+.+++++|+|+|++++||  +...+++
T Consensus       173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-----~~~~~~~~~~p~~r~~~~~dva~av~~L--~~~~~it  245 (260)
T 3un1_A          173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-----ETHSTLAGLHPVGRMGEIRDVVDAVLYL--EHAGFIT  245 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-----GGHHHHHTTSTTSSCBCHHHHHHHHHHH--HHCTTCC
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-----HHHHHHhccCCCCCCcCHHHHHHHHHHh--cccCCCC
Confidence            999999999999999988 9999999999999998642     3344556667899999999999999999  4567899


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |++|++|||...
T Consensus       246 G~~i~vdGG~~~  257 (260)
T 3un1_A          246 GEILHVDGGQNA  257 (260)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECCCeec
Confidence            999999999875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=3.4e-46  Score=308.49  Aligned_cols=242  Identities=26%  Similarity=0.394  Sum_probs=210.6

Q ss_pred             cccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 025273            3 KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         3 ~~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      .|.++.++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.+++||+++.+++++++++
T Consensus        21 ~m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~   97 (281)
T 3ppi_A           21 SMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEA   97 (281)
T ss_dssp             ---CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             hhhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHH
Confidence            455567899999999999999999999999999999999999998888777766   56899999999999999999999


Q ss_pred             HHHHhCCCCEEEEc-CCCCCCCCCc-----cCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--------CCCeEEEEccc
Q 025273           83 TIEKFGKIDVVVSN-AAANPSVDSI-----LQTKESVLDKLWDINVKSSILLLQDAAPHLQ--------KGSSVVLISSI  148 (255)
Q Consensus        83 ~~~~~g~~d~lv~~-ag~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--------~~~~iv~iss~  148 (255)
                      + +.++++|++||| +|+.. ...+     .+.+.++|++.+++|+.+++++++.+++.|.        +.++||++||.
T Consensus        98 ~-~~~~~id~lv~~aag~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  175 (281)
T 3ppi_A           98 A-NQLGRLRYAVVAHGGFGV-AQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASI  175 (281)
T ss_dssp             H-TTSSEEEEEEECCCCCCC-CCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCG
T ss_pred             H-HHhCCCCeEEEccCcccc-cccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecc
Confidence            9 788999999999 55433 3333     3678899999999999999999999999884        35799999999


Q ss_pred             CccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhccc-CCCCCHHHHH
Q 025273          149 AGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDMA  226 (255)
Q Consensus       149 ~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a  226 (255)
                      .+..+.++...|++||+|++.|+++++.|+.+ +|++++|+||+++|++....  .+..........+. +++.+|+|+|
T Consensus       176 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~pedvA  253 (281)
T 3ppi_A          176 AGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFA  253 (281)
T ss_dssp             GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT--CHHHHHHHHHTCCSSSSCBCHHHHH
T ss_pred             cccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc--cHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            99999999999999999999999999999988 99999999999999988654  23444455555666 8899999999


Q ss_pred             HHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          227 AAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       227 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +.++|++++  .+++|++|.+|||+..
T Consensus       254 ~~v~~l~s~--~~~tG~~i~vdGG~~~  278 (281)
T 3ppi_A          254 DAAAFLLTN--GYINGEVMRLDGAQRF  278 (281)
T ss_dssp             HHHHHHHHC--SSCCSCEEEESTTCCC
T ss_pred             HHHHHHHcC--CCcCCcEEEECCCccc
Confidence            999999974  6899999999999875

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=2.8e-45  Score=299.47  Aligned_cols=251  Identities=28%  Similarity=0.388  Sum_probs=218.9

Q ss_pred             ccccc-ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Q 025273            3 KMKMA-KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         3 ~~~~~-~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      +|.|. +++++|++|||||+||||++++++|+++|++|++++|+.+.++...+++...+.++.++++|+++.++++++++
T Consensus         3 ~~~~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   82 (260)
T 3awd_A            3 HMYMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVR   82 (260)
T ss_dssp             -CTTGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             cccccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            34442 35789999999999999999999999999999999999988888878887767789999999999999999999


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCC--
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSM--  157 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~--  157 (255)
                      ++.+.++++|++|||||......++.+.+.++|++.+++|+.+++++++.+.+.|+  +.++||++||..+..+.+..  
T Consensus        83 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  162 (260)
T 3awd_A           83 SVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQ  162 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCc
Confidence            99999999999999999865346778889999999999999999999999999885  46899999999988777666  


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ..|+++|++++.|+++++.|+.+ +|+++.|+||+++|++.......+..........+.+++.+|+|+++.+.+++++.
T Consensus       163 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  242 (260)
T 3awd_A          163 AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDA  242 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCch
Confidence            89999999999999999999987 99999999999999987621122334444445567788999999999999999988


Q ss_pred             CCCccccEEEeCCCccc
Q 025273          237 ASYITGETLVVAGGMPS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      ..+++|+.+++|||...
T Consensus       243 ~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          243 ASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             hccCCCcEEEECCceec
Confidence            88899999999999753

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=3.5e-47  Score=308.21  Aligned_cols=232  Identities=25%  Similarity=0.337  Sum_probs=204.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGL-EGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .++|++|||||++|||++++++|++ .|+.|++++|+.+.          ...++.++++|+++.++++++++.+.  ++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~   69 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--NV   69 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--TC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--hC
Confidence            3579999999999999999999999 78999999998652          12367889999999999999996554  77


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++.++||++||..++.+.++...|++||+|++
T Consensus        70 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~  148 (244)
T 4e4y_A           70 SFDGIFLNAGILI-KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIA  148 (244)
T ss_dssp             CEEEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHH
T ss_pred             CCCEEEECCccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHH
Confidence            9999999999876 467889999999999999999999999999999987789999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC---------hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      .|+++++.|+.+ +|++|+|+||+++|++.......         ++.........+.+++.+|+|+|+.++||+++...
T Consensus       149 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~  228 (244)
T 4e4y_A          149 QMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSK  228 (244)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccc
Confidence            999999999988 99999999999999987654321         12344556667889999999999999999999999


Q ss_pred             CccccEEEeCCCcccC
Q 025273          239 YITGETLVVAGGMPSR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      +++|++|.+|||+..+
T Consensus       229 ~itG~~i~vdGG~~~~  244 (244)
T 4e4y_A          229 FMTGGLIPIDGGYTAQ  244 (244)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             cccCCeEeECCCccCC
Confidence            9999999999998753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=5.6e-46  Score=302.23  Aligned_cols=234  Identities=26%  Similarity=0.359  Sum_probs=190.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.        . .. .+.++++|++++++++++++++.+.++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~-~~-~~~~~~~D~~d~~~~~~~~~~~~~~~g   73 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------E-QY-PFATEVMDVADAAQVAQVCQRLLAETE   73 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------S-CC-SSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------h-cC-CceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999998652        1 11 267889999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|+  +.++||++||..++.+.++...|+++|++
T Consensus        74 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  152 (250)
T 2fwm_X           74 RLDALVNAAGILR-MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAA  152 (250)
T ss_dssp             CCCEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCcCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHH
Confidence            9999999999865 46778899999999999999999999999999985  46899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHH-HHHh-------hcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQ-TIEQ-------NTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      ++.|+++++.|+.+ +|++|+|+||+++|++.......+.... ....       ..|.+++.+|+|+|+.+.|++++..
T Consensus       153 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~  232 (250)
T 2fwm_X          153 LKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLA  232 (250)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999988 9999999999999998654321111111 1222       4567789999999999999999988


Q ss_pred             CCccccEEEeCCCccc
Q 025273          238 SYITGETLVVAGGMPS  253 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~  253 (255)
                      ++++|+.+.+|||...
T Consensus       233 ~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          233 SHITLQDIVVDGGSTL  248 (250)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             cCCCCCEEEECCCccc
Confidence            8999999999999764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2.1e-45  Score=300.85  Aligned_cols=235  Identities=30%  Similarity=0.390  Sum_probs=205.4

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      |..+++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA  103 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            35578999999999999999999999999999999999999999998888888889999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||......++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..+..+.++...|+++|
T Consensus       104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  183 (262)
T 3rkr_A          104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASK  183 (262)
T ss_dssp             HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHH
Confidence            999999999999855467888899999999999999999999999999985  568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +|++.|+++++.|+.+ +|++++|+||+++|++.......          .+..++.+|+|+|+.+.||+++....++|+
T Consensus       184 aa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~dvA~~v~~l~s~~~~~~~g~  253 (262)
T 3rkr_A          184 WGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAK----------KSALGAIEPDDIADVVALLATQADQSFISE  253 (262)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------CCCHHHHHHHHHHHHTCCTTCCEEE
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccccc----------cccccCCCHHHHHHHHHHHhcCccccccCc
Confidence            9999999999999988 99999999999999987543221          234567899999999999999999999999


Q ss_pred             EEEeCCCc
Q 025273          244 TLVVAGGM  251 (255)
Q Consensus       244 ~i~~dgG~  251 (255)
                      .+..+.|.
T Consensus       254 ~~i~p~~~  261 (262)
T 3rkr_A          254 VLVRPTLK  261 (262)
T ss_dssp             EEEECCCC
T ss_pred             EEeccccC
Confidence            99888764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.8e-46  Score=315.28  Aligned_cols=233  Identities=22%  Similarity=0.338  Sum_probs=208.8

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-------HHHHHHHHHhcCCeEEEEEecCCCHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-------VDEAVVKLKARGIEVIGVVCHVSNGQQRKNL   79 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   79 (255)
                      +.+++||++|||||++|||++++++|+++|++|++++|+.++       ++...+++...+.++.++++|++++++++++
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            456899999999999999999999999999999999999874       5667777777788999999999999999999


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCC--CC
Q 025273           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQP--QS  155 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~--~~  155 (255)
                      ++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++  .++||++||..+..+  .+
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~  198 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAIS-LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFK  198 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTS
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCC
Confidence            9999999999999999999876 577889999999999999999999999999999973  579999999998877  78


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCc-ccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGF-VPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      ....|++||++++.|+++++.|+..+|+||+|+||+ ++|++...+..          ..+.+++.+|+|+|+.++||++
T Consensus       199 ~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~~~~~----------~~~~~r~~~pedvA~~v~~L~s  268 (346)
T 3kvo_A          199 QHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMDMLGG----------PGIESQCRKVDIIADAAYSIFQ  268 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHHHHCC------------CGGGCBCTHHHHHHHHHHHT
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHHhhcc----------ccccccCCCHHHHHHHHHHHHh
Confidence            899999999999999999999998889999999995 99987643322          2246678899999999999999


Q ss_pred             CCCCCccccEEEeCCCcc
Q 025273          235 DDASYITGETLVVAGGMP  252 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~  252 (255)
                      + .++++|+++ +|||+.
T Consensus       269 ~-~~~itG~~i-vdgg~~  284 (346)
T 3kvo_A          269 K-PKSFTGNFV-IDENIL  284 (346)
T ss_dssp             S-CTTCCSCEE-EHHHHH
T ss_pred             c-CCCCCceEE-ECCcEe
Confidence            9 889999998 999853

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=9.6e-46  Score=303.10  Aligned_cols=234  Identities=30%  Similarity=0.423  Sum_probs=207.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.           +.++.++++|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999998764           3467889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|+  +.++||++||..+..+.++...|++||+
T Consensus        73 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (264)
T 2dtx_A           73 GSISVLVNNAGIES-YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKH  151 (264)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHH
Confidence            99999999999865 46778889999999999999999999999999986  3579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC-----Ch----hHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS-----ND----GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      +++.|+++++.|+.+.|++|+|+||+++|++......     .+    ..........+.+++++|+|+|+.+++++++.
T Consensus       152 a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  231 (264)
T 2dtx_A          152 AVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE  231 (264)
T ss_dssp             HHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999766999999999999998654320     12    22333444567888999999999999999988


Q ss_pred             CCCccccEEEeCCCccc
Q 025273          237 ASYITGETLVVAGGMPS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      .++++|+.+.+|||+..
T Consensus       232 ~~~~tG~~i~vdGG~~~  248 (264)
T 2dtx_A          232 ASFITGTCLYVDGGLSI  248 (264)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hcCCCCcEEEECCCccc
Confidence            88999999999999764

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=3.8e-45  Score=296.75  Aligned_cols=237  Identities=25%  Similarity=0.376  Sum_probs=207.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|++++++++++++++.+.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999998888888887767789999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      |++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+ .+++||++||..+..+.++...|+++|+|
T Consensus        83 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  161 (247)
T 2jah_A           83 GGLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFG  161 (247)
T ss_dssp             SCCSEEEECCCCCC-CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCcHHHHHHHH
Confidence            99999999999865 56788899999999999999999999999999985 34899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCC--CCHHHHHHHHHHhcCCCCCCcccc
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRL--GTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++.|+++++.|+.+ ||++|+|+||+++|++...... ........ ..+ +++  ++|+|+++.+.|++++...+++++
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~-~~~-~~~~~~~pedvA~~v~~l~s~~~~~~~~~  238 (247)
T 2jah_A          162 VNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TATKEMYE-QRI-SQIRKLQAQDIAEAVRYAVTAPHHATVHE  238 (247)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HHHHHHHH-HHT-TTSCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             HHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hhhHHHHH-hcc-cccCCCCHHHHHHHHHHHhCCCccCccce
Confidence            99999999999988 9999999999999998765422 22211121 223 455  899999999999999888888777


Q ss_pred             EEEeCC
Q 025273          244 TLVVAG  249 (255)
Q Consensus       244 ~i~~dg  249 (255)
                      . .+++
T Consensus       239 i-~i~~  243 (247)
T 2jah_A          239 I-FIRP  243 (247)
T ss_dssp             E-EEEE
T ss_pred             E-EecC
Confidence            4 5543

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=8.1e-46  Score=302.75  Aligned_cols=239  Identities=21%  Similarity=0.286  Sum_probs=209.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHH---cCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGL---EGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      ++++|++|||||++|||++++++|++   +|++|++++|+.+.++.+.+++...  +.++.++++|++++++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            57799999999999999999999999   8999999999998888888887654  568999999999999999999999


Q ss_pred             HH--HhCCCC--EEEEcCCCCCC-CCCccC-CCHHHHHHHHHHHhHHHHHHHHHHhhcccC----CCeEEEEcccCccCC
Q 025273           84 IE--KFGKID--VVVSNAAANPS-VDSILQ-TKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQP  153 (255)
Q Consensus        84 ~~--~~g~~d--~lv~~ag~~~~-~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~iv~iss~~~~~~  153 (255)
                      .+  .+|++|  +||||||+... ..++.+ .+.++|++.+++|+.|+++++++++|.|++    .++||++||..++.+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence            88  668899  99999998642 245667 789999999999999999999999999964    378999999999999


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc---CChhHHHHHHhhcccCCCCCHHHHHHHHH
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT---SNDGVRQTIEQNTLLNRLGTTRDMAAAAA  230 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  230 (255)
                      .++...|++||+|++.|+++++.|+.+ ||||+|+||+++|++.....   ..+.....+....+.+++++|+|+|+.++
T Consensus       163 ~~~~~~Y~asKaa~~~~~~~la~e~~~-i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~  241 (259)
T 1oaa_A          163 YKGWGLYCAGKAARDMLYQVLAAEEPS-VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLL  241 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTT-EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhhCCC-ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHH
Confidence            999999999999999999999999975 99999999999999875432   12333344445567788999999999999


Q ss_pred             HhcCCCCCCccccEEEeCC
Q 025273          231 FLASDDASYITGETLVVAG  249 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dg  249 (255)
                      +++++ .++++|+++.+||
T Consensus       242 ~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          242 GLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHH-CCSCTTEEEETTC
T ss_pred             HHHhh-ccccCCcEEeccC
Confidence            99985 6889999999986

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=2.1e-45  Score=296.91  Aligned_cols=232  Identities=32%  Similarity=0.504  Sum_probs=204.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||++|||++++++|+++|++|++++|+.+.   ..+++   +  +.++++|+++ ++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id   72 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGGLH   72 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999999765   23333   2  6778999999 999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCC--CCChhhHhhHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQ--SSMAMYGVTKTAL  167 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~--~~~~~y~~sK~a~  167 (255)
                      ++|||||... ..++.+.+.++|++.+++|+.+++++++.++|.|+  +.++||++||..++.+.  ++...|++||+++
T Consensus        73 ~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~  151 (239)
T 2ekp_A           73 VLVHAAAVNV-RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL  151 (239)
T ss_dssp             EEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence            9999999865 56778899999999999999999999999999986  46899999999998877  8899999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.|+++++.|+.+ +|++|+|+||+++|++.......++.........+.+++.+|+|+|+.+.+++++..++++|+.+.
T Consensus       152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~  231 (239)
T 2ekp_A          152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVA  231 (239)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEE
Confidence            9999999999988 999999999999999876543233333444455678889999999999999999888899999999


Q ss_pred             eCCCccc
Q 025273          247 VAGGMPS  253 (255)
Q Consensus       247 ~dgG~~~  253 (255)
                      +|||+..
T Consensus       232 vdgG~~~  238 (239)
T 2ekp_A          232 VDGGFLA  238 (239)
T ss_dssp             ESTTTTT
T ss_pred             ECCCccc
Confidence            9999754

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=7.5e-46  Score=303.95  Aligned_cols=239  Identities=21%  Similarity=0.249  Sum_probs=206.2

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ..++.+|++|||||++|||++++++|+++|++|++++|+.+.++..      ...++.++++|+++.++++++++++.+.
T Consensus        11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (266)
T 3p19_A           11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL------NLPNTLCAQVDVTDKYTFDTAITRAEKI   84 (266)
T ss_dssp             ----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT------CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh------hcCCceEEEecCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999997665432      1337888999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+  +.++||++||..++.+.++...|++||
T Consensus        85 ~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  163 (266)
T 3p19_A           85 YGPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTK  163 (266)
T ss_dssp             HCSEEEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHH
Confidence            999999999999876 57788899999999999999999999999999986  568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +|++.|+++++.|+.+ ||++|+|+||+++|++..................+.+++++|+|+|+.++|+++.+...+.++
T Consensus       164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~~~~~  243 (266)
T 3p19_A          164 FAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIRE  243 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCcccee
Confidence            9999999999999988 999999999999999987654322222222223478899999999999999999998888888


Q ss_pred             EEEeCCCcc
Q 025273          244 TLVVAGGMP  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      .+....+..
T Consensus       244 i~i~p~~~~  252 (266)
T 3p19_A          244 IALAPTKQQ  252 (266)
T ss_dssp             EEEEETTCC
T ss_pred             eEEecCCCC
Confidence            877665543

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=5.7e-45  Score=296.01  Aligned_cols=240  Identities=29%  Similarity=0.438  Sum_probs=213.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHH-HhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++ ...+.++.++++|+++.++++++++++.+.++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999988888777776 3345689999999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCC---ccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           91 DVVVSNAAANPSVDS---ILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        91 d~lv~~ag~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|||||... ..+   +.+.+.++|++.+++|+.+++++++.+++.|+  +.++||++||..+..+.++...|+++|+
T Consensus        82 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (250)
T 2cfc_A           82 DVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKG  160 (250)
T ss_dssp             CEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHH
Confidence            99999999864 334   77889999999999999999999999999985  4579999999999988899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.|+++++.|+.+ +|+++.|+||+++|++.......+..........+.+++++|+|+++.+.+++++...+++|+.
T Consensus       161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  240 (250)
T 2cfc_A          161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAA  240 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCE
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCCE
Confidence            999999999999987 9999999999999998764222333444445556788899999999999999998888999999


Q ss_pred             EEeCCCcc
Q 025273          245 LVVAGGMP  252 (255)
Q Consensus       245 i~~dgG~~  252 (255)
                      +.+|||..
T Consensus       241 ~~v~gG~~  248 (250)
T 2cfc_A          241 LVMDGAYT  248 (250)
T ss_dssp             EEESTTGG
T ss_pred             EEECCcee
Confidence            99999975

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=2.2e-45  Score=301.20  Aligned_cols=245  Identities=31%  Similarity=0.479  Sum_probs=191.1

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++++|++|||||+||||++++++|+++|++|++++|+.+.++...+++...+.++.++++|+++.++++++++++.+.
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888888888777778999999999999999999999999


Q ss_pred             h-CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           87 F-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        87 ~-g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      + +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|+  +.++||++||..+..+.++...|+++
T Consensus        89 ~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  167 (266)
T 1xq1_A           89 FGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT  167 (266)
T ss_dssp             HTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred             hCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHH
Confidence            9 89999999999865 46677889999999999999999999999999985  46899999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |++++.|+++++.++.+ +|++++|+||+++|++..... .+..........+.+++++|+|+++.+.+++++...+++|
T Consensus       168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  246 (266)
T 1xq1_A          168 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITG  246 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence            99999999999999987 999999999999999876442 1222222333456778899999999999999988888999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.+.+|||+..
T Consensus       247 ~~~~v~gG~~~  257 (266)
T 1xq1_A          247 QTICVDGGLTV  257 (266)
T ss_dssp             CEEECCCCEEE
T ss_pred             cEEEEcCCccc
Confidence            99999999764

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.4e-45  Score=303.23  Aligned_cols=231  Identities=23%  Similarity=0.300  Sum_probs=188.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++   +.++.++++|++++++++++++++.+.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  100 (272)
T 4dyv_A           24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKF  100 (272)
T ss_dssp             ----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999999998888777666   3678899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC----CCeEEEEcccCccCCCCCChhhHhh
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      |++|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|.|++    +++||++||..+..+.++...|++|
T Consensus       101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  180 (272)
T 4dyv_A          101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTAT  180 (272)
T ss_dssp             SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHH
Confidence            999999999998765578889999999999999999999999999999863    5799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|+++|+++++.|+.+ +|++|+|+||+++|++.........   ......+.+++++|+|+|+.++||++.+.....+
T Consensus       181 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~  257 (272)
T 4dyv_A          181 KHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVP---QADLSIKVEPVMDVAHVASAVVYMASLPLDANVQ  257 (272)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------CHHHHHHHHHHHHHSCTTSCCC
T ss_pred             HHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccch---hhhhcccccCCCCHHHHHHHHHHHhCCCCcCccc
Confidence            99999999999999988 9999999999999998765533211   1122346677899999999999999977665444


Q ss_pred             cE
Q 025273          243 ET  244 (255)
Q Consensus       243 ~~  244 (255)
                      +.
T Consensus       258 ~i  259 (272)
T 4dyv_A          258 FM  259 (272)
T ss_dssp             EE
T ss_pred             eE
Confidence            43

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=6.5e-45  Score=296.35  Aligned_cols=243  Identities=28%  Similarity=0.412  Sum_probs=213.1

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeE-EEEEecCCCHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV-IGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +++++++|++|||||+||||++++++|+++|++|++++|+.+.++...+++   +.++ .++++|+++.++++++++++.
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999988877766665   3466 889999999999999999998


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCC--hhh
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSM--AMY  160 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~--~~y  160 (255)
                      + ++++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++|.|+  +.++||++||..+..+.+..  ..|
T Consensus        82 ~-~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  159 (254)
T 2wsb_A           82 A-VAPVSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSY  159 (254)
T ss_dssp             H-HSCCCEEEECCCCCC-CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHH
T ss_pred             h-hCCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHH
Confidence            8 899999999999865 46677889999999999999999999999999885  46899999999988777777  899


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +++|++++.++++++.++.+ +|+++.|+||+++|++.......+..........+.+++.+|+|+++.+.+++++...+
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  239 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASY  239 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccc
Confidence            99999999999999999987 99999999999999987654433344444455567788999999999999999988888


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+.+.+|||+..
T Consensus       240 ~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          240 VTGAILAVDGGYTV  253 (254)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCCEEEECCCEec
Confidence            99999999999753

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1e-46  Score=318.10  Aligned_cols=243  Identities=19%  Similarity=0.203  Sum_probs=207.0

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEeCCch---------hHHHHHHHHHh---cCCeEEEEEecCCCH--H
Q 025273           11 QGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQK---------NVDEAVVKLKA---RGIEVIGVVCHVSNG--Q   74 (255)
Q Consensus        11 ~~k~vlItGa~~--giG~~~a~~l~~~G~~V~~~~r~~~---------~~~~~~~~~~~---~~~~~~~~~~Dv~~~--~   74 (255)
                      ++|++|||||++  |||++++++|+++|++|++++|++.         .++...+....   ....+.+++||+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            379999999985  9999999999999999998877652         22221111111   123578899999988  8


Q ss_pred             ------------------HHHHHHHHHHHHhCCCCEEEEcCCCC-CCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhc
Q 025273           75 ------------------QRKNLINQTIEKFGKIDVVVSNAAAN-PSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH  135 (255)
Q Consensus        75 ------------------~v~~~~~~~~~~~g~~d~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  135 (255)
                                        +++++++++.+.+|++|+||||||+. ....++.+.+.++|++++++|+.|++.++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999975 23578889999999999999999999999999999


Q ss_pred             ccCCCeEEEEcccCccCCCCCCh-hhHhhHHHHHHHHHHHHHHhCC--CeeEEEEeCCcccCCccccccCCh--------
Q 025273          136 LQKGSSVVLISSIAGYQPQSSMA-MYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAEYITSND--------  204 (255)
Q Consensus       136 ~~~~~~iv~iss~~~~~~~~~~~-~y~~sK~a~~~l~~~la~e~~~--~v~v~~v~pg~v~t~~~~~~~~~~--------  204 (255)
                      |++.++||++||..+..+.+... .|++||+|+.+|+++|+.|+.+  +|+||+|+||+++|+|........        
T Consensus       161 m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  240 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN  240 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-----------
T ss_pred             HhhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccccccc
Confidence            98779999999999999998885 9999999999999999999975  999999999999999987653210        


Q ss_pred             -----------------------------------hHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCC
Q 025273          205 -----------------------------------GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       205 -----------------------------------~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                                                         ..........|.+++++|+|+|+.++||+++..+++||++|.+||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~vdG  320 (329)
T 3lt0_A          241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDN  320 (329)
T ss_dssp             -------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEEEcC
Confidence                                               113445667789999999999999999999999999999999999


Q ss_pred             Cccc
Q 025273          250 GMPS  253 (255)
Q Consensus       250 G~~~  253 (255)
                      |+..
T Consensus       321 G~~~  324 (329)
T 3lt0_A          321 GLNI  324 (329)
T ss_dssp             TGGG
T ss_pred             CeeE
Confidence            9875

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.1e-45  Score=300.04  Aligned_cols=232  Identities=28%  Similarity=0.484  Sum_probs=197.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++.+           ..+++|+++.++++++++++.+.+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----------~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----------FGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----------EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----------cCeeccCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999987654321           138899999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|+  +.++||++||..+..+.+....|+++|+
T Consensus        80 g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (247)
T 1uzm_A           80 GPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA  158 (247)
T ss_dssp             SSCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHH
Confidence            99999999999875 46778899999999999999999999999999986  3579999999999988889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.|+++++.|+.+ +|++|+|+||+++|++....  .+..........+.+++.+|+|+++.+.|++++...+++|+.
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~  236 (247)
T 1uzm_A          159 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAV  236 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCE
Confidence            999999999999988 99999999999999987543  223333344456778899999999999999998888999999


Q ss_pred             EEeCCCccc
Q 025273          245 LVVAGGMPS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +.+|||+..
T Consensus       237 i~vdgG~~~  245 (247)
T 1uzm_A          237 IPVDGGMGM  245 (247)
T ss_dssp             EEESTTTTC
T ss_pred             EEECCCccc
Confidence            999999754

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=4.8e-46  Score=302.97  Aligned_cols=233  Identities=29%  Similarity=0.493  Sum_probs=196.2

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.++           .+.++++|++++++++++++++.+.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEET   84 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHHH
Confidence            35578999999999999999999999999999999999876432           2677899999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|+  +.++||++||..+..+.+....|+++|
T Consensus        85 ~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  163 (253)
T 2nm0_A           85 HGPVEVLIANAGVTK-DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASK  163 (253)
T ss_dssp             TCSCSEEEEECSCCT-TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence            999999999999865 46677888999999999999999999999999985  568999999999988877888999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.|+++++.|+.+ +|++|+|+||+++|++......  ..........+.+++.+|+|+|+.+.+++++...+++|+
T Consensus       164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~  241 (253)
T 2nm0_A          164 AGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD--EQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGA  241 (253)
T ss_dssp             HHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCc
Confidence            9999999999999988 9999999999999998754321  122233445577889999999999999999988899999


Q ss_pred             EEEeCCCccc
Q 025273          244 TLVVAGGMPS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      .+.+|||...
T Consensus       242 ~i~vdGG~~~  251 (253)
T 2nm0_A          242 VIPVDGGLGM  251 (253)
T ss_dssp             EEEESTTTTC
T ss_pred             EEEECCcccc
Confidence            9999999753

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=3.5e-45  Score=296.84  Aligned_cols=230  Identities=24%  Similarity=0.377  Sum_probs=206.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecC--CCHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHV--SNGQQRKNLINQTI   84 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv--~~~~~v~~~~~~~~   84 (255)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+ .+..++.+|+  ++.++++++++++.
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            35889999999999999999999999999999999999999999888887764 5667777777  99999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHh
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      +.+|++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  169 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGV  169 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHH
Confidence            99999999999999876567888999999999999999999999999999986  4579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC--CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          163 TKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~--~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +|+|++.|+++++.|+.+  +|++|+|+||+++|++........          ...+..+|+|+++.++||+++..+++
T Consensus       170 sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~----------~~~~~~~p~dva~~~~~l~s~~~~~i  239 (247)
T 3i1j_A          170 SKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE----------NPLNNPAPEDIMPVYLYLMGPDSTGI  239 (247)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTS----------CGGGSCCGGGGTHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccccc----------CccCCCCHHHHHHHHHHHhCchhccc
Confidence            999999999999999953  899999999999999875443221          12345789999999999999999999


Q ss_pred             cccEEEe
Q 025273          241 TGETLVV  247 (255)
Q Consensus       241 ~G~~i~~  247 (255)
                      ||++|.+
T Consensus       240 tG~~i~~  246 (247)
T 3i1j_A          240 NGQALNA  246 (247)
T ss_dssp             CSCEEEC
T ss_pred             cCeeecC
Confidence            9999976

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=3e-45  Score=297.65  Aligned_cols=237  Identities=34%  Similarity=0.513  Sum_probs=195.4

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   ..++.++.+|+++.+++++++++    
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~----   81 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL---KDNYTIEVCNLANKEECSNLISK----   81 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHT----
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHh----
Confidence            35688999999999999999999999999999999999998888776665   35788999999999998887764    


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++|.|+  +.++||++||..++.+.++...|++||
T Consensus        82 ~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  160 (249)
T 3f9i_A           82 TSNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASK  160 (249)
T ss_dssp             CSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHH
Confidence            368999999999876 45667788899999999999999999999999985  567999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +|++.|+++++.|+.+ +|++++|+||+++|++....  .+..........+.+++.+|+|+++.+.+++++...+++|+
T Consensus       161 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~  238 (249)
T 3f9i_A          161 AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQ  238 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C--CHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCc
Confidence            9999999999999987 99999999999999987654  34445556677788999999999999999999998999999


Q ss_pred             EEEeCCCccc
Q 025273          244 TLVVAGGMPS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      ++++|||+..
T Consensus       239 ~~~vdgG~~~  248 (249)
T 3f9i_A          239 TLHVNGGMLM  248 (249)
T ss_dssp             EEEESTTSSC
T ss_pred             EEEECCCEee
Confidence            9999999863

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.4e-45  Score=294.96  Aligned_cols=219  Identities=24%  Similarity=0.354  Sum_probs=195.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+                    +|++++++++++++++    
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~----   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI----   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH----
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh----
Confidence            4578999999999999999999999999999999999864                    7999999999888754    


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +++|++|||||......++.+.+.++|++.+++|+.++++++++++|+|+++++||++||..+..+.++...|+++|+++
T Consensus        58 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~  137 (223)
T 3uce_A           58 GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAI  137 (223)
T ss_dssp             CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHH
Confidence            89999999999875567889999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC--hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN--DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      +.|+++++.|+.+ ||+|+|+||+++|++.......  ...........+.+++.+|+|+|+.++++++  ..+++|+++
T Consensus       138 ~~~~~~la~e~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~tG~~i  214 (223)
T 3uce_A          138 EATTKVLAKELAP-IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYMTGTVI  214 (223)
T ss_dssp             HHHHHHHHHHHTT-SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTCCSCEE
T ss_pred             HHHHHHHHHhhcC-cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCCCCcEE
Confidence            9999999999988 9999999999999987655332  2233445667789999999999999999997  478999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||...
T Consensus       215 ~vdgG~~~  222 (223)
T 3uce_A          215 DVDGGALL  222 (223)
T ss_dssp             EESTTGGG
T ss_pred             EecCCeec
Confidence            99999864

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.4e-46  Score=300.48  Aligned_cols=235  Identities=29%  Similarity=0.442  Sum_probs=201.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++.+. ++    .++.++++|+++.+++++    +.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~----~~~~~   72 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQ----FANEV   72 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHH----HHHHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHH----HHHHh
Confidence            3478999999999999999999999999999999999976655433 22    278889999999999884    44567


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCC-CChhhHhhH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQS-SMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~-~~~~y~~sK  164 (255)
                      +++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|+  +.++||++||..+..+.+ +...|+++|
T Consensus        73 ~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK  151 (246)
T 2ag5_A           73 ERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK  151 (246)
T ss_dssp             SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred             CCCCEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHH
Confidence            89999999999865 46778889999999999999999999999999985  468999999999888777 889999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC----ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      ++++.|+++++.|+.+ +|++|+|+||+++|++......    ............+.+++++|+|+|+.+.|++++...+
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~  231 (246)
T 2ag5_A          152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAY  231 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccC
Confidence            9999999999999988 9999999999999998654211    1222333444567888999999999999999998899


Q ss_pred             ccccEEEeCCCcc
Q 025273          240 ITGETLVVAGGMP  252 (255)
Q Consensus       240 ~~G~~i~~dgG~~  252 (255)
                      ++|+.+.+|||+.
T Consensus       232 ~tG~~i~vdgG~~  244 (246)
T 2ag5_A          232 VTGNPVIIDGGWS  244 (246)
T ss_dssp             CCSCEEEECTTGG
T ss_pred             CCCCEEEECCCcc
Confidence            9999999999975

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=2.1e-44  Score=293.41  Aligned_cols=244  Identities=31%  Similarity=0.473  Sum_probs=217.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.++
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999999999888888888877677899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||... ..++ +.+.++|++.+++|+.+++++++.++|.|+  +.++||++||..++.+.++...|+++|++
T Consensus        88 ~~d~vi~~Ag~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  165 (255)
T 1fmc_A           88 KVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAA  165 (255)
T ss_dssp             SCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHH
Confidence            9999999999865 3444 678999999999999999999999999985  45799999999999988999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.+++.++.++.+ +|+++.++||++.|++..... .+..........+.+++++|+|+++.+.+++++...+++|+++
T Consensus       166 ~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  244 (255)
T 1fmc_A          166 ASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQIL  244 (255)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc-ChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcEE
Confidence            99999999999977 999999999999999865432 2333444555668888999999999999999887788999999


Q ss_pred             EeCCCcccCC
Q 025273          246 VVAGGMPSRL  255 (255)
Q Consensus       246 ~~dgG~~~~~  255 (255)
                      ++|||...++
T Consensus       245 ~v~gg~~~s~  254 (255)
T 1fmc_A          245 TVSGGGVQEL  254 (255)
T ss_dssp             EESTTSCCCC
T ss_pred             EECCceeccC
Confidence            9999998764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.4e-44  Score=293.90  Aligned_cols=242  Identities=27%  Similarity=0.418  Sum_probs=211.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+.++...+++... .++.++++|+++.++++++++++.+.++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            467999999999999999999999999999999999988777766665432 5789999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--C-CeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--G-SSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~-~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.+++.|++  . ++||++||..++.+.++...|+++|+
T Consensus        82 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (251)
T 1zk4_A           82 PVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             SCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHH
Confidence            9999999999865 467788899999999999999999999999999863  2 69999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhC--C-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          166 ALLGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       166 a~~~l~~~la~e~~--~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      +++.++++++.|+.  + +|+++.|+||+++|++..... ............+.+++.+|+|+++.+.+++++...+++|
T Consensus       161 a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  239 (251)
T 1zk4_A          161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-GAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATG  239 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-THHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC-chhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccC
Confidence            99999999999986  6 999999999999999876532 1222222233456778899999999999999988888999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.+.+|||+..
T Consensus       240 ~~~~v~gG~~~  250 (251)
T 1zk4_A          240 SEFVVDGGYTA  250 (251)
T ss_dssp             CEEEESTTGGG
T ss_pred             cEEEECCCccC
Confidence            99999999864

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-45  Score=303.73  Aligned_cols=237  Identities=25%  Similarity=0.329  Sum_probs=197.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+.++...+++... +..+.+++||+++.++++++++++.+.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999988888887655 334589999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC----CCeEEEEcccCccCCCCCChhhHh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      +|++|+||||||......++.+.+.++|++++++|+.|+++++++++|.|++    +++||++||..+..+.++...|++
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a  188 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTA  188 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHH
Confidence            9999999999998765578899999999999999999999999999999863    579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC-c
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY-I  240 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~-~  240 (255)
                      ||+|+++|+++++.|+.+ +|++|+|+||+++|++.........   ......+.+++++|+|+|++++||++.+... +
T Consensus       189 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i  265 (281)
T 4dry_A          189 TKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVL---QANGEVAAEPTIPIEHIAEAVVYMASLPLSANV  265 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEE---CTTSCEEECCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhh---hhhhcccccCCCCHHHHHHHHHHHhCCCccCcc
Confidence            999999999999999988 9999999999999998765432110   1112345677889999999999999976553 4


Q ss_pred             cccEEEe
Q 025273          241 TGETLVV  247 (255)
Q Consensus       241 ~G~~i~~  247 (255)
                      ++..+..
T Consensus       266 ~~~~i~p  272 (281)
T 4dry_A          266 LTMTVMA  272 (281)
T ss_dssp             EEEEEEE
T ss_pred             ccEEEEe
Confidence            4444443

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=2.1e-44  Score=292.29  Aligned_cols=241  Identities=30%  Similarity=0.514  Sum_probs=213.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++.. .+.++.++++|+++.++++++++++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999998888877777755 3668999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++|||||... ..++.+.+.++|++.+++|+.+++++++.+++.|+  +.++||++||..+..+.++...|+++|
T Consensus        83 ~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  161 (248)
T 2pnf_A           83 VDGIDILVNNAGITR-DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTK  161 (248)
T ss_dssp             SSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHH
Confidence            999999999999865 46677889999999999999999999999999885  457999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.+++.++.|+.+ +|+++.++||+++|++....  ............+.+++.+|+|+++.+.+++++...+++|+
T Consensus       162 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  239 (248)
T 2pnf_A          162 AGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGE  239 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc--cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCc
Confidence            9999999999999987 99999999999999987643  22333334444577888999999999999998877889999


Q ss_pred             EEEeCCCc
Q 025273          244 TLVVAGGM  251 (255)
Q Consensus       244 ~i~~dgG~  251 (255)
                      ++.+|||+
T Consensus       240 ~~~v~gg~  247 (248)
T 2pnf_A          240 VIHVNGGM  247 (248)
T ss_dssp             EEEESTTC
T ss_pred             EEEeCCCc
Confidence            99999996

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-44  Score=291.46  Aligned_cols=224  Identities=18%  Similarity=0.194  Sum_probs=189.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.++...+++.   .++.++++|++++++++++++++.+.+|++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999999998888777773   368999999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      |+||||||... ..++.+.+.++|++.+++|+.|++.++++++|+|+ ++++||++||..+..+.+....|++||+|+++
T Consensus        79 d~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~  157 (235)
T 3l6e_A           79 ELVLHCAGTGE-FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRG  157 (235)
T ss_dssp             SEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHHHH
T ss_pred             cEEEECCCCCC-CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHHHH
Confidence            99999999865 56788899999999999999999999999999996 45699999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC-CCCCccccEEEe
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD-DASYITGETLVV  247 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~-~~~~~~G~~i~~  247 (255)
                      |+++++.|+.+ +||+|+|+||+++|++......           .+..++.+|+|+|+.++++++. ...+++|-.+..
T Consensus       158 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~~~  226 (235)
T 3l6e_A          158 FLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFIGR  226 (235)
T ss_dssp             HHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------CBCHHHHHHHHHHHTCCCSSEEEEEEEEEE
T ss_pred             HHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEEec
Confidence            99999999988 9999999999999998754322           1234688999999999999984 455677766554


Q ss_pred             CC
Q 025273          248 AG  249 (255)
Q Consensus       248 dg  249 (255)
                      ..
T Consensus       227 ~~  228 (235)
T 3l6e_A          227 NE  228 (235)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.4e-44  Score=289.92  Aligned_cols=231  Identities=22%  Similarity=0.268  Sum_probs=207.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.++...+++. ..+.++.+++||++++++++++++++.+.+|+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999999999888888876 44779999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      +|++|||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+ .++++|++||..+..+.+....|+++|++++
T Consensus        81 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~  159 (235)
T 3l77_A           81 VDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAAR  159 (235)
T ss_dssp             CSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCcccc-ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHH
Confidence            999999999876 57788999999999999999999999999999985 5689999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeC
Q 025273          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA  248 (255)
Q Consensus       169 ~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      +|+++++.+ .++|++|+|+||+++|++.........          ..++.+|+|+|+.+.|+++++..+++|+.+..|
T Consensus       160 ~~~~~l~~~-~~~i~v~~v~PG~v~T~~~~~~~~~~~----------~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~  228 (235)
T 3l77_A          160 ALVRTFQIE-NPDVRFFELRPGAVDTYFGGSKPGKPK----------EKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRS  228 (235)
T ss_dssp             HHHHHHHHH-CTTSEEEEEEECSBSSSTTTCCSCCCG----------GGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECC
T ss_pred             HHHHHHhhc-CCCeEEEEEeCCccccccccccCCccc----------ccCCCCHHHHHHHHHHHHcCCCCCccceEEEee
Confidence            999999555 348999999999999998876544322          125779999999999999999999999999999


Q ss_pred             CCccc
Q 025273          249 GGMPS  253 (255)
Q Consensus       249 gG~~~  253 (255)
                      +|...
T Consensus       229 ~~~~~  233 (235)
T 3l77_A          229 VYQRP  233 (235)
T ss_dssp             TTSCC
T ss_pred             cccCC
Confidence            99865

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=2e-44  Score=298.51  Aligned_cols=242  Identities=31%  Similarity=0.487  Sum_probs=213.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.+
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            35778999999999999999999999999999999999888888888887667789999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++++++.+++.|+  +.++||++||..+..+.++...|+++|+
T Consensus       120 ~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~  198 (285)
T 2c07_A          120 KNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKA  198 (285)
T ss_dssp             SCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHH
Confidence            99999999999875 56778889999999999999999999999999885  4579999999998888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.|+++++.|+.+ +|+++.|+||+++|++....  .+..........+.+++.+|+|+|+.+++++++...+++|+.
T Consensus       199 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~  276 (285)
T 2c07_A          199 GVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRV  276 (285)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc--CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCE
Confidence            999999999999987 99999999999999987543  233333444456778899999999999999998888899999


Q ss_pred             EEeCCCcc
Q 025273          245 LVVAGGMP  252 (255)
Q Consensus       245 i~~dgG~~  252 (255)
                      +.+|||+.
T Consensus       277 i~v~gG~~  284 (285)
T 2c07_A          277 FVIDGGLS  284 (285)
T ss_dssp             EEESTTSC
T ss_pred             EEeCCCcc
Confidence            99999975

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=7e-45  Score=296.66  Aligned_cols=245  Identities=31%  Similarity=0.472  Sum_probs=216.5

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +.++++|++|||||+||||++++++|+++|++|++++|+ .+.++.+.+++...+.++.++++|+++.++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            2 FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999 8888888888877677899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-C---C---CeEEEEcccCccC-CCCCC
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-K---G---SSVVLISSIAGYQ-PQSSM  157 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~---~---~~iv~iss~~~~~-~~~~~  157 (255)
                      .++++|++|||||......++.+.+.++|++.+++|+.+++.++++++|.|+ .   .   ++||++||..+.. +.++.
T Consensus        82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  161 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGA  161 (258)
T ss_dssp             HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTC
T ss_pred             HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCc
Confidence            9999999999999733356778889999999999999999999999999885 2   2   7999999998887 78889


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ..|+++|++++.+++.++.|+.+ +|+++.|+||+++|++....  .+..........+.+++.+|+|+++.+.+++++.
T Consensus       162 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  239 (258)
T 3afn_B          162 GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHL  239 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999987 99999999999999987543  2333444455567788999999999999999876


Q ss_pred             CC-CccccEEEeCCCccc
Q 025273          237 AS-YITGETLVVAGGMPS  253 (255)
Q Consensus       237 ~~-~~~G~~i~~dgG~~~  253 (255)
                      .. +++|+.+++|||...
T Consensus       240 ~~~~~~G~~~~v~gg~~~  257 (258)
T 3afn_B          240 ASGYITGQVLDINGGQYK  257 (258)
T ss_dssp             HHTTCCSEEEEESTTSSC
T ss_pred             hhccccCCEEeECCCccC
Confidence            66 789999999999853

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.9e-44  Score=300.88  Aligned_cols=246  Identities=26%  Similarity=0.395  Sum_probs=213.7

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ..++++|++|||||+||||++++++|+++|++|++++|+.+.++...+++... +.++.++++|+++.++++++++++.+
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999998888887777655 67899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhhHh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      .++++|++|||||... ..++.+.+.++|++.+++|+.+++++++.+++.|+   +.++||++||..+..+.++...|++
T Consensus       101 ~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  179 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  179 (302)
T ss_dssp             HTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHH
Confidence            9999999999999765 46777889999999999999999999999999885   3579999999999888899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCC-ccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTH-FAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +|++++.|+++++.++.+ +|++++|+||+++|+ +..................+.+++++|+|+++.+.+++++...++
T Consensus       180 sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~  259 (302)
T 1w6u_A          180 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWI  259 (302)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCccccc
Confidence            999999999999999987 999999999999997 444332222222334455677889999999999999999888889


Q ss_pred             cccEEEeCCCccc
Q 025273          241 TGETLVVAGGMPS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      +|+.+++|||...
T Consensus       260 ~G~~~~v~gg~~~  272 (302)
T 1w6u_A          260 NGAVIKFDGGEEV  272 (302)
T ss_dssp             CSCEEEESTTHHH
T ss_pred             CCCEEEECCCeee
Confidence            9999999999754

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=3.2e-44  Score=296.28  Aligned_cols=242  Identities=28%  Similarity=0.428  Sum_probs=212.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.++
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG  110 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999998887777777766577899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCcc-CCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCC--CCCChhhHhh
Q 025273           89 KIDVVVSNAAANPSVDSIL-QTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQP--QSSMAMYGVT  163 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~--~~~~~~y~~s  163 (255)
                      ++|++|||||......++. +.+.++|++.+++|+.+++.+++.+++.|+  +.++||++||..+..+  .++...|+++
T Consensus       111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~s  190 (279)
T 3ctm_A          111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTA  190 (279)
T ss_dssp             CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHH
T ss_pred             CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHH
Confidence            9999999999865325555 788899999999999999999999999985  4689999999998877  7788999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |++++.|+++++.|+.+ + ++++|+||+++|++....  .+.....+....+.+++.+|+|+|+.+.+++++...+++|
T Consensus       191 K~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG  267 (279)
T 3ctm_A          191 KAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA--SKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTTG  267 (279)
T ss_dssp             HHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC--CHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc--ChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999988 8 999999999999987432  2333334445567888999999999999999988889999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +++.+|||+..
T Consensus       268 ~~i~vdgG~~~  278 (279)
T 3ctm_A          268 SDVVIDGGYTC  278 (279)
T ss_dssp             CEEEESTTCCC
T ss_pred             CEEEECCCeec
Confidence            99999999764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=8.2e-45  Score=297.39  Aligned_cols=244  Identities=32%  Similarity=0.456  Sum_probs=206.3

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-------CeEEEEEecCCCHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-------IEVIGVVCHVSNGQQRKNL   79 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~   79 (255)
                      +.++++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++...+       .++.++++|+++.++++++
T Consensus         2 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (264)
T 2pd6_A            2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL   81 (264)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence            345789999999999999999999999999999999999888777666554433       5788999999999999999


Q ss_pred             HHHHHHHhCCC-CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCC
Q 025273           80 INQTIEKFGKI-DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQS  155 (255)
Q Consensus        80 ~~~~~~~~g~~-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~  155 (255)
                      ++++.+.++++ |++|||||... ..++.+.+.++|++.+++|+.+++++++++.+.|++   .++||++||..+..+.+
T Consensus        82 ~~~~~~~~g~i~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  160 (264)
T 2pd6_A           82 LEQVQACFSRPPSVVVSCAGITQ-DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV  160 (264)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT
T ss_pred             HHHHHHHhCCCCeEEEECCCcCC-CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC
Confidence            99999999998 99999999865 467788899999999999999999999999998863   57999999998888888


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      +...|+++|++++.|++.++.|+.+ +|++++|+||+++|++.....  +..........+.+++++|+|+++.+.++++
T Consensus       161 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  238 (264)
T 2pd6_A          161 GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP--QKVVDKITEMIPMGHLGDPEDVADVVAFLAS  238 (264)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGCTTCSCBCHHHHHHHHHHHHS
T ss_pred             CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcC--HHHHHHHHHhCCCCCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999987 999999999999999875432  1222233344567788999999999999998


Q ss_pred             CCCCCccccEEEeCCCccc
Q 025273          235 DDASYITGETLVVAGGMPS  253 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~  253 (255)
                      +...+++|+.+.+|||...
T Consensus       239 ~~~~~~~G~~~~v~gg~~~  257 (264)
T 2pd6_A          239 EDSGYITGTSVEVTGGLFM  257 (264)
T ss_dssp             GGGTTCCSCEEEESTTC--
T ss_pred             CcccCCCCCEEEECCCcee
Confidence            8778899999999999864

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.5e-44  Score=293.09  Aligned_cols=240  Identities=34%  Similarity=0.557  Sum_probs=193.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++|||||+||||++++++|+++|++|+++ .|+.+.++...+++...+.++.++++|+++.++++++++++.+.++
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999998 6777777777777776677899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||... ..++.+.+.++|++.+++|+.+++++++.+++.|+  +.++||++||..+..+.++...|+++|++
T Consensus        83 ~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  161 (247)
T 2hq1_A           83 RIDILVNNAGITR-DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAG  161 (247)
T ss_dssp             CCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHH
Confidence            9999999999865 45667788889999999999999999999999885  45799999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.++++++.|+.+ +|+++.++||+++|++....  .+..........+.+++.+|+|+++.+.+++++...+++|+.+
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  239 (247)
T 2hq1_A          162 LIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVI  239 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc--chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcEE
Confidence            99999999999987 99999999999999986543  2233333444567788999999999999999887788999999


Q ss_pred             EeCCCcc
Q 025273          246 VVAGGMP  252 (255)
Q Consensus       246 ~~dgG~~  252 (255)
                      ++|||+.
T Consensus       240 ~v~gG~~  246 (247)
T 2hq1_A          240 NIDGGLV  246 (247)
T ss_dssp             EESTTC-
T ss_pred             EeCCCcc
Confidence            9999975

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-44  Score=294.00  Aligned_cols=243  Identities=28%  Similarity=0.397  Sum_probs=211.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +++++|++|||||+||||++++++|+++|++|++++|+.+..+...+++... +.++.++++|+++.++++++++++.+.
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            3478999999999999999999999999999999999877666555555433 668999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCC-------C
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQS-------S  156 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~-------~  156 (255)
                      ++++|++|||||... ..++.+.+.++|++.+++|+.+++++++++++.|++   .++||++||..+..+.+       +
T Consensus        90 ~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  168 (265)
T 1h5q_A           90 LGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLT  168 (265)
T ss_dssp             SCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECS
T ss_pred             cCCCCEEEECCCcCC-CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccccc
Confidence            999999999999875 467788899999999999999999999999998852   47999999988766543       2


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      ...|+++|++++.|+++++.|+.+ +|+++.|+||+++|++....  .+..........+.+++.+|+|+++.+.+++++
T Consensus       169 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  246 (265)
T 1h5q_A          169 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSD  246 (265)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSG
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc--chhHHHHHHhcCcccCCCCHHHHHHHHHhhccC
Confidence            789999999999999999999987 99999999999999987654  233334444556778899999999999999998


Q ss_pred             CCCCccccEEEeCCCccc
Q 025273          236 DASYITGETLVVAGGMPS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      ...+++|+.+.+|||...
T Consensus       247 ~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          247 HATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             GGTTCCSCEEEECTTGGG
T ss_pred             chhcCcCcEEEecCCEeC
Confidence            888999999999999864

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=5.6e-45  Score=295.28  Aligned_cols=231  Identities=25%  Similarity=0.316  Sum_probs=199.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-e--CCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVS-S--RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +|++|||||++|||++++++|+++|++|+++ +  |+.+.++.+.+++  .+       +|+.+.++++++++++.+.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999 6  9988777766555  12       234477888889999999999


Q ss_pred             CCCEEEEcCCCCCCC--CCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           89 KIDVVVSNAAANPSV--DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++|+||||||+....  .++.+.+.++|++.+++|+.++++++++++|+|+  +.++||++||..+..+.+....|++||
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  151 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPAR  151 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHH
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHH
Confidence            999999999986521  6788899999999999999999999999999995  358999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcc---ccccCChhHHHHHHh-hcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFA---EYITSNDGVRQTIEQ-NTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      ++++.|+++++.|+.+ +|++|+|+||+++|++.   ...... +....... ..+.+++.+|+|+|+.++|++++..++
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~  230 (244)
T 1zmo_A          152 AATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN-PELRERVDRDVPLGRLGRPDEMGALITFLASRRAAP  230 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC-HHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGG
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch-HHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            9999999999999988 99999999999999987   443222 22222333 567889999999999999999998999


Q ss_pred             ccccEEEeCCCcc
Q 025273          240 ITGETLVVAGGMP  252 (255)
Q Consensus       240 ~~G~~i~~dgG~~  252 (255)
                      ++|+.+.+|||+.
T Consensus       231 ~tG~~i~vdgG~~  243 (244)
T 1zmo_A          231 IVGQFFAFTGGYL  243 (244)
T ss_dssp             GTTCEEEESTTCC
T ss_pred             ccCCEEEeCCCCC
Confidence            9999999999975

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=4.6e-44  Score=289.68  Aligned_cols=238  Identities=30%  Similarity=0.485  Sum_probs=211.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEE-EeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVV-SSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ||++|||||+||||++++++|+++|++|++ .+|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999998 4899888887777776667789999999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      |++|||||... ..++.+.+.++|++.+++|+.+++++++.+.++|+  +.++||++||..+..+.++...|+++|++++
T Consensus        81 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (244)
T 1edo_A           81 DVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCC-CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHH
Confidence            99999999875 46777889999999999999999999999999985  5679999999988888889999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhc-CCCCCCccccEEE
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA-SDDASYITGETLV  246 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~-s~~~~~~~G~~i~  246 (255)
                      .++++++.|+.+ +|+++.|+||+++|++....  .+..........+.+++.+|+|+++.+.+++ ++...+++|+.++
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~  237 (244)
T 1edo_A          160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFT  237 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEE
T ss_pred             HHHHHHHHHhhhcCCEEEEEeeCccccchhhhc--ChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEE
Confidence            999999999977 99999999999999987643  2233333444567788999999999999998 6667789999999


Q ss_pred             eCCCcc
Q 025273          247 VAGGMP  252 (255)
Q Consensus       247 ~dgG~~  252 (255)
                      +|||+.
T Consensus       238 v~gG~~  243 (244)
T 1edo_A          238 IDGGIA  243 (244)
T ss_dssp             ESTTTT
T ss_pred             eCCCcc
Confidence            999975

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-43  Score=296.53  Aligned_cols=248  Identities=28%  Similarity=0.415  Sum_probs=214.2

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-----cCCeEEEEEecCCCHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-----RGIEVIGVVCHVSNGQQRKN   78 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~   78 (255)
                      +.+...+++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++..     .+.++.++++|+++.+++++
T Consensus        10 ~~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~   89 (303)
T 1yxm_A           10 YLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNN   89 (303)
T ss_dssp             SBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHH
T ss_pred             ccCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHH
Confidence            3445568899999999999999999999999999999999999888888888765     35689999999999999999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcc-c-CCCeEEEEcccCccCCCCC
Q 025273           79 LINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-Q-KGSSVVLISSIAGYQPQSS  156 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~-~~~~iv~iss~~~~~~~~~  156 (255)
                      +++++.+.+|++|+||||||... ..++.+.+.++|++.+++|+.+++++++++++.+ + ..++||++||.. ..+.+.
T Consensus        90 ~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~  167 (303)
T 1yxm_A           90 LVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPL  167 (303)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCc
Confidence            99999999999999999999764 4667788999999999999999999999999954 3 468999999988 777888


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccc-cccC-ChhHHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAE-YITS-NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      ...|+++|++++.++++++.|+.+ +|++++|+||+++|++.. .... .+..........+.+++++|+|+|+.+++++
T Consensus       168 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~  247 (303)
T 1yxm_A          168 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLL  247 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHh
Confidence            999999999999999999999987 999999999999999532 1111 1222223334457788999999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 025273          234 SDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++...+++|+.+.+|||...
T Consensus       248 ~~~~~~~~G~~~~v~gG~~~  267 (303)
T 1yxm_A          248 SPAASFITGQSVDVDGGRSL  267 (303)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CcccccCCCcEEEECCCeec
Confidence            98888999999999999764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=4.6e-44  Score=289.71  Aligned_cols=238  Identities=28%  Similarity=0.385  Sum_probs=205.1

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++++++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++.    ...++++|+++.++++++++    .
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~   73 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----S   73 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----T
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----H
Confidence            346889999999999999999999999999999999999877666554432    34566999999999988876    4


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--C-CCeEEEEcccCccCCCCCChhhHhh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--K-GSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~-~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      ++++|++|||||... ..++.+.+.++|++.+++|+.+++++++++.+.|+  + .++||++||..++.+.++...|++|
T Consensus        74 ~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 3d3w_A           74 VGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             CCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCccCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHH
Confidence            678999999999865 46677889999999999999999999999999885  3 5899999999999988999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |++++.++++++.|+.+ +|+++.|+||+++|++.......+.....+....+.+++.+|+|+++.+.+++++...+++|
T Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (244)
T 3d3w_A          153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTG  232 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCC
Confidence            99999999999999987 99999999999999987643333333344455567888999999999999999887778999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.+++|||+..
T Consensus       233 ~~~~v~gG~~~  243 (244)
T 3d3w_A          233 STLPVEGGFWA  243 (244)
T ss_dssp             CEEEESTTGGG
T ss_pred             CEEEECCCccC
Confidence            99999999764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=7.2e-44  Score=291.93  Aligned_cols=239  Identities=22%  Similarity=0.376  Sum_probs=202.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++   +.++.++++|++++++++++++++.+.++
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFG   85 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            478999999999999999999999999999999999988877776665   45789999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCcc-----CCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--------CCeEEEEcccCccCCCC
Q 025273           89 KIDVVVSNAAANPSVDSIL-----QTKESVLDKLWDINVKSSILLLQDAAPHLQK--------GSSVVLISSIAGYQPQS  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~iv~iss~~~~~~~~  155 (255)
                      ++|+||||||.........     +.+.++|++.+++|+.+++++++++.+.|++        .++||++||..+..+.+
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  165 (265)
T 2o23_A           86 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV  165 (265)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             CCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCC
Confidence            9999999999865332222     4788999999999999999999999999863        47899999999988888


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhccc-CCCCCHHHHHHHHHHhc
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~  233 (255)
                      +...|+++|++++.|+++++.|+.+ +|++++|+||+++|++......  ..........+. +++.+|+|+++.+.+++
T Consensus       166 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  243 (265)
T 2o23_A          166 GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE--KVCNFLASQVPFPSRLGDPAEYAHLVQAII  243 (265)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH--HHHHHHHHcCCCcCCCCCHHHHHHHHHHHh
Confidence            9999999999999999999999987 9999999999999998764321  122223344566 78899999999999999


Q ss_pred             CCCCCCccccEEEeCCCcccC
Q 025273          234 SDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +  ..+++|+.+.+|||+..+
T Consensus       244 ~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          244 E--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             H--CTTCCSCEEEESTTCCCC
T ss_pred             h--cCccCceEEEECCCEecC
Confidence            5  467999999999998653

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=2.8e-44  Score=292.84  Aligned_cols=232  Identities=25%  Similarity=0.379  Sum_probs=202.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||++|||++++++|+++|++|++++|+.+.++.+.+ +...+.++..+     +.++++++++++.+.++++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            689999999999999999999999999999999888777655 55445454443     677888999999999999999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l  170 (255)
                      ||||||......++.+.+.++|++.+++|+.++++++++++|+|+  +.++||++||..+..+.+....|++||++++.|
T Consensus        76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  155 (254)
T 1zmt_A           76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL  155 (254)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHH
Confidence            999999873357788899999999999999999999999999985  468999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CeeEEEEeCCcc---------cCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          171 TKALAAEMAP-DTRVNCVAPGFV---------PTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       171 ~~~la~e~~~-~v~v~~v~pg~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +++++.|+.+ +|++|+|+||++         +|++...   .+..........+.+++.+|+|+++.++|++++...++
T Consensus       156 ~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~  232 (254)
T 1zmt_A          156 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYL  232 (254)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGG
T ss_pred             HHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCCc
Confidence            9999999988 999999999999         7776542   12333334455688889999999999999999988899


Q ss_pred             cccEEEeCCCccc
Q 025273          241 TGETLVVAGGMPS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      +|+.+.+|||+..
T Consensus       233 tG~~~~vdgG~~~  245 (254)
T 1zmt_A          233 TGQVFWLAGGFPM  245 (254)
T ss_dssp             TTCEEEESTTCCC
T ss_pred             cCCEEEECCCchh
Confidence            9999999999764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=4.9e-43  Score=288.89  Aligned_cols=246  Identities=30%  Similarity=0.463  Sum_probs=211.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++++|++|||||+||||++++++|+++|++|++++|+.+..+...+++.. ..++.++++|+++.++++++++++.+.+
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            347899999999999999999999999999999999998777666666532 2378999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCC-CChhhHhh
Q 025273           88 GKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQS-SMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~-~~~~y~~s  163 (255)
                      +++|++|||||.... ..++.+.+.++|++.+++|+.+++++++++++.|+  +.++||++||..++.+.+ +...|+++
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~s  170 (278)
T 2bgk_A           91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT  170 (278)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHH
Confidence            999999999998642 35677889999999999999999999999999986  467999999999988877 78899999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-ChhHHHHHHhh--cccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-NDGVRQTIEQN--TLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      |++++.+++.++.|+.+ +|+++.|+||+++|++...... ...........  .+.+++.+|+|+|+.+++++++...+
T Consensus       171 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  250 (278)
T 2bgk_A          171 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKY  250 (278)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCccccc
Confidence            99999999999999987 9999999999999998765433 22222222222  34577899999999999999988888


Q ss_pred             ccccEEEeCCCcccC
Q 025273          240 ITGETLVVAGGMPSR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      ++|+.+++|||...+
T Consensus       251 ~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          251 VSGLNLVIDGGYTRT  265 (278)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CCCCEEEECCccccc
Confidence            999999999998654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-43  Score=291.81  Aligned_cols=243  Identities=29%  Similarity=0.502  Sum_probs=214.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-CchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +++++|++|||||+||||++++++|+++|++|++++| +.+.++.+.+++...+.++.++++|+++.++++++++++.+.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999 777777777777766778999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-CCCCCChhhHhhHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-QPQSSMAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK~  165 (255)
                      ++++|++|||||... ..++.+.+.++|++.+++|+.+++++++++++.|+++++||++||..++ .+.+....|+++|+
T Consensus        97 ~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  175 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKA  175 (274)
T ss_dssp             HSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCCCchHHHHHH
Confidence            999999999999865 5667788999999999999999999999999998756899999999988 77888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc----------CC-hhHHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT----------SN-DGVRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      +++.+++.++.|+.+ +|+++.++||+++|++.....          .. +..........+.+++++|+|+++.+.+++
T Consensus       176 a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  255 (274)
T 1ja9_A          176 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC  255 (274)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence            999999999999987 999999999999999865211          11 233334445567788999999999999999


Q ss_pred             CCCCCCccccEEEeCCCc
Q 025273          234 SDDASYITGETLVVAGGM  251 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~  251 (255)
                      ++...+++|+.+++|||+
T Consensus       256 ~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          256 QEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             CcccccccCcEEEecCCc
Confidence            887788999999999996

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1e-43  Score=292.05  Aligned_cols=239  Identities=19%  Similarity=0.267  Sum_probs=196.7

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++ |++|||||++|||++++++|+++|++|++++|+.+.++.+.+++... .++.++++|+++.++++++++++.+.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   95 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF   95 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            3456 99999999999999999999999999999999998888877777543 578999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCC-eEEEEcccCccCCCCCChhhHhhH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGS-SVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~-~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|+||||||+.....++.+.+.++|++.+++|+.+++++++.++|.|+  +.+ +||++||..+..+.+....|+++|
T Consensus        96 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asK  175 (272)
T 2nwq_A           96 ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTK  175 (272)
T ss_dssp             SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHH
Confidence            99999999999865346788899999999999999999999999999985  356 999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.|+++++.|+.+ +|++|+|+||+++|++.........  .............+|+|+|+.++|++++ ..+++|+
T Consensus       176 aa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pedvA~~v~~l~s~-~~~~~g~  252 (272)
T 2nwq_A          176 AFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYDKTYAGAHPIQPEDIAETIFWIMNQ-PAHLNIN  252 (272)
T ss_dssp             HHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------CCCCBCHHHHHHHHHHHHTS-CTTEEEE
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch--HHHHHhhccCCCCCHHHHHHHHHHHhCC-CccCccc
Confidence            9999999999999988 9999999999999998643211110  0000111112346999999999999986 5679999


Q ss_pred             EEEeCCCc
Q 025273          244 TLVVAGGM  251 (255)
Q Consensus       244 ~i~~dgG~  251 (255)
                      .+.+|+|.
T Consensus       253 ~i~v~~~~  260 (272)
T 2nwq_A          253 SLEIMPVS  260 (272)
T ss_dssp             EEEEEETT
T ss_pred             eEEEeecc
Confidence            99999884

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=3.6e-44  Score=300.93  Aligned_cols=247  Identities=25%  Similarity=0.274  Sum_probs=198.8

Q ss_pred             cccCCCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEeCCchh------HHH-HHHHHHhc--CCe---EEEEEec---
Q 025273            7 AKRFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQKN------VDE-AVVKLKAR--GIE---VIGVVCH---   69 (255)
Q Consensus         7 ~~~l~~k~vlItGa--~~giG~~~a~~l~~~G~~V~~~~r~~~~------~~~-~~~~~~~~--~~~---~~~~~~D---   69 (255)
                      .+++++|++|||||  ++|||++++++|+++|++|++++|+...      .+. ..+++.+.  +..   ..++.+|   
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence            34588999999999  8999999999999999999999986410      000 01111111  110   2333333   


Q ss_pred             ---------CCC--------HHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCccCCCHHHHHHHHHHHhHHHHHHHHH
Q 025273           70 ---------VSN--------GQQRKNLINQTIEKFGKIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLLQD  131 (255)
Q Consensus        70 ---------v~~--------~~~v~~~~~~~~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  131 (255)
                               +++        .++++++++++.+.+|++|+||||||+.. ...++.+.+.++|++.+++|+.++++++++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                     332        56899999999999999999999999753 246778899999999999999999999999


Q ss_pred             HhhcccCCCeEEEEcccCccCCCCCC-hhhHhhHHHHHHHHHHHHHHhC--CCeeEEEEeCCcccCCccccccCC-----
Q 025273          132 AAPHLQKGSSVVLISSIAGYQPQSSM-AMYGVTKTALLGLTKALAAEMA--PDTRVNCVAPGFVPTHFAEYITSN-----  203 (255)
Q Consensus       132 ~~~~~~~~~~iv~iss~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~--~~v~v~~v~pg~v~t~~~~~~~~~-----  203 (255)
                      ++|+|+++++||++||..+..+.+.+ ..|++||+|++.|+++++.|+.  .+||||+|+||+++|++.......     
T Consensus       164 ~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~  243 (315)
T 2o2s_A          164 FGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSF  243 (315)
T ss_dssp             HSTTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCH
T ss_pred             HHHHHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchh
Confidence            99999877899999999998888877 5899999999999999999986  399999999999999987544211     


Q ss_pred             -hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          204 -DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       204 -~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                       ...........|.+++++|+|+|+.++||+++...+++|+.|.+|||+..
T Consensus       244 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  294 (315)
T 2o2s_A          244 IDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA  294 (315)
T ss_dssp             HHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeee
Confidence             11112233456889999999999999999999889999999999999753

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.9e-44  Score=292.99  Aligned_cols=239  Identities=24%  Similarity=0.317  Sum_probs=196.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH-hC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK-FG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   88 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|++++++++++++++.+. +|
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999999998888888887766778999999999999999999999886 89


Q ss_pred             CCCEEEEcCCC--C----CCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhh
Q 025273           89 KIDVVVSNAAA--N----PSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        89 ~~d~lv~~ag~--~----~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      ++|+||||||.  .    ....++.+.+.++|++++++|+.+++++.+.++|.|+  +.++||++||..+..+. +...|
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~Y  161 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVPY  161 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHHH
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCch
Confidence            99999999953  2    1245677888899999999999999999999999985  45899999999887644 46899


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHH--HHHH-hhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVR--QTIE-QNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      ++||++++.|+++++.|+.+ +|++|+|+||+++|++...........  .... ...+.++..+|+|+|+.++||+++.
T Consensus       162 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~  241 (260)
T 2qq5_A          162 GVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDP  241 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTCT
T ss_pred             HHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCc
Confidence            99999999999999999988 999999999999999875432211110  0011 1224455678999999999999988


Q ss_pred             C-CCccccEEEeCC
Q 025273          237 A-SYITGETLVVAG  249 (255)
Q Consensus       237 ~-~~~~G~~i~~dg  249 (255)
                      . .+++|+.|.+|+
T Consensus       242 ~~~~itG~~i~~~~  255 (260)
T 2qq5_A          242 NILSLSGKVLPSCD  255 (260)
T ss_dssp             TGGGGTTCEEEHHH
T ss_pred             ccccccceeechhh
Confidence            6 489999998763

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.6e-43  Score=294.75  Aligned_cols=245  Identities=24%  Similarity=0.269  Sum_probs=198.8

Q ss_pred             ccCCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchh-----------HHHHHHHHHhcC--CeEEEEEec---
Q 025273            8 KRFQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKN-----------VDEAVVKLKARG--IEVIGVVCH---   69 (255)
Q Consensus         8 ~~l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~~~~--~~~~~~~~D---   69 (255)
                      +++++|++|||||+  +|||++++++|+++|++|++++|+...           ++.+ +++....  .....+.+|   
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceec
Confidence            45789999999999  999999999999999999999876321           1111 1111000  113344443   


Q ss_pred             -----CC----C--------HHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCccCCCHHHHHHHHHHHhHHHHHHHHH
Q 025273           70 -----VS----N--------GQQRKNLINQTIEKFGKIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLLQD  131 (255)
Q Consensus        70 -----v~----~--------~~~v~~~~~~~~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  131 (255)
                           ++    +        +++++++++++.+.+|++|+||||||+.. ...++.+.+.++|++.+++|+.++++++++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                 32    2        66899999999999999999999999753 246778899999999999999999999999


Q ss_pred             HhhcccCCCeEEEEcccCccCCCCCC-hhhHhhHHHHHHHHHHHHHHhC-C-CeeEEEEeCCcccCCccccccCChhHHH
Q 025273          132 AAPHLQKGSSVVLISSIAGYQPQSSM-AMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAEYITSNDGVRQ  208 (255)
Q Consensus       132 ~~~~~~~~~~iv~iss~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~-~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~  208 (255)
                      ++|+|+++++||++||..+..+.+.. ..|++||+|++.|+++++.|+. + +||||+|+||+++|++.......+....
T Consensus       163 ~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~  242 (297)
T 1d7o_A          163 FLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIE  242 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHH
T ss_pred             HHHHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHH
Confidence            99999877899999999998888887 6999999999999999999986 3 9999999999999998764321123333


Q ss_pred             HHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          209 TIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       209 ~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ......+.+++++|+|+++.++||+++...+++|+.+.+|||+..
T Consensus       243 ~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~  287 (297)
T 1d7o_A          243 YSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             HHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcee
Confidence            344456888999999999999999998889999999999999764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1.6e-44  Score=303.61  Aligned_cols=246  Identities=26%  Similarity=0.305  Sum_probs=167.5

Q ss_pred             ccCCCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEeCCc-----------hhHH-----------HHHHHHHhcCCe-
Q 025273            8 KRFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQ-----------KNVD-----------EAVVKLKARGIE-   62 (255)
Q Consensus         8 ~~l~~k~vlItGa--~~giG~~~a~~l~~~G~~V~~~~r~~-----------~~~~-----------~~~~~~~~~~~~-   62 (255)
                      +++++|++|||||  ++|||++++++|+++|++|++++|+.           +.++           .+.+++...+.. 
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            3578999999999  89999999999999999999998753           1111           122222222210 


Q ss_pred             --EEEEEec------------CCC--------HHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCccCCCHHHHHHHHH
Q 025273           63 --VIGVVCH------------VSN--------GQQRKNLINQTIEKFGKIDVVVSNAAANP-SVDSILQTKESVLDKLWD  119 (255)
Q Consensus        63 --~~~~~~D------------v~~--------~~~v~~~~~~~~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~  119 (255)
                        ..++.+|            +++        .++++++++++.+.+|++|+||||||+.. ...++.+.+.++|+++++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~  164 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS  164 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence              2333333            333        45899999999999999999999999753 246778899999999999


Q ss_pred             HHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCC-hhhHhhHHHHHHHHHHHHHHhC-C-CeeEEEEeCCcccCCc
Q 025273          120 INVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSM-AMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHF  196 (255)
Q Consensus       120 ~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~-~-~v~v~~v~pg~v~t~~  196 (255)
                      +|+.++++++++++|+|+++++||++||..+..+.+.. ..|++||+|++.|+++++.|+. + +||||+|+||+++|++
T Consensus       165 vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~  244 (319)
T 2ptg_A          165 SSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA  244 (319)
T ss_dssp             HHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred             HhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence            99999999999999999877899999999998888877 6899999999999999999996 3 9999999999999998


Q ss_pred             cccccCC--h----hHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          197 AEYITSN--D----GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       197 ~~~~~~~--~----~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .......  +    ..........+.+++++|+|+|+.++||+++...+++|+.|.+|||+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  307 (319)
T 2ptg_A          245 ASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHA  307 (319)
T ss_dssp             ----------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTT
T ss_pred             hhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCcee
Confidence            7543211  0    1111122345778899999999999999999889999999999999764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=4.1e-43  Score=284.18  Aligned_cols=238  Identities=28%  Similarity=0.471  Sum_probs=210.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHhcCCeEEE-EEecCCCHHHHHHHHHHHHHHhCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIG-VVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +|++|||||+||||++++++|+++|++|+++ +|+.+.++.+.+++...+.++.+ +++|+++.++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998 89988888877777766666666 899999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|++|||||... ..++.+.+.++|++.+++|+.+++++++.+++.|+  +.++||++||..+..+.++...|+++|+++
T Consensus        81 ~d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (245)
T 2ph3_A           81 LDTLVNNAGITR-DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGL  159 (245)
T ss_dssp             CCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHH
Confidence            999999999865 46678889999999999999999999999999986  457999999998888888899999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.++++++.|+.+ +|+++.|+||+++|++....  .+..........+.+++.+|+|+++.+.+++++...+++|+.+.
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  237 (245)
T 2ph3_A          160 IGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLC  237 (245)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEE
Confidence            9999999999987 99999999999999987643  23333334445577888999999999999998877889999999


Q ss_pred             eCCCcc
Q 025273          247 VAGGMP  252 (255)
Q Consensus       247 ~dgG~~  252 (255)
                      +|||..
T Consensus       238 v~gg~~  243 (245)
T 2ph3_A          238 VDGGLT  243 (245)
T ss_dssp             ESTTCS
T ss_pred             ECCCCC
Confidence            999975

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=2.8e-43  Score=285.88  Aligned_cols=232  Identities=21%  Similarity=0.290  Sum_probs=192.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++++|++++++++++++++.+.+|++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            68999999999999999999999999999999988877776665   357889999999999999999999888999999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l  170 (255)
                      ||||||+.....++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..+..+.++...|++||++++.|
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  157 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF  157 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHH
Confidence            999999864346778899999999999999999999999999985  468999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CeeEEEEeCCccc-CCccccccC-ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          171 TKALAAEMAP-DTRVNCVAPGFVP-THFAEYITS-NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       171 ~~~la~e~~~-~v~v~~v~pg~v~-t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +++++.|+.+ +||+|+|+||+++ |++...... ........   .......+|+|+++.+.|++++ ..+++|+.+.+
T Consensus       158 ~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~---~~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~i~v  233 (248)
T 3asu_A          158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT---YQNTVALTPEDVSEAVWWVSTL-PAHVNINTLEM  233 (248)
T ss_dssp             HHHHHHHTTTSCCEEEEEEECSBCC-------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCEEEE
T ss_pred             HHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHH---HhccCCCCHHHHHHHHHHHhcC-CccceeeEEEE
Confidence            9999999988 9999999999999 998642211 11110000   1112346999999999999986 46789999999


Q ss_pred             CCCc
Q 025273          248 AGGM  251 (255)
Q Consensus       248 dgG~  251 (255)
                      +++.
T Consensus       234 ~~~~  237 (248)
T 3asu_A          234 MPVT  237 (248)
T ss_dssp             CCTT
T ss_pred             cccc
Confidence            9874

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-43  Score=284.45  Aligned_cols=238  Identities=24%  Similarity=0.371  Sum_probs=205.6

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +.++++|++|||||+||||++++++|+++|++|++++|+.+.++...+++    ....++++|+++.++++++++    .
T Consensus         2 ~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~   73 (244)
T 1cyd_A            2 KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----G   73 (244)
T ss_dssp             -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----T
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----H
Confidence            45578999999999999999999999999999999999987766554432    234566999999999988876    4


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--C-CCeEEEEcccCccCCCCCChhhHhh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--K-GSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~-~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      ++++|++|||||... ..++.+.+.++|++.+++|+.+++++++.+.+.|+  + .++||++||..++.+.++...|+++
T Consensus        74 ~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 1cyd_A           74 IGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSST  152 (244)
T ss_dssp             CCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHH
Confidence            678999999999865 46778889999999999999999999999999885  3 5799999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |++++.+++.++.++.+ +|+++.++||+++|++.......+..........+.+++..|+|+++.+.+++++...+++|
T Consensus       153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  232 (244)
T 1cyd_A          153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSG  232 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccC
Confidence            99999999999999987 99999999999999987543333444444555667788999999999999999988888999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.+.+|||+..
T Consensus       233 ~~~~v~gG~~~  243 (244)
T 1cyd_A          233 GGILVDAGYLA  243 (244)
T ss_dssp             SEEEESTTGGG
T ss_pred             CEEEECCCccC
Confidence            99999999864

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=4e-43  Score=306.92  Aligned_cols=240  Identities=27%  Similarity=0.368  Sum_probs=202.7

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+++|++|||||++|||++++++|+++|++|++++|+... +.+.+.....  .+.+++||+++.++++++++++.+.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            34689999999999999999999999999999999997532 2233333322  34578999999999999999999999


Q ss_pred             CC-CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           88 GK-IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 g~-~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ++ +|++|||||+.. ...+.+.+.++|++++++|+.|++++.+++.+.|+  +.++||++||..+..+.+++..|+++|
T Consensus       286 g~~id~lV~nAGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasK  364 (454)
T 3u0b_A          286 GGKVDILVNNAGITR-DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTK  364 (454)
T ss_dssp             TTCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCCceEEEECCcccC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHH
Confidence            75 999999999876 57888999999999999999999999999999876  568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      +++++|+++++.|+.+ ||++|+|+||+++|+|........  ........+.++.++|+|+++.+.||+++...++||+
T Consensus       365 aal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~  442 (454)
T 3u0b_A          365 AGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLAT--REVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGN  442 (454)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhh--HHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCc
Confidence            9999999999999987 999999999999999886543221  2233445677888999999999999999999999999


Q ss_pred             EEEeCCCccc
Q 025273          244 TLVVAGGMPS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      +|.+|||...
T Consensus       443 ~i~vdGG~~l  452 (454)
T 3u0b_A          443 TIRVCGQAML  452 (454)
T ss_dssp             EEEESSSBSC
T ss_pred             EEEECCcccc
Confidence            9999999753

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=5.7e-43  Score=291.78  Aligned_cols=230  Identities=26%  Similarity=0.394  Sum_probs=197.2

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      |.+++||++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.+++||+++.++++++++++.+.
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            34589999999999999999999999999999999999999999999988888889999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++   +++||++||..+..+.++...|++|
T Consensus       106 ~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  184 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVV-AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVA  184 (301)
T ss_dssp             HSSCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHH
Confidence            999999999999875 577888999999999999999999999999999863   6799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCCh--------hHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND--------GVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      |+|++.|+++++.|+.+ ||++++|+||+++|++........        .....+........+.+|+|+|+.++..+.
T Consensus       185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~  264 (301)
T 3tjr_A          185 KYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAIL  264 (301)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHh
Confidence            99999999999999988 999999999999999875432100        000111111223356799999999998885


Q ss_pred             CCC
Q 025273          235 DDA  237 (255)
Q Consensus       235 ~~~  237 (255)
                      .+.
T Consensus       265 ~~~  267 (301)
T 3tjr_A          265 ANR  267 (301)
T ss_dssp             HTC
T ss_pred             cCC
Confidence            543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-42  Score=278.56  Aligned_cols=230  Identities=19%  Similarity=0.282  Sum_probs=208.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +|++|||||+||||++++++|+++|+       +|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999       99999999988888888877667789999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHh
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      +.++++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++|+|+  +.++||++||..++.+.++...|++
T Consensus        82 ~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  160 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM  160 (244)
T ss_dssp             HHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HhCCCCCEEEEcCCcCC-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHH
Confidence            99999999999999875 56778889999999999999999999999999985  5689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +|++++.|+++++.|+.+ +|+++.|+||+++|++........           ..++.+|+|+|+.+++++++...+++
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----------~~~~~~~~dva~~~~~l~~~~~~~~~  229 (244)
T 2bd0_A          161 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----------QALMMMPEDIAAPVVQAYLQPSRTVV  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----------GGGSBCHHHHHHHHHHHHTSCTTEEE
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-----------cccCCCHHHHHHHHHHHHhCCccccc
Confidence            999999999999999988 999999999999999876542211           12567999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+++..++|...
T Consensus       230 g~~~~~~~~~~~  241 (244)
T 2bd0_A          230 EEIILRPTSGDI  241 (244)
T ss_dssp             EEEEEEETTCCC
T ss_pred             hheEEecccccc
Confidence            999999998653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=5.9e-44  Score=288.76  Aligned_cols=222  Identities=14%  Similarity=0.113  Sum_probs=196.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (255)
                      .++|++|||||++|||++++++|+++|++|++++|+.+..+          ....++++|++++++++++++++.+.+  
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   74 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLGD   74 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            56899999999999999999999999999999999976532          246778999999999999999999999  


Q ss_pred             CCCCEEEEcCCCCCCCCCc-cCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           88 GKIDVVVSNAAANPSVDSI-LQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      +++|+||||||... ..++ .+.+.++|++.+++|+.+++.++++++|+|+++++||++||..++.+.++...|+++|++
T Consensus        75 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  153 (241)
T 1dhr_A           75 QKVDAILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGA  153 (241)
T ss_dssp             CCEEEEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred             CCCCEEEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHHH
Confidence            79999999999865 3555 678889999999999999999999999999877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhC--C-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          167 LLGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       167 ~~~l~~~la~e~~--~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      ++.|+++++.|+.  + +|++|+|+||+++|++........          ...+..+|+|+|+.+.+++++...+++|+
T Consensus       154 ~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~~~~vA~~v~~l~~~~~~~~~G~  223 (241)
T 1dhr_A          154 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA----------DFSSWTPLEFLVETFHDWITGNKRPNSGS  223 (241)
T ss_dssp             HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS----------CGGGSEEHHHHHHHHHHHHTTTTCCCTTC
T ss_pred             HHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcch----------hhccCCCHHHHHHHHHHHhcCCCcCccce
Confidence            9999999999998  7 999999999999999865432211          11234579999999999999999999999


Q ss_pred             EEEeCCCcc
Q 025273          244 TLVVAGGMP  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      .+.+|||..
T Consensus       224 ~~~v~g~~~  232 (241)
T 1dhr_A          224 LIQVVTTDG  232 (241)
T ss_dssp             EEEEEEETT
T ss_pred             EEEEeCCCC
Confidence            999999875

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-43  Score=283.55  Aligned_cols=231  Identities=26%  Similarity=0.430  Sum_probs=194.9

Q ss_pred             cccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         5 ~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      ++...+++|++|||||+||||++++++|+++|++|++++|+.+.++    ++    +++.++ +|+  .++++++++++ 
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~----~~~~~~-~D~--~~~~~~~~~~~-   79 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS----GHRYVV-CDL--RKDLDLLFEKV-   79 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT----CSEEEE-CCT--TTCHHHHHHHS-
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh----CCeEEE-eeH--HHHHHHHHHHh-
Confidence            3445689999999999999999999999999999999999973322    22    256677 999  55666666654 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHh
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                         .++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|+  +.++||++||..++.+.++...|++
T Consensus        80 ---~~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (249)
T 1o5i_A           80 ---KEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNS  155 (249)
T ss_dssp             ---CCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             ---cCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHH
Confidence               37999999999765 56778889999999999999999999999999986  4579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHH-HHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQ-TIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +|++++.|+++++.|+.+ +|++|+|+||+++|++.....  +.... ......+.+++++|+|+|+.+++++++...++
T Consensus       156 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~  233 (249)
T 1o5i_A          156 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL--SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYL  233 (249)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc--hhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCC
Confidence            999999999999999988 999999999999999875432  22222 34445677889999999999999999888899


Q ss_pred             cccEEEeCCCccc
Q 025273          241 TGETLVVAGGMPS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      +|+.+.+|||...
T Consensus       234 tG~~~~vdgG~~~  246 (249)
T 1o5i_A          234 TGQTIVVDGGLSK  246 (249)
T ss_dssp             CSCEEEESTTCCC
T ss_pred             CCCEEEECCCccc
Confidence            9999999999764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.4e-42  Score=312.94  Aligned_cols=227  Identities=28%  Similarity=0.370  Sum_probs=195.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++||++|||||++|||++++++|+++|++|++.+|..  ++.+.+++...+.++..+.+|++  ++.+++++++.+++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            468899999999999999999999999999999998743  35566677666778888889994  45677889999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+  +.|+||++||..+..+.+.+..|++||+
T Consensus       394 G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKa  472 (604)
T 2et6_A          394 GTIDILVNNAGILR-DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKA  472 (604)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHH
Confidence            99999999999875 56788999999999999999999999999999995  4589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      |+.+|+++|+.|+.+ |||||+|+||+ .|+|.......           ......+|+|+++.+.||+++... ++|++
T Consensus       473 al~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~-----------~~~~~~~pe~vA~~v~~L~s~~~~-itG~~  539 (604)
T 2et6_A          473 GILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE-----------QDKNLYHADQVAPLLVYLGTDDVP-VTGET  539 (604)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------CCSSCGGGTHHHHHHTTSTTCC-CCSCE
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch-----------hhccCCCHHHHHHHHHHHhCCccC-CCCcE
Confidence            999999999999988 99999999996 99886532111           012346899999999999999888 99999


Q ss_pred             EEeCCCcc
Q 025273          245 LVVAGGMP  252 (255)
Q Consensus       245 i~~dgG~~  252 (255)
                      |.+|||+.
T Consensus       540 ~~vdGG~~  547 (604)
T 2et6_A          540 FEIGGGWI  547 (604)
T ss_dssp             EEEETTEE
T ss_pred             EEECCCee
Confidence            99999965

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-42  Score=282.58  Aligned_cols=233  Identities=27%  Similarity=0.407  Sum_probs=195.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++|++|||||+||||++++++|+++|++|++++|+.+.++...+++...  +.++.++++|++++++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999999999999988877777666543  4578999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-----CCeEEEEcccCccCCCCCChhhHh
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      |++|+||||||...         .++|++.+++|+.+++.+++.+++.|++     .++||++||..++.+.++...|++
T Consensus        85 g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (267)
T 2gdz_A           85 GRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  155 (267)
T ss_dssp             SCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHH
Confidence            99999999999743         2458999999999999999999999863     579999999999999899999999


Q ss_pred             hHHHHHHHHHHH--HHHhCC-CeeEEEEeCCcccCCccccccCChh------HHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          163 TKTALLGLTKAL--AAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG------VRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       163 sK~a~~~l~~~l--a~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      +|++++.|++++  +.|+.+ +||+|+|+||+++|++.........      .........+..++++|+|+|+.+++++
T Consensus       156 sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~  235 (267)
T 2gdz_A          156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI  235 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHh
Confidence            999999999995  578877 9999999999999998654322111      0111111122234679999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 025273          234 SDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++.  .++|+++.+|||...
T Consensus       236 s~~--~~~G~~~~v~gg~~~  253 (267)
T 2gdz_A          236 EDD--ALNGAIMKITTSKGI  253 (267)
T ss_dssp             HCT--TCSSCEEEEETTTEE
T ss_pred             cCc--CCCCcEEEecCCCcc
Confidence            875  389999999998754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=4.5e-43  Score=291.16  Aligned_cols=231  Identities=18%  Similarity=0.175  Sum_probs=186.8

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .+.+++||++|||||++|||++++++|+++|++|++++|+.+.++...+++   +.++.++++|+++.++++++++++  
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~--   84 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV--   84 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC--
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc--
Confidence            345689999999999999999999999999999999999988777655444   568999999999999999988866  


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC------------
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP------------  153 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~------------  153 (255)
                        +++|+||||||+..   +..+.+.++|++++++|+.|+++++++++|.|++  +||++||..++.+            
T Consensus        85 --~~iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--riv~isS~~~~~~~~~~~~~~~~~~  157 (291)
T 3rd5_A           85 --SGADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD--RVVTVSSMAHWPGRINLEDLNWRSR  157 (291)
T ss_dssp             --CCEEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE--EEEEECCGGGTTCCCCSSCTTCSSS
T ss_pred             --CCCCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--heeEeechhhccCCCCccccccccc
Confidence              68999999999864   2355678889999999999999999999999976  8999999987744            


Q ss_pred             -CCCChhhHhhHHHHHHHHHHHHHHhCC-C--eeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCC-HHHHHHH
Q 025273          154 -QSSMAMYGVTKTALLGLTKALAAEMAP-D--TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGT-TRDMAAA  228 (255)
Q Consensus       154 -~~~~~~y~~sK~a~~~l~~~la~e~~~-~--v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~a~~  228 (255)
                       .++...|++||+|++.|++.++.|+.+ +  |++|+|+||+++|++.......  .... ....+.++... |+|+|..
T Consensus       158 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~A~~  234 (291)
T 3rd5_A          158 RYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK--LGDA-LMSAATRVVATDADFGARQ  234 (291)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------CHHHHHHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH--HHHH-HHHHHHHHHhCCHHHHHHH
Confidence             345678999999999999999999976 5  9999999999999998754221  1111 12234455555 9999999


Q ss_pred             HHHhcCCCCCCccccEEEeCCCccc
Q 025273          229 AAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       229 ~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++|++++  .+++|+.+.+|||+..
T Consensus       235 ~~~l~~~--~~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          235 TLYAASQ--DLPGDSFVGPRFGYLG  257 (291)
T ss_dssp             HHHHHHS--CCCTTCEEEETTSSSS
T ss_pred             HHHHHcC--CCCCCceeCCcccccC
Confidence            9999988  3799999999999864

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.2e-42  Score=313.43  Aligned_cols=228  Identities=26%  Similarity=0.331  Sum_probs=198.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc---------hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ---------KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKN   78 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   78 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.         +.++.+.+++...+.+.   .+|+++.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHH
Confidence            357899999999999999999999999999999998765         66777777777666554   368888888999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCC
Q 025273           79 LINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSS  156 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~  156 (255)
                      +++++.+.||++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+  +.|+||++||..+..+.+.
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~  159 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILR-DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG  159 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence            99999999999999999999865 56788999999999999999999999999999996  4689999999999989999


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      ...|++||+|+.+|+++|+.|+.+ |||||+|+|| +.|+|...... +..          ....+|+|++..+.||+++
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~-~~~----------~~~~~pe~vA~~v~~L~s~  227 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP-PPM----------LEKLGPEKVAPLVLYLSSA  227 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC-HHH----------HTTCSHHHHHHHHHHHTSS
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC-hhh----------hccCCHHHHHHHHHHHhCC
Confidence            999999999999999999999988 9999999998 68887643221 111          1135899999999999999


Q ss_pred             CCCCccccEEEeCCCcc
Q 025273          236 DASYITGETLVVAGGMP  252 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~  252 (255)
                      . .+++|+++.+|||+.
T Consensus       228 ~-~~itG~~~~vdgG~~  243 (604)
T 2et6_A          228 E-NELTGQFFEVAAGFY  243 (604)
T ss_dssp             S-CCCCSCEEEEETTEE
T ss_pred             c-ccCCCCEEEECCCeE
Confidence            8 899999999999964

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5e-43  Score=282.44  Aligned_cols=221  Identities=20%  Similarity=0.176  Sum_probs=194.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      ++|++|||||++|||++++++|+++|++|++++|+.+..+          ....++++|+++.++++++++++.+.+  +
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   71 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQGS   71 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999999999976532          246778999999999999999999999  7


Q ss_pred             CCCEEEEcCCCCCCCCCc-cCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           89 KIDVVVSNAAANPSVDSI-LQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      ++|+||||||... ..++ .+.+.++|++.+++|+.+++++++.++|.|++.++||++||..++.+.++...|+++|+++
T Consensus        72 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  150 (236)
T 1ooe_A           72 QVDGVFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAV  150 (236)
T ss_dssp             CEEEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHH
Confidence            9999999999865 3555 6778899999999999999999999999997778999999999999999999999999999


Q ss_pred             HHHHHHHHHHhC--C-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHH-HhcCCCCCCcccc
Q 025273          168 LGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAA-FLASDDASYITGE  243 (255)
Q Consensus       168 ~~l~~~la~e~~--~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~-~l~s~~~~~~~G~  243 (255)
                      +.|+++++.|+.  + +|++|+|+||+++|++........          ...+..+|+|+|+.+. +++++...+++|+
T Consensus       151 ~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~  220 (236)
T 1ooe_A          151 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA----------DHSSWTPLSFISEHLLKWTTETSSRPSSGA  220 (236)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTC----------CGGGCBCHHHHHHHHHHHHHCGGGCCCTTC
T ss_pred             HHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCCc----------cccccCCHHHHHHHHHHHHcCCCccccccc
Confidence            999999999997  7 999999999999999865432211          1234568999999998 5658888899999


Q ss_pred             EEEeCCCcc
Q 025273          244 TLVVAGGMP  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      .+.+|||..
T Consensus       221 ~~~v~gg~~  229 (236)
T 1ooe_A          221 LLKITTENG  229 (236)
T ss_dssp             EEEEEEETT
T ss_pred             EEEEecCCC
Confidence            999999875

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.8e-42  Score=278.15  Aligned_cols=223  Identities=20%  Similarity=0.230  Sum_probs=183.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++++|+++.++++++++++.+   .+|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~   75 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS---IPST   75 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS---CCSE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh---cCCE
Confidence            67999999999999999999999999999999988877666554   56788999999999999999886643   3599


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-CCeEEEEcccCccCCCCCChhhHhhHHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~  171 (255)
                      +|||||... ..++.+.+.++|++.+++|+.+++++++.++|.|++ +++||++||..+..+.+....|++||+|++.|+
T Consensus        76 lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  154 (230)
T 3guy_A           76 VVHSAGSGY-FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLI  154 (230)
T ss_dssp             EEECCCCCC-CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EEEeCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHH
Confidence            999999876 678888999999999999999999999999999874 559999999999999999999999999999999


Q ss_pred             HHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcC-CCCCCccccEEEeCC
Q 025273          172 KALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS-DDASYITGETLVVAG  249 (255)
Q Consensus       172 ~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s-~~~~~~~G~~i~~dg  249 (255)
                      ++++.|+.+ +|++|+|+||+++|++......          ..+.+++.+|+|+|+.+.++++ +...+++|+.+..+.
T Consensus       155 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~~  224 (230)
T 3guy_A          155 ESVRLELKGKPMKIIAVYPGGMATEFWETSGK----------SLDTSSFMSAEDAALMIHGALANIGNGYVSDITVNREG  224 (230)
T ss_dssp             HHHHHHTTTSSCEEEEEEECCC--------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC--
T ss_pred             HHHHHHHHhcCeEEEEEECCcccChHHHhcCC----------CCCcccCCCHHHHHHHHHHHHhCcCCCCccceeecCCC
Confidence            999999988 9999999999999998754322          1245678899999999999987 567789999999887


Q ss_pred             Ccc
Q 025273          250 GMP  252 (255)
Q Consensus       250 G~~  252 (255)
                      ...
T Consensus       225 ~~~  227 (230)
T 3guy_A          225 HHH  227 (230)
T ss_dssp             ---
T ss_pred             CCC
Confidence            654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=6.5e-43  Score=284.27  Aligned_cols=221  Identities=17%  Similarity=0.159  Sum_probs=196.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ..+|++|||||++|||++++++|+++|++|++++|+.+..+.            ..+.+|+++.++++++++++.+.+++
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------------~~~~~d~~d~~~v~~~~~~~~~~~g~   87 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------------HSFTIKDSGEEEIKSVIEKINSKSIK   87 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------------EEEECSCSSHHHHHHHHHHHHTTTCC
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------------cceEEEeCCHHHHHHHHHHHHHHcCC
Confidence            447999999999999999999999999999999999765321            24789999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      +|++|||||+......+.+.+.++|++.+++|+.+++++++++++.|+++++||++||..+..+.+....|+++|+|++.
T Consensus        88 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  167 (251)
T 3orf_A           88 VDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHH  167 (251)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             CCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHH
Confidence            99999999987644457788899999999999999999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHhC--C-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC-CCCCccccEE
Q 025273          170 LTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD-DASYITGETL  245 (255)
Q Consensus       170 l~~~la~e~~--~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~-~~~~~~G~~i  245 (255)
                      |+++++.|+.  + +|++++|+||+++|++.......          .+.+++.+|+|+|+.+++++++ ...+++|+++
T Consensus       168 ~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i  237 (251)
T 3orf_A          168 IIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD----------ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLV  237 (251)
T ss_dssp             HHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT----------SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred             HHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc----------ccccccCCHHHHHHHHHHHhcCccccCCcceEE
Confidence            9999999986  5 99999999999999886544332          2456678999999999999999 7889999999


Q ss_pred             EeCCCcc
Q 025273          246 VVAGGMP  252 (255)
Q Consensus       246 ~~dgG~~  252 (255)
                      .+++|..
T Consensus       238 ~v~~g~~  244 (251)
T 3orf_A          238 KFETKSK  244 (251)
T ss_dssp             EEEEETT
T ss_pred             EEecCCc
Confidence            9988764

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.4e-41  Score=277.02  Aligned_cols=240  Identities=25%  Similarity=0.395  Sum_probs=202.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+  .++.++++|+++.++++++++++.+
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  107 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS  107 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999988888877776653  5788999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-C---CCeEEEEcccCcc--CCCCCChh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-K---GSSVVLISSIAGY--QPQSSMAM  159 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~---~~~iv~iss~~~~--~~~~~~~~  159 (255)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.+++.|+ .   +++||++||..+.  .+.++...
T Consensus       108 ~~g~iD~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (279)
T 1xg5_A          108 QHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF  186 (279)
T ss_dssp             HHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred             hCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCch
Confidence            9999999999999865 46777889999999999999999999999999986 2   2799999999887  56777889


Q ss_pred             hHhhHHHHHHHHHHHHHHhC--C-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          160 YGVTKTALLGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~--~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      |+++|++++.|++.++.|+.  + +|++++|+||+++|++.........  .......+..++.+|+|+|+.++++++++
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~dvA~~i~~l~~~~  264 (279)
T 1xg5_A          187 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPEDVAEAVIYVLSTP  264 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH--HHHHHHHC---CBCHHHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh--hHHhhhcccccCCCHHHHHHHHHHHhcCC
Confidence            99999999999999999986  5 9999999999999998533222111  11122234456789999999999999988


Q ss_pred             CCCccccEEEeCCC
Q 025273          237 ASYITGETLVVAGG  250 (255)
Q Consensus       237 ~~~~~G~~i~~dgG  250 (255)
                      ..+.+|+....++|
T Consensus       265 ~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          265 AHIQIGDIQMRPTG  278 (279)
T ss_dssp             TTEEEEEEEEEETT
T ss_pred             cceEeeeEEEccCC
Confidence            88888875544443

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1.4e-41  Score=285.27  Aligned_cols=231  Identities=23%  Similarity=0.353  Sum_probs=198.4

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe---------CCchhHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS---------RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQR   76 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~---------r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   76 (255)
                      ..++++||++|||||++|||++++++|+++|++|++++         |+.+.++...+++...+..+   .+|+++.+++
T Consensus         3 ~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~   79 (319)
T 1gz6_A            3 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAG   79 (319)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHH
Confidence            33567899999999999999999999999999999964         46677777777776655443   4899999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCC
Q 025273           77 KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQ  154 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~  154 (255)
                      +++++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..+..+.
T Consensus        80 ~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~  158 (319)
T 1gz6_A           80 EKLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN  158 (319)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC
Confidence            9999999999999999999999875 45678889999999999999999999999999986  45899999999888888


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      +++..|++||++++.|++.+++|+.+ +|++|+|+||++ |++...... ....          ...+|+|++..++|++
T Consensus       159 ~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~-~~~~----------~~~~p~dvA~~~~~l~  226 (319)
T 1gz6_A          159 FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP-EDLV----------EALKPEYVAPLVLWLC  226 (319)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC-HHHH----------HHSCGGGTHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC-hhhh----------ccCCHHHHHHHHHHHh
Confidence            88999999999999999999999988 999999999998 877543221 1111          1358999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 025273          234 SDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++. .+++|+.+.+|||+..
T Consensus       227 s~~-~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          227 HES-CEENGGLFEVGAGWIG  245 (319)
T ss_dssp             STT-CCCCSCEEEEETTEEE
T ss_pred             Cch-hhcCCCEEEECCCeEE
Confidence            874 5789999999999753

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=3.4e-41  Score=283.16  Aligned_cols=229  Identities=24%  Similarity=0.342  Sum_probs=189.7

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCC--eEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++...+.  ++.++++|+++.++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999999988888876654  899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--------CCCeEEEEcccCccCCCCCC
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--------KGSSVVLISSIAGYQPQSSM  157 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--------~~~~iv~iss~~~~~~~~~~  157 (255)
                      .++++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|.        +.++||++||..+..+.+..
T Consensus        84 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~  162 (319)
T 3ioy_A           84 RFGPVSILCNNAGVNL-FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP  162 (319)
T ss_dssp             HTCCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS
T ss_pred             hCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC
Confidence            9999999999999865 57888999999999999999999999999999985        26899999999999999999


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHH---------HHhhcc-cCCCCCHHHHH
Q 025273          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQT---------IEQNTL-LNRLGTTRDMA  226 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~d~a  226 (255)
                      ..|++||+|+++|+++++.|+.+ +|++++|+||+++|++.............         ...... .....+|+++|
T Consensus       163 ~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA  242 (319)
T 3ioy_A          163 GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIG  242 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHH
Confidence            99999999999999999999988 99999999999999987644222111000         000000 11126999999


Q ss_pred             HHHHHhcCCCC
Q 025273          227 AAAAFLASDDA  237 (255)
Q Consensus       227 ~~~~~l~s~~~  237 (255)
                      +.++..+....
T Consensus       243 ~~~~~al~~~~  253 (319)
T 3ioy_A          243 ARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHHcCC
Confidence            99998876543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=8.4e-42  Score=278.15  Aligned_cols=227  Identities=17%  Similarity=0.237  Sum_probs=188.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCH-HHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNG-QQRKNLINQTI   84 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~-~~v~~~~~~~~   84 (255)
                      ++++|++|||||+||||++++++|+++|++ |++++|+.+.  ...+++...  +.++.++++|++++ ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            367999999999999999999999999997 9999998742  122233222  45889999999998 99999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-----CCeEEEEcccCccCCCCCChh
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAM  159 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~iss~~~~~~~~~~~~  159 (255)
                      +.++++|++|||||..         +.++|++.+++|+.++++++++++|.|++     .++||++||..++.+.+....
T Consensus        80 ~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (254)
T 1sby_A           80 DQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             HhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchH
Confidence            9999999999999974         24568999999999999999999999853     478999999999999999999


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC---hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN---DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      |++||++++.|+++++.++.+ +|++++|+||+++|++.......   ...........+   ..+|+|+|+.++++++ 
T Consensus       151 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dvA~~i~~~~~-  226 (254)
T 1sby_A          151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHP---TQTSEQCGQNFVKAIE-  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSC---CEEHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCC---CCCHHHHHHHHHHHHH-
Confidence            999999999999999999876 99999999999999987543211   111112222222   3489999999999985 


Q ss_pred             CCCCccccEEEeCCCcc
Q 025273          236 DASYITGETLVVAGGMP  252 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~  252 (255)
                        .+.+|+.+.+|||..
T Consensus       227 --~~~~G~~~~v~gG~~  241 (254)
T 1sby_A          227 --ANKNGAIWKLDLGTL  241 (254)
T ss_dssp             --HCCTTCEEEEETTEE
T ss_pred             --cCCCCCEEEEeCCce
Confidence              457899999999964

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=7.6e-42  Score=289.02  Aligned_cols=241  Identities=12%  Similarity=0.100  Sum_probs=201.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEeCCchhHH------------HHHHHHHhcCCeEEEEEecCCCHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGL-EGASVVVSSRKQKNVD------------EAVVKLKARGIEVIGVVCHVSNGQQR   76 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~-~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~Dv~~~~~v   76 (255)
                      ..+|++|||||++|||+++++.|++ +|++|++++|+.+..+            .+.+++...+.++..+++|+++++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            3589999999999999999999999 9999999998765432            23445555677899999999999999


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCC------------CCCCc---------------------cCCCHHHHHHHHHHHhH
Q 025273           77 KNLINQTIEKFGKIDVVVSNAAANP------------SVDSI---------------------LQTKESVLDKLWDINVK  123 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~------------~~~~~---------------------~~~~~~~~~~~~~~n~~  123 (255)
                      +++++++.+.||++|+||||||...            ..+++                     .+.+.++|++++++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            9999999999999999999999741            12344                     67899999999999999


Q ss_pred             HHH-HHHHHHhh-cc-cCCCeEEEEcccCccCCCCCC--hhhHhhHHHHHHHHHHHHHHhCC--CeeEEEEeCCcccCCc
Q 025273          124 SSI-LLLQDAAP-HL-QKGSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHF  196 (255)
Q Consensus       124 ~~~-~~~~~~~~-~~-~~~~~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~--~v~v~~v~pg~v~t~~  196 (255)
                      +.| .+++++.+ .| .++++||++||..+..+.+.+  ..|++||+|+++|+|+|+.|+.+  |||+|+|+||++.|++
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~  284 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQA  284 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHH
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCch
Confidence            998 77777764 44 356899999999999888877  99999999999999999999965  7999999999999998


Q ss_pred             cccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccCC
Q 025273          197 AEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSRL  255 (255)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                      ...+...+. ..... ..++++.++|+|+++.+.||+++   ++.|+.+.+|++...|+
T Consensus       285 s~~ip~~p~-y~~~l-~~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r~  338 (405)
T 3zu3_A          285 SSAIPMMPL-YLSLL-FKVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLRA  338 (405)
T ss_dssp             HHTSTTHHH-HHHHH-HHHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEEC
T ss_pred             hhcCCCCcH-HHHHH-HHHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCCC
Confidence            776543222 22111 22688899999999999999987   56788889999876653

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=2e-42  Score=295.14  Aligned_cols=242  Identities=16%  Similarity=0.126  Sum_probs=199.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEeCCchhHH------------HHHHHHHhcCCeEEEEEecCCCHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGL-EGASVVVSSRKQKNVD------------EAVVKLKARGIEVIGVVCHVSNGQQRK   77 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~-~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~Dv~~~~~v~   77 (255)
                      .+|++|||||++|||+++++.|++ +|++|++++|+.+.++            .+.+++...+.++..+++|++++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            489999999999999999999999 9999999999876533            234556666788999999999999999


Q ss_pred             HHHHHHHHHh-CCCCEEEEcCCCC------------CCCCCc---------------------cCCCHHHHHHHHHHHhH
Q 025273           78 NLINQTIEKF-GKIDVVVSNAAAN------------PSVDSI---------------------LQTKESVLDKLWDINVK  123 (255)
Q Consensus        78 ~~~~~~~~~~-g~~d~lv~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~~~n~~  123 (255)
                      ++++.+.+.+ |++|+||||||..            ...+++                     .+.+.++|++++++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 9999999999972            112333                     36799999999999999


Q ss_pred             HHH-HHHHHHhh-cc-cCCCeEEEEcccCccCCCCCC--hhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcc
Q 025273          124 SSI-LLLQDAAP-HL-QKGSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFA  197 (255)
Q Consensus       124 ~~~-~~~~~~~~-~~-~~~~~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~  197 (255)
                      +.| .+++.+.+ .| +++++||++||..+..+.+.+  ..|++||+|+.+|+|+|+.|+.+ |||||+|+||+++|++.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            987 77887765 34 356899999999998877766  89999999999999999999998 99999999999999998


Q ss_pred             ccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc-ccEEEeCCCcccCC
Q 025273          198 EYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT-GETLVVAGGMPSRL  255 (255)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~-G~~i~~dgG~~~~~  255 (255)
                      ..+...+....  ....++++.++|+|+++.+.||+++.- +.+ |+...+|++...|+
T Consensus       300 ~~ip~~~~~~~--~~~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r~  355 (422)
T 3s8m_A          300 AAIPVMPLYIS--MVYKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLRL  355 (422)
T ss_dssp             GGSTHHHHHHH--HHHHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEES
T ss_pred             hcCCCChHHHH--HHHhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCcc
Confidence            76543222111  122378899999999999999998754 443 77666888776553

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=4.5e-41  Score=277.75  Aligned_cols=234  Identities=26%  Similarity=0.368  Sum_probs=196.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++   +.++.++++|+++.++++++++++.+.+++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARYGR   79 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999999999988877655443   568999999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|+||||||... ..++.+.+.++|++.+++|+.|++.+++.++|.|+  +.++||++||..+..+.++...|++||+++
T Consensus        80 id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (281)
T 3m1a_A           80 VDVLVNNAGRTQ-VGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAAL  158 (281)
T ss_dssp             CSEEEECCCCEE-ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCcCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHH
Confidence            999999999865 56778899999999999999999999999999986  468999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-----ChhH------HHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-----NDGV------RQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-----~~~~------~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      +.|+++++.|+.+ +|++++|+||+++|++......     ....      ........+.+++.+|+|+|++++++++.
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~  238 (281)
T 3m1a_A          159 EQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDT  238 (281)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhC
Confidence            9999999999988 9999999999999998643211     1111      11233345667788999999999999977


Q ss_pred             CCCCccccEEEeCCC
Q 025273          236 DASYITGETLVVAGG  250 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG  250 (255)
                      +.   .+..+.+.++
T Consensus       239 ~~---~~~~~~l~s~  250 (281)
T 3m1a_A          239 EK---TPLRLALGGD  250 (281)
T ss_dssp             SS---CCSEEEESHH
T ss_pred             CC---CCeEEecCch
Confidence            64   3555666543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7.1e-41  Score=270.44  Aligned_cols=225  Identities=23%  Similarity=0.329  Sum_probs=194.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||+||||++++++|+++|++|++++|+.+ .           .++.++++|+++.++++++++++ +.++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d   68 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEEAPLF   68 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCce
Confidence            689999999999999999999999999999999875 1           13478899999999999999999 8889999


Q ss_pred             EEEEcCCCCCCCCCccCCC----HHHHHHHHHHHhHHHHHHHHHHhhcccCCC--------eEEEEcccCccCCCCCChh
Q 025273           92 VVVSNAAANPSVDSILQTK----ESVLDKLWDINVKSSILLLQDAAPHLQKGS--------SVVLISSIAGYQPQSSMAM  159 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~iv~iss~~~~~~~~~~~~  159 (255)
                      ++|||||... ..++.+.+    .++|++.+++|+.+++++++++.+.|++.+        +||++||..++.+.++...
T Consensus        69 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  147 (242)
T 1uay_A           69 AVVSAAGVGL-AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA  147 (242)
T ss_dssp             EEEECCCCCC-CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             EEEEcccccC-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence            9999999865 34444443    458999999999999999999999986432        9999999999888889999


Q ss_pred             hHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhccc-CCCCCHHHHHHHHHHhcCCCC
Q 025273          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      |+++|++++.+++.++.|+.+ +|+++.|+||+++|++....  .+..........+. +++.+|+|+++.+++++++  
T Consensus       148 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--  223 (242)
T 1uay_A          148 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc--chhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC--
Confidence            999999999999999999987 99999999999999987643  22333344445566 8889999999999999977  


Q ss_pred             CCccccEEEeCCCcccC
Q 025273          238 SYITGETLVVAGGMPSR  254 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~~  254 (255)
                      .+++|+.+.+|||+..+
T Consensus       224 ~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          224 PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             TTCCSCEEEESTTCCCC
T ss_pred             CCCCCcEEEEcCCeecC
Confidence            67899999999998653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=2.6e-40  Score=266.13  Aligned_cols=222  Identities=23%  Similarity=0.307  Sum_probs=186.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .+|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++    .++.++++|+++.++++++++++.+.++++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL----EGALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----hhceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            3789999999999999999999999999999999987776665544    267889999999999999999999999999


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      |++|||||... ..++.+.+.++|++.+++|+.+++.+++.+++.|++  .++||++||..++.+.++...|+++|++++
T Consensus        80 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  158 (234)
T 2ehd_A           80 SALVNNAGVGV-MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLL  158 (234)
T ss_dssp             CEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHH
Confidence            99999999865 567788899999999999999999999999999863  579999999999998899999999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      .++++++.|+.+ +|+++.|+||+++|++.....  ..    .       ...+|+|+|+.+.++++++..+++|+++..
T Consensus       159 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~----~-------~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~  225 (234)
T 2ehd_A          159 GLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP--GQ----A-------WKLKPEDVAQAVLFALEMPGHAMVSEIELR  225 (234)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEECC-----------------------------CCHHHHHHHHHHHHHSCCSSCCCEEECC
T ss_pred             HHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc--cc----c-------CCCCHHHHHHHHHHHhCCCcccccceEEEe
Confidence            999999999987 999999999999999765321  00    0       146999999999999999888999997765


Q ss_pred             CCC
Q 025273          248 AGG  250 (255)
Q Consensus       248 dgG  250 (255)
                      ++.
T Consensus       226 ~~~  228 (234)
T 2ehd_A          226 PTR  228 (234)
T ss_dssp             C--
T ss_pred             ecC
Confidence            554

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-40  Score=269.13  Aligned_cols=222  Identities=20%  Similarity=0.249  Sum_probs=188.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++|++|||||+||||++++++|+++|  ++|++++|+.+.++.+.+.   .+.++.++++|+++.++++++++++.+.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence            57999999999999999999999999  9999999998876654322   356899999999999999999999999998


Q ss_pred             --CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--------C-----CCeEEEEcccCccCC
Q 025273           89 --KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--------K-----GSSVVLISSIAGYQP  153 (255)
Q Consensus        89 --~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--------~-----~~~iv~iss~~~~~~  153 (255)
                        ++|+||||||......++.+.+.+++++.+++|+.+++++++++++.|+        +     .++||++||..+..+
T Consensus        79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  158 (250)
T 1yo6_A           79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence              9999999999875456778889999999999999999999999999885        2     589999999988776


Q ss_pred             C-------CCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHH
Q 025273          154 Q-------SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDM  225 (255)
Q Consensus       154 ~-------~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  225 (255)
                      .       ++...|+++|++++.|+++++.++.+ +|++++|+||+++|++...                 ....+|+|+
T Consensus       159 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~~~~  221 (250)
T 1yo6_A          159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------NAALTVEQS  221 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------HHH
T ss_pred             CcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------CCCCCHHHH
Confidence            5       67889999999999999999999987 9999999999999998642                 124689999


Q ss_pred             HHHHHHhcCCCCCCccccEEEeCCCcc
Q 025273          226 AAAAAFLASDDASYITGETLVVAGGMP  252 (255)
Q Consensus       226 a~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++.++++++.....++|+.+.+|||..
T Consensus       222 a~~~~~~~~~~~~~~~G~~~~~~g~~~  248 (250)
T 1yo6_A          222 TAELISSFNKLDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             HHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred             HHHHHHHHhcccccCCCeEEEECCcCC
Confidence            999999999888889999999999853

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2.8e-41  Score=305.56  Aligned_cols=231  Identities=26%  Similarity=0.348  Sum_probs=185.7

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC---------CchhHHHHHHHHHhcCCeEEEEEecCCCHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSR---------KQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRK   77 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   77 (255)
                      ..+++||++|||||++|||++++++|+++|++|++++|         +.+.++.+.+++...+..+   .+|+++.++++
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~~~   90 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVIDGA   90 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGGHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHHHH
Confidence            35688999999999999999999999999999999988         6777788888887766554   37999999999


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCC
Q 025273           78 NLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQS  155 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~  155 (255)
                      ++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|++  .++||++||.++..+.+
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~  169 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILR-DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF  169 (613)
T ss_dssp             HHHC----------CEECCCCCCC-CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence            999999999999999999999876 577889999999999999999999999999999973  47999999999999999


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      ....|++||+|+++|+++++.|+.+ ||+||+|+||++ |++....... ..          .+..+|+|+++.+.||++
T Consensus       170 ~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~-~~----------~~~~~pedvA~~v~~L~s  237 (613)
T 3oml_A          170 GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPD-IL----------FNELKPKLIAPVVAYLCH  237 (613)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCH-HH----------HTTCCGGGTHHHHHHTTS
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccch-hh----------hhcCCHHHHHHHHHHhcC
Confidence            9999999999999999999999988 999999999975 5555433221 11          124589999999999999


Q ss_pred             CCCCCccccEEEeCCCcccC
Q 025273          235 DDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +. .+++|+++.+|||+..+
T Consensus       238 ~~-~~~tG~~i~vdGG~~~~  256 (613)
T 3oml_A          238 ES-CEDNGSYIESAAGWATK  256 (613)
T ss_dssp             TT-CCCCSCEEEEETTEEEE
T ss_pred             CC-cCCCceEEEECCCeEEE
Confidence            98 88999999999998653

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-39  Score=273.32  Aligned_cols=237  Identities=21%  Similarity=0.242  Sum_probs=184.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-----chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-----QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +++|++|||||+||||++++++|+++|++|++++|+     .+.++.+.+.+...+.++.++++|++++++++++++++.
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            358999999999999999999999999999988775     455566666666667899999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccC-CCCCChhhH
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQ-PQSSMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~-~~~~~~~y~  161 (255)
                      +.+|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+  +.++||++||..+.. +.+....|+
T Consensus        83 ~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~  161 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMV-FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYF  161 (324)
T ss_dssp             HHHSCCSEEEECCCCCB-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHH
T ss_pred             HHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHH
Confidence            99999999999999875 57888999999999999999999999999999996  568999999998874 456678999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC--C--hhHHHHHH------------h--hcccCCCCCH
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--N--DGVRQTIE------------Q--NTLLNRLGTT  222 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~--~--~~~~~~~~------------~--~~~~~~~~~~  222 (255)
                      +||+|++.|+++++.|+.+ ||++++|+||+++|++......  .  ......+.            .  ........+|
T Consensus       162 asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p  241 (324)
T 3u9l_A          162 AAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADV  241 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCT
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCH
Confidence            9999999999999999988 9999999999999775432211  1  11000000            0  0112223578


Q ss_pred             HHHHHHHHHhcCCCCCCccccEEEeC
Q 025273          223 RDMAAAAAFLASDDASYITGETLVVA  248 (255)
Q Consensus       223 ~d~a~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      +++++.++.++..+.. .....+.++
T Consensus       242 ~~vA~aiv~~~~~~~~-~~~~~~~~g  266 (324)
T 3u9l_A          242 SLVADAIVRVVGTASG-KRPFRVHVD  266 (324)
T ss_dssp             HHHHHHHHHHHTSCTT-CCCSEEEEC
T ss_pred             HHHHHHHHHHhcCCCC-CCCeEEEeC
Confidence            8899988888865532 123445554

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=7.9e-40  Score=268.26  Aligned_cols=226  Identities=19%  Similarity=0.223  Sum_probs=197.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcC---CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEG---ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      ..+++|++|||||++|||++++++|+++|   ++|++++|+.+.++.+ +++...+.++.++.+|+++.++++++++++.
T Consensus        17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence            45789999999999999999999999999   9999999998766644 3444446689999999999999999999999


Q ss_pred             HHhC--CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-------------CCeEEEEcccC
Q 025273           85 EKFG--KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------------GSSVVLISSIA  149 (255)
Q Consensus        85 ~~~g--~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------------~~~iv~iss~~  149 (255)
                      +.++  ++|+||||||......++.+.+.+++++.+++|+.+++++++++++.|++             .++||++||..
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  175 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  175 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence            9998  89999999998764567788899999999999999999999999998852             47999999998


Q ss_pred             ccCCC---CCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHH
Q 025273          150 GYQPQ---SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDM  225 (255)
Q Consensus       150 ~~~~~---~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  225 (255)
                      +..+.   ++...|+++|++++.|++.++.++.+ +|++++|+||+++|++...                 ....+|+++
T Consensus       176 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~~~~  238 (267)
T 1sny_A          176 GSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------SAPLDVPTS  238 (267)
T ss_dssp             GCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------TCSBCHHHH
T ss_pred             ccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------CCCCCHHHH
Confidence            87665   37788999999999999999999987 9999999999999998632                 124689999


Q ss_pred             HHHHHHhcCCCCCCccccEEEeCCCc
Q 025273          226 AAAAAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       226 a~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ++.++++++.....++|+.+.+||+.
T Consensus       239 a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          239 TGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            99999999888888999999999986

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-39  Score=266.56  Aligned_cols=217  Identities=21%  Similarity=0.318  Sum_probs=192.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|+++.++++++++++.+.+
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            45789999999999999999999999999999999999988888888887777789999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      +++|++|||||... ..++.+.+.++|++.+++|+.+++++++.+++.|+  +.++||++||..++.+.++...|+++|+
T Consensus       107 g~iD~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  185 (272)
T 1yb1_A          107 GDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKF  185 (272)
T ss_dssp             CCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHH
T ss_pred             CCCcEEEECCCcCC-CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHH
Confidence            99999999999865 46677788899999999999999999999999985  4579999999999888788889999999


Q ss_pred             HHHHHHHHHHHHhC---C-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          166 ALLGLTKALAAEMA---P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       166 a~~~l~~~la~e~~---~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +++.|+++++.|+.   + +|++++|+||+++|++...    .        ..+.+++.+|+|+|+.+++++....
T Consensus       186 a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~----~--------~~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          186 AAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----P--------STSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----T--------HHHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc----c--------cccccCCCCHHHHHHHHHHHHHcCC
Confidence            99999999999984   4 9999999999999998531    1        1134567899999999999987654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=7e-39  Score=267.86  Aligned_cols=219  Identities=27%  Similarity=0.312  Sum_probs=185.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecCCCH-HHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNG-QQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~-~~v~~~~~~~~~~   86 (255)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+ .++.++++|+++. ++++.+++.+.+.
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999999999888888887664 5899999999998 9999999999999


Q ss_pred             hCCCCEEEEcCCCCCC-----------------------------CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc
Q 025273           87 FGKIDVVVSNAAANPS-----------------------------VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ  137 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~-----------------------------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  137 (255)
                      ++++|+||||||+...                             ...+.+.+.+++++.+++|+.|++.+++.++|+|+
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence            9999999999998631                             12345678899999999999999999999999986


Q ss_pred             --CCCeEEEEcccCccCCC-------------------------------------------CCChhhHhhHHHHHHHHH
Q 025273          138 --KGSSVVLISSIAGYQPQ-------------------------------------------SSMAMYGVTKTALLGLTK  172 (255)
Q Consensus       138 --~~~~iv~iss~~~~~~~-------------------------------------------~~~~~y~~sK~a~~~l~~  172 (255)
                        +.++||++||..+..+.                                           ++...|++||+|++.|++
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  248 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR  248 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence              45799999999876543                                           356789999999999999


Q ss_pred             HHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          173 ALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       173 ~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++.++.+ |+||+|+||+++|++.....                 ..++++.++.+++++.......+|..+
T Consensus       249 ~la~e~~~-i~v~~v~PG~v~T~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          249 VLANKIPK-FQVNCVCPGLVKTEMNYGIG-----------------NYTAEEGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHHCTT-SEEEEECCCSBCSGGGTTCC-----------------SBCHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred             HHHhhcCC-ceEEEecCCceecCCcCCCC-----------------CCCHHHHHHHHHHHHhCCCCCCCceEe
Confidence            99999865 99999999999999865321                 237999999998887655444455543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=6.1e-39  Score=263.63  Aligned_cols=220  Identities=23%  Similarity=0.250  Sum_probs=190.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGL-EGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++|++|||||+||||++++++|++ +|++|++++|+.+.++...+++...+.++.++++|+++.++++++++++.+.+++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999999 9999999999998888888888776778899999999999999999999999999


Q ss_pred             CCEEEEcCCCCCCCCCccCCC-HHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC---------------
Q 025273           90 IDVVVSNAAANPSVDSILQTK-ESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP---------------  153 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~---------------  153 (255)
                      +|+||||||.... .. ...+ .+++++.+++|+.+++++++.+++.|++.++||++||..++.+               
T Consensus        83 id~li~~Ag~~~~-~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           83 LDVLVNNAGIAFK-VA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             EEEEEECCCCCCC-TT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCEEEECCccccc-CC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence            9999999998652 22 3334 5889999999999999999999999987789999999876521               


Q ss_pred             --------------------------CCCChhhHhhHHHHHHHHHHHHHHhCC-----CeeEEEEeCCcccCCccccccC
Q 025273          154 --------------------------QSSMAMYGVTKTALLGLTKALAAEMAP-----DTRVNCVAPGFVPTHFAEYITS  202 (255)
Q Consensus       154 --------------------------~~~~~~y~~sK~a~~~l~~~la~e~~~-----~v~v~~v~pg~v~t~~~~~~~~  202 (255)
                                                ..+...|++||++++.|++.++.++.+     +|++++|+||+++|++...   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence                                      112378999999999999999999853     8999999999999998642   


Q ss_pred             ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC--CCCccccEEEeCCC
Q 025273          203 NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD--ASYITGETLVVAGG  250 (255)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~--~~~~~G~~i~~dgG  250 (255)
                                    .++.+|+|+++.++++++.+  ..+++|+.+. +++
T Consensus       238 --------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          238 --------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             --------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             --------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence                          23579999999999999855  3589999887 544

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=3.7e-40  Score=267.06  Aligned_cols=222  Identities=23%  Similarity=0.271  Sum_probs=158.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|++ |+.|++++|+.+.++.+.+     ..++.++++|+++.++ .+.+.+..+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   74 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNLD   74 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTCS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhcC
Confidence            35799999999999999999999987 9999999999877665443     2468889999998876 444445556678


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      ++|++|||||+.. ..++.+.+.++|++.+++|+.+++.+++.++|.|+ .+++||++||..+..+.++...|++||+|+
T Consensus        75 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  153 (245)
T 3e9n_A           75 HVDTLVHAAAVAR-DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHAL  153 (245)
T ss_dssp             CCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CHHHHHHHHHH
T ss_pred             CCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCchHHHHHHHHH
Confidence            9999999999876 56778889999999999999999999999999986 468999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.|+++++.|+.+ +|++|+|+||+++|++.........      ...+.+++.+|+|+|+.+.++++....   +++++
T Consensus       154 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~------~~~~~~~~~~p~dvA~~i~~l~~~~~~---~~~~~  224 (245)
T 3e9n_A          154 RGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQG------TNFRPEIYIEPKEIANAIRFVIDAGET---TQITN  224 (245)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHHHHHHTSCTT---EEEEE
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhh------cccccccCCCHHHHHHHHHHHHcCCCc---cceee
Confidence            9999999999988 9999999999999998765533221      122445678999999999999987653   44444


Q ss_pred             e
Q 025273          247 V  247 (255)
Q Consensus       247 ~  247 (255)
                      +
T Consensus       225 i  225 (245)
T 3e9n_A          225 V  225 (245)
T ss_dssp             E
T ss_pred             e
Confidence            4

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.9e-40  Score=270.42  Aligned_cols=217  Identities=24%  Similarity=0.330  Sum_probs=170.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||+||||++++++|+++|++|++++|+.+.++.          .   +++|+++.++++++++++   ++++|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~---~~~Dl~~~~~v~~~~~~~---~~~id~   65 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------D---LSTAEGRKQAIADVLAKC---SKGMDG   65 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------C---TTSHHHHHHHHHHHHTTC---TTCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------c---cccCCCCHHHHHHHHHHh---CCCCCE
Confidence            689999999999999999999999999999999764321          1   678999999998887743   378999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCcc-------------------
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGY-------------------  151 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~-------------------  151 (255)
                      ||||||.....        +.|++.+++|+.++++++++++|.|++  .++||++||..++                   
T Consensus        66 lv~~Ag~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           66 LVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEECCCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEECCCCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence            99999975411        128999999999999999999999964  4899999999887                   


Q ss_pred             ---------CCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHh-hcccCCCC
Q 025273          152 ---------QPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ-NTLLNRLG  220 (255)
Q Consensus       152 ---------~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~  220 (255)
                               .+.++...|++||++++.|++.++.|+.+ +|++++|+||+++|++................ ..+.+++.
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA  217 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCC
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCC
Confidence                     34456789999999999999999999977 99999999999999987654211111111111 34667889


Q ss_pred             CHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          221 TTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       221 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|+|+|+.+++++++...+++|+.+.+|||...
T Consensus       218 ~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            999999999999998888999999999999753

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=2.7e-39  Score=277.90  Aligned_cols=241  Identities=13%  Similarity=0.126  Sum_probs=198.9

Q ss_pred             CCCCEEEEEcCCCchHHH--HHHHHHHcCCeEEEEeCCchh------------HHHHHHHHHhcCCeEEEEEecCCCHHH
Q 025273           10 FQGKVAIVTASTQGIGFG--IAERLGLEGASVVVSSRKQKN------------VDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~--~a~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (255)
                      +.+|++|||||++|||++  +++.|+++|++|++++|+...            .+.+.+.+...+.++.+++||+++.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            679999999999999999  999999999999999997644            244555555667889999999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCC------------CCCCc---------------------cCCCHHHHHHHHHHHh
Q 025273           76 RKNLINQTIEKFGKIDVVVSNAAANP------------SVDSI---------------------LQTKESVLDKLWDINV  122 (255)
Q Consensus        76 v~~~~~~~~~~~g~~d~lv~~ag~~~------------~~~~~---------------------~~~~~~~~~~~~~~n~  122 (255)
                      ++++++++.+.+|++|+||||||...            ..+++                     .+.+.++|++++++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            99999999999999999999999741            12233                     4568999999999999


Q ss_pred             HHHH-HHHHHHhhc-c-cCCCeEEEEcccCccCCCCCC--hhhHhhHHHHHHHHHHHHHHhCC--CeeEEEEeCCcccCC
Q 025273          123 KSSI-LLLQDAAPH-L-QKGSSVVLISSIAGYQPQSSM--AMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTH  195 (255)
Q Consensus       123 ~~~~-~~~~~~~~~-~-~~~~~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~--~v~v~~v~pg~v~t~  195 (255)
                      .+.+ .+++.+.+. + .++++||++||.++..+.+.+  ..|++||+|+++|+++|+.|+.+  |||||+|+||+++|+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            9888 777777653 3 367899999999999888888  99999999999999999999976  899999999999999


Q ss_pred             ccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          196 FAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +...+...+......  ..++++.++++++++.+.+|+++  ...+|+.+.+|+|...|
T Consensus       298 ~s~~ip~~p~y~~~~--~~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r  352 (418)
T 4eue_A          298 ASAYIPTFPLYAAIL--YKVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLR  352 (418)
T ss_dssp             HHHTSTTHHHHHHHH--HHHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEE
T ss_pred             hhhcCCCCcHHHHHH--HHHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceee
Confidence            887664322211111  22566778999999999999977  55679988999876544

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.5e-39  Score=274.03  Aligned_cols=232  Identities=19%  Similarity=0.252  Sum_probs=183.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh------cCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA------RGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      ++|++|||||++|||++++++|+++|++|++++|+...++...+.+..      .+.++.++++|+++.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            378999999999999999999999999998888876554433333321      24689999999999999999999873


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHh
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                        ++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|+  +.++||++||..+..+.+....|++
T Consensus        81 --~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a  157 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (327)
T ss_dssp             --TSCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --cCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHH
Confidence              589999999999865 56778889999999999999999999999999985  5689999999999998889999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCCh---------hHHHH---HHh--hcccCCC-CCHHHHH
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---------GVRQT---IEQ--NTLLNRL-GTTRDMA  226 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~---------~~~~~---~~~--~~~~~~~-~~~~d~a  226 (255)
                      ||++++.|+++++.|+.+ +|+|++|+||+++|++........         .....   ...  ..+.+++ .+|+|+|
T Consensus       158 SK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA  237 (327)
T 1jtv_A          158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (327)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHH
Confidence            999999999999999988 999999999999999876543221         10000   000  0122333 4899999


Q ss_pred             HHHHHhcCCC---CCCccccEE
Q 025273          227 AAAAFLASDD---ASYITGETL  245 (255)
Q Consensus       227 ~~~~~l~s~~---~~~~~G~~i  245 (255)
                      +.++++++..   .++++|+.+
T Consensus       238 ~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          238 EVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHcCCCCCeEEEeCchH
Confidence            9999998753   456777643

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=3.1e-37  Score=255.37  Aligned_cols=216  Identities=22%  Similarity=0.279  Sum_probs=186.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++|++|||||+||||++++++|+++|++|++++|+.+.++.+.+++...+ .++.++++|+++.++++++++++.+.+
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999999998888877776554 389999999999999999999999999


Q ss_pred             CCCCEEEEc-CCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSN-AAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~-ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|++||| +|...  ..+.+.+.+++++.+++|+.|++.++++++|.|+ ..++||++||..+..+.++...|++||+
T Consensus       105 g~iD~li~naag~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  182 (286)
T 1xu9_A          105 GGLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKF  182 (286)
T ss_dssp             TSCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCccCCC--CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHHHH
Confidence            999999999 56543  3445678999999999999999999999999885 4689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHh--CC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          166 ALLGLTKALAAEM--AP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~--~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      +++.++++++.|+  .. +|+++.|+||+++|++........          ......+|+|+|+.++..+...
T Consensus       183 a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          183 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI----------VHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----------GGGGCBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc----------ccCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999998  34 999999999999998764321110          1123468999999998887554

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=1.9e-36  Score=238.21  Aligned_cols=198  Identities=20%  Similarity=0.208  Sum_probs=174.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||+|+||++++++|+ +|++|++++|+.+                 ++++|+++.++++++++++    +++|++
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~~d~v   62 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV----GKVDAI   62 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH----CCEEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh----CCCCEE
Confidence            79999999999999999999 9999999999864                 3789999999999988764    789999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHHH
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKA  173 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~  173 (255)
                      |||||... ..++.+.+.++|++.+++|+.+++++++++.+.|+++++||++||..+..+.++...|+++|++++.+++.
T Consensus        63 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~  141 (202)
T 3d7l_A           63 VSATGSAT-FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKS  141 (202)
T ss_dssp             EECCCCCC-CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCC-CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHH
Confidence            99999765 56778889999999999999999999999999987678999999999999999999999999999999999


Q ss_pred             HHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeC
Q 025273          174 LAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA  248 (255)
Q Consensus       174 la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      ++.|+..+++++.++||+++|++...           ....+..++.+++|+|+.++++++   ..++|+.+++|
T Consensus       142 ~~~e~~~gi~v~~v~pg~v~~~~~~~-----------~~~~~~~~~~~~~dva~~~~~~~~---~~~~G~~~~vd  202 (202)
T 3d7l_A          142 AAIEMPRGIRINTVSPNVLEESWDKL-----------EPFFEGFLPVPAAKVARAFEKSVF---GAQTGESYQVY  202 (202)
T ss_dssp             HTTSCSTTCEEEEEEECCBGGGHHHH-----------GGGSTTCCCBCHHHHHHHHHHHHH---SCCCSCEEEEC
T ss_pred             HHHHccCCeEEEEEecCccCCchhhh-----------hhhccccCCCCHHHHHHHHHHhhh---ccccCceEecC
Confidence            99999339999999999999987421           122345667899999999988873   45789999987

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.4e-36  Score=294.27  Aligned_cols=238  Identities=19%  Similarity=0.222  Sum_probs=196.1

Q ss_pred             ccCCCCEEEEEcCCCc-hHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHh----cCCeEEEEEecCCCHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQG-IGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKA----RGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         8 ~~l~~k~vlItGa~~g-iG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      ++++||++|||||++| ||++++++|+++|++|+++ +|+.+.++...+++..    .+.++.+++||+++.++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            3578999999999998 9999999999999999998 5777777666666532    25689999999999999999999


Q ss_pred             HHHHH-----hC-CCCEEEEcCCCCCCCC-CccCCC--HHHHHHHHHHHhHHHHHHHHHH--hhcccC--CCeEEEEccc
Q 025273           82 QTIEK-----FG-KIDVVVSNAAANPSVD-SILQTK--ESVLDKLWDINVKSSILLLQDA--APHLQK--GSSVVLISSI  148 (255)
Q Consensus        82 ~~~~~-----~g-~~d~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~~~~--~~~iv~iss~  148 (255)
                      ++.+.     +| ++|+||||||+.. .. ++.+.+  .++|++++++|+.+++.+++.+  ++.|++  +++||++||.
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~-~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~  829 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  829 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCC-CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred             HHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence            99988     66 9999999999875 34 778888  8999999999999999999988  687764  3699999999


Q ss_pred             CccCCCCCChhhHhhHHHHHHH-HHHHHHHhCCCeeEEEEeCCccc-CCccccccCChhHHHHHHhhcccCCCCCHHHHH
Q 025273          149 AGYQPQSSMAMYGVTKTALLGL-TKALAAEMAPDTRVNCVAPGFVP-THFAEYITSNDGVRQTIEQNTLLNRLGTTRDMA  226 (255)
Q Consensus       149 ~~~~~~~~~~~y~~sK~a~~~l-~~~la~e~~~~v~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a  226 (255)
                      .+..+  ....|++||+|+++| ++.++.++.+.|+||+|+||+++ |+|....   ..... .....+. +..+|+|+|
T Consensus       830 ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~---~~~~~-~~~~~pl-r~~sPEEVA  902 (1887)
T 2uv8_A          830 HGTFG--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN---NIIAE-GIEKMGV-RTFSQKEMA  902 (1887)
T ss_dssp             TTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C---CTTHH-HHHTTSC-CCEEHHHHH
T ss_pred             HhccC--CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc---hhHHH-HHHhcCC-CCCCHHHHH
Confidence            98876  678999999999999 99999998767999999999999 7876531   11111 1222333 566999999


Q ss_pred             HHHHHhcCCC-CCCccccEEEeC--CCccc
Q 025273          227 AAAAFLASDD-ASYITGETLVVA--GGMPS  253 (255)
Q Consensus       227 ~~~~~l~s~~-~~~~~G~~i~~d--gG~~~  253 (255)
                      ..++||+++. ..+++|+.+.+|  ||+..
T Consensus       903 ~avlfLaSd~~as~iTGq~I~VDVDGG~~~  932 (1887)
T 2uv8_A          903 FNLLGLLTPEVVELCQKSPVMADLNGGLQF  932 (1887)
T ss_dssp             HHHHGGGSHHHHHHHHHSCEEEEESCSTTT
T ss_pred             HHHHHHhCCCccccccCcEEEEECCCCeec
Confidence            9999999887 678999999875  99754

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.7e-37  Score=291.03  Aligned_cols=238  Identities=19%  Similarity=0.213  Sum_probs=196.7

Q ss_pred             ccCCCCEEEEEcCCCc-hHHHHHHHHHHcCCeEEEE-eCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQG-IGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         8 ~~l~~k~vlItGa~~g-iG~~~a~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      +++++|++|||||++| ||++++++|+++|++|+++ +|+.+.++...+++...    +.++.+++||+++.++++++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            4578999999999998 9999999999999999998 67776666666665322    5689999999999999999999


Q ss_pred             HHHHH-----hC-CCCEEEEcCCCCCCCC-CccCCC--HHHHHHHHHHHhHHHHHHHHHH--hhcccC--CCeEEEEccc
Q 025273           82 QTIEK-----FG-KIDVVVSNAAANPSVD-SILQTK--ESVLDKLWDINVKSSILLLQDA--APHLQK--GSSVVLISSI  148 (255)
Q Consensus        82 ~~~~~-----~g-~~d~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~~~~--~~~iv~iss~  148 (255)
                      ++.+.     +| ++|+||||||+.. .. ++.+.+  .++|++++++|+.+++.+++.+  .+.|++  +++||++||.
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~-~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSi  630 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  630 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCC-CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSC
T ss_pred             HHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEECh
Confidence            99988     77 8999999999865 34 677887  8999999999999999999998  788864  3799999999


Q ss_pred             CccCCCCCChhhHhhHHHHHHH-HHHHHHHhCCCeeEEEEeCCccc-CCccccccCChhHHHHHHhhcccCCCCCHHHHH
Q 025273          149 AGYQPQSSMAMYGVTKTALLGL-TKALAAEMAPDTRVNCVAPGFVP-THFAEYITSNDGVRQTIEQNTLLNRLGTTRDMA  226 (255)
Q Consensus       149 ~~~~~~~~~~~y~~sK~a~~~l-~~~la~e~~~~v~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a  226 (255)
                      .+..+  ....|++||+|+++| ++.++.++.+.|+||+|+||+++ |++........    ......+. +..+|+|+|
T Consensus       631 AG~~G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~~----~~l~~ipl-R~~sPEEVA  703 (1688)
T 2pff_A          631 HGTFG--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIA----EGIEKMGV-RTFSQKEMA  703 (1688)
T ss_dssp             TTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTCS----TTTSSSSC-CCCCCCTTH
T ss_pred             HhccC--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHHH----HHHHhCCC-CCCCHHHHH
Confidence            88876  678999999999999 78888888767999999999999 78754311000    11111232 456999999


Q ss_pred             HHHHHhcCCC-CCCccccEEEeC--CCccc
Q 025273          227 AAAAFLASDD-ASYITGETLVVA--GGMPS  253 (255)
Q Consensus       227 ~~~~~l~s~~-~~~~~G~~i~~d--gG~~~  253 (255)
                      ..++||+++. ..+++|+.+.+|  ||+..
T Consensus       704 ~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~  733 (1688)
T 2pff_A          704 FNLLGLLTPEVVELCQKSPVMADLNGGLQF  733 (1688)
T ss_dssp             HHHHHHTSTTHHHHHTTSCCCCCCSCSGGG
T ss_pred             HHHHHHhCCCccccccCcEEEEEcCCCeee
Confidence            9999999988 678999999876  99753

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=1.7e-35  Score=286.30  Aligned_cols=239  Identities=20%  Similarity=0.213  Sum_probs=195.6

Q ss_pred             ccCCCCEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHHHHh----cCCeEEEEEecCCCHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQG-IGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKA----RGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         8 ~~l~~k~vlItGa~~g-iG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      ++++||++|||||++| ||++++++|+++|++|++++ |+.+.++...+++..    .+.++.+++||+++.++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            3578999999999999 99999999999999999985 666666555555422    26789999999999999999999


Q ss_pred             HHHHH---hC-CCCEEEEcCCCCCCCCCccCCC--HHHHHHHHHHHhHHHHHHHHH--HhhcccC--CCeEEEEcccCcc
Q 025273           82 QTIEK---FG-KIDVVVSNAAANPSVDSILQTK--ESVLDKLWDINVKSSILLLQD--AAPHLQK--GSSVVLISSIAGY  151 (255)
Q Consensus        82 ~~~~~---~g-~~d~lv~~ag~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~--~~~~~~~--~~~iv~iss~~~~  151 (255)
                      ++.+.   +| ++|+||||||+.....++.+.+  .++|++++++|+.+++.+++.  +++.|++  .++||++||..+.
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT  807 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence            99988   88 9999999999875322778888  899999999999999999977  6677753  3799999999988


Q ss_pred             CCCCCChhhHhhHHHHHHHHHHHHHH-hCCCeeEEEEeCCccc-CCccccccCChhHHHHHHhhcccCCCCCHHHHHHHH
Q 025273          152 QPQSSMAMYGVTKTALLGLTKALAAE-MAPDTRVNCVAPGFVP-THFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA  229 (255)
Q Consensus       152 ~~~~~~~~y~~sK~a~~~l~~~la~e-~~~~v~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  229 (255)
                      .+  ....|++||+|+++|++.++.+ +.++|+||+|+||+++ |+|....    +.........+. +..+|+|++..+
T Consensus       808 ~g--g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~----~~~~~~~~~~pl-r~~sPeEVA~av  880 (1878)
T 2uv9_A          808 FG--NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSAN----NLVAEGVEKLGV-RTFSQQEMAFNL  880 (1878)
T ss_dssp             SS--CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHH----HHTHHHHHTTTC-CCBCHHHHHHHH
T ss_pred             cC--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccc----hhhHHHHHhcCC-CCCCHHHHHHHH
Confidence            76  4778999999999999877665 6657999999999999 9986431    111112222333 556999999999


Q ss_pred             HHhcCCCC-CCccccEEEe--CCCccc
Q 025273          230 AFLASDDA-SYITGETLVV--AGGMPS  253 (255)
Q Consensus       230 ~~l~s~~~-~~~~G~~i~~--dgG~~~  253 (255)
                      +||+++.. ++++|+.+.+  |||+..
T Consensus       881 lfLaSd~a~s~iTGq~I~VDVDGG~~~  907 (1878)
T 2uv9_A          881 LGLMAPAIVNLCQSDPVFADLNGGLQF  907 (1878)
T ss_dssp             HHHHSHHHHHHHTTSCEEEEESCSGGG
T ss_pred             HHHhCCcccccccCcEEEEEcCCCccc
Confidence            99998876 7899999887  599753

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=5e-36  Score=243.62  Aligned_cols=216  Identities=26%  Similarity=0.337  Sum_probs=176.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||+||||++++++|+++|++|++++|+.+.++.             .+++|+++.++++++++++   .+++|+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~d~   65 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVLDG   65 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCCSE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCccE
Confidence            689999999999999999999999999999998764321             1678999999988888754   368999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCC----------------
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQ----------------  154 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~----------------  154 (255)
                      +|||||....        .+.+++.+++|+.+++++++++.+.|++  .++||++||..++.+.                
T Consensus        66 vi~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           66 LVCCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA  137 (255)
T ss_dssp             EEECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred             EEECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence            9999997541        1227889999999999999999999864  3799999999887654                


Q ss_pred             ----------CCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhc--ccCCCCC
Q 025273          155 ----------SSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT--LLNRLGT  221 (255)
Q Consensus       155 ----------~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~  221 (255)
                                ++...|+.+|++++.+++.++.++.+ +++++.++||++.|++.......... .......  +.+++..
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  216 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY-GESTRRFVAPLGRGSE  216 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTT-HHHHHSCCCTTSSCBC
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhh-HHHHHHHHHHhcCCCC
Confidence                      46678999999999999999999866 89999999999999987544211111 1111111  5667899


Q ss_pred             HHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          222 TRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       222 ~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++|+++.+++++++...+++|+.+++|||...
T Consensus       217 ~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  248 (255)
T 2dkn_A          217 PREVAEAIAFLLGPQASFIHGSVLFVDGGMDA  248 (255)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHHHHHHhCCCcccceeeEEEecCCeEe
Confidence            99999999999988777889999999999764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=1.1e-34  Score=228.73  Aligned_cols=200  Identities=17%  Similarity=0.198  Sum_probs=169.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||+||||++++++|+++  +|++++|+.+.++.+.+++.    . .++++|+++.+++++++++    ++++|+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~----~~~id~   69 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG----A-RALPADLADELEAKALLEE----AGPLDL   69 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT----C-EECCCCTTSHHHHHHHHHH----HCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc----C-cEEEeeCCCHHHHHHHHHh----cCCCCE
Confidence            67999999999999999999998  99999999887777666553    1 7889999999999999886    689999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~  172 (255)
                      +|||||... ..++.+.+.++|++.+++|+.+++++++++..  .+.++||++||..++.+.++...|+++|++++.+++
T Consensus        70 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  146 (207)
T 2yut_A           70 LVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAFVLKHARF--QKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLE  146 (207)
T ss_dssp             EEECCCCCC-CBCSCC---CHHHHHHHHHHHHHHHHHHHCCE--EEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHH
T ss_pred             EEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh--cCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHH
Confidence            999999865 56677888899999999999999999998822  245799999999999888999999999999999999


Q ss_pred             HHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          173 ALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       173 ~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      .++.++.+ +++++.++||++.|++...            ...+.+++.+|+|+++.++++++.+..
T Consensus       147 ~~~~~~~~~gi~v~~v~pg~v~t~~~~~------------~~~~~~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          147 AARKELLREGVHLVLVRLPAVATGLWAP------------LGGPPKGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHTTTCEEEEECCCCBCSGGGGG------------GTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred             HHHHHHhhhCCEEEEEecCcccCCCccc------------cCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence            99999977 9999999999999987421            112456788999999999999977653

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=1.4e-32  Score=244.25  Aligned_cols=215  Identities=14%  Similarity=0.123  Sum_probs=181.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEE-eCCc-------------hhHHHHHHHHHhcCCeEEEEEecCCCHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVS-SRKQ-------------KNVDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~-~r~~-------------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (255)
                      +++++|||||+||||.+++++|+++|++ |+++ +|+.             +.++.+.+++...+.++.+++||+++.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5799999999999999999999999998 7777 8883             45566777777778899999999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccC
Q 025273           76 RKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQ  152 (255)
Q Consensus        76 v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~  152 (255)
                      ++++++++. .++++|+||||||+.. ...+.+.+.++|++++++|+.|++++.+.+.+.+++   .++||++||..+..
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~-~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~  407 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW  407 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence            999999998 7899999999999876 578889999999999999999999999999999863   57999999999999


Q ss_pred             CCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHH
Q 025273          153 PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF  231 (255)
Q Consensus       153 ~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  231 (255)
                      +.+++..|+++|+++++|+    .++.. |+++++|+||+++|+|...    ......+... . -...+|+++++.+.+
T Consensus       408 g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~----~~~~~~~~~~-g-~~~l~pee~a~~l~~  477 (525)
T 3qp9_A          408 GGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTE----GATGERLRRL-G-LRPLAPATALTALDT  477 (525)
T ss_dssp             CCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGS----SHHHHHHHHT-T-BCCBCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccc----hhhHHHHHhc-C-CCCCCHHHHHHHHHH
Confidence            9999999999999999875    45555 9999999999999998742    1222222221 1 134699999999999


Q ss_pred             hcCCCC
Q 025273          232 LASDDA  237 (255)
Q Consensus       232 l~s~~~  237 (255)
                      +++...
T Consensus       478 ~l~~~~  483 (525)
T 3qp9_A          478 ALGHGD  483 (525)
T ss_dssp             HHHHTC
T ss_pred             HHhCCC
Confidence            987654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=100.00  E-value=6.5e-33  Score=279.76  Aligned_cols=240  Identities=17%  Similarity=0.165  Sum_probs=182.9

Q ss_pred             cccCCCCEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEeCCchh-----HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQG-IGFGIAERLGLEGASVVVSSRKQKN-----VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~g-iG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      ...++||++|||||++| ||+++++.|+++|++|++++|+.+.     ++.+.+++...+.++..++||+++.+++++++
T Consensus      2131 ~~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2131 XXXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             TCCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Confidence            34589999999999999 9999999999999999999999776     56666666555778999999999999999999


Q ss_pred             HHHHH----HhCCCCEEEEcCCCC----CCCCCccCCCHH----HHHHHHHHHhHHHHHHHHHHhhcccCCC------eE
Q 025273           81 NQTIE----KFGKIDVVVSNAAAN----PSVDSILQTKES----VLDKLWDINVKSSILLLQDAAPHLQKGS------SV  142 (255)
Q Consensus        81 ~~~~~----~~g~~d~lv~~ag~~----~~~~~~~~~~~~----~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~i  142 (255)
                      +++.+    .+|++|+||||||+.    .......+.+.+    .++..+++|+.+.+.+++.+.+.|+..+      .+
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii 2290 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVV 2290 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence            99998    889999999999972    111222222333    3455599999999999999999886221      23


Q ss_pred             EEEcccCccCCCCCChhhHhhHHHHHHHHHHHHHH--hCCCeeEEEEeCCccc-CCccccccCChhHHHHHHhhcccCCC
Q 025273          143 VLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE--MAPDTRVNCVAPGFVP-THFAEYITSNDGVRQTIEQNTLLNRL  219 (255)
Q Consensus       143 v~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e--~~~~v~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (255)
                      ++.|+..+.  ......|++||+|+++|+|+++.|  ++++|++|+++||+++ |++......   . .......+. +.
T Consensus      2291 ~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~---~-~~~~~~~~~-r~ 2363 (3089)
T 3zen_D         2291 LPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDA---I-VSAVEEAGV-TT 2363 (3089)
T ss_dssp             EEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTT---T-HHHHGGGSC-BC
T ss_pred             EECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchh---H-HHHHHhcCC-CC
Confidence            333433332  234568999999999999999999  7779999999999999 666532211   1 112222333 34


Q ss_pred             CCHHHHHHHHHHhcCCCCCC-ccccEEEeC--CCccc
Q 025273          220 GTTRDMAAAAAFLASDDASY-ITGETLVVA--GGMPS  253 (255)
Q Consensus       220 ~~~~d~a~~~~~l~s~~~~~-~~G~~i~~d--gG~~~  253 (255)
                      .+|+|+|..++||+|+..+. .+|+.+.+|  ||+..
T Consensus      2364 ~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2364 YTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             EEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             CCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence            49999999999999988665 456766666  99854

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=2.1e-30  Score=227.92  Aligned_cols=215  Identities=20%  Similarity=0.166  Sum_probs=176.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCc---hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ---KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|||||+||||++++++|+++|+ .|++++|+.   +..+.+.+++...+.++.+++||+++.++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            58999999999999999999999999 699999974   3456777778878899999999999999999999988766 


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +++|++|||||+.....++.+.+.++|++++++|+.|++++.+.+.+..  .++||++||..+..+.+++..|+++|+++
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~--~~~iV~~SS~a~~~g~~g~~~YaAaKa~l  395 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD--LDAFVLFSSGAAVWGSGGQPGYAAANAYL  395 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC--CSEEEEEEEHHHHTTCTTCHHHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC--CCEEEEEeChHhcCCCCCcHHHHHHHHHH
Confidence            6899999999987446788999999999999999999999999888764  46999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +.|++.++..   |+++++|+||++.++.+...   ......+.....  ...+|++.+..+.++++...
T Consensus       396 dala~~~~~~---Gi~v~sV~pG~w~~~gm~~~---~~~~~~l~~~g~--~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          396 DALAEHRRSL---GLTASSVAWGTWGEVGMATD---PEVHDRLVRQGV--LAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHT---TCCCEEEEECEESSSCC---------CHHHHHTTE--EEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhc---CCeEEEEECCcccCCccccC---hHHHHHHHhcCC--CCCCHHHHHHHHHHHHcCCC
Confidence            9999865532   89999999999877544321   111111211111  13489999999988886654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=3.6e-30  Score=238.54  Aligned_cols=215  Identities=20%  Similarity=0.212  Sum_probs=175.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHH-HcCCe-EEEEeCC---chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLG-LEGAS-VVVSSRK---QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~-~~G~~-V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .+|++|||||++|||++++++|+ ++|++ |++++|+   .+.++.+.+++...+.++.+++||+++.++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            48999999999999999999999 79995 9999999   5566777888888889999999999999999999999877


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      .+ ++|+||||||+.. ...+.+.+.++|++.+++|+.|++++.+++.+.|    +||++||.++..+.+++..|+++|+
T Consensus       609 ~~-~id~lVnnAGv~~-~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l----~iV~~SS~ag~~g~~g~~~YaAaka  682 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLD-DGVSESLTVERLDQVLRPKVDGARNLLELIDPDV----ALVLFSSVSGVLGSGGQGNYAAANS  682 (795)
T ss_dssp             TS-CEEEEEECCCCCC-CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS----EEEEEEETHHHHTCSSCHHHHHHHH
T ss_pred             hC-CCEEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC----EEEEEccHHhcCCCCCCHHHHHHHH
Confidence            76 8999999999876 5788999999999999999999999999998877    8999999999999999999999996


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      .+    ++|++++.+ ||++|+|+||++.|+....... +.....+ ...... ..++++....+...+..+..
T Consensus       683 ~~----~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~-~~~~~~~-~~~g~~-~l~~~e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          683 FL----DALAQQRQSRGLPTRSLAWGPWAEHGMASTLR-EAEQDRL-ARSGLL-PISTEEGLSQFDAACGGAHT  749 (795)
T ss_dssp             HH----HHHHHHHHHTTCCEEEEEECCCSCCCHHHHHH-HHHHHHH-HHTTBC-CCCHHHHHHHHHHHHTSSCS
T ss_pred             HH----HHHHHHHHHcCCeEEEEECCeECcchhhcccc-HHHHHHH-HhcCCC-CCCHHHHHHHHHHHHhCCCc
Confidence            54    455555544 9999999999999875432211 1111122 222333 34777777777666655443

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.96  E-value=1.9e-28  Score=215.99  Aligned_cols=213  Identities=19%  Similarity=0.149  Sum_probs=172.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCch---hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQK---NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++++|||||+||||++++++|+++|+. |++++|+..   .++.+.+++...+.++.++.||+++.++++++++++ ..
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            4799999999999999999999999996 999999875   456666777777889999999999999999999988 55


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++++|++|||||+.. ...+.+.+.+++++++++|+.|++++.+.+.+.  +.++||++||..+..+.++...|+++|++
T Consensus       304 ~g~ld~VIh~AG~~~-~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~V~~SS~a~~~g~~g~~~Yaaaka~  380 (486)
T 2fr1_A          304 DVPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAFGAPGLGGYAPGNAY  380 (486)
T ss_dssp             TSCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTCCTTCTTTHHHHHH
T ss_pred             cCCCcEEEECCccCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--CCCEEEEEcChHhcCCCCCCHHHHHHHHH
Confidence            689999999999876 567788999999999999999999999988653  45799999999998888999999999999


Q ss_pred             HHHHHHHHHHHhCCCeeEEEEeCCcccCC-ccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTH-FAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       167 ~~~l~~~la~e~~~~v~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      ++.|++.++..   |+++++|+||++.++ |....     ....+..  ..-...+++|++..+..++....
T Consensus       381 l~~la~~~~~~---gi~v~~i~pG~~~~~gm~~~~-----~~~~~~~--~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          381 LDGLAQQRRSD---GLPATAVAWGTWAGSGMAEGP-----VADRFRR--HGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             HHHHHHHHHHT---TCCCEEEEECCBC-----------------CTT--TTEECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhc---CCeEEEEECCeeCCCcccchh-----HHHHHHh--cCCCCCCHHHHHHHHHHHHhCCC
Confidence            99998765532   899999999999886 33211     0111110  01125689999999998886554

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=8.4e-28  Score=196.82  Aligned_cols=195  Identities=15%  Similarity=0.136  Sum_probs=155.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++|+||||||+|+||++++++|+++|++|++++|+....+         +.++.++++|+++.++++++++       ++
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   65 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------GC   65 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------CC
Confidence            3589999999999999999999999999999999976532         4588999999999999998876       79


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc------------CCCCCCh
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY------------QPQSSMA  158 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~------------~~~~~~~  158 (255)
                      |+||||||...         .+.|++.+++|+.|++++++++.+.  +.++||++||..++            .+..+..
T Consensus        66 D~vi~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~  134 (267)
T 3rft_A           66 DGIVHLGGISV---------EKPFEQILQGNIIGLYNLYEAARAH--GQPRIVFASSNHTIGYYPQTERLGPDVPARPDG  134 (267)
T ss_dssp             SEEEECCSCCS---------CCCHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCS
T ss_pred             CEEEECCCCcC---------cCCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCC
Confidence            99999999742         2237889999999999999999654  45699999998876            4456678


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      .|+.||++.+.+++.++.++  +++++.|+||.+.+++..    ....          ..+..++|++..+..++..+..
T Consensus       135 ~Y~~sK~~~e~~~~~~a~~~--g~~~~~vr~~~v~~~~~~----~~~~----------~~~~~~~d~a~~~~~~~~~~~~  198 (267)
T 3rft_A          135 LYGVSKCFGENLARMYFDKF--GQETALVRIGSCTPEPNN----YRML----------STWFSHDDFVSLIEAVFRAPVL  198 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH--CCCEEEEEECBCSSSCCS----TTHH----------HHBCCHHHHHHHHHHHHHCSCC
T ss_pred             hHHHHHHHHHHHHHHHHHHh--CCeEEEEEeecccCCCCC----CCce----------eeEEcHHHHHHHHHHHHhCCCC
Confidence            99999999999999999988  678888999888876432    1111          1246899999988888766532


Q ss_pred             CccccEEEeCCC
Q 025273          239 YITGETLVVAGG  250 (255)
Q Consensus       239 ~~~G~~i~~dgG  250 (255)
                        .+.++.+.++
T Consensus       199 --~~~~~~~~s~  208 (267)
T 3rft_A          199 --GCPVVWGASA  208 (267)
T ss_dssp             --CSCEEEECCC
T ss_pred             --CceEEEEeCC
Confidence              2344555444

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=1.4e-28  Score=197.86  Aligned_cols=204  Identities=22%  Similarity=0.204  Sum_probs=158.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeE-EEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV-IGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.+.++.+.+      ..+ .++++|++  +       .+.+.
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~--~-------~~~~~   81 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE--E-------DFSHA   81 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT--S-------CCGGG
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH--H-------HHHHH
Confidence            45889999999999999999999999999999999999887665432      256 78899999  2       33344


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC---CCChhhHhh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ---SSMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~---~~~~~y~~s  163 (255)
                      ++++|+||||||....         +++++.+++|+.+++++++++.+.  ..++||++||..+..+.   .+...|+.+
T Consensus        82 ~~~~D~vi~~ag~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~Y~~s  150 (236)
T 3e8x_A           82 FASIDAVVFAAGSGPH---------TGADKTILIDLWGAIKTIQEAEKR--GIKRFIMVSSVGTVDPDQGPMNMRHYLVA  150 (236)
T ss_dssp             GTTCSEEEECCCCCTT---------SCHHHHHHTTTHHHHHHHHHHHHH--TCCEEEEECCTTCSCGGGSCGGGHHHHHH
T ss_pred             HcCCCEEEECCCCCCC---------CCccccchhhHHHHHHHHHHHHHc--CCCEEEEEecCCCCCCCCChhhhhhHHHH
Confidence            5689999999997541         347889999999999999998654  35699999998776654   467899999


Q ss_pred             HHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      |++++.+++    +  .+++++.++||++.++..........      .......+..++|+|+.+.++++.+.  ..|+
T Consensus       151 K~~~e~~~~----~--~gi~~~~lrpg~v~~~~~~~~~~~~~------~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~  216 (236)
T 3e8x_A          151 KRLADDELK----R--SSLDYTIVRPGPLSNEESTGKVTVSP------HFSEITRSITRHDVAKVIAELVDQQH--TIGK  216 (236)
T ss_dssp             HHHHHHHHH----H--SSSEEEEEEECSEECSCCCSEEEEES------SCSCCCCCEEHHHHHHHHHHHTTCGG--GTTE
T ss_pred             HHHHHHHHH----H--CCCCEEEEeCCcccCCCCCCeEEecc------CCCcccCcEeHHHHHHHHHHHhcCcc--ccCC
Confidence            999999876    2  38999999999999986432211100      11123557789999999999997654  6799


Q ss_pred             EEEeCCCc
Q 025273          244 TLVVAGGM  251 (255)
Q Consensus       244 ~i~~dgG~  251 (255)
                      .+++++|.
T Consensus       217 ~~~v~~~~  224 (236)
T 3e8x_A          217 TFEVLNGD  224 (236)
T ss_dssp             EEEEEECS
T ss_pred             eEEEeCCC
Confidence            99998884

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.96  E-value=2e-27  Score=210.28  Aligned_cols=210  Identities=21%  Similarity=0.220  Sum_probs=172.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCch---hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQK---NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++++|||||+||||++++++|+++|+ +|++++|+..   .++.+.+++...+.++.++.||+++.+++++++++    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            479999999999999999999999999 5999999864   45666777777788999999999999999999876    


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                       +++|+||||||+.. ...+.+.+.+++++++++|+.|++++.+.+.+. ++.++||++||..+..+.+++..|+++|++
T Consensus       334 -~~ld~VVh~AGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~  410 (511)
T 2z5l_A          334 -YPPNAVFHTAGILD-DAVIDTLSPESFETVRGAKVCGAELLHQLTADI-KGLDAFVLFSSVTGTWGNAGQGAYAAANAA  410 (511)
T ss_dssp             -SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-TTCCCEEEEEEGGGTTCCTTBHHHHHHHHH
T ss_pred             -CCCcEEEECCcccC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCEEEEEeCHHhcCCCCCCHHHHHHHHH
Confidence             68999999999876 567788899999999999999999999876543 345799999999999899999999999999


Q ss_pred             HHHHHHHHHHHhCCCeeEEEEeCCcc-cCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          167 LLGLTKALAAEMAPDTRVNCVAPGFV-PTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       167 ~~~l~~~la~e~~~~v~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      ++.|++.++.   .++++++|+||++ +|+|....    . ...+...  .-...+++++++.+...+....
T Consensus       411 ld~la~~~~~---~gi~v~sv~pG~~~~tgm~~~~----~-~~~~~~~--g~~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          411 LDALAERRRA---AGLPATSVAWGLWGGGGMAAGA----G-EESLSRR--GLRAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             HHHHHHHHHT---TTCCCEEEEECCBCSTTCCCCH----H-HHHHHHH--TBCCBCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHH---cCCcEEEEECCcccCCcccccc----c-HHHHHhc--CCCCCCHHHHHHHHHHHHhCCC
Confidence            9999987542   2899999999999 77776432    1 1111111  1135699999999998886543

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.95  E-value=9.6e-28  Score=201.17  Aligned_cols=219  Identities=17%  Similarity=0.142  Sum_probs=166.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ..+-++||||||+|+||++++++|+++|++|++++|+... +.    +     ++.++.+|+++.++++++++.     +
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~-----~   73 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD-----I   73 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH-----H
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh-----c
Confidence            3456899999999999999999999999999999998764 21    1     678889999999999988875     2


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-------------CC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-------------QS  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-------------~~  155 (255)
                      ++|+|||+||....     ..+.+++++.+++|+.++.++++++ +.+...+++|++||...+.+             ..
T Consensus        74 ~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~  147 (321)
T 2pk3_A           74 KPDYIFHLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSNLDCRILTIGSSEEYGMILPEESPVSEENQLR  147 (321)
T ss_dssp             CCSEEEECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCB
T ss_pred             CCCEEEEcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCC
Confidence            79999999997531     1122357889999999999999998 55544679999999876543             24


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHh---h-----------cccCCCCC
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ---N-----------TLLNRLGT  221 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~  221 (255)
                      +...|+.+|.+.+.+++.++.++  +++++.+.|+.+.++..........+......   .           .....++.
T Consensus       148 ~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~  225 (321)
T 2pk3_A          148 PMSPYGVSKASVGMLARQYVKAY--GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTD  225 (321)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHc--CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEE
Confidence            67789999999999999999887  79999999999998865421101112222211   1           11223568


Q ss_pred             HHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          222 TRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       222 ~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++|++++++++++..   .+|+++++++|...
T Consensus       226 v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~  254 (321)
T 2pk3_A          226 VRDIVQAYWLLSQYG---KTGDVYNVCSGIGT  254 (321)
T ss_dssp             HHHHHHHHHHHHHHC---CTTCEEEESCSCEE
T ss_pred             HHHHHHHHHHHHhCC---CCCCeEEeCCCCCe
Confidence            999999999998654   46899999998654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.95  E-value=7.4e-27  Score=197.65  Aligned_cols=224  Identities=15%  Similarity=0.053  Sum_probs=168.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |+||||||+|+||++++++|+++|++|++++|+. ...+...+.+.. ..++.++++|+++.++++++++..     ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPD   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc-----CCC
Confidence            5799999999999999999999999999999853 232333334433 346888999999999999888753     699


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-------------------
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-------------------  152 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-------------------  152 (255)
                      +|||+||....     +.+.+++++.+++|+.++.++++++.+.+.+ ++||++||...+.                   
T Consensus        76 ~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~-~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~  149 (347)
T 1orr_A           76 SCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYNSN-CNIIYSSTNKVYGDLEQYKYNETETRYTCVDK  149 (347)
T ss_dssp             EEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEEEEEGGGGTTCTTSCEEECSSCEEETTC
T ss_pred             EEEECCcccCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-ceEEEeccHHHhCCCCcCCccccccccccccc
Confidence            99999996431     1234567889999999999999999887642 5999999976542                   


Q ss_pred             --------CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC---hhHHHHHHhhc-----cc
Q 025273          153 --------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN---DGVRQTIEQNT-----LL  216 (255)
Q Consensus       153 --------~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~-----~~  216 (255)
                              +..+...|+.+|.+.+.+++.++.++  +++++.++||.+.++........   ..+........     +.
T Consensus       150 ~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (347)
T 1orr_A          150 PNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF--GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPF  227 (347)
T ss_dssp             TTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCE
T ss_pred             ccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh--CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCe
Confidence                    23456789999999999999999987  79999999999999865322111   11111111111     11


Q ss_pred             C---------CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCc
Q 025273          217 N---------RLGTTRDMAAAAAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       217 ~---------~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      .         .+..++|+|++++++++. ....+|+++++++|.
T Consensus       228 ~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          228 TISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             EEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             EEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence            1         256899999999998853 234679999999986

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.95  E-value=2.7e-27  Score=199.84  Aligned_cols=229  Identities=16%  Similarity=0.097  Sum_probs=170.7

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEE-EecCCCHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGV-VCHVSNGQQRKNLIN   81 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~-~~Dv~~~~~v~~~~~   81 (255)
                      .+|...+++|+||||||+|+||++++++|+++|++|++++|+.+..+.+.+.+... +.++.++ ++|+++.++++++++
T Consensus         3 ~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   82 (342)
T 1y1p_A            3 IDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK   82 (342)
T ss_dssp             STTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT
T ss_pred             CCcccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc
Confidence            34555578999999999999999999999999999999999987766665554332 3578888 899999988777654


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-CC------
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-PQ------  154 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-~~------  154 (255)
                             ++|+|||+||.....        +++++.+++|+.++.++++++.+.. ..+++|++||..++. +.      
T Consensus        83 -------~~d~vih~A~~~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~~  146 (342)
T 1y1p_A           83 -------GAAGVAHIASVVSFS--------NKYDEVVTPAIGGTLNALRAAAATP-SVKRFVLTSSTVSALIPKPNVEGI  146 (342)
T ss_dssp             -------TCSEEEECCCCCSCC--------SCHHHHHHHHHHHHHHHHHHHHTCT-TCCEEEEECCGGGTCCCCTTCCCC
T ss_pred             -------CCCEEEEeCCCCCCC--------CCHHHHHHHHHHHHHHHHHHHHhCC-CCcEEEEeccHHHhcCCCCCCCCc
Confidence                   799999999975421        1356789999999999999987532 346999999987652 21      


Q ss_pred             ------------------------CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC---hhHH
Q 025273          155 ------------------------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN---DGVR  207 (255)
Q Consensus       155 ------------------------~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~---~~~~  207 (255)
                                              .+...|+.+|.+.+.+++.++.++.++++++.++||.+.++........   ..+.
T Consensus       147 ~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~  226 (342)
T 1y1p_A          147 YLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWM  226 (342)
T ss_dssp             EECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHH
T ss_pred             ccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHH
Confidence                                    1235799999999999999999987789999999999999875432111   1111


Q ss_pred             HHHHhh--------cccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          208 QTIEQN--------TLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       208 ~~~~~~--------~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ......        .....++.++|+|+++++++...  ..+|+.+..+|+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~~g~~~~~~g~  275 (342)
T 1y1p_A          227 MSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAG  275 (342)
T ss_dssp             HHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCE
T ss_pred             HHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc--ccCCceEEEeCC
Confidence            111111        12334678999999998888543  245776666654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.95  E-value=5.4e-28  Score=194.89  Aligned_cols=198  Identities=13%  Similarity=0.054  Sum_probs=150.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++|++|||||+|+||++++++|+++|+  +|++++|+.+.++...      ..++.++++|+++.++++++++     
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~-----   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ-----   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS-----
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc-----
Confidence            35689999999999999999999999999  9999999976543211      1257788999999988877654     


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                        ++|++|||||...        ..+.+++.+++|+.++.++++++.+.  ..++||++||..++.+  +...|+.+|++
T Consensus        84 --~~d~vi~~ag~~~--------~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~iv~~SS~~~~~~--~~~~Y~~sK~~  149 (242)
T 2bka_A           84 --GHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAKAG--GCKHFNLLSSKGADKS--SNFLYLQVKGE  149 (242)
T ss_dssp             --SCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred             --CCCEEEECCCccc--------ccCCcccceeeeHHHHHHHHHHHHHC--CCCEEEEEccCcCCCC--CcchHHHHHHH
Confidence              7999999999642        12346889999999999999887653  3469999999887653  45689999999


Q ss_pred             HHHHHHHHHHHhCCCe-eEEEEeCCcccCCccccccCChhHHHHHHhhcc----cCCCCCHHHHHHHHHHhcCCCCC
Q 025273          167 LLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL----LNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       167 ~~~l~~~la~e~~~~v-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      ++.+++.+      ++ +++.|+||++.|+...... ............+    .++++.++|+|+.+++++++...
T Consensus       150 ~e~~~~~~------~~~~~~~vrpg~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  219 (242)
T 2bka_A          150 VEAKVEEL------KFDRYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD  219 (242)
T ss_dssp             HHHHHHTT------CCSEEEEEECCEEECTTGGGSH-HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred             HHHHHHhc------CCCCeEEEcCceecCCCCCCcH-HHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc
Confidence            99998753      45 7999999999998653211 0111111111222    35678999999999999987654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.95  E-value=1e-26  Score=197.05  Aligned_cols=217  Identities=14%  Similarity=0.109  Sum_probs=169.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHc-CC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLE-GA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++|+||||||+|+||++++++|+++ |+ +|++++|+....+.+.+++.  ..++.++.+|+++.++++++++     
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~-----   90 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE-----   90 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT-----
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh-----
Confidence            378999999999999999999999999 98 89999999887766665553  3578899999999999887765     


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                        ++|+|||+||....  +   .......+.+++|+.|+.++++++.+..  .+++|++||..+..|   ...|+.+|++
T Consensus        91 --~~D~Vih~Aa~~~~--~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~~--v~~~V~~SS~~~~~p---~~~Y~~sK~~  158 (344)
T 2gn4_A           91 --GVDICIHAAALKHV--P---IAEYNPLECIKTNIMGASNVINACLKNA--ISQVIALSTDKAANP---INLYGATKLC  158 (344)
T ss_dssp             --TCSEEEECCCCCCH--H---HHHHSHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGSSC---CSHHHHHHHH
T ss_pred             --cCCEEEECCCCCCC--C---chhcCHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEecCCccCCC---ccHHHHHHHH
Confidence              79999999997431  1   1123356789999999999999998763  469999999876544   5789999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhc---------ccCCCCCHHHHHHHHHHhcCCC
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT---------LLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      .+.+++.++.++.+ +++++.++||.+.++.....   +.+........         ....+..++|+++.+++++...
T Consensus       159 ~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i---~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~  235 (344)
T 2gn4_A          159 SDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVV---PFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRM  235 (344)
T ss_dssp             HHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHH---HHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHH---HHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhc
Confidence            99999999988776 89999999999998753211   11111111111         1123578999999999988654


Q ss_pred             CCCccccEEEeCCC
Q 025273          237 ASYITGETLVVAGG  250 (255)
Q Consensus       237 ~~~~~G~~i~~dgG  250 (255)
                         ..|++++++++
T Consensus       236 ---~~g~~~~~~~~  246 (344)
T 2gn4_A          236 ---HGGEIFVPKIP  246 (344)
T ss_dssp             ---CSSCEEEECCC
T ss_pred             ---cCCCEEecCCC
Confidence               25888888776

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.95  E-value=8.6e-27  Score=196.94  Aligned_cols=231  Identities=16%  Similarity=0.082  Sum_probs=169.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .+|+||||||+|+||++++++|+++|++|++++|+.+..+...+.+... +.++.++++|+++.+++++++++     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            3689999999999999999999999999999999877665555555433 56788999999999999998875     37


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------CCCCCh
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMA  158 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~  158 (255)
                      +|++||+||....     ....+..++.+++|+.+++++++++...  ..++||++||...+.           +..+..
T Consensus        79 ~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~  151 (341)
T 3enk_A           79 ITAAIHFAALKAV-----GESVAKPIEYYRNNLDSLLSLLRVMRER--AVKRIVFSSSATVYGVPERSPIDETFPLSATN  151 (341)
T ss_dssp             CCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSS
T ss_pred             CcEEEECcccccc-----CccccChHHHHHHHHHHHHHHHHHHHhC--CCCEEEEEecceEecCCCCCCCCCCCCCCCCC
Confidence            9999999997541     1123345678899999999998877653  346999999977652           233457


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC------ChhHH---HH-HHhh-c-------------
Q 025273          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS------NDGVR---QT-IEQN-T-------------  214 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~------~~~~~---~~-~~~~-~-------------  214 (255)
                      .|+.+|.+.+.+++.++.++. +++++.+.|+.+..+.......      ...+.   .. .... .             
T Consensus       152 ~Y~~sK~~~e~~~~~~~~~~~-~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  230 (341)
T 3enk_A          152 PYGQTKLMAEQILRDVEAADP-SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPD  230 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCT-TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTT
T ss_pred             hhHHHHHHHHHHHHHHhhcCC-CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCC
Confidence            899999999999999999874 5899999999988764321111      01111   11 1110 1             


Q ss_pred             --ccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          215 --LLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       215 --~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                        ....+..++|+++++++++........|+++++.+|...+
T Consensus       231 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s  272 (341)
T 3enk_A          231 GTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYS  272 (341)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEE
T ss_pred             CCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCcee
Confidence              1123556799999999888642122468999999987643

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.95  E-value=5.7e-27  Score=197.66  Aligned_cols=222  Identities=15%  Similarity=0.027  Sum_probs=164.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCch--hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++||||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +++. ...++.++++|+++.+++++++.      
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELVR------   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHH------
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHhh------
Confidence            4679999999999999999999997  89999998742  11111 1111 13578899999999999888773      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------CCCC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSS  156 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~  156 (255)
                       ++|++||+||...     .+.+.+++++.+++|+.++.++++++.+. ...++||++||...+.           +..+
T Consensus        75 -~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~  147 (336)
T 2hun_A           75 -KVDGVVHLAAESH-----VDRSISSPEIFLHSNVIGTYTLLESIRRE-NPEVRFVHVSTDEVYGDILKGSFTENDRLMP  147 (336)
T ss_dssp             -TCSEEEECCCCCC-----HHHHHHCTHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCCCSSSCBCTTBCCCC
T ss_pred             -CCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEeccHHHHCCCCCCCcCCCCCCCC
Confidence             7999999999743     11234557789999999999999999876 3346999999976432           3456


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhc---------ccCCCCCHHHHHH
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT---------LLNRLGTTRDMAA  227 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~d~a~  227 (255)
                      ...|+.+|++.+.+++.++.++  +++++.++|+.+.++..........+........         ....+..++|+++
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  225 (336)
T 2hun_A          148 SSPYSATKAASDMLVLGWTRTY--NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVR  225 (336)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHT--TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHh--CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHH
Confidence            7789999999999999999887  7999999999999986421100011111221111         1224567899999


Q ss_pred             HHHHhcCCCCCCccccEEEeCCCccc
Q 025273          228 AAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++++++..   .+|+++++++|...
T Consensus       226 ~~~~~~~~~---~~g~~~~v~~~~~~  248 (336)
T 2hun_A          226 AIELVLLKG---ESREIYNISAGEEK  248 (336)
T ss_dssp             HHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             HHHHHHhCC---CCCCEEEeCCCCcc
Confidence            999988643   36899999998754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.95  E-value=4.7e-27  Score=200.08  Aligned_cols=223  Identities=13%  Similarity=0.059  Sum_probs=167.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCch--hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQK--NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +||||||+|+||++++++|+++ |++|++++|+..  ..+.+ +++. ...++.++++|+++.+++++++++.     ++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhhc-----CC
Confidence            5999999999999999999998 799999998752  22221 1111 1457889999999999999888753     79


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-------CCeEEEEcccCccC-----------
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------GSSVVLISSIAGYQ-----------  152 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~iss~~~~~-----------  152 (255)
                      |+|||+||...     .+.+.+++++.+++|+.+++++++++.+.|++       +++||++||...+.           
T Consensus        75 d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           75 DAVMHLAAESH-----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             SEEEECCSCCC-----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             CEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            99999999743     12234567889999999999999999988643       24999999975432           


Q ss_pred             ----------CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhc--------
Q 025273          153 ----------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT--------  214 (255)
Q Consensus       153 ----------~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--------  214 (255)
                                +..+...|+.+|++.+.+++.++.++  +++++.++||.+.++..........+........        
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY--GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTS
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh--CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCC
Confidence                      23456789999999999999999988  7899999999999987531100011222222211        


Q ss_pred             -ccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          215 -LLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       215 -~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                       ....++.++|++++++++++..   .+|+++++++|...
T Consensus       228 ~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  264 (361)
T 1kew_A          228 DQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             ceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCee
Confidence             1224567999999999998653   37999999998754

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.94  E-value=4e-27  Score=199.04  Aligned_cols=224  Identities=15%  Similarity=0.057  Sum_probs=163.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHH-HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE-AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+..+. ..+.+. ...++.++++|+++.++++++++.+     +
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   75 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV-----Q   75 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence            47899999999999999999999999999999998765321 111111 1347888999999999999988876     7


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-----------CCCCCCh
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQSSMA  158 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-----------~~~~~~~  158 (255)
                      +|++||+||...     .+.+.+++++.+++|+.+++++++++.+. ...+++|++||...+           .+..+..
T Consensus        76 ~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~  149 (345)
T 2z1m_A           76 PDEVYNLAAQSF-----VGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRS  149 (345)
T ss_dssp             CSEEEECCCCCC-----HHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             CCEEEECCCCcc-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCCCCCCCCccCCCCCCC
Confidence            999999999743     11223457889999999999999999853 223799999998643           2345677


Q ss_pred             hhHhhHHHHHHHHHHHHHHhC---C-CeeEEEEeCCcccCCccccccCChhHHHHHHhh----------cccCCCCCHHH
Q 025273          159 MYGVTKTALLGLTKALAAEMA---P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN----------TLLNRLGTTRD  224 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~---~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~d  224 (255)
                      .|+.+|.+.+.+++.++.+++   . .+.++.+.||...|.+...+.   .........          .....++.++|
T Consensus       150 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~D  226 (345)
T 2z1m_A          150 PYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKIT---YSLARIKYGLQDKLVLGNLNAKRDWGYAPE  226 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH---HHHHHHHTTSCSCEEESCTTCEECCEEHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHH---HHHHHHHcCCCCeeeeCCCCceeeeEEHHH
Confidence            899999999999999999875   2 456777889988776532111   001100000          11123778999


Q ss_pred             HHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          225 MAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       225 ~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++++.++++...    ++.+++.+|...
T Consensus       227 va~a~~~~~~~~~----~~~~~i~~~~~~  251 (345)
T 2z1m_A          227 YVEAMWLMMQQPE----PDDYVIATGETH  251 (345)
T ss_dssp             HHHHHHHHHTSSS----CCCEEECCSCCE
T ss_pred             HHHHHHHHHhCCC----CceEEEeCCCCc
Confidence            9999999997643    367888777543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.94  E-value=2.4e-26  Score=195.26  Aligned_cols=227  Identities=16%  Similarity=0.020  Sum_probs=169.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch----hHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK----NVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +++|+||||||+|+||++++++|+++|++|++++|+..    .++.+.+++... ..++.++++|+++.++++++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            56899999999999999999999999999999999764    233332222111 2478899999999998888765   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC----------
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ----------  154 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------  154 (255)
                          ++|+|||+||.....     .+.+++++.+++|+.++.++++++.+.  ..+++|++||...+.+.          
T Consensus       102 ----~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~E~~~  170 (352)
T 1sb8_A          102 ----GVDYVLHQAALGSVP-----RSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHPGLPKVEDTI  170 (352)
T ss_dssp             ----TCSEEEECCSCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCCSSBCTTCC
T ss_pred             ----CCCEEEECCcccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhcCCCCCCCCCCCCC
Confidence                799999999974311     134567889999999999999998764  34699999998776443          


Q ss_pred             -CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC----hhHHHHHHhhcc---------cCCCC
Q 025273          155 -SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN----DGVRQTIEQNTL---------LNRLG  220 (255)
Q Consensus       155 -~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~---------~~~~~  220 (255)
                       .+...|+.+|.+.+.+++.++.++  +++++.++||.+.++........    ..+........+         ...++
T Consensus       171 ~~~~~~Y~~sK~~~e~~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  248 (352)
T 1sb8_A          171 GKPLSPYAVTKYVNELYADVFSRCY--GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC  248 (352)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeE
Confidence             246789999999999999999887  78999999999998865322101    112222222211         12467


Q ss_pred             CHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          221 TTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       221 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .++|+++++++++... ....|+++++.+|...
T Consensus       249 ~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  280 (352)
T 1sb8_A          249 YIENTVQANLLAATAG-LDARNQVYNIAVGGRT  280 (352)
T ss_dssp             EHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             EHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCc
Confidence            8999999998888652 2356899999988654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.94  E-value=3.5e-27  Score=198.79  Aligned_cols=215  Identities=16%  Similarity=0.134  Sum_probs=158.9

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ...+++|+||||||+|+||++++++|+++|++|++++|+........+.    ..++.++.+|+++.++++++++++   
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----l~~v~~~~~Dl~d~~~~~~~~~~~---   87 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP----VAGLSVIEGSVTDAGLLERAFDSF---   87 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS----CTTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc----cCCceEEEeeCCCHHHHHHHHhhc---
Confidence            3458899999999999999999999999999999999975432211111    147888999999999999988765   


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC-----C------
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----S------  155 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----~------  155 (255)
                        ++|+|||+||.... .     +.++++  +++|+.+++++++++...  +.++||++||..++.+.     +      
T Consensus        88 --~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~E~~~  155 (330)
T 2pzm_A           88 --KPTHVVHSAAAYKD-P-----DDWAED--AATNVQGSINVAKAASKA--GVKRLLNFQTALCYGRPATVPIPIDSPTA  155 (330)
T ss_dssp             --CCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHH--TCSEEEEEEEGGGGCSCSSSSBCTTCCCC
T ss_pred             --CCCEEEECCccCCC-c-----cccChh--HHHHHHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCccCCCCcCCCCC
Confidence              79999999997542 1     345555  899999999999998753  34699999998776543     2      


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCC-Cee-EEEEeCCcccCCccccccCChhHHHHHHhh-cc-----cCCCCCHHHHHH
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAP-DTR-VNCVAPGFVPTHFAEYITSNDGVRQTIEQN-TL-----LNRLGTTRDMAA  227 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~-~v~-v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~d~a~  227 (255)
                      +...|+.+|++.+.+++.+  ++.. .+| ++.+.||. .+++...+      ....... ..     ...++.++|+|+
T Consensus       156 ~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~Dva~  226 (330)
T 2pzm_A          156 PFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTF------YKRLKAGQKCFCSDTVRDFLDMSDFLA  226 (330)
T ss_dssp             CCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHH------HHHHHTTCCCCEESCEECEEEHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHH------HHHHHcCCEEeCCCCEecceeHHHHHH
Confidence            5679999999999999876  3333 466 56666764 33332111      1111100 00     345678999999


Q ss_pred             -HHHHhcCCCCCCccccEEEeCCCccc
Q 025273          228 -AAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       228 -~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                       ++.++++...    |+++++++|...
T Consensus       227 ~a~~~~~~~~~----g~~~~v~~~~~~  249 (330)
T 2pzm_A          227 IADLSLQEGRP----TGVFNVSTGEGH  249 (330)
T ss_dssp             HHHHHTSTTCC----CEEEEESCSCCE
T ss_pred             HHHHHHhhcCC----CCEEEeCCCCCC
Confidence             9999997642    899999998754

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.94  E-value=8e-26  Score=191.44  Aligned_cols=227  Identities=13%  Similarity=0.051  Sum_probs=161.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKA--RGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      +.+++|+||||||+|+||++++++|+++|  +.|++.+|......  ...+..  ...++.++++|+++.++++++++..
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   97 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER   97 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc
Confidence            34678999999999999999999999999  67888877642211  111111  1358899999999999999998864


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC---------
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ---------  154 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~---------  154 (255)
                           ++|+|||+||....     ....++++..+++|+.++.++++++.+.  ..+++|++||...+...         
T Consensus        98 -----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~vy~~~~~~~~~~E~  165 (346)
T 4egb_A           98 -----DVQVIVNFAAESHV-----DRSIENPIPFYDTNVIGTVTLLELVKKY--PHIKLVQVSTDEVYGSLGKTGRFTEE  165 (346)
T ss_dssp             -----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS--TTSEEEEEEEGGGGCCCCSSCCBCTT
T ss_pred             -----CCCEEEECCcccch-----hhhhhCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCchHHhCCCCcCCCcCCC
Confidence                 69999999997542     1234567788999999999999998765  34589999998665432         


Q ss_pred             ---CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcc---------cCCCCCH
Q 025273          155 ---SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL---------LNRLGTT  222 (255)
Q Consensus       155 ---~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  222 (255)
                         .+...|+.+|.+.+.+++.++.+.  +++++.+.|+.+.++..........+........+         ...++.+
T Consensus       166 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  243 (346)
T 4egb_A          166 TPLAPNSPYSSSKASADMIALAYYKTY--QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHV  243 (346)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEH
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEH
Confidence               245789999999999999999887  78999999999988754221111122222222211         1123458


Q ss_pred             HHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          223 RDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       223 ~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|+++++.+++....   .|+++++.+|...
T Consensus       244 ~Dva~a~~~~~~~~~---~g~~~~i~~~~~~  271 (346)
T 4egb_A          244 TDHCSAIDVVLHKGR---VGEVYNIGGNNEK  271 (346)
T ss_dssp             HHHHHHHHHHHHHCC---TTCEEEECCSCCE
T ss_pred             HHHHHHHHHHHhcCC---CCCEEEECCCCce
Confidence            999999999986654   6899999998754

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.94  E-value=1.2e-25  Score=191.31  Aligned_cols=229  Identities=17%  Similarity=0.080  Sum_probs=169.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|+||||||+|+||++++++|+++|++|++++|+.+..+...+.+. ...++.++++|+++.++++++++.+     +
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   80 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----Q   80 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----C
Confidence            568999999999999999999999999999999998765444433332 2457788999999999999988765     7


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC------------CCCCC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------PQSSM  157 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------------~~~~~  157 (255)
                      +|+|||+||...     ...+.+++++.+++|+.++.++++++.+. ...+++|++||...+.            +..+.
T Consensus        81 ~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~  154 (357)
T 1rkx_A           81 PEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV-GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY  154 (357)
T ss_dssp             CSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH-CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS
T ss_pred             CCEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCC
Confidence            999999999632     12234567889999999999999998764 2356999999986432            33456


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhC------C-CeeEEEEeCCcccCCccccccC-ChhHHHHHHhhc--------ccCCCCC
Q 025273          158 AMYGVTKTALLGLTKALAAEMA------P-DTRVNCVAPGFVPTHFAEYITS-NDGVRQTIEQNT--------LLNRLGT  221 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~------~-~v~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~  221 (255)
                      ..|+.+|.+.+.+++.++.++.      + +++++.++||.+.++....... ...+........        ....+..
T Consensus       155 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~  234 (357)
T 1rkx_A          155 DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQH  234 (357)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEE
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEe
Confidence            7899999999999999999874      3 8999999999999875321000 011111111111        1123567


Q ss_pred             HHHHHHHHHHhcCCC--CCCccccEEEeCCC
Q 025273          222 TRDMAAAAAFLASDD--ASYITGETLVVAGG  250 (255)
Q Consensus       222 ~~d~a~~~~~l~s~~--~~~~~G~~i~~dgG  250 (255)
                      .+|++++++.++...  .....|+++++.+|
T Consensus       235 v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          235 VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             THHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             HHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            899999988877531  11135788999875

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.94  E-value=6.7e-26  Score=193.19  Aligned_cols=223  Identities=15%  Similarity=0.069  Sum_probs=157.7

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHH--cCCeEEEEeCCchhHHHHH-------HHHHhcCCeEEEEEecCCCHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGL--EGASVVVSSRKQKNVDEAV-------VKLKARGIEVIGVVCHVSNGQQRK   77 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~   77 (255)
                      ++++++|+||||||+|+||++++++|++  +|++|++++|+........       ......+.++.++++|+++.++++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence            3457899999999999999999999999  8999999999765211100       001112446788999999999988


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC----
Q 025273           78 NLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP----  153 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~----  153 (255)
                      ++      ...++|+|||+||....       +.++++..+++|+.++.++++++...   +.+||++||...+..    
T Consensus        85 ~~------~~~~~D~vih~A~~~~~-------~~~~~~~~~~~Nv~gt~~ll~aa~~~---~~~~V~~SS~~vyg~~~~~  148 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSDT-------TMLNQELVMKTNYQAFLNLLEIARSK---KAKVIYASSAGVYGNTKAP  148 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCGG-------GCCCHHHHHHHHTHHHHHHHHHHHHT---TCEEEEEEEGGGGCSCCSS
T ss_pred             Hh------hccCCCEEEECCccCCc-------cccCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEeCcHHHhCCCCCC
Confidence            76      23489999999996431       33457889999999999999988643   346999999665432    


Q ss_pred             ------CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC----ChhHHHHHHhhc---------
Q 025273          154 ------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQNT---------  214 (255)
Q Consensus       154 ------~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~---------  214 (255)
                            ..+...|+.+|.+.+.+++.++.+    +++..+.|+.+..|.......    ...+........         
T Consensus       149 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  224 (362)
T 3sxp_A          149 NVVGKNESPENVYGFSKLCMDEFVLSHSND----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGE  224 (362)
T ss_dssp             BCTTSCCCCSSHHHHHHHHHHHHHHHTTTT----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGC
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHhcc----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCC
Confidence                  234567999999999999988776    566677777766654322110    011112221111         


Q ss_pred             ccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          215 LLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       215 ~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ....++.++|+|++++++++.+.   +| ++++.+|...
T Consensus       225 ~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~  259 (362)
T 3sxp_A          225 QLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQAR  259 (362)
T ss_dssp             CEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEE
T ss_pred             eEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCc
Confidence            12235669999999999997653   57 9999988654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.93  E-value=1.2e-25  Score=188.42  Aligned_cols=223  Identities=14%  Similarity=0.048  Sum_probs=168.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHH-HcCCeEEEEeCCchh------------HHHHHHHHHhcCCeEEEEEecCCCHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQKN------------VDEAVVKLKARGIEVIGVVCHVSNGQQ   75 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~-~~G~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~Dv~~~~~   75 (255)
                      .+.+|+|||||||+|||++++..|+ +.|+.|+++++..+.            .+.+.+++.+.+.+...++||+++.++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            3568999999999999999999999 689999999876543            234556677778999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCEEEEcCCCCCCCC------------C---------------------ccCCCHHHHHHHH---H
Q 025273           76 RKNLINQTIEKFGKIDVVVSNAAANPSVD------------S---------------------ILQTKESVLDKLW---D  119 (255)
Q Consensus        76 v~~~~~~~~~~~g~~d~lv~~ag~~~~~~------------~---------------------~~~~~~~~~~~~~---~  119 (255)
                      ++++++++.+.+|++|+|||+++......            +                     +...+.++++.+.   .
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            99999999999999999999999753111            0                     1223455665544   4


Q ss_pred             HHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCC--ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcc
Q 025273          120 INVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS--MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (255)
Q Consensus       120 ~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~  197 (255)
                      ...+..+...+...+.|.++++++.+|+..+....|.  ...+|++|++++..++.|+.++.+ ++++.++||.+.|+..
T Consensus       207 ~s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~-~~a~v~v~~a~vT~As  285 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS-IRAFVSVNKGLVTRAS  285 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT-EEEEEEECCCCCCTTG
T ss_pred             hhHHHHHHHHHHhhhcccCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEcCccccchh
Confidence            5666677777777888999999999999888765443  347899999999999999999985 8999999999999887


Q ss_pred             ccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          198 EYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      ..++..+--...+..  .++..++-|.+.+.+..|..
T Consensus       286 saIP~~ply~~~l~k--vmk~~g~heg~ieq~~rl~~  320 (401)
T 4ggo_A          286 AVIPVIPLYLASLFK--VMKEKGNHEGCIEQITRLYA  320 (401)
T ss_dssp             GGSSSHHHHHHHHHH--HHHHHTCCCCHHHHHHHHHH
T ss_pred             hcCCCchHHHHHHHH--HHHhcCCCCchHHHHHHHHH
Confidence            766543321111111  12223455666666665553

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.93  E-value=6e-26  Score=183.64  Aligned_cols=215  Identities=11%  Similarity=0.014  Sum_probs=156.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++|++|||||+|+||++++++|+++  |++|++++|+.+..+.+       ..++.++++|+++.++++++++       
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~-------   68 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ-------   68 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc-------
Confidence            4689999999999999999999999  89999999997654322       3466788999999999888775       


Q ss_pred             CCCEEEEcCCCCCCCCC--------ccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChh-
Q 025273           89 KIDVVVSNAAANPSVDS--------ILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAM-  159 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~-  159 (255)
                      .+|++||+||.......        ..+...+.+++.+++|+.++.++++++.+.  +.++||++||..+..+..+... 
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~~  146 (253)
T 1xq6_A           69 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA--GVKHIVVVGSMGGTNPDHPLNKL  146 (253)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH--TCSEEEEEEETTTTCTTCGGGGG
T ss_pred             CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc--CCCEEEEEcCccCCCCCCccccc
Confidence            69999999997532110        011223345567899999999999988764  3469999999988765544444 


Q ss_pred             ----hHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          160 ----YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       160 ----y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                          |+.+|.+++.+++.      .+++++.++||++.++................  ....++..++|+++.++++++.
T Consensus       147 ~~~~y~~sK~~~e~~~~~------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dva~~~~~~~~~  218 (253)
T 1xq6_A          147 GNGNILVWKRKAEQYLAD------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELL--QTDTKTVPRADVAEVCIQALLF  218 (253)
T ss_dssp             GGCCHHHHHHHHHHHHHT------SSSCEEEEEECEEECSCSSSSCEEEESTTGGG--GSSCCEEEHHHHHHHHHHHTTC
T ss_pred             cchhHHHHHHHHHHHHHh------CCCceEEEecceeecCCcchhhhhccCCcCCc--CCCCcEEcHHHHHHHHHHHHcC
Confidence                55699999988763      48999999999999875421100000000010  1123467899999999999976


Q ss_pred             CCCCccccEEEeCCCc
Q 025273          236 DASYITGETLVVAGGM  251 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~  251 (255)
                      +.  .+|+.+++++|.
T Consensus       219 ~~--~~g~~~~i~~~~  232 (253)
T 1xq6_A          219 EE--AKNKAFDLGSKP  232 (253)
T ss_dssp             GG--GTTEEEEEEECC
T ss_pred             cc--ccCCEEEecCCC
Confidence            43  468999999863

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.93  E-value=1e-25  Score=190.89  Aligned_cols=219  Identities=16%  Similarity=0.075  Sum_probs=162.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhH-HHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNV-DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      |+||||||+|+||++++++|+++  |++|++++|+.... ....+++  ...++.++++|+++.++++++++       .
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~   75 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------K   75 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh-------c
Confidence            68999999999999999999999  89999999975311 0111111  13578899999999998888765       5


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------------
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------------  152 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------------  152 (255)
                      +|++||+||....     +.+.+++++.+++|+.++.++++++.+.   +.++|++||...+.                 
T Consensus        76 ~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~  147 (348)
T 1oc2_A           76 ADAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY---DIRFHHVSTDEVYGDLPLREDLPGHGEGPGE  147 (348)
T ss_dssp             CSEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTS
T ss_pred             CCEEEECCcccCc-----cchhhCHHHHHHHHHHHHHHHHHHHHHh---CCeEEEecccceeCCCcccccccccccccCC
Confidence            7999999997431     1233456788999999999999999875   24999999976432                 


Q ss_pred             ------CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhc---------ccC
Q 025273          153 ------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT---------LLN  217 (255)
Q Consensus       153 ------~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~  217 (255)
                            +..+...|+.+|.+.+.+++.++.++  +++++.++||.+.++..........+........         ...
T Consensus       148 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (348)
T 1oc2_A          148 KFTAETNYNPSSPYSSTKAASDLIVKAWVRSF--GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVR  225 (348)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEE
T ss_pred             CcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh--CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceE
Confidence                  23456789999999999999999887  7999999999999886531100011122221111         122


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          218 RLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       218 ~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .+..++|+++++.++++..   .+|+++++++|...
T Consensus       226 ~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~  258 (348)
T 1oc2_A          226 DWIHTNDHSTGVWAILTKG---RMGETYLIGADGEK  258 (348)
T ss_dssp             ECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             eeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCC
Confidence            4667999999999988653   36899999998654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.93  E-value=3.3e-25  Score=176.29  Aligned_cols=188  Identities=9%  Similarity=0.041  Sum_probs=140.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHH-HcCCeEEEEeCCch-hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~-~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      |++|||||+|+||++++++|+ ++|++|++++|+.+ .++.+.    ....++.++++|+++.++++++++       .+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------NA   74 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------CC
Confidence            789999999999999999999 89999999999976 544432    235688999999999999888875       78


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCCh----------
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMA----------  158 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~----------  158 (255)
                      |++|||+|..                    |+.     .+.+++.++  +.++||++||..++.+.+...          
T Consensus        75 d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~  129 (221)
T 3r6d_A           75 EVVFVGAMES--------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPI  129 (221)
T ss_dssp             SEEEESCCCC--------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCH
T ss_pred             CEEEEcCCCC--------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccccc
Confidence            9999999852                    222     555566554  346999999998877655433          


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCc-cccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhc--CC
Q 025273          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF-AEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA--SD  235 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~--s~  235 (255)
                      .|+.+|.+++.+++.      .+++++.|+||++.++. ...+....      ......+....++|+|+.+++++  ++
T Consensus       130 ~y~~~K~~~e~~~~~------~~i~~~~vrpg~v~~~~~~~~~~~~~------~~~~~~~~~~~~~dvA~~~~~l~~~~~  197 (221)
T 3r6d_A          130 SYVQGERQARNVLRE------SNLNYTILRLTWLYNDPEXTDYELIP------EGAQFNDAQVSREAVVKAIFDILHAAD  197 (221)
T ss_dssp             HHHHHHHHHHHHHHH------SCSEEEEEEECEEECCTTCCCCEEEC------TTSCCCCCEEEHHHHHHHHHHHHTCSC
T ss_pred             HHHHHHHHHHHHHHh------CCCCEEEEechhhcCCCCCcceeecc------CCccCCCceeeHHHHHHHHHHHHHhcC
Confidence            899999999988763      38999999999998873 22111100      01112234678999999999999  88


Q ss_pred             CCCCccccEEEeCC
Q 025273          236 DASYITGETLVVAG  249 (255)
Q Consensus       236 ~~~~~~G~~i~~dg  249 (255)
                      +..++++ .+.+.+
T Consensus       198 ~~~~~~~-~~~i~~  210 (221)
T 3r6d_A          198 ETPFHRT-SIGVGE  210 (221)
T ss_dssp             CGGGTTE-EEEEEC
T ss_pred             hhhhhcc-eeeecC
Confidence            7766654 455543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.93  E-value=3.9e-25  Score=187.28  Aligned_cols=217  Identities=18%  Similarity=0.124  Sum_probs=158.1

Q ss_pred             cccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         5 ~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +.+.++++|+||||||+|+||++++++|+++|++|++++|+.+.            .++.++++|+++.++++++++   
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~---   76 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM---   76 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT---
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh---
Confidence            33456788999999999999999999999999999999999764            367788999999999888776   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC------------
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------  152 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------------  152 (255)
                          ++|++||+|+...       .+.+.++..+++|+.++.++++++.+.  ..+++|++||...+.            
T Consensus        77 ----~~d~vih~A~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~V~~SS~~vyg~~~~~~~~~~E~  143 (347)
T 4id9_A           77 ----GVSAVLHLGAFMS-------WAPADRDRMFAVNVEGTRRLLDAASAA--GVRRFVFASSGEVYPENRPEFLPVTED  143 (347)
T ss_dssp             ----TCSEEEECCCCCC-------SSGGGHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGTTTTSCSSSSBCTT
T ss_pred             ----CCCEEEECCcccC-------cchhhHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHHhCCCCCCCCCcCCC
Confidence                7999999999754       223345889999999999999998763  345999999965542            


Q ss_pred             -CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCccc-------------CCccccccC-------ChhHHHHHH
Q 025273          153 -PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVP-------------THFAEYITS-------NDGVRQTIE  211 (255)
Q Consensus       153 -~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~-------------t~~~~~~~~-------~~~~~~~~~  211 (255)
                       +..+...|+.+|.+.+.+++.++.+.  +++++.+.|+.+.             .+.......       .......+.
T Consensus       144 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
T 4id9_A          144 HPLCPNSPYGLTKLLGEELVRFHQRSG--AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELL  221 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHS--SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhc--CCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHH
Confidence             23467789999999999999998886  7899999999988             322110000       011111111


Q ss_pred             ----hhc---------ccCCC----CCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          212 ----QNT---------LLNRL----GTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       212 ----~~~---------~~~~~----~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                          ...         ....+    ..++|+|++++.++....  ..|+++++.+|...
T Consensus       222 ~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~  278 (347)
T 4id9_A          222 QSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPA  278 (347)
T ss_dssp             HHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCE
T ss_pred             HHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCcc
Confidence                111         11223    678999999999986653  34899999988754

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.93  E-value=3e-25  Score=193.26  Aligned_cols=221  Identities=13%  Similarity=0.017  Sum_probs=161.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch---hHHHHHHHHHh---------cCCeEEEEEecCCCHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK---NVDEAVVKLKA---------RGIEVIGVVCHVSNGQQR   76 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~---------~~~~~~~~~~Dv~~~~~v   76 (255)
                      ...+|+||||||+|+||++++++|+++|++|++++|+.+   ..+.+.+.+..         ...++.++.+|+++.+++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            356789999999999999999999999999999999987   33444433322         146899999999998887


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc------
Q 025273           77 KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG------  150 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~------  150 (255)
                      .        .++++|+||||||...        ..+.+++.+++|+.++.++++++.+   ..+++|++||..+      
T Consensus       146 ~--------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~G~~~~~  206 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISVGTYFDI  206 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGGGSEECS
T ss_pred             C--------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHhCCCccC
Confidence            7        3568999999999753        1245788899999999999999987   4569999999876      


Q ss_pred             ------------cCCCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC-------hhHHHHHH
Q 025273          151 ------------YQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN-------DGVRQTIE  211 (255)
Q Consensus       151 ------------~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~-------~~~~~~~~  211 (255)
                                  ..+..+...|+.+|.+.+.+++.++.   .+++++.+.||.+.++........       ..+.....
T Consensus       207 ~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~  283 (427)
T 4f6c_A          207 DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN---NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLL  283 (427)
T ss_dssp             SCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH---TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHH
T ss_pred             CCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH---cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHH
Confidence                        01133678999999999999998764   389999999999988765432111       11122211


Q ss_pred             hh--------cccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          212 QN--------TLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       212 ~~--------~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ..        .....+..++|+|+++++++....   .|+++++++|...+
T Consensus       284 ~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s  331 (427)
T 4f6c_A          284 QLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMP  331 (427)
T ss_dssp             HSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCEE
T ss_pred             hcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCCc
Confidence            11        122336788999999999987654   78999999987643

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.93  E-value=4.2e-25  Score=187.35  Aligned_cols=227  Identities=13%  Similarity=0.009  Sum_probs=170.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-----CeEEEEEecCCCHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-----IEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +++|+||||||+|+||++++++|+++|++|++++|+..........+....     .++.++++|+++.++++++++   
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK---   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc---
Confidence            458999999999999999999999999999999997664444444443321     578999999999999888765   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC----------
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ----------  154 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------  154 (255)
                          ++|++||+||....     ..+.+++...+++|+.++.++++++...-  .+++|++||...+...          
T Consensus       100 ----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vyg~~~~~~~~E~~~  168 (351)
T 3ruf_A          100 ----GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKNAQ--VQSFTYAASSSTYGDHPALPKVEENI  168 (351)
T ss_dssp             ----TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGTTCCCSSBCTTCC
T ss_pred             ----CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEecHHhcCCCCCCCCccCCC
Confidence                79999999996431     12345567889999999999999887652  3599999998766332          


Q ss_pred             -CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC----hhHHHHHHhhcc---------cCCCC
Q 025273          155 -SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN----DGVRQTIEQNTL---------LNRLG  220 (255)
Q Consensus       155 -~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~---------~~~~~  220 (255)
                       .+...|+.+|.+.+.+++.++.+.  +++++.+.|+.+.++........    ..+........+         ...+.
T Consensus       169 ~~p~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  246 (351)
T 3ruf_A          169 GNPLSPYAVTKYVNEIYAQVYARTY--GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFC  246 (351)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeE
Confidence             345789999999999999999887  78999999999988754322111    112222222211         12356


Q ss_pred             CHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          221 TTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       221 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .++|++++++.++... ....|+++++.+|...
T Consensus       247 ~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  278 (351)
T 3ruf_A          247 YIDNVIQMNILSALAK-DSAKDNIYNVAVGDRT  278 (351)
T ss_dssp             EHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             EHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcc
Confidence            7899999999888652 2356899999988654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.93  E-value=8.9e-26  Score=179.34  Aligned_cols=193  Identities=17%  Similarity=0.212  Sum_probs=154.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~~d   91 (255)
                      +++|||||+|+||++++++|+++|++|++++|+.+..+..        .++.++++|+++ .++++++++       ++|
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~d   65 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GMD   65 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TCS
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CCC
Confidence            3699999999999999999999999999999997654321        478999999999 888877765       799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCC-------ChhhHhhH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS-------MAMYGVTK  164 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-------~~~y~~sK  164 (255)
                      ++||+||....             +.+++|+.++.++++++...  ..+++|++||..+..+.+.       ...|+.+|
T Consensus        66 ~vi~~ag~~~~-------------~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK  130 (219)
T 3dqp_A           66 AIINVSGSGGK-------------SLLKVDLYGAVKLMQAAEKA--EVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAK  130 (219)
T ss_dssp             EEEECCCCTTS-------------SCCCCCCHHHHHHHHHHHHT--TCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHH
T ss_pred             EEEECCcCCCC-------------CcEeEeHHHHHHHHHHHHHh--CCCEEEEECcccccCCCcccccccccccHHHHHH
Confidence            99999997541             15788999999999988653  3359999999988776555       78999999


Q ss_pred             HHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      .+.+.+++   .  ..+++++.++||++.++........         ......+..++|+|+.+.++++.+.  ..|++
T Consensus       131 ~~~e~~~~---~--~~~i~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~i~~~Dva~~i~~~l~~~~--~~g~~  194 (219)
T 3dqp_A          131 HFADLYLT---K--ETNLDYTIIQPGALTEEEATGLIDI---------NDEVSASNTIGDVADTIKELVMTDH--SIGKV  194 (219)
T ss_dssp             HHHHHHHH---H--SCCCEEEEEEECSEECSCCCSEEEE---------SSSCCCCEEHHHHHHHHHHHHTCGG--GTTEE
T ss_pred             HHHHHHHH---h--ccCCcEEEEeCceEecCCCCCcccc---------CCCcCCcccHHHHHHHHHHHHhCcc--ccCcE
Confidence            99999886   1  2389999999999988754322111         1344567899999999999997653  45899


Q ss_pred             EEeCCCc
Q 025273          245 LVVAGGM  251 (255)
Q Consensus       245 i~~dgG~  251 (255)
                      +++++|.
T Consensus       195 ~~i~~g~  201 (219)
T 3dqp_A          195 ISMHNGK  201 (219)
T ss_dssp             EEEEECS
T ss_pred             EEeCCCC
Confidence            9998775

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.93  E-value=3.7e-24  Score=184.75  Aligned_cols=230  Identities=12%  Similarity=0.049  Sum_probs=163.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHH-----------------HHHHHHHhcCCeEEEEEecC
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-----------------EAVVKLKARGIEVIGVVCHV   70 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~~~~~~~~~~~Dv   70 (255)
                      +..++++||||||+|+||++++++|+++|++|++++|......                 .+.+.....+.++.++++|+
T Consensus         7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl   86 (404)
T 1i24_A            7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI   86 (404)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred             cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence            3456889999999999999999999999999999998754321                 11111111245788899999


Q ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           71 SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        71 ~~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      ++.++++++++..     ++|+|||+||....  .....+++++...+++|+.++.++++++.+... ..++|++||...
T Consensus        87 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~~~~V~~SS~~v  158 (404)
T 1i24_A           87 CDFEFLAESFKSF-----EPDSVVHFGEQRSA--PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-ECHLVKLGTMGE  158 (404)
T ss_dssp             TSHHHHHHHHHHH-----CCSEEEECCSCCCH--HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEECCGGG
T ss_pred             CCHHHHHHHHhcc-----CCCEEEECCCCCCc--cchhhCccchhhhHHHHHHHHHHHHHHHHHhCC-CcEEEEeCcHHH
Confidence            9999999888765     69999999997531  122235667788999999999999999876531 249999999865


Q ss_pred             cC------------------------CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc-----
Q 025273          151 YQ------------------------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT-----  201 (255)
Q Consensus       151 ~~------------------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~-----  201 (255)
                      +.                        +..+...|+.+|.+.+.+++.++.++  +++++.++||.+.++......     
T Consensus       159 yg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~ivrp~~v~Gp~~~~~~~~~~~  236 (404)
T 1i24_A          159 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVKTDETEMHEEL  236 (404)
T ss_dssp             GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECSCCTTGGGSGGG
T ss_pred             hCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc--CCeEEEEecceeeCCCCCcccccccc
Confidence            42                        33456789999999999999999887  799999999999987542100     


Q ss_pred             ----------C--ChhHHHHHHhhcc---------cCCCCCHHHHHHHHHHhcCCCCCCccc--cEEEeCC
Q 025273          202 ----------S--NDGVRQTIEQNTL---------LNRLGTTRDMAAAAAFLASDDASYITG--ETLVVAG  249 (255)
Q Consensus       202 ----------~--~~~~~~~~~~~~~---------~~~~~~~~d~a~~~~~l~s~~~~~~~G--~~i~~dg  249 (255)
                                .  ...+........+         ...+..++|+|++++.++.....  .|  +++++.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~--~g~~~~yni~~  305 (404)
T 1i24_A          237 RNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK--AGEFRVFNQFT  305 (404)
T ss_dssp             CCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC--TTCEEEEEECS
T ss_pred             ccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCccc--CCCceEEEECC
Confidence                      0  0112222222111         12345689999999988855432  35  6888865

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.93  E-value=5.2e-25  Score=186.03  Aligned_cols=209  Identities=13%  Similarity=0.117  Sum_probs=154.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++||||||+|+||++++++|+++|++|++++|+....+.+    .  ..++.++++|+++.++++++++       ++|+
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~--~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   80 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A--YLEPECRVAEMLDHAGLERALR-------GLDG   80 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G--GGCCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c--cCCeEEEEecCCCHHHHHHHHc-------CCCE
Confidence            5899999999999999999999999999999987654322    1  1267788999999998887765       6999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCC----------------
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS----------------  156 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~----------------  156 (255)
                      +||+||...       .+.+++++.+++|+.++.++++++.+.  ..+++|++||...+.+...                
T Consensus        81 vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~  151 (342)
T 2x4g_A           81 VIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA--RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSG  151 (342)
T ss_dssp             EEEC-------------------CHHHHHHHHHHHHHHHHHHH--TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTT
T ss_pred             EEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccc
Confidence            999999643       223457788999999999999999875  3469999999887654333                


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcc-ccccCChhHHHHHHhhcc------cCCCCCHHHHHHHH
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA-EYITSNDGVRQTIEQNTL------LNRLGTTRDMAAAA  229 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~d~a~~~  229 (255)
                      ...|+.+|.+.+.+++.++.+   +++++.++||.+.++.. ...  ...+........+      ...+..++|+++++
T Consensus       152 ~~~Y~~sK~~~e~~~~~~~~~---g~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  226 (342)
T 2x4g_A          152 KSSYVLCKWALDEQAREQARN---GLPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGL  226 (342)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHT---TCCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHHhhc---CCcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccccCCCcceeeHHHHHHHH
Confidence            678999999999999998873   78999999999998865 211  1222222222211      11256899999999


Q ss_pred             HHhcCCCCCCccccEEEeCCCc
Q 025273          230 AFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       230 ~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      +++++...   .|+++++++|.
T Consensus       227 ~~~~~~~~---~g~~~~v~~~~  245 (342)
T 2x4g_A          227 LMALERGR---IGERYLLTGHN  245 (342)
T ss_dssp             HHHHHHSC---TTCEEEECCEE
T ss_pred             HHHHhCCC---CCceEEEcCCc
Confidence            99986544   28899999886

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.93  E-value=2.1e-24  Score=169.38  Aligned_cols=198  Identities=12%  Similarity=0.059  Sum_probs=150.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||+|+||++++++|+++|++|++++|+.+..+..      ...++.++++|+++.++++++++       .+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   69 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------CCC
Confidence            47899999999999999999999999999999997653211      13478889999999998887765       689


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCC----CChhhHhhHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS----SMAMYGVTKTAL  167 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~----~~~~y~~sK~a~  167 (255)
                      ++||++|.....    +  +      .++|+.++.++++++.+.  +.+++|++||...+...+    +...|+.+|.++
T Consensus        70 ~vi~~a~~~~~~----~--~------~~~n~~~~~~~~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~  135 (206)
T 1hdo_A           70 AVIVLLGTRNDL----S--P------TTVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRM  135 (206)
T ss_dssp             EEEECCCCTTCC----S--C------CCHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHH
T ss_pred             EEEECccCCCCC----C--c------cchHHHHHHHHHHHHHHh--CCCeEEEEeeeeeccCcccccccchhHHHHHHHH
Confidence            999999975421    1  1      137888888888887654  345999999987765544    567899999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEEeCCcc-cCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          168 LGLTKALAAEMAPDTRVNCVAPGFV-PTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.+++.      .+++++.++||++ .++....+...      . ...+.+.+..++|+++.+.++++.+.  .+|+.++
T Consensus       136 e~~~~~------~~i~~~~lrp~~~~~~~~~~~~~~~------~-~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~  200 (206)
T 1hdo_A          136 HKVLRE------SGLKYVAVMPPHIGDQPLTGAYTVT------L-DGRGPSRVISKHDLGHFMLRCLTTDE--YDGHSTY  200 (206)
T ss_dssp             HHHHHH------TCSEEEEECCSEEECCCCCSCCEEE------S-SSCSSCSEEEHHHHHHHHHHTTSCST--TTTCEEE
T ss_pred             HHHHHh------CCCCEEEEeCCcccCCCCCcceEec------c-cCCCCCCccCHHHHHHHHHHHhcCcc--cccccee
Confidence            998852      3799999999998 34332211110      0 01111467899999999999997653  6899999


Q ss_pred             eCCCc
Q 025273          247 VAGGM  251 (255)
Q Consensus       247 ~dgG~  251 (255)
                      ++||.
T Consensus       201 i~~g~  205 (206)
T 1hdo_A          201 PSHQY  205 (206)
T ss_dssp             EECCC
T ss_pred             eeccc
Confidence            99986

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.93  E-value=8.8e-25  Score=184.28  Aligned_cols=215  Identities=18%  Similarity=0.065  Sum_probs=153.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+++|+||||||+|+||++++++|+++|++|++++|+......   .+.. ..++.++++|+++.++++++++..    
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~----   88 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKD-HPNLTFVEGSIADHALVNQLIGDL----   88 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCC-CTTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhh-cCCceEEEEeCCCHHHHHHHHhcc----
Confidence            44778999999999999999999999999999999998543211   1110 147888999999999999888752    


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC----CC--------C
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ----PQ--------S  155 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~----~~--------~  155 (255)
                       ++|+|||+||.... .     +.++++  +++|+.++.++++++.+.  ..++||++||...+.    ..        .
T Consensus        89 -~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~  157 (333)
T 2q1w_A           89 -QPDAVVHTAASYKD-P-----DDWYND--TLTNCVGGSNVVQAAKKN--NVGRFVYFQTALCYGVKPIQQPVRLDHPRN  157 (333)
T ss_dssp             -CCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGCSCCCSSSBCTTSCCC
T ss_pred             -CCcEEEECceecCC-C-----ccCChH--HHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCCcccCCCCcCCCCC
Confidence             69999999997542 1     334444  899999999999999874  346999999987764    21        2


Q ss_pred             CC-hhhHhhHHHHHHHHHH-HHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHh------hcccCCCCCHHHHHH
Q 025273          156 SM-AMYGVTKTALLGLTKA-LAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ------NTLLNRLGTTRDMAA  227 (255)
Q Consensus       156 ~~-~~y~~sK~a~~~l~~~-la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~a~  227 (255)
                      +. ..|+.+|.+.+.+++. ++       ++..+.|+.+..+..... ....+......      ......++.++|+++
T Consensus       158 p~~~~Y~~sK~~~E~~~~~s~~-------~~~ilR~~~v~gp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  229 (333)
T 2q1w_A          158 PANSSYAISKSANEDYLEYSGL-------DFVTFRLANVVGPRNVSG-PLPIFFQRLSEGKKCFVTKARRDFVFVKDLAR  229 (333)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHTC-------CEEEEEESEEESTTCCSS-HHHHHHHHHHTTCCCEEEECEECEEEHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHhhhC-------CeEEEeeceEECcCCcCc-HHHHHHHHHHcCCeeeCCCceEeeEEHHHHHH
Confidence            34 7899999999999987 55       455667766655431000 00111111111      122345678999999


Q ss_pred             HHHHhcCCCCCCccccEEEeCCCccc
Q 025273          228 AAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++.++++...    |+++++++|...
T Consensus       230 ai~~~~~~~~----g~~~~v~~~~~~  251 (333)
T 2q1w_A          230 ATVRAVDGVG----HGAYHFSSGTDV  251 (333)
T ss_dssp             HHHHHHTTCC----CEEEECSCSCCE
T ss_pred             HHHHHHhcCC----CCEEEeCCCCCc
Confidence            9999997654    899999998754

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.93  E-value=2.6e-25  Score=185.65  Aligned_cols=216  Identities=16%  Similarity=0.059  Sum_probs=159.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||+|+||++++++|+++|++|++++|.......      .....+.++++|+++.+++++++++.     ++|.
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~   69 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFREF-----RPTH   69 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHhc-----CCCE
Confidence            369999999999999999999999999999985432110      11135667899999999998888753     7999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc-CccC------------CCCCChh
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI-AGYQ------------PQSSMAM  159 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~-~~~~------------~~~~~~~  159 (255)
                      +||+|+....     ..+.+++++.+++|+.+++++++++.+.  ..+++|++||. ..+.            +..+...
T Consensus        70 vi~~a~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~  142 (311)
T 2p5y_A           70 VSHQAAQASV-----KVSVEDPVLDFEVNLLGGLNLLEACRQY--GVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSP  142 (311)
T ss_dssp             EEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSH
T ss_pred             EEECccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCCh
Confidence            9999996431     1234567889999999999999988753  23599999997 3221            1235678


Q ss_pred             hHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC---hhHHHHHHhhc--------------ccCCCCCH
Q 025273          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN---DGVRQTIEQNT--------------LLNRLGTT  222 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~--------------~~~~~~~~  222 (255)
                      |+.+|++.+.+++.++.++  +++++.+.|+.+.+|........   ..+........              ....+..+
T Consensus       143 Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  220 (311)
T 2p5y_A          143 YAASKAAFEHYLSVYGQSY--GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYV  220 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEH
T ss_pred             HHHHHHHHHHHHHHHHHHc--CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEH
Confidence            9999999999999999887  78999999999998864321111   11111111111              11235678


Q ss_pred             HHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          223 RDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       223 ~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|+++++.++++..     |+.+++++|...
T Consensus       221 ~Dva~a~~~~~~~~-----~~~~~i~~~~~~  246 (311)
T 2p5y_A          221 GDVAEAHALALFSL-----EGIYNVGTGEGH  246 (311)
T ss_dssp             HHHHHHHHHHHHHC-----CEEEEESCSCCE
T ss_pred             HHHHHHHHHHHhCC-----CCEEEeCCCCCc
Confidence            99999999888542     789999988754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.93  E-value=6.3e-25  Score=188.24  Aligned_cols=222  Identities=13%  Similarity=0.004  Sum_probs=162.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++|+||||||+|+||++++++|+++| ++|++++|+......   .+. ...++.++++|+++.++++++++      
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~------   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQD------   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCS------
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhh------
Confidence            4778999999999999999999999999 999999998654211   110 13578899999999988777654      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC---------------
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ---------------  152 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~---------------  152 (255)
                       ++|+|||+||....     ..+.+++++.+++|+.++.++++++...- ..+++|++||...+.               
T Consensus        99 -~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~  171 (377)
T 2q1s_A           99 -EYDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERLKHFK-RLKKVVYSAAGCSIAEKTFDDAKATEETDI  171 (377)
T ss_dssp             -CCSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHHTTCS-SCCEEEEEEEC--------------CCCCC
T ss_pred             -CCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHcCCCCCCCcCccccccc
Confidence             79999999996431     12334578899999999999999886530 235899999976431               


Q ss_pred             -CC-CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcc---------cccc--C--ChhHHHHHHhhccc-
Q 025273          153 -PQ-SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA---------EYIT--S--NDGVRQTIEQNTLL-  216 (255)
Q Consensus       153 -~~-~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~---------~~~~--~--~~~~~~~~~~~~~~-  216 (255)
                       +. .+...|+.+|.+.+.+++.++.++  +++++.+.||.+.++..         ....  .  ...+........+. 
T Consensus       172 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  249 (377)
T 2q1s_A          172 VSLHNNDSPYSMSKIFGEFYSVYYHKQH--QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLP  249 (377)
T ss_dssp             CCSSCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCC
T ss_pred             ccccCCCCchHHHHHHHHHHHHHHHHHh--CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeE
Confidence             22 456789999999999999999887  78999999999998764         2100  0  11122222222221 


Q ss_pred             --------CCCCCHHHHHHH-HHHhcCCCCCCccccEEEeCCCccc
Q 025273          217 --------NRLGTTRDMAAA-AAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       217 --------~~~~~~~d~a~~-~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                              ..++.++|++++ +++++....   +| ++++.+|...
T Consensus       250 ~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~  291 (377)
T 2q1s_A          250 LENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKET  291 (377)
T ss_dssp             CSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCE
T ss_pred             EeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCce
Confidence                    234568999999 998886643   68 9999988654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.93  E-value=3.4e-25  Score=186.89  Aligned_cols=220  Identities=15%  Similarity=0.071  Sum_probs=161.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc---C---CeEEEEeCCchh--HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLE---G---ASVVVSSRKQKN--VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~---G---~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +++|||||+|+||++++++|+++   |   ++|++++|+...  .+.+ +.+. ...++.++++|+++.+++++++    
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~----   74 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD-ADPRLRFVHGDIRDAGLLAREL----   74 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT-TCTTEEEEECCTTCHHHHHHHT----
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc-cCCCeEEEEcCCCCHHHHHHHh----
Confidence            36999999999999999999997   8   899999986421  1111 1111 1357889999999999888776    


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------C
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------P  153 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~  153 (255)
                         +++|++||+||....     +.+.+++++.+++|+.++.++++++.+..  .++||++||...+.           +
T Consensus        75 ---~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~--~~~~v~~SS~~vyg~~~~~~~~E~~~  144 (337)
T 1r6d_A           75 ---RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVYGSIDSGSWTESSP  144 (337)
T ss_dssp             ---TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGCCCSSSCBCTTSC
T ss_pred             ---cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecchHHhCCCCCCCCCCCCC
Confidence               389999999996431     12334567889999999999999998763  35999999976542           3


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcc---------cCCCCCHHH
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL---------LNRLGTTRD  224 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d  224 (255)
                      ..+...|+.+|.+.+.+++.++.++  +++++.++|+.+.++..........+........+         ...+..++|
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~~--g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  222 (337)
T 1r6d_A          145 LEPNSPYAASKAGSDLVARAYHRTY--GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDD  222 (337)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHH--CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHH
Confidence            4457789999999999999999887  78999999999988764211000111122211111         123557899


Q ss_pred             HHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          225 MAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       225 ~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++++.+++...   .+|+++++++|...
T Consensus       223 va~a~~~~~~~~---~~g~~~~v~~~~~~  248 (337)
T 1r6d_A          223 HCRGIALVLAGG---RAGEIYHIGGGLEL  248 (337)
T ss_dssp             HHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             HHHHHHHHHhCC---CCCCEEEeCCCCCc
Confidence            999999888643   36899999998754

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.92  E-value=1.3e-25  Score=187.38  Aligned_cols=216  Identities=19%  Similarity=0.055  Sum_probs=160.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |+||||||+|+||++++++|+++|++|++++|+.+.....      ....+.++.+|+++.+ +.++++       . |+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~-~~~~~~-------~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF------VNPSAELHVRDLKDYS-WGAGIK-------G-DV   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG------SCTTSEEECCCTTSTT-TTTTCC-------C-SE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh------cCCCceEEECccccHH-HHhhcC-------C-CE
Confidence            5799999999999999999999999999999986543221      1356788999999987 665543       3 99


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------CCCCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~  161 (255)
                      +||+||...     ...+.++++..+++|+.++.++++++...  ..+++|++||...+.           +..+...|+
T Consensus        66 vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~  138 (312)
T 3ko8_A           66 VFHFAANPE-----VRLSTTEPIVHFNENVVATFNVLEWARQT--GVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYG  138 (312)
T ss_dssp             EEECCSSCS-----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             EEECCCCCC-----chhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHH
Confidence            999999643     22344557888999999999999988654  345999999987652           344578899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhh-c---------ccCCCCCHHHHHHHHHH
Q 025273          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN-T---------LLNRLGTTRDMAAAAAF  231 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~d~a~~~~~  231 (255)
                      .+|.+.+.+++.++.++  +++++.++|+.+.++....... ..+....... .         ....++.++|+++++++
T Consensus       139 ~sK~~~e~~~~~~~~~~--g~~~~~lrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  215 (312)
T 3ko8_A          139 AAKAAGEVMCATYARLF--GVRCLAVRYANVVGPRLRHGVI-YDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLA  215 (312)
T ss_dssp             HHHHHHHHHHHHHHHHH--CCEEEEEEECEEECTTCCSSHH-HHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh--CCCEEEEeeccccCcCCCCChH-HHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHH
Confidence            99999999999999998  7999999999999986432110 1111111111 1         11235569999999999


Q ss_pred             hcCC-CCCCccccEEEeCCCccc
Q 025273          232 LASD-DASYITGETLVVAGGMPS  253 (255)
Q Consensus       232 l~s~-~~~~~~G~~i~~dgG~~~  253 (255)
                      +++. ......|+++++.+|...
T Consensus       216 ~~~~~~~~~~~~~~~ni~~~~~~  238 (312)
T 3ko8_A          216 AWKKFEEMDAPFLALNVGNVDAV  238 (312)
T ss_dssp             HHHHHHHSCCSEEEEEESCSSCE
T ss_pred             HHHhccccCCCCcEEEEcCCCce
Confidence            8865 112246899999988654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.92  E-value=2.3e-24  Score=182.52  Aligned_cols=229  Identities=14%  Similarity=0.056  Sum_probs=161.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh------HHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN------VDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +|+||||||+|+||++++++|+++|++|++++|+...      .....+++.. .+.++.++++|+++.+++++++++. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            4789999999999999999999999999999986432      1122223322 2457888999999999988887653 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------  153 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------  153 (255)
                          ++|+|||+||.... .    .+.+++++.+++|+.++.++++++...  ..+++|++||...+..           
T Consensus        81 ----~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~E~~~  149 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAV-G----ESVQKPLDYYRVNLTGTIQLLEIMKAH--GVKNLVFSSSATVYGNPQYLPLDEAHP  149 (348)
T ss_dssp             ----CEEEEEECCSCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             ----CCCEEEECCCCcCc-c----chhhchHHHHHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCCCCCCcCCCCC
Confidence                79999999997531 1    134557889999999999999987653  3469999999876531           


Q ss_pred             CCC-ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC------ChhHH----HHHH-hhc-------
Q 025273          154 QSS-MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS------NDGVR----QTIE-QNT-------  214 (255)
Q Consensus       154 ~~~-~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~------~~~~~----~~~~-~~~-------  214 (255)
                      ..+ ...|+.+|.+.+.+++.++.+ ++++++..+.|+.+..+.......      ...+.    .... ...       
T Consensus       150 ~~p~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  228 (348)
T 1ek6_A          150 TGGCTNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGN  228 (348)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECS
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCC
Confidence            223 678999999999999999988 557999999999887663211000      01111    1111 111       


Q ss_pred             --------ccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          215 --------LLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       215 --------~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                              ....++.++|++++++.++........++++++.+|...
T Consensus       229 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~  275 (348)
T 1ek6_A          229 DYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (348)
T ss_dssp             CSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             cccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCc
Confidence                    112356789999999888754321122489999887654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.92  E-value=1.9e-24  Score=185.44  Aligned_cols=219  Identities=15%  Similarity=0.060  Sum_probs=163.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .++|+||||||+|+||++++++|+++|++|++++|+.......      ...++.++++|+++.++++++++       +
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVTE-------G   93 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHHT-------T
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHhC-------C
Confidence            3568999999999999999999999999999999986542211      12367788999999999888764       7


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------------
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------------  152 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------------  152 (255)
                      +|++||+||.... ..+   ..+++++.+++|+.++.++++++.+.  ..+++|++||...+.                 
T Consensus        94 ~d~Vih~A~~~~~-~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~  167 (379)
T 2c5a_A           94 VDHVFNLAADMGG-MGF---IQSNHSVIMYNNTMISFNMIEAARIN--GIKRFFYASSACIYPEFKQLETTNVSLKESDA  167 (379)
T ss_dssp             CSEEEECCCCCCC-HHH---HTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGG
T ss_pred             CCEEEECceecCc-ccc---cccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeehheeCCCCCCCccCCCcCcccC
Confidence            9999999997531 111   12346788999999999999998754  235999999976543                 


Q ss_pred             -CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC----hhHHHHHHhhc----------ccC
Q 025273          153 -PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN----DGVRQTIEQNT----------LLN  217 (255)
Q Consensus       153 -~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~----------~~~  217 (255)
                       +..+...|+.+|.+.+.+++.++.++  +++++.++||.+.++........    ..+........          ...
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  245 (379)
T 2c5a_A          168 WPAEPQDAFGLEKLATEELCKHYNKDF--GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTR  245 (379)
T ss_dssp             SSBCCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHH--CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeE
Confidence             33456789999999999999998887  79999999999998764321111    11222221111          122


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          218 RLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       218 ~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .+..++|+++++++++...    .++.+++.+|...
T Consensus       246 ~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~  277 (379)
T 2c5a_A          246 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  277 (379)
T ss_dssp             CCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             EEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCcc
Confidence            4567999999999988654    4678999988654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.92  E-value=3.6e-24  Score=180.71  Aligned_cols=215  Identities=17%  Similarity=0.099  Sum_probs=151.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +++|+||||||+|+||++++++|+++|++|+++.|+.+..+.... +...   ..++.++++|+++.++++++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            367999999999999999999999999999999998765433322 1111   1368889999999998887765     


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC------------
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ------------  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~------------  154 (255)
                        .+|++||+|+...    +...++  .++.+++|+.++.++++++.+.. ..++||++||..+..+.            
T Consensus        77 --~~d~Vih~A~~~~----~~~~~~--~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS~~~~~~~~~~~~~~~E~~~  147 (337)
T 2c29_D           77 --GCTGVFHVATPMD----FESKDP--ENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSSAGTVNIQEHQLPVYDESCW  147 (337)
T ss_dssp             --TCSEEEECCCCCC----SSCSSH--HHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECCGGGTSCSSSCCSEECTTCC
T ss_pred             --CCCEEEEeccccC----CCCCCh--HHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeeeHhhcccCCCCCcccCcccC
Confidence              6899999998642    111222  35688999999999999988754 24699999998743211            


Q ss_pred             ----------CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHH---H------Hhhcc
Q 025273          155 ----------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQT---I------EQNTL  215 (255)
Q Consensus       155 ----------~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~---~------~~~~~  215 (255)
                                ++...|+.+|.+.+.+++.++.+.  +++++.++|+.+.+|....... ......   .      .....
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~g~~~~~~~~~  224 (337)
T 2c29_D          148 SDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN--NIDFITIIPTLVVGPFIMSSMP-PSLITALSPITGNEAHYSIIR  224 (337)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEECEEESCCSCSSCC-HHHHHHTHHHHTCGGGHHHHT
T ss_pred             CchhhhcccCCccchHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCceECCCCCCCCC-chHHHHHHHHcCCCccccccC
Confidence                      123469999999999998887665  7999999999999986432211 111110   0      00012


Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          216 LNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       216 ~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      ..+++.++|++++++++++...  ..|..
T Consensus       225 ~~~~i~v~Dva~a~~~~~~~~~--~~~~~  251 (337)
T 2c29_D          225 QGQFVHLDDLCNAHIYLFENPK--AEGRY  251 (337)
T ss_dssp             EEEEEEHHHHHHHHHHHHHCTT--CCEEE
T ss_pred             CCCEEEHHHHHHHHHHHhcCcc--cCceE
Confidence            2347899999999999886432  34554

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.92  E-value=9.3e-24  Score=181.95  Aligned_cols=172  Identities=20%  Similarity=0.125  Sum_probs=136.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHH-HcCCeEEEEeCCchh---------HHHHHHHHHhcC-----Ce---EEEEEecCCCH
Q 025273           12 GKVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQKN---------VDEAVVKLKARG-----IE---VIGVVCHVSNG   73 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~-~~G~~V~~~~r~~~~---------~~~~~~~~~~~~-----~~---~~~~~~Dv~~~   73 (255)
                      +++||||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.+....     .+   +.++.+|+++.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4689999999999999999999 999999999997654         344433333321     23   88899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC
Q 025273           74 QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP  153 (255)
Q Consensus        74 ~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~  153 (255)
                      +++++++++    ++++|+|||+||.....     .+.+++++.+++|+.+++++++++...  ..++||++||...+..
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~-----~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~iv~~SS~~v~g~  150 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG-----ESVRDPLKYYDNNVVGILRLLQAMLLH--KCDKIIFSSSAAIFGN  150 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGTBS
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC-----cchhhHHHHHHHHhHHHHHHHHHHHHh--CCCEEEEECCHHHhCC
Confidence            998887763    45699999999975311     134567889999999999999987653  3469999999765532


Q ss_pred             CC------------------CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCc
Q 025273          154 QS------------------SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (255)
Q Consensus       154 ~~------------------~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~  196 (255)
                      ..                  +...|+.+|.+.+.+++.++.++  +++++.++|+.+..+.
T Consensus       151 ~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY--GIKGICLRYFNACGAH  209 (397)
T ss_dssp             CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECCC
T ss_pred             CCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH--CCcEEEEeccceeCCC
Confidence            22                  36789999999999999999988  7999999999998764

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.92  E-value=4e-25  Score=184.66  Aligned_cols=213  Identities=16%  Similarity=0.119  Sum_probs=156.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |+||||||+|+||++++++|+++|..|++..|+....+.       ....+.++.+|+++ +++.++++       ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~   66 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYLK-------GAEE   66 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHHT-------TCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHhc-------CCCE
Confidence            479999999999999999999999555555555433221       13578889999998 88777765       7999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-----------CCCCCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQSSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-----------~~~~~~~~y~  161 (255)
                      +||+|+...     ...+.+++++.+++|+.++.++++++...  ..+++|++||...+           .+..+...|+
T Consensus        67 vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~  139 (313)
T 3ehe_A           67 VWHIAANPD-----VRIGAENPDEIYRNNVLATYRLLEAMRKA--GVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYG  139 (313)
T ss_dssp             EEECCCCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             EEECCCCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHH
Confidence            999999542     22344557889999999999999987653  34699999998765           2445678899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhh-c---------ccCCCCCHHHHHHHHHH
Q 025273          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN-T---------LLNRLGTTRDMAAAAAF  231 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~d~a~~~~~  231 (255)
                      .+|.+.+.+++.++.++  +++++.+.|+.+.++...... ...+....... .         ....++.++|+++++.+
T Consensus       140 ~sK~~~e~~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  216 (313)
T 3ehe_A          140 ASKLACEALIESYCHTF--DMQAWIYRFANVIGRRSTHGV-IYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLF  216 (313)
T ss_dssp             HHHHHHHHHHHHHHHHT--TCEEEEEECSCEESTTCCCSH-HHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhc--CCCEEEEeeccccCcCCCcCh-HHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHH
Confidence            99999999999999987  789999999999887543110 01111111111 1         12246678999999999


Q ss_pred             hcCCCCCCccccEEEeCCCccc
Q 025273          232 LASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++.+.   ..|+++++.+|...
T Consensus       217 ~~~~~---~~~~~~ni~~~~~~  235 (313)
T 3ehe_A          217 GLRGD---ERVNIFNIGSEDQI  235 (313)
T ss_dssp             HTTCC---SSEEEEECCCSCCE
T ss_pred             HhccC---CCCceEEECCCCCe
Confidence            99733   35889999998654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.92  E-value=1.2e-24  Score=220.44  Aligned_cols=177  Identities=18%  Similarity=0.211  Sum_probs=140.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhH---HHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNV---DEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+|++|||||++|||++++++|+++|++ |++++|+....   +...+++...+.++.+++||+++.++++++++++. .
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            5899999999999999999999999997 88889986543   34455555567899999999999999999999986 4


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+.+.+.|++.++||++||.++..+.+++..|+++|++
T Consensus      1962 ~g~id~lVnnAgv~~-~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaa 2040 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLR-DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSA 2040 (2512)
T ss_dssp             HSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHH
T ss_pred             cCCCcEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHH
Confidence            899999999999875 5778899999999999999999999999999988777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeeEEEEeCCcc
Q 025273          167 LLGLTKALAAEMAPDTRVNCVAPGFV  192 (255)
Q Consensus       167 ~~~l~~~la~e~~~~v~v~~v~pg~v  192 (255)
                      +.+|+++.+.+   |+...++..|.+
T Consensus      2041 l~~l~~~rr~~---Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2041 MERICEKRRHD---GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHT---TSCCCEEEECCB
T ss_pred             HHHHHHHHHHC---CCcEEEEEccCc
Confidence            99999987765   555556665544

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.92  E-value=2.7e-23  Score=177.54  Aligned_cols=226  Identities=16%  Similarity=0.062  Sum_probs=153.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHH-HHHHHHHh----cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-EAVVKLKA----RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+..    .+.++.++++|+++.++++++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            378999999999999999999999999999999865421 11111111    1357888999999999999988865   


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCC-----------C
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQP-----------Q  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~-----------~  154 (255)
                        ++|++||+||....     ..+.+++++.+++|+.++.++++++.+... +.+++|++||...+..           .
T Consensus        78 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~  150 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (372)
T ss_dssp             --CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             --CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCC
Confidence              79999999997542     123345678899999999999999987653 2369999999865532           2


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC---hhHHHHHHhh----------cccCCCCC
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN---DGVRQTIEQN----------TLLNRLGT  221 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~----------~~~~~~~~  221 (255)
                      .+...|+.+|++.+.+++.++.++  ++.+..+.|..+..+........   ..........          .....+..
T Consensus       151 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~  228 (372)
T 1db3_A          151 YPRSPYAVAKLYAYWITVNYRESY--GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH  228 (372)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh--CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeE
Confidence            346789999999999999999887  44544555544433321100000   0111111111          01123667


Q ss_pred             HHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          222 TRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       222 ~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .+|++++++.++....    ++.+++.+|...
T Consensus       229 v~Dva~a~~~~~~~~~----~~~~ni~~~~~~  256 (372)
T 1db3_A          229 AKDYVKMQWMMLQQEQ----PEDFVIATGVQY  256 (372)
T ss_dssp             HHHHHHHHHHTTSSSS----CCCEEECCCCCE
T ss_pred             HHHHHHHHHHHHhcCC----CceEEEcCCCce
Confidence            8999999998886542    467888877643

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.92  E-value=6.7e-24  Score=181.99  Aligned_cols=224  Identities=17%  Similarity=0.094  Sum_probs=156.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-----HHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-----VDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      |+||||||+|+||++++++|+++|++|++++|+.+.     ++.+.+.....+. ++.++.+|+++.++++++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999998653     2222222211123 7888999999999999988866   


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccC----------C
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQ----------P  153 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~----------~  153 (255)
                        ++|+|||+||....     ..+.++++..+++|+.++.++++++.+...+   .+++|++||...+.          +
T Consensus       106 --~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~  178 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  178 (381)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             --CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence              79999999997431     1234567889999999999999999887532   46999999987553          3


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCCC----eeEEEEeCCcccCCccccccCChhHHHHHHhh----------cccCCC
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAPD----TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN----------TLLNRL  219 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~~----v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~----------~~~~~~  219 (255)
                      ..+...|+.+|.+.+.+++.++.+++-.    ..++.+.||...+.....+   ..........          .....+
T Consensus       179 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~---~~~~~~~~~g~~~~~~~g~~~~~~~~  255 (381)
T 1n7h_A          179 FHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKI---TRALGRIKVGLQTKLFLGNLQASRDW  255 (381)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHH---HHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHH---HHHHHHHHcCCCCeEEeCCCCceeee
Confidence            4557789999999999999999887421    1223334443222110000   0111111111          112246


Q ss_pred             CCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          220 GTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       220 ~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +.++|++++++++++...    ++.+++.+|...
T Consensus       256 v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~  285 (381)
T 1n7h_A          256 GFAGDYVEAMWLMLQQEK----PDDYVVATEEGH  285 (381)
T ss_dssp             EEHHHHHHHHHHHHTSSS----CCEEEECCSCEE
T ss_pred             EEHHHHHHHHHHHHhCCC----CCeEEeeCCCCC
Confidence            789999999999987643    478999888654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.92  E-value=6.4e-25  Score=175.17  Aligned_cols=208  Identities=12%  Similarity=-0.001  Sum_probs=154.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||+|+||++++++|+++|++|++++|+.+..+..       ...+.++++|+++.++++++++       .+|+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   70 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCK-------GADA   70 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHT-------TCSE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHhc-------CCCE
Confidence            6899999999999999999999999999999997654321       2578999999999999888876       6999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC----------CCCChhhHh
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP----------QSSMAMYGV  162 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~----------~~~~~~y~~  162 (255)
                      +||+||....           ..+.+++|+.++.++++++.+.-  .+++|++||..++.+          ..+...|+.
T Consensus        71 vi~~a~~~~~-----------~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~  137 (227)
T 3dhn_A           71 VISAFNPGWN-----------NPDIYDETIKVYLTIIDGVKKAG--VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPG  137 (227)
T ss_dssp             EEECCCC-----------------CCSHHHHHHHHHHHHHHHTT--CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHH
T ss_pred             EEEeCcCCCC-----------ChhHHHHHHHHHHHHHHHHHHhC--CCEEEEeCChhhccCCCCCccccCCcchHHHHHH
Confidence            9999986421           11267889999999999887642  359999999876532          235778999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      +|.+.+.+.+.++.+.  +++++.++||.+.++......-.......... .....+..++|+|+.+..++..+.  ..|
T Consensus       138 sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~i~~~Dva~ai~~~l~~~~--~~g  212 (227)
T 3dhn_A          138 VKALGEFYLNFLMKEK--EIDWVFFSPAADMRPGVRTGRYRLGKDDMIVD-IVGNSHISVEDYAAAMIDELEHPK--HHQ  212 (227)
T ss_dssp             HHHHHHHHHHTGGGCC--SSEEEEEECCSEEESCCCCCCCEEESSBCCCC-TTSCCEEEHHHHHHHHHHHHHSCC--CCS
T ss_pred             HHHHHHHHHHHHhhcc--CccEEEEeCCcccCCCccccceeecCCCcccC-CCCCcEEeHHHHHHHHHHHHhCcc--ccC
Confidence            9999999998877644  89999999999987643211100000000000 001335689999999999987654  468


Q ss_pred             cEEEeCCCcc
Q 025273          243 ETLVVAGGMP  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      +++++.+..+
T Consensus       213 ~~~~~~~~~~  222 (227)
T 3dhn_A          213 ERFTIGYLEH  222 (227)
T ss_dssp             EEEEEECCSC
T ss_pred             cEEEEEeehh
Confidence            9999887654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.91  E-value=4.1e-24  Score=179.06  Aligned_cols=215  Identities=16%  Similarity=0.085  Sum_probs=147.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeC-Cchh---HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSR-KQKN---VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r-~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ||+||||||+|+||++++++|+++|++|+++.| +.+.   .+.+ .++.....++.++++|+++.++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            589999999999999999999999999999998 5432   1111 1111001267888999999999888765      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHH-HHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCC-----------
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESV-LDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS-----------  155 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~-----------  155 (255)
                       .+|+|||+|+...       .+.++ +++.+++|+.|++++++++.+.. ..++||++||..+..+.+           
T Consensus        74 -~~d~vih~A~~~~-------~~~~~~~~~~~~~nv~gt~~l~~aa~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~e~~~  144 (322)
T 2p4h_X           74 -GCVGIFHTASPID-------FAVSEPEEIVTKRTVDGALGILKACVNSK-TVKRFIYTSSGSAVSFNGKDKDVLDESDW  144 (322)
T ss_dssp             -TCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTCS-SCCEEEEEEEGGGTSCSSSCCSEECTTCC
T ss_pred             -CCCEEEEcCCccc-------CCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccHHHcccCCCCCeecCCccc
Confidence             6899999996421       11111 35689999999999999998763 346999999987532111           


Q ss_pred             ----------CC-hhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHH---HHHh-hccc--C-
Q 025273          156 ----------SM-AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQ---TIEQ-NTLL--N-  217 (255)
Q Consensus       156 ----------~~-~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~---~~~~-~~~~--~-  217 (255)
                                +. ..|+.+|.+.+.+++.++.+.  +++++.++|+.+.++....... .....   .... ....  . 
T Consensus       145 ~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~lrp~~v~g~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~  221 (322)
T 2p4h_X          145 SDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQN--GIDVVTLILPFIVGRFVCPKLP-DSIEKALVLVLGKKEQIGVTR  221 (322)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEECEEESCCCSSSCC-HHHHHHTHHHHSCGGGCCEEE
T ss_pred             cchhhhcccCcccccHHHHHHHHHHHHHHHHHhc--CCcEEEEcCCceECCCCCCCCC-chHHHHHHHHhCCCccCcCCC
Confidence                      01 169999999998888777654  7999999999999986542211 11110   0110 0011  1 


Q ss_pred             -CCCCHHHHHHHHHHhcCCCCCCccccEEEeC
Q 025273          218 -RLGTTRDMAAAAAFLASDDASYITGETLVVA  248 (255)
Q Consensus       218 -~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                       .++.++|+|++++++++...  .+|+ +++.
T Consensus       222 ~~~i~v~Dva~a~~~~~~~~~--~~g~-~~~~  250 (322)
T 2p4h_X          222 FHMVHVDDVARAHIYLLENSV--PGGR-YNCS  250 (322)
T ss_dssp             EEEEEHHHHHHHHHHHHHSCC--CCEE-EECC
T ss_pred             cCEEEHHHHHHHHHHHhhCcC--CCCC-EEEc
Confidence             36789999999999986532  5676 5543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=2.5e-23  Score=178.02  Aligned_cols=225  Identities=15%  Similarity=0.052  Sum_probs=157.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-----HHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-----VDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      |+||||||+|+||++++++|+++|++|++++|+.+.     ++.+.+.... ...++.++++|+++.++++++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999998643     2221111110 2347888999999999999988866   


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccC-----------CC
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQ-----------PQ  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~-----------~~  154 (255)
                        ++|+|||+||....     ..+.+++++.+++|+.++.++++++.+... +.++||++||...+.           +.
T Consensus       102 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~  174 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPF  174 (375)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCC
T ss_pred             --CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCC
Confidence              79999999996431     123456788999999999999999987653 236999999987654           23


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC---hhHHHHHHhhc----------ccCCCCC
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN---DGVRQTIEQNT----------LLNRLGT  221 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~----------~~~~~~~  221 (255)
                      .+...|+.+|++.+.+++.++.++  ++.+..+.|..+..|........   ...........          ....+..
T Consensus       175 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~  252 (375)
T 1t2a_A          175 YPRSPYGAAKLYAYWIVVNFREAY--NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH  252 (375)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEE
Confidence            356789999999999999999887  56666677766555432110000   01111111110          1123567


Q ss_pred             HHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          222 TRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       222 ~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++|++++++.++....    ++.+++.+|...
T Consensus       253 v~Dva~a~~~~~~~~~----~~~~ni~~~~~~  280 (375)
T 1t2a_A          253 AKDYVEAMWLMLQNDE----PEDFVIATGEVH  280 (375)
T ss_dssp             HHHHHHHHHHHHHSSS----CCCEEECCSCCE
T ss_pred             HHHHHHHHHHHHhcCC----CceEEEeCCCcc
Confidence            9999999998886543    366888777543

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=3.9e-24  Score=171.85  Aligned_cols=189  Identities=12%  Similarity=0.144  Sum_probs=132.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ..|+||||||+|+||++++++|+++| ++|++++|+.+.++..      ....+.++++|+++.++++++++       .
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~-------~   88 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ-------G   88 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc-------C
Confidence            35789999999999999999999999 8999999998754321      13478899999999999988876       6


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCC-----------
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSS-----------  156 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~-----------  156 (255)
                      +|+||||+|...            +.           ...+.+++.++  +.++||++||..++.+.+.           
T Consensus        89 ~D~vv~~a~~~~------------~~-----------~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~  145 (236)
T 3qvo_A           89 QDIVYANLTGED------------LD-----------IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIG  145 (236)
T ss_dssp             CSEEEEECCSTT------------HH-----------HHHHHHHHHHHHTTCCEEEEECCCCC----------------C
T ss_pred             CCEEEEcCCCCc------------hh-----------HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhccc
Confidence            899999998521            11           12334555554  3469999999887654433           


Q ss_pred             --ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          157 --MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       157 --~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                        ...|..+|..+        .  ..+++++.|+||++.++........      .......++++.++|+|+.++++++
T Consensus       146 ~~~~~~~~~~~~l--------~--~~gi~~~~vrPg~i~~~~~~~~~~~------~~~~~~~~~~i~~~DvA~~i~~ll~  209 (236)
T 3qvo_A          146 EPLKPFRRAADAI--------E--ASGLEYTILRPAWLTDEDIIDYELT------SRNEPFKGTIVSRKSVAALITDIID  209 (236)
T ss_dssp             GGGHHHHHHHHHH--------H--TSCSEEEEEEECEEECCSCCCCEEE------CTTSCCSCSEEEHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHH--------H--HCCCCEEEEeCCcccCCCCcceEEe------ccCCCCCCcEECHHHHHHHHHHHHc
Confidence              12233332221        1  2289999999999988754322110      0111123567899999999999998


Q ss_pred             CCCCCccccEEEeCCCcc
Q 025273          235 DDASYITGETLVVAGGMP  252 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~  252 (255)
                      ++..++ |+.+.++++.+
T Consensus       210 ~~~~~~-g~~~~i~~~~~  226 (236)
T 3qvo_A          210 KPEKHI-GENIGINQPGT  226 (236)
T ss_dssp             STTTTT-TEEEEEECSSC
T ss_pred             Cccccc-CeeEEecCCCC
Confidence            877655 88999988764

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.91  E-value=2.3e-23  Score=175.51  Aligned_cols=226  Identities=13%  Similarity=-0.008  Sum_probs=158.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHH-HHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      -.+++||||||+|+||++++++|+++|++|++++|+.+... ...+.+. ...++.++.+|+++.++++++++.+     
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   85 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA-----   85 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc-----
Confidence            34789999999999999999999999999999999865421 1111111 2347888999999999999988765     


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------CCCC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSM  157 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~  157 (255)
                      ++|++||+||....     ..+.+++++.+++|+.++.++++++.+.- ..+++|++||...+.+           ..+.
T Consensus        86 ~~d~Vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~  159 (335)
T 1rpn_A           86 QPQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQAERQDENTPFYPR  159 (335)
T ss_dssp             CCSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             CCCEEEECccccch-----hhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCCCCCCCCcccCCCCC
Confidence            79999999996431     11123467889999999999999987642 1269999999866532           2235


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC---hhHHHHHHhhc-c---------cCCCCCHHH
Q 025273          158 AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN---DGVRQTIEQNT-L---------LNRLGTTRD  224 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~-~---------~~~~~~~~d  224 (255)
                      ..|+.+|.+.+.+++.++.++  ++++..+.|+.+..+........   ........... +         ...+...+|
T Consensus       160 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~D  237 (335)
T 1rpn_A          160 SPYGVAKLYGHWITVNYRESF--GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD  237 (335)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHc--CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHH
Confidence            689999999999999999887  56777788887766543211000   01111111111 1         112557799


Q ss_pred             HHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          225 MAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       225 ~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++++..++....    ++.+++.+|...
T Consensus       238 va~a~~~~~~~~~----~~~~ni~~~~~~  262 (335)
T 1rpn_A          238 YVEAMWLMLQQDK----ADDYVVATGVTT  262 (335)
T ss_dssp             HHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             HHHHHHHHHhcCC----CCEEEEeCCCCc
Confidence            9999998886543    367888877643

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.91  E-value=8e-24  Score=172.99  Aligned_cols=192  Identities=15%  Similarity=0.127  Sum_probs=148.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||+|+||++++++|+++|++|++++|+.....         ...+.++++|+++.++++++++       .+|+
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   66 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK-------DCDG   66 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT-------TCSE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc-------CCCE
Confidence            68999999999999999999999999999999875311         1357888999999999888765       6999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCC------------CChhh
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS------------SMAMY  160 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~------------~~~~y  160 (255)
                      +||+||...         .+.+++.+++|+.++.++++++.+.  ..++||++||..++.+.+            +...|
T Consensus        67 vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y  135 (267)
T 3ay3_A           67 IIHLGGVSV---------ERPWNDILQANIIGAYNLYEAARNL--GKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLY  135 (267)
T ss_dssp             EEECCSCCS---------CCCHHHHHHHTHHHHHHHHHHHHHT--TCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHH
T ss_pred             EEECCcCCC---------CCCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChH
Confidence            999999752         1236788999999999999998763  346999999987654322            45789


Q ss_pred             HhhHHHHHHHHHHHHHHhCCCeeEEEEeCCccc-CCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVP-THFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +.+|.+.+.+++.++.+.  +++++.++||.+. ++.      ...         ....+..++|+++.+..++..... 
T Consensus       136 ~~sK~~~e~~~~~~~~~~--gi~~~~lrp~~v~~~~~------~~~---------~~~~~~~~~dva~~~~~~~~~~~~-  197 (267)
T 3ay3_A          136 GLSKCFGEDLASLYYHKF--DIETLNIRIGSCFPKPK------DAR---------MMATWLSVDDFMRLMKRAFVAPKL-  197 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTT--CCCEEEEEECBCSSSCC------SHH---------HHHHBCCHHHHHHHHHHHHHSSCC-
T ss_pred             HHHHHHHHHHHHHHHHHc--CCCEEEEeceeecCCCC------CCC---------eeeccccHHHHHHHHHHHHhCCCC-
Confidence            999999999999887654  7999999999974 332      111         012357899999999988865432 


Q ss_pred             ccccEEEeCCC
Q 025273          240 ITGETLVVAGG  250 (255)
Q Consensus       240 ~~G~~i~~dgG  250 (255)
                       .+..+++.++
T Consensus       198 -~~~~~~~~~~  207 (267)
T 3ay3_A          198 -GCTVVYGASA  207 (267)
T ss_dssp             -CEEEEEECCS
T ss_pred             -CceeEecCCC
Confidence             2345555444

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.91  E-value=1.4e-24  Score=181.42  Aligned_cols=211  Identities=17%  Similarity=0.108  Sum_probs=126.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|+||||||+|+||++++++|+++|++|++++|+.+.           . .  ++++|+++.++++++++..     ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~-----~~d   62 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF-----QPH   62 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH-----CCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh-----CCC
Confidence            5789999999999999999999999999999987543           0 1  6789999999998888765     799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC----------CCCChhhH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP----------QSSMAMYG  161 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~----------~~~~~~y~  161 (255)
                      ++||+||....     ..+.+++++.+++|+.++.++++++.+.   +.++|++||...+.+          ..+...|+
T Consensus        63 ~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~  134 (315)
T 2ydy_A           63 VIVHCAAERRP-----DVVENQPDAASQLNVDASGNLAKEAAAV---GAFLIYISSDYVFDGTNPPYREEDIPAPLNLYG  134 (315)
T ss_dssp             EEEECC------------------------CHHHHHHHHHHHHH---TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHH
T ss_pred             EEEECCcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEchHHHcCCCCCCCCCCCCCCCcCHHH
Confidence            99999997542     1245667889999999999999999864   349999999887644          45577899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHH-h-------hcccCCCCCHHHHHHHHHHhc
Q 025273          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIE-Q-------NTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      .+|.+.+.+++.++.++ ..+|.+.|. |+..++.. .+.  ..+..... .       ......+..++|+++++.+++
T Consensus       135 ~sK~~~e~~~~~~~~~~-~~lR~~~v~-G~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~  209 (315)
T 2ydy_A          135 KTKLDGEKAVLENNLGA-AVLRIPILY-GEVEKLEE-SAV--TVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLA  209 (315)
T ss_dssp             HHHHHHHHHHHHHCTTC-EEEEECSEE-CSCSSGGG-STT--GGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCe-EEEeeeeee-CCCCcccc-cHH--HHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHH
Confidence            99999999999875332 134555554 44443110 110  11111111 1       112345778999999999888


Q ss_pred             CCC-CCCccccEEEeCCCcccC
Q 025273          234 SDD-ASYITGETLVVAGGMPSR  254 (255)
Q Consensus       234 s~~-~~~~~G~~i~~dgG~~~~  254 (255)
                      +.. .....|+.+++.+|...+
T Consensus       210 ~~~~~~~~~~~~~~i~~~~~~s  231 (315)
T 2ydy_A          210 EKRMLDPSIKGTFHWSGNEQMT  231 (315)
T ss_dssp             HHHHTCTTCCEEEECCCSCCBC
T ss_pred             HhhccccCCCCeEEEcCCCccc
Confidence            542 112358899999987653

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.91  E-value=8e-24  Score=180.89  Aligned_cols=223  Identities=12%  Similarity=0.074  Sum_probs=164.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCC-CHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS-NGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~   85 (255)
                      ..+++|+||||||+|+||++++++|+++ |++|++++|+.+..+.+.     ...++.++++|++ +.+.++++++    
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~~d~~~~~~~~~----   90 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV-----KHERMHFFEGDITINKEWVEYHVK----   90 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG-----GSTTEEEEECCTTTCHHHHHHHHH----
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc-----cCCCeEEEeCccCCCHHHHHHHhc----
Confidence            3356789999999999999999999999 999999999976544321     1358899999999 9999888876    


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC-----------
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------  154 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------  154 (255)
                         ++|+|||+|+.....     ...++..+.+++|+.++.++++++...-   .++|++||...+...           
T Consensus        91 ---~~d~Vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~v~~SS~~vyg~~~~~~~~e~~~~  159 (372)
T 3slg_A           91 ---KCDVILPLVAIATPA-----TYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSEVYGMCADEQFDPDASA  159 (372)
T ss_dssp             ---HCSEEEECBCCCCHH-----HHHHCHHHHHHHHTTTTHHHHHHHHHHT---CEEEEECCGGGGBSCCCSSBCTTTCC
T ss_pred             ---cCCEEEEcCccccHH-----HHhhCHHHHHHHHHHHHHHHHHHHHHhC---CcEEEeCcHHHhCCCCCCCCCccccc
Confidence               589999999975411     1234466788999999999999887653   699999997654321           


Q ss_pred             -------CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC----Ch----hHHHHHHhhc-----
Q 025273          155 -------SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS----ND----GVRQTIEQNT-----  214 (255)
Q Consensus       155 -------~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~----~~----~~~~~~~~~~-----  214 (255)
                             .+...|+.+|.+.+.+++.++.+   ++++..+.|+.+..+.......    ..    .+........     
T Consensus       160 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (372)
T 3slg_A          160 LTYGPINKPRWIYACSKQLMDRVIWGYGME---GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLV  236 (372)
T ss_dssp             EEECCTTCTTHHHHHHHHHHHHHHHHHHTT---TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEG
T ss_pred             cccCCCCCCCCcHHHHHHHHHHHHHHHHHC---CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEe
Confidence                   24448999999999999998877   7899999999998876432110    11    1111111111     


Q ss_pred             ----ccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCC-Cccc
Q 025273          215 ----LLNRLGTTRDMAAAAAFLASDDASYITGETLVVAG-GMPS  253 (255)
Q Consensus       215 ----~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dg-G~~~  253 (255)
                          ....++.++|+++++..++........|+++++.+ |...
T Consensus       237 ~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~  280 (372)
T 3slg_A          237 DGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNF  280 (372)
T ss_dssp             GGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEE
T ss_pred             CCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCc
Confidence                11235678999999999987654335689999998 5543

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.91  E-value=4.5e-24  Score=180.38  Aligned_cols=219  Identities=17%  Similarity=0.148  Sum_probs=157.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcC-------CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-------ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      .+++|+||||||+|+||++++++|+++|       ++|++++|+.+....      ....++.++++|+++.++++++++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHHh
Confidence            3678999999999999999999999999       899999998653221      124578899999999999888775


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCC-C--
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQ-S--  155 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~-~--  155 (255)
                            +++|++||+||...      ..+.+++++.+++|+.++.++++++.+..+   ..++||++||...+.+. +  
T Consensus        85 ------~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~  152 (342)
T 2hrz_A           85 ------ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYP  152 (342)
T ss_dssp             ------TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSS
T ss_pred             ------cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCC
Confidence                  37999999999643      123466889999999999999999887542   14699999998776442 2  


Q ss_pred             --------CChhhHhhHHHHHHHHHHHHHHhCC---CeeEEEEe--CCcccCCccccccCChhHHHHHHhhc----ccCC
Q 025273          156 --------SMAMYGVTKTALLGLTKALAAEMAP---DTRVNCVA--PGFVPTHFAEYITSNDGVRQTIEQNT----LLNR  218 (255)
Q Consensus       156 --------~~~~y~~sK~a~~~l~~~la~e~~~---~v~v~~v~--pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~  218 (255)
                              +...|+.+|.+.+.+++.++.+..-   .+|++.+.  ||...++.....   ..+........    +...
T Consensus       153 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  229 (342)
T 2hrz_A          153 IPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFF---SNILREPLVGQEAVLPVPE  229 (342)
T ss_dssp             BCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHH---HHHHHHHHTTCCEEECSCT
T ss_pred             cCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHH---HHHHHHHhcCCCeeccCCC
Confidence                    5678999999999999999887532   46777776  887654321110   11111111111    1111


Q ss_pred             -----CCCHHHHHHHHHHhcCCCCC-CccccEEEeC
Q 025273          219 -----LGTTRDMAAAAAFLASDDAS-YITGETLVVA  248 (255)
Q Consensus       219 -----~~~~~d~a~~~~~l~s~~~~-~~~G~~i~~d  248 (255)
                           +..++|+++.++.++..... ...++++++.
T Consensus       230 ~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~  265 (342)
T 2hrz_A          230 SIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP  265 (342)
T ss_dssp             TCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC
T ss_pred             ccceeeEehHHHHHHHHHHHhccccccCCccEEEcC
Confidence                 45789999999888754321 0136778884

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.91  E-value=3.2e-23  Score=175.16  Aligned_cols=217  Identities=13%  Similarity=0.072  Sum_probs=158.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHhCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKFGKI   90 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~~   90 (255)
                      |+||||||+|+||++++++|+++ |++|++++|+.+..+.+.     ...++.++++|+++. +.++++++       ++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~-------~~   68 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-------KC   68 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH-------HC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc-------CC
Confidence            47999999999999999999998 899999999876543221     134788999999984 55666654       58


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCC---------------
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS---------------  155 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~---------------  155 (255)
                      |++||+||.....     ...+++++.+++|+.++.++++++.+.-   +++|++||...+....               
T Consensus        69 d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~  140 (345)
T 2bll_A           69 DVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (345)
T ss_dssp             SEEEECBCCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             CEEEEcccccCcc-----chhcCHHHHHHHHHHHHHHHHHHHHHhC---CeEEEEecHHHcCCCCCCCcCCcccccccCc
Confidence            9999999974310     1124567789999999999999887642   6999999976543211               


Q ss_pred             ---CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc----C-C---hhHHHHHHhhc---------c
Q 025273          156 ---SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT----S-N---DGVRQTIEQNT---------L  215 (255)
Q Consensus       156 ---~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~----~-~---~~~~~~~~~~~---------~  215 (255)
                         +...|+.+|.+.+.+++.++.+.  +++++.+.|+.+.++......    . .   ..+........         .
T Consensus       141 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  218 (345)
T 2bll_A          141 VNKPRWIYSVSKQLLDRVIWAYGEKE--GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ  218 (345)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCC
T ss_pred             ccCcccccHHHHHHHHHHHHHHHHhc--CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCE
Confidence               12379999999999999999887  789999999999887643211    0 1   11111111111         1


Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCc
Q 025273          216 LNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       216 ~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ...+..++|++++++.++........|+++++.+|.
T Consensus       219 ~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          219 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             EEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence            123678999999999998655333578999999884

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.91  E-value=3e-24  Score=182.59  Aligned_cols=220  Identities=15%  Similarity=0.180  Sum_probs=156.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++|+||||||+|+||++++++|+++| ++|++++|+.....  .+.+.    .+. +.+|+++.+.++.+++.  ..+
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~--~~~  113 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAG--EEF  113 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT----TSC-CSEEEEHHHHHHHHHTT--CCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc----Cce-EeeecCcHHHHHHHHhh--ccc
Confidence            4678999999999999999999999999 99999999865421  01111    112 67899998888877653  124


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCC-----------C
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS-----------S  156 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~-----------~  156 (255)
                      +++|++||+||....       +.+++++.+++|+.++.++++++.+.  +. ++|++||...+.+..           +
T Consensus       114 ~~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~--~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p  183 (357)
T 2x6t_A          114 GDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTSDFIESREYEKP  183 (357)
T ss_dssp             SSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGCSCSSCCCSSGGGCCC
T ss_pred             CCCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEcchHHhCCCCCCCcCCcCCCCC
Confidence            579999999997542       22346788999999999999998874  33 999999987654322           3


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC--C--hhHHHHHHhhc---------c-cCCCCCH
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS--N--DGVRQTIEQNT---------L-LNRLGTT  222 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~--~--~~~~~~~~~~~---------~-~~~~~~~  222 (255)
                      ...|+.+|.+.+.+++.++.++  +++++.+.|+.+.++.......  .  ..+........         . ...++.+
T Consensus       184 ~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  261 (357)
T 2x6t_A          184 LNVFGYSKFLFDEYVRQILPEA--NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYV  261 (357)
T ss_dssp             SSHHHHHHHHHHHHHHHHGGGC--SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEH
T ss_pred             CChhHHHHHHHHHHHHHHHHHc--CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEH
Confidence            6689999999999999988775  7899999999998875421100  0  11111111111         1 3346789


Q ss_pred             HHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          223 RDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       223 ~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|+|++++++++...    |+++++.+|...
T Consensus       262 ~Dva~ai~~~~~~~~----~~~~~i~~~~~~  288 (357)
T 2x6t_A          262 GDVADVNLWFLENGV----SGIFNLGTGRAE  288 (357)
T ss_dssp             HHHHHHHHHHHHHCC----CEEEEESCSCCE
T ss_pred             HHHHHHHHHHHhcCC----CCeEEecCCCcc
Confidence            999999999986543    789999988654

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.90  E-value=6e-23  Score=171.34  Aligned_cols=210  Identities=16%  Similarity=0.090  Sum_probs=156.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|+||||||+|+||++++++|+++|++|++++|+....+ +    .    .+.++++|++ .+++.++++       ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~----~----~~~~~~~Dl~-~~~~~~~~~-------~~d   64 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I----N----DYEYRVSDYT-LEDLINQLN-------DVD   64 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT-------TCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C----C----ceEEEEcccc-HHHHHHhhc-------CCC
Confidence            378999999999999999999999999999999944322 1    1    6788999999 888877765       799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------CCCCChhh
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMAMY  160 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y  160 (255)
                      ++||+|+.....         +.++.+++|+.++.++++++...-  .+++|++||...+.           +..+...|
T Consensus        65 ~Vih~a~~~~~~---------~~~~~~~~n~~~~~~ll~a~~~~~--~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  133 (311)
T 3m2p_A           65 AVVHLAATRGSQ---------GKISEFHDNEILTQNLYDACYENN--ISNIVYASTISAYSDETSLPWNEKELPLPDLMY  133 (311)
T ss_dssp             EEEECCCCCCSS---------SCGGGTHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHH
T ss_pred             EEEEccccCCCC---------ChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchh
Confidence            999999976522         234567899999999999887642  34899999976652           23346789


Q ss_pred             HhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcc---------cCCCCCHHHHHHHHHH
Q 025273          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL---------LNRLGTTRDMAAAAAF  231 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d~a~~~~~  231 (255)
                      +.+|.+.+.+++.++.+.  +++++.+.|+.+.++..........+........+         ...+...+|+++++..
T Consensus       134 ~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~  211 (311)
T 3m2p_A          134 GVSKLACEHIGNIYSRKK--GLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIY  211 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHS--CCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHc--CCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHH
Confidence            999999999999998875  78999999999988754321111112222211111         1134567899999999


Q ss_pred             hcCCCCCCccccEEEeCCCcccC
Q 025273          232 LASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ++....   .|+++++.+|...+
T Consensus       212 ~~~~~~---~~~~~~i~~~~~~s  231 (311)
T 3m2p_A          212 ALKQEK---VSGTFNIGSGDALT  231 (311)
T ss_dssp             HTTCTT---CCEEEEECCSCEEC
T ss_pred             HHhcCC---CCCeEEeCCCCccc
Confidence            997654   68999999887543

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.90  E-value=7.6e-23  Score=171.94  Aligned_cols=222  Identities=17%  Similarity=0.085  Sum_probs=160.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |+||||||+|+||++++++|+++|++|++++|+.....   +.   ...++.++++|+++.+++++++++     .++|+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~---~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   70 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DA---ITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEA   70 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GG---SCTTSEEEECCTTCHHHHHHHHHH-----SCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hh---cCCCcEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence            57999999999999999999999999999998754322   11   123677889999999998888765     37999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------CCCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~  161 (255)
                      +||+||....     ..+.+++++.+++|+.++.++++++...  +.+++|++||...+..           ..+...|+
T Consensus        71 vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~  143 (330)
T 2c20_A           71 VMHFAADSLV-----GVSMEKPLQYYNNNVYGALCLLEVMDEF--KVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYG  143 (330)
T ss_dssp             EEECCCCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHH
T ss_pred             EEECCcccCc-----cccccCHHHHHHHHhHHHHHHHHHHHHc--CCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHH
Confidence            9999997531     1134567889999999999999987653  3459999999876532           23467899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc-----CChhHHHHHHh----h-c---------------cc
Q 025273          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT-----SNDGVRQTIEQ----N-T---------------LL  216 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~-----~~~~~~~~~~~----~-~---------------~~  216 (255)
                      .+|.+.+.+++.++.++  +++++.+.|+.+.++......     ....+...+..    . .               ..
T Consensus       144 ~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  221 (330)
T 2c20_A          144 ETKLAIEKMLHWYSQAS--NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCI  221 (330)
T ss_dssp             HHHHHHHHHHHHHHHTS--SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCE
T ss_pred             HHHHHHHHHHHHHHHHh--CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCcee
Confidence            99999999999998876  799999999999877421111     01111111111    1 0               01


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          217 NRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       217 ~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ..+...+|+++++..++........++++++.+|...+
T Consensus       222 ~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s  259 (330)
T 2c20_A          222 RDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFS  259 (330)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBC
T ss_pred             EeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCcc
Confidence            13456899999998887542211236889998876543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.90  E-value=1.2e-22  Score=171.43  Aligned_cols=228  Identities=14%  Similarity=0.110  Sum_probs=152.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +++|||||+|+||++++++|+++|++|++++|.........+.+.. .+.++.++++|+++.++++++++..     ++|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            3699999999999999999999999999998753221111122222 1346788899999999988887652     699


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------CC-CCChh
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQ-SSMAM  159 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~-~~~~~  159 (255)
                      +|||+||.... .    ...++.++.+++|+.+++++++++...  ..++||++||...+.           +. ++...
T Consensus        76 ~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~  148 (338)
T 1udb_A           76 TVIHFAGLKAV-G----ESVQKPLEYYDNNVNGTLRLISAMRAA--NVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSP  148 (338)
T ss_dssp             EEEECCSCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred             EEEECCccCcc-c----cchhcHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccHHHhCCCCCCCcCcccCCCCCCCh
Confidence            99999996431 1    123446678999999999999876543  346999999987542           11 23678


Q ss_pred             hHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccc----cC--ChhHHHHH---Hh--hc--------------
Q 025273          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYI----TS--NDGVRQTI---EQ--NT--------------  214 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~----~~--~~~~~~~~---~~--~~--------------  214 (255)
                      |+.+|++.+.+++.++.+. +++++..+.|+.+..+.....    ..  ...+...+   ..  ..              
T Consensus       149 Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  227 (338)
T 1udb_A          149 YGKSKLMVEQILTDLQKAQ-PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG  227 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHS-TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHhc-CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCC
Confidence            9999999999999999885 367888888766554321000    00  01111111   11  00              


Q ss_pred             -ccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          215 -LLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       215 -~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                       ....++.++|++++++.++........++++++.+|...
T Consensus       228 ~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~  267 (338)
T 1udb_A          228 TGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGN  267 (338)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCE
T ss_pred             ceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCce
Confidence             011355789999998877643211123478999877643

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.90  E-value=4.1e-23  Score=170.77  Aligned_cols=199  Identities=17%  Similarity=0.149  Sum_probs=147.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..-..++||||||+|+||++++++|+++|++|++++|+                     ++|+++.++++++++..    
T Consensus         8 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~----   62 (292)
T 1vl0_A            8 HHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK----   62 (292)
T ss_dssp             ----CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH----
T ss_pred             cccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc----
Confidence            33456899999999999999999999999999999996                     27999999998888765    


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC-----------CC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------SS  156 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~  156 (255)
                       ++|++||+||....     +.+.+++++.+++|+.++.++++++.+.  . .++|++||...+.+.           .+
T Consensus        63 -~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~--~-~~iv~~SS~~v~~~~~~~~~~E~~~~~~  133 (292)
T 1vl0_A           63 -KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV--G-AEIVQISTDYVFDGEAKEPITEFDEVNP  133 (292)
T ss_dssp             -CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH--T-CEEEEEEEGGGSCSCCSSCBCTTSCCCC
T ss_pred             -CCCEEEECCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc--C-CeEEEechHHeECCCCCCCCCCCCCCCC
Confidence             79999999996431     1234567889999999999999998774  2 399999998765432           24


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhc-------ccCCCCCHHHHHHHH
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT-------LLNRLGTTRDMAAAA  229 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d~a~~~  229 (255)
                      ...|+.+|.+.+.+++.++.      .+..+.|+.+.++ ...+.  ..+........       ....+..++|+++++
T Consensus       134 ~~~Y~~sK~~~E~~~~~~~~------~~~~lR~~~v~G~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  204 (292)
T 1vl0_A          134 QSAYGKTKLEGENFVKALNP------KYYIVRTAWLYGD-GNNFV--KTMINLGKTHDELKVVHDQVGTPTSTVDLARVV  204 (292)
T ss_dssp             CSHHHHHHHHHHHHHHHHCS------SEEEEEECSEESS-SSCHH--HHHHHHHHHCSEEEEESSCEECCEEHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHhhCC------CeEEEeeeeeeCC-CcChH--HHHHHHHhcCCcEEeecCeeeCCccHHHHHHHH
Confidence            67899999999999987653      3566777777655 21110  11111111111       123466799999999


Q ss_pred             HHhcCCCCCCccccEEEeCCCccc
Q 025273          230 AFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       230 ~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .++++..    .|+.+++++|...
T Consensus       205 ~~~~~~~----~~~~~~i~~~~~~  224 (292)
T 1vl0_A          205 LKVIDEK----NYGTFHCTCKGIC  224 (292)
T ss_dssp             HHHHHHT----CCEEEECCCBSCE
T ss_pred             HHHHhcC----CCcEEEecCCCCc
Confidence            9998654    5889999988654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.90  E-value=4.5e-24  Score=180.12  Aligned_cols=217  Identities=16%  Similarity=0.133  Sum_probs=147.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH--HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA--VVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+|+||||||+|+||++++++|+++|++|+++.|+.+..+..  ...+. ...++.++++|+++.++++++++       
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------   79 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT-------
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc-------
Confidence            378999999999999999999999999999998886532211  11222 23468889999999988877765       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC---------CC-----
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ---------PQ-----  154 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~---------~~-----  154 (255)
                      .+|++||+|+...    +.  ..+..++.+++|+.|++++++++.+.. ..++||++||..+..         +.     
T Consensus        80 ~~D~Vih~A~~~~----~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~  152 (338)
T 2rh8_A           80 GCDFVFHVATPVH----FA--SEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSAAAVTINQLDGTGLVVDEKNW  152 (338)
T ss_dssp             TCSEEEEESSCCC----C-----------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCHHHHHHHHHTCSCCCCCTTTT
T ss_pred             CCCEEEEeCCccC----CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecHHHeecCCcCCCCcccChhhc
Confidence            6899999998542    11  111124588999999999999988764 245999999976311         00     


Q ss_pred             -------C---CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHH----------HHH---
Q 025273          155 -------S---SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQ----------TIE---  211 (255)
Q Consensus       155 -------~---~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~----------~~~---  211 (255)
                             +   ....|+.||.+.+.+++.++.+.  +++++.+.|+.+.+|....... .....          ...   
T Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~g~~~~~~~~~  229 (338)
T 2rh8_A          153 TDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN--NIDLITVIPTLMAGSSLTSDVP-SSIGLAMSLITGNEFLINGMK  229 (338)
T ss_dssp             TCC-------CCCCCCTTSCCHHHHHHHHHHHHH--TCCEEEEEECEEESCCSSSSCC-HHHHHHHHHHHTCHHHHHHHH
T ss_pred             cchhhccccCCccchHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCceECCCCCCCCC-chHHHHHHHHcCCcccccccc
Confidence                   0   11159999999999998887765  7999999999999986532211 10000          000   


Q ss_pred             hh-cccC--CCCCHHHHHHHHHHhcCCCCCCccccEEEeC
Q 025273          212 QN-TLLN--RLGTTRDMAAAAAFLASDDASYITGETLVVA  248 (255)
Q Consensus       212 ~~-~~~~--~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      .. ...+  .++.++|++++++++++...  ..|. +++.
T Consensus       230 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~-~~~~  266 (338)
T 2rh8_A          230 GMQMLSGSVSIAHVEDVCRAHIFVAEKES--ASGR-YICC  266 (338)
T ss_dssp             HHHHHHSSEEEEEHHHHHHHHHHHHHCTT--CCEE-EEEC
T ss_pred             ccccccCcccEEEHHHHHHHHHHHHcCCC--cCCc-EEEe
Confidence            00 0001  37799999999999886432  3455 4443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.89  E-value=6.4e-23  Score=173.47  Aligned_cols=221  Identities=13%  Similarity=0.042  Sum_probs=153.4

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +...+++++||||||+|+||++++++|+++|++|++++|+........+.+. ...++.++.+|+++..           
T Consensus        21 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~-----------   88 (343)
T 2b69_A           21 GHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL-----------   88 (343)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC-----------
T ss_pred             cccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh-----------
Confidence            3345778999999999999999999999999999999997542111111111 1347889999998752           


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-------------
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-------------  152 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-------------  152 (255)
                       +.++|+|||+||.... ...    .+++++.+++|+.++.++++++.+.   +.++|++||...+.             
T Consensus        89 -~~~~d~vih~A~~~~~-~~~----~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~v~g~~~~~~~~E~~~~  159 (343)
T 2b69_A           89 -YIEVDQIYHLASPASP-PNY----MYNPIKTLKTNTIGTLNMLGLAKRV---GARLLLASTSEVYGDPEVHPQSEDYWG  159 (343)
T ss_dssp             -CCCCSEEEECCSCCSH-HHH----TTCHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEEEGGGGBSCSSSSBCTTCCC
T ss_pred             -hcCCCEEEECccccCc-hhh----hhCHHHHHHHHHHHHHHHHHHHHHh---CCcEEEECcHHHhCCCCCCCCcccccc
Confidence             3579999999997431 100    1235678899999999999988764   24899999976542             


Q ss_pred             ---CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC--hhHHHHHHhhcc---------cCC
Q 025273          153 ---PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN--DGVRQTIEQNTL---------LNR  218 (255)
Q Consensus       153 ---~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~~  218 (255)
                         +..+...|+.+|.+.+.+++.++.+.  +++++.+.|+.+.++........  ..+........+         ...
T Consensus       160 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (343)
T 2b69_A          160 HVNPIGPRACYDEGKRVAETMCYAYMKQE--GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRA  237 (343)
T ss_dssp             BCCSSSTTHHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEE
T ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHh--CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEe
Confidence               33446689999999999999998877  78999999999988754211111  111122211111         123


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          219 LGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       219 ~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +..++|++++++.++....    ++.+++.+|...
T Consensus       238 ~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~  268 (343)
T 2b69_A          238 FQYVSDLVNGLVALMNSNV----SSPVNLGNPEEH  268 (343)
T ss_dssp             CEEHHHHHHHHHHHHTSSC----CSCEEESCCCEE
T ss_pred             eEeHHHHHHHHHHHHhcCC----CCeEEecCCCCC
Confidence            5688999999999886542    577899887653

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.89  E-value=1.6e-22  Score=184.93  Aligned_cols=220  Identities=13%  Similarity=0.067  Sum_probs=162.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHH-HHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ-RKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~   87 (255)
                      +++|+||||||+|+||++++++|+++ |++|++++|+....+...     ...++.++.+|+++.++ ++++++      
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~------  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc------
Confidence            46789999999999999999999998 899999999876543211     13578889999998765 555554      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC-------------
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-------------  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-------------  154 (255)
                       ++|++||+||.....     ...+++++.+++|+.++.++++++.+..   +++|++||...+.+.             
T Consensus       382 -~~D~Vih~Aa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~r~V~~SS~~vyg~~~~~~~~E~~~~~~  452 (660)
T 1z7e_A          382 -KCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPSTSEVYGMCSDKYFDEDHSNLI  452 (660)
T ss_dssp             -HCSEEEECCCCCCTH-----HHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECCGGGGBTCCSSSBCTTTCCEE
T ss_pred             -CCCEEEECceecCcc-----ccccCHHHHHHhhhHHHHHHHHHHHHhC---CEEEEEecHHHcCCCCCcccCCCccccc
Confidence             589999999975311     1234567889999999999999887642   699999997765221             


Q ss_pred             -----CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc------C--ChhHHHHHHhhcc------
Q 025273          155 -----SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT------S--NDGVRQTIEQNTL------  215 (255)
Q Consensus       155 -----~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~------~--~~~~~~~~~~~~~------  215 (255)
                           .+...|+.+|.+.+.+++.++.+.  +++++.++||.+.++......      .  ...+........+      
T Consensus       453 ~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  530 (660)
T 1z7e_A          453 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE--GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  530 (660)
T ss_dssp             ECCTTCTTHHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGG
T ss_pred             cCcccCCCCCcHHHHHHHHHHHHHHHHHc--CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCC
Confidence                 223479999999999999998887  789999999999887643210      0  0112222222211      


Q ss_pred             ---cCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCc
Q 025273          216 ---LNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       216 ---~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                         ...+..++|++++++++++......+|+++++++|.
T Consensus       531 g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          531 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             GCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence               123667999999999998765434578999999884

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.89  E-value=1.5e-22  Score=161.05  Aligned_cols=200  Identities=14%  Similarity=0.046  Sum_probs=138.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++||||||+|+||++++++|+++|++|++++|+.+.++.+      ....+.++++|+++.++         +.++++|+
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~~~D~~d~~~---------~~~~~~d~   65 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR------LGATVATLVKEPLVLTE---------ADLDSVDA   65 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------TCTTSEEEECCGGGCCH---------HHHTTCSE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc------cCCCceEEecccccccH---------hhcccCCE
Confidence            3599999999999999999999999999999997765432      13477889999999887         22358999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCC--------------Ch
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS--------------MA  158 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--------------~~  158 (255)
                      +||+||......            ...+|+.++.++++++...   ++++|++||..+..+.+.              ..
T Consensus        66 vi~~ag~~~~~~------------~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~  130 (224)
T 3h2s_A           66 VVDALSVPWGSG------------RGYLHLDFATHLVSLLRNS---DTLAVFILGSASLAMPGADHPMILDFPESAASQP  130 (224)
T ss_dssp             EEECCCCCTTSS------------CTHHHHHHHHHHHHTCTTC---CCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGST
T ss_pred             EEECCccCCCcc------------hhhHHHHHHHHHHHHHHHc---CCcEEEEecceeeccCCCCccccccCCCCCccch
Confidence            999999752110            1356777776666554432   379999999876543322              67


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      .|+.+|.+.+.+ +.+..+  .+++++.++||++.++.........  ............+..++|+|+.++.++..+. 
T Consensus       131 ~y~~sK~~~e~~-~~~~~~--~~i~~~ivrp~~v~g~~~~~~~~~~--~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~-  204 (224)
T 3h2s_A          131 WYDGALYQYYEY-QFLQMN--ANVNWIGISPSEAFPSGPATSYVAG--KDTLLVGEDGQSHITTGNMALAILDQLEHPT-  204 (224)
T ss_dssp             THHHHHHHHHHH-HHHTTC--TTSCEEEEEECSBCCCCCCCCEEEE--SSBCCCCTTSCCBCCHHHHHHHHHHHHHSCC-
T ss_pred             hhHHHHHHHHHH-HHHHhc--CCCcEEEEcCccccCCCcccCceec--ccccccCCCCCceEeHHHHHHHHHHHhcCcc-
Confidence            899999999854 222211  2899999999999876221110000  0000001122356899999999999987654 


Q ss_pred             CccccEEEeCC
Q 025273          239 YITGETLVVAG  249 (255)
Q Consensus       239 ~~~G~~i~~dg  249 (255)
                       ..|+++++.+
T Consensus       205 -~~g~~~~~~~  214 (224)
T 3h2s_A          205 -AIRDRIVVRD  214 (224)
T ss_dssp             -CTTSEEEEEE
T ss_pred             -ccCCEEEEec
Confidence             3588888754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.89  E-value=4.2e-22  Score=157.91  Aligned_cols=201  Identities=14%  Similarity=0.080  Sum_probs=134.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++||||||+|+||++++++|+++|++|++++|+.+.++.+.       ..+.++++|+++.++         +.++.+|+
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~---------~~~~~~d~   64 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL---------SDLSDQNV   64 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH---------HHHTTCSE
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh---------hhhcCCCE
Confidence            36999999999999999999999999999999987655432       467889999999887         22357999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCC------------CChhh
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS------------SMAMY  160 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~------------~~~~y  160 (255)
                      +||+||....              ...+|+.++.++++++...  +.+++|++||..++.+.+            +...|
T Consensus        65 vi~~ag~~~~--------------~~~~~~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  128 (221)
T 3ew7_A           65 VVDAYGISPD--------------EAEKHVTSLDHLISVLNGT--VSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYY  128 (221)
T ss_dssp             EEECCCSSTT--------------TTTSHHHHHHHHHHHHCSC--CSSEEEEECCCC-------------------CCCS
T ss_pred             EEECCcCCcc--------------ccchHHHHHHHHHHHHHhc--CCceEEEEecceEEEcCCCCccccccCCCCCHHHH
Confidence            9999997431              1345777777776665442  356999999987653322            34569


Q ss_pred             HhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccc--ccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEY--ITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      +.+|.+.+.+. .+.. ...+++++.++||++.++....  +.....   ..........+..++|+|+.++.++..+. 
T Consensus       129 ~~~k~~~e~~~-~~~~-~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~---~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-  202 (221)
T 3ew7_A          129 PTARAQAKQLE-HLKS-HQAEFSWTYISPSAMFEPGERTGDYQIGKD---HLLFGSDGNSFISMEDYAIAVLDEIERPN-  202 (221)
T ss_dssp             CCHHHHHHHHH-HHHT-TTTTSCEEEEECSSCCCCC------------------------CCCHHHHHHHHHHHHHSCS-
T ss_pred             HHHHHHHHHHH-HHHh-hccCccEEEEeCcceecCCCccCceEeccc---cceecCCCCceEeHHHHHHHHHHHHhCcc-
Confidence            99999999873 3332 1238999999999998862110  100000   00000111246789999999999986654 


Q ss_pred             CccccEEEeCCCcc
Q 025273          239 YITGETLVVAGGMP  252 (255)
Q Consensus       239 ~~~G~~i~~dgG~~  252 (255)
                       ..|+.+++.+-.+
T Consensus       203 -~~g~~~~~~~~~~  215 (221)
T 3ew7_A          203 -HLNEHFTVAGKLE  215 (221)
T ss_dssp             -CTTSEEECCC---
T ss_pred             -ccCCEEEECCCCc
Confidence             4589999877654

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.88  E-value=4.7e-22  Score=165.74  Aligned_cols=215  Identities=18%  Similarity=0.120  Sum_probs=156.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +|++|||||+|+||++++++|+++  |++|++++|+....+ .    .   .++.++++|+++.+++++++++.     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~----~---~~~~~~~~D~~d~~~~~~~~~~~-----~   68 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V----V---NSGPFEVVNALDFNQIEHLVEVH-----K   68 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H----H---HSSCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c----c---CCCceEEecCCCHHHHHHHHhhc-----C
Confidence            477999999999999999999999  899999999876522 1    1   13567899999999998887754     6


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC------------CCCC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP------------QSSM  157 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~------------~~~~  157 (255)
                      +|++||+||....      ...+++++.+++|+.++.++++++.+.  ..+++|++||...+.+            ..+.
T Consensus        69 ~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~  140 (312)
T 2yy7_A           69 ITDIYLMAALLSA------TAEKNPAFAWDLNMNSLFHVLNLAKAK--KIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS  140 (312)
T ss_dssp             CCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHTT--SCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC
T ss_pred             CCEEEECCccCCC------chhhChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHHhCCCCCCCCccccCcCCCC
Confidence            9999999996431      123457788999999999999988763  3359999999876533            2346


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC-hhHH----HHHHhhc--------ccCCCCCHHH
Q 025273          158 AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN-DGVR----QTIEQNT--------LLNRLGTTRD  224 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~-~~~~----~~~~~~~--------~~~~~~~~~d  224 (255)
                      ..|+.+|.+.+.+++.++.++  +++++.+.|+.+..+........ ....    .......        ....+...+|
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  218 (312)
T 2yy7_A          141 TVYGISKQAGERWCEYYHNIY--GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDD  218 (312)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH--CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHH
T ss_pred             chhHHHHHHHHHHHHHHHHhc--CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHH
Confidence            789999999999999998877  78999999999887543211110 1111    1111111        1112356799


Q ss_pred             HHHHHHHhcCCCCCCc-cccEEEeCC
Q 025273          225 MAAAAAFLASDDASYI-TGETLVVAG  249 (255)
Q Consensus       225 ~a~~~~~l~s~~~~~~-~G~~i~~dg  249 (255)
                      +++++..++....... .|+++++.+
T Consensus       219 va~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          219 AIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             HHHHHHHHHhCcccccccCceEEeCC
Confidence            9999998886543222 247888865

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.88  E-value=5.1e-21  Score=168.78  Aligned_cols=223  Identities=16%  Similarity=0.047  Sum_probs=156.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHc---CCeEEEEeCCchhHHHHHHHHHh----------------cCCeEEEEEec
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLE---GASVVVSSRKQKNVDEAVVKLKA----------------RGIEVIGVVCH   69 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~----------------~~~~~~~~~~D   69 (255)
                      ..++|+||||||+|+||++++++|+++   |++|++++|+.+..+... .+..                ...++.++.+|
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARR-RLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHH-HHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHH-HHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            367899999999999999999999999   999999999876543222 1111                13589999999


Q ss_pred             CC------CHHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEE
Q 025273           70 VS------NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVV  143 (255)
Q Consensus        70 v~------~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv  143 (255)
                      ++      +.+.++++++       ++|+|||+||....         +.+++.+++|+.++.++++++...  ..+++|
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~~~--~~~~~V  210 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIALTT--KLKPFT  210 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHTSS--SCCCEE
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHHhC--CCCeEE
Confidence            98      5556666655       58999999998642         123456899999999999988763  234899


Q ss_pred             EEcccCccCCCCC----------------------ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcc-ccc
Q 025273          144 LISSIAGYQPQSS----------------------MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA-EYI  200 (255)
Q Consensus       144 ~iss~~~~~~~~~----------------------~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~-~~~  200 (255)
                      ++||...+.....                      ...|+.+|.+.+.+++.++.+.  +++++.+.||.+..+-. ...
T Consensus       211 ~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ivRpg~v~G~~~~~g~  288 (478)
T 4dqv_A          211 YVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC--ALPVAVFRCGMILADTSYAGQ  288 (478)
T ss_dssp             EEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECCSSSSSC
T ss_pred             EEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh--CCCeEEEECceeeCCCccCCc
Confidence            9999765432111                      1349999999999999998876  78999999999977532 111


Q ss_pred             cCChhHHHHH----Hh--hcc---------------cCCCCCHHHHHHHHHHhcCCC--CCCccccEEEeCCCcc
Q 025273          201 TSNDGVRQTI----EQ--NTL---------------LNRLGTTRDMAAAAAFLASDD--ASYITGETLVVAGGMP  252 (255)
Q Consensus       201 ~~~~~~~~~~----~~--~~~---------------~~~~~~~~d~a~~~~~l~s~~--~~~~~G~~i~~dgG~~  252 (255)
                      ....++...+    ..  ..+               ...+...+|++++++.++...  .....|+++++.++..
T Consensus       289 ~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          289 LNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD  363 (478)
T ss_dssp             CCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC
T ss_pred             CCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC
Confidence            1111122111    11  111               113467899999998887531  1123588999988764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.88  E-value=7.2e-22  Score=161.58  Aligned_cols=192  Identities=18%  Similarity=0.209  Sum_probs=141.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||+|+||++++++|+ +|++|++++|+.+. +        .  .   +++|+++.++++++++.+     ++|+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--------~--~---~~~Dl~~~~~~~~~~~~~-----~~d~   60 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--------G--G---YKLDLTDFPRLEDFIIKK-----RPDV   60 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--------T--C---EECCTTSHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--------C--C---ceeccCCHHHHHHHHHhc-----CCCE
Confidence            369999999999999999999 58999999998742 1        1  1   789999999999988765     7999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCC----------CChhhHh
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQS----------SMAMYGV  162 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~----------~~~~y~~  162 (255)
                      +|||||....     +.+.+++++.+++|+.++.++++++.+.   ++++|++||..++.+..          +...|+.
T Consensus        61 vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~  132 (273)
T 2ggs_A           61 IINAAAMTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKVI---DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGL  132 (273)
T ss_dssp             EEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT---TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHH
T ss_pred             EEECCcccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHHh---CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHH
Confidence            9999997531     1234668899999999999999998753   35999999988764432          3678999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcc------cCCCCCHHHHHHHHHHhcCC
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL------LNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~a~~~~~l~s~  235 (255)
                      +|++.+.+++.    ... .+|++.|. |  ++++...      +........+      ...+..++|+++.+.++++.
T Consensus       133 sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~  199 (273)
T 2ggs_A          133 SKLLGETFALQ----DDSLIIRTSGIF-R--NKGFPIY------VYKTLKEGKTVFAFKGYYSPISARKLASAILELLEL  199 (273)
T ss_dssp             HHHHHHHHHCC----TTCEEEEECCCB-S--SSSHHHH------HHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhC----CCeEEEeccccc-c--ccHHHHH------HHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhc
Confidence            99999999987    222 45555544 3  2322111      1111111111      34678999999999999865


Q ss_pred             CCCCccccEEEeCC
Q 025273          236 DASYITGETLVVAG  249 (255)
Q Consensus       236 ~~~~~~G~~i~~dg  249 (255)
                      ..   +| .+++++
T Consensus       200 ~~---~g-~~~i~~  209 (273)
T 2ggs_A          200 RK---TG-IIHVAG  209 (273)
T ss_dssp             TC---CE-EEECCC
T ss_pred             Cc---CC-eEEECC
Confidence            42   45 788887

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=5.4e-24  Score=168.27  Aligned_cols=196  Identities=13%  Similarity=0.063  Sum_probs=146.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +|++|||||+|+||++++++|+++|+  +|++++|+.+.          ...++.++.+|+++.+++++++         
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~---------   65 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS---------   65 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC---------
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh---------
Confidence            68999999999999999999999998  99999999765          1347788899999887766543         


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      +|++||++|....       +.+++++.+++|+.++.++++++.+.  ..+++|++||..++.+  +...|+.+|.+++.
T Consensus        66 ~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e~  134 (215)
T 2a35_A           66 IDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADAK--SSIFYNRVKGELEQ  134 (215)
T ss_dssp             CSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTT--CSSHHHHHHHHHHH
T ss_pred             hcEEEECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHHc--CCCEEEEECCcccCCC--CccHHHHHHHHHHH
Confidence            8999999996431       13347788999999999999988764  3358999999887643  45689999999998


Q ss_pred             HHHHHHHHhCCCee-EEEEeCCcccCCccccccCChhHHHHHHhhcc----cCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          170 LTKALAAEMAPDTR-VNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL----LNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       170 l~~~la~e~~~~v~-v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.    +  +++ ++.++||++.++....... ....   ....+    ...+..++|+++.+..++..+.    ++.
T Consensus       135 ~~~~----~--~~~~~~~vrp~~v~g~~~~~~~~-~~~~---~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~----~~~  200 (215)
T 2a35_A          135 ALQE----Q--GWPQLTIARPSLLFGPREEFRLA-EILA---APIARILPGKYHGIEACDLARALWRLALEEG----KGV  200 (215)
T ss_dssp             HHTT----S--CCSEEEEEECCSEESTTSCEEGG-GGTT---CCCC----CHHHHHHHHHHHHHHHHHHTCCC----SEE
T ss_pred             HHHH----c--CCCeEEEEeCceeeCCCCcchHH-HHHH---HhhhhccCCCcCcEeHHHHHHHHHHHHhcCC----CCc
Confidence            8864    2  788 9999999999875431100 0000   00000    1124578999999999987653    667


Q ss_pred             EEeCCCc
Q 025273          245 LVVAGGM  251 (255)
Q Consensus       245 i~~dgG~  251 (255)
                      +++.++.
T Consensus       201 ~~i~~~~  207 (215)
T 2a35_A          201 RFVESDE  207 (215)
T ss_dssp             EEEEHHH
T ss_pred             eEEcHHH
Confidence            7776654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.88  E-value=3.8e-22  Score=164.58  Aligned_cols=194  Identities=16%  Similarity=0.165  Sum_probs=145.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||+|+||++++++|+++|++|++++|.                     ++|+++.+++++++++.     ++|++
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~-----~~d~v   60 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI-----RPHII   60 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc-----CCCEE
Confidence            79999999999999999999999999999992                     37999999999988866     79999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------CCCChhhHh
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~  162 (255)
                      ||+||....     ....+++++.+++|+.++.++++++.+.   +.++|++||...+.+           ..+...|+.
T Consensus        61 i~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~  132 (287)
T 3sc6_A           61 IHCAAYTKV-----DQAEKERDLAYVINAIGARNVAVASQLV---GAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGA  132 (287)
T ss_dssp             EECCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHH
T ss_pred             EECCcccCh-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHH
Confidence            999997541     1112356788999999999999988764   348999999876532           334678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcc-------cCCCCCHHHHHHHHHHhcCC
Q 025273          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL-------LNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d~a~~~~~l~s~  235 (255)
                      +|.+.+.+++.++.      ++..+.|+.+.++....+.  ..+........+       ...+..++|+++++.+++..
T Consensus       133 sK~~~E~~~~~~~~------~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  204 (287)
T 3sc6_A          133 SKYAGEQFVKELHN------KYFIVRTSWLYGKYGNNFV--KTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHT  204 (287)
T ss_dssp             HHHHHHHHHHHHCS------SEEEEEECSEECSSSCCHH--HHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhCC------CcEEEeeeeecCCCCCcHH--HHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhC
Confidence            99999999987644      4578899998876432211  111111111111       12355699999999999976


Q ss_pred             CCCCccccEEEeCCCccc
Q 025273          236 DASYITGETLVVAGGMPS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      ..    ++.+++.+|...
T Consensus       205 ~~----~~~~~i~~~~~~  218 (287)
T 3sc6_A          205 SL----YGTYHVSNTGSC  218 (287)
T ss_dssp             CC----CEEEECCCBSCE
T ss_pred             CC----CCeEEEcCCCcc
Confidence            54    568999888654

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.88  E-value=1e-21  Score=164.45  Aligned_cols=209  Identities=14%  Similarity=0.160  Sum_probs=153.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||+|+||++++++|+++|++|++++|+.                    .+|+++.+++++++++.     ++|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~-----~~d   57 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RID   57 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc-----CCC
Confidence            57899999999999999999999999999988763                    26999999998888765     799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC---------------CCC
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP---------------QSS  156 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~---------------~~~  156 (255)
                      ++||+|+....    .....++.++.+++|+.++.++++++.+.  ..+++|++||...+..               ..+
T Consensus        58 ~vih~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p  131 (321)
T 1e6u_A           58 QVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEP  131 (321)
T ss_dssp             EEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCG
T ss_pred             EEEEcCeecCC----cchhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEccHHHcCCCCCCCcCccccccCCCCC
Confidence            99999996431    11123456788999999999999988764  2359999999876531               112


Q ss_pred             -ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC----hhHHHHHHh-------hc-------ccC
Q 025273          157 -MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN----DGVRQTIEQ-------NT-------LLN  217 (255)
Q Consensus       157 -~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~-------~~-------~~~  217 (255)
                       ...|+.+|.+.+.+++.++.++  +++++.++|+.+.++........    ..+......       ..       ...
T Consensus       132 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~  209 (321)
T 1e6u_A          132 TNEPYAIAKIAGIKLCESYNRQY--GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMR  209 (321)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHh--CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEE
Confidence             3589999999999999999877  78999999999988754321111    112222211       11       111


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCC------ccccEEEeCCCccc
Q 025273          218 RLGTTRDMAAAAAFLASDDASY------ITGETLVVAGGMPS  253 (255)
Q Consensus       218 ~~~~~~d~a~~~~~l~s~~~~~------~~G~~i~~dgG~~~  253 (255)
                      .+...+|++++++.++......      ..|+++++.+|...
T Consensus       210 ~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~  251 (321)
T 1e6u_A          210 EFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDC  251 (321)
T ss_dssp             CEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCE
T ss_pred             EeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCc
Confidence            3457899999999888654211      13688999877543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.88  E-value=1.6e-21  Score=179.60  Aligned_cols=236  Identities=15%  Similarity=0.105  Sum_probs=158.7

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      |+..+++|+||||||+|+||++++++|+++|++|++++|+........+.+.. ...++.++++|+++.+++++++++. 
T Consensus         5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-
Confidence            33456789999999999999999999999999999999876532222222221 1356778899999999988887653 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC------------
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------  152 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------------  152 (255)
                          ++|+|||+||.... .    ...+..++.+++|+.++.++++++...  +.++||++||...+.            
T Consensus        84 ----~~D~Vih~A~~~~~-~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~~iV~~SS~~vyg~~~~~~~~~~~~  152 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAV-G----ESTQIPLRYYHNNILGTVVLLELMQQY--NVSKFVFSSSATVYGDATRFPNMIPIP  152 (699)
T ss_dssp             ----CCCEEEECCSCCCH-H----HHHHSHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCCGGGSTTCCSBC
T ss_pred             ----CCCEEEECCcccCc-C----ccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECcHHHhCCCccccccCCcc
Confidence                79999999997431 1    112234568899999999998877653  346999999987542            


Q ss_pred             ---CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC------ChhHHH---HHHhh--cc---
Q 025273          153 ---PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS------NDGVRQ---TIEQN--TL---  215 (255)
Q Consensus       153 ---~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~------~~~~~~---~~~~~--~~---  215 (255)
                         +..+...|+.+|++.+.+++.++.+...++++..+.|+.+..+.......      ...+..   .....  .+   
T Consensus       153 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (699)
T 1z45_A          153 EECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYI  232 (699)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCC
T ss_pred             ccCCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEE
Confidence               12245789999999999999998885348899999998876653211110      011111   11110  01   


Q ss_pred             ------------cCCCCCHHHHHHHHHHhcCCC----CCCccccEEEeCCCccc
Q 025273          216 ------------LNRLGTTRDMAAAAAFLASDD----ASYITGETLVVAGGMPS  253 (255)
Q Consensus       216 ------------~~~~~~~~d~a~~~~~l~s~~----~~~~~G~~i~~dgG~~~  253 (255)
                                  ...++..+|+|++++.++...    ...-.++++++.+|...
T Consensus       233 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~  286 (699)
T 1z45_A          233 FGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGS  286 (699)
T ss_dssp             C------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCE
T ss_pred             eCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCC
Confidence                        112346799999888776421    11123678999887653

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.88  E-value=4.1e-22  Score=165.88  Aligned_cols=216  Identities=15%  Similarity=0.158  Sum_probs=153.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +||||||+|+||++++++|+++| ++|++++|+.....  ...+.  ...   +.+|+++.+.++.+++...  ++++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~--~~~---~~~d~~~~~~~~~~~~~~~--~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV--DLN---IADYMDKEDFLIQIMAGEE--FGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH--TSC---CSEEEEHHHHHHHHHTTCC--CSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC--cce---eccccccHHHHHHHHhccc--cCCCcE
Confidence            48999999999999999999999 89999999865421  11121  112   6789998888777654110  126999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC-----------CCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ-----------SSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~  161 (255)
                      +||+||....       +.+++++.+++|+.++.++++++.+.  .. ++|++||...+.+.           .+...|+
T Consensus        72 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~  141 (310)
T 1eq2_A           72 IFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTSDFIESREYEKPLNVYG  141 (310)
T ss_dssp             EEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHH
T ss_pred             EEECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhH
Confidence            9999997542       22336778999999999999988764  33 89999998665322           2366899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC--C--hhHHHHHH---------hhcc-cCCCCCHHHHHH
Q 025273          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS--N--DGVRQTIE---------QNTL-LNRLGTTRDMAA  227 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~--~--~~~~~~~~---------~~~~-~~~~~~~~d~a~  227 (255)
                      .+|.+.+.+++.++.+.  +++++.++||.+.++.......  .  ..+.....         .... ...+..++|+++
T Consensus       142 ~sK~~~e~~~~~~~~~~--g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~  219 (310)
T 1eq2_A          142 YSKFLFDEYVRQILPEA--NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  219 (310)
T ss_dssp             HHHHHHHHHHHHHGGGC--SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHc--CCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHH
Confidence            99999999999988765  7899999999998875431100  0  11111111         1111 334567899999


Q ss_pred             HHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          228 AAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++.++....    |+.+++.+|...+
T Consensus       220 ~~~~~~~~~~----~~~~~i~~~~~~s  242 (310)
T 1eq2_A          220 VNLWFLENGV----SGIFNLGTGRAES  242 (310)
T ss_dssp             HHHHHHHHCC----CEEEEESCSCCBC
T ss_pred             HHHHHHhcCC----CCeEEEeCCCccC
Confidence            9998886543    7899999886543

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.87  E-value=2.5e-21  Score=161.76  Aligned_cols=211  Identities=19%  Similarity=0.181  Sum_probs=150.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +||||||+|+||++++++|+++  |++|++++|+....+           .+.++++|+++.+++++++++.     ++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~-----~~d   64 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEKY-----SID   64 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHHT-----TCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhhc-----CCc
Confidence            4899999999999999999999  899999998865421           3457889999999998887652     799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC------------CCChh
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ------------SSMAM  159 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~------------~~~~~  159 (255)
                      ++||+|+....      ...+++++.+++|+.++.++++++.+.  ..+++|++||...+.+.            .+...
T Consensus        65 ~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~  136 (317)
T 3ajr_A           65 AIFHLAGILSA------KGEKDPALAYKVNMNGTYNILEAAKQH--RVEKVVIPSTIGVFGPETPKNKVPSITITRPRTM  136 (317)
T ss_dssp             EEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSH
T ss_pred             EEEECCcccCC------ccccChHHHhhhhhHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCCCCCCccccccCCCCch
Confidence            99999997431      123457788999999999999988764  33599999998765432            24678


Q ss_pred             hHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc-CChhHH----HHHHhhc--------ccCCCCCHHHHH
Q 025273          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT-SNDGVR----QTIEQNT--------LLNRLGTTRDMA  226 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~-~~~~~~----~~~~~~~--------~~~~~~~~~d~a  226 (255)
                      |+.+|.+.+.+++.++.++  +++++.+.|+.+..+...... ......    .......        ....+...+|++
T Consensus       137 Y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  214 (317)
T 3ajr_A          137 FGVTKIAAELLGQYYYEKF--GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDAL  214 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc--CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHH
Confidence            9999999999999988876  789999986655443211100 001111    1111110        011234679999


Q ss_pred             HHHHHhcCCCCC-CccccEEEeCCC
Q 025273          227 AAAAFLASDDAS-YITGETLVVAGG  250 (255)
Q Consensus       227 ~~~~~l~s~~~~-~~~G~~i~~dgG  250 (255)
                      ++++.++..... ..+|+.+++.|+
T Consensus       215 ~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          215 KALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHhCCccccccCceEecCCc
Confidence            998877755432 235688898763

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.87  E-value=3.4e-22  Score=165.70  Aligned_cols=202  Identities=15%  Similarity=0.102  Sum_probs=147.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||+|+||++++++|+ +|++|++++|+..                 ++++|+++.++++++++..     ++|+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d~   57 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPDV   57 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc-----CCCE
Confidence            369999999999999999999 8999999999862                 3578999999998888754     6999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------CCCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~  161 (255)
                      +||+||.....     .+.+++++.+++|+.++.++++++.+.   +.++|++||...+.+           ..+...|+
T Consensus        58 vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~  129 (299)
T 1n2s_A           58 IVNAAAHTAVD-----KAESEPELAQLLNATSVEAIAKAANET---GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYG  129 (299)
T ss_dssp             EEECCCCCCHH-----HHTTCHHHHHHHHTHHHHHHHHHHTTT---TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH
T ss_pred             EEECcccCCHh-----hhhcCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEEecccEEeCCCCCCCCCCCCCCCccHHH
Confidence            99999964310     112346778999999999999988653   248999999876532           23367899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhccc-------CCCCCHHHHHHHHHHhcC
Q 025273          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-------NRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~d~a~~~~~l~s  234 (255)
                      .+|.+.+.+++.++.      +++.+.|+.+.++....+.  ..+........+.       ..+..++|+++++..++.
T Consensus       130 ~sK~~~E~~~~~~~~------~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  201 (299)
T 1n2s_A          130 KTKLAGEKALQDNCP------KHLIFRTSWVYAGKGNNFA--KTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIR  201 (299)
T ss_dssp             HHHHHHHHHHHHHCS------SEEEEEECSEECSSSCCHH--HHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC------CeEEEeeeeecCCCcCcHH--HHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHH
Confidence            999999999987642      7889999999887543111  1122222221111       234468999999999886


Q ss_pred             CCCCCc-cccEEEeCCCccc
Q 025273          235 DDASYI-TGETLVVAGGMPS  253 (255)
Q Consensus       235 ~~~~~~-~G~~i~~dgG~~~  253 (255)
                      ...... .|+.+++.+|...
T Consensus       202 ~~~~~~~~~~~~~i~~~~~~  221 (299)
T 1n2s_A          202 VALNKPEVAGLYHLVAGGTT  221 (299)
T ss_dssp             HHHHCGGGCEEEECCCBSCE
T ss_pred             HhccccccCceEEEeCCCCC
Confidence            532122 4789999988653

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.86  E-value=5.1e-23  Score=172.14  Aligned_cols=215  Identities=16%  Similarity=-0.005  Sum_probs=144.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA--RGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++++|+||||||+|+||++++++|+++|++|++++|+........+.+..  ....+.++++|++              
T Consensus         3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--------------   68 (321)
T 3vps_A            3 RNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS--------------   68 (321)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT--------------
T ss_pred             cccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc--------------
Confidence            345679999999999999999999999999999999986521000000000  0112333344443              


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------C
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------Q  154 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~  154 (255)
                         ++|++||+|+........  .   .....++ |+.++.++++++...-  .+++|++||...+..           .
T Consensus        69 ---~~d~vi~~a~~~~~~~~~--~---~~~~~~~-n~~~~~~ll~a~~~~~--v~~~v~~SS~~v~~~~~~~~~~E~~~~  137 (321)
T 3vps_A           69 ---DVRLVYHLASHKSVPRSF--K---QPLDYLD-NVDSGRHLLALCTSVG--VPKVVVGSTCEVYGQADTLPTPEDSPL  137 (321)
T ss_dssp             ---TEEEEEECCCCCCHHHHT--T---STTTTHH-HHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             ---cCCEEEECCccCChHHHH--h---CHHHHHH-HHHHHHHHHHHHHHcC--CCeEEEecCHHHhCCCCCCCCCCCCCC
Confidence               699999999975411101  1   1223456 9999999999887653  359999999876532           2


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCCCe-eEEEEeCCcccCCccccccCChhHHHHHHhhcc---------cCCCCCHHH
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL---------LNRLGTTRD  224 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~~v-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d  224 (255)
                      .+...|+.+|.+.+.+++.++.+.  ++ +++.+.|+.+.++..........+........+         ...+..++|
T Consensus       138 ~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  215 (321)
T 3vps_A          138 SPRSPYAASKVGLEMVAGAHQRAS--VAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITD  215 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHSS--SSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHc--CCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHH
Confidence            346789999999999999998875  78 999999999988754321111122222222211         123457899


Q ss_pred             HHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          225 MAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       225 ~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++++.+++.....   | ++++.+|...
T Consensus       216 va~~~~~~~~~~~~---g-~~~i~~~~~~  240 (321)
T 3vps_A          216 VVDKLVALANRPLP---S-VVNFGSGQSL  240 (321)
T ss_dssp             HHHHHHHGGGSCCC---S-EEEESCSCCE
T ss_pred             HHHHHHHHHhcCCC---C-eEEecCCCcc
Confidence            99999999977653   7 8999988754

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.86  E-value=3.2e-21  Score=171.35  Aligned_cols=217  Identities=13%  Similarity=0.016  Sum_probs=156.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh---HHHHHHHHH---------hcCCeEEEEEecCCCHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN---VDEAVVKLK---------ARGIEVIGVVCHVSNGQQRKNL   79 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~---------~~~~~~~~~~~Dv~~~~~v~~~   79 (255)
                      .|+||||||+|+||++++++|.++|++|++++|+...   .+++.+.+.         ....++.++.+|+++.+++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4789999999999999999999899999999999873   233333222         12568999999999988766  


Q ss_pred             HHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc--cC-----
Q 025273           80 INQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--YQ-----  152 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~--~~-----  152 (255)
                            ...++|+|||+|+....        ...++..+++|+.++.++++++.+   ...++|++||...  +.     
T Consensus       228 ------~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~vG~~~~~~~~  290 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISVGTYFDIDTE  290 (508)
T ss_dssp             ------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCTTSEECTTCS
T ss_pred             ------CccCCCEEEECCceecC--------CCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhhccCCccCCc
Confidence                  24589999999997531        223566789999999999998877   4569999999876  10     


Q ss_pred             -----------CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC---h----hHHHHHHhhc
Q 025273          153 -----------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN---D----GVRQTIEQNT  214 (255)
Q Consensus       153 -----------~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~---~----~~~~~~~~~~  214 (255)
                                 +..+...|+.+|.+.+.+++.++.   .+++++.+.||.+.++........   .    ..........
T Consensus       291 ~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~  367 (508)
T 4f6l_B          291 DVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN---NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLD  367 (508)
T ss_dssp             CCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH---TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCS
T ss_pred             CcccccccccccccCCCcHHHHHHHHHHHHHHHHH---cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcC
Confidence                       022567899999999999998754   389999999999988754432110   1    1111111111


Q ss_pred             --------ccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          215 --------LLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       215 --------~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                              ....+..++|+|+++++++....   .|+++++.+|...
T Consensus       368 ~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~  411 (508)
T 4f6l_B          368 CIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  411 (508)
T ss_dssp             EEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEE
T ss_pred             CCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCC
Confidence                    11125678999999999987654   6899999998754

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.86  E-value=8.6e-21  Score=158.07  Aligned_cols=213  Identities=15%  Similarity=0.095  Sum_probs=149.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++|+||||||+|+||++++++|+++|+      +...           ....+.++++|+++.++++++++..     +
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~~-----~   61 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-----------DWVFVSSKDADLTDTAQTRALFEKV-----Q   61 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-----------EEEECCTTTCCTTSHHHHHHHHHHS-----C
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-----------cccccCceecccCCHHHHHHHHhhc-----C
Confidence            4578999999999999999999999998      1100           0112333478999999999888753     6


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC---------------C
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP---------------Q  154 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~---------------~  154 (255)
                      +|+|||+|+....    ...+.++.++.+++|+.++.++++++...-  .+++|++||...+..               .
T Consensus        62 ~d~Vih~A~~~~~----~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~  135 (319)
T 4b8w_A           62 PTHVIHLAAMVGG----LFRNIKYNLDFWRKNVHMNDNVLHSAFEVG--ARKVVSCLSTCIFPDKTTYPIDETMIHNGPP  135 (319)
T ss_dssp             CSEEEECCCCCCC----HHHHTTCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGSCSSCCSSBCGGGGGBSCC
T ss_pred             CCEEEECceeccc----ccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEcchhhcCCCCCCCccccccccCCC
Confidence            9999999997431    011123356778999999999999887642  348999999876421               1


Q ss_pred             -CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCCh----hHHHH----HHhhcc---------c
Q 025273          155 -SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSND----GVRQT----IEQNTL---------L  216 (255)
Q Consensus       155 -~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~----~~~~~----~~~~~~---------~  216 (255)
                       +....|+.+|.+.+.+++.++.+.  ++++..+.|+.+..+.........    .+...    .....+         .
T Consensus       136 ~p~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  213 (319)
T 4b8w_A          136 HNSNFGYSYAKRMIDVQNRAYFQQY--GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPR  213 (319)
T ss_dssp             CSSSHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCE
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhh--CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCee
Confidence             222369999999999999999887  789999999999887543211111    11222    111111         1


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          217 NRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       217 ~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ..+..++|+++++..++..... ..|+++++.+|...
T Consensus       214 ~~~i~v~Dva~a~~~~~~~~~~-~~~~~~ni~~~~~~  249 (319)
T 4b8w_A          214 RQFIYSLDLAQLFIWVLREYNE-VEPIILSVGEEDEV  249 (319)
T ss_dssp             ECEEEHHHHHHHHHHHHHHCCC-SSCEEECCCGGGCE
T ss_pred             EEEEeHHHHHHHHHHHHhcccc-CCceEEEecCCCce
Confidence            1346789999999988865332 35778888877654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.86  E-value=1.6e-20  Score=154.80  Aligned_cols=199  Identities=9%  Similarity=0.029  Sum_probs=146.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      |++|||||+|+||++++++|+++  |++|++++|+.+..+.+.    .  ..+.++++|+++.++++++++       .+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~~-------~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAFA-------GV   67 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHHh-------cC
Confidence            46999999999999999999999  999999999877654332    1  256788999999998887765       68


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGL  170 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l  170 (255)
                      |++||+|+...        . +      ++|+.++.++++++...  ..+++|++||..++.   ....|+.+|.+.+.+
T Consensus        68 d~vi~~a~~~~--------~-~------~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E~~  127 (287)
T 2jl1_A           68 SKLLFISGPHY--------D-N------TLLIVQHANVVKAARDA--GVKHIAYTGYAFAEE---SIIPLAHVHLATEYA  127 (287)
T ss_dssp             SEEEECCCCCS--------C-H------HHHHHHHHHHHHHHHHT--TCSEEEEEEETTGGG---CCSTHHHHHHHHHHH
T ss_pred             CEEEEcCCCCc--------C-c------hHHHHHHHHHHHHHHHc--CCCEEEEECCCCCCC---CCCchHHHHHHHHHH
Confidence            99999999521        1 1      57899999999888653  235999999987653   224799999999998


Q ss_pred             HHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHH----HhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          171 TKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTI----EQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       171 ~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      ++.      .+++++.+.||++.++......  .......    ........+..++|+++++..+++.+.  ..|+.++
T Consensus       128 ~~~------~~~~~~ilrp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~  197 (287)
T 2jl1_A          128 IRT------TNIPYTFLRNALYTDFFVNEGL--RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG--HENKTYN  197 (287)
T ss_dssp             HHH------TTCCEEEEEECCBHHHHSSGGG--HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--CTTEEEE
T ss_pred             HHH------cCCCeEEEECCEeccccchhhH--HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC--CCCcEEE
Confidence            863      3789999999988765421111  0000000    001122357789999999999986543  3689999


Q ss_pred             eCCCcccC
Q 025273          247 VAGGMPSR  254 (255)
Q Consensus       247 ~dgG~~~~  254 (255)
                      +.||...+
T Consensus       198 i~~~~~~s  205 (287)
T 2jl1_A          198 LVSNQPWT  205 (287)
T ss_dssp             ECCSSCBC
T ss_pred             ecCCCcCC
Confidence            99986543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.84  E-value=2.2e-21  Score=159.99  Aligned_cols=204  Identities=14%  Similarity=0.082  Sum_probs=146.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|+||||| +|+||++++++|+++|++|++++|+.+.+          ...+.++++|+++.++++++++      +++|
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~------~~~d   65 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH------LRPE   65 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG------GCCS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc------CCCC
Confidence            46899999 59999999999999999999999987652          2467889999999998887665      2699


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------CCCChhh
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMY  160 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y  160 (255)
                      ++||+||..          ..+.+..+++|+.++.++++++...  ..+++|++||...+..           ..+...|
T Consensus        66 ~vih~a~~~----------~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  133 (286)
T 3gpi_A           66 ILVYCVAAS----------EYSDEHYRLSYVEGLRNTLSALEGA--PLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFS  133 (286)
T ss_dssp             EEEECHHHH----------HHC-----CCSHHHHHHHHHHTTTS--CCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHH
T ss_pred             EEEEeCCCC----------CCCHHHHHHHHHHHHHHHHHHHhhC--CCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChh
Confidence            999999862          1335667889999999999887642  3469999999876432           2346789


Q ss_pred             HhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC-hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN-DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +.+|.+.+.+ +..       ++++.+.|+.+.++....+... .. ............+..++|+++++.+++......
T Consensus       134 ~~sK~~~E~~-~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~  204 (286)
T 3gpi_A          134 GKRMLEAEAL-LAA-------YSSTILRFSGIYGPGRLRMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHA  204 (286)
T ss_dssp             HHHHHHHHHH-GGG-------SSEEEEEECEEEBTTBCHHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTS
T ss_pred             hHHHHHHHHH-Hhc-------CCeEEEecccccCCCchhHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHHhhhccC
Confidence            9999999988 543       6888999999987754321100 00 000011112234567899999999998764223


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ..|+++++.+|...
T Consensus       205 ~~~~~~~~~~~~~~  218 (286)
T 3gpi_A          205 VPERLYIVTDNQPL  218 (286)
T ss_dssp             CCCSEEEECCSCCE
T ss_pred             CCCceEEEeCCCCC
Confidence            46899999988654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.83  E-value=2.1e-20  Score=153.92  Aligned_cols=194  Identities=12%  Similarity=0.059  Sum_probs=138.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ++|||||+|+||++++++|+++  |++|++++|+.+..+.+.    .  ..+.++++|+++.++++++++       .+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~~-------~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--QGITVRQADYGDEAALTSALQ-------GVE   67 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--CCCeEEEcCCCCHHHHHHHHh-------CCC
Confidence            4899999999999999999998  999999999977654332    1  256788999999998887765       689


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~  171 (255)
                      ++||+|+...                 ..|+.++.++++++...  ..+++|++||..++.   ....|+.+|.+.+.++
T Consensus        68 ~vi~~a~~~~-----------------~~~~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~---~~~~y~~sK~~~e~~~  125 (286)
T 2zcu_A           68 KLLLISSSEV-----------------GQRAPQHRNVINAAKAA--GVKFIAYTSLLHADT---SPLGLADEHIETEKML  125 (286)
T ss_dssp             EEEECC-------------------------CHHHHHHHHHHHH--TCCEEEEEEETTTTT---CCSTTHHHHHHHHHHH
T ss_pred             EEEEeCCCCc-----------------hHHHHHHHHHHHHHHHc--CCCEEEEECCCCCCC---CcchhHHHHHHHHHHH
Confidence            9999998521                 13566777777776553  345999999987762   2357999999999988


Q ss_pred             HHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHH----HHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          172 KALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQT----IEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       172 ~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +.    .  +++++.++||++.++....+   ......    .........+..++|+++.+.++++.+.  .+|+.+++
T Consensus       126 ~~----~--~~~~~ilrp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i  194 (286)
T 2zcu_A          126 AD----S--GIVYTLLRNGWYSENYLASA---PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEGKVYEL  194 (286)
T ss_dssp             HH----H--CSEEEEEEECCBHHHHHTTH---HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTTCEEEE
T ss_pred             HH----c--CCCeEEEeChHHhhhhHHHh---HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCCceEEE
Confidence            63    2  78999999998876543111   000000    0001122346789999999999886543  37899999


Q ss_pred             CCCccc
Q 025273          248 AGGMPS  253 (255)
Q Consensus       248 dgG~~~  253 (255)
                      +||...
T Consensus       195 ~~~~~~  200 (286)
T 2zcu_A          195 AGDSAW  200 (286)
T ss_dssp             CCSSCB
T ss_pred             eCCCcC
Confidence            998654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.80  E-value=2.2e-19  Score=148.88  Aligned_cols=205  Identities=14%  Similarity=0.010  Sum_probs=139.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||||+|+||++++++|+++| ++|++++|+.+....  +.+..  ..+.++++|+++.++++++++       .+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~~~~~~~D~~d~~~l~~~~~-------~~   73 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QGAEVVQGDQDDQVIMELALN-------GA   73 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CCCEEEEecCCCHHHHHHHHh-------cC
Confidence            4789999999999999999999999 999999999765431  22322  246788999999999887765       69


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC--CCCCChhhHhhHHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--PQSSMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~--~~~~~~~y~~sK~a~~  168 (255)
                      |.+||+++.....             ..+.|+.+..++++++...  ..++||++|+...+.  +......|+.+|.+++
T Consensus        74 d~vi~~a~~~~~~-------------~~~~~~~~~~~~~~aa~~~--gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e  138 (299)
T 2wm3_A           74 YATFIVTNYWESC-------------SQEQEVKQGKLLADLARRL--GLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVE  138 (299)
T ss_dssp             SEEEECCCHHHHT-------------CHHHHHHHHHHHHHHHHHH--TCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHH
T ss_pred             CEEEEeCCCCccc-------------cchHHHHHHHHHHHHHHHc--CCCEEEEEcCccccccCCCcccCchhhHHHHHH
Confidence            9999999853210             1245566666666665442  345899966654322  1223467999999999


Q ss_pred             HHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC---hhH--HHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcccc
Q 025273          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN---DGV--RQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       169 ~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      .+++.    .  +++++.++||++.+++...+...   ...  ............+..++|+++.+..++..+. ...|+
T Consensus       139 ~~~~~----~--gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~g~  211 (299)
T 2wm3_A          139 EYFRD----I--GVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE-KYVGQ  211 (299)
T ss_dssp             HHHHH----H--TCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH-HHTTC
T ss_pred             HHHHH----C--CCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh-hhCCe
Confidence            88864    2  78999999999988765422110   000  0000000111235689999999998886532 23688


Q ss_pred             EEEeCC
Q 025273          244 TLVVAG  249 (255)
Q Consensus       244 ~i~~dg  249 (255)
                      .+++.|
T Consensus       212 ~~~~~g  217 (299)
T 2wm3_A          212 NIGLST  217 (299)
T ss_dssp             EEECCS
T ss_pred             EEEeee
Confidence            898876

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.78  E-value=8.3e-19  Score=148.85  Aligned_cols=205  Identities=14%  Similarity=0.028  Sum_probs=138.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEec-CCCHHHHHHHHHHHHHHhCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH-VSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +|++|||||+|+||++++++|+++|++|++++|+.+...  .+.+.. ...+.++++| +++.+++.++++       .+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~-------~~   74 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE-------GA   74 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT-------TC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh-------cC
Confidence            678999999999999999999999999999999977642  122322 2368888999 999999888765       68


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC-ccCCCCCChhhHhhHHHHHH
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA-GYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~-~~~~~~~~~~y~~sK~a~~~  169 (255)
                      |.+|||++...  .              +.|..+ .++++++...- ..+++|++||.. ...+......|+.+|.+.+.
T Consensus        75 d~Vi~~a~~~~--~--------------~~~~~~-~~l~~aa~~~g-~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~  136 (352)
T 1xgk_A           75 HLAFINTTSQA--G--------------DEIAIG-KDLADAAKRAG-TIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVEN  136 (352)
T ss_dssp             SEEEECCCSTT--S--------------CHHHHH-HHHHHHHHHHS-CCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHH
T ss_pred             CEEEEcCCCCC--c--------------HHHHHH-HHHHHHHHHcC-CccEEEEeCCccccccCCCCCccHHHHHHHHHH
Confidence            99999987532  0              125544 55666554421 036999999986 23333445789999999999


Q ss_pred             HHHHHHHHhCCCeeEEEEeCCcccCCccccccC-------ChhHHH-H-HHhhcccCCCCCH-HHHHHHHHHhcCCCCCC
Q 025273          170 LTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS-------NDGVRQ-T-IEQNTLLNRLGTT-RDMAAAAAFLASDDASY  239 (255)
Q Consensus       170 l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~-------~~~~~~-~-~~~~~~~~~~~~~-~d~a~~~~~l~s~~~~~  239 (255)
                      +++.+      +++++.++||++-++.......       ..+... . .........+..+ +|+++.+..++......
T Consensus       137 ~~~~~------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~  210 (352)
T 1xgk_A          137 YVRQL------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK  210 (352)
T ss_dssp             HHHTS------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH
T ss_pred             HHHHc------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchh
Confidence            98752      7888999999875543221100       000000 0 0000011124567 89999999888654323


Q ss_pred             ccccEEEeCCC
Q 025273          240 ITGETLVVAGG  250 (255)
Q Consensus       240 ~~G~~i~~dgG  250 (255)
                      ..|+++++.++
T Consensus       211 ~~g~~~~l~~~  221 (352)
T 1xgk_A          211 WNGHRIALTFE  221 (352)
T ss_dssp             HTTCEEEECSE
T ss_pred             hCCeEEEEecC
Confidence            46889998864

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.78  E-value=3.6e-18  Score=140.55  Aligned_cols=197  Identities=12%  Similarity=0.041  Sum_probs=136.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++|||||| |+||++++++|+++|++|++++|+.+..+.+..      ..+.++++|+++.+            +.++|+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~~~~d~   66 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------LDGVTH   66 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------CTTCCE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------cCCCCE
Confidence            68999998 999999999999999999999999877654332      36888999999833            347999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------CCCCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~  161 (255)
                      +||+|+.....      ..  .          ..++.+++...-.+.+++|++||...+.           +..+...|+
T Consensus        67 vi~~a~~~~~~------~~--~----------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~  128 (286)
T 3ius_A           67 LLISTAPDSGG------DP--V----------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARG  128 (286)
T ss_dssp             EEECCCCBTTB------CH--H----------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHH
T ss_pred             EEECCCccccc------cH--H----------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHH
Confidence            99999975421      01  0          1233343333212346999999986542           233456899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCCh-hHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSND-GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      .+|.+.+.+++.+     .+++++.+.|+.+.++....+..-. ..............+...+|+++++..++....   
T Consensus       129 ~sK~~~E~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---  200 (286)
T 3ius_A          129 RWRVMAEQQWQAV-----PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD---  200 (286)
T ss_dssp             HHHHHHHHHHHHS-----TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC---
T ss_pred             HHHHHHHHHHHhh-----cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC---
Confidence            9999999999876     4789999999999876543221100 000000000122345678999999999987654   


Q ss_pred             cccEEEeCCCcccC
Q 025273          241 TGETLVVAGGMPSR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      .|+.+++.+|...+
T Consensus       201 ~g~~~~i~~~~~~s  214 (286)
T 3ius_A          201 PGAVYNVCDDEPVP  214 (286)
T ss_dssp             TTCEEEECCSCCBC
T ss_pred             CCCEEEEeCCCCcc
Confidence            68899999887653

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.78  E-value=2.5e-18  Score=141.80  Aligned_cols=196  Identities=12%  Similarity=0.062  Sum_probs=131.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           14 VAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +||||||+|+||++++++|+++ |++|++++|+.+..+.+      ....+.++++|+++.++++++++       .+|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~~-------~~d~   68 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAFK-------GMDT   68 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHHh-------CCCE
Confidence            5999999999999999999998 99999999998754322      13478889999999998887765       7899


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~  172 (255)
                      +||++|....               ...|+.++.++++++...  ..++||++||.......    .|..++...  +++
T Consensus        69 vi~~a~~~~~---------------~~~~~~~~~~l~~aa~~~--gv~~iv~~Ss~~~~~~~----~~~~~~~~~--~~e  125 (289)
T 3e48_A           69 VVFIPSIIHP---------------SFKRIPEVENLVYAAKQS--GVAHIIFIGYYADQHNN----PFHMSPYFG--YAS  125 (289)
T ss_dssp             EEECCCCCCS---------------HHHHHHHHHHHHHHHHHT--TCCEEEEEEESCCSTTC----CSTTHHHHH--HHH
T ss_pred             EEEeCCCCcc---------------chhhHHHHHHHHHHHHHc--CCCEEEEEcccCCCCCC----CCccchhHH--HHH
Confidence            9999986431               123666666776666543  23599999996543222    222222211  222


Q ss_pred             HHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCC----CCCHHHHHHHHHHhcCCCCCCccccEEEeC
Q 025273          173 ALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNR----LGTTRDMAAAAAFLASDDASYITGETLVVA  248 (255)
Q Consensus       173 ~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      ....+.  +++++.+.||++.+++.....   ..........+.+.    +..++|+|+.+.++++.+...  |+.+++.
T Consensus       126 ~~~~~~--g~~~~ilrp~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--g~~~~~~  198 (289)
T 3e48_A          126 RLLSTS--GIDYTYVRMAMYMDPLKPYLP---ELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW--GKRYLLS  198 (289)
T ss_dssp             HHHHHH--CCEEEEEEECEESTTHHHHHH---HHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT--TCEEEEC
T ss_pred             HHHHHc--CCCEEEEeccccccccHHHHH---HHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC--CceEEeC
Confidence            222222  899999999999887542211   11111111112222    668999999999998775432  8899998


Q ss_pred             CCccc
Q 025273          249 GGMPS  253 (255)
Q Consensus       249 gG~~~  253 (255)
                       |...
T Consensus       199 -~~~~  202 (289)
T 3e48_A          199 -GYSY  202 (289)
T ss_dssp             -CEEE
T ss_pred             -CCcC
Confidence             6543

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.78  E-value=4.3e-18  Score=144.69  Aligned_cols=213  Identities=17%  Similarity=0.143  Sum_probs=145.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC-----CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEG-----ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +|+||||||+|+||++++++|+++|     ++|++++|+.....       ....++.++++|+++.++++++++.+   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~---   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL---   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC---
Confidence            4789999999999999999999999     99999999876532       12346788999999999888776532   


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEE-------EEcccCccCCC-----
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVV-------LISSIAGYQPQ-----  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv-------~iss~~~~~~~-----  154 (255)
                       +++|++||+||...          ++.++.+++|+.++.++++++.+...+..++|       ++||...+...     
T Consensus        71 -~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~  139 (364)
T 2v6g_A           71 -TDVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDP  139 (364)
T ss_dssp             -TTCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCS
T ss_pred             -CCCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCC
Confidence             23999999999642          12567889999999999999987643334676       68887543211     


Q ss_pred             ---------CCChhhHhhHHHHHHHHHHHHHHhCCC-eeEEEEeCCcccCCccccccCC--hh-HHHHH--HhhcccC--
Q 025273          155 ---------SSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGFVPTHFAEYITSN--DG-VRQTI--EQNTLLN--  217 (255)
Q Consensus       155 ---------~~~~~y~~sK~a~~~l~~~la~e~~~~-v~v~~v~pg~v~t~~~~~~~~~--~~-~~~~~--~~~~~~~--  217 (255)
                               +....|    .+.+.+++.++.+.  + +++..+.|+.+..+........  .. +....  ....+..  
T Consensus       140 ~~~E~~~~~~~~~~y----~~~E~~~~~~~~~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  213 (364)
T 2v6g_A          140 PYTEDLPRLKYMNFY----YDLEDIMLEEVEKK--EGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFT  213 (364)
T ss_dssp             SBCTTSCCCSSCCHH----HHHHHHHHHHHTTS--TTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCC
T ss_pred             CCCccccCCccchhh----HHHHHHHHHHhhcC--CCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecC
Confidence                     113356    33566666555433  4 8999999999988755322110  00 11112  1121111  


Q ss_pred             ----------CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          218 ----------RLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       218 ----------~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                                ...+.+|++++++.++....  ..|+++++.+|...
T Consensus       214 g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--~~g~~~ni~~~~~~  257 (364)
T 2v6g_A          214 GCKAAWDGYSDCSDADLIAEHHIWAAVDPY--AKNEAFNVSNGDVF  257 (364)
T ss_dssp             SCHHHHHSCBCCEEHHHHHHHHHHHHHCGG--GTTEEEEECCSCCB
T ss_pred             CCcccccccCCCCcHHHHHHHHHHHHhCCC--CCCceEEecCCCcC
Confidence                      22344889999988885432  36889999988654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.77  E-value=2.4e-18  Score=146.84  Aligned_cols=192  Identities=17%  Similarity=0.085  Sum_probs=140.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ++||||||+|+||++++++|+++|+ +|+.++|+                         ++.++++++++       ++|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~-------~~d   48 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL-------KAD   48 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH-------HCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc-------cCC
Confidence            4699999999999999999999998 88887775                         56777777776       489


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~  171 (255)
                      ++||+||.....         ..+..+++|+.++.++++++...- ...++|++||...+.    ...|+.+|.+.+.++
T Consensus        49 ~Vih~a~~~~~~---------~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~  114 (369)
T 3st7_A           49 FIVHLAGVNRPE---------HDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ----DNPYGESKLQGEQLL  114 (369)
T ss_dssp             EEEECCCSBCTT---------CSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS----CSHHHHHHHHHHHHH
T ss_pred             EEEECCcCCCCC---------CHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC----CCCchHHHHHHHHHH
Confidence            999999975421         123456789999999998886532 123899999988765    678999999999999


Q ss_pred             HHHHHHhCCCeeEEEEeCCcccCCccccccCC--hhHHHHHHhhccc--------CCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          172 KALAAEMAPDTRVNCVAPGFVPTHFAEYITSN--DGVRQTIEQNTLL--------NRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       172 ~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +.++++.  ++++..+.|+.+..+........  ..+........+.        ..+..++|+++.+..++..... ..
T Consensus       115 ~~~~~~~--g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~~  191 (369)
T 3st7_A          115 REYAEEY--GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPT-IE  191 (369)
T ss_dssp             HHHHHHH--CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCC-EE
T ss_pred             HHHHHHh--CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcc-cC
Confidence            9999887  67889999999887754321111  1111122222111        1244589999999998866543 23


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+.+++.+|...
T Consensus       192 ~~~~~i~~~~~~  203 (369)
T 3st7_A          192 NGVPTVPNVFKV  203 (369)
T ss_dssp             TTEECCSCCEEE
T ss_pred             CceEEeCCCCce
Confidence            788999887554

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.77  E-value=5.9e-18  Score=140.62  Aligned_cols=196  Identities=11%  Similarity=0.095  Sum_probs=129.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc-------hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-------KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +++||||||+|+||++++++|+++|++|++++|+.       +..+.+ +++..  ..+.++++|+++.+++.++++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--~~v~~v~~D~~d~~~l~~~~~---   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--LGVILLEGDINDHETLVKAIK---   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--TTCEEEECCTTCHHHHHHHHT---
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--CCCEEEEeCCCCHHHHHHHHh---
Confidence            46799999999999999999999999999999986       333332 23332  246788999999998887765   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----C-CCCCh
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----P-QSSMA  158 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----~-~~~~~  158 (255)
                          .+|++||+++...                    +.+..++++++...- .-+++|  .|..+..     + .+...
T Consensus        76 ----~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v--~S~~g~~~~~~~~~~p~~~  128 (307)
T 2gas_A           76 ----QVDIVICAAGRLL--------------------IEDQVKIIKAIKEAG-NVKKFF--PSEFGLDVDRHDAVEPVRQ  128 (307)
T ss_dssp             ----TCSEEEECSSSSC--------------------GGGHHHHHHHHHHHC-CCSEEE--CSCCSSCTTSCCCCTTHHH
T ss_pred             ----CCCEEEECCcccc--------------------cccHHHHHHHHHhcC-CceEEe--ecccccCcccccCCCcchh
Confidence                6999999999632                    234455555554321 134676  3433321     1 12245


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC------hhHHHHHHhhcccCCCCCHHHHHHHHHHh
Q 025273          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN------DGVRQTIEQNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  232 (255)
                      .| .+|.+++.+++.    .  +++++.++||++.+++...+...      ...............+..++|+++.+..+
T Consensus       129 ~y-~sK~~~e~~~~~----~--~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  201 (307)
T 2gas_A          129 VF-EEKASIRRVIEA----E--GVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRA  201 (307)
T ss_dssp             HH-HHHHHHHHHHHH----H--TCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHH----c--CCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHH
Confidence            78 999999987763    2  68888999999988755432211      00000000111223356899999999999


Q ss_pred             cCCCCCCccccEEEeCC
Q 025273          233 ASDDASYITGETLVVAG  249 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dg  249 (255)
                      +..+.  ..|+.+.+.|
T Consensus       202 l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          202 ANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HTCGG--GTTEEEECCC
T ss_pred             HcCcc--ccCceEEEeC
Confidence            87643  2367777765

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.77  E-value=2.7e-18  Score=145.26  Aligned_cols=201  Identities=11%  Similarity=0.028  Sum_probs=136.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc----hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ----KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ..++||||||+|+||++++++|+++|++|++++|+.    +..+. .+.+.  ...+.++++|+++.+++.+++++.   
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~---   82 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALE--DKGAIIVYGLINEQEAMEKILKEH---   82 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHH--HTTCEEEECCTTCHHHHHHHHHHT---
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHH--hCCcEEEEeecCCHHHHHHHHhhC---
Confidence            357899999999999999999999999999999986    22221 22232  246788999999999998888753   


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc----CCCCCChhhHh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY----QPQSSMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~----~~~~~~~~y~~  162 (255)
                        ++|+|||+++.                    .|+.+..++++++...- .-.++++ |+....    .+..+...|+.
T Consensus        83 --~~d~Vi~~a~~--------------------~n~~~~~~l~~aa~~~g-~v~~~v~-S~~g~~~~e~~~~~p~~~y~~  138 (346)
T 3i6i_A           83 --EIDIVVSTVGG--------------------ESILDQIALVKAMKAVG-TIKRFLP-SEFGHDVNRADPVEPGLNMYR  138 (346)
T ss_dssp             --TCCEEEECCCG--------------------GGGGGHHHHHHHHHHHC-CCSEEEC-SCCSSCTTTCCCCTTHHHHHH
T ss_pred             --CCCEEEECCch--------------------hhHHHHHHHHHHHHHcC-CceEEee-cccCCCCCccCcCCCcchHHH
Confidence              79999999986                    17778888888776542 1236664 443321    12355678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCCh------hHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSND------GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      +|.+++.+.+.      .++++..++||++.+..........      ..............+..++|+++.++.++..+
T Consensus       139 sK~~~e~~l~~------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~  212 (346)
T 3i6i_A          139 EKRRVRQLVEE------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDV  212 (346)
T ss_dssp             HHHHHHHHHHH------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCG
T ss_pred             HHHHHHHHHHH------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCc
Confidence            99999888764      2688899999988775432221100      00000001111223668999999999998765


Q ss_pred             CCCccccEEEeCC
Q 025273          237 ASYITGETLVVAG  249 (255)
Q Consensus       237 ~~~~~G~~i~~dg  249 (255)
                      .  ..|+.+++.|
T Consensus       213 ~--~~~~~~~i~g  223 (346)
T 3i6i_A          213 R--TLNKSVHFRP  223 (346)
T ss_dssp             G--GTTEEEECCC
T ss_pred             c--ccCeEEEEeC
Confidence            3  2366677753

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.72  E-value=4.6e-17  Score=135.57  Aligned_cols=201  Identities=12%  Similarity=0.081  Sum_probs=130.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-----hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-----NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++||||||+|+||++++++|+++|++|++++|+..     ..+.+ +++.  ...+.++++|+++.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~d~~~l~~~~~-----   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK--QLGAKLIEASLDDHQRLVDALK-----   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH--TTTCEEECCCSSCHHHHHHHHT-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH--hCCeEEEeCCCCCHHHHHHHHh-----
Confidence            367999999999999999999999999999999853     22221 2222  3467888999999999887765     


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----C-CCCChhh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----P-QSSMAMY  160 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----~-~~~~~~y  160 (255)
                        .+|++||+++.... .               .|+.+..++++++...- .-+++|+ |+.....     + .+....|
T Consensus        76 --~~d~vi~~a~~~~~-~---------------~~~~~~~~l~~aa~~~g-~v~~~v~-S~~g~~~~~~~~~~~p~~~~y  135 (313)
T 1qyd_A           76 --QVDVVISALAGGVL-S---------------HHILEQLKLVEAIKEAG-NIKRFLP-SEFGMDPDIMEHALQPGSITF  135 (313)
T ss_dssp             --TCSEEEECCCCSSS-S---------------TTTTTHHHHHHHHHHSC-CCSEEEC-SCCSSCTTSCCCCCSSTTHHH
T ss_pred             --CCCEEEECCccccc-h---------------hhHHHHHHHHHHHHhcC-CCceEEe-cCCcCCccccccCCCCCcchH
Confidence              69999999997531 1               15666677777665432 1347774 4332111     1 1235678


Q ss_pred             HhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC-------hhHHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN-------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                       .+|.+++.+.+    +.  ++++..+.||++.+++...+...       ...............+..++|+++.+..++
T Consensus       136 -~sK~~~e~~~~----~~--g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l  208 (313)
T 1qyd_A          136 -IDKRKVRRAIE----AA--SIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI  208 (313)
T ss_dssp             -HHHHHHHHHHH----HT--TCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred             -HHHHHHHHHHH----hc--CCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHH
Confidence             99999998875    22  67778889998865433222110       000000001111123568999999999998


Q ss_pred             CCCCCCccccEEEeCC
Q 025273          234 SDDASYITGETLVVAG  249 (255)
Q Consensus       234 s~~~~~~~G~~i~~dg  249 (255)
                      ..+.  ..|+.+.+.|
T Consensus       209 ~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          209 DDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             TCGG--GSSSEEECCC
T ss_pred             hCcc--cCCceEEEeC
Confidence            7643  2367777765

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.72  E-value=1.3e-16  Score=141.97  Aligned_cols=205  Identities=15%  Similarity=0.106  Sum_probs=139.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +++||||||+|+||++++++|+++|++|++++|+....+              .+.+|+.+..         .+.+.++|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------------~v~~d~~~~~---------~~~l~~~D  203 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------------KRFWDPLNPA---------SDLLDGAD  203 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------------CEECCTTSCC---------TTTTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------------ceeecccchh---------HHhcCCCC
Confidence            679999999999999999999999999999999976521              1567876431         12235899


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------CCCChhh
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMY  160 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y  160 (255)
                      +|||+||....    ...+.+..+..+++|+.++.++++++... ...+++|++||...+.+           ..+...|
T Consensus       204 ~Vih~A~~~~~----~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~-~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y  278 (516)
T 3oh8_A          204 VLVHLAGEPIF----GRFNDSHKEAIRESRVLPTKFLAELVAES-TQCTTMISASAVGFYGHDRGDEILTEESESGDDFL  278 (516)
T ss_dssp             EEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHHHC-SSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHH
T ss_pred             EEEECCCCccc----cccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeCcceEecCCCCCCccCCCCCCCcChH
Confidence            99999997532    13345557888999999999999975432 23459999999765531           1245678


Q ss_pred             HhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHh--------hcccCCCCCHHHHHHHHHHh
Q 025273          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ--------NTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~d~a~~~~~l  232 (255)
                      +.+|...+.+.+.+ .+  .+++++.+.||.+.++.....   ..+......        ......++.++|+++++..+
T Consensus       279 ~~~~~~~E~~~~~~-~~--~gi~~~ilRp~~v~Gp~~~~~---~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~  352 (516)
T 3oh8_A          279 AEVCRDWEHATAPA-SD--AGKRVAFIRTGVALSGRGGML---PLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRA  352 (516)
T ss_dssp             HHHHHHHHHTTHHH-HH--TTCEEEEEEECEEEBTTBSHH---HHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-Hh--CCCCEEEEEeeEEECCCCChH---HHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHH
Confidence            88888887765532 22  289999999999988642111   001100000        01112355789999999998


Q ss_pred             cCCCCCCccccEEEeCCCccc
Q 025273          233 ASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +....  ..| .+++.+|...
T Consensus       353 l~~~~--~~g-~~ni~~~~~~  370 (516)
T 3oh8_A          353 IVDAQ--ISG-PINAVAPNPV  370 (516)
T ss_dssp             HHCTT--CCE-EEEESCSCCE
T ss_pred             HhCcc--cCC-cEEEECCCCC
Confidence            86543  234 5788777543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.71  E-value=2.1e-17  Score=138.21  Aligned_cols=197  Identities=12%  Similarity=0.073  Sum_probs=125.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc-h----hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-K----NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~-~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++|||||+|+||++++++|+++|++|++++|+. .    ......+.+..  ..+.++++|+++.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~~-----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVLK-----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHHc-----
Confidence            36799999999999999999999999999999986 2    11112222322  357788999999999888775     


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC---C---CCChhh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP---Q---SSMAMY  160 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~---~---~~~~~y  160 (255)
                        .+|++||+++...                    +.+..++++++...- .-+++|  .|..+...   .   +....|
T Consensus        77 --~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v--~S~~g~~~~~~~~~~p~~~~y  131 (321)
T 3c1o_A           77 --QVDIVISALPFPM--------------------ISSQIHIINAIKAAG-NIKRFL--PSDFGCEEDRIKPLPPFESVL  131 (321)
T ss_dssp             --TCSEEEECCCGGG--------------------SGGGHHHHHHHHHHC-CCCEEE--CSCCSSCGGGCCCCHHHHHHH
T ss_pred             --CCCEEEECCCccc--------------------hhhHHHHHHHHHHhC-CccEEe--ccccccCccccccCCCcchHH
Confidence              6999999998531                    334455555554321 034776  34333211   1   114578


Q ss_pred             HhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC------ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS------NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                       .+|.+++.+++.    .  ++++..+.||++.+++...+..      ................+..++|+++.+..++.
T Consensus       132 -~sK~~~e~~~~~----~--~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~  204 (321)
T 3c1o_A          132 -EKKRIIRRAIEA----A--ALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVAC  204 (321)
T ss_dssp             -HHHHHHHHHHHH----H--TCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHH----c--CCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHh
Confidence             999999988863    2  5677788899876643321111      00000000011122236689999999999886


Q ss_pred             CCCCCccccEEEeCC
Q 025273          235 DDASYITGETLVVAG  249 (255)
Q Consensus       235 ~~~~~~~G~~i~~dg  249 (255)
                      .+.  ..|+.+.+.|
T Consensus       205 ~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          205 DPR--CCNRIVIYRP  217 (321)
T ss_dssp             CGG--GTTEEEECCC
T ss_pred             Ccc--ccCeEEEEeC
Confidence            543  2377788775

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.69  E-value=5.5e-17  Score=135.54  Aligned_cols=197  Identities=13%  Similarity=0.104  Sum_probs=124.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||+|+||++++++|+++|++|++++|+.+......+++..  ..+.++++|+++.+++.++++       .+|+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~~-------~~d~   82 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--LGAIIVKGELDEHEKLVELMK-------KVDV   82 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--CCCEEEEecCCCHHHHHHHHc-------CCCE
Confidence            6799999999999999999999999999999987522222223332  256788999999999888775       6999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC--C---CCChhhHhhHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP--Q---SSMAMYGVTKTAL  167 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~--~---~~~~~y~~sK~a~  167 (255)
                      +||+++...                    +.+..++++++...- ..+++|+ |+......  .   +....| .+|.++
T Consensus        83 vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~  139 (318)
T 2r6j_A           83 VISALAFPQ--------------------ILDQFKILEAIKVAG-NIKRFLP-SDFGVEEDRINALPPFEALI-ERKRMI  139 (318)
T ss_dssp             EEECCCGGG--------------------STTHHHHHHHHHHHC-CCCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHHHH
T ss_pred             EEECCchhh--------------------hHHHHHHHHHHHhcC-CCCEEEe-eccccCcccccCCCCcchhH-HHHHHH
Confidence            999998531                    223344555544321 1346763 43321111  1   113468 999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC---hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN---DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      +.+.+.    .  ++++..+.||++..++...+...   ...............+..++|+++.+..++..+..  .|+.
T Consensus       140 e~~~~~----~--~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~--~~~~  211 (318)
T 2r6j_A          140 RRAIEE----A--NIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA--LNRV  211 (318)
T ss_dssp             HHHHHH----T--TCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG--TTEE
T ss_pred             HHHHHh----c--CCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccc--cCeE
Confidence            888763    2  67778889988765432211100   00000000111122356799999999999876432  3666


Q ss_pred             EEeCC
Q 025273          245 LVVAG  249 (255)
Q Consensus       245 i~~dg  249 (255)
                      +.+.|
T Consensus       212 ~~~~g  216 (318)
T 2r6j_A          212 VIYRP  216 (318)
T ss_dssp             EECCC
T ss_pred             EEecC
Confidence            77654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.69  E-value=1.3e-16  Score=132.54  Aligned_cols=198  Identities=11%  Similarity=0.074  Sum_probs=125.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhH---HH--HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV---DE--AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++|+||||+|+||++++++|+++|++|++++|+....   +.  ..+.+.  ...+.++++|+++.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc-----
Confidence            36799999999999999999999999999999985321   11  112222  3457788999999999888776     


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC----C-CCCChhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ----P-QSSMAMYG  161 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~----~-~~~~~~y~  161 (255)
                        .+|++||+++...                    +.+..++++++...- .-+++|+ |+.....    + .+....| 
T Consensus        77 --~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v~-S~~g~~~~~~~~~~p~~~~y-  131 (308)
T 1qyc_A           77 --NVDVVISTVGSLQ--------------------IESQVNIIKAIKEVG-TVKRFFP-SEFGNDVDNVHAVEPAKSVF-  131 (308)
T ss_dssp             --TCSEEEECCCGGG--------------------SGGGHHHHHHHHHHC-CCSEEEC-SCCSSCTTSCCCCTTHHHHH-
T ss_pred             --CCCEEEECCcchh--------------------hhhHHHHHHHHHhcC-CCceEee-cccccCccccccCCcchhHH-
Confidence              6899999998531                    233445555554421 1347763 4433221    1 1224568 


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC------hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      .+|.+++.+.+.    .  ++++..+.||++.+++...+...      ...............+..++|+++.+..++..
T Consensus       132 ~sK~~~e~~~~~----~--~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  205 (308)
T 1qyc_A          132 EVKAKVRRAIEA----E--GIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDD  205 (308)
T ss_dssp             HHHHHHHHHHHH----H--TCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSC
T ss_pred             HHHHHHHHHHHh----c--CCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhC
Confidence            999999888763    2  57778889998765433221110      00000000111122356789999999999865


Q ss_pred             CCCCccccEEEeCC
Q 025273          236 DASYITGETLVVAG  249 (255)
Q Consensus       236 ~~~~~~G~~i~~dg  249 (255)
                      +.  ..|+.+.+.|
T Consensus       206 ~~--~~~~~~~~~g  217 (308)
T 1qyc_A          206 PR--TLNKTLYLRL  217 (308)
T ss_dssp             GG--GTTEEEECCC
T ss_pred             cc--ccCeEEEEeC
Confidence            43  2367777764

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.63  E-value=2.7e-14  Score=118.17  Aligned_cols=204  Identities=17%  Similarity=0.168  Sum_probs=131.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++||||||+|.||++++++|.++|++|+++.|++..            .++   ..|     .+.      .+.+..+|.
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~~---~~~-----~~~------~~~l~~~d~   54 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GRI---TWD-----ELA------ASGLPSCDA   54 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TEE---EHH-----HHH------HHCCCSCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Cee---ecc-----hhh------HhhccCCCE
Confidence            469999999999999999999999999999998643            111   111     110      123458999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------CCCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QSSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~  161 (255)
                      +||+||... .......+....+..++.|+.++.++.+.+...-.+...+|+.||...+.+           ..+...|+
T Consensus        55 vihla~~~i-~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~  133 (298)
T 4b4o_A           55 AVNLAGENI-LNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFS  133 (298)
T ss_dssp             EEECCCCCS-SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHH
T ss_pred             EEEeccCcc-cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhH
Confidence            999998543 233334456667788899999999998877665445567888888765532           22334455


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHH--------hhcccCCCCCHHHHHHHHHHh
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIE--------QNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~d~a~~~~~l  232 (255)
                      ..|...+..     ..... ++++..+.|+.+..+-.....   .+.....        .......+...+|+++++.++
T Consensus       134 ~~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~~~~~---~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~  205 (298)
T 4b4o_A          134 NLVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRGGGAMG---HMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHA  205 (298)
T ss_dssp             HHHHHHHHH-----HCCSSSSSEEEEEEECEEECTTSHHHH---HHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHH-----HHhhccCCceeeeeeeeEEcCCCCchh---HHHHHHhcCCcceecccCceeecCcHHHHHHHHHHH
Confidence            555544422     12223 889999999999876422111   0111000        111122345689999999988


Q ss_pred             cCCCCCCccccEEEeCCCcccC
Q 025273          233 ASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +..+.  ..| .+++.++.+.+
T Consensus       206 ~~~~~--~~g-~yn~~~~~~~t  224 (298)
T 4b4o_A          206 LEANH--VHG-VLNGVAPSSAT  224 (298)
T ss_dssp             HHCTT--CCE-EEEESCSCCCB
T ss_pred             HhCCC--CCC-eEEEECCCccC
Confidence            86543  244 78888877653

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.49  E-value=2.1e-15  Score=124.34  Aligned_cols=110  Identities=23%  Similarity=0.277  Sum_probs=81.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+||+|+++++.|+++|++|++++|+.++++.+.+++... ..+.++.+|+++.++++++++       
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK-------  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT-------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH-------
Confidence            468999999999999999999999999999999999988888877776542 135567899999998877665       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCH-HHHHHHHHHHhHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKE-SVLDKLWDINVKSSI  126 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  126 (255)
                      .+|++|||+|......+..+.+. +.++..+++|+.+++
T Consensus       188 ~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            58999999986432222211221 334445666666555

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.40  E-value=6.2e-13  Score=111.50  Aligned_cols=150  Identities=15%  Similarity=0.103  Sum_probs=104.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEeCCc--hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQ--KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      ++|+||||+|+||++++..|+++|+       .|++++++.  +.++.....+......  ++ .|+++..++.+.+   
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~--~~-~di~~~~~~~~a~---   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFP--LL-AGLEATDDPKVAF---   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT--TE-EEEEEESCHHHHT---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccc--cc-CCeEeccChHHHh---
Confidence            5799999999999999999999996       799999875  2233323333321111  12 4665544444433   


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc--------cC-CC
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--------YQ-PQ  154 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~--------~~-~~  154 (255)
                          ...|++||.||.....    ..+   ..+.++.|+.++.++++++..+-....+++++|+...        .. +.
T Consensus        79 ----~~~D~Vih~Ag~~~~~----~~~---~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~  147 (327)
T 1y7t_A           79 ----KDADYALLVGAAPRKA----GME---RRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGL  147 (327)
T ss_dssp             ----TTCSEEEECCCCCCCT----TCC---HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTS
T ss_pred             ----CCCCEEEECCCcCCCC----CCC---HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCC
Confidence                3799999999975421    223   3457899999999999988875323457888887541        11 24


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhC
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMA  179 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~  179 (255)
                      ++...|+.+|...+.+.+.++..++
T Consensus       148 ~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          148 NPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             ChhheeccchHHHHHHHHHHHHHhC
Confidence            4566799999999999999998774

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.21  E-value=5.1e-11  Score=93.62  Aligned_cols=79  Identities=18%  Similarity=0.183  Sum_probs=61.9

Q ss_pred             cCCCCEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC
Q 025273            9 RFQGKVAIVTAS----------------TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN   72 (255)
Q Consensus         9 ~l~~k~vlItGa----------------~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   72 (255)
                      +|+||+||||||                ||++|+++|+.|+++|+.|++++++.. ++        ....+  -.+|+++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~~~g~--~~~dv~~   73 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------TPPFV--KRVDVMT   73 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------CCTTE--EEEECCS
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------cCCCC--eEEccCc
Confidence            478999999999                689999999999999999999988752 11        01112  2468887


Q ss_pred             HHHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 025273           73 GQQRKNLINQTIEKFGKIDVVVSNAAANP  101 (255)
Q Consensus        73 ~~~v~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      .++   +++.+.+.++++|++|||||+..
T Consensus        74 ~~~---~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           74 ALE---MEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHH---HHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHH---HHHHHHHhcCCCCEEEECCcccC
Confidence            544   56677778899999999999864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.06  E-value=7.2e-10  Score=78.28  Aligned_cols=74  Identities=19%  Similarity=0.102  Sum_probs=61.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +++++|+|+ |++|+++++.|.+.| ++|++++|+++.++.+.      ...+.++.+|+++.++++++++       .+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~~   70 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKALG-------GF   70 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHHc-------CC
Confidence            578999999 999999999999999 88999999987666543      2345668899999888777654       79


Q ss_pred             CEEEEcCCC
Q 025273           91 DVVVSNAAA   99 (255)
Q Consensus        91 d~lv~~ag~   99 (255)
                      |++|++++.
T Consensus        71 d~vi~~~~~   79 (118)
T 3ic5_A           71 DAVISAAPF   79 (118)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEECCCc
Confidence            999999863

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.06  E-value=3e-10  Score=89.47  Aligned_cols=79  Identities=19%  Similarity=0.227  Sum_probs=59.5

Q ss_pred             CCCEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHH
Q 025273           11 QGKVAIVTAS----------------TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ   74 (255)
Q Consensus        11 ~~k~vlItGa----------------~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   74 (255)
                      +||+||||||                ||++|.++|+.|+++|+.|++++|.... ..      ..+..+.  ..|+.   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~------~~~~~~~--~~~v~---   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP------EPHPNLS--IREIT---   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC------CCCTTEE--EEECC---
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc------cCCCCeE--EEEHh---
Confidence            5899999999                7889999999999999999999997532 10      0011222  23444   


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAANP  101 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      +++++++.+.+.++++|++|||||+..
T Consensus        70 s~~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           70 NTKDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence            566677777788889999999999865

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=99.00  E-value=4.4e-10  Score=84.01  Aligned_cols=78  Identities=17%  Similarity=0.135  Sum_probs=65.8

Q ss_pred             CCchHHHHHHHHHHcCCeEEEEeCCchhHH---HHHHHHHhcCCeEEEEEecCCCH--HHHHHHHHHHHHHhCCCCEEEE
Q 025273           21 TQGIGFGIAERLGLEGASVVVSSRKQKNVD---EAVVKLKARGIEVIGVVCHVSNG--QQRKNLINQTIEKFGKIDVVVS   95 (255)
Q Consensus        21 ~~giG~~~a~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~~d~lv~   95 (255)
                      ++.++.+.++.|+++|++|++.+|+....+   ...+.+...+.++..+++|++++  ++++++++.+.+.+|+ |+|||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            345789999999999999999988765432   23455666688999999999999  9999999999988998 99999


Q ss_pred             cCCC
Q 025273           96 NAAA   99 (255)
Q Consensus        96 ~ag~   99 (255)
                      |||+
T Consensus       104 nAgg  107 (157)
T 3gxh_A          104 CLAN  107 (157)
T ss_dssp             CSBS
T ss_pred             CCCC
Confidence            9996

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.96  E-value=1.1e-09  Score=84.86  Aligned_cols=103  Identities=17%  Similarity=0.244  Sum_probs=73.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++||||||+||||+++++.+...|++|++++|+++..+...    ..+...   .+|.++.+..+.+.+...  .+.+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g~~~---~~d~~~~~~~~~~~~~~~--~~~~  108 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLGVEY---VGDSRSVDFADEILELTD--GYGV  108 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTCCSE---EEETTCSTHHHHHHHHTT--TCCE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCCE---EeeCCcHHHHHHHHHHhC--CCCC
Confidence            5799999999999999999999999999999999977654432    223332   357776554443333221  1369


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |++|+|+|.    .                       ..+..++.++++|+++.+++..
T Consensus       109 D~vi~~~g~----~-----------------------~~~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A          109 DVVLNSLAG----E-----------------------AIQRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             EEEEECCCT----H-----------------------HHHHHHHTEEEEEEEEECSCGG
T ss_pred             eEEEECCch----H-----------------------HHHHHHHHhccCCEEEEEcCCC
Confidence            999999872    0                       1344567788889999998754

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.95  E-value=5.5e-09  Score=89.91  Aligned_cols=81  Identities=19%  Similarity=0.240  Sum_probs=70.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcC---CeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEG---ASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++|+|+|| |+||+++++.|+++|   ..|++++|+.++++.+.+++... +.++..+++|+++.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            57999999 899999999999998   38999999999999888887654 346888999999999999998876     


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      ++|++||+++.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            69999999985

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.94  E-value=2.1e-09  Score=90.17  Aligned_cols=104  Identities=13%  Similarity=0.249  Sum_probs=76.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++||||||+||||.++++.++..|++|++++|+.++++.+ +++   +..   ..+|.++.+++.+.+.++..  +.+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~---~~~d~~~~~~~~~~~~~~~~--~~~  215 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFD---AAFNYKTVNSLEEALKKASP--DGY  215 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS---EEEETTSCSCHHHHHHHHCT--TCE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCc---EEEecCCHHHHHHHHHHHhC--CCC
Confidence            579999999999999999999999999999999998776654 333   332   23588774455555544432  579


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      |++|+|+|.            +               ..+..++.++++|+++.++...+
T Consensus       216 d~vi~~~g~------------~---------------~~~~~~~~l~~~G~~v~~g~~~~  248 (333)
T 1v3u_A          216 DCYFDNVGG------------E---------------FLNTVLSQMKDFGKIAICGAISV  248 (333)
T ss_dssp             EEEEESSCH------------H---------------HHHHHHTTEEEEEEEEECCCCC-
T ss_pred             eEEEECCCh------------H---------------HHHHHHHHHhcCCEEEEEecccc
Confidence            999999982            0               12445677888899999987544

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.91  E-value=3.4e-09  Score=90.17  Aligned_cols=107  Identities=13%  Similarity=0.145  Sum_probs=77.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++++|+|+|+ |+||+++++.+...|++|++++|+.++++.+.+.+   +..   +.+|.++.+++++.++       
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~-------  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ-------  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh-------
Confidence            478999999999 99999999999999999999999987766554333   233   4567788877776654       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      ..|++|++++.....                    .+..+.+..++.|++++.||++++..
T Consensus       229 ~~DvVi~~~g~~~~~--------------------~~~li~~~~l~~mk~gg~iV~v~~~~  269 (369)
T 2eez_A          229 HADLLIGAVLVPGAK--------------------APKLVTRDMLSLMKEGAVIVDVAVDQ  269 (369)
T ss_dssp             HCSEEEECCC---------------------------CCSCHHHHTTSCTTCEEEECC---
T ss_pred             CCCEEEECCCCCccc--------------------cchhHHHHHHHhhcCCCEEEEEecCC
Confidence            589999999864210                    11223456678888889999999754

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.84  E-value=8.8e-09  Score=86.83  Aligned_cols=104  Identities=13%  Similarity=0.145  Sum_probs=77.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+|++|+||+++++.+...|++|++++|+.++++... +   .+..   ..+|.++.+++.+.+.++..  +.+
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~---~g~~---~~~d~~~~~~~~~~~~~~~~--~~~  239 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S---IGGE---VFIDFTKEKDIVGAVLKATD--GGA  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-H---TTCC---EEEETTTCSCHHHHHHHHHT--SCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-H---cCCc---eEEecCccHhHHHHHHHHhC--CCC
Confidence            5799999999999999999999999999999999987765432 2   2333   23488765666666555433  269


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |++|+++|..                          ...+.+++.++++|+++.+++..
T Consensus       240 D~vi~~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  272 (347)
T 2hcy_A          240 HGVINVSVSE--------------------------AAIEASTRYVRANGTTVLVGMPA  272 (347)
T ss_dssp             EEEEECSSCH--------------------------HHHHHHTTSEEEEEEEEECCCCT
T ss_pred             CEEEECCCcH--------------------------HHHHHHHHHHhcCCEEEEEeCCC
Confidence            9999999831                          03456678888889999998754

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.79  E-value=9.6e-09  Score=85.85  Aligned_cols=104  Identities=16%  Similarity=0.151  Sum_probs=74.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++||||||+|+||.++++.+...|++|++++|++++++.+.+ +   +...   .+|.++.+..+.+.+...  ...+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~~~~~~~~~~~~--~~~~  210 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERLKEITG--GKKV  210 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHTT--TCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCccHHHHHHHHhC--CCCc
Confidence            58999999999999999999999999999999999877665433 2   3332   347776554444333221  1269


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      |++|+|+|. .                          ..+..++.++++|+++.+++..+
T Consensus       211 D~vi~~~g~-~--------------------------~~~~~~~~l~~~G~iv~~g~~~~  243 (327)
T 1qor_A          211 RVVYDSVGR-D--------------------------TWERSLDCLQRRGLMVSFGNSSG  243 (327)
T ss_dssp             EEEEECSCG-G--------------------------GHHHHHHTEEEEEEEEECCCTTC
T ss_pred             eEEEECCch-H--------------------------HHHHHHHHhcCCCEEEEEecCCC
Confidence            999999982 1                          12445677888899999987654

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.76  E-value=1.5e-08  Score=88.32  Aligned_cols=78  Identities=14%  Similarity=0.092  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++|+|+|+| +|++|+++++.|++.|++|++++|+.++++.+.++    ...+..+++|+++.++++++++       ++
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~----~~~~~~~~~Dv~d~~~l~~~l~-------~~   69 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----VQHSTPISLDVNDDAALDAEVA-------KH   69 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT----CTTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh----cCCceEEEeecCCHHHHHHHHc-------CC
Confidence            368899998 79999999999999999999999997665544322    2246778899999888877664       79


Q ss_pred             CEEEEcCCCC
Q 025273           91 DVVVSNAAAN  100 (255)
Q Consensus        91 d~lv~~ag~~  100 (255)
                      |++||+++..
T Consensus        70 DvVIn~a~~~   79 (450)
T 1ff9_A           70 DLVISLIPYT   79 (450)
T ss_dssp             SEEEECCC--
T ss_pred             cEEEECCccc
Confidence            9999999864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.76  E-value=2.4e-08  Score=83.67  Aligned_cols=103  Identities=17%  Similarity=0.169  Sum_probs=74.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+||+|+||.++++.+...|++|++++|+.++++.+.+ +   +...   .+|.++.+..+++.+...  ...+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g~~~---~~d~~~~~~~~~i~~~~~--~~~~  215 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L---GCHH---TINYSTQDFAEVVREITG--GKGV  215 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHHT--TCCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCHHHHHHHHHHhC--CCCC
Confidence            57999999999999999999999999999999999877665432 3   3332   347776554444333221  1369


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |++|+|+|. .                          ..+.+++.++++|+++.+++..
T Consensus       216 d~vi~~~g~-~--------------------------~~~~~~~~l~~~G~iv~~g~~~  247 (333)
T 1wly_A          216 DVVYDSIGK-D--------------------------TLQKSLDCLRPRGMCAAYGHAS  247 (333)
T ss_dssp             EEEEECSCT-T--------------------------THHHHHHTEEEEEEEEECCCTT
T ss_pred             eEEEECCcH-H--------------------------HHHHHHHhhccCCEEEEEecCC
Confidence            999999984 1                          1334566778889999988654

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.72  E-value=1e-08  Score=86.25  Aligned_cols=105  Identities=16%  Similarity=0.264  Sum_probs=75.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+||+|+||..+++.+...|++|++++|+.++++.+++++   +...   .+|.++.+++.+.+.++..  +.+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~~--~~~  226 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLTAALKRCFP--NGI  226 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCSE---EEETTSCSCSHHHHHHHCT--TCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCce---EEecCCHHHHHHHHHHHhC--CCC
Confidence            5799999999999999999999999999999999987766543222   3332   2477655444444444321  479


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      |++|+++|. .                          ..+..++.++++|+++.++...+
T Consensus       227 d~vi~~~g~-~--------------------------~~~~~~~~l~~~G~~v~~G~~~~  259 (345)
T 2j3h_A          227 DIYFENVGG-K--------------------------MLDAVLVNMNMHGRIAVCGMISQ  259 (345)
T ss_dssp             EEEEESSCH-H--------------------------HHHHHHTTEEEEEEEEECCCGGG
T ss_pred             cEEEECCCH-H--------------------------HHHHHHHHHhcCCEEEEEccccc
Confidence            999999882 0                          13455677888899999876543

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.70  E-value=3e-11  Score=104.75  Aligned_cols=44  Identities=32%  Similarity=0.373  Sum_probs=38.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV   53 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   53 (255)
                      .+.||+|+|||++ +||+++++.|++.|++|+++++++..++...
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            4789999999987 9999999999999999999999976655443

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.70  E-value=3.9e-09  Score=86.68  Aligned_cols=81  Identities=11%  Similarity=0.220  Sum_probs=60.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|+++|||++ |+|+++++.|+++| +|++++|+.++++.+.+++.........+.+|+++.          .+.++
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~  192 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLD  192 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCT
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhC
Confidence            4789999999997 99999999999999 999999999888887777643210000123444431          23356


Q ss_pred             CCCEEEEcCCCCC
Q 025273           89 KIDVVVSNAAANP  101 (255)
Q Consensus        89 ~~d~lv~~ag~~~  101 (255)
                      ++|++|||+|...
T Consensus       193 ~~DilVn~ag~~~  205 (287)
T 1nvt_A          193 GVDIIINATPIGM  205 (287)
T ss_dssp             TCCEEEECSCTTC
T ss_pred             CCCEEEECCCCCC
Confidence            8999999999754

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.67  E-value=5.8e-08  Score=81.39  Aligned_cols=104  Identities=18%  Similarity=0.247  Sum_probs=74.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+||+|+||.++++.+...|++|++++|++++++.+.+++   +...   ..|.++.+-.+.+.+ ..  .+.+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~~-~~--~~~~  219 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDG---AIDYKNEDLAAGLKR-EC--PKGI  219 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSE---EEETTTSCHHHHHHH-HC--TTCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCE---EEECCCHHHHHHHHH-hc--CCCc
Confidence            5899999999999999999999999999999999987766553333   3322   246665443333322 21  2479


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      |++|+|+|..                           ..+.+++.++++|+++.++....
T Consensus       220 d~vi~~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~~  252 (336)
T 4b7c_A          220 DVFFDNVGGE---------------------------ILDTVLTRIAFKARIVLCGAISQ  252 (336)
T ss_dssp             EEEEESSCHH---------------------------HHHHHHTTEEEEEEEEECCCGGG
T ss_pred             eEEEECCCcc---------------------------hHHHHHHHHhhCCEEEEEeeccc
Confidence            9999999830                           23445677888899999987653

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.67  E-value=2.2e-07  Score=76.91  Aligned_cols=84  Identities=15%  Similarity=0.263  Sum_probs=64.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCC---chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK---QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      .++++|++||+|+ ||+|++++..|++.|+ +|++++|+   .++++.+.+++....+ ..+...++.+.+++.+.+.  
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l~--  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEIA--  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhhc--
Confidence            3578999999997 7999999999999998 79999999   7888888777765422 2223346666665554443  


Q ss_pred             HHHhCCCCEEEEcCCCC
Q 025273           84 IEKFGKIDVVVSNAAAN  100 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~  100 (255)
                           ..|+|||+....
T Consensus       226 -----~aDiIINaTp~G  237 (315)
T 3tnl_A          226 -----ESVIFTNATGVG  237 (315)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----CCCEEEECccCC
Confidence                 689999998653

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.65  E-value=4.4e-08  Score=82.84  Aligned_cols=104  Identities=14%  Similarity=0.225  Sum_probs=73.2

Q ss_pred             CC--CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QG--KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~--k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .|  ++|||+||+|+||.++++.+...|+ +|++++++.++++.+.+++   +..   ..+|.++.+..+. +.+..  .
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~---~~~d~~~~~~~~~-~~~~~--~  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFD---AAINYKKDNVAEQ-LRESC--P  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCS---EEEETTTSCHHHH-HHHHC--T
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc---eEEecCchHHHHH-HHHhc--C
Confidence            46  9999999999999999999999999 9999999977666544322   332   2357766433222 22221  1


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      +.+|++|+|+|.            +               ..+.+++.++++|+++.++...+
T Consensus       229 ~~~d~vi~~~G~------------~---------------~~~~~~~~l~~~G~iv~~G~~~~  264 (357)
T 2zb4_A          229 AGVDVYFDNVGG------------N---------------ISDTVISQMNENSHIILCGQISQ  264 (357)
T ss_dssp             TCEEEEEESCCH------------H---------------HHHHHHHTEEEEEEEEECCCGGG
T ss_pred             CCCCEEEECCCH------------H---------------HHHHHHHHhccCcEEEEECCccc
Confidence            269999999982            0               23345677888899999887544

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.65  E-value=6.6e-08  Score=84.44  Aligned_cols=80  Identities=18%  Similarity=0.196  Sum_probs=62.7

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++++++|+|+|+ |++|+++++.|++. |++|++++|+.++++.+.+.     ..+..+.+|+++.+++.++++     
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~-----   87 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA-----   87 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH-----
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc-----
Confidence            3577899999997 99999999999998 78899999998776665433     134567899999888777664     


Q ss_pred             hCCCCEEEEcCCCC
Q 025273           87 FGKIDVVVSNAAAN  100 (255)
Q Consensus        87 ~g~~d~lv~~ag~~  100 (255)
                        .+|+|||+++..
T Consensus        88 --~~DvVIn~tp~~   99 (467)
T 2axq_A           88 --DNDVVISLIPYT   99 (467)
T ss_dssp             --TSSEEEECSCGG
T ss_pred             --CCCEEEECCchh
Confidence              699999999864

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.65  E-value=5.9e-08  Score=82.00  Aligned_cols=103  Identities=17%  Similarity=0.209  Sum_probs=72.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+||+|+||.++++.+...|++|++++|++++++.+ +++   +..   ..+|.++.+..+.+.+...  .+.+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~~--~~~~  232 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAA---AGFNYKKEDFSEATLKFTK--GAGV  232 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCS---EEEETTTSCHHHHHHHHTT--TSCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc---EEEecCChHHHHHHHHHhc--CCCc
Confidence            479999999999999999999999999999999998776655 333   333   2357766544333322110  1269


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |++|+|+|...                           .+..++.++++|+++.++...
T Consensus       233 d~vi~~~G~~~---------------------------~~~~~~~l~~~G~iv~~G~~~  264 (354)
T 2j8z_A          233 NLILDCIGGSY---------------------------WEKNVNCLALDGRWVLYGLMG  264 (354)
T ss_dssp             EEEEESSCGGG---------------------------HHHHHHHEEEEEEEEECCCTT
T ss_pred             eEEEECCCchH---------------------------HHHHHHhccCCCEEEEEeccC
Confidence            99999998410                           233456677889999988654

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.63  E-value=3.8e-09  Score=93.82  Aligned_cols=100  Identities=15%  Similarity=0.151  Sum_probs=63.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|+++|||| ||+|+++++.|+++|++|++++|+.++++.+.+++.   .++.    ++.+   ++++      ..+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~----~~~d---l~~~------~~~  423 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKAL----SLTD---LDNY------HPE  423 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CE----ETTT---TTTC--------C
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---Ccee----eHHH---hhhc------ccc
Confidence            467899999999 599999999999999999999999888777766552   2221    2221   1110      113


Q ss_pred             CCCEEEEcCCCCCCC----CCccCCCHHHHHHHHHHHhHHH
Q 025273           89 KIDVVVSNAAANPSV----DSILQTKESVLDKLWDINVKSS  125 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~  125 (255)
                      .+|++|||+|.....    .++.+.+.+.+..++++|+.+.
T Consensus       424 ~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          424 DGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             CSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             CceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            589999999975321    3444455555666677776543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.61  E-value=2e-07  Score=77.89  Aligned_cols=151  Identities=11%  Similarity=0.095  Sum_probs=101.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEeCC----chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRK----QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      .++|+||||+|++|++++..|+..|.       .|++++++    .++++....++......+.   .|+....+..+. 
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~a-   80 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTA-   80 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHH-
Confidence            46899999999999999999999885       79999998    5545554455544211111   233332233333 


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc--------cC
Q 025273           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--------YQ  152 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~--------~~  152 (255)
                            +...|++||.||....    ...+.   .+.+..|+.....+.+.+..+-.+.++++++|....        ..
T Consensus        81 ------l~~aD~Vi~~ag~~~~----~g~~r---~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~  147 (329)
T 1b8p_A           81 ------FKDADVALLVGARPRG----PGMER---KDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSA  147 (329)
T ss_dssp             ------TTTCSEEEECCCCCCC----TTCCH---HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTC
T ss_pred             ------hCCCCEEEEeCCCCCC----CCCCH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHc
Confidence                  3378999999997542    12233   345788999999898888776434568999987442        12


Q ss_pred             -CCCCChhhHhhHHHHHHHHHHHHHHhC
Q 025273          153 -PQSSMAMYGVTKTALLGLTKALAAEMA  179 (255)
Q Consensus       153 -~~~~~~~y~~sK~a~~~l~~~la~e~~  179 (255)
                       .++....|+.++.--..+.+.++..++
T Consensus       148 ~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          148 PSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             TTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence             334445688887666777788888874

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.56  E-value=2.3e-07  Score=67.58  Aligned_cols=75  Identities=15%  Similarity=0.241  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +.++++|+|+ |.+|+++++.|.++|+.|++++++++..+.+.+    .  .+.++..|.++++.++++      ...+.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~--~~~~~~gd~~~~~~l~~~------~~~~~   71 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E--GFDAVIADPTDESFYRSL------DLEGV   71 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEECCTTCHHHHHHS------CCTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C--CCcEEECCCCCHHHHHhC------CcccC
Confidence            4578999998 779999999999999999999999876655432    2  345678999998876654      12368


Q ss_pred             CEEEEcCC
Q 025273           91 DVVVSNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      |.+|.+.+
T Consensus        72 d~vi~~~~   79 (141)
T 3llv_A           72 SAVLITGS   79 (141)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEecC
Confidence            99998766

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.54  E-value=1.1e-07  Score=79.98  Aligned_cols=104  Identities=17%  Similarity=0.228  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|++|||+|++|+||..+++.+... |++|+++++++++++.++ ++   +...   ..|.++.+..+++ .++... +.
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~---g~~~---~~~~~~~~~~~~~-~~~~~~-~~  240 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA---GADY---VINASMQDPLAEI-RRITES-KG  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHHHH-HHHTTT-SC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCCE---EecCCCccHHHHH-HHHhcC-CC
Confidence            5799999999999999999999999 999999999987766543 33   3332   2466654433322 222110 47


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      +|++|+++|..                          ...+.+++.++++|+++.++...
T Consensus       241 ~d~vi~~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  274 (347)
T 1jvb_A          241 VDAVIDLNNSE--------------------------KTLSVYPKALAKQGKYVMVGLFG  274 (347)
T ss_dssp             EEEEEESCCCH--------------------------HHHTTGGGGEEEEEEEEECCSSC
T ss_pred             ceEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEECCCC
Confidence            99999999841                          12344567778889999987654

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.54  E-value=1.3e-07  Score=76.88  Aligned_cols=77  Identities=12%  Similarity=0.188  Sum_probs=58.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++++.+.+++...+ .+.  .+|+   +++.       +  +
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~~-------~--~  179 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DELE-------G--H  179 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGGT-------T--C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HHhc-------c--C
Confidence            467999999998 799999999999999999999999988888777664322 221  2333   2211       1  5


Q ss_pred             CCCEEEEcCCCCC
Q 025273           89 KIDVVVSNAAANP  101 (255)
Q Consensus        89 ~~d~lv~~ag~~~  101 (255)
                      ..|++||+++...
T Consensus       180 ~~DivVn~t~~~~  192 (271)
T 1nyt_A          180 EFDLIINATSSGI  192 (271)
T ss_dssp             CCSEEEECCSCGG
T ss_pred             CCCEEEECCCCCC
Confidence            8999999999643

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.53  E-value=6.4e-08  Score=70.53  Aligned_cols=77  Identities=16%  Similarity=0.193  Sum_probs=56.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++++++|+|+ |.+|+.+++.|.+.|++|++++++.+..+.+    ...+  ..++..|.++.+.++++      ..++
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~~--~~~~~~d~~~~~~l~~~------~~~~   70 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA--THAVIANATEENELLSL------GIRN   70 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTTC--SEEEECCTTCHHHHHTT------TGGG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHhC--CEEEEeCCCCHHHHHhc------CCCC
Confidence            45678999998 9999999999999999999999987654432    2222  24567899887655433      1247


Q ss_pred             CCEEEEcCCC
Q 025273           90 IDVVVSNAAA   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      .|++|++++.
T Consensus        71 ~d~vi~~~~~   80 (144)
T 2hmt_A           71 FEYVIVAIGA   80 (144)
T ss_dssp             CSEEEECCCS
T ss_pred             CCEEEECCCC
Confidence            8999999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.53  E-value=2.7e-07  Score=77.59  Aligned_cols=102  Identities=16%  Similarity=0.242  Sum_probs=73.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      .|++|||+|++|++|..+++.+...|++|+++++++++++.+. ++   +...   .+|.++.+-.    +.+.+..  +
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~---~~d~~~~~~~----~~~~~~~~~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADE---TVNYTHPDWP----KEVRRLTGGK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTSTTHH----HHHHHHTTTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE---EEcCCcccHH----HHHHHHhCCC
Confidence            5789999999999999999999999999999999987766553 23   3332   2477664322    2232322  3


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      .+|++|+++| ..                          ..+.+++.++++|+++.+++..+
T Consensus       235 ~~d~vi~~~g-~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  269 (343)
T 2eih_A          235 GADKVVDHTG-AL--------------------------YFEGVIKATANGGRIAIAGASSG  269 (343)
T ss_dssp             CEEEEEESSC-SS--------------------------SHHHHHHHEEEEEEEEESSCCCS
T ss_pred             CceEEEECCC-HH--------------------------HHHHHHHhhccCCEEEEEecCCC
Confidence            6999999998 22                          12345567778889999987654

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.52  E-value=7.6e-07  Score=77.53  Aligned_cols=110  Identities=16%  Similarity=0.200  Sum_probs=77.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEE--ecCC---------CHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV--CHVS---------NGQQRKN   78 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~Dv~---------~~~~v~~   78 (255)
                      ..|++|||+||+|+||..+++.+...|++|++++++.++++.++ +   .+....+-.  .|+.         +.++++.
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~---lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~  294 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-A---LGCDLVINRAELGITDDIADDPRRVVETGRK  294 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-h---cCCCEEEecccccccccccccccccchhhhH
Confidence            35899999999999999999999999999999999877666442 2   233322211  1221         1245556


Q ss_pred             HHHHHHHHhC-CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           79 LINQTIEKFG-KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        79 ~~~~~~~~~g-~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      +.+++.+..+ .+|++|+++|..                           ..+..++.++++|+++.+++..+
T Consensus       295 ~~~~v~~~~g~g~Dvvid~~G~~---------------------------~~~~~~~~l~~~G~iv~~G~~~~  340 (447)
T 4a0s_A          295 LAKLVVEKAGREPDIVFEHTGRV---------------------------TFGLSVIVARRGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHHSSCCSEEEECSCHH---------------------------HHHHHHHHSCTTCEEEESCCTTC
T ss_pred             HHHHHHHHhCCCceEEEECCCch---------------------------HHHHHHHHHhcCCEEEEEecCCC
Confidence            6677766554 699999998830                           11445567788999999987654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.47  E-value=3.6e-07  Score=76.19  Aligned_cols=102  Identities=18%  Similarity=0.190  Sum_probs=73.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      .|++|||+||+|++|..+++.+...|++|+++++++++++.++ ++   +...   ..|.++.+-.+.    +.+..  .
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~---~~~~~~~~~~~~----~~~~~~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAWE---TIDYSHEDVAKR----VLELTDGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHHH----HHHHTTTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEeCCCccHHHH----HHHHhCCC
Confidence            4899999999999999999999999999999999988766543 33   3332   235555433333    33322  2


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      .+|++|+++|..                           ..+..++.++++|+++.++...+
T Consensus       209 g~Dvvid~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~~~~  243 (325)
T 3jyn_A          209 KCPVVYDGVGQD---------------------------TWLTSLDSVAPRGLVVSFGNASG  243 (325)
T ss_dssp             CEEEEEESSCGG---------------------------GHHHHHTTEEEEEEEEECCCTTC
T ss_pred             CceEEEECCChH---------------------------HHHHHHHHhcCCCEEEEEecCCC
Confidence            699999999841                           22344677888899999987654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.47  E-value=3.5e-07  Score=76.57  Aligned_cols=102  Identities=16%  Similarity=0.281  Sum_probs=72.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      .|++|||+||+|++|..+++.+...|++|+++++++++++.. ++   .+....   .|.++.+-.+    .+.+..  .
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~ga~~~---~~~~~~~~~~----~~~~~~~~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KE---YGAEYL---INASKEDILR----QVLKFTNGK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSEE---EETTTSCHHH----HHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH---cCCcEE---EeCCCchHHH----HHHHHhCCC
Confidence            589999999999999999999999999999999998776633 22   233322   3555433333    333322  2


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      .+|++++++|. .                          ..+.+++.++++|+++.++...+
T Consensus       217 g~D~vid~~g~-~--------------------------~~~~~~~~l~~~G~iv~~G~~~~  251 (334)
T 3qwb_A          217 GVDASFDSVGK-D--------------------------TFEISLAALKRKGVFVSFGNASG  251 (334)
T ss_dssp             CEEEEEECCGG-G--------------------------GHHHHHHHEEEEEEEEECCCTTC
T ss_pred             CceEEEECCCh-H--------------------------HHHHHHHHhccCCEEEEEcCCCC
Confidence            69999999984 1                          12345567788899999986543

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.47  E-value=5.2e-07  Score=76.13  Aligned_cols=103  Identities=16%  Similarity=0.219  Sum_probs=73.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+||+|+||.++++.+...|++|+++++++++++.+++ +   +....   .|.++.+-.+.+.+ ..  .+.+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~~---~~~~~~~~~~~~~~-~~--~~g~  236 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L---GAKRG---INYRSEDFAAVIKA-ET--GQGV  236 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHHHH-HH--SSCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEE---EeCCchHHHHHHHH-Hh--CCCc
Confidence            57999999999999999999999999999999999887665433 3   33322   35555443333322 22  3479


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      |++|+++|..                           ..+..++.++++|+++.++...+
T Consensus       237 Dvvid~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~~~~  269 (353)
T 4dup_A          237 DIILDMIGAA---------------------------YFERNIASLAKDGCLSIIAFLGG  269 (353)
T ss_dssp             EEEEESCCGG---------------------------GHHHHHHTEEEEEEEEECCCTTC
T ss_pred             eEEEECCCHH---------------------------HHHHHHHHhccCCEEEEEEecCC
Confidence            9999999841                           12334567788899999886543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.45  E-value=9.6e-07  Score=74.73  Aligned_cols=106  Identities=13%  Similarity=0.111  Sum_probs=72.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++++|+|+|+ |++|+++++.+...|++|++++|+.++++.+.+....   .+.   ++..+.+++.+.+.       .
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~---~~~~~~~~~~~~~~-------~  230 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAVA-------E  230 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHHH-------T
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeE---eeeCCHHHHHHHHc-------C
Confidence            67799999999 9999999999999999999999998887776554422   111   12233444433322       6


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      .|++|++++......+                    ..+.+..++.|++++.++.+++..
T Consensus       231 ~DvVI~~~~~~~~~~~--------------------~li~~~~~~~~~~g~~ivdv~~~~  270 (361)
T 1pjc_A          231 ADLLIGAVLVPGRRAP--------------------ILVPASLVEQMRTGSVIVDVAVDQ  270 (361)
T ss_dssp             CSEEEECCCCTTSSCC--------------------CCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             CCEEEECCCcCCCCCC--------------------eecCHHHHhhCCCCCEEEEEecCC
Confidence            8999999986331111                    011233456778888999988754

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.44  E-value=7.2e-07  Score=75.65  Aligned_cols=99  Identities=15%  Similarity=0.200  Sum_probs=69.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc---hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ---KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++|++|||+|+ |++|..+++.+...|++|++++++.   ++.+.+ +++   +..  .+  | .+  ++.+.+.+ .  
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~---ga~--~v--~-~~--~~~~~~~~-~--  243 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET---KTN--YY--N-SS--NGYDKLKD-S--  243 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH---TCE--EE--E-CT--TCSHHHHH-H--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh---CCc--ee--c-hH--HHHHHHHH-h--
Confidence            34999999999 9999999999999999999999987   665433 233   322  22  5 44  22222222 1  


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHH-HHHhhcccCCCeEEEEcccC
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL-QDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~-~~~~~~~~~~~~iv~iss~~  149 (255)
                      .+.+|++|+++|...                          .+ +.+++.++++|++++++...
T Consensus       244 ~~~~d~vid~~g~~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  281 (366)
T 2cdc_A          244 VGKFDVIIDATGADV--------------------------NILGNVIPLLGRNGVLGLFGFST  281 (366)
T ss_dssp             HCCEEEEEECCCCCT--------------------------HHHHHHGGGEEEEEEEEECSCCC
T ss_pred             CCCCCEEEECCCChH--------------------------HHHHHHHHHHhcCCEEEEEecCC
Confidence            157999999998521                          22 55678888889999998654

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.44  E-value=2.4e-06  Score=72.75  Aligned_cols=107  Identities=14%  Similarity=0.162  Sum_probs=75.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++++|+|+|+ |+||+.+++.+...|++|++++|+.++++.+.+.+   +..+   .++.++.+++++++.       
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~---~~~~~~~~~l~~~l~-------  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRI---HTRYSSAYELEGAVK-------  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSS---EEEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCee---EeccCCHHHHHHHHc-------
Confidence            478999999998 99999999999999999999999988766654433   2222   234445555555443       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      ..|++|++++.... .. .                  ..+.+..++.|++++.||++++..
T Consensus       231 ~aDvVi~~~~~p~~-~t-~------------------~li~~~~l~~mk~g~~iV~va~~~  271 (377)
T 2vhw_A          231 RADLVIGAVLVPGA-KA-P------------------KLVSNSLVAHMKPGAVLVDIAIDQ  271 (377)
T ss_dssp             HCSEEEECCCCTTS-CC-C------------------CCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred             CCCEEEECCCcCCC-CC-c------------------ceecHHHHhcCCCCcEEEEEecCC
Confidence            58999999875331 10 0                  112344567888889999998643

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.43  E-value=9.9e-07  Score=71.99  Aligned_cols=81  Identities=14%  Similarity=0.099  Sum_probs=60.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++.+.+++......+.+...+..+   +.+.++      
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~------  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA------  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh------
Confidence            578999999998 7999999999999998 69999999999988888876542222222334322   333332      


Q ss_pred             CCCCEEEEcCCCC
Q 025273           88 GKIDVVVSNAAAN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                       ..|++||+....
T Consensus       194 -~~DiVInaTp~G  205 (283)
T 3jyo_A          194 -AADGVVNATPMG  205 (283)
T ss_dssp             -HSSEEEECSSTT
T ss_pred             -cCCEEEECCCCC
Confidence             579999998653

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.42  E-value=4.6e-07  Score=76.45  Aligned_cols=99  Identities=15%  Similarity=0.260  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      .|++|||+||+|++|.++++.+...|++|++++|++++++.. ++   .+...   .+|.++.+..+++    .+..  +
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~ga~~---~~d~~~~~~~~~~----~~~~~~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQ---NGAHE---VFNHREVNYIDKI----KKYVGEK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSE---EEETTSTTHHHHH----HHHHCTT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HH---cCCCE---EEeCCCchHHHHH----HHHcCCC
Confidence            479999999999999999999999999999999998776633 22   23332   3577665433333    3323  2


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .+|++|+|+|..                           ..+..+..++++|+++.++.
T Consensus       239 ~~D~vi~~~G~~---------------------------~~~~~~~~l~~~G~iv~~g~  270 (351)
T 1yb5_A          239 GIDIIIEMLANV---------------------------NLSKDLSLLSHGGRVIVVGS  270 (351)
T ss_dssp             CEEEEEESCHHH---------------------------HHHHHHHHEEEEEEEEECCC
T ss_pred             CcEEEEECCChH---------------------------HHHHHHHhccCCCEEEEEec
Confidence            699999998820                           01223566778889998875

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.40  E-value=9.2e-07  Score=74.19  Aligned_cols=102  Identities=18%  Similarity=0.226  Sum_probs=71.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      .|++|||+|++|++|..+++.+...|++|++++++.++++.+++ +   +....   .|.++.+-.+    .+.+..  .
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~~~---~~~~~~~~~~----~~~~~~~~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAAYV---IDTSTAPLYE----TVMELTNGI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EETTTSCHHH----HHHHHTTTS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCcEE---EeCCcccHHH----HHHHHhCCC
Confidence            58999999999999999999999999999999999888765543 3   33322   3555443322    233322  2


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      .+|++|+++|...                           ....++.++++|+++.++...+
T Consensus       213 g~Dvvid~~g~~~---------------------------~~~~~~~l~~~G~iv~~G~~~~  247 (340)
T 3gms_A          213 GADAAIDSIGGPD---------------------------GNELAFSLRPNGHFLTIGLLSG  247 (340)
T ss_dssp             CEEEEEESSCHHH---------------------------HHHHHHTEEEEEEEEECCCTTS
T ss_pred             CCcEEEECCCChh---------------------------HHHHHHHhcCCCEEEEEeecCC
Confidence            6999999998410                           0112366788899999986543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.39  E-value=4e-06  Score=70.51  Aligned_cols=103  Identities=12%  Similarity=0.142  Sum_probs=71.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ++++||+||+|++|..+++.+...|++|++++++.++++.++ ++   +....   .|..+.+-.+.+ .+.... ..+|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~~v-~~~~~~-~g~D  235 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAAHV---LNEKAPDFEATL-REVMKA-EQPR  235 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCSEE---EETTSTTHHHHH-HHHHHH-HCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EECCcHHHHHHH-HHHhcC-CCCc
Confidence            389999999999999999999999999999999988876553 33   33322   355543332322 222111 2799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      ++++++|..                           ..+.+++.++++|+++.+++..+
T Consensus       236 ~vid~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~~  267 (349)
T 3pi7_A          236 IFLDAVTGP---------------------------LASAIFNAMPKRARWIIYGRLDP  267 (349)
T ss_dssp             EEEESSCHH---------------------------HHHHHHHHSCTTCEEEECCCSCC
T ss_pred             EEEECCCCh---------------------------hHHHHHhhhcCCCEEEEEeccCC
Confidence            999998831                           01334567788999999986544

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.35  E-value=3.8e-06  Score=69.36  Aligned_cols=83  Identities=13%  Similarity=0.246  Sum_probs=61.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCC---chhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK---QKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      .++++|++||+|+ ||.|++++..|++.|+ +|+++.|+   .++++.+.+++... +..+.  ..+..+.+...+.+. 
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~--~~~~~~l~~~~~~l~-  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVT--VTDLADQHAFTEALA-  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHHH-
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceE--EechHhhhhhHhhcc-
Confidence            3578999999997 8999999999999998 69999999   77788877777654 33333  345555433233222 


Q ss_pred             HHHHhCCCCEEEEcCCCC
Q 025273           83 TIEKFGKIDVVVSNAAAN  100 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~  100 (255)
                            ..|+|||+....
T Consensus       220 ------~~DiIINaTp~G  231 (312)
T 3t4e_A          220 ------SADILTNGTKVG  231 (312)
T ss_dssp             ------HCSEEEECSSTT
T ss_pred             ------CceEEEECCcCC
Confidence                  579999997654

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.34  E-value=1.3e-05  Score=66.87  Aligned_cols=114  Identities=18%  Similarity=0.182  Sum_probs=73.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhcCC--eEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARGI--EVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++|+||||+|.+|..++..|+.+|  ..|++++++++  +....++.....  ++..    ++...+.++.+       
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al-------   74 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL-------   74 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH-------
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc-------
Confidence            3579999999999999999999998  77999998876  333333433211  2222    12233333333       


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ...|++|+++|.....    ..+.   ...+..|+.....+.+.+.+.- ..+.|+++|
T Consensus        75 ~gaDvVi~~ag~~~~~----g~~r---~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S  125 (326)
T 1smk_A           75 TGMDLIIVPAGVPRKP----GMTR---DDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS  125 (326)
T ss_dssp             TTCSEEEECCCCCCCS----SCCC---SHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             CCCCEEEEcCCcCCCC----CCCH---HHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence            3789999999965421    1222   2347889988888888887654 334555544

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.31  E-value=2.1e-06  Score=74.90  Aligned_cols=109  Identities=17%  Similarity=0.208  Sum_probs=78.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEE--ec--------CCCHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV--CH--------VSNGQQRKNLI   80 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~D--------v~~~~~v~~~~   80 (255)
                      .|++|||+||+|++|...++.+...|++|+++++++++++.+ +++   +....+-.  .|        ..+.++++++.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~  303 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRFG  303 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHHHH
Confidence            588999999999999999999999999999999887776644 333   33322211  11        23556777777


Q ss_pred             HHHHHHhC--CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           81 NQTIEKFG--KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        81 ~~~~~~~g--~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      +.+.+..+  .+|++|.++|. .                          ..+..+..++++|+++.+++..+
T Consensus       304 ~~i~~~t~g~g~Dvvid~~G~-~--------------------------~~~~~~~~l~~~G~iv~~G~~~~  348 (456)
T 3krt_A          304 KRIRELTGGEDIDIVFEHPGR-E--------------------------TFGASVFVTRKGGTITTCASTSG  348 (456)
T ss_dssp             HHHHHHHTSCCEEEEEECSCH-H--------------------------HHHHHHHHEEEEEEEEESCCTTC
T ss_pred             HHHHHHhCCCCCcEEEEcCCc-h--------------------------hHHHHHHHhhCCcEEEEEecCCC
Confidence            78777653  79999999883 1                          12344567788899999886543

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.31  E-value=2.3e-06  Score=71.72  Aligned_cols=101  Identities=18%  Similarity=0.301  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+|+ |++|..+++.+...|++|+++++++++++.++ +   .+...   .+|.++.+ +.+.+.++   .+.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~---~~d~~~~~-~~~~~~~~---~~~~  231 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E---LGADL---VVNPLKED-AAKFMKEK---VGGV  231 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-H---TTCSE---EECTTTSC-HHHHHHHH---HSSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---CCCCE---EecCCCcc-HHHHHHHH---hCCC
Confidence            5789999999 88999999999999999999999987766543 2   23332   24766543 22222222   2579


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |++|+++|...                          ..+..++.++++|+++.+++..
T Consensus       232 d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  264 (339)
T 1rjw_A          232 HAAVVTAVSKP--------------------------AFQSAYNSIRRGGACVLVGLPP  264 (339)
T ss_dssp             EEEEESSCCHH--------------------------HHHHHHHHEEEEEEEEECCCCS
T ss_pred             CEEEECCCCHH--------------------------HHHHHHHHhhcCCEEEEecccC
Confidence            99999988410                          2344567778889999988654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.30  E-value=2.6e-06  Score=71.50  Aligned_cols=100  Identities=18%  Similarity=0.287  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C-
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G-   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g-   88 (255)
                      .|++|||+||+|+||..+++.+...|++|++++++.++.+.+++ +   +....   .|..  ++   +.+.+.+.. + 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---ga~~v---~~~~--~~---~~~~v~~~~~~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V---GADIV---LPLE--EG---WAKAVREATGGA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCSEE---EESS--TT---HHHHHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcEE---ecCc--hh---HHHHHHHHhCCC
Confidence            58999999999999999999999999999999999888765433 3   33322   2443  22   233333333 2 


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      .+|++|+++|...                           .+.+++.++++|+++.++...
T Consensus       227 g~Dvvid~~g~~~---------------------------~~~~~~~l~~~G~iv~~G~~~  260 (342)
T 4eye_A          227 GVDMVVDPIGGPA---------------------------FDDAVRTLASEGRLLVVGFAA  260 (342)
T ss_dssp             CEEEEEESCC--C---------------------------HHHHHHTEEEEEEEEEC----
T ss_pred             CceEEEECCchhH---------------------------HHHHHHhhcCCCEEEEEEccC
Confidence            6999999998410                           123456778889999987654

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.29  E-value=2.4e-06  Score=72.34  Aligned_cols=103  Identities=17%  Similarity=0.191  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+||+|++|..+++.+...|++|+++++++++++.+++    .+....   .|..+.+ +.+.+.+..  .+.+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~~~---~~~~~~~-~~~~~~~~~--~~g~  232 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCDRP---INYKTEP-VGTVLKQEY--PEGV  232 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEE---EETTTSC-HHHHHHHHC--TTCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCcEE---EecCChh-HHHHHHHhc--CCCC
Confidence            57899999999999999999999999999999999776654432    333322   3554432 222222221  1369


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      |++|+++|.            +               ..+.+++.++++|+++.+++..+
T Consensus       233 D~vid~~g~------------~---------------~~~~~~~~l~~~G~iv~~g~~~~  265 (362)
T 2c0c_A          233 DVVYESVGG------------A---------------MFDLAVDALATKGRLIVIGFISG  265 (362)
T ss_dssp             EEEEECSCT------------H---------------HHHHHHHHEEEEEEEEECCCGGG
T ss_pred             CEEEECCCH------------H---------------HHHHHHHHHhcCCEEEEEeCCCC
Confidence            999999882            0               12345667778899999987654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=98.25  E-value=2.1e-06  Score=72.79  Aligned_cols=99  Identities=18%  Similarity=0.212  Sum_probs=70.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+|+ |++|..+++.+...|++|+++++++++.+...+++   +...   ..|..+.+.+++       ..+.+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~---v~~~~~~~~~~~-------~~~~~  252 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GADS---FLVSRDQEQMQA-------AAGTL  252 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CCSE---EEETTCHHHHHH-------TTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CCce---EEeccCHHHHHH-------hhCCC
Confidence            6899999996 99999999999999999999999988766544332   3332   246666543322       22579


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |++|+++|...                          .++..++.++++|+++++++..
T Consensus       253 D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~g~~~  285 (366)
T 1yqd_A          253 DGIIDTVSAVH--------------------------PLLPLFGLLKSHGKLILVGAPE  285 (366)
T ss_dssp             EEEEECCSSCC--------------------------CSHHHHHHEEEEEEEEECCCCS
T ss_pred             CEEEECCCcHH--------------------------HHHHHHHHHhcCCEEEEEccCC
Confidence            99999998532                          1123456677889999998754

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.24  E-value=4.2e-06  Score=60.40  Aligned_cols=75  Identities=12%  Similarity=0.228  Sum_probs=55.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +++++|+|+ |.+|+.+++.|.+.|++|++++|+++..+.+.+.   .  .+.++..|.++.+.+.+.      ...+.|
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~--~~~~~~~d~~~~~~l~~~------~~~~~d   71 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I--DALVINGDCTKIKTLEDA------GIEDAD   71 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C--SSEEEESCTTSHHHHHHT------TTTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c--CcEEEEcCCCCHHHHHHc------CcccCC
Confidence            467999987 9999999999999999999999997765544322   1  234567788877664321      124789


Q ss_pred             EEEEcCC
Q 025273           92 VVVSNAA   98 (255)
Q Consensus        92 ~lv~~ag   98 (255)
                      ++|++.+
T Consensus        72 ~vi~~~~   78 (140)
T 1lss_A           72 MYIAVTG   78 (140)
T ss_dssp             EEEECCS
T ss_pred             EEEEeeC
Confidence            9999864

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.22  E-value=3.2e-05  Score=64.04  Aligned_cols=146  Identities=14%  Similarity=0.101  Sum_probs=91.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEeC--CchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSR--KQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r--~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +|+||||+|++|++++..|+..|.  .++++++  +.+.++....++...    +..+.+...|    +++.+.      
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~a------   71 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRI------   71 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGG------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHH------
Confidence            699999999999999999998884  5888998  655444433333221    1122222211    111112      


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc--------cCCCCCC
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--------YQPQSSM  157 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~--------~~~~~~~  157 (255)
                       +...|++||.||.....    ..+.   ...+..|+.....+.+.+..+-  .+.++++|....        ..+.++.
T Consensus        72 -l~gaD~Vi~~Ag~~~~~----g~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv~~~t~~~~k~~~~p~~  141 (313)
T 1hye_A           72 -IDESDVVIITSGVPRKE----GMSR---MDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPVDVMTYKALVDSKFERN  141 (313)
T ss_dssp             -GTTCSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSHHHHHHHHHHHHCCCTT
T ss_pred             -hCCCCEEEECCCCCCCC----CCcH---HHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcHHHHHHHHHHhhCcChh
Confidence             33799999999975321    2232   3458899999999999888765  445555554322        1234555


Q ss_pred             hhhHh-hHHHHHHHHHHHHHHhC
Q 025273          158 AMYGV-TKTALLGLTKALAAEMA  179 (255)
Q Consensus       158 ~~y~~-sK~a~~~l~~~la~e~~  179 (255)
                      ..++. +..-...+.+.++..++
T Consensus       142 rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          142 QVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             SEEECTTHHHHHHHHHHHHHHHT
T ss_pred             cEEEeCccHHHHHHHHHHHHHhC
Confidence            66777 55556677777777764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.21  E-value=5.7e-06  Score=67.16  Aligned_cols=77  Identities=13%  Similarity=0.187  Sum_probs=57.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++.+.+++...+ .+..  +|+   +++.       +  +
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~~-------~--~  179 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DSIP-------L--Q  179 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GGCC-------C--S
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HHhc-------c--C
Confidence            468999999998 799999999999999999999999998888887775422 2222  333   1110       0  3


Q ss_pred             CCCEEEEcCCCCC
Q 025273           89 KIDVVVSNAAANP  101 (255)
Q Consensus        89 ~~d~lv~~ag~~~  101 (255)
                      ..|++||+++...
T Consensus       180 ~~DivIn~t~~~~  192 (272)
T 1p77_A          180 TYDLVINATSAGL  192 (272)
T ss_dssp             CCSEEEECCCC--
T ss_pred             CCCEEEECCCCCC
Confidence            7999999998643

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=98.19  E-value=4.4e-06  Score=70.24  Aligned_cols=99  Identities=14%  Similarity=0.263  Sum_probs=69.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-CC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-GK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   89 (255)
                      .|++|||+||+|++|..+++.+...|++|++++++.++++.+++ +   +....   .|..+  +   +.+.+.+.. +.
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v---i~~~~--~---~~~~~~~~~~~g  217 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M---GADIV---LNHKE--S---LLNQFKTQGIEL  217 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H---TCSEE---ECTTS--C---HHHHHHHHTCCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcEE---EECCc--c---HHHHHHHhCCCC
Confidence            58999999999999999999999999999999998877665443 3   33322   24432  2   223333333 36


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      +|++++++|..                          ...+.+++.++++|++|.+++
T Consensus       218 ~Dvv~d~~g~~--------------------------~~~~~~~~~l~~~G~iv~~~~  249 (346)
T 3fbg_A          218 VDYVFCTFNTD--------------------------MYYDDMIQLVKPRGHIATIVA  249 (346)
T ss_dssp             EEEEEESSCHH--------------------------HHHHHHHHHEEEEEEEEESSC
T ss_pred             ccEEEECCCch--------------------------HHHHHHHHHhccCCEEEEECC
Confidence            99999998831                          123445667788899988764

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=98.19  E-value=3.1e-06  Score=69.70  Aligned_cols=98  Identities=16%  Similarity=0.272  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+|++|++|..+++.+...|++|+++++++++++.++ +   .+....   .|..+.++   +.+.+    +.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~ga~~~---~~~~~~~~---~~~~~----~~~  190 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A---LGAEEA---ATYAEVPE---RAKAW----GGL  190 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H---TTCSEE---EEGGGHHH---HHHHT----TSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h---cCCCEE---EECCcchh---HHHHh----cCc
Confidence            4899999999999999999999999999999999988766543 2   233322   35543122   22222    479


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      |++|+ +|. .                          ..+..++.++++|+++.++...+
T Consensus       191 d~vid-~g~-~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  222 (302)
T 1iz0_A          191 DLVLE-VRG-K--------------------------EVEESLGLLAHGGRLVYIGAAEG  222 (302)
T ss_dssp             EEEEE-CSC-T--------------------------THHHHHTTEEEEEEEEEC-----
T ss_pred             eEEEE-CCH-H--------------------------HHHHHHHhhccCCEEEEEeCCCC
Confidence            99999 874 1                          02445677788889999876543

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.16  E-value=4.3e-05  Score=62.97  Aligned_cols=145  Identities=13%  Similarity=0.039  Sum_probs=88.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeC--CchhHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSR--KQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r--~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ++++||||+|.+|.+++..|+..|.  .++++++  +.+.++....++...   ...+.+.. |  +.+.          
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a----------   67 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED----------   67 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG----------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH----------
Confidence            3699999999999999999998875  5899999  766555444444332   12222222 2  1221          


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc--------cCCCCCC
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--------YQPQSSM  157 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~--------~~~~~~~  157 (255)
                       +...|++||.||.....    ..+..   ..+..|+.....+.+.+..+ ...+.++++|....        ..+.+..
T Consensus        68 -~~~aDvVi~~ag~~~~~----g~~r~---dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SNPv~~~~~~~~~~~~~p~~  138 (303)
T 1o6z_A           68 -TAGSDVVVITAGIPRQP----GQTRI---DLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPVDLLNRHLYEAGDRSRE  138 (303)
T ss_dssp             -GTTCSEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSSHHHHHHHHHHHSSSCGG
T ss_pred             -hCCCCEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCChHHHHHHHHHHHcCCCHH
Confidence             33799999999975321    22332   35789999999988888765 33445555443221        1223434


Q ss_pred             hhhHh-hHHHHHHHHHHHHHHhC
Q 025273          158 AMYGV-TKTALLGLTKALAAEMA  179 (255)
Q Consensus       158 ~~y~~-sK~a~~~l~~~la~e~~  179 (255)
                      ..++. .-.-...+-+.++..++
T Consensus       139 rviG~gt~Ld~~r~~~~la~~l~  161 (303)
T 1o6z_A          139 QVIGFGGRLDSARFRYVLSEEFD  161 (303)
T ss_dssp             GEEECCHHHHHHHHHHHHHHHHT
T ss_pred             HeeecccchhHHHHHHHHHHHhC
Confidence            44555 22234555666666663

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.13  E-value=1.8e-05  Score=58.34  Aligned_cols=77  Identities=13%  Similarity=0.129  Sum_probs=57.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .++++|+|+ |.+|+.+++.|.+.|+.|++++++. +..+.+.+..   ...+.++..|.++++.++++      ...+.
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a------~i~~a   72 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKA------GIDRC   72 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHH------TTTTC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHc------ChhhC
Confidence            467889986 9999999999999999999999984 4444443322   22466788999998876554      12378


Q ss_pred             CEEEEcCC
Q 025273           91 DVVVSNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (153)
T 1id1_A           73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEecC
Confidence            99998765

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.12  E-value=4.6e-06  Score=68.61  Aligned_cols=78  Identities=15%  Similarity=0.186  Sum_probs=56.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++.+.+++......+       .+.+++       .+..
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~-------~~~~~~-------~~~~  202 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAY-------FSLAEA-------ETRL  202 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCE-------ECHHHH-------HHTG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCce-------eeHHHH-------Hhhh
Confidence            578999999998 7899999999999998 89999999988877766553211111       112222       2233


Q ss_pred             CCCCEEEEcCCCCC
Q 025273           88 GKIDVVVSNAAANP  101 (255)
Q Consensus        88 g~~d~lv~~ag~~~  101 (255)
                      ...|++||+.+...
T Consensus       203 ~~aDivIn~t~~~~  216 (297)
T 2egg_A          203 AEYDIIINTTSVGM  216 (297)
T ss_dssp             GGCSEEEECSCTTC
T ss_pred             ccCCEEEECCCCCC
Confidence            47999999998653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.12  E-value=5.8e-06  Score=70.02  Aligned_cols=72  Identities=14%  Similarity=0.151  Sum_probs=58.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      .++|+|.|| |++|+.+++.|++ .+.|.+.+|+.+.++.+.       ..+..+++|+++.+++.++++       +.|
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~~-------~~D   79 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVMK-------EFE   79 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHHh-------CCC
Confidence            457999998 9999999999865 578999999987766543       234567899999999888765       689


Q ss_pred             EEEEcCCC
Q 025273           92 VVVSNAAA   99 (255)
Q Consensus        92 ~lv~~ag~   99 (255)
                      ++|++++.
T Consensus        80 vVi~~~p~   87 (365)
T 3abi_A           80 LVIGALPG   87 (365)
T ss_dssp             EEEECCCG
T ss_pred             EEEEecCC
Confidence            99999875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=98.09  E-value=1.4e-05  Score=67.15  Aligned_cols=102  Identities=21%  Similarity=0.273  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      .|++|||+|+ |++|..+++.+...|+ +|+++++++++++.++ ++   +...   ..|..+++ +   .+++.+.. +
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~---Ga~~---~~~~~~~~-~---~~~v~~~~~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV---GADY---VINPFEED-V---VKEVMDITDG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH---TCSE---EECTTTSC-H---HHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCCE---EECCCCcC-H---HHHHHHHcCC
Confidence            6899999999 9999999999999999 8999999977665443 33   3222   23555432 2   22333322 2


Q ss_pred             -CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           89 -KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                       .+|++|+++|..                          ...+.+++.++++|+++.+++...
T Consensus       235 ~g~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~~  271 (348)
T 2d8a_A          235 NGVDVFLEFSGAP--------------------------KALEQGLQAVTPAGRVSLLGLYPG  271 (348)
T ss_dssp             SCEEEEEECSCCH--------------------------HHHHHHHHHEEEEEEEEECCCCSS
T ss_pred             CCCCEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEEccCCC
Confidence             699999998831                          123445677788899999987543

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=98.07  E-value=1.3e-05  Score=68.00  Aligned_cols=99  Identities=15%  Similarity=0.183  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+||+|++|..+++.+...|++|+++++ .++.+.+ ++   .+....   .|..+.+-.+    ++.+ .+.+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~~---lGa~~v---~~~~~~~~~~----~~~~-~~g~  249 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-RK---LGADDV---IDYKSGSVEE----QLKS-LKPF  249 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-HH---TTCSEE---EETTSSCHHH----HHHT-SCCB
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-HH---cCCCEE---EECCchHHHH----HHhh-cCCC
Confidence            5889999999999999999999999999998884 4444432 22   343322   3555433222    2222 2579


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      |++|+++|...                         ...+..++.++++|+++.+++
T Consensus       250 D~vid~~g~~~-------------------------~~~~~~~~~l~~~G~iv~~g~  281 (375)
T 2vn8_A          250 DFILDNVGGST-------------------------ETWAPDFLKKWSGATYVTLVT  281 (375)
T ss_dssp             SEEEESSCTTH-------------------------HHHGGGGBCSSSCCEEEESCC
T ss_pred             CEEEECCCChh-------------------------hhhHHHHHhhcCCcEEEEeCC
Confidence            99999998420                         112334566788999998875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=98.07  E-value=4.5e-05  Score=64.38  Aligned_cols=105  Identities=15%  Similarity=0.156  Sum_probs=73.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (255)
                      .|++|||+|+ |++|...++.+...|++ |+++++++++++.+++ + .  ..+..+..|-.+.+++.+   ++.+..  
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-~--~~~~~~~~~~~~~~~~~~---~v~~~t~g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-C--PEVVTHKVERLSAEESAK---KIVESFGG  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-C--TTCEEEECCSCCHHHHHH---HHHHHTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-c--hhcccccccccchHHHHH---HHHHHhCC
Confidence            5889999998 99999999988889998 9999999887665443 3 2  234444455444555443   444433  


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      ..+|+++.++|..                          ...+.+++.++++|+++.++...
T Consensus       251 ~g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~  286 (363)
T 3m6i_A          251 IEPAVALECTGVE--------------------------SSIAAAIWAVKFGGKVFVIGVGK  286 (363)
T ss_dssp             CCCSEEEECSCCH--------------------------HHHHHHHHHSCTTCEEEECCCCC
T ss_pred             CCCCEEEECCCCh--------------------------HHHHHHHHHhcCCCEEEEEccCC
Confidence            2699999998841                          02344566778899999987643

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.06  E-value=3.5e-06  Score=62.38  Aligned_cols=81  Identities=21%  Similarity=0.183  Sum_probs=56.4

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      |..+..+++++|.|+ |.+|+.+++.|.+.|++|++++|+++..+.+.+   ..  ...++..|.++.+.+.+.      
T Consensus        13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~--g~~~~~~d~~~~~~l~~~------   80 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF--SGFTVVGDAAEFETLKEC------   80 (155)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC--CSEEEESCTTSHHHHHTT------
T ss_pred             hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC--CCcEEEecCCCHHHHHHc------
Confidence            334567899999996 999999999999999999999999876543221   11  233566788776544321      


Q ss_pred             HhCCCCEEEEcCC
Q 025273           86 KFGKIDVVVSNAA   98 (255)
Q Consensus        86 ~~g~~d~lv~~ag   98 (255)
                      .....|++|.+.+
T Consensus        81 ~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 GMEKADMVFAFTN   93 (155)
T ss_dssp             TGGGCSEEEECSS
T ss_pred             CcccCCEEEEEeC
Confidence            1236899998876

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=98.05  E-value=1.1e-05  Score=67.70  Aligned_cols=100  Identities=14%  Similarity=0.219  Sum_probs=67.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+||+|++|..+++.+...|++|+++ ++.++++.+ +++   +...    +| .+.+ +.+.+.+... ...+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---Ga~~----i~-~~~~-~~~~~~~~~~-~~g~  217 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---GATP----ID-ASRE-PEDYAAEHTA-GQGF  217 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---TSEE----EE-TTSC-HHHHHHHHHT-TSCE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---CCCE----ec-cCCC-HHHHHHHHhc-CCCc
Confidence            58999999999999999999999999999998 776665433 233   4333    34 3322 2222222211 1269


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |++++++|. .                          ..+..++.++++|+++.++...
T Consensus       218 D~vid~~g~-~--------------------------~~~~~~~~l~~~G~iv~~g~~~  249 (343)
T 3gaz_A          218 DLVYDTLGG-P--------------------------VLDASFSAVKRFGHVVSCLGWG  249 (343)
T ss_dssp             EEEEESSCT-H--------------------------HHHHHHHHEEEEEEEEESCCCS
T ss_pred             eEEEECCCc-H--------------------------HHHHHHHHHhcCCeEEEEcccC
Confidence            999999883 0                          1334556778889999887543

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=98.03  E-value=9.8e-06  Score=66.59  Aligned_cols=93  Identities=16%  Similarity=0.132  Sum_probs=62.9

Q ss_pred             cCCCCE-EEEEcCCC-----------------c-hHHHHHHHHHHcCCeEEEEeCCchhH--------HHHHHHHHh---
Q 025273            9 RFQGKV-AIVTASTQ-----------------G-IGFGIAERLGLEGASVVVSSRKQKNV--------DEAVVKLKA---   58 (255)
Q Consensus         9 ~l~~k~-vlItGa~~-----------------g-iG~~~a~~l~~~G~~V~~~~r~~~~~--------~~~~~~~~~---   58 (255)
                      +++||+ ||||+|..                 | .|.++|++++++|+.|+++.+...-.        ....+.+..   
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            467888 99998765                 5 99999999999999999998753310        000111100   


Q ss_pred             cCCeEEEEEecCCCHHHHHHHHHHHH------------------------------HHhCCCCEEEEcCCCCC
Q 025273           59 RGIEVIGVVCHVSNGQQRKNLINQTI------------------------------EKFGKIDVVVSNAAANP  101 (255)
Q Consensus        59 ~~~~~~~~~~Dv~~~~~v~~~~~~~~------------------------------~~~g~~d~lv~~ag~~~  101 (255)
                      .+..+..+..|+.+.+++.+.+.+..                              +.+++.|++|.+|++.+
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence            12234456777777777666665432                              33578999999999876

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=98.01  E-value=3.1e-05  Score=63.03  Aligned_cols=75  Identities=21%  Similarity=0.305  Sum_probs=57.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++.+.+++...+ .+.....+     ++.          
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~-----~l~----------  185 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE-----QLK----------  185 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG-----GCC----------
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH-----Hhc----------
Confidence            578999999998 7999999999999996 89999999999888888876433 33333221     110          


Q ss_pred             CCCCEEEEcCCCC
Q 025273           88 GKIDVVVSNAAAN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      ...|++||+....
T Consensus       186 ~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 QSYDVIINSTSAS  198 (281)
T ss_dssp             SCEEEEEECSCCC
T ss_pred             CCCCEEEEcCcCC
Confidence            2689999987653

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=98.01  E-value=3.2e-05  Score=61.85  Aligned_cols=80  Identities=16%  Similarity=0.238  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCc-------------------hhHHHHHHHHHhc--CCeEEEEE
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ-------------------KNVDEAVVKLKAR--GIEVIGVV   67 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~~   67 (255)
                      +++++|+|.|+ ||+|.++++.|++.|. +|+++|++.                   .+.+.+++.+...  ..++..+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            66889999996 7999999999999997 699999987                   7777777777664  34566666


Q ss_pred             ecCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           68 CHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        68 ~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      .+++ .+.++++++       ..|++|.+..
T Consensus       108 ~~~~-~~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          108 ALLD-DAELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             SCCC-HHHHHHHHH-------TSSEEEECCS
T ss_pred             ccCC-HhHHHHHHh-------CCCEEEEeCC
Confidence            6665 344444433       7899998854

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=98.00  E-value=1.6e-05  Score=64.38  Aligned_cols=74  Identities=14%  Similarity=0.147  Sum_probs=56.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++.+.+++..  ..+...  +..+   +..         
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~--~~~~---l~~---------  179 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRIS--RYEA---LEG---------  179 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEE--CSGG---GTT---------
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEe--eHHH---hcc---------
Confidence            578999999998 6999999999999996 899999999988888877753  233332  2211   110         


Q ss_pred             CCCCEEEEcCCC
Q 025273           88 GKIDVVVSNAAA   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                      ...|++||+...
T Consensus       180 ~~~DivInaTp~  191 (272)
T 3pwz_A          180 QSFDIVVNATSA  191 (272)
T ss_dssp             CCCSEEEECSSG
T ss_pred             cCCCEEEECCCC
Confidence            378999998764

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.97  E-value=1.2e-05  Score=67.47  Aligned_cols=100  Identities=15%  Similarity=0.191  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|++|||+|+ |++|..+++.+...|+ +|+++++++++++.+++ + .   .   ...|..++ ++.+.+.++.  .+.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a---~---~v~~~~~~-~~~~~~~~~~--~~g  231 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A---D---RLVNPLEE-DLLEVVRRVT--GSG  231 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C---S---EEECTTTS-CHHHHHHHHH--SSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H---H---hccCcCcc-CHHHHHHHhc--CCC
Confidence            6899999999 9999999999888999 89999998776554322 1 1   1   12355542 2333333332  236


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      +|++|.++|..                          ...+..++.++++|+++.++..
T Consensus       232 ~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~  264 (343)
T 2dq4_A          232 VEVLLEFSGNE--------------------------AAIHQGLMALIPGGEARILGIP  264 (343)
T ss_dssp             EEEEEECSCCH--------------------------HHHHHHHHHEEEEEEEEECCCC
T ss_pred             CCEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEEecC
Confidence            99999998840                          1234456677888899998764

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.96  E-value=2.6e-05  Score=65.94  Aligned_cols=103  Identities=17%  Similarity=0.202  Sum_probs=69.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+| +|++|...++.+...|++|+++++++++++.+ +++   +....   .| .+.+++.+.+.++.. ...+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~-~~~~~~~~~v~~~~~-g~g~  258 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---GADHG---IN-RLEEDWVERVYALTG-DRGA  258 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSEE---EE-TTTSCHHHHHHHHHT-TCCE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---CCCEE---Ec-CCcccHHHHHHHHhC-CCCc
Confidence            578999999 89999999999999999999999998776653 333   33322   35 433333333322211 1269


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      |+++.++|. .                          ..+..++.++++|+++.++...+
T Consensus       259 D~vid~~g~-~--------------------------~~~~~~~~l~~~G~iv~~G~~~~  291 (363)
T 3uog_A          259 DHILEIAGG-A--------------------------GLGQSLKAVAPDGRISVIGVLEG  291 (363)
T ss_dssp             EEEEEETTS-S--------------------------CHHHHHHHEEEEEEEEEECCCSS
T ss_pred             eEEEECCCh-H--------------------------HHHHHHHHhhcCCEEEEEecCCC
Confidence            999999982 1                          12334567788899999986554

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.96  E-value=2.1e-05  Score=65.86  Aligned_cols=101  Identities=15%  Similarity=0.210  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+|+ |++|...++.+...|++|+++++++++++.++ +   .+....   .|-.+.+-.+    .+.+..+.+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~~---i~~~~~~~~~----~~~~~~g~~  233 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-R---LGAEVA---VNARDTDPAA----WLQKEIGGA  233 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-H---TTCSEE---EETTTSCHHH----HHHHHHSSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-H---cCCCEE---EeCCCcCHHH----HHHHhCCCC
Confidence            5899999997 89999999999899999999999987766432 2   343332   3555433322    333344689


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |.++.++|..           +               ..+.+++.++++|+++.++...
T Consensus       234 d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~iv~~G~~~  266 (340)
T 3s2e_A          234 HGVLVTAVSP-----------K---------------AFSQAIGMVRRGGTIALNGLPP  266 (340)
T ss_dssp             EEEEESSCCH-----------H---------------HHHHHHHHEEEEEEEEECSCCS
T ss_pred             CEEEEeCCCH-----------H---------------HHHHHHHHhccCCEEEEeCCCC
Confidence            9999998731           1               2344566778889999887544

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.94  E-value=4e-05  Score=64.97  Aligned_cols=103  Identities=14%  Similarity=0.206  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   88 (255)
                      .|++|||+|+ |++|...++.+...|+ +|+++++++++++.++ +   .+....   .|.++ .+++.+.+.++..  +
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~~~~~~~~~~--~  261 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V---FGATDF---VNPNDHSEPISQVLSKMTN--G  261 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCCEE---ECGGGCSSCHHHHHHHHHT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---hCCceE---EeccccchhHHHHHHHHhC--C
Confidence            4789999995 9999999998888999 7999999988776543 2   233322   34442 1233333333322  4


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC-CeEEEEcccC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~iss~~  149 (255)
                      .+|++|+++|..                          ...+.+++.++++ |+++.++...
T Consensus       262 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  297 (374)
T 1cdo_A          262 GVDFSLECVGNV--------------------------GVMRNALESCLKGWGVSVLVGWTD  297 (374)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECSCCS
T ss_pred             CCCEEEECCCCH--------------------------HHHHHHHHHhhcCCcEEEEEcCCC
Confidence            799999998841                          1234556778888 9999987654

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.94  E-value=4e-05  Score=64.44  Aligned_cols=103  Identities=17%  Similarity=0.207  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHH-HhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIE-KFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~-~~g   88 (255)
                      .|++|||+|+ |++|...++.+...|++|+++++++++++.++ +   .+....   .|.++ .+..+++.+.... ..+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~~---~~~~~~~~~~~~i~~~~~~~~g~  239 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-N---CGADVT---LVVDPAKEEESSIIERIRSAIGD  239 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-H---TTCSEE---EECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-H---hCCCEE---EcCcccccHHHHHHHHhccccCC
Confidence            5789999997 89999999988889999999999977665433 2   343322   34443 2222222221110 013


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .+|++|+++|...                          ..+..++.++++|+++.++.
T Consensus       240 g~D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~  272 (352)
T 1e3j_A          240 LPNVTIDCSGNEK--------------------------CITIGINITRTGGTLMLVGM  272 (352)
T ss_dssp             CCSEEEECSCCHH--------------------------HHHHHHHHSCTTCEEEECSC
T ss_pred             CCCEEEECCCCHH--------------------------HHHHHHHHHhcCCEEEEEec
Confidence            6999999988411                          23445667788899999875

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.93  E-value=4.2e-05  Score=64.81  Aligned_cols=97  Identities=22%  Similarity=0.270  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|.+|||+|+ |++|...++.+...|++|+++++++++++.++ ++   +...   ..|..+.+.+++    +.   +.+
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l---Ga~~---vi~~~~~~~~~~----~~---~g~  258 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL---GADE---VVNSRNADEMAA----HL---KSF  258 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCSE---EEETTCHHHHHT----TT---TCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcE---EeccccHHHHHH----hh---cCC
Confidence            4789999998 88999999988889999999999988876554 33   3322   235555443222    21   479


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      |++|.++|...                          ..+..++.++++|+++.++..
T Consensus       259 Dvvid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  290 (369)
T 1uuf_A          259 DFILNTVAAPH--------------------------NLDDFTTLLKRDGTMTLVGAP  290 (369)
T ss_dssp             EEEEECCSSCC--------------------------CHHHHHTTEEEEEEEEECCCC
T ss_pred             CEEEECCCCHH--------------------------HHHHHHHHhccCCEEEEeccC
Confidence            99999998521                          123345677888899988764

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.87  E-value=0.00013  Score=61.40  Aligned_cols=100  Identities=20%  Similarity=0.261  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCC--CHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS--NGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~v~~~~~~~~~~~   87 (255)
                      .|.+|||+|+ |++|...++.+...|+ +|+++++++++++.++ +   .+....   .|..  +.++.   .+++.+..
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~~~---~~~i~~~~  239 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-E---IGADLV---LQISKESPQEI---ARKVEGQL  239 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---TTCSEE---EECSSCCHHHH---HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H---hCCCEE---EcCcccccchH---HHHHHHHh
Confidence            4789999996 8999999988888999 8999999877655432 2   233322   3444  22332   23333322


Q ss_pred             -CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           88 -GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        88 -g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       +.+|++|.++|...                          ..+..++.++++|+++.++.
T Consensus       240 ~~g~D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~  274 (356)
T 1pl8_A          240 GCKPEVTIECTGAEA--------------------------SIQAGIYATRSGGTLVLVGL  274 (356)
T ss_dssp             TSCCSEEEECSCCHH--------------------------HHHHHHHHSCTTCEEEECSC
T ss_pred             CCCCCEEEECCCChH--------------------------HHHHHHHHhcCCCEEEEEec
Confidence             47999999988310                          12344567788999999875

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.86  E-value=2.5e-05  Score=59.29  Aligned_cols=78  Identities=10%  Similarity=0.128  Sum_probs=56.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++.+++++|.| .|.+|..+++.|.+. |+.|++++++++..+.+.    ..+  +.++..|.++.+.++++     ...
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g--~~~~~gd~~~~~~l~~~-----~~~  103 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG--RNVISGDATDPDFWERI-----LDT  103 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT--CCEEECCTTCHHHHHTB-----CSC
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC--CCEEEcCCCCHHHHHhc-----cCC
Confidence            35577899998 599999999999999 999999999987655433    223  33566798887655432     012


Q ss_pred             CCCCEEEEcCC
Q 025273           88 GKIDVVVSNAA   98 (255)
Q Consensus        88 g~~d~lv~~ag   98 (255)
                      .+.|.+|.+.+
T Consensus       104 ~~ad~vi~~~~  114 (183)
T 3c85_A          104 GHVKLVLLAMP  114 (183)
T ss_dssp             CCCCEEEECCS
T ss_pred             CCCCEEEEeCC
Confidence            36899998765

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.86  E-value=0.00013  Score=61.58  Aligned_cols=108  Identities=16%  Similarity=0.152  Sum_probs=66.8

Q ss_pred             CC-CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH---
Q 025273           11 QG-KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK---   86 (255)
Q Consensus        11 ~~-k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~---   86 (255)
                      .| .+|||+||+|++|...++.+...|++|++++++.++++...+.+.+.+....+   |-.+. ..+++.+++.+.   
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~-~~~~~~~~i~~~t~~  241 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQN-NSREFGPTIKEWIKQ  241 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHH-HCGGGHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCcc-chHHHHHHHHHHhhc
Confidence            47 89999999999999999888888999999987766522222222223433222   22110 001222333332   


Q ss_pred             -hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           87 -FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        87 -~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                       .+.+|++|.++|...                          .. ..++.++++|+++.++...
T Consensus       242 ~~~g~Dvvid~~G~~~--------------------------~~-~~~~~l~~~G~~v~~g~~~  278 (364)
T 1gu7_A          242 SGGEAKLALNCVGGKS--------------------------ST-GIARKLNNNGLMLTYGGMS  278 (364)
T ss_dssp             HTCCEEEEEESSCHHH--------------------------HH-HHHHTSCTTCEEEECCCCS
T ss_pred             cCCCceEEEECCCchh--------------------------HH-HHHHHhccCCEEEEecCCC
Confidence             236999999988310                          11 2356778889999987643

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.85  E-value=2e-05  Score=66.51  Aligned_cols=99  Identities=20%  Similarity=0.210  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|.+|||+|+ |++|...++.+...|++|+++++++++.+.+++++   +....   .|..+.+.++       +..+.+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~v---i~~~~~~~~~-------~~~~g~  245 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---GADDY---VIGSDQAKMS-------ELADSL  245 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---CCSCE---EETTCHHHHH-------HSTTTE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---CCcee---eccccHHHHH-------HhcCCC
Confidence            6899999995 99999999988889999999999987665443222   33221   3444443322       222479


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |+++.++|...                          ..+..++.++++|+++.++...
T Consensus       246 D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~~  278 (357)
T 2cf5_A          246 DYVIDTVPVHH--------------------------ALEPYLSLLKLDGKLILMGVIN  278 (357)
T ss_dssp             EEEEECCCSCC--------------------------CSHHHHTTEEEEEEEEECSCCS
T ss_pred             CEEEECCCChH--------------------------HHHHHHHHhccCCEEEEeCCCC
Confidence            99999998532                          0122456778889999988654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.84  E-value=1e-05  Score=58.98  Aligned_cols=71  Identities=18%  Similarity=0.259  Sum_probs=53.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +++++|.|+ |++|+.+++.|.+.|++|++.+|+.+..+.+.+++.   ..+    .+..+.   ++.++       ..|
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~~~----~~~~~~---~~~~~-------~~D   82 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---YEY----VLINDI---DSLIK-------NND   82 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---CEE----EECSCH---HHHHH-------TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---Cce----EeecCH---HHHhc-------CCC
Confidence            899999996 999999999999999999999999988777666653   121    122232   23332       689


Q ss_pred             EEEEcCCCC
Q 025273           92 VVVSNAAAN  100 (255)
Q Consensus        92 ~lv~~ag~~  100 (255)
                      ++|++.+..
T Consensus        83 ivi~at~~~   91 (144)
T 3oj0_A           83 VIITATSSK   91 (144)
T ss_dssp             EEEECSCCS
T ss_pred             EEEEeCCCC
Confidence            999998753

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.84  E-value=0.00012  Score=62.02  Aligned_cols=103  Identities=16%  Similarity=0.237  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   88 (255)
                      .|.+|||+|+ |++|...++.+...|+ +|+++++++++++.++ ++   +....   .|.++ .+++.+.+.++.  .+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~~~v~~~~--~~  259 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF---GATEC---INPQDFSKPIQEVLIEMT--DG  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH---TCSEE---ECGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCceE---eccccccccHHHHHHHHh--CC
Confidence            4789999996 9999999998888999 7999999988776543 33   33222   24432 122333333221  14


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC-CeEEEEcccC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~iss~~  149 (255)
                      .+|++|.++|..                          ...+.+++.++++ |+++.++...
T Consensus       260 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  295 (373)
T 2fzw_A          260 GVDYSFECIGNV--------------------------KVMRAALEACHKGWGVSVVVGVAA  295 (373)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECSCCC
T ss_pred             CCCEEEECCCcH--------------------------HHHHHHHHhhccCCcEEEEEecCC
Confidence            799999998841                          1234456778888 9999987543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.84  E-value=2.4e-05  Score=65.10  Aligned_cols=98  Identities=17%  Similarity=0.146  Sum_probs=64.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      +|||+|++|++|..+++.+...|++|+++++++++++.++ +   .+....   .|..+.+  .+.++++.  .+.+|++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~---lGa~~~---i~~~~~~--~~~~~~~~--~~~~d~v  220 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-V---LGAKEV---LAREDVM--AERIRPLD--KQRWAAA  220 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-H---TTCSEE---EECC-----------CC--SCCEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-H---cCCcEE---EecCCcH--HHHHHHhc--CCcccEE
Confidence            7999999999999999999999999999999987766543 2   233322   3544332  12222221  1369999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |+++|...                           .+..++.++++|+++.++...
T Consensus       221 id~~g~~~---------------------------~~~~~~~l~~~G~~v~~G~~~  249 (328)
T 1xa0_A          221 VDPVGGRT---------------------------LATVLSRMRYGGAVAVSGLTG  249 (328)
T ss_dssp             EECSTTTT---------------------------HHHHHHTEEEEEEEEECSCCS
T ss_pred             EECCcHHH---------------------------HHHHHHhhccCCEEEEEeecC
Confidence            99988410                           233456778889999987654

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.82  E-value=6.9e-05  Score=63.54  Aligned_cols=103  Identities=14%  Similarity=0.182  Sum_probs=68.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   88 (255)
                      .|++|||+|+ |++|..+++.+...|+ +|+++++++++++.++ ++   +....   .|..+ .+++.+.+.++.  .+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~~~~~~~~--~~  260 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV---GATEC---VNPQDYKKPIQEVLTEMS--NG  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCSEE---ECGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCceE---ecccccchhHHHHHHHHh--CC
Confidence            5789999995 9999999999888999 7999999988766543 22   33322   34432 122333333321  14


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC-CeEEEEcccC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~iss~~  149 (255)
                      .+|++|.++|..                          ...+.+++.++++ |+++.++...
T Consensus       261 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  296 (374)
T 2jhf_A          261 GVDFSFEVIGRL--------------------------DTMVTALSCCQEAYGVSVIVGVPP  296 (374)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHHBCTTTCEEEECSCCC
T ss_pred             CCcEEEECCCCH--------------------------HHHHHHHHHhhcCCcEEEEeccCC
Confidence            799999998841                          1234456677888 9999987543

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.81  E-value=7e-05  Score=63.69  Aligned_cols=102  Identities=14%  Similarity=0.198  Sum_probs=69.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCC--CHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS--NGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~v~~~~~~~~~~~   87 (255)
                      .|++|||+| +|++|...++.+...| ++|+++++++++++.++ +   .+....   .|..  +.+++   .+++.+..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~~---~~~v~~~~  263 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-E---IGADLT---LNRRETSVEER---RKAIMDIT  263 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-H---TTCSEE---EETTTSCHHHH---HHHHHHHT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-H---cCCcEE---EeccccCcchH---HHHHHHHh
Confidence            478999999 8999999999888899 59999999987766543 2   333322   2443  13333   33444433


Q ss_pred             -C-CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           88 -G-KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        88 -g-~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                       + .+|++|.++|...                          .++..++.++++|+++.++...
T Consensus       264 ~g~g~Dvvid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~~  301 (380)
T 1vj0_A          264 HGRGADFILEATGDSR--------------------------ALLEGSELLRRGGFYSVAGVAV  301 (380)
T ss_dssp             TTSCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCCCS
T ss_pred             CCCCCcEEEECCCCHH--------------------------HHHHHHHHHhcCCEEEEEecCC
Confidence             2 6999999998421                          1334556778889999987654

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.80  E-value=4.2e-05  Score=59.77  Aligned_cols=73  Identities=18%  Similarity=0.172  Sum_probs=56.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      +++|.|+ |.+|+++++.|.++|+.|++++++++..+.+.+..     ...++..|.++++.++++      ...+.|.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a------~i~~ad~v   69 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDA------EVSKNDVV   69 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHH------TCCTTCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhc------CcccCCEE
Confidence            5899996 89999999999999999999999987766544321     345688999998876643      12368998


Q ss_pred             EEcCC
Q 025273           94 VSNAA   98 (255)
Q Consensus        94 v~~ag   98 (255)
                      |.+.+
T Consensus        70 i~~~~   74 (218)
T 3l4b_C           70 VILTP   74 (218)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            87654

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.80  E-value=2.2e-05  Score=66.33  Aligned_cols=101  Identities=19%  Similarity=0.150  Sum_probs=67.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|++|||+|+ |++|..+++.+...|++|+++++++++++.+++ +   +....   .|..+.++   +.+++.   +.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v---~~~~~~~~---~~~~~~---~~~  244 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M---GADHY---IATLEEGD---WGEKYF---DTF  244 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EEGGGTSC---HHHHSC---SCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c---CCCEE---EcCcCchH---HHHHhh---cCC
Confidence            5789999999 999999999888899999999999887765443 3   33322   24433201   122221   479


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |++|.++|.... .                       ..+.+++.++++|+++.++...
T Consensus       245 D~vid~~g~~~~-~-----------------------~~~~~~~~l~~~G~iv~~g~~~  279 (360)
T 1piw_A          245 DLIVVCASSLTD-I-----------------------DFNIMPKAMKVGGRIVSISIPE  279 (360)
T ss_dssp             EEEEECCSCSTT-C-----------------------CTTTGGGGEEEEEEEEECCCCC
T ss_pred             CEEEECCCCCcH-H-----------------------HHHHHHHHhcCCCEEEEecCCC
Confidence            999999985100 0                       0122356677888999887654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.78  E-value=9.7e-05  Score=53.50  Aligned_cols=73  Identities=18%  Similarity=0.169  Sum_probs=56.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+    .  .+.++..|.++++.++++      ...+.|.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~--g~~~i~gd~~~~~~l~~a------~i~~ad~   74 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R--GVRAVLGNAANEEIMQLA------HLECAKW   74 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEESCTTSHHHHHHT------TGGGCSE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c--CCCEEECCCCCHHHHHhc------CcccCCE
Confidence            56788886 889999999999999999999999877665432    2  345678899998876553      1126788


Q ss_pred             EEEcCC
Q 025273           93 VVSNAA   98 (255)
Q Consensus        93 lv~~ag   98 (255)
                      +|.+.+
T Consensus        75 vi~~~~   80 (140)
T 3fwz_A           75 LILTIP   80 (140)
T ss_dssp             EEECCS
T ss_pred             EEEECC
Confidence            887755

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.78  E-value=5.2e-05  Score=64.26  Aligned_cols=102  Identities=20%  Similarity=0.285  Sum_probs=68.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH---H
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE---K   86 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~---~   86 (255)
                      .|.+|||+|+ |++|...++.+...|+ +|+++++++++.+. .+++   +....   .|.++.+-.    +.+.+   .
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~l---Ga~~v---i~~~~~~~~----~~i~~~~~~  249 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEV---GATAT---VDPSAGDVV----EAIAGPVGL  249 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHH---TCSEE---ECTTSSCHH----HHHHSTTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHc---CCCEE---ECCCCcCHH----HHHHhhhhc
Confidence            4889999998 8999999998888999 79999898776553 3333   33322   355543322    22222   1


Q ss_pred             -hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           87 -FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        87 -~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                       .+.+|+++.++|..                          ...+.+++.++++|+++.++....
T Consensus       250 ~~gg~Dvvid~~G~~--------------------------~~~~~~~~~l~~~G~vv~~G~~~~  288 (370)
T 4ej6_A          250 VPGGVDVVIECAGVA--------------------------ETVKQSTRLAKAGGTVVILGVLPQ  288 (370)
T ss_dssp             STTCEEEEEECSCCH--------------------------HHHHHHHHHEEEEEEEEECSCCCT
T ss_pred             cCCCCCEEEECCCCH--------------------------HHHHHHHHHhccCCEEEEEeccCC
Confidence             24799999998741                          123445677788899999876543

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.77  E-value=6.8e-05  Score=63.36  Aligned_cols=99  Identities=12%  Similarity=0.132  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGL-EGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      .|++|||+||+|++|...++.+.. .|++|+++++++++++.++ +   .+....   .|-.+  +   +.+++.+.. +
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~---lGad~v---i~~~~--~---~~~~v~~~~~~  238 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-S---LGAHHV---IDHSK--P---LAAEVAALGLG  238 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-H---TTCSEE---ECTTS--C---HHHHHHTTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-H---cCCCEE---EeCCC--C---HHHHHHHhcCC
Confidence            578999999999999998877766 5899999999987765543 2   343332   24433  2   223333322 4


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .+|+++.++|..                          ...+.+++.++++|+++.+++
T Consensus       239 g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~  271 (363)
T 4dvj_A          239 APAFVFSTTHTD--------------------------KHAAEIADLIAPQGRFCLIDD  271 (363)
T ss_dssp             CEEEEEECSCHH--------------------------HHHHHHHHHSCTTCEEEECSC
T ss_pred             CceEEEECCCch--------------------------hhHHHHHHHhcCCCEEEEECC
Confidence            799999998731                          123445667788999998853

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.77  E-value=0.00014  Score=61.58  Aligned_cols=101  Identities=15%  Similarity=0.191  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   88 (255)
                      .|.+|||+|+ |++|...++.+...|+ +|+++++++++++.++ +   .+....   .|.++ .+++.+.+.++.  .+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~~~~~v~~~~--~~  264 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-A---LGATDC---LNPRELDKPVQDVITELT--AG  264 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCHHHHHHHHH--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---hCCcEE---EccccccchHHHHHHHHh--CC
Confidence            4789999996 9999999998888999 7999999988766543 2   233322   34432 122333333322  24


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC-CeEEEEcc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~iss  147 (255)
                      .+|++|.++|..                          ...+.+++.++++ |+++.++.
T Consensus       265 g~Dvvid~~G~~--------------------------~~~~~~~~~l~~~~G~iv~~G~  298 (376)
T 1e3i_A          265 GVDYSLDCAGTA--------------------------QTLKAAVDCTVLGWGSCTVVGA  298 (376)
T ss_dssp             CBSEEEESSCCH--------------------------HHHHHHHHTBCTTTCEEEECCC
T ss_pred             CccEEEECCCCH--------------------------HHHHHHHHHhhcCCCEEEEECC
Confidence            799999998841                          1234456777888 99998876

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.76  E-value=6e-05  Score=63.25  Aligned_cols=93  Identities=20%  Similarity=0.247  Sum_probs=67.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|.+|||+|+ |++|...++.+...|++|+++++++++.+.++ +   .+....+     ++.+.+.+          .+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~v~-----~~~~~~~~----------~~  235 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-S---MGVKHFY-----TDPKQCKE----------EL  235 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-H---TTCSEEE-----SSGGGCCS----------CE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-h---cCCCeec-----CCHHHHhc----------CC
Confidence            5899999997 99999999998889999999999988876443 2   3444333     33332221          69


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |+++.++|...                          ..+..++.++++|+++.++...
T Consensus       236 D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~~  268 (348)
T 3two_A          236 DFIISTIPTHY--------------------------DLKDYLKLLTYNGDLALVGLPP  268 (348)
T ss_dssp             EEEEECCCSCC--------------------------CHHHHHTTEEEEEEEEECCCCC
T ss_pred             CEEEECCCcHH--------------------------HHHHHHHHHhcCCEEEEECCCC
Confidence            99999988531                          1233567788889999987543

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.74  E-value=0.0001  Score=62.37  Aligned_cols=103  Identities=17%  Similarity=0.207  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   88 (255)
                      .|++|||+|+ |++|...++.+...|+ +|+++++++++++.++ +   .+....   .|..+ .+++.+.+.++.  .+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~~~~~i~~~t--~g  260 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-E---LGATEC---LNPKDYDKPIYEVICEKT--NG  260 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-H---cCCcEE---EecccccchHHHHHHHHh--CC
Confidence            4789999995 9999999998888899 7999999988766543 2   233322   24332 122333232221  14


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC-CeEEEEcccC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~iss~~  149 (255)
                      .+|++|.++|..                          ...+..++.++++ |+++.++...
T Consensus       261 g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  296 (373)
T 1p0f_A          261 GVDYAVECAGRI--------------------------ETMMNALQSTYCGSGVTVVLGLAS  296 (373)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECCCCC
T ss_pred             CCCEEEECCCCH--------------------------HHHHHHHHHHhcCCCEEEEEccCC
Confidence            799999998841                          1234456778888 9999987543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.73  E-value=8e-05  Score=62.39  Aligned_cols=101  Identities=18%  Similarity=0.228  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .|++|||+|+ |++|...++.+...  |++|+++++++++.+.++ ++   +....   .|..+.   ++..+++.+ ..
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~---~~~~~~~~~-g~  237 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL---GADYV---SEMKDA---ESLINKLTD-GL  237 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH---TCSEE---ECHHHH---HHHHHHHHT-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh---CCCEE---eccccc---hHHHHHhhc-CC
Confidence            6899999999 89999999988888  999999999987766543 33   32222   232220   122333322 12


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      .+|++|.++|..                          ...+.+++.++++|+++.++...
T Consensus       238 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  272 (344)
T 2h6e_A          238 GASIAIDLVGTE--------------------------ETTYNLGKLLAQEGAIILVGMEG  272 (344)
T ss_dssp             CEEEEEESSCCH--------------------------HHHHHHHHHEEEEEEEEECCCCS
T ss_pred             CccEEEECCCCh--------------------------HHHHHHHHHhhcCCEEEEeCCCC
Confidence            699999998841                          12344566778889999987643

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.71  E-value=0.00027  Score=59.87  Aligned_cols=101  Identities=12%  Similarity=0.091  Sum_probs=66.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      ..|++|||+||+|++|...++.+...|++|+.+. ++++++. .++   .+....   .|..+.+    +.+.+.+.. +
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~-~~~---lGa~~v---i~~~~~~----~~~~v~~~t~g  230 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDL-AKS---RGAEEV---FDYRAPN----LAQTIRTYTKN  230 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HHH---TTCSEE---EETTSTT----HHHHHHHHTTT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHH-HHH---cCCcEE---EECCCch----HHHHHHHHccC
Confidence            4689999999999999999999999999988886 5555442 233   343322   3555433    223333332 4


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcc-cCCCeEEEEccc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-QKGSSVVLISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~iv~iss~  148 (255)
                      ++|+++.++|...                          ..+.++..+ +++|+++.++..
T Consensus       231 ~~d~v~d~~g~~~--------------------------~~~~~~~~l~~~~G~iv~~g~~  265 (371)
T 3gqv_A          231 NLRYALDCITNVE--------------------------STTFCFAAIGRAGGHYVSLNPF  265 (371)
T ss_dssp             CCCEEEESSCSHH--------------------------HHHHHHHHSCTTCEEEEESSCC
T ss_pred             CccEEEECCCchH--------------------------HHHHHHHHhhcCCCEEEEEecC
Confidence            6999999988411                          123345556 478899988753

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.70  E-value=0.00028  Score=57.51  Aligned_cols=89  Identities=13%  Similarity=0.174  Sum_probs=66.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCc------------------hhHHHHHHHHHhc--CCeEEEEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ------------------KNVDEAVVKLKAR--GIEVIGVV   67 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~------------------~~~~~~~~~~~~~--~~~~~~~~   67 (255)
                      .|++++|+|.|+ ||+|..+++.|++.|. ++.++|.+.                  .+.+.+++.+...  ..++..+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            477889999986 7999999999999996 599999876                  5666666666654  34677777


Q ss_pred             ecCCCHHHHHHHHHHHHHH-h---CCCCEEEEcCC
Q 025273           68 CHVSNGQQRKNLINQTIEK-F---GKIDVVVSNAA   98 (255)
Q Consensus        68 ~Dv~~~~~v~~~~~~~~~~-~---g~~d~lv~~ag   98 (255)
                      .++++.+.++.+++.+... +   ...|++|.+..
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            8888777777776544321 1   36899997754

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.70  E-value=0.00031  Score=60.14  Aligned_cols=43  Identities=12%  Similarity=0.093  Sum_probs=38.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   52 (255)
                      .+.+++|+|+|+ |.+|..+++.+...|++|++++++.+.++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            367899999996 8999999999999999999999998876654

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.70  E-value=0.00012  Score=60.93  Aligned_cols=119  Identities=13%  Similarity=0.130  Sum_probs=74.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC--e-----EEEEeCCc--hhHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA--S-----VVVSSRKQ--KNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~--~-----V~~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      .++|+||||+|.||++++..|+..|.  .     ++++|+++  +.++....++.... .-..-  ..+++  ...    
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~--~~~~~--~~~----   74 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKD--VIATD--KEE----   74 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEE--EEEES--CHH----
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCC--EEEcC--CcH----
Confidence            36799999999999999999998875  4     99999975  35555555665431 21211  11111  111    


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                         +.+...|++|+.||.....    ..+   ..+.++.|......+.+.+..+-.++-.++++|-.
T Consensus        75 ---~~~~daDvVvitAg~prkp----G~t---R~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP  131 (333)
T 5mdh_A           75 ---IAFKDLDVAILVGSMPRRD----GME---RKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP  131 (333)
T ss_dssp             ---HHTTTCSEEEECCSCCCCT----TCC---TTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             ---HHhCCCCEEEEeCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence               2234789999999865321    122   22346777777777777766554333357777753

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.70  E-value=6e-05  Score=64.02  Aligned_cols=103  Identities=17%  Similarity=0.241  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   88 (255)
                      .|.+|||+|+ |++|...++.+...|+ +|+++++++++++.+ ++   .+....   .|..+ .+++.+.+.++.  .+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~---lGa~~v---i~~~~~~~~~~~~i~~~~--~g  262 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KK---FGVNEF---VNPKDHDKPIQEVIVDLT--DG  262 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HT---TTCCEE---ECGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCcEE---EccccCchhHHHHHHHhc--CC
Confidence            4789999998 9999999998888999 799999998876643 22   243332   24432 222333333221  24


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC-CeEEEEcccC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~iss~~  149 (255)
                      .+|++|.++|..                          ...+..+..++++ |+++.++...
T Consensus       263 g~D~vid~~g~~--------------------------~~~~~~~~~l~~g~G~iv~~G~~~  298 (378)
T 3uko_A          263 GVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVAA  298 (378)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECSCCC
T ss_pred             CCCEEEECCCCH--------------------------HHHHHHHHHhhccCCEEEEEcccC
Confidence            799999998841                          1234456777875 9999988543

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.70  E-value=0.00039  Score=57.52  Aligned_cols=114  Identities=18%  Similarity=0.176  Sum_probs=72.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +|.|+||+|.+|..++..|+..|  ..|+++|+++  .+....++....  .++....    ...+.++.       +..
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a-------~~~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDC-------LKG   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHH-------HTT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHH-------hCC
Confidence            68999999999999999999888  6799999987  334444444321  1222211    01122222       237


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      .|++|+.+|.....    ..+..   +.+..|+.....+.+.+.++- +.+.++++|-.
T Consensus        69 aDvVvi~ag~~~~~----g~~r~---dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNP  119 (314)
T 1mld_A           69 CDVVVIPAGVPRKP----GMTRD---DLFNTNATIVATLTAACAQHC-PDAMICIISNP  119 (314)
T ss_dssp             CSEEEECCSCCCCT----TCCGG---GGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSC
T ss_pred             CCEEEECCCcCCCC----CCcHH---HHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCC
Confidence            89999999975422    12221   235677777777776666544 56788887643

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.69  E-value=0.00014  Score=62.29  Aligned_cols=73  Identities=27%  Similarity=0.358  Sum_probs=54.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++.|++|+|.|+ |++|+.+++.|...|+ +|++++|+.++++.+.+++   +..  .  .+.   +++.+.+       
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~--~--~~~---~~l~~~l-------  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGE--A--VRF---DELVDHL-------  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCE--E--CCG---GGHHHHH-------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCc--e--ecH---HhHHHHh-------
Confidence            468999999998 9999999999999998 8999999988766665554   222  1  122   2333333       


Q ss_pred             CCCCEEEEcCCC
Q 025273           88 GKIDVVVSNAAA   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                      ...|++|++.+.
T Consensus       226 ~~aDvVi~at~~  237 (404)
T 1gpj_A          226 ARSDVVVSATAA  237 (404)
T ss_dssp             HTCSEEEECCSS
T ss_pred             cCCCEEEEccCC
Confidence            268999999874

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.66  E-value=0.00018  Score=60.14  Aligned_cols=119  Identities=12%  Similarity=0.114  Sum_probs=72.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++++|.|+|++|.+|..++..++..|.  .|+++|++.+.++....++.....    ...++....+..+.       +
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~----~~~~i~~t~d~~~a-------l   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF----EGLNLTFTSDIKEA-------L   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC----TTCCCEEESCHHHH-------H
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC----CCCceEEcCCHHHH-------h
Confidence            4568899999999999999999999984  699999998877766555554210    00111111112222       2


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCe-EEEEcc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSS-VVLISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-iv~iss  147 (255)
                      ..-|++|.++|....    ...+   -.+.+..|..-...+.+.+.++- +.+. ++++|-
T Consensus        75 ~dADvVvitaG~p~k----pG~~---R~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvsN  127 (343)
T 3fi9_A           75 TDAKYIVSSGGAPRK----EGMT---REDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIFN  127 (343)
T ss_dssp             TTEEEEEECCC-----------C---HHHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECSS
T ss_pred             CCCCEEEEccCCCCC----CCCC---HHHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEecC
Confidence            378999999996432    1222   23446677666666666555543 4554 667764

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.60  E-value=8.9e-05  Score=62.45  Aligned_cols=99  Identities=11%  Similarity=0.132  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCCchHHHH-HHHH-HHcCCe-EEEEeCCch---hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGI-AERL-GLEGAS-VVVSSRKQK---NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~-a~~l-~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      ++.+|||+|+ |++|... ++.+ ...|++ |++++++++   +++.++ +   .+...  +  |..+. ++.+ +.++ 
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~---lGa~~--v--~~~~~-~~~~-i~~~-  239 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-E---LDATY--V--DSRQT-PVED-VPDV-  239 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-H---TTCEE--E--ETTTS-CGGG-HHHH-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-H---cCCcc--c--CCCcc-CHHH-HHHh-
Confidence            3489999999 9999999 7776 677998 999999887   655432 2   23322  2  54432 2223 3333 


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                        .+.+|++|.++|...                          ..+.+++.++++|+++.++...
T Consensus       240 --~gg~Dvvid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~g~~~  276 (357)
T 2b5w_A          240 --YEQMDFIYEATGFPK--------------------------HAIQSVQALAPNGVGALLGVPS  276 (357)
T ss_dssp             --SCCEEEEEECSCCHH--------------------------HHHHHHHHEEEEEEEEECCCCC
T ss_pred             --CCCCCEEEECCCChH--------------------------HHHHHHHHHhcCCEEEEEeCCC
Confidence              247999999988310                          2334556778889999988654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.60  E-value=0.00041  Score=58.54  Aligned_cols=114  Identities=17%  Similarity=0.138  Sum_probs=73.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecC-----------CCHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV-----------SNGQQRKN   78 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----------~~~~~v~~   78 (255)
                      +.+++|+|.|+ |.+|..+++.+...|++|++++|+.+.++.+.+    .+.++  +..|+           ..++....
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lGa~~--~~l~~~~~~~~gya~~~~~~~~~~  254 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VGAQW--LDLGIDAAGEGGYARELSEAERAQ  254 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TTCEE--CCCC-------------CHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeE--EeccccccccccchhhhhHHHHhh
Confidence            57899999998 799999999999999999999999988776543    23332  22211           01111222


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           79 LINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      -.+.+.+.....|++|+++.......+ .-.+                   +..++.|+++..||.++.-.+
T Consensus       255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap-~Lvt-------------------~emv~~MkpGsVIVDvA~d~G  306 (381)
T 3p2y_A          255 QQQALEDAITKFDIVITTALVPGRPAP-RLVT-------------------AAAATGMQPGSVVVDLAGETG  306 (381)
T ss_dssp             HHHHHHHHHTTCSEEEECCCCTTSCCC-CCBC-------------------HHHHHTSCTTCEEEETTGGGT
T ss_pred             hHHHHHHHHhcCCEEEECCCCCCcccc-eeec-------------------HHHHhcCCCCcEEEEEeCCCC
Confidence            333444555689999998755321111 1122                   335677888888888886543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.58  E-value=0.00042  Score=59.33  Aligned_cols=77  Identities=16%  Similarity=0.296  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      .|.+|||+|+ |++|...++.+...|+ +|+++++++++++.+ +++   +....   .|-.+.+    +.+++.+.. +
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~----~~~~i~~~t~g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---GADHV---IDPTKEN----FVEAVLDYTNG  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCSEE---ECTTTSC----HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCCEE---EcCCCCC----HHHHHHHHhCC
Confidence            5789999998 9999999998888999 799999998776543 333   33322   2544432    233333333 2


Q ss_pred             -CCCEEEEcCCC
Q 025273           89 -KIDVVVSNAAA   99 (255)
Q Consensus        89 -~~d~lv~~ag~   99 (255)
                       .+|+++.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence             69999999884

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.56  E-value=0.00074  Score=54.38  Aligned_cols=66  Identities=18%  Similarity=0.214  Sum_probs=51.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|+++|.|+ ||.|++++..|++.|.+|+++.|+.++++.+. ++.     +...  +..+.              ...|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~-----~~~~--~~~~l--------------~~~D  174 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG-----CDCF--MEPPK--------------SAFD  174 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT-----CEEE--SSCCS--------------SCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC-----CeEe--cHHHh--------------ccCC
Confidence            799999997 99999999999999988999999999888877 542     1111  22211              1589


Q ss_pred             EEEEcCCCC
Q 025273           92 VVVSNAAAN  100 (255)
Q Consensus        92 ~lv~~ag~~  100 (255)
                      ++||+....
T Consensus       175 iVInaTp~G  183 (269)
T 3phh_A          175 LIINATSAS  183 (269)
T ss_dssp             EEEECCTTC
T ss_pred             EEEEcccCC
Confidence            999997654

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=97.56  E-value=0.00012  Score=61.41  Aligned_cols=101  Identities=19%  Similarity=0.277  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      .|.+|||+|+ |++|...++.+...|+ +|+++++++++++.+ +++   +....   .|-.+.+    +.+++.+.. +
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~~~~~~----~~~~v~~~t~g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY---GATDI---INYKNGD----IVEQILKATDG  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH---TCCEE---ECGGGSC----HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh---CCceE---EcCCCcC----HHHHHHHHcCC
Confidence            4789999985 9999999988888899 799999987765543 333   33322   2433322    233343433 2


Q ss_pred             -CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           89 -KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                       .+|+++.++|...                          ..+..++.++++|+++.++...
T Consensus       234 ~g~D~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~  269 (352)
T 3fpc_A          234 KGVDKVVIAGGDVH--------------------------TFAQAVKMIKPGSDIGNVNYLG  269 (352)
T ss_dssp             CCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCCCC
T ss_pred             CCCCEEEECCCChH--------------------------HHHHHHHHHhcCCEEEEecccC
Confidence             5999999988521                          2344566778889999987544

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.56  E-value=0.00016  Score=59.91  Aligned_cols=96  Identities=18%  Similarity=0.261  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      -.|.+|||+||+|++|...++.+...|++|+++++.. +. ...+++   +...   ..|..+.+.+.+.       ...
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~l---Ga~~---~i~~~~~~~~~~~-------~~g  215 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKAL---GAEQ---CINYHEEDFLLAI-------STP  215 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHH---TCSE---EEETTTSCHHHHC-------CSC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHc---CCCE---EEeCCCcchhhhh-------ccC
Confidence            3589999999999999999999999999999887543 32 233333   3332   2355444322221       247


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      +|+++.+.|..                           ..+..++.++++|+++.++.
T Consensus       216 ~D~v~d~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~  246 (321)
T 3tqh_A          216 VDAVIDLVGGD---------------------------VGIQSIDCLKETGCIVSVPT  246 (321)
T ss_dssp             EEEEEESSCHH---------------------------HHHHHGGGEEEEEEEEECCS
T ss_pred             CCEEEECCCcH---------------------------HHHHHHHhccCCCEEEEeCC
Confidence            99999998831                           11345678888899998753

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.56  E-value=0.00078  Score=55.87  Aligned_cols=118  Identities=12%  Similarity=0.040  Sum_probs=68.8

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      ++-++++|.|+|+ |.+|.+++..|+..|.  .|+++|++++.++....++....   ..+.+. .|  +.         
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~-~~--~~---------   71 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY-SA--EY---------   71 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CG---------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE-EC--cH---------
Confidence            4456789999996 9999999999999987  79999999888777666665431   122222 12  11         


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                        +.+..-|++|..||.....    ..+   -.+.++.|.--...+.+.+.++ .+.+.++++|-.
T Consensus        72 --~a~~~aDiVvi~ag~~~kp----G~t---R~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvtNP  127 (326)
T 3vku_A           72 --SDAKDADLVVITAGAPQKP----GET---RLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANP  127 (326)
T ss_dssp             --GGGTTCSEEEECCCCC-----------------------CHHHHHHHHHTT-TCCSEEEECSSS
T ss_pred             --HHhcCCCEEEECCCCCCCC----Cch---HHHHHHHHHHHHHHHHHHHHhc-CCceEEEEccCc
Confidence              1234789999999974321    122   2334555655445555555443 256677777643

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.54  E-value=1.4e-05  Score=64.80  Aligned_cols=43  Identities=16%  Similarity=0.201  Sum_probs=37.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEA   52 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~   52 (255)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++.+
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            467899999997 7999999999999998 799999998776544

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.53  E-value=0.00029  Score=59.30  Aligned_cols=106  Identities=15%  Similarity=0.267  Sum_probs=62.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|.+|||+||+|++|...++.+...|++|+++.+..+..+...+.+.+.+....+   |-.+ ...++ +.++....+.+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~-~~~~~-~~~~~~~~~~~  241 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---TEEE-LRRPE-MKNFFKDMPQP  241 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE---EHHH-HHSGG-GGGTTSSSCCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE---ecCc-chHHH-HHHHHhCCCCc
Confidence            5899999999999999999888888999887776544322222223333443322   2111 00011 11111111258


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      |++|.++|...                          . ...++.++++|+++.++..
T Consensus       242 Dvvid~~g~~~--------------------------~-~~~~~~l~~~G~iv~~G~~  272 (357)
T 1zsy_A          242 RLALNCVGGKS--------------------------S-TELLRQLARGGTMVTYGGM  272 (357)
T ss_dssp             SEEEESSCHHH--------------------------H-HHHHTTSCTTCEEEECCCC
T ss_pred             eEEEECCCcHH--------------------------H-HHHHHhhCCCCEEEEEecC
Confidence            99999987310                          1 1245777889999998754

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.53  E-value=0.00051  Score=56.40  Aligned_cols=96  Identities=18%  Similarity=0.239  Sum_probs=65.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+++++++|.|+ |.+|+++++.|...|++|++.+|+.++.+...    +.+.+  .+  +   .++++++       +
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~----~~g~~--~~--~---~~~l~~~-------l  213 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT----EMGLV--PF--H---TDELKEH-------V  213 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCE--EE--E---GGGHHHH-------S
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCCCe--EE--c---hhhHHHH-------h
Confidence            4588999999996 89999999999999999999999976544332    22322  11  1   1223333       2


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      ...|+++++....       ..+                   +..+..|++++.+|+++..
T Consensus       214 ~~aDvVi~~~p~~-------~i~-------------------~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          214 KDIDICINTIPSM-------ILN-------------------QTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             TTCSEEEECCSSC-------CBC-------------------HHHHTTSCTTCEEEECSST
T ss_pred             hCCCEEEECCChh-------hhC-------------------HHHHHhCCCCCEEEEEeCC
Confidence            3789999987741       011                   1134677888889998853

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.53  E-value=0.00038  Score=55.64  Aligned_cols=81  Identities=16%  Similarity=0.285  Sum_probs=58.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCc-------------------hhHHHHHHHHHhc--CCeEEEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ-------------------KNVDEAVVKLKAR--GIEVIGV   66 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~   66 (255)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++.++|++.                   .+.+.+++.+...  ..++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            367899999997 6799999999999997 488887653                   5666677777654  3456665


Q ss_pred             EecCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      ..+++ .+.+.++++       ..|++|++..
T Consensus       104 ~~~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             CSCCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             eccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            55554 345555544       5799998754

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.50  E-value=0.00034  Score=59.52  Aligned_cols=43  Identities=12%  Similarity=0.089  Sum_probs=38.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   52 (255)
                      .+.+++|+|+|+ |.+|+.+++.+...|++|++++|+..+++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            467999999996 8999999999999999999999998876654

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=97.46  E-value=0.00025  Score=60.00  Aligned_cols=101  Identities=10%  Similarity=0.166  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      .|++|||+|+ |++|...++.+...|+ +|+++++++++++.++ ++   +....   .|..+.+-    .+++.+.. +
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~~~----~~~~~~~~~g  257 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL---GATHV---INSKTQDP----VAAIKEITDG  257 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH---TCSEE---EETTTSCH----HHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc---CCCEE---ecCCccCH----HHHHHHhcCC
Confidence            4789999995 9999999988888899 5999999987765442 33   33322   24443222    22333322 3


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      .+|++|.++|..                          ...+..++.++++|+++.++...
T Consensus       258 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~  292 (371)
T 1f8f_A          258 GVNFALESTGSP--------------------------EILKQGVDALGILGKIAVVGAPQ  292 (371)
T ss_dssp             CEEEEEECSCCH--------------------------HHHHHHHHTEEEEEEEEECCCCS
T ss_pred             CCcEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEeCCCC
Confidence            699999998831                          12344567788889999987654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.41  E-value=0.0009  Score=54.71  Aligned_cols=95  Identities=18%  Similarity=0.269  Sum_probs=63.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .++|++++|.| .|.||+++++.|...|++|++.+|+.++.+...    ..+.+.  +  +   .++++++       +.
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g~~~--~--~---~~~l~~~-------l~  212 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIA----EMGMEP--F--H---ISKAAQE-------LR  212 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTSEE--E--E---GGGHHHH-------TT
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCCCee--c--C---hhhHHHH-------hc
Confidence            58899999999 589999999999999999999999976544332    223222  1  1   1223333       23


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      ..|+++++....       ..+.                   ..+..|++++.+|+++..
T Consensus       213 ~aDvVi~~~p~~-------~i~~-------------------~~l~~mk~~~~lin~ar~  246 (293)
T 3d4o_A          213 DVDVCINTIPAL-------VVTA-------------------NVLAEMPSHTFVIDLASK  246 (293)
T ss_dssp             TCSEEEECCSSC-------CBCH-------------------HHHHHSCTTCEEEECSST
T ss_pred             CCCEEEECCChH-------HhCH-------------------HHHHhcCCCCEEEEecCC
Confidence            789999987531       1111                   123466778889988753

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.41  E-value=0.00044  Score=58.24  Aligned_cols=77  Identities=14%  Similarity=0.222  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG-   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   88 (255)
                      .|.+|||+|+ |++|...++.+... |++|+++++++++++.++ +   .+....   .|..+.  +.+.+.++.  .+ 
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~--~~~~v~~~~--~g~  253 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-R---LGADHV---VDARRD--PVKQVMELT--RGR  253 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-H---TTCSEE---EETTSC--HHHHHHHHT--TTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-H---hCCCEE---Eeccch--HHHHHHHHh--CCC
Confidence            5789999999 89999999988888 999999999987766443 2   233322   355543  333333221  13 


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|++|.++|.
T Consensus       254 g~Dvvid~~G~  264 (359)
T 1h2b_A          254 GVNVAMDFVGS  264 (359)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCcEEEECCCC
Confidence            69999999884

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=97.41  E-value=0.00055  Score=57.22  Aligned_cols=101  Identities=17%  Similarity=0.163  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      .|.+|||+|+ |++|...++.+... |++|+++++++++++.++ +   .+....+   |-.+ +    +.+++.+.. +
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~---lGa~~~i---~~~~-~----~~~~v~~~t~g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-E---VGADAAV---KSGA-G----AADAIRELTGG  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-H---TTCSEEE---ECST-T----HHHHHHHHHGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---cCCCEEE---cCCC-c----HHHHHHHHhCC
Confidence            5789999998 99999988888777 788999999987766432 2   3433322   3222 2    223333322 2


Q ss_pred             -CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           89 -KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                       .+|+++.++|..                          ...+..++.++++|+++.++...+
T Consensus       238 ~g~d~v~d~~G~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~~  274 (345)
T 3jv7_A          238 QGATAVFDFVGAQ--------------------------STIDTAQQVVAVDGHISVVGIHAG  274 (345)
T ss_dssp             GCEEEEEESSCCH--------------------------HHHHHHHHHEEEEEEEEECSCCTT
T ss_pred             CCCeEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEECCCCC
Confidence             799999998841                          133445667788899999876543

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.39  E-value=0.00063  Score=57.72  Aligned_cols=80  Identities=16%  Similarity=0.275  Sum_probs=54.6

Q ss_pred             CCCEEEEEc-CCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTA-STQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItG-a~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|.+|||.| |+|++|...++.+...|++|+++++++++.+.+++    .+....   .|-.+.+-.+++ .++... ..
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~---~~~~~~~~~~~v-~~~t~~-~g  240 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA----QGAVHV---CNAASPTFMQDL-TEALVS-TG  240 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH----TTCSCE---EETTSTTHHHHH-HHHHHH-HC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh----CCCcEE---EeCCChHHHHHH-HHHhcC-CC
Confidence            578899997 99999999999988899999999999877665432    333322   244443322222 222111 26


Q ss_pred             CCEEEEcCCC
Q 025273           90 IDVVVSNAAA   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|+++.++|.
T Consensus       241 ~d~v~d~~g~  250 (379)
T 3iup_A          241 ATIAFDATGG  250 (379)
T ss_dssp             CCEEEESCEE
T ss_pred             ceEEEECCCc
Confidence            9999999985

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.36  E-value=0.0008  Score=57.27  Aligned_cols=112  Identities=14%  Similarity=0.128  Sum_probs=70.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEec----------------CCC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH----------------VSN   72 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D----------------v~~   72 (255)
                      .+.+.+|+|.|+ |.+|..+++.+...|++|++++++...++...+    .+.+  ++..+                +++
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----~G~~--~~~~~~~~~~d~~~~~~ya~e~s~  259 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS----LGAK--FIAVEDEEFKAAETAGGYAKEMSG  259 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH----TTCE--ECCCCC-----------------C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCCc--eeecccccccccccccchhhhcch
Confidence            357889999998 799999999999999999999999887665543    2333  22222                222


Q ss_pred             HHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           73 GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        73 ~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      +. ...-.+.+.+.....|++|+++.......+ .-.+                   +..+..|+++..||.++.-
T Consensus       260 ~~-~~~~~~~l~e~l~~aDVVI~tvlipg~~ap-~Lvt-------------------~emv~~Mk~GsVIVDvA~d  314 (405)
T 4dio_A          260 EY-QVKQAALVAEHIAKQDIVITTALIPGRPAP-RLVT-------------------REMLDSMKPGSVVVDLAVE  314 (405)
T ss_dssp             HH-HHHHHHHHHHHHHTCSEEEECCCCSSSCCC-CCBC-------------------HHHHTTSCTTCEEEETTGG
T ss_pred             hh-hhhhHhHHHHHhcCCCEEEECCcCCCCCCC-EEec-------------------HHHHhcCCCCCEEEEEeCC
Confidence            21 011112222223478999998765432111 1122                   3456788888888888863

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.33  E-value=0.0052  Score=50.93  Aligned_cols=114  Identities=16%  Similarity=0.058  Sum_probs=74.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .+++.|+|+ |.+|.+++..|+..|.  .|+++|++++.++....++...    +..+.....|   .           +
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------~   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------E   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------H
Confidence            578999996 9999999999999997  7999999988877765555542    1122322222   1           1


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      .+..-|++|..+|....    ...+.   ...+..|..-...+.+.+... .+.+.++++|-.
T Consensus        70 a~~~aDvVvi~ag~p~k----pG~~R---~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNP  124 (326)
T 3pqe_A           70 DCKDADIVCICAGANQK----PGETR---LELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNP  124 (326)
T ss_dssp             GGTTCSEEEECCSCCCC----TTCCH---HHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred             HhCCCCEEEEecccCCC----CCccH---HHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCCh
Confidence            23378999999996432    12332   234566665555555555544 256677777754

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.28  E-value=0.00035  Score=55.06  Aligned_cols=72  Identities=6%  Similarity=-0.041  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      .+.++|.|+ |.+|+.+++.|.++|+ |++++++++..+.+.     .  .+.++..|.++.+.++++      .....|
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a------~i~~ad   73 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKA------NVRGAR   73 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHT------TCTTCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhc------Ccchhc
Confidence            467999997 8999999999999999 999999987655432     2  366788999988876554      123678


Q ss_pred             EEEEcCC
Q 025273           92 VVVSNAA   98 (255)
Q Consensus        92 ~lv~~ag   98 (255)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (234)
T 2aef_A           74 AVIVDLE   80 (234)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            8887654

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.28  E-value=0.0057  Score=49.94  Aligned_cols=143  Identities=9%  Similarity=-0.012  Sum_probs=82.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +++.|+|+ |.+|.+++..|+..|.  .|++.|++++.++....++...    +....+...  ++.+.           
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------   66 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------   66 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH-----------
Confidence            36889999 9999999999999997  8999999988766433333221    111122111  12222           


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc--------cCCCCCCh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG--------YQPQSSMA  158 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~--------~~~~~~~~  158 (255)
                      +..-|++|..+|....    ...+..   +.+..|..-...+.+.+.++ .+.+.++++|-...        ..+++...
T Consensus        67 ~~~aDiVViaag~~~k----pG~~R~---dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsNPvd~~t~~~~k~~g~p~~r  138 (294)
T 1oju_A           67 LKGSEIIVVTAGLARK----PGMTRL---DLAHKNAGIIKDIAKKIVEN-APESKILVVTNPMDVMTYIMWKESGKPRNE  138 (294)
T ss_dssp             GTTCSEEEECCCCCCC----SSCCHH---HHHHHHHHHHHHHHHHHHTT-STTCEEEECSSSHHHHHHHHHHHSCCCTTS
T ss_pred             hCCCCEEEECCCCCCC----CCCcHH---HHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCcchHHHHHHHHhcCCCHHH
Confidence            2368999999997432    223333   33556654444455555444 35678888774322        12233334


Q ss_pred             hhHhh-HHHHHHHHHHHHHHh
Q 025273          159 MYGVT-KTALLGLTKALAAEM  178 (255)
Q Consensus       159 ~y~~s-K~a~~~l~~~la~e~  178 (255)
                      .++.+ -.=...+-..++ ++
T Consensus       139 viG~gt~LD~~R~~~~la-~l  158 (294)
T 1oju_A          139 VFGMGNQLDSQRLKERLY-NA  158 (294)
T ss_dssp             EEECSHHHHHHHHHHHHH-HT
T ss_pred             EeecccccHHHHHHHHHH-Hh
Confidence            44442 222344555666 65

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.26  E-value=0.0068  Score=50.38  Aligned_cols=79  Identities=15%  Similarity=0.061  Sum_probs=54.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      +..+.++|.|.|+ |.+|.+++..|+..|+ .|++.+++++.++.....+...      ..++.+.    ++.+   +.+
T Consensus         5 ~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~---ea~   76 (331)
T 1pzg_A            5 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSYE---AAL   76 (331)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSHH---HHH
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCHH---HHh
Confidence            3334568999998 9999999999999998 8999999988777643333221      1223221    2222   122


Q ss_pred             HHHHHHhCCCCEEEEcCCCCC
Q 025273           81 NQTIEKFGKIDVVVSNAAANP  101 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~  101 (255)
                             ..-|++|..+|...
T Consensus        77 -------~~aDiVi~a~g~p~   90 (331)
T 1pzg_A           77 -------TGADCVIVTAGLTK   90 (331)
T ss_dssp             -------TTCSEEEECCSCSS
T ss_pred             -------CCCCEEEEccCCCC
Confidence                   36899999998643

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.23  E-value=0.00058  Score=52.86  Aligned_cols=42  Identities=26%  Similarity=0.431  Sum_probs=37.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK   55 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (255)
                      +++|+||+|.+|.++++.|++.|++|++++|+.+..+.+.+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999998877666544

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.23  E-value=0.0017  Score=53.87  Aligned_cols=89  Identities=11%  Similarity=0.146  Sum_probs=57.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc-------------------hhHHHHHHHHHhcC--CeEEEEE
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ-------------------KNVDEAVVKLKARG--IEVIGVV   67 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~~   67 (255)
                      +++++|+|.|+ ||+|.++++.|++.|.. +.++|++.                   .+.+.+++.+....  .++..+.
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~  110 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  110 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEe
Confidence            67899999986 79999999999999975 88888753                   45666666666654  3555555


Q ss_pred             ecC-------CCHHHHHHHHHHHHHHhCCCCEEEEcCCC
Q 025273           68 CHV-------SNGQQRKNLINQTIEKFGKIDVVVSNAAA   99 (255)
Q Consensus        68 ~Dv-------~~~~~v~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      .++       ++++....-.+.+.+.+...|++|++..-
T Consensus       111 ~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn  149 (340)
T 3rui_A          111 LSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS  149 (340)
T ss_dssp             CCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             ccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCC
Confidence            444       22211111111222223368999988653

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.21  E-value=0.0003  Score=57.15  Aligned_cols=45  Identities=18%  Similarity=0.221  Sum_probs=39.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVV   54 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~   54 (255)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+.++++.+.+
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            478999999997 6999999999999998 79999999887666543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.21  E-value=0.0076  Score=49.89  Aligned_cols=114  Identities=18%  Similarity=0.112  Sum_probs=71.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      +.+++.|+|+ |.+|.+++..|+..|. .|++.|++++.++....++...      ..++.. ..|   .+         
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~---------   71 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YA---------   71 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GG---------
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HH---------
Confidence            3568999998 9999999999999998 8999999998776544444321      223322 112   11         


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                        .+..-|++|..+|.....    ..+   -.+.+..|..-...+.+.+..+- +.+.++++|-.
T Consensus        72 --a~~~aDiVIiaag~p~k~----G~~---R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNP  126 (324)
T 3gvi_A           72 --AIEGADVVIVTAGVPRKP----GMS---RDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNP  126 (324)
T ss_dssp             --GGTTCSEEEECCSCCCC------------CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred             --HHCCCCEEEEccCcCCCC----CCC---HHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCC
Confidence              123789999999964321    122   12334556555555555554442 56778877754

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.21  E-value=0.015  Score=48.50  Aligned_cols=119  Identities=12%  Similarity=0.103  Sum_probs=71.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEeCCch--hHHHHHHHHHhc--CCeEEEEEecCCCHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQK--NVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKN   78 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   78 (255)
                      .+.-+|.|+||+|+||+.++..|+....       .++++|.++.  .++...-+++..  .........+  +.+    
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~~----   95 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DPR----   95 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CHH----
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--ChH----
Confidence            3455899999999999999999987543       6999998764  344445555443  2222222221  111    


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           79 LINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                            +.+..-|++|..||...+    ..++.++   .++.|..=.-.+.+.+.++-.++..|+.+|-
T Consensus        96 ------~a~~~advVvi~aG~prk----pGmtR~D---Ll~~Na~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           96 ------VAFDGVAIAIMCGAFPRK----AGMERKD---LLEMNARIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             ------HHTTTCSEEEECCCCCCC----TTCCHHH---HHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ------HHhCCCCEEEECCCCCCC----CCCCHHH---HHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence                  223479999999997542    2344443   4556665444455544443334456666664

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=97.18  E-value=0.0026  Score=48.83  Aligned_cols=106  Identities=14%  Similarity=0.077  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-------------cCCeEEEEEecCCCHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-------------RGIEVIGVVCHVSNGQQRK   77 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~Dv~~~~~v~   77 (255)
                      ++.+||-.|++.|.   .+..|+++|++|+.+|.++..++..++....             ...++.++++|+.+...-.
T Consensus        22 ~~~~vLD~GCG~G~---~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~   98 (203)
T 1pjz_A           22 PGARVLVPLCGKSQ---DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   98 (203)
T ss_dssp             TTCEEEETTTCCSH---HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEeCCCCcH---hHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence            57899999988773   3456777899999999999988877766532             1357889999998764211


Q ss_pred             HHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           78 NLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                               .+..|+++.+.....       .+.++..           .+++.+...++++|++++++
T Consensus        99 ---------~~~fD~v~~~~~l~~-------l~~~~~~-----------~~l~~~~r~LkpgG~~~l~~  140 (203)
T 1pjz_A           99 ---------IGHCAAFYDRAAMIA-------LPADMRE-----------RYVQHLEALMPQACSGLLIT  140 (203)
T ss_dssp             ---------HHSEEEEEEESCGGG-------SCHHHHH-----------HHHHHHHHHSCSEEEEEEEE
T ss_pred             ---------CCCEEEEEECcchhh-------CCHHHHH-----------HHHHHHHHHcCCCcEEEEEE
Confidence                     127899987654321       2222221           24566677888888855544

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.18  E-value=0.005  Score=50.79  Aligned_cols=114  Identities=19%  Similarity=0.171  Sum_probs=71.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCC--chhHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRK--QKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~--~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      +.+++.|+|+ |.+|..++..|+..|. .|++.|++  ++.++....++...      ..++..  .+  +.        
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t~--d~--------   73 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--TS--DY--------   73 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--ES--CG--------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--cC--CH--------
Confidence            3678999997 9999999999999999 99999999  44444443333221      222322  11  11        


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                         +.+...|++|.++|.....    ..+.   .+.+..|..-...+.+.+.++ .+.+.++++|-.
T Consensus        74 ---~a~~~aDvVIiaag~p~kp----g~~R---~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsNP  129 (315)
T 3tl2_A           74 ---ADTADSDVVVITAGIARKP----GMSR---DDLVATNSKIMKSITRDIAKH-SPNAIIVVLTNP  129 (315)
T ss_dssp             ---GGGTTCSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSS
T ss_pred             ---HHhCCCCEEEEeCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCCh
Confidence               1234799999999975321    2333   334556665555555555544 356677877743

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.13  E-value=0.00025  Score=56.70  Aligned_cols=70  Identities=11%  Similarity=0.140  Sum_probs=49.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++ +++|.|+ ||.|++++..|++.|+ +|++++|+.++++.+.+++       ...  +.   +++.+.++      
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~-------~~~--~~---~~~~~~~~------  165 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV-------KIF--SL---DQLDEVVK------  165 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC-------EEE--EG---GGHHHHHH------
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-------ccC--CH---HHHHhhhc------
Confidence            4567 8999987 8999999999999998 7999999987655543221       111  11   22333222      


Q ss_pred             CCCCEEEEcCCC
Q 025273           88 GKIDVVVSNAAA   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                       ..|++||+...
T Consensus       166 -~aDiVInatp~  176 (253)
T 3u62_A          166 -KAKSLFNTTSV  176 (253)
T ss_dssp             -TCSEEEECSST
T ss_pred             -CCCEEEECCCC
Confidence             68999998754

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.11  E-value=0.01  Score=48.93  Aligned_cols=145  Identities=14%  Similarity=0.094  Sum_probs=83.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++|.|+|+ |.+|..++..|+..|.  .|+++|++++.++....++...    +..+.+. .|  +.+.          
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~~a----------   71 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EYSD----------   71 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CGGG----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CHHH----------
Confidence            468999998 9999999999999884  7999999987666544443321    1222222 22  2222          


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc--------CCCCCC
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY--------QPQSSM  157 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~--------~~~~~~  157 (255)
                       +..-|++|..+|.....    ..+..   ..+..|..-...+.+.+.++ .+++.++++|-....        .+.+..
T Consensus        72 -~~~aDvVvi~ag~~~~~----g~~r~---dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~k~~~~p~~  142 (317)
T 3d0o_A           72 -CHDADLVVICAGAAQKP----GETRL---DLVSKNLKIFKSIVGEVMAS-KFDGIFLVATNPVDILAYATWKFSGLPKE  142 (317)
T ss_dssp             -GTTCSEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHHHHHHHHHHHHCCCGG
T ss_pred             -hCCCCEEEECCCCCCCC----CCcHH---HHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCcHHHHHHHHHHHhCCCHH
Confidence             33789999999974321    23322   33455555555555555554 466777776543221        123333


Q ss_pred             hhhHh-hHHHHHHHHHHHHHHhC
Q 025273          158 AMYGV-TKTALLGLTKALAAEMA  179 (255)
Q Consensus       158 ~~y~~-sK~a~~~l~~~la~e~~  179 (255)
                      ..++. .-.-...+-+.++..++
T Consensus       143 rviG~gt~lD~~r~~~~la~~l~  165 (317)
T 3d0o_A          143 RVIGSGTILDSARFRLLLSEAFD  165 (317)
T ss_dssp             GEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HEEecCccccHHHHHHHHHHHhC
Confidence            33344 22223455556666653

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=97.10  E-value=0.0031  Score=52.56  Aligned_cols=104  Identities=13%  Similarity=0.068  Sum_probs=66.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ..|++|||+|+ |++|...++.+...|+. ++++++++++++.+ ++   .+....+   |-++.+ ..+..+.+. ..+
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~---lGa~~~i---~~~~~~-~~~~~~~~~-~~~  228 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KS---FGAMQTF---NSSEMS-APQMQSVLR-ELR  228 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HH---TTCSEEE---ETTTSC-HHHHHHHHG-GGC
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HH---cCCeEEE---eCCCCC-HHHHHHhhc-ccC
Confidence            45899999987 89999999988899987 56778887765533 22   3444332   444322 222233222 234


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      ..|.++.++|...                          ..+..+..++++++++.++...
T Consensus       229 g~d~v~d~~G~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  263 (346)
T 4a2c_A          229 FNQLILETAGVPQ--------------------------TVELAVEIAGPHAQLALVGTLH  263 (346)
T ss_dssp             SSEEEEECSCSHH--------------------------HHHHHHHHCCTTCEEEECCCCS
T ss_pred             Ccccccccccccc--------------------------hhhhhhheecCCeEEEEEeccC
Confidence            6899999887411                          1233456677889999887654

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=97.10  E-value=0.0013  Score=57.05  Aligned_cols=82  Identities=23%  Similarity=0.250  Sum_probs=54.6

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |++.+++++|+++|.|. |+.|.++|+.|+++|++|.+.|++........+.+.+.+.++..   .-. .++   .    
T Consensus         1 m~~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~---g~~-~~~---~----   68 (451)
T 3lk7_A            1 MKTITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVC---GSH-PLE---L----   68 (451)
T ss_dssp             ---CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEE---SCC-CGG---G----
T ss_pred             CcchhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEE---CCC-hHH---h----
Confidence            45556788999999998 78999999999999999999999754222334455555554432   111 111   1    


Q ss_pred             HHHhCC-CCEEEEcCCCC
Q 025273           84 IEKFGK-IDVVVSNAAAN  100 (255)
Q Consensus        84 ~~~~g~-~d~lv~~ag~~  100 (255)
                         +.. .|.+|.+.|+.
T Consensus        69 ---~~~~~d~vv~spgi~   83 (451)
T 3lk7_A           69 ---LDEDFCYMIKNPGIP   83 (451)
T ss_dssp             ---GGSCEEEEEECTTSC
T ss_pred             ---hcCCCCEEEECCcCC
Confidence               113 79999998874

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=97.09  E-value=0.0023  Score=51.10  Aligned_cols=106  Identities=12%  Similarity=0.065  Sum_probs=72.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh------------------cCCeEEEEEecCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA------------------RGIEVIGVVCHVSN   72 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~~Dv~~   72 (255)
                      ++.+||..|++.|.   .+..|+++|++|+.++.++..++...+....                  ...++.++++|+.+
T Consensus        68 ~~~~vLD~GCG~G~---~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~  144 (252)
T 2gb4_A           68 SGLRVFFPLCGKAI---EMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD  144 (252)
T ss_dssp             CSCEEEETTCTTCT---HHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred             CCCeEEEeCCCCcH---HHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence            57899999998773   3567888999999999999988876555421                  23578999999987


Q ss_pred             HHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           73 GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        73 ~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ...-         ..+.+|+++.+.....       .+.++.           -.+++.+...++++|+++.++
T Consensus       145 l~~~---------~~~~FD~V~~~~~l~~-------l~~~~~-----------~~~l~~~~~~LkpGG~l~l~~  191 (252)
T 2gb4_A          145 LPRA---------NIGKFDRIWDRGALVA-------INPGDH-----------DRYADIILSLLRKEFQYLVAV  191 (252)
T ss_dssp             GGGG---------CCCCEEEEEESSSTTT-------SCGGGH-----------HHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCcc---------cCCCEEEEEEhhhhhh-------CCHHHH-----------HHHHHHHHHHcCCCeEEEEEE
Confidence            5420         1147999997754432       112111           224556677888889886554

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.07  E-value=0.015  Score=48.10  Aligned_cols=113  Identities=18%  Similarity=0.156  Sum_probs=72.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      .+++.|+|+ |.+|.+++..|+..|. .|++.|++++.++....++...      ..++..  .+  +.+          
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~--t~--d~~----------   69 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG--TN--DYK----------   69 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE--ES--CGG----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE--cC--CHH----------
Confidence            467889995 9999999999999987 8999999998877655555432      122221  11  121          


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                       .+..-|++|..+|.....    ..+..   +.+..|..-...+.+.+..+- +.+.++++|-.
T Consensus        70 -a~~~aDvVIi~ag~p~k~----G~~R~---dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNP  124 (321)
T 3p7m_A           70 -DLENSDVVIVTAGVPRKP----GMSRD---DLLGINIKVMQTVGEGIKHNC-PNAFVICITNP  124 (321)
T ss_dssp             -GGTTCSEEEECCSCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred             -HHCCCCEEEEcCCcCCCC----CCCHH---HHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCc
Confidence             133789999999974321    23332   345556655555555555443 56677777643

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=97.07  E-value=0.0011  Score=55.74  Aligned_cols=47  Identities=23%  Similarity=0.355  Sum_probs=41.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (255)
                      +++||+|+|.|. |.+|+.+++.|.+.|++|++.+++.++++.+.+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            589999999986 88999999999999999999999988777666654

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.03  E-value=0.0058  Score=50.71  Aligned_cols=117  Identities=10%  Similarity=0.085  Sum_probs=75.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      .+.++|.|+|+ |.+|.+++..|+.+|.  .|+++|++.+.++....++...   ......+..+  +.+          
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~----------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS----------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH----------
Confidence            45688999997 9999999999999987  7999999988877776666543   1111122121  221          


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                       .+..-|++|..+|...+    ..++..   +.++.|.-=...+.+.+.++ .+.+.++++|-.
T Consensus        84 -~~~~aDiVvi~aG~~~k----pG~tR~---dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNP  138 (331)
T 4aj2_A           84 -VTANSKLVIITAGARQQ----EGESRL---NLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNP  138 (331)
T ss_dssp             -GGTTEEEEEECCSCCCC----TTCCGG---GGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred             -HhCCCCEEEEccCCCCC----CCccHH---HHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCh
Confidence             13378999999997542    122322   23455554444555555544 456788888754

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.02  E-value=0.012  Score=47.77  Aligned_cols=42  Identities=19%  Similarity=0.182  Sum_probs=36.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK   55 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (255)
                      ++|.|.|+ |.+|..+++.|++.|++|++.+|+++.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            67788875 8899999999999999999999999887776654

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.01  E-value=0.013  Score=48.34  Aligned_cols=114  Identities=14%  Similarity=0.107  Sum_probs=69.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +++.|+|+ |.+|..++..|+..|.  .|+++|++++.++....++...    +....+...|.  .           +.
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~-----------~a   66 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--Y-----------GP   66 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--S-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--H-----------HH
Confidence            36889996 9999999999999987  7999999998777555444431    11222221221  1           12


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      +..-|++|.++|.....    ..+   -.+.+..|..-...+.+.+..+ .+.+.++++|-.
T Consensus        67 ~~~aDvVii~ag~~~kp----G~~---R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNP  120 (314)
T 3nep_X           67 TEDSDVCIITAGLPRSP----GMS---RDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANP  120 (314)
T ss_dssp             GTTCSEEEECCCC--------------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSS
T ss_pred             hCCCCEEEECCCCCCCC----CCC---HHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCc
Confidence            34789999999974321    122   2234555655444555555443 356777777743

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.01  E-value=0.019  Score=47.59  Aligned_cols=74  Identities=19%  Similarity=0.150  Sum_probs=51.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      .++|.|.|+ |.+|..++..|+..|. .|++.|++++.++.....+...      ..++... .|   .+.         
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~~a---------   79 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN---YEY---------   79 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GGG---------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC---HHH---------
Confidence            368999998 9999999999999998 8999999988777543333221      2233321 12   111         


Q ss_pred             HHhCCCCEEEEcCCCCC
Q 025273           85 EKFGKIDVVVSNAAANP  101 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~  101 (255)
                        +..-|++|..+|...
T Consensus        80 --l~~aD~VI~avg~p~   94 (328)
T 2hjr_A           80 --LQNSDVVIITAGVPR   94 (328)
T ss_dssp             --GTTCSEEEECCSCCC
T ss_pred             --HCCCCEEEEcCCCCC
Confidence              237899999998643

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.01  E-value=0.012  Score=48.79  Aligned_cols=148  Identities=11%  Similarity=0.054  Sum_probs=85.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      +-+.++|.|+|+ |.+|..++..|+..+.  .|++.|++.++++....++....   ..+.+. .|  +.+.        
T Consensus         6 ~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~a--------   73 (326)
T 2zqz_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYSD--------   73 (326)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG--------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHHH--------
Confidence            334578999999 9999999999998875  69999999888777666664431   222222 22  2222        


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc--------CCCC
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY--------QPQS  155 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~--------~~~~  155 (255)
                         +..-|++|..+|.....    ..+..   ..+..|.--...+.+.+..+ .+.+.++++|-....        .+.+
T Consensus        74 ---~~~aDvVii~ag~~~k~----g~~R~---dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~~~t~~~~k~s~~p  142 (326)
T 2zqz_A           74 ---AKDADLVVITAGAPQKP----GETRL---DLVNKNLKILKSIVDPIVDS-GFNGIFLVAANPVDILTYATWKLSGFP  142 (326)
T ss_dssp             ---GGGCSEEEECCCCC---------CHH---HHHHHHHHHHHHHHHHHHHH-TCCSEEEECSSSHHHHHHHHHHHHCCC
T ss_pred             ---hCCCCEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHHHcCCC
Confidence               23689999999974321    22322   33455555444454544443 366788887643321        1233


Q ss_pred             CChhhHh-hHHHHHHHHHHHHHHhC
Q 025273          156 SMAMYGV-TKTALLGLTKALAAEMA  179 (255)
Q Consensus       156 ~~~~y~~-sK~a~~~l~~~la~e~~  179 (255)
                      ....++. .-.-...+-+.++..++
T Consensus       143 ~~rviG~gt~LD~~R~~~~la~~lg  167 (326)
T 2zqz_A          143 KNRVVGSGTSLDTARFRQSIAEMVN  167 (326)
T ss_dssp             GGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HHHEEEccccchHHHHHHHHHHHhC
Confidence            3333344 22223455556666663

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.00  E-value=0.0014  Score=55.13  Aligned_cols=81  Identities=16%  Similarity=0.272  Sum_probs=59.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc-------------------hhHHHHHHHHHhc--CCeEEEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ-------------------KNVDEAVVKLKAR--GIEVIGV   66 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~-------------------~~~~~~~~~~~~~--~~~~~~~   66 (255)
                      .+++++|+|.|+ ||+|.++++.|++.|.. +.++|++.                   .+.+.+++.+...  ..++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            467899999987 88999999999999974 99998763                   3455566666554  3467777


Q ss_pred             EecCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           67 VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      ..+++....+..        +...|++|.+..
T Consensus       194 ~~~i~~~~~~~~--------~~~~DlVvd~~D  217 (353)
T 3h5n_A          194 ALNINDYTDLHK--------VPEADIWVVSAD  217 (353)
T ss_dssp             ECCCCSGGGGGG--------SCCCSEEEECCC
T ss_pred             ecccCchhhhhH--------hccCCEEEEecC
Confidence            777776553322        347899998754

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.97  E-value=0.0013  Score=53.57  Aligned_cols=95  Identities=15%  Similarity=0.165  Sum_probs=65.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+.||++.|.| -|.||+.+++.|...|++|+..+|+....+.           +.    ..   ++++++++      
T Consensus       118 ~~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----------~~----~~---~~l~ell~------  172 (290)
T 3gvx_A          118 TLLYGKALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----------DV----IS---ESPADLFR------  172 (290)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----------SE----EC---SSHHHHHH------
T ss_pred             eeeecchheeec-cCchhHHHHHHHHhhCcEEEEEecccccccc-----------cc----cc---CChHHHhh------
Confidence            458899999997 5899999999999999999999998754221           00    11   23444444      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                       .-|+++.+.........+  .                   ....++.|+++..+|++|...
T Consensus       173 -~aDiV~l~~P~t~~t~~l--i-------------------~~~~l~~mk~gailIN~aRG~  212 (290)
T 3gvx_A          173 -QSDFVLIAIPLTDKTRGM--V-------------------NSRLLANARKNLTIVNVARAD  212 (290)
T ss_dssp             -HCSEEEECCCCCTTTTTC--B-------------------SHHHHTTCCTTCEEEECSCGG
T ss_pred             -ccCeEEEEeeccccchhh--h-------------------hHHHHhhhhcCceEEEeehhc
Confidence             479999887653321111  1                   133467888888999998654

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.95  E-value=0.0038  Score=55.67  Aligned_cols=90  Identities=11%  Similarity=0.136  Sum_probs=58.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc-------------------hhHHHHHHHHHhcC--CeEEEE
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ-------------------KNVDEAVVKLKARG--IEVIGV   66 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~   66 (255)
                      .+++.+|+|.|+ ||+|.++++.|++.|.. +.++|++.                   .+.+.+++.+.+..  .++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            367889999986 69999999999999975 99998764                   45666677776654  455555


Q ss_pred             EecC-------CCHHHHHHHHHHHHHHhCCCCEEEEcCCC
Q 025273           67 VCHV-------SNGQQRKNLINQTIEKFGKIDVVVSNAAA   99 (255)
Q Consensus        67 ~~Dv-------~~~~~v~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      ..++       ++++....-.+.+.+.+...|+||++..-
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn  441 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS  441 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence            5544       22221111112222223468999988653

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.95  E-value=0.022  Score=46.74  Aligned_cols=143  Identities=14%  Similarity=0.129  Sum_probs=78.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ++|.|+|+ |.+|..++..|+..|. .|+++|++++.++....++...      ..++... .|   .+.          
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~~a----------   67 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NN---YAD----------   67 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SC---GGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CC---HHH----------
Confidence            57999998 9999999999999996 8999999988777655555431      2223221 12   111          


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc--------CCCCCC
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY--------QPQSSM  157 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~--------~~~~~~  157 (255)
                       +...|++|.++|.....    ..+.   ...+..|..-...+.+.+.++- +.+.++++|-....        .+.++.
T Consensus        68 -~~~aD~Vi~a~g~p~~~----g~~r---~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNPv~~~t~~~~~~~~~~~~  138 (309)
T 1ur5_A           68 -TANSDVIVVTSGAPRKP----GMSR---EDLIKVNADITRACISQAAPLS-PNAVIIMVNNPLDAMTYLAAEVSGFPKE  138 (309)
T ss_dssp             -GTTCSEEEECCCC---------------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCSSHHHHHHHHHHHHCCCGG
T ss_pred             -HCCCCEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCCchHHHHHHHHHHcCCCHH
Confidence             23789999999874321    1111   1224445444444555554442 44555555432211        112233


Q ss_pred             hhhHh-hHHHHHHHHHHHHHHhC
Q 025273          158 AMYGV-TKTALLGLTKALAAEMA  179 (255)
Q Consensus       158 ~~y~~-sK~a~~~l~~~la~e~~  179 (255)
                      ...|. .-.-...+-+.++..++
T Consensus       139 rviG~gt~LD~~r~~~~la~~lg  161 (309)
T 1ur5_A          139 RVIGQAGVLDAARYRTFIAMEAG  161 (309)
T ss_dssp             GEEECCHHHHHHHHHHHHHHHHT
T ss_pred             HEEECCcchHHHHHHHHHHHHhC
Confidence            33444 22224555666666664

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.92  E-value=0.0035  Score=51.84  Aligned_cols=145  Identities=12%  Similarity=0.060  Sum_probs=81.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++|.|+|+ |.+|..++..|+..|.  .|+++|+++++++....++....   ..+.+. .  .+.           +.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~-----------~a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDY-----------SD   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCH-----------HH
Confidence            457999998 9999999999999987  79999999876665555554321   122211 1  111           12


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc--------CCCCCCh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY--------QPQSSMA  158 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~--------~~~~~~~  158 (255)
                      +..-|++|..+|....    ...+.   .+.+..|+.-...+.+.+.++ .+++.++++|-....        .+.+...
T Consensus        72 ~~~aDvVii~~g~p~k----~g~~r---~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~k~s~~p~~r  143 (318)
T 1y6j_A           72 VKDCDVIVVTAGANRK----PGETR---LDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSNPVDIITYMIQKWSGLPVGK  143 (318)
T ss_dssp             GTTCSEEEECCCC----------CH---HHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSSSHHHHHHHHHHHHTCCTTT
T ss_pred             hCCCCEEEEcCCCCCC----CCcCH---HHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecCcHHHHHHHHHHHcCCCHHH
Confidence            3478999999986431    12222   234566666556666666555 356677776433221        1233333


Q ss_pred             hhHh-hHHHHHHHHHHHHHHhC
Q 025273          159 MYGV-TKTALLGLTKALAAEMA  179 (255)
Q Consensus       159 ~y~~-sK~a~~~l~~~la~e~~  179 (255)
                      ..+. .-.-...+-+.++..++
T Consensus       144 viG~gt~Ld~~r~~~~la~~lg  165 (318)
T 1y6j_A          144 VIGSGTVLDSIRFRYLLSEKLG  165 (318)
T ss_dssp             EEECTTHHHHHHHHHHHHTTTT
T ss_pred             EeccCCchHHHHHHHHHHHHhC
Confidence            3444 33334455556666653

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.89  E-value=0.0017  Score=54.15  Aligned_cols=101  Identities=16%  Similarity=0.159  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ..|.+|||.|+ |++|...+.+++.. |++|+++++++++++..+    ..+....+   |-++.+-.+    ++.+..+
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~----~~Ga~~~i---~~~~~~~~~----~v~~~t~  229 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK----KIGADVTI---NSGDVNPVD----EIKKITG  229 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH----HTTCSEEE---EC-CCCHHH----HHHHHTT
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh----hcCCeEEE---eCCCCCHHH----HhhhhcC
Confidence            35889999987 78888888888766 788999999987654332    22433332   444443333    3333332


Q ss_pred             --CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           89 --KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        89 --~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                        .+|.++.+++..           +               .....+..++++|+++.++..
T Consensus       230 g~g~d~~~~~~~~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  265 (348)
T 4eez_A          230 GLGVQSAIVCAVAR-----------I---------------AFEQAVASLKPMGKMVAVAVP  265 (348)
T ss_dssp             SSCEEEEEECCSCH-----------H---------------HHHHHHHTEEEEEEEEECCCC
T ss_pred             CCCceEEEEeccCc-----------c---------------hhheeheeecCCceEEEEecc
Confidence              577888877631           1               123345667788898887654

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.86  E-value=0.0037  Score=51.32  Aligned_cols=112  Identities=15%  Similarity=0.096  Sum_probs=64.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++|.|+|+ |.+|..++..|+..|.  .|++.|++++.++....++....   ....+.. +  +.+.           +
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~--~~~a-----------~   65 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH-G--GHSE-----------L   65 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE-E--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE-C--CHHH-----------h
Confidence            36889998 9999999999999998  89999999876665444443221   1111111 1  2211           2


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      ...|++|.+++.....    ..+   ..+.+..|+.-...+.+.+.++ .+++.++++|-
T Consensus        66 ~~aDvVIi~~~~~~~~----g~~---r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tN  117 (304)
T 2v6b_A           66 ADAQVVILTAGANQKP----GES---RLDLLEKNADIFRELVPQITRA-APDAVLLVTSN  117 (304)
T ss_dssp             TTCSEEEECC-------------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSS
T ss_pred             CCCCEEEEcCCCCCCC----CCc---HHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecC
Confidence            3789999999864321    111   1223455555555555555554 35566666553

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.85  E-value=0.0042  Score=51.33  Aligned_cols=89  Identities=15%  Similarity=0.137  Sum_probs=57.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH-------HHhcCCeEEEEEecCCCHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-------LKARGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      +.+.+++.|.|. |.+|..+++.|++.|+.|++.+|+++..+.+.+.       ..+.-....++..=+.+...++.++.
T Consensus        28 ~~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~  106 (320)
T 4dll_A           28 DPYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLF  106 (320)
T ss_dssp             -CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHT
T ss_pred             ccCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHc
Confidence            345678888865 8999999999999999999999998877665432       00000112223334455667777765


Q ss_pred             --HHHHHhCCCCEEEEcCC
Q 025273           82 --QTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        82 --~~~~~~g~~d~lv~~ag   98 (255)
                        .+.....+-.++|+...
T Consensus       107 ~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          107 AQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TTCHHHHCCTTCEEEECSC
T ss_pred             chhHHhhCCCCCEEEecCC
Confidence              55555544566776654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.83  E-value=0.03  Score=46.07  Aligned_cols=148  Identities=16%  Similarity=0.119  Sum_probs=84.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc-C--CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLE-G--ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++|.|+||+|.+|.+++..|+.. +  ..++++|+++ ..+....++........+...--++..          +.+..
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~----------~~~~~   69 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDAT----------PALEG   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCH----------HHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcH----------HHhCC
Confidence            36899999999999999999876 5  4699999987 444444455443222222111001111          11237


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc-----------cCCC-CCC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG-----------YQPQ-SSM  157 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~-----------~~~~-~~~  157 (255)
                      .|++|..+|....    ..++.   .+.++.|..-...+.+.+.++ .+.+.++++|-...           ..+. +..
T Consensus        70 aDivii~ag~~rk----pG~~R---~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPvd~~t~~a~~~~k~sg~~p~~  141 (312)
T 3hhp_A           70 ADVVLISAGVARK----PGMDR---SDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNPVNTTVAIAAEVLKKAGVYDKN  141 (312)
T ss_dssp             CSEEEECCSCSCC----TTCCH---HHHHHHHHHHHHHHHHHHHHH-CTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTT
T ss_pred             CCEEEEeCCCCCC----CCCCH---HHHHHHHHHHHHHHHHHHHHH-CCCcEEEEecCcchhHHHHHHHHHHHcCCCCcc
Confidence            8999999996432    22333   334556665555555555554 35667777764321           1122 344


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhC
Q 025273          158 AMYGVTKTALLGLTKALAAEMA  179 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~  179 (255)
                      ...+.+-.=...+-..++..++
T Consensus       142 rv~G~~~LD~~R~~~~la~~lg  163 (312)
T 3hhp_A          142 KLFGVTTLDIIRSNTFVAELKG  163 (312)
T ss_dssp             SEEECCHHHHHHHHHHHHHHHT
T ss_pred             eEEEEechhHHHHHHHHHHHhC
Confidence            4455552223445566666663

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.82  E-value=0.0012  Score=54.73  Aligned_cols=98  Identities=19%  Similarity=0.191  Sum_probs=64.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      +|||+||+|++|..+++.+...|++|+++++++++++.++ ++   +....   .|..+.+  .+.++++  ..+.+|++
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l---Ga~~v---~~~~~~~--~~~~~~~--~~~~~d~v  221 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QL---GASEV---ISREDVY--DGTLKAL--SKQQWQGA  221 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HH---TCSEE---EEHHHHC--SSCCCSS--CCCCEEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcEE---EECCCch--HHHHHHh--hcCCccEE
Confidence            7999999999999999999899999999999987766543 33   33222   2321110  0001111  01368999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      |+++|. .                          ..+..++.++++|+++.++...
T Consensus       222 id~~g~-~--------------------------~~~~~~~~l~~~G~iv~~G~~~  250 (330)
T 1tt7_A          222 VDPVGG-K--------------------------QLASLLSKIQYGGSVAVSGLTG  250 (330)
T ss_dssp             EESCCT-H--------------------------HHHHHHTTEEEEEEEEECCCSS
T ss_pred             EECCcH-H--------------------------HHHHHHHhhcCCCEEEEEecCC
Confidence            999873 1                          1234456778889999887543

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.82  E-value=0.0049  Score=49.38  Aligned_cols=88  Identities=15%  Similarity=0.147  Sum_probs=57.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHH--------hcCCeEEEEEecCCCHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLK--------ARGIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      +.++++.|.|+ |.+|..+++.|++.|+. |.+.+|+++..+.+.+.+.        +.-....++..= .....+.+++
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a-v~~~~~~~v~   85 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS-LKDSAFAELL   85 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC-CCHHHHHHHH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe-cCHHHHHHHH
Confidence            44567899996 99999999999999998 8899999888777655421        000111111111 2344667777


Q ss_pred             HHHHHHhCCCCEEEEcCCC
Q 025273           81 NQTIEKFGKIDVVVSNAAA   99 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~   99 (255)
                      +++...+++=.++|++...
T Consensus        86 ~~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTT
T ss_pred             HHHHhhcCCCcEEEECCCC
Confidence            7765444333467777654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.82  E-value=0.0021  Score=55.17  Aligned_cols=74  Identities=14%  Similarity=0.108  Sum_probs=54.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +..|+|.|. |-+|+.+++.|.++|+.|++++++++..+.+.+    .+  +.++..|.++++.++++      ...+.|
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g--~~vi~GDat~~~~L~~a------gi~~A~   70 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG--MKVFYGDATRMDLLESA------GAAKAE   70 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT--CCCEESCTTCHHHHHHT------TTTTCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC--CeEEEcCCCCHHHHHhc------CCCccC
Confidence            356899997 779999999999999999999999887665432    22  34566788887766554      112567


Q ss_pred             EEEEcCC
Q 025273           92 VVVSNAA   98 (255)
Q Consensus        92 ~lv~~ag   98 (255)
                      ++|.+.+
T Consensus        71 ~viv~~~   77 (413)
T 3l9w_A           71 VLINAID   77 (413)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            7776654

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.82  E-value=0.0048  Score=51.27  Aligned_cols=42  Identities=19%  Similarity=0.165  Sum_probs=37.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD   50 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~   50 (255)
                      ..+.|+++.|.|. |.||+.+++.|+..|++|++.+|+.+..+
T Consensus       151 ~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~  192 (330)
T 2gcg_A          151 YGLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPE  192 (330)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHH
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchh
Confidence            4588999999986 99999999999999999999999876544

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.81  E-value=0.0051  Score=51.69  Aligned_cols=42  Identities=19%  Similarity=0.145  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV   53 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   53 (255)
                      +.+++.|.| .|.+|..+++.|++.|+.|++.+|+++..+.+.
T Consensus        21 ~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~   62 (358)
T 4e21_A           21 QSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALE   62 (358)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            467888887 689999999999999999999999987766543

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=96.79  E-value=0.024  Score=43.47  Aligned_cols=98  Identities=11%  Similarity=0.184  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCC--eEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++||-.|++.|.   ++..|++.+.+|+.++.+++.++..++.+...+.  ++.++..|+.+.-          ...+
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------~~~~  121 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL----------ADLP  121 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG----------TTSC
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc----------ccCC
Confidence            46899999987652   3445555689999999999988888777766542  6999999987521          1124


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      .+|.++.+.+.          .              .- +++.+.+.++++|++++..
T Consensus       122 ~~D~v~~~~~~----------~--------------~~-~l~~~~~~LkpgG~lv~~~  154 (204)
T 3njr_A          122 LPEAVFIGGGG----------S--------------QA-LYDRLWEWLAPGTRIVANA  154 (204)
T ss_dssp             CCSEEEECSCC----------C--------------HH-HHHHHHHHSCTTCEEEEEE
T ss_pred             CCCEEEECCcc----------c--------------HH-HHHHHHHhcCCCcEEEEEe
Confidence            78999976532          0              11 4555667788888888754

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.79  E-value=0.0019  Score=53.43  Aligned_cols=97  Identities=15%  Similarity=0.142  Sum_probs=65.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |+ |||+||+|++|...++.+...|++|+++++++++.+.+++ +   +....+   |-.+.+.    ++++  ..+.+|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~vi---~~~~~~~----~~~~--~~~~~d  213 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L---GANRIL---SRDEFAE----SRPL--EKQLWA  213 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H---TCSEEE---EGGGSSC----CCSS--CCCCEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEEE---ecCCHHH----HHhh--cCCCcc
Confidence            45 9999999999999999999999999999999887765533 3   333322   2222111    1111  114689


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      +++.++|..                           ..+..++.++++|+++.++...
T Consensus       214 ~v~d~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~  244 (324)
T 3nx4_A          214 GAIDTVGDK---------------------------VLAKVLAQMNYGGCVAACGLAG  244 (324)
T ss_dssp             EEEESSCHH---------------------------HHHHHHHTEEEEEEEEECCCTT
T ss_pred             EEEECCCcH---------------------------HHHHHHHHHhcCCEEEEEecCC
Confidence            999887620                           2344567788889999997654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.78  E-value=0.0029  Score=53.91  Aligned_cols=115  Identities=16%  Similarity=0.177  Sum_probs=69.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      .|.+|||.|+ |++|...++.+...|+ +|+++++++++++.++    +.+..  .  .|.++.+.+.   +++.+.. +
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~----~lGa~--~--i~~~~~~~~~---~~v~~~t~g  252 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----AQGFE--I--ADLSLDTPLH---EQIAALLGE  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCE--E--EETTSSSCHH---HHHHHHHSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH----HcCCc--E--EccCCcchHH---HHHHHHhCC
Confidence            5789999995 9999999988888899 6899999987765442    23443  2  3554433222   2333322 2


Q ss_pred             -CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           89 -KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                       .+|++|.++|........ +..          |...+-..++..++.++++|+++.++..
T Consensus       253 ~g~Dvvid~~G~~~~~~~~-~~~----------~~~~~~~~~~~~~~~l~~~G~iv~~G~~  302 (398)
T 1kol_A          253 PEVDCAVDAVGFEARGHGH-EGA----------KHEAPATVLNSLMQVTRVAGKIGIPGLY  302 (398)
T ss_dssp             SCEEEEEECCCTTCBCSST-TGG----------GSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred             CCCCEEEECCCCccccccc-ccc----------cccchHHHHHHHHHHHhcCCEEEEeccc
Confidence             699999999853200000 000          0000111234456777888999988754

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.76  E-value=0.00078  Score=62.68  Aligned_cols=98  Identities=16%  Similarity=0.237  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C-
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G-   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g-   88 (255)
                      .|.+|||.||+|++|.+.++.....|++|++++++. +.+.+.     .+....   .|-.+.+    +.+++.+.. | 
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~-----lga~~v---~~~~~~~----~~~~i~~~t~g~  411 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVE-----LSREHL---ASSRTCD----FEQQFLGATGGR  411 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSC-----SCGGGE---ECSSSST----HHHHHHHHSCSS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh-----cChhhe---eecCChh----HHHHHHHHcCCC
Confidence            588999999999999999998888999999998765 222111     222211   2333332    233344433 2 


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      .+|+++++.|...                           ++..++.++++|++|.++..
T Consensus       412 GvDvVld~~gg~~---------------------------~~~~l~~l~~~Gr~v~iG~~  444 (795)
T 3slk_A          412 GVDVVLNSLAGEF---------------------------ADASLRMLPRGGRFLELGKT  444 (795)
T ss_dssp             CCSEEEECCCTTT---------------------------THHHHTSCTTCEEEEECCST
T ss_pred             CeEEEEECCCcHH---------------------------HHHHHHHhcCCCEEEEeccc
Confidence            6999999876311                           12345677888999988753

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.76  E-value=0.0042  Score=49.29  Aligned_cols=77  Identities=12%  Similarity=0.081  Sum_probs=55.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           14 VAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      +|.|.|++|.+|+.+++.+.+. +++|+.+....+.++.+..    ....   +..|.|.++.+.+.+..+.+.  ++++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~~--g~~~   72 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHA   72 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHHT--TCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc---EEEEccChHHHHHHHHHHHHc--CCCE
Confidence            6899999999999999999876 8887654433333333221    1222   567999999988888877665  6888


Q ss_pred             EEEcCCC
Q 025273           93 VVSNAAA   99 (255)
Q Consensus        93 lv~~ag~   99 (255)
                      ++-..|+
T Consensus        73 VigTTG~   79 (245)
T 1p9l_A           73 VVGTTGF   79 (245)
T ss_dssp             EECCCCC
T ss_pred             EEcCCCC
Confidence            9877764

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.73  E-value=0.06  Score=44.16  Aligned_cols=110  Identities=15%  Similarity=0.145  Sum_probs=69.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ++.|.|+ |.+|..++..|++.  |..|++.+++++.++....++...      ..++...    ++.++          
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~~----------   66 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS----NDYAD----------   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE----SCGGG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC----CCHHH----------
Confidence            6889998 99999999999985  788999999988777654333321      1222211    12211          


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       +...|++|.+++....    ...+.   ...+..|+.-...+.+.+.++. +.+.+++++-
T Consensus        67 -l~~aDvViiav~~p~~----~g~~r---~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tN  119 (310)
T 1guz_A           67 -TANSDIVIITAGLPRK----PGMTR---EDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSN  119 (310)
T ss_dssp             -GTTCSEEEECCSCCCC----TTCCH---HHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCS
T ss_pred             -HCCCCEEEEeCCCCCC----CCCCH---HHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcC
Confidence             2378999999985321    12222   2344556655556666666553 5667777754

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.73  E-value=0.0035  Score=53.80  Aligned_cols=40  Identities=33%  Similarity=0.356  Sum_probs=35.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~   48 (255)
                      ..+.||+++|.|. |.||+.+++.+...|++|+++++++..
T Consensus       243 ~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~  282 (464)
T 3n58_A          243 VMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPIC  282 (464)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence            3588999999995 569999999999999999999998654

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.71  E-value=0.021  Score=47.17  Aligned_cols=144  Identities=12%  Similarity=0.069  Sum_probs=82.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++|.|+|+ |.+|..++..|+..+.  .|++.|+++++++....++....   ..+.+. .|  +.+           .+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~~-----------a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EYS-----------DC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CHH-----------Hh
Confidence            67999998 9999999999998886  79999999888877666665431   222222 22  111           13


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc--------CCCCCChh
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY--------QPQSSMAM  159 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~--------~~~~~~~~  159 (255)
                      ..-|++|..+|.....    ..+   -.+.+..|.--...+.+.+.++ .+.+.++++|-....        .+.+....
T Consensus        71 ~~aDvVii~ag~~~~~----g~~---R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rv  142 (318)
T 1ez4_A           71 KDADLVVITAGAPQKP----GES---RLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANPVDILTYATWKFSGFPKERV  142 (318)
T ss_dssp             TTCSEEEECCCC-----------------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHHHHHHHHHHHHCCCGGGE
T ss_pred             CCCCEEEECCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHHHcCCCHHHE
Confidence            4789999999974321    111   1223455555444455544444 366788887643321        12333333


Q ss_pred             hHh-hHHHHHHHHHHHHHHhC
Q 025273          160 YGV-TKTALLGLTKALAAEMA  179 (255)
Q Consensus       160 y~~-sK~a~~~l~~~la~e~~  179 (255)
                      ++. .-.-...+-+.++..++
T Consensus       143 iG~gt~LD~~R~~~~la~~lg  163 (318)
T 1ez4_A          143 IGSGTSLDSSRLRVALGKQFN  163 (318)
T ss_dssp             EECTTHHHHHHHHHHHHHHHT
T ss_pred             EeccccchHHHHHHHHHHHhC
Confidence            344 22233455556666663

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.71  E-value=0.0018  Score=56.38  Aligned_cols=74  Identities=18%  Similarity=0.149  Sum_probs=56.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      .++++|.|+ |-+|+.+++.|.++|+.|++++++++.++.+.+.+     .+.++..|-++++-++++=      ..+-|
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Ag------i~~ad   70 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAG------AQDAD   70 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHT------TTTCS
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcC------CCcCC
Confidence            356888887 68999999999999999999999998877765543     4567788999888776651      12567


Q ss_pred             EEEEcC
Q 025273           92 VVVSNA   97 (255)
Q Consensus        92 ~lv~~a   97 (255)
                      .+|-..
T Consensus        71 ~~ia~t   76 (461)
T 4g65_A           71 MLVAVT   76 (461)
T ss_dssp             EEEECC
T ss_pred             EEEEEc
Confidence            777543

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=96.71  E-value=0.0027  Score=53.15  Aligned_cols=99  Identities=12%  Similarity=0.160  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|.+|||+|++|++|...++.+...| ..|+.+++ .++.+.++     .+....   .| .+.+ ..+.+.++.  -+.
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~-~~~~~~~~-----~ga~~~---~~-~~~~-~~~~~~~~~--~~g  208 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS-TFKHEAIK-----DSVTHL---FD-RNAD-YVQEVKRIS--AEG  208 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEEC-GGGHHHHG-----GGSSEE---EE-TTSC-HHHHHHHHC--TTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCC-HHHHHHHH-----cCCcEE---Ec-CCcc-HHHHHHHhc--CCC
Confidence            58999999999999999888776665 67887774 34433322     222222   24 3222 222222221  247


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      +|+++.+.|...                           ++..+..++++|+++.++...
T Consensus       209 ~Dvv~d~~g~~~---------------------------~~~~~~~l~~~G~~v~~G~~~  241 (349)
T 4a27_A          209 VDIVLDCLCGDN---------------------------TGKGLSLLKPLGTYILYGSSN  241 (349)
T ss_dssp             EEEEEEECC----------------------------------CTTEEEEEEEEEEC---
T ss_pred             ceEEEECCCchh---------------------------HHHHHHHhhcCCEEEEECCCc
Confidence            999999988421                           123467788889999988643

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.69  E-value=0.004  Score=52.13  Aligned_cols=100  Identities=21%  Similarity=0.198  Sum_probs=66.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+.||++.|.|. |.||+++++.|...|++|+..+|+....+... +.   +..  .    +   ++++++++      
T Consensus       160 ~~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~---g~~--~----~---~~l~ell~------  219 (351)
T 3jtm_A          160 YDLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-ET---GAK--F----V---EDLNEMLP------  219 (351)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-HH---CCE--E----C---SCHHHHGG------
T ss_pred             ccccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-hC---CCe--E----c---CCHHHHHh------
Confidence            4589999999984 78999999999999999999999865444322 11   211  1    1   23344443      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                       ..|+++.+........  .-.+                   ...++.|+++..+|+++...
T Consensus       220 -~aDvV~l~~Plt~~t~--~li~-------------------~~~l~~mk~gailIN~aRG~  259 (351)
T 3jtm_A          220 -KCDVIVINMPLTEKTR--GMFN-------------------KELIGKLKKGVLIVNNARGA  259 (351)
T ss_dssp             -GCSEEEECSCCCTTTT--TCBS-------------------HHHHHHSCTTEEEEECSCGG
T ss_pred             -cCCEEEECCCCCHHHH--Hhhc-------------------HHHHhcCCCCCEEEECcCch
Confidence             6799998876543211  1111                   23456788888899988643

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.69  E-value=0.0052  Score=50.44  Aligned_cols=93  Identities=13%  Similarity=0.060  Sum_probs=58.3

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHH-------HhcCCeEEEEEecCCCHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-------KARGIEVIGVVCHVSNGQQR   76 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~v   76 (255)
                      |+|....+.+++.|.| .|.+|..+++.|++.|++|++.+|+++..+.+.+.-       .+.-....++..=+.+...+
T Consensus         1 m~m~~~~~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~   79 (306)
T 3l6d_A            1 MSLSDESFEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHAT   79 (306)
T ss_dssp             -CCCCCCCSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHH
T ss_pred             CCCCcccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHH
Confidence            5555555667788886 689999999999999999999999988777654320       00000112233344556666


Q ss_pred             HHHHH--HHHHHhCCCCEEEEcCC
Q 025273           77 KNLIN--QTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        77 ~~~~~--~~~~~~g~~d~lv~~ag   98 (255)
                      +.++.  .+.. ..+-.++|++..
T Consensus        80 ~~v~~~~~l~~-~~~g~ivid~st  102 (306)
T 3l6d_A           80 HEVLGMPGVAR-ALAHRTIVDYTT  102 (306)
T ss_dssp             HHHHTSTTHHH-HTTTCEEEECCC
T ss_pred             HHHhcccchhh-ccCCCEEEECCC
Confidence            76664  4432 333456666654

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.67  E-value=0.0032  Score=51.93  Aligned_cols=98  Identities=14%  Similarity=0.095  Sum_probs=65.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+.||++.|.|. |.||+++++.|...|++|+..+|+....+.         ... .     ....+++++++      
T Consensus       135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~---------~~~-~-----~~~~~l~ell~------  192 (315)
T 3pp8_A          135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWPG---------VES-Y-----VGREELRAFLN------  192 (315)
T ss_dssp             CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCTT---------CEE-E-----ESHHHHHHHHH------
T ss_pred             CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhhh---------hhh-h-----cccCCHHHHHh------
Confidence            4588999999985 899999999999999999999998654211         110 1     11245555554      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                       .-|+++.+.-......  .-.                   ....++.|+++..+|++|...
T Consensus       193 -~aDiV~l~~Plt~~t~--~li-------------------~~~~l~~mk~gailIN~aRG~  232 (315)
T 3pp8_A          193 -QTRVLINLLPNTAQTV--GII-------------------NSELLDQLPDGAYVLNLARGV  232 (315)
T ss_dssp             -TCSEEEECCCCCGGGT--TCB-------------------SHHHHTTSCTTEEEEECSCGG
T ss_pred             -hCCEEEEecCCchhhh--hhc-------------------cHHHHhhCCCCCEEEECCCCh
Confidence             6799988765432111  011                   123467788888888888543

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.67  E-value=0.016  Score=47.82  Aligned_cols=110  Identities=14%  Similarity=0.137  Sum_probs=67.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc-----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR-----GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +++.|.|+ |.+|..++..|++.|+  .|++.+++++.++.....+...     ..++.   .  ++.+.          
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~---~--~d~~~----------   64 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY---A--GDYAD----------   64 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE---E--CCGGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE---e--CCHHH----------
Confidence            36889998 9999999999999998  8999999988777655444321     11222   1  22222          


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       +...|++|.+++....    ...+..   ..+..|..-...+.+.+.++. +.+.+++++-
T Consensus        65 -~~~aDvViiav~~~~~----~g~~r~---dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tN  117 (319)
T 1a5z_A           65 -LKGSDVVIVAAGVPQK----PGETRL---QLLGRNARVMKEIARNVSKYA-PDSIVIVVTN  117 (319)
T ss_dssp             -GTTCSEEEECCCCCCC----SSCCHH---HHHHHHHHHHHHHHHHHHHHC-TTCEEEECSS
T ss_pred             -hCCCCEEEEccCCCCC----CCCCHH---HHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCC
Confidence             2368999999986432    112221   223444444444555554442 4566666653

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.66  E-value=0.0028  Score=51.14  Aligned_cols=39  Identities=28%  Similarity=0.319  Sum_probs=35.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      .+++||+++|.|.++-+|+.++..|+.+|++|.++.|+.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            358999999999999999999999999999999987754

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.66  E-value=0.0012  Score=54.43  Aligned_cols=82  Identities=21%  Similarity=0.117  Sum_probs=54.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++|++++|.|++.-+|+.+++.|+..|++|.+++|+...+....+++...  ......+..++++++++.+.       
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~--~~~~t~~~~t~~~~L~e~l~-------  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLN--KHHVEDLGEYSEDLLKKCSL-------  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCC--CCEEEEEEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhh--cccccccccccHhHHHHHhc-------
Confidence            689999999999989999999999999999999998843221111111100  00111111134466666655       


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .-|++|...|.
T Consensus       245 ~ADIVIsAtg~  255 (320)
T 1edz_A          245 DSDVVITGVPS  255 (320)
T ss_dssp             HCSEEEECCCC
T ss_pred             cCCEEEECCCC
Confidence            56999999885

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=96.66  E-value=0.0045  Score=52.93  Aligned_cols=39  Identities=26%  Similarity=0.295  Sum_probs=34.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~   48 (255)
                      .+.||+++|.|. |.||+.+++.|...|++|+++++++..
T Consensus       217 ~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~r  255 (435)
T 3gvp_A          217 MFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPIC  255 (435)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            478999999997 569999999999999999999998654

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.65  E-value=0.0041  Score=52.42  Aligned_cols=99  Identities=19%  Similarity=0.229  Sum_probs=65.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ..+.||++.|.|. |.||+++++.|...|++ |+..+|+....+.. .+   .+  +..    ..   +++++++     
T Consensus       160 ~~l~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~-~~---~g--~~~----~~---~l~ell~-----  220 (364)
T 2j6i_A          160 YDIEGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAE-EK---VG--ARR----VE---NIEELVA-----  220 (364)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHH-HH---TT--EEE----CS---SHHHHHH-----
T ss_pred             ccCCCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHH-Hh---cC--cEe----cC---CHHHHHh-----
Confidence            4689999999975 99999999999999997 99999887554422 11   12  111    11   2344443     


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                        ..|+++.+.........  -.                   ....++.|+++..+|+++..
T Consensus       221 --~aDvV~l~~P~t~~t~~--li-------------------~~~~l~~mk~ga~lIn~arG  259 (364)
T 2j6i_A          221 --QADIVTVNAPLHAGTKG--LI-------------------NKELLSKFKKGAWLVNTARG  259 (364)
T ss_dssp             --TCSEEEECCCCSTTTTT--CB-------------------CHHHHTTSCTTEEEEECSCG
T ss_pred             --cCCEEEECCCCChHHHH--Hh-------------------CHHHHhhCCCCCEEEECCCC
Confidence              67999988765431111  11                   12345778888888888864

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.62  E-value=0.013  Score=48.12  Aligned_cols=97  Identities=13%  Similarity=0.134  Sum_probs=64.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+.|+++.|.|. |.||+.+++.|...|++|+..+|+.+. +. ..   ..+.+  .     .+   ++++++      
T Consensus       138 ~~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~-~~---~~g~~--~-----~~---l~ell~------  195 (307)
T 1wwk_A          138 IELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ER-AK---EVNGK--F-----VD---LETLLK------  195 (307)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HH-HH---HTTCE--E-----CC---HHHHHH------
T ss_pred             cccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hh-Hh---hcCcc--c-----cC---HHHHHh------
Confidence            4588999999974 999999999999999999999998765 21 11   22221  1     12   334443      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                       ..|+++.+.........  -.+                   ...++.|+++..+|++|+.
T Consensus       196 -~aDvV~l~~p~~~~t~~--li~-------------------~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          196 -ESDVVTIHVPLVESTYH--LIN-------------------EERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             -HCSEEEECCCCSTTTTT--CBC-------------------HHHHHHSCTTCEEEECSCG
T ss_pred             -hCCEEEEecCCChHHhh--hcC-------------------HHHHhcCCCCeEEEECCCC
Confidence             47999988664331111  011                   2235667888899999874

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=96.60  E-value=0.0099  Score=47.61  Aligned_cols=105  Identities=13%  Similarity=0.138  Sum_probs=72.9

Q ss_pred             CCCEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQG-IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .|.+||=.|++.| +...+++.+...|++|+.+|.+++.++..++.+...  ..++.+++.|+.+.+            +
T Consensus        70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~------------~  137 (261)
T 4gek_A           70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA------------I  137 (261)
T ss_dssp             TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC------------C
T ss_pred             CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc------------c
Confidence            4788999998755 455666655566899999999999999888887665  357999999987632            2


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      ++.|+++.+...       ...++++..           .+++.+...|+++|.+++.
T Consensus       138 ~~~d~v~~~~~l-------~~~~~~~~~-----------~~l~~i~~~LkpGG~lii~  177 (261)
T 4gek_A          138 ENASMVVLNFTL-------QFLEPSERQ-----------ALLDKIYQGLNPGGALVLS  177 (261)
T ss_dssp             CSEEEEEEESCG-------GGSCHHHHH-----------HHHHHHHHHEEEEEEEEEE
T ss_pred             cccccceeeeee-------eecCchhHh-----------HHHHHHHHHcCCCcEEEEE
Confidence            367888766432       123333322           2456667788888887764

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=96.60  E-value=0.024  Score=46.22  Aligned_cols=99  Identities=12%  Similarity=0.039  Sum_probs=69.7

Q ss_pred             CCCEEEEEcCCCc-hHHHHHHHHHH-cCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQG-IGFGIAERLGL-EGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~g-iG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++||..|++.| +...+   +++ .|++|+.++.+++.++..++.+...+ .++.+++.|..+.+            .
T Consensus       122 ~g~rVLDIGcG~G~~ta~~---lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~------------d  186 (298)
T 3fpf_A          122 RGERAVFIGGGPLPLTGIL---LSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID------------G  186 (298)
T ss_dssp             TTCEEEEECCCSSCHHHHH---HHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG------------G
T ss_pred             CcCEEEEECCCccHHHHHH---HHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC------------C
Confidence            5789999998753 33222   233 48999999999999888877776543 58999999987521            1


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      +..|+++..+.. .        +              .-.+.+.+.+.++++|++++...
T Consensus       187 ~~FDvV~~~a~~-~--------d--------------~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          187 LEFDVLMVAALA-E--------P--------------KRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             CCCSEEEECTTC-S--------C--------------HHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCcCEEEECCCc-c--------C--------------HHHHHHHHHHHcCCCcEEEEEcC
Confidence            479999976542 1        1              12355566778889999987663

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.59  E-value=0.005  Score=52.49  Aligned_cols=111  Identities=15%  Similarity=0.171  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      .|.+|||.|+ |++|...++.+...|+ +|++++++.++++.++    +.+..  +  .|..+.+-+.   +++.+.. +
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~--~--i~~~~~~~~~---~~~~~~~~g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DAGFE--T--IDLRNSAPLR---DQIDQILGK  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TTTCE--E--EETTSSSCHH---HHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCc--E--EcCCCcchHH---HHHHHHhCC
Confidence            5789999996 9999999988888899 8999999987665432    23442  2  3554432111   2222222 2


Q ss_pred             -CCCEEEEcCCCCCCCC-C--ccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           89 -KIDVVVSNAAANPSVD-S--ILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~-~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                       .+|++|.++|...... .  ......+               ..+..++.++++|+++.++..
T Consensus       253 ~g~Dvvid~~g~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~gG~iv~~G~~  301 (398)
T 2dph_A          253 PEVDCGVDAVGFEAHGLGDEANTETPNG---------------ALNSLFDVVRAGGAIGIPGIY  301 (398)
T ss_dssp             SCEEEEEECSCTTCBCSGGGTTSBCTTH---------------HHHHHHHHEEEEEEEECCSCC
T ss_pred             CCCCEEEECCCCccccccccccccccHH---------------HHHHHHHHHhcCCEEEEeccc
Confidence             6999999998531000 0  0000011               233445677888899988754

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.59  E-value=0.0094  Score=48.09  Aligned_cols=167  Identities=15%  Similarity=0.148  Sum_probs=93.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHH-cCCeEE-EEeCCchhH--HHHH-------------HHHHhcCCeEEEEEecCCCHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGL-EGASVV-VSSRKQKNV--DEAV-------------VKLKARGIEVIGVVCHVSNGQ   74 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~-~G~~V~-~~~r~~~~~--~~~~-------------~~~~~~~~~~~~~~~Dv~~~~   74 (255)
                      ..+|.|+|++|.+|+.+++.+.+ .|++|+ +++++.+..  ++..             ..+.+.-..+. +..|++.++
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~D-vVIDft~p~   83 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPE   83 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCC-EEEEcCChH
Confidence            35799999999999999999885 477766 566654320  0000             00000000111 345899999


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHH----------------HHHHhHHHHHHHHHHhhcccC
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKL----------------WDINVKSSILLLQDAAPHLQK  138 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~----------------~~~n~~~~~~~~~~~~~~~~~  138 (255)
                      ...+.+..+.+.  .+.+++-..|+.          .++.++.                +.+|+  .+.+++.+.+.+.+
T Consensus        84 ~~~~~~~~a~~~--G~~vVigTtG~~----------~e~~~~L~~~a~~~~vv~a~N~siGvn~--~~~l~~~aa~~~~~  149 (273)
T 1dih_A           84 GTLNHLAFCRQH--GKGMVIGTTGFD----------EAGKQAIRDAAADIAIVFAANFSVGVNV--MLKLLEKAAKVMGD  149 (273)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCCC----------HHHHHHHHHHTTTSCEEECSCCCHHHHH--HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhC--CCCEEEECCCCC----------HHHHHHHHHhcCCCCEEEEecCcHHHHH--HHHHHHHHHHhcCC
Confidence            888888777665  577777666532          2222221                11222  23344444444432


Q ss_pred             CCeEEEEcccCccCCCCCChhhHhhHHHHHHHHHHHHHHh---------------CC-CeeEEEEeCCcccCCc
Q 025273          139 GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM---------------AP-DTRVNCVAPGFVPTHF  196 (255)
Q Consensus       139 ~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~---------------~~-~v~v~~v~pg~v~t~~  196 (255)
                      +-.|=.+=   .+....-..+||.++...+.+.+.+...+               .+ +|.|.++.-|-+....
T Consensus       150 ~~dieiiE---~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~h  220 (273)
T 1dih_A          150 YTDIEIIE---AHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEH  220 (273)
T ss_dssp             TSEEEEEE---EECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEEE
T ss_pred             CCCEEEEE---eecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCccE
Confidence            22222221   12333445678999988888876655421               12 6889999866555443

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.59  E-value=0.0055  Score=45.97  Aligned_cols=113  Identities=12%  Similarity=0.091  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .+++||=.|++.|.   ++..|++.+.+|+.++.+++.++..++.+...+ .++.++..|..+...   ..      -+.
T Consensus        22 ~~~~vLDiGcG~G~---~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~---~~------~~~   89 (185)
T 3mti_A           22 DESIVVDATMGNGN---DTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDH---YV------REP   89 (185)
T ss_dssp             TTCEEEESCCTTSH---HHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGG---TC------CSC
T ss_pred             CCCEEEEEcCCCCH---HHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHh---hc------cCC
Confidence            47899999977653   444566668999999999998888877776554 577777755433211   10      136


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      +|.++.+.++......           .+.........+++.+.+.++++|.++.+.
T Consensus        90 fD~v~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  135 (185)
T 3mti_A           90 IRAAIFNLGYLPSADK-----------SVITKPHTTLEAIEKILDRLEVGGRLAIMI  135 (185)
T ss_dssp             EEEEEEEEC----------------------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCEEEEeCCCCCCcch-----------hcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence            8999988765431100           001111122345667778888888887764

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.59  E-value=0.043  Score=45.42  Aligned_cols=114  Identities=13%  Similarity=0.135  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc-----CCeEEEEEecCCCHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR-----GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      ..+++.|+|+ |.+|..++..|+..|.  .|+++|++++.++....++...     ..++.. ..|..   .        
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~-t~d~~---~--------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS-GKDYS---V--------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE-ESSSC---S--------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE-cCCHH---H--------
Confidence            4578999999 9999999999999997  7999999988777665555432     112221 22321   1        


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                         +..-|++|..+|.....+   +...+    .+..|..-...+.+.+.++ .+.+.++++|-.
T Consensus        87 ---~~daDiVIitaG~p~kpG---~tR~d----ll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNP  140 (330)
T 3ldh_A           87 ---SAGSKLVVITAGARQQEG---ESRLN----LVQRNVNIFKFIIPNIVKH-SPDCLKELHPEL  140 (330)
T ss_dssp             ---CSSCSEEEECCSCCCCSS---CCTTG----GGHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred             ---hCCCCEEEEeCCCCCCCC---CCHHH----HHHhhHHHHHHHHHHHHhh-CCCceEEeCCCc
Confidence               237899999999754221   12122    2334443334444444444 456778887754

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=96.57  E-value=0.002  Score=53.42  Aligned_cols=99  Identities=12%  Similarity=0.159  Sum_probs=65.4

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ...+.||++.|.|. |.||+++++.|...|++|+..+|+....+..        ...  ..     ..+++++++     
T Consensus       132 ~~~l~gktvGIiGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------~~~--~~-----~~~l~ell~-----  190 (324)
T 3evt_A          132 TSTLTGQQLLIYGT-GQIGQSLAAKASALGMHVIGVNTTGHPADHF--------HET--VA-----FTATADALA-----  190 (324)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSCCCCTTC--------SEE--EE-----GGGCHHHHH-----
T ss_pred             CccccCCeEEEECc-CHHHHHHHHHHHhCCCEEEEECCCcchhHhH--------hhc--cc-----cCCHHHHHh-----
Confidence            34689999999974 7999999999999999999999986542210        111  11     223444544     


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                        .-|+++.+.-......  .-.                   ....+..|+++..+|++|...
T Consensus       191 --~aDvV~l~lPlt~~t~--~li-------------------~~~~l~~mk~gailIN~aRG~  230 (324)
T 3evt_A          191 --TANFIVNALPLTPTTH--HLF-------------------STELFQQTKQQPMLINIGRGP  230 (324)
T ss_dssp             --HCSEEEECCCCCGGGT--TCB-------------------SHHHHHTCCSCCEEEECSCGG
T ss_pred             --hCCEEEEcCCCchHHH--Hhc-------------------CHHHHhcCCCCCEEEEcCCCh
Confidence              4799988765432111  111                   123457788888999998644

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.57  E-value=0.0047  Score=51.74  Aligned_cols=43  Identities=16%  Similarity=0.077  Sum_probs=37.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHH-HcCCeEEEEeCCchhHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQKNVDE   51 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~-~~G~~V~~~~r~~~~~~~   51 (255)
                      ..+.||++.|.| .|.||+++++.|. ..|++|++.+|+....+.
T Consensus       159 ~~l~g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~  202 (348)
T 2w2k_A          159 HNPRGHVLGAVG-LGAIQKEIARKAVHGLGMKLVYYDVAPADAET  202 (348)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH
T ss_pred             cCCCCCEEEEEE-ECHHHHHHHHHHHHhcCCEEEEECCCCcchhh
Confidence            468999999997 5999999999999 999999999998765443

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=96.54  E-value=0.0051  Score=51.30  Aligned_cols=96  Identities=13%  Similarity=0.113  Sum_probs=65.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+.||++.|.|- |.||+.+++.|...|++|+..+|+.+..      . ...  +.+     .   +++++++      
T Consensus       144 ~~l~gktvgIiGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~------~-~~~--~~~-----~---~l~ell~------  199 (343)
T 2yq5_A          144 NEIYNLTVGLIGV-GHIGSAVAEIFSAMGAKVIAYDVAYNPE------F-EPF--LTY-----T---DFDTVLK------  199 (343)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCGG------G-TTT--CEE-----C---CHHHHHH------
T ss_pred             cccCCCeEEEEec-CHHHHHHHHHHhhCCCEEEEECCChhhh------h-hcc--ccc-----c---CHHHHHh------
Confidence            4578999999975 8999999999999999999999987541      1 111  111     1   3444544      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                       .-|+++.+........  .-.+                   ...+..|+++..+|++|...
T Consensus       200 -~aDvV~l~~Plt~~t~--~li~-------------------~~~l~~mk~gailIN~aRg~  239 (343)
T 2yq5_A          200 -EADIVSLHTPLFPSTE--NMIG-------------------EKQLKEMKKSAYLINCARGE  239 (343)
T ss_dssp             -HCSEEEECCCCCTTTT--TCBC-------------------HHHHHHSCTTCEEEECSCGG
T ss_pred             -cCCEEEEcCCCCHHHH--HHhh-------------------HHHHhhCCCCcEEEECCCCh
Confidence             4799998876543211  1111                   22456788888999998654

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.52  E-value=0.0019  Score=52.23  Aligned_cols=72  Identities=19%  Similarity=0.264  Sum_probs=51.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++++++++|.|+ |++|+++++.|++.|++|++++|+.++.+.+.+++   +  +..  .+  +.   .+.+       .
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~---g--~~~--~~--~~---~~~~-------~  185 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF---P--LEV--VN--SP---EEVI-------D  185 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS---C--EEE--CS--CG---GGTG-------G
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc---C--Cee--eh--hH---Hhhh-------c
Confidence            467899999996 79999999999999999999999987665543322   1  111  11  11   1111       2


Q ss_pred             CCCEEEEcCCCC
Q 025273           89 KIDVVVSNAAAN  100 (255)
Q Consensus        89 ~~d~lv~~ag~~  100 (255)
                      ..|++|++....
T Consensus       186 ~aDiVi~atp~~  197 (275)
T 2hk9_A          186 KVQVIVNTTSVG  197 (275)
T ss_dssp             GCSEEEECSSTT
T ss_pred             CCCEEEEeCCCC
Confidence            689999998754

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.52  E-value=0.012  Score=48.89  Aligned_cols=99  Identities=15%  Similarity=0.139  Sum_probs=65.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..+.||++.|.| .|.||+++++.|...|++|+..+|+....+... +.   +  +   ..  .   +++++++      
T Consensus       141 ~~l~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-~~---g--~---~~--~---~l~ell~------  199 (330)
T 4e5n_A          141 TGLDNATVGFLG-MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQ-RL---G--L---RQ--V---ACSELFA------  199 (330)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHH-HH---T--E---EE--C---CHHHHHH------
T ss_pred             CccCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHH-hc---C--c---ee--C---CHHHHHh------
Confidence            458899999998 589999999999999999999999874333221 11   1  1   11  1   2444444      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                       .-|+++.+.-......  .-.                   .+..++.|+++..+|+++...
T Consensus       200 -~aDvV~l~~P~t~~t~--~li-------------------~~~~l~~mk~gailIN~arg~  239 (330)
T 4e5n_A          200 -SSDFILLALPLNADTL--HLV-------------------NAELLALVRPGALLVNPCRGS  239 (330)
T ss_dssp             -HCSEEEECCCCSTTTT--TCB-------------------CHHHHTTSCTTEEEEECSCGG
T ss_pred             -hCCEEEEcCCCCHHHH--HHh-------------------CHHHHhhCCCCcEEEECCCCc
Confidence             4699888766433111  111                   123467888888899988643

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.52  E-value=0.022  Score=46.86  Aligned_cols=144  Identities=14%  Similarity=0.042  Sum_probs=84.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++|.|+|+ |.+|..++..|+..+  ..|++.|+++++++....++....   ..+.+. .|  +.+.           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHHH-----------h
Confidence            46899998 999999999999887  569999999887776666665421   122222 12  2222           3


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc--------CCCCCChh
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY--------QPQSSMAM  159 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~--------~~~~~~~~  159 (255)
                      ..-|++|..+|.....    ..+..   ..+..|.--...+.+.+.++ .+.+.++++|-....        .+.+....
T Consensus        66 ~~aD~Vii~ag~~~~~----g~~r~---dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rv  137 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRP----GETRL---QLLDRNAQVFAQVVPRVLEA-APEAVLLVATNPVDVMTQVAYALSGLPPGRV  137 (310)
T ss_dssp             TTEEEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHHHHHHHHHHHHTCCGGGE
T ss_pred             CCCCEEEECCCCCCCC----CcCHH---HHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCchHHHHHHHHHHcCCCHHHE
Confidence            3789999999975321    23332   23455554444444544444 356788887643321        12333333


Q ss_pred             hHh-hHHHHHHHHHHHHHHhC
Q 025273          160 YGV-TKTALLGLTKALAAEMA  179 (255)
Q Consensus       160 y~~-sK~a~~~l~~~la~e~~  179 (255)
                      ++. .-.-...+-+.++..++
T Consensus       138 iG~gt~LD~~R~~~~la~~lg  158 (310)
T 2xxj_A          138 VGSGTILDTARFRALLAEYLR  158 (310)
T ss_dssp             EECTTHHHHHHHHHHHHHHHT
T ss_pred             EecCcchhHHHHHHHHHHHhC
Confidence            444 22223455556666653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	255
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-66
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-66
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-64
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	5e-64
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-63
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	4e-62
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	4e-62
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-61
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	7e-61
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	5e-60
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	7e-60
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-59
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	6e-59
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	7e-59
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	7e-59
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	9e-59
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-58
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-58
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	9e-58
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-57
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-57
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-57
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-57
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-56
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	4e-56
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-56
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-55
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	4e-55
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	9e-55
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-54
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-54
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-54
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	4e-54
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-53
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-53
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-52
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	4e-52
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-51
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	9e-51
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-50
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-50
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	4e-50
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	5e-50
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	8e-50
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-49
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-49
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	6e-49
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-44
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-44
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-43
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	7e-43
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	6e-41
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-40
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-39
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-38
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-36
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-36
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-32
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-32
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-31
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	4e-30
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	3e-29
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-29
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-27
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-25
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-14
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-10
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	7e-10
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-05
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.002

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  203 bits (519), Expect = 3e-66
 Identities = 74/250 (29%), Positives = 120/250 (48%), Gaps = 14/250 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
            F GK  +VT   +GIG  IA+    EGA V +   + +  + A        I       
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA------EAIGGAFFQV 55

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            + + ++R   + +     G++DV+V+NAA      S L  +     ++ ++N+ + + L
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAP-GSALTVRLPEWRRVLEVNLTAPMHL 114

Query: 129 LQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
              AA  ++K    ++V ++S+ G   +   A Y  +K  L+ LT++LA ++AP   RVN
Sbjct: 115 SALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVN 174

Query: 186 CVAPGFVPT----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            VAPG + T             +  R+  E    L RLG   ++A A  FLAS+ AS+IT
Sbjct: 175 AVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT 234

Query: 242 GETLVVAGGM 251
           G  L V GGM
Sbjct: 235 GAILPVDGGM 244

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  203 bits (519), Expect = 3e-66
 Identities = 79/246 (32%), Positives = 119/246 (48%), Gaps = 6/246 (2%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R + K+A++T    GIG  IAER  +EGA + ++        EA   ++  G  V+ V C
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKC 59

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            VS     +    Q I  FG+ D++V+NA   P +    +       K ++INV S  L+
Sbjct: 60  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIP-FDELTFEQWKKTFEINVDSGFLM 118

Query: 129 LQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            +   P +       ++ ++S   +    +   Y  TK A +G T+ALA+++  D   VN
Sbjct: 119 AKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVN 178

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
            +AP  V T   E    +            + RL    D+  AAAFLASDDAS+ITG+TL
Sbjct: 179 AIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTL 238

Query: 246 VVAGGM 251
            V GGM
Sbjct: 239 AVDGGM 244

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (509), Expect = 1e-64
 Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 11/249 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R+ GKV +VT   +GIG GI       GA VV+  + +         L+      + ++C
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE----SGGRALEQELPGAVFILC 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V+     K L+++TI +FG++D VV+NA  +P      +T      +L ++N+  +  L
Sbjct: 59  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118

Query: 129 LQDAAPHLQKGS-SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
            + A P+L+K   +V+ ISS+ G   Q+    Y  TK A+  +TKALA + +P   RVNC
Sbjct: 119 TKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNC 178

Query: 187 VAPGFVPT----HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           ++PG + T      A  +       +       L R+G   ++ AAA FLAS +A++ TG
Sbjct: 179 ISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS-EANFCTG 237

Query: 243 ETLVVAGGM 251
             L+V GG 
Sbjct: 238 IELLVTGGA 246

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  198 bits (505), Expect = 5e-64
 Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 17/260 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---VIG 65
           RF  KVAI+T S+ GIG   A     EGA V ++ R  + ++E   ++ A G+    V  
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTKESVLDKLWDINV 122
           VV  V+    +  +++ T+ KFGK+D++V+NA A   +    +         D   ++N+
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 123 KSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           +S I L + A PHL   KG  V + S  +G         Y + K A+   T+  A ++  
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 181 D-TRVNCVAPGFVPTHFAEYITSND-------GVRQTIEQNTLLNRLGTTRDMAAAAAFL 232
              RVN ++PG V T F   +   +           T+++      +G  +D+A   AFL
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL 241

Query: 233 ASDD-ASYITGETLVVAGGM 251
           A    +SYI G  LVV GG 
Sbjct: 242 ADRKTSSYIIGHQLVVDGGS 261

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  196 bits (499), Expect = 4e-63
 Identities = 84/254 (33%), Positives = 134/254 (52%), Gaps = 10/254 (3%)

Query: 7   AKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           A R+  +G  A+VT  ++GIG+GI E L   GASV   SR QK +++ + + +++G +V 
Sbjct: 1   AGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKF-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
             VC +S+  +R+ L+N     F GK++++V+NA                   +  IN +
Sbjct: 61  ASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY-KEAKDYTVEDYSLIMSINFE 119

Query: 124 SSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           ++  L   A P L   +  +VV ISS++G       A+YG TK A+  LT+ LA E A D
Sbjct: 120 AAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD 179

Query: 182 T-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQ---NTLLNRLGTTRDMAAAAAFLASDDA 237
             RVN V PG + T   E    +   ++ + +      L R+G  +++AA  AFL    A
Sbjct: 180 NIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAA 239

Query: 238 SYITGETLVVAGGM 251
           SY+TG+ + V GG+
Sbjct: 240 SYVTGQIIYVDGGL 253

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  193 bits (492), Expect = 4e-62
 Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 9/252 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GKVAI+T  T GIG  IA +   EGA V+++ R     ++A   +     ++     
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQH 61

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
             S+      L + T + FG +  +V+NA       S+ +T  +   KL  +N+      
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 129 LQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT--- 182
            +     ++    G+S++ +SSI G+    S+  Y  +K A+  ++K+ A + A      
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDV 180

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           RVN V PG++ T   + +   +    +    T +  +G   D+A    +LAS+++ + TG
Sbjct: 181 RVNTVHPGYIKTPLVDDLPGAE-EAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATG 239

Query: 243 ETLVVAGGMPSR 254
              VV GG  ++
Sbjct: 240 SEFVVDGGYTAQ 251

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  193 bits (492), Expect = 4e-62
 Identities = 80/251 (31%), Positives = 127/251 (50%), Gaps = 8/251 (3%)

Query: 7   AKRF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVI 64
           ++R+  + K  +VT  T+GIG  I E     GA +   +R +  ++E + K + +G +V 
Sbjct: 1   SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVT 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKF-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVK 123
           G VC  S   +R+ L+      F GK+D++++N  A  S    L             N++
Sbjct: 61  GSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS-KPTLDYTAEDFSFHISTNLE 119

Query: 124 SSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           S+  L Q A P L+     +++ +SSIAG    S  ++Y  TK AL  L + LA E A D
Sbjct: 120 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD 179

Query: 182 T-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
             R N VAP  + T  AE +  +D  ++ +     L R G   ++++  AFL    ASYI
Sbjct: 180 GIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYI 238

Query: 241 TGETLVVAGGM 251
           TG+T+ V GG+
Sbjct: 239 TGQTICVDGGL 249

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  192 bits (489), Expect = 2e-61
 Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 17/260 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI---EVIG 65
           RF  K  I+T S+ GIG   A     EGA+V ++ R  + ++E    +   G+   +V  
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 61

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAA---NPSVDSILQTKESVLDKLWDINV 122
           VV  V+    +  +IN T+++FGKIDV+V+NA A   +    +       +  K   +N+
Sbjct: 62  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 123 KSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           ++ I + +   PHL    G  V + S +AG Q Q     Y + K AL   T++ A ++A 
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181

Query: 181 D-TRVNCVAPGFVPTHFAEYITSNDGVRQTIE-------QNTLLNRLGTTRDMAAAAAFL 232
              RVN V+PG V T F   +   D   Q          +   +   G    +A    FL
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 241

Query: 233 ASDDAS-YITGETLVVAGGM 251
           A  + S YI G+++V  GG 
Sbjct: 242 ADRNLSFYILGQSIVADGGT 261

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (484), Expect = 7e-61
 Identities = 59/254 (23%), Positives = 118/254 (46%), Gaps = 14/254 (5%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI--EVIG 65
           +R++ ++A+VT ++ GIG  +A  L  +G  VV  +R   N++E   + K+ G    +I 
Sbjct: 6   ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP 65

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
             C +SN +   ++ +    +   +D+ ++NA      D++L    S    ++++NV + 
Sbjct: 66  YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLAL 124

Query: 126 ILLLQDAAPHLQK----GSSVVLISSIAGYQ--PQSSMAMYGVTKTALLGLTKALAAEMA 179
            +  ++A   +++       ++ I+S++G++  P S    Y  TK A+  LT+ L  E+ 
Sbjct: 125 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 184

Query: 180 PDT---RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
                 R  C++PG V T FA  +   D   +         +     D+A A  ++ S  
Sbjct: 185 EAQTHIRATCISPGVVETQFAFKLH--DKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTP 242

Query: 237 ASYITGETLVVAGG 250
           A    G+  +   G
Sbjct: 243 AHIQIGDIQMRPTG 256

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  188 bits (478), Expect = 5e-60
 Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 11/250 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R QGKVA+VT    G+G  + + L  EGA V  S   +    +   +L   G   + V  
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRH 59

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            VS+      ++     + G ++V+V+NA      D +   +     +L  IN +S  + 
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGD-METGRLEDFSRLLKINTESVFIG 118

Query: 129 LQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT---RV 184
            Q     +++ G S++ ++S++ + P    A Y  +K A+  LT+A A          RV
Sbjct: 119 CQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLG---TTRDMAAAAAFLASDDASYIT 241
           N + P  + T   +        ++ +  +  LNR G       +A    FLASD++S ++
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238

Query: 242 GETLVVAGGM 251
           G  L     +
Sbjct: 239 GSELHADNSI 248

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  187 bits (477), Expect = 7e-60
 Identities = 74/252 (29%), Positives = 126/252 (50%), Gaps = 6/252 (2%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
           K       + KVA+VT + +GIG  IA+ L    + V+  SR QK+ D  V ++K+ G E
Sbjct: 1   KENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
             G    VS  ++   +IN+ + +   +D++V+NA        + + K    + +   N+
Sbjct: 61  SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFL-RMKNDEWEDVLRTNL 119

Query: 123 KSSILLLQDAAPH--LQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
            S   + Q  +      +   ++ ISSI G       A Y  +K  ++G TK+LA E+A 
Sbjct: 120 NSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELAS 179

Query: 181 DT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
               VN +APGF+ +   + I  ++ +++ I  N    R+GT  ++A  A FL+SD + Y
Sbjct: 180 RNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGY 237

Query: 240 ITGETLVVAGGM 251
           I G   V+ GG+
Sbjct: 238 INGRVFVIDGGL 249

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  186 bits (474), Expect = 2e-59
 Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 17/260 (6%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           K+F GKV +VT +   IG   A RL  EG ++ +    ++ +++A   ++ +G+E    V
Sbjct: 1   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           C V++ +     ++  +  FGKID + +NA    +   +         ++  INV  +  
Sbjct: 61  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFH 120

Query: 128 LLQDAAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           +L+  +  +   +   +V  +S+AG +   +MA YG +K A++ LT+  A ++AP   RV
Sbjct: 121 VLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRV 180

Query: 185 NCVAPGFVPTHFAE--------------YITSNDGVRQTIEQNTLLNRLGTTRDMAAAAA 230
           N ++PG++   F                + T    V Q +  +  + R G   ++    A
Sbjct: 181 NAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA 240

Query: 231 FLASDDASYITGETLVVAGG 250
           FL  DD+S++TG  L +AGG
Sbjct: 241 FLLGDDSSFMTGVNLPIAGG 260

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  186 bits (472), Expect = 6e-59
 Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 17/257 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           + +G+  ++T    G+G  + +R   EGA V V  +  + + E        G  V+G+V 
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELE---TDHGDNVLGIVG 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD----KLWDINVKS 124
            V + + +K   ++ + +FGKID ++ NA       +++   E  LD    +++ INVK 
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 125 SILLLQDAAPHLQK-GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTR 183
            I  ++   P L     +V+   S AG+ P     +Y   K A++GL + LA E+AP  R
Sbjct: 119 YIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVR 178

Query: 184 VNCVAPGFVPTHF--------AEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS- 234
           VN V  G + +               S   +   ++    + R+    +   A  F A+ 
Sbjct: 179 VNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATR 238

Query: 235 DDASYITGETLVVAGGM 251
            DA+  TG  L   GG+
Sbjct: 239 GDAAPATGALLNYDGGL 255

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  185 bits (470), Expect = 7e-59
 Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 13/247 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
            F G  A+VT + +GIG    + L   GA VV  +R     +  +V L      +  V  
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT----NSDLVSLAKECPGIEPVCV 57

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            + +         + +   G +D++V+NAA        L+  +   D+ + +N++S   +
Sbjct: 58  DLGDWDA----TEKALGGIGPVDLLVNNAALVIM-QPFLEVTKEAFDRSFSVNLRSVFQV 112

Query: 129 LQDAAPHLQKGSS---VVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
            Q  A  +        +V +SS+  +    ++  Y  TK A+  LTKA+A E+ P   RV
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 172

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           N V P  V T   + ++++    + +++   L +     D+  +  FL SD ++  +G  
Sbjct: 173 NSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGG 232

Query: 245 LVVAGGM 251
           ++V  G 
Sbjct: 233 ILVDAGY 239

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  185 bits (471), Expect = 7e-59
 Identities = 69/260 (26%), Positives = 104/260 (40%), Gaps = 17/260 (6%)

Query: 4   MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIE 62
             +   F  K  IVT   +GIG      +   GA+V V  R   +  E   K+ K  G++
Sbjct: 3   FTI--SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK 60

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
                C VSN       I Q     G I  +++NA  +  V    +        ++D+NV
Sbjct: 61  TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNV 119

Query: 123 KSSILLLQDAAPHL---QKGSSVVLIS-------SIAGYQPQSSMAMYGVTKTALLGLTK 172
                  +  A      Q+  S+V+ S       + +      +   Y  +K A   L K
Sbjct: 120 FGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 179

Query: 173 ALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF 231
            LAAE A    RVN ++PG+V T    ++  +  +R     N  LNR     +M   A  
Sbjct: 180 GLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAIL 237

Query: 232 LASDDASYITGETLVVAGGM 251
           L SD A+Y+TG    + GG 
Sbjct: 238 LLSDHATYMTGGEYFIDGGQ 257

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  185 bits (471), Expect = 9e-59
 Identities = 74/258 (28%), Positives = 120/258 (46%), Gaps = 15/258 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE---VIG 65
           RF GK  I+T S+ GIG   A     EGA V ++ R +  ++E   ++   G+    +  
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVD-SILQTKESVLDKLWDINVKS 124
           VV  V+    + ++IN T+ KFGKID++V+NA AN +   +       +  K + +N ++
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 125 SILLLQDAAPHLQKGSSVV--LISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
            I + Q    HL K    +  + S +AG Q  S    Y   K AL   T+  A ++    
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180

Query: 183 -RVNCVAPGFVPTHFAEYITSNDGVRQTIE-------QNTLLNRLGTTRDMAAAAAFLAS 234
            RVN V+PG V T F   +   +     +        +   +   G   ++A    FLA 
Sbjct: 181 VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 240

Query: 235 DD-ASYITGETLVVAGGM 251
            + +SYI G+++V  GG 
Sbjct: 241 RNLSSYIIGQSIVADGGS 258

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  184 bits (468), Expect = 2e-58
 Identities = 74/252 (29%), Positives = 117/252 (46%), Gaps = 9/252 (3%)

Query: 9   RF--QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
           R+  +G  A+VT  ++GIG+ I E L   GA V   SR +K +DE +   + +G+ V G 
Sbjct: 1   RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
           VC + +  +R  L+      F     ++ N A            E   + +   N +++ 
Sbjct: 61  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120

Query: 127 LLLQ--DAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-R 183
            L Q         +  +V+ +SSIAG+    S+++Y  +K A+  +TK+LA E A D  R
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 180

Query: 184 VNCVAPGFVPTHFAE----YITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
           VN VAPG + T   E                   T + R G  ++++A  AFL    ASY
Sbjct: 181 VNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY 240

Query: 240 ITGETLVVAGGM 251
           ITG+ +   GG 
Sbjct: 241 ITGQIIWADGGF 252

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (466), Expect = 2e-58
 Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 13/250 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIG 65
           M     G+  +VT + +GIG G  + L   GA VV  SR Q ++D  V +       +  
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEP 56

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           V   + + +       + +   G +D++V N AA   +   L+  +   D+ +++N+++ 
Sbjct: 57  VCVDLGDWEA----TERALGSVGPVDLLV-NNAAVALLQPFLEVTKEAFDRSFEVNLRAV 111

Query: 126 ILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
           I + Q  A  L       ++V +SS    +  ++ ++Y  TK AL  LTK +A E+ P  
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHK 171

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            RVN V P  V T   +   S+    +T+     L +      +  A  FL SD +   T
Sbjct: 172 IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTT 231

Query: 242 GETLVVAGGM 251
           G TL V GG 
Sbjct: 232 GSTLPVEGGF 241

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  182 bits (463), Expect = 9e-58
 Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 10/258 (3%)

Query: 1   MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG 60
            + +    R  GK AI+T +  GIG  IA      GASVVVS       +  V +++  G
Sbjct: 4   SDNL----RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG 59

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            +     C +++ Q+   L +  I K GK+D++V+NA              +   + +++
Sbjct: 60  GQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG--PKPFDMPMADFRRAYEL 117

Query: 121 NVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
           NV S   L Q  AP +    G  ++ I+S+A      +M  Y  +K A   L + +A ++
Sbjct: 118 NVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDL 177

Query: 179 APDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
                RVN +APG + T   + +     + Q + Q+T + RLG  +D+A AA FL S  A
Sbjct: 178 GEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAA 236

Query: 238 SYITGETLVVAGGMPSRL 255
           S+++G+ L V+GG    L
Sbjct: 237 SWVSGQILTVSGGGVQEL 254

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  182 bits (464), Expect = 1e-57
 Identities = 76/251 (30%), Positives = 121/251 (48%), Gaps = 9/251 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R Q KVAI+T    GIG   A+     GA VV++     +  +    + +  + +  V C
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV-ISFVHC 61

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVD-SILQTKESVLDKLWDINVKSSIL 127
            V+  +  +NL++ TI K GK+D++  N     +   SIL+       ++ DINV  + L
Sbjct: 62  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 128 LLQDAAPH--LQKGSSVVLISSIAGYQP-QSSMAMYGVTKTALLGLTKALAAEMAPDT-R 183
           + + AA      K  S+V  +SI+ +   +    +Y  TK A+LGLT +L  E+     R
Sbjct: 122 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 181

Query: 184 VNCVAPGFVPTHFAEYITSNDGVRQ---TIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
           VNCV+P  V +     +   D  R      +   L   L    D+A A A+LA D++ Y+
Sbjct: 182 VNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV 241

Query: 241 TGETLVVAGGM 251
           +G  LV+ GG 
Sbjct: 242 SGLNLVIDGGY 252

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (466), Expect = 1e-57
 Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 10/256 (3%)

Query: 5   KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-----R 59
                 QG+VAIVT    GIG  I + L   G++VV++SRK + +  A  +L+A     +
Sbjct: 5   LAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK 64

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
              VI + C++ N ++  NL+  T++ FGKI+ +V+N      +             + +
Sbjct: 65  QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLE 123

Query: 120 INVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
            N+  +  + +        +    ++   +            G  +  +  LTK+LA E 
Sbjct: 124 TNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEW 183

Query: 179 APDT-RVNCVAPGFVPTHFAE--YITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
           A    R+NCVAPG + +  A   Y +      +   Q     R+G   ++++   FL S 
Sbjct: 184 ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSP 243

Query: 236 DASYITGETLVVAGGM 251
            AS+ITG+++ V GG 
Sbjct: 244 AASFITGQSVDVDGGR 259

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  181 bits (461), Expect = 1e-57
 Identities = 79/247 (31%), Positives = 125/247 (50%), Gaps = 6/247 (2%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVC 68
            +G+VA+VT  ++G+GFGIA+ L   G SVVV+SR  +   EA  KL  + G+E +   C
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            VSN ++ K L+    EKFGK+D VV+ A  N       +       ++ ++N+  +  +
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYV 121

Query: 129 LQDAAPH---LQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
            ++A          S + + S         +++ Y  +K  +  LTKALA E      RV
Sbjct: 122 CREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRV 181

Query: 185 NCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET 244
           N +APG+  T   E + S+      + +   L R G   D+   A FLAS++A Y+TG+ 
Sbjct: 182 NVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQI 241

Query: 245 LVVAGGM 251
           + V GG 
Sbjct: 242 IFVDGGW 248

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  180 bits (457), Expect = 5e-57
 Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 10/245 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R + K  ++T +  GIG    E    EGA +V    ++  + EA     A  +    VV 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA-----AEAVGAHPVVM 56

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V++    +    + +   G++D VV  A      +   +      + +  +N+  S L+
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 129 LQDAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
            + A+  + +K    +++++   Y      A Y  +   ++GLT+ LA E+     RVN 
Sbjct: 116 AKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNT 175

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV 246
           +APGF+ T     +   + VR+     T L R G   ++A AA FL SD++S+ITG+ L 
Sbjct: 176 LAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLF 233

Query: 247 VAGGM 251
           V GG 
Sbjct: 234 VDGGR 238

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  179 bits (455), Expect = 2e-56
 Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 15/257 (5%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGV 66
           K   GKVA+ T + +GIG GIA  LG  GASVVV+     K  +E V +LK  G + + +
Sbjct: 2   KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI 61

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              +S   +   L ++ +  FG +D V+SN+      D  L+  + + DK++++N +   
Sbjct: 62  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCD-ELEVTQELFDKVFNLNTRGQF 120

Query: 127 LLLQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
            + Q    H ++G  ++L SSIA       + A+Y  +K A+ G  +A A +       V
Sbjct: 121 FVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTV 180

Query: 185 NCVAPGFVPTHFAE-----------YITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA 233
           NC+APG V T   +                + + + +     L R+G   D+  A + L 
Sbjct: 181 NCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC 240

Query: 234 SDDASYITGETLVVAGG 250
            +++ +I G+ + + GG
Sbjct: 241 QEESEWINGQVIKLTGG 257

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  178 bits (452), Expect = 4e-56
 Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 10/246 (4%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
             GK  I+T   +G+G   A +    GA VV++    +       +L   G         
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V+  +  + ++    E+FG +D +V N A   +   +         K+ +IN+    + +
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLV-NNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           +   P +    G S+V ISS AG    +  + YG +K  + GL+K  A E+  D  RVN 
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTT-RDMAAAAAFLASDDASYITGETL 245
           V PG   T       +     +    NT + R+G    ++A A   L SD +SY+TG  L
Sbjct: 179 VHPGMTYTPMTA--ETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAEL 236

Query: 246 VVAGGM 251
            V GG 
Sbjct: 237 AVDGGW 242

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  178 bits (452), Expect = 4e-56
 Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 11/254 (4%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL--KARGIEVIGV 66
           RF  +V ++T    G+G   A RL  EGA + +     + ++ +   +   A   EV+  
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
           V  VS+  Q +  +  T E+FG+ID   +NA      +       +  DK+  IN++   
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120

Query: 127 LLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
           L L+     +++     VV  +S+ G +   + + Y   K  ++GLT+  A E      R
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 180

Query: 184 VNCVAPGFVPTHFAEYITSN------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
           +N +APG + T   E               +   Q     R G   ++AA  AFL SDDA
Sbjct: 181 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 240

Query: 238 SYITGETLVVAGGM 251
           SY+    + + GG 
Sbjct: 241 SYVNATVVPIDGGQ 254

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  176 bits (448), Expect = 1e-55
 Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 15/254 (5%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            +VA+VT +T GIG  IA RLG EG  V V +R ++ +   + +L+  G+E  G  C V 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           +  + + L+   +E++G +DV+V+N A  P   +  +  + +   + + N+     + + 
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNN-AGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 120

Query: 132 AAPHL----QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
                    +    +V I+S  G Q     A Y  +K  ++G TKAL  E+A     VN 
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180

Query: 187 VAPGFVPTHFAEYI---------TSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA 237
           V PGFV T  A  +          S +     I     + R     ++A   A+L    A
Sbjct: 181 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 240

Query: 238 SYITGETLVVAGGM 251
           + +T + L V GG+
Sbjct: 241 AAVTAQALNVCGGL 254

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  176 bits (448), Expect = 4e-55
 Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 5/255 (1%)

Query: 2   EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-G 60
           + M     FQGKVA +T    G+G G+   L   GA  V++SRK   +     ++ ++ G
Sbjct: 15  KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG 74

Query: 61  IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDI 120
            +V  + C V +    +N +++ I+  G  ++V++NAA N    +   +  +       +
Sbjct: 75  NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIV 134

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLI--SSIAGYQPQSSMAMYGVTKTALLGLTKALAAEM 178
              ++ + L+     ++       +  ++I        +      K  +  ++K+LAAE 
Sbjct: 135 LNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEW 194

Query: 179 APD-TRVNCVAPGFVPTHF-AEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
                R N + PG + T      +       + +       RLGT  ++A  AAFL SD 
Sbjct: 195 GKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDY 254

Query: 237 ASYITGETLVVAGGM 251
           AS+I G  +   GG 
Sbjct: 255 ASWINGAVIKFDGGE 269

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  174 bits (442), Expect = 9e-55
 Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 8/244 (3%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GK  +VT +  GIG    +    EGAS+V   R+++ + EAV  L+A   E I VV 
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEA---EAIAVVA 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            VS+ +  + +  + +E+FG++  V   A    S  S     E   +K+  +N+  S L+
Sbjct: 59  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLE-AWEKVLRVNLTGSFLV 117

Query: 129 LQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
            + A   L++G S+VL  S+AG         Y   K  ++GL + LA E+A    RVN +
Sbjct: 118 ARKAGEVLEEGGSLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNVL 176

Query: 188 APGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV 247
            PG + T     +       +     + L R G   ++A AA FL S++++YITG+ L V
Sbjct: 177 LPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYV 234

Query: 248 AGGM 251
            GG 
Sbjct: 235 DGGR 238

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  174 bits (442), Expect = 2e-54
 Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 15/260 (5%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVI 64
            +   +GKVA+VT + +GIG  +A  LG  G  V+V+        E VV  +K  G +  
Sbjct: 12  QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAA 71

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
            V  +V   +    +  + ++ FGK+D+V  + +   S   +        D+++ IN + 
Sbjct: 72  CVKANVGVVEDIVRMFEEAVKIFGKLDIVC-SNSGVVSFGHVKDVTPEEFDRVFTINTRG 130

Query: 125 SILLLQDAAPHLQKGSSVVLISSIAGYQPQSSM-AMYGVTKTALLGLTKALAAEMAPD-T 182
              + ++A  HL+ G  ++L+ SI G        A+Y  +K A+    + +A +MA    
Sbjct: 131 QFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKI 190

Query: 183 RVNCVAPGFVPT-----------HFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAF 231
            VN VAPG + T              E +++ +       Q + L R+G   D+A    F
Sbjct: 191 TVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCF 250

Query: 232 LASDDASYITGETLVVAGGM 251
           LAS+D  ++TG+ + + GG 
Sbjct: 251 LASNDGGWVTGKVIGIDGGA 270

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  174 bits (441), Expect = 2e-54
 Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 7/252 (2%)

Query: 6   MAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEV 63
           +     GK A+V    + + +GF IA +L   GA V +S + ++   EA    +A G  +
Sbjct: 2   LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL 61

Query: 64  IGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA---ANPSVDSILQTKESVLDKLWDI 120
           +     V+  ++   L     E FG +D +V   A           + T+        ++
Sbjct: 62  L-FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 121 NVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP 180
           +  S + + + A P L++G  +V ++  A  +      +  + K AL    + LA E+ P
Sbjct: 121 SAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGP 180

Query: 181 D-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
              RVN ++ G V T  A  I     +   + Q   L R  T  ++     FL S  AS 
Sbjct: 181 KGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASG 240

Query: 240 ITGETLVVAGGM 251
           ITGE + V  G 
Sbjct: 241 ITGEVVYVDAGY 252

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  174 bits (441), Expect = 2e-54
 Identities = 79/251 (31%), Positives = 129/251 (51%), Gaps = 6/251 (2%)

Query: 6   MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVI 64
           M K  +GKV ++T S+ G+G  +A R   E A VVV+ R +++   +V++ +K  G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60

Query: 65  GVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKS 124
            V   V+      NL+   I++FGK+DV+++NA     V    +   S  +K+ D N+  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVS-SHEMSLSDWNKVIDTNLTG 119

Query: 125 SILLLQDAAPHL---QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
           + L  ++A  +        +V+ +SS+    P      Y  +K  +  +T+ LA E AP 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179

Query: 182 T-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
             RVN + PG + T       ++   R  +E    +  +G   ++AA AA+LAS +ASY+
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYV 239

Query: 241 TGETLVVAGGM 251
           TG TL   GGM
Sbjct: 240 TGITLFADGGM 250

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  172 bits (438), Expect = 4e-54
 Identities = 57/246 (23%), Positives = 93/246 (37%), Gaps = 15/246 (6%)

Query: 15  AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ 74
           AIVT      G G A RL   G +V       K  DE                    + Q
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMSEQ 56

Query: 75  QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAP 134
           +   LI      +G++DV+VSN    P    I +          +        L+   A 
Sbjct: 57  EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 116

Query: 135 HLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
            ++  K   ++ I+S   + P   ++ Y   +     L  AL+ E+      V  + P +
Sbjct: 117 QMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNY 176

Query: 192 VPTHFAEYIT------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
           + +  + Y        +N      +++ T L RLGT +++    AFLAS    Y+TG+  
Sbjct: 177 LHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVF 236

Query: 246 VVAGGM 251
            +AGG 
Sbjct: 237 WLAGGF 242

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (435), Expect = 2e-53
 Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 27/256 (10%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCH 69
           GKVA+VT + QGIG   AE L L+GA V +     +   +    L  +    + + + C 
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++ QQ ++   + ++ FG++D++V+NA  N   +          +K   IN+ S I   
Sbjct: 63  VADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN---------WEKTLQINLVSVISGT 113

Query: 130 QDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTK--ALAAEMAPD- 181
                ++ K     G  ++ +SS+AG  P +   +Y  +K  ++G T+  ALAA +    
Sbjct: 114 YLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSG 173

Query: 182 TRVNCVAPGFVPTHFAEYITSNDG------VRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
            R+N + PGFV T   E I   +        +  I+       +     +A     L  D
Sbjct: 174 VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIED 233

Query: 236 DASYITGETLVVAGGM 251
           DA  + G  + +    
Sbjct: 234 DA--LNGAIMKITTSK 247

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  171 bits (433), Expect = 2e-53
 Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 9/245 (3%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F+GK+A+VT +++GIG  IAE L   GA V+ ++  +         L A G    G++ +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK---GLMLN 58

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++    ++++ +   +FG++D++V+NA        +    E   + + + N+ S   L 
Sbjct: 59  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEW-NDIIETNLSSVFRLS 117

Query: 130 QDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           +     +  ++   ++ I S+ G       A Y   K  L+G +K+LA E+A     VN 
Sbjct: 118 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNV 177

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV 246
           VAPGF+ T     ++ +   R  I       RLG  +++A A AFLASD+A+YITGETL 
Sbjct: 178 VAPGFIETDMTRALSDDQ--RAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLH 235

Query: 247 VAGGM 251
           V GGM
Sbjct: 236 VNGGM 240

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  170 bits (431), Expect = 2e-52
 Identities = 57/259 (22%), Positives = 100/259 (38%), Gaps = 29/259 (11%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS---------SRKQKNVDEAVVKLKAR 59
           RF G+V +VT +  G+G   A      GA VVV+          +     D+ V +++ R
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 60  GIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWD 119
           G + +     V  G++   L+   ++ FG+IDVVV+NA       S  +  +   D +  
Sbjct: 64  GGKAVANYDSVEAGEK---LVKTALDTFGRIDVVVNNAGILRD-RSFSRISDEDWDIIQR 119

Query: 120 INVKSSILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
           ++++ S  + + A  H+  Q    +++ +S +G       A Y   K  LLGL   L  E
Sbjct: 120 VHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIE 179

Query: 178 MAPDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
              +    N +AP          +  +            L        +A    +L   +
Sbjct: 180 GRKNNIHCNTIAPNAGSRMTETVMPED------------LVEALKPEYVAPLVLWLCH-E 226

Query: 237 ASYITGETLVVAGGMPSRL 255
           +    G    V  G   +L
Sbjct: 227 SCEENGGLFEVGAGWIGKL 245

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  167 bits (425), Expect = 4e-52
 Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 14/246 (5%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GKVA+V+   +G+G      +  EGA VV      +       +L         V  
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA---RYVHL 59

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V+   Q K  ++  +  FG + V+V N A   ++ +I     +   ++ D+N+    L 
Sbjct: 60  DVTQPAQWKAAVDTAVTAFGGLHVLV-NNAGILNIGTIEDYALTEWQRILDVNLTGVFLG 118

Query: 129 LQDAAPHLQKG--SSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           ++     +++    S++ ISSI G     +   Y  TK A+ GLTK+ A E+ P   RVN
Sbjct: 119 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 178

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
            + PG V T   +++  +          T L R     +++    +LASD++SY TG   
Sbjct: 179 SIHPGLVKTPMTDWVPED-------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEF 231

Query: 246 VVAGGM 251
           VV GG 
Sbjct: 232 VVDGGT 237

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  166 bits (420), Expect = 2e-51
 Identities = 62/256 (24%), Positives = 117/256 (45%), Gaps = 17/256 (6%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GK A++T S +GIG   AE    EGA V ++    +       ++   G     +  
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIAL 58

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V++       + + ++++G ID++V+NAA    +  I++      D+L+ INV  ++ +
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFM 117

Query: 129 LQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           +Q  A  +     G  ++ ++S AG + ++ + +Y  TK A++ LT++    +      V
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 177

Query: 185 NCVAPGFVPTHFAEYI---------TSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
           N +APG V     + +               ++ +       R+G   D+   A FLA+ 
Sbjct: 178 NAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATP 237

Query: 236 DASYITGETLVVAGGM 251
           +A YI  +T  V GG 
Sbjct: 238 EADYIVAQTYNVDGGN 253

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  164 bits (417), Expect = 9e-51
 Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 16/259 (6%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVIGVVC 68
           +GKVA+VT ST GIG GIA  L  +GA +V++        E V        G++V+    
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            +S G+  + L++  + + G+ID++V N A       I        D +  +N+ +    
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILV-NNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121

Query: 129 LQDAAPHLQKGS--SVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
              A PH++K     ++ I+S  G    ++ + Y   K  ++G TK  A E A      N
Sbjct: 122 TAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITAN 181

Query: 186 CVAPGFVPTHFAE----------YITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD 235
            + PG+V T   E           +      R+ + +     +  T   +   A FLASD
Sbjct: 182 AICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASD 241

Query: 236 DASYITGETLVVAGGMPSR 254
            A+ ITG T+ V GG  +R
Sbjct: 242 AAAQITGTTVSVDGGWTAR 260

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (415), Expect = 1e-50
 Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 9/245 (3%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           K   G++ ++T +  GIG   A       + +V+    +  ++E   K K  G +V   V
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 62

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
              SN +   +   +   + G + ++V N A       +  T++  ++K +++NV +   
Sbjct: 63  VDCSNREDIYSSAKKVKAEIGDVSILV-NNAGVVYTSDLFATQDPQIEKTFEVNVLAHFW 121

Query: 128 LLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT--- 182
             +   P +       +V ++S AG+     +  Y  +K A +G  K L  E+A      
Sbjct: 122 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 181

Query: 183 -RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            +  C+ P FV T F +    +  +  T+E   ++NRL           F+ S  A   T
Sbjct: 182 VKTTCLCPNFVNTGFIK--NPSTSLGPTLEPEEVVNRLMHGILTEQKMIFIPSSIAFLTT 239

Query: 242 GETLV 246
            E ++
Sbjct: 240 LERIL 244

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (414), Expect = 2e-50
 Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 18/251 (7%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVC 68
           R  GKV I+TA+ QGIG   A     EGA V+ +   +  + E       +   +   V 
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL-----EKYPGIQTRVL 57

Query: 69  HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
            V+     K  I+Q   +  ++DV+  N A      ++L  +E   D   ++NV+S  L+
Sbjct: 58  DVTK----KKQIDQFANEVERLDVLF-NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 129 LQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           ++   P +     G+ + + S  +  +   +  +Y  TK A++GLTK++AA+      R 
Sbjct: 113 IKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRC 172

Query: 185 NCVAPGFVPTHFAEYITSNDG----VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
           NCV PG V T   +      G     R    +     R  T  ++A    +LASD+++Y+
Sbjct: 173 NCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYV 232

Query: 241 TGETLVVAGGM 251
           TG  +++ GG 
Sbjct: 233 TGNPVIIDGGW 243

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  163 bits (412), Expect = 4e-50
 Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 8/250 (3%)

Query: 9   RFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
              GK  +VT  AS   I +GIA+ +  EGA +  + +  K +   V +  A+    I +
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVL 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANP----SVDSILQTKESVLDKLWDINV 122
            C V+       +  +  + + K D  V +    P      D +            DI+ 
Sbjct: 61  QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120

Query: 123 KSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT 182
            S + + +     L  GS+++ +S +   +   +  + G+ K +L    + +A  M P+ 
Sbjct: 121 YSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEG 180

Query: 183 -RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            RVN ++ G + T  A  I     +    E  T + R  T  D+  +AAFL SD ++ I+
Sbjct: 181 VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGIS 240

Query: 242 GETLVVAGGM 251
           GE + V GG 
Sbjct: 241 GEVVHVDGGF 250

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  162 bits (410), Expect = 5e-50
 Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 17/245 (6%)

Query: 10  FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
           F  +  +VT   +GIG  IA+RL  +G  V V+ R                  + GV   
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-----------GAPKGLFGVEVD 53

Query: 70  VSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLL 129
           V++            E  G ++V+V + A   +   +++  E   +K+ + N+  +  + 
Sbjct: 54  VTDSDAVDRAFTAVEEHQGPVEVLV-SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVA 112

Query: 130 QDAAPH--LQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           Q A+      K   ++ I S++G     + A Y  +K  ++G+ +++A E++      N 
Sbjct: 113 QRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANV 172

Query: 187 VAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV 246
           VAPG++ T     +  ++ ++Q   Q     R+GT  ++A   +FLAS+DASYI+G  + 
Sbjct: 173 VAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 230

Query: 247 VAGGM 251
           V GGM
Sbjct: 231 VDGGM 235

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  162 bits (410), Expect = 8e-50
 Identities = 39/255 (15%), Positives = 80/255 (31%), Gaps = 20/255 (7%)

Query: 9   RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE-AVVKLKARGIEVIGVV 67
               K  I  A+  GIG   +  L        V   + +N    A +K     + +    
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 68  CHVSN-GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
             V+    + K L+ +  ++   +D++++ A             +  +++   IN    +
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAG---------ILDDHQIERTIAINFTGLV 112

Query: 127 LLLQDAAPHLQ-----KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD 181
                            G  +  I S+ G+     + +Y  +K A++  T +LA      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 182 -TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI 240
                 + PG   T       S   V   + +  LL+    T +        A +  +  
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVAE-LLLSHPTQTSEQCGQNFVKAIE--ANK 229

Query: 241 TGETLVVAGGMPSRL 255
            G    +  G    +
Sbjct: 230 NGAIWKLDLGTLEAI 244

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  159 bits (403), Expect = 5e-49
 Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 20/244 (8%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           + K  +V A+++GIG  +A+ L  EGA V + +R ++ +  +  +          VVC +
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCDL 53

Query: 71  SNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
                    ++   EK  ++D++V   A  P      +       +  D    + I +++
Sbjct: 54  RK------DLDLLFEKVKEVDILV-LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 106

Query: 131 DAAPH--LQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCV 187
           +  P    +    +V I+S +   P  ++      + AL G  K L+ E+AP    VNCV
Sbjct: 107 NYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCV 166

Query: 188 APGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV 247
           APG+  T   + + S +  ++ +E    + R+    ++A+  AFL S+ ASY+TG+T+VV
Sbjct: 167 APGWTETERVKELLS-EEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVV 225

Query: 248 AGGM 251
            GG+
Sbjct: 226 DGGL 229

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  159 bits (403), Expect = 6e-49
 Identities = 72/244 (29%), Positives = 119/244 (48%), Gaps = 8/244 (3%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVS-SRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            V +VT +++GIG  IA  LG  G  V+V+ +R  K  +E   +++A G + I     VS
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
                + ++   I+ +G IDVVV+N A       +++ K+S  D++ D+N+    L  Q 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNN-AGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120

Query: 132 AAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
           A   +  ++   ++ I+S+ G       A Y   K  ++G +K  A E A     VN V 
Sbjct: 121 ATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVC 180

Query: 189 PGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA-SDDASYITGETLVV 247
           PGF+ +     +   + + + I     L R G   ++A    FLA S  ASYITG+   +
Sbjct: 181 PGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTI 238

Query: 248 AGGM 251
            GG+
Sbjct: 239 DGGI 242

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  159 bits (404), Expect = 6e-49
 Identities = 77/252 (30%), Positives = 117/252 (46%), Gaps = 14/252 (5%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           KVA+VT + QGIG  IA RL  +G +V ++            ++   G   + V   VS+
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDA 132
             Q    + Q  +  G  DV+V+NA   PS   I      ++DK+++INVK  I  +Q A
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTP-IESITPEIVDKVYNINVKGVIWGIQAA 120

Query: 133 APHLQKGSSVVLISS---IAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVA 188
               +K      I +    AG+     +A+Y  +K A+ GLT+  A ++AP    VN   
Sbjct: 121 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 180

Query: 189 PGFVPTHFAEYI---------TSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY 239
           PG V T     I                    +   L RL    D+AA  ++LAS D+ Y
Sbjct: 181 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY 240

Query: 240 ITGETLVVAGGM 251
           +TG++L++ GGM
Sbjct: 241 MTGQSLLIDGGM 252

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  147 bits (372), Expect = 3e-44
 Identities = 51/250 (20%), Positives = 95/250 (38%), Gaps = 26/250 (10%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           + A+VT    G+G   A  L   G  VVV   +++            G ++I V   V+ 
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTR 49

Query: 73  GQQRKNLINQTIEKFGKIDVVVSN--AAANPSVDSILQTKESVLDKLWDINVKSSILLLQ 130
            +  +  + +  E+     VV +     A   +            ++ ++N+  +  +L+
Sbjct: 50  EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 109

Query: 131 DAAPHL--------QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD- 181
            AA  +         +   +V  +S+A ++ Q   A Y  +K  ++ LT   A E+A   
Sbjct: 110 LAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWG 169

Query: 182 TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT 241
            RV  VAPG   T   + +           Q     RLG   + AA    +  +    + 
Sbjct: 170 IRVVTVAPGLFDTPLLQGLP-EKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLN 226

Query: 242 GETLVVAGGM 251
           GE + + G +
Sbjct: 227 GEVVRLDGAL 236

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  147 bits (371), Expect = 7e-44
 Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 27/262 (10%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK--LKARGIEVIGVVCHVS 71
            A++T   + IG  IA RL  +G  VVV  R  +   + +V     AR    +     +S
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 72  NGQQR----KNLINQTIEKFGKIDVVVSNAAANPSV----------DSILQTKESVLDKL 117
                    +++I+ +   FG+ DV+V+NA+A               +  +  ++ + +L
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 118 WDINVKSSILLLQDAAPHLQKGSSVVL-------ISSIAGYQPQSSMAMYGVTKTALLGL 170
           +  N  + + L++  A    +G +          +       P     +Y + K AL GL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 171 TKALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAA 229
           T+A A E+AP   RVN VAPG      A      +   +   +  L     +   +A A 
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPPA---MPQETQEEYRRKVPLGQSEASAAQIADAI 239

Query: 230 AFLASDDASYITGETLVVAGGM 251
           AFL S DA YITG TL V GG+
Sbjct: 240 AFLVSKDAGYITGTTLKVDGGL 261

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  145 bits (367), Expect = 1e-43
 Identities = 46/251 (18%), Positives = 96/251 (38%), Gaps = 24/251 (9%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGAS-------VVVSSRKQKNVDEAVVKLKARGIEVIG 65
            + ++T + +GIG  IA                +V+SSR   ++++  ++ +A G     
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
           +   +S+    + L    +E++G ID +V N A      ++    E   D   + N+K +
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLV-NNAGVGRFGALSDLTEEDFDYTMNTNLKGT 120

Query: 126 ILLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT- 182
             L Q     +  Q    +  I+S+A  +     ++Y ++K    GL + +         
Sbjct: 121 FFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 180

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           R+  V PG V T     +            + +   +    D+AA         +  +  
Sbjct: 181 RITDVQPGAVYTPMWGKVD-----------DEMQALMMMPEDIAAPVVQAYLQPSRTVVE 229

Query: 243 ETLV--VAGGM 251
           E ++   +G +
Sbjct: 230 EIILRPTSGDI 240

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  144 bits (364), Expect = 7e-43
 Identities = 48/260 (18%), Positives = 99/260 (38%), Gaps = 20/260 (7%)

Query: 7   AKRFQGKVAIVTASTQGIGFGIAERL---GLEGASVVVSSRKQKNVDEAVVKLKAR--GI 61
           A      V ++T +++G G  +A +L      G+ ++VS+R +  + +   +L A+   +
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 62  EVIGVVCHVSNGQQRKNLINQTIE----KFGKIDVVVSNA--AANPSVDSILQTKESVLD 115
           +V+     +      + L++   E    +  +  ++++NA    + S   +     + ++
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 116 KLWDINVKSSILLLQDAAPHLQKGSSVVLI----SSIAGYQPQSSMAMYGVTKTALLGLT 171
             W +N+ S + L        Q    +       SS+   QP     +Y   K A   L 
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 172 KALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDG---VRQTIEQNTLLNRLGTTRDMAAA 228
           + LAAE  P  RV   APG +     +          +R  +++      L      A  
Sbjct: 181 QVLAAE-EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK 239

Query: 229 AAFLASDDASYITGETLVVA 248
              L   D ++ +G  +   
Sbjct: 240 LLGLLQKD-TFQSGAHVDFY 258

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (352), Expect = 6e-41
 Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 15/249 (6%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL-KARGIEVIGV 66
           +  QGK  IVT +++GIG  +A  L   GA VVV++R ++ + + V    +        +
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 69

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              + +    +  + Q  +  G +D+++ N   N S++ +       + K  ++N  S +
Sbjct: 70  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYV 128

Query: 127 LLLQDAAPHL-QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT--- 182
           +L   A P L Q   S+V++SS+AG      +A Y  +K AL G   ++  E +      
Sbjct: 129 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNV 188

Query: 183 RVNCVAPGFVPTHFAEYITSN---------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLA 233
            +     G + T  A    S          +     I +   L +     D +     L 
Sbjct: 189 SITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLI 248

Query: 234 SDDASYITG 242
            + +  I  
Sbjct: 249 RNPSRKILE 257

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (346), Expect = 2e-40
 Identities = 48/251 (19%), Positives = 95/251 (37%), Gaps = 14/251 (5%)

Query: 8   KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV 67
           +  +G VA++T    G+G   AERL  +GAS V+        +    KL    +     V
Sbjct: 1   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV 60

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDS--ILQTKESVLDKLWDINVKSS 125
               + Q    L      +          A A+ + +             ++ D+N+  +
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 120

Query: 126 ILLLQDAAPHL--------QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAE 177
             +++  A  +         +   ++  +S+A ++ Q   A Y  +K  ++G+T  +A +
Sbjct: 121 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 180

Query: 178 MAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD 236
           +AP   RV  +APG   T     +           Q    +RLG   + A     +  + 
Sbjct: 181 LAPIGIRVMTIAPGLFGTPLLTSL-PEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN- 238

Query: 237 ASYITGETLVV 247
             ++ GE + +
Sbjct: 239 -PFLNGEVIRL 248

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  133 bits (336), Expect = 5e-39
 Identities = 34/242 (14%), Positives = 76/242 (31%), Gaps = 25/242 (10%)

Query: 11  QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHV 70
           + +  +V      +G    +        V      +     A V +K             
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTD 50

Query: 71  SNGQQRKNLINQTIEKFG--KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILL 128
           S  +Q   +  +  +  G  K+D ++  A      ++  ++     D +W  ++ +S + 
Sbjct: 51  SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 110

Query: 129 LQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA---PDTRVN 185
              A  HL++G  + L  + A       M  YG+ K A+  L ++LA + +         
Sbjct: 111 SHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAI 170

Query: 186 CVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL 245
            V P  + T           + +        +       +        + +    +G  +
Sbjct: 171 AVLPVTLDT----------PMNRKSMPEADFSSWTPLEFLVETFHDWITGNKRPNSGSLI 220

Query: 246 VV 247
            V
Sbjct: 221 QV 222

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  133 bits (334), Expect = 2e-38
 Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 7/249 (2%)

Query: 9   RFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGV 66
             +GK  ++   A+ + I +GIA+    +GA++  +   +  +++ V  +          
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVY 60

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSV---DSILQTKESVLDKLWDINVK 123
              VS  +  K+L N   +  G +D +V + A  P      S+L+T +S  +   +I+V 
Sbjct: 61  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120

Query: 124 SSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-T 182
           S I L     P L  G+SV+ +S +   +  +   + G+ K AL    + LA ++     
Sbjct: 121 SLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHI 180

Query: 183 RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG 242
           RVN ++ G + T  +  I     + +  E N  L +  +  ++  A  +L S  +S ++G
Sbjct: 181 RVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSG 240

Query: 243 ETLVVAGGM 251
           E   V  G 
Sbjct: 241 EVHFVDAGY 249

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (320), Expect = 3e-36
 Identities = 54/280 (19%), Positives = 94/280 (33%), Gaps = 67/280 (23%)

Query: 13  KVAIVTASTQGIGFGIAERLG-LEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
            VA+VT   +GIG  I   L  L    VV+++R       AV +L+A G+        + 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
           + Q  + L +   +++G +DV+V+NA     V +         +     N   +  +  +
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKV-ADPTPFHIQAEVTMKTNFFGTRDVCTE 122

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAM-------------------------------- 159
             P ++    VV +SSI   +   S +                                 
Sbjct: 123 LLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 182

Query: 160 ---------YGVTKTALLGLTKALAAEMAPDT-----RVNCVAPGFVPTHFAEYITSNDG 205
                    YGVTK  +  L++  A +++         +N   PG+V T  A        
Sbjct: 183 QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP------ 236

Query: 206 VRQTIEQNTLLNRLGTTRDMAAAAAFLA--SDDASYITGE 243
                          +  + A    +LA    DA    G+
Sbjct: 237 -----------KATKSPEEGAETPVYLALLPPDAEGPHGQ 265

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  125 bits (315), Expect = 7e-36
 Identities = 45/243 (18%), Positives = 77/243 (31%), Gaps = 23/243 (9%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
           GKV IV      +G  I E     G +V+                    I V G      
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSAN-------DQADSNILVDGNKNWTE 54

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
             Q        +  +  ++D V   A       +  +      D +   +V SS +  + 
Sbjct: 55  QEQSILEQT-ASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKL 113

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA---PDTRVNCVA 188
           A  HL+ G  + L  + A   P  SM  YG+ K A+  LT +LAA+ +    ++ V  + 
Sbjct: 114 ATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIM 173

Query: 189 PGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMA-AAAAFLASDDASYITGETLVV 247
           P  + T                  N   +       ++     +     +   +G  L +
Sbjct: 174 PVTLDTPMNRKWMP----------NADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKI 223

Query: 248 AGG 250
              
Sbjct: 224 TTE 226

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  118 bits (296), Expect = 1e-32
 Identities = 56/278 (20%), Positives = 98/278 (35%), Gaps = 42/278 (15%)

Query: 14  VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARG------------ 60
           VA+VT + + +G  IAE L  EG +V +   +      A+   L AR             
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 61  ------IEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKE--- 111
                 +        V+   +   L+      +G+ DV+V+NA++      +   ++   
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 112 ----------SVLDKLWDINVKSSILLLQD--------AAPHLQKGSSVVLISSIAGYQP 153
                     +    L+  N  +   L++          A H     S++ +      QP
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN 213
                +Y + K AL GLT++ A E+AP           +     +             + 
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD--MPPAVWEGHRSKV 241

Query: 214 TLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
            L  R  +  +++    FL S  A YITG  + V GG 
Sbjct: 242 PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 279

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  116 bits (291), Expect = 3e-32
 Identities = 52/272 (19%), Positives = 88/272 (32%), Gaps = 58/272 (21%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
            + +++    GIG    + L   G  +V    +   V                 +  +S 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLST 44

Query: 73  GQQRKNLINQTIEKFGK-IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
            + RK  I   + K  K +D +V  A   P           VL  +  +N   +  L+  
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTK--------VLGNVVSVNYFGATELMDA 96

Query: 132 AAPHL-----------------------------QKGSSVVLISSIAGYQ-PQSSMAMYG 161
             P L                              +        +I  +   Q     Y 
Sbjct: 97  FLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156

Query: 162 VTKTALLGLTKALAAEMA-PDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN-TLLNRL 219
            +K AL    +  AA       R+N +APG   T   +    +    ++I +    + R 
Sbjct: 157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRR 216

Query: 220 GTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
               +MA+  AFL S  ASY+ G  +V+ GG+
Sbjct: 217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (289), Expect = 1e-31
 Identities = 46/261 (17%), Positives = 89/261 (34%), Gaps = 30/261 (11%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV------SSRKQKNVDEAVVKLKARGIEVIGV 66
            V ++T  + GIG  +A RL  + +            + Q  + EA   L      +  +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 67  VCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
              V + +       +  E    +   +   A    +  +    E  +  + D+NV  ++
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDV---LVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119

Query: 127 LLLQDAAPHL--QKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPD-TR 183
            +LQ   P +  +    V++  S+ G        +Y  +K AL GL ++LA  + P    
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVH 179

Query: 184 VNCVAPGFVPTHFAE-YITSNDGVRQTIEQNTL--------------LNRLGTTRDMAAA 228
           ++ +  G V T F E  + S + V    + +T                       ++A  
Sbjct: 180 LSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV 239

Query: 229 AAFLASDD---ASYITGETLV 246
                        Y T E  +
Sbjct: 240 FLTALRAPKPTLRYFTTERFL 260

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  111 bits (277), Expect = 4e-30
 Identities = 43/265 (16%), Positives = 78/265 (29%), Gaps = 18/265 (6%)

Query: 9   RFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIG 65
              GK  +V+   +   I F IA     +GA +V++   +  + + +   L A+   +  
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 66  VVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSS 125
            V +  +       + + I    K+D VV +    P     +              +  S
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHIS 122

Query: 126 ILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA----PD 181
                  A  L    +         + P  +M  Y     A   L               
Sbjct: 123 AYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYG 182

Query: 182 TRVNCVAPGFVPTHFAE----------YITSNDGVRQTIEQNTLLNR-LGTTRDMAAAAA 230
            R N VA G + T                     + +  +Q   +   +     +A    
Sbjct: 183 VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVC 242

Query: 231 FLASDDASYITGETLVVAGGMPSRL 255
            L SD     TG+ +   GG  ++L
Sbjct: 243 ALLSDWLPATTGDIIYADGGAHTQL 267

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  108 bits (271), Expect = 3e-29
 Identities = 39/211 (18%), Positives = 81/211 (38%), Gaps = 28/211 (13%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVV--SSRKQKNVDEAVVKLKARGIEVIGVVCH 69
               +VT + +GIG G+ ++L  +     +  ++R  +   E       +   V  +   
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK---SIKDSRVHVLPLT 59

Query: 70  VSNGQQRKNLINQTIEKFGK--IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           V+  +     +++  E  G   + ++++NA    S  +  +   +V+ +  D+N  S +L
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 128 LLQDAAPHLQKG--------------------SSVVLISSIAGYQPQSSMAMYGVTKTAL 167
           L Q   P L+                      S +  I+       Q  +  Y ++K A+
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 168 LGLTKALAAEMAPD-TRVNCVAPGFVPTHFA 197
               + LA ++  D   V    PG+V T+  
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  109 bits (273), Expect = 3e-29
 Identities = 59/286 (20%), Positives = 102/286 (35%), Gaps = 40/286 (13%)

Query: 4   MKMAKRFQGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI 61
           + +    +GK A +   A   G G+ +A+ L   GA ++V +             + +  
Sbjct: 2   LPI--DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFD 59

Query: 62  E--------------------------------VIGVVCHVSNGQQRKNLINQTIEKFGK 89
           +                                        S+    +       + FG 
Sbjct: 60  QSRVLPDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGS 119

Query: 90  IDVVVSNAAANPSV-DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI 148
           ID++V + A  P V   +L+T           +  S + LL    P +  G + + ++ I
Sbjct: 120 IDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYI 179

Query: 149 AGYQPQSSMAM-YGVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPTHFAEYITSNDG 205
           A  +            K AL   T+ LA E       RVN ++ G + +  A+ I   D 
Sbjct: 180 ASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT 239

Query: 206 VRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM 251
           + +    N  + +  T  ++  AAAFL S  AS ITG T+ V  G+
Sbjct: 240 MIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  106 bits (263), Expect = 1e-27
 Identities = 51/322 (15%), Positives = 101/322 (31%), Gaps = 81/322 (25%)

Query: 11  QGKVAIVT--ASTQGIGFGIAERLGLEGASVVVSSR-----------KQKNVDEAVVKLK 57
              +  +     T G G+GIA+ L      ++               K    D  ++  K
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 58  ARGIEVIGVV---------------------CHVSNGQQRKNLINQTIEKFGKIDVVV-S 95
            + + ++ ++                      ++      +++ N   +K+GKI+++V S
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 96  NAAANPSVDSILQTKESVLDKLWDINVKSSILLLQ-DAAPHLQKGSSVVLISSIAGYQPQ 154
            A A      +L T           +  S I L +        + S + L    +     
Sbjct: 121 LANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVP 180

Query: 155 SSMAMYGVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPTHFAEYIT----------- 201
                    K AL   T+ LA  +  +   R+N ++ G + +  A  I            
Sbjct: 181 GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN 240

Query: 202 --------------------------------SNDGVRQTIEQNTLLNRLGTTRDMAAAA 229
                                             D   +  E+   L +   + D+ + A
Sbjct: 241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVA 300

Query: 230 AFLASDDASYITGETLVVAGGM 251
           +FL S ++  ITG+T+ V  G+
Sbjct: 301 SFLLSRESRAITGQTIYVDNGL 322

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 42/260 (16%), Positives = 83/260 (31%), Gaps = 40/260 (15%)

Query: 13  KVAIVTASTQGIGFGIAERL---GLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCH 69
              ++T   +G+G G+ + L         +  + R ++   + +  L      +  +   
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-KELEDLAKNHSNIHILEID 61

Query: 70  VSNGQ--QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
           + N     +     + + K   ++V+ +NA   P    I   +   L      N    I+
Sbjct: 62  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 121

Query: 128 LLQDAAPHLQKGSSVVLIS-------------SIAGYQ---PQSSMAMYGVTKTALLGLT 171
           L +   P L+K +                   SI G         M  Y  +K+AL   T
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 172 KALAAEMAPD-TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAA 230
           K+L+ ++ P       + PG+V T                  +  L+   +T  +    +
Sbjct: 182 KSLSVDLYPQRIMCVSLHPGWVKTDMG-------------GSSAPLDVPTSTGQIVQTIS 228

Query: 231 FLASDDASYITGETLVVAGG 250
            L         G  +   G 
Sbjct: 229 KLGEKQ----NGGFVNYDGT 244

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 68.2 bits (165), Expect = 2e-14
 Identities = 25/184 (13%), Positives = 58/184 (31%), Gaps = 3/184 (1%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN 72
           +VA++   T  +G G+A RL   G  +VV SR+++  +    + +    +         +
Sbjct: 2   RVALLGG-TGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 73  GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD-KLWDINVKSSILLLQD 131
             +  ++   TI     ID              +          K +  + + S   +  
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVA 120

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPG 190
                +K  S +     A +        + V        +K +   +  +   +  +  G
Sbjct: 121 EVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAG 180

Query: 191 FVPT 194
            +  
Sbjct: 181 PLSN 184

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 57.7 bits (138), Expect = 1e-10
 Identities = 29/183 (15%), Positives = 53/183 (28%), Gaps = 3/183 (1%)

Query: 12  GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS 71
               +VT  T G+G  IA  L   GA  ++   +     +   +L A    +       +
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 72  NGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQD 131
                +  + + +   G    + +   A  ++D       +          K        
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128

Query: 132 AAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGF 191
                   ++ VL SS A       +  Y      L GL +   ++  P      VA G 
Sbjct: 129 ELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDGLP---ATAVAWGT 185

Query: 192 VPT 194
              
Sbjct: 186 WAG 188

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 54.9 bits (131), Expect = 7e-10
 Identities = 25/183 (13%), Positives = 44/183 (24%), Gaps = 17/183 (9%)

Query: 3   KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIE 62
                   +GK A+V A T  +G   A  L  EGA VV+  RK      A   +  R   
Sbjct: 14  VKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR--- 70

Query: 63  VIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINV 122
                  V+             E       V +  A    +       ++       I +
Sbjct: 71  -----FKVNVTAAETADDASRAEAVKGAHFVFTAGAIGLELLP-----QAAWQNESSIEI 120

Query: 123 KSSILLLQDAAP---HLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMA 179
            +                            G      +    + +  +  L ++      
Sbjct: 121 VADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLK-LKLHRACIAKLFESSEGVFD 179

Query: 180 PDT 182
            + 
Sbjct: 180 AEE 182

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 42.9 bits (100), Expect = 2e-05
 Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 27/171 (15%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV-----SSRKQKNVDEAVVKLKARGIEVIGVV 67
           KVA++T  T   G  +AE L  +G  V       SS   + VD           +     
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 68  CHVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSIL 127
             +S+     + + + + +  + D V +  A +    S    +        D++   ++ 
Sbjct: 62  GDLSD----TSNLTRILREV-QPDEVYNLGAMSHVAVSFESPEY-----TADVDAMGTLR 111

Query: 128 LLQDAAPH-LQKGSSVVLISSIAGY-----------QPQSSMAMYGVTKTA 166
           LL+      L+K +     S+   Y            P    + Y V K  
Sbjct: 112 LLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY 162

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 31/194 (15%), Positives = 66/194 (34%), Gaps = 49/194 (25%)

Query: 13  KVAIVTASTQGIGFGIAERLGLEGASVVV----SSRKQKNVDEAVVKLKARGIEVIGVVC 68
           K  ++T     +G  + ++L ++G  V V     + +++NV+  +               
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--------------- 46

Query: 69  HVSNGQQRKNLINQTI--EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSI 126
               G +   LIN  +    + ++D +  + A+  S  + +        K    N   ++
Sbjct: 47  ----GHENFELINHDVVEPLYIEVDQIY-HLASPASPPNYMYNPI----KTLKTNTIGTL 97

Query: 127 LLLQDAAPHLQKGSSVVLISSIAGY----------------QPQSSMAMYGVTKTALLGL 170
            +L  A    + G+ ++L S+   Y                 P    A Y   K     +
Sbjct: 98  NMLGLAK---RVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM 154

Query: 171 TKALAAEMAPDTRV 184
             A   +   + RV
Sbjct: 155 CYAYMKQEGVEVRV 168

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	255
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.92
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.86
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.86
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.85
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.85
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.83
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.83
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.83
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.82
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.81
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.81
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.8
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.8
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.8
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.8
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.79
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.78
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.78
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.76
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.76
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.75
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.73
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.66
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.64
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.53
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.46
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.43
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.43
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.41
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.36
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.34
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.92
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.46
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.45
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.43
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.4
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.38
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.38
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.23
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	98.21
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.21
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.17
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.13
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	98.12
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	98.11
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	98.1
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.07
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.05
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.99
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.93
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.89
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.89
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.84
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.74
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.73
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.69
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.64
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.59
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.57
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.57
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.56
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.56
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.54
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.52
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	97.51
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.5
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.48
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.47
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.44
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	97.44
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.41
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.39
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.32
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.3
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.25
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	97.21
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.2
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.19
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.18
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.18
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.17
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.12
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.11
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	97.09
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.09
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.06
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.06
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.03
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	97.01
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.0
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.98
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.97
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.97
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.96
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.95
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.94
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.91
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.88
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.88
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.87
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.83
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.8
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.79
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	96.79
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.76
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.76
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.76
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.76
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.73
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.68
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.67
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.66
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	96.66
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.65
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.62
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.54
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.53
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.51
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	96.5
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.48
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.47
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.4
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.38
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.35
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.34
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	96.32
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.27
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	96.24
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.18
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	96.13
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.06
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.01
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.0
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.0
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.93
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.82
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	95.8
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.78
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.78
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.74
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.68
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	95.67
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	95.66
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	95.59
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.52
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.37
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.3
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.14
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	95.1
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.98
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	94.94
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	94.94
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.83
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.83
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	94.8
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.7
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.65
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.62
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.62
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.55
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.5
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	94.41
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.32
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.31
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	94.3
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	94.3
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	94.3
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.28
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	94.26
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	94.07
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.05
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.9
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	93.84
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	93.82
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.78
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.75
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.64
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.63
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.61
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	93.61
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.46
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.34
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.33
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.22
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	93.18
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	93.18
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	93.09
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.08
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	93.06
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.04
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.01
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.89
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.69
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.54
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	92.4
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.2
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	92.12
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	91.89
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.71
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	91.41
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	91.39
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.26
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	91.19
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	91.07
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.04
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.0
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	90.97
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	90.97
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.91
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.91
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	90.89
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	90.89
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	90.8
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	90.71
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.65
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	90.61
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.59
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	90.29
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	90.19
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	90.19
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.11
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	90.1
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	89.86
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	89.78
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	89.48
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	89.45
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	89.43
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	89.29
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.07
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	88.99
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	88.94
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.69
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.64
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	88.49
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	88.46
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	88.41
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	88.36
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	88.1
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	87.98
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	87.92
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	87.81
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	87.51
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	87.36
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	87.29
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	87.28
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	87.13
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	87.03
d1t35a_	179	Hypothetical protein YvdD {Bacillus subtilis [TaxI	86.78
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	86.67
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	86.55
d2q4oa1	183	Hypothetical protein At2g37210/T2N18.3 {Thale cres	86.49
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	86.49
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	86.45
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	86.35
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.15
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	86.13
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	85.99
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	85.99
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	85.9
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	85.87
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	85.72
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	85.49
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	85.46
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	85.4
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	85.19
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	85.04
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	85.03
d1ydhb_	181	Hypothetical protein At5g11950 {Thale cress (Arabi	84.99
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	84.99
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	84.94
d1qo0d_	189	Positive regulator of the amidase operon AmiR {Pse	84.57
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	84.54
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	84.52
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.3
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	84.15
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	84.04
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	84.01
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	83.98
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	83.75
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.53
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	83.46
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	83.43
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	83.31
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	83.15
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	83.08
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	83.02
d2h00a1	250	Methyltransferase 10 domain containing protein MET	82.68
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	82.66
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	82.29
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	82.23
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	82.09
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	81.95
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	81.74
d1vlva2	161	Ornithine transcarbamoylase {Thermotoga maritima [	81.38
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	81.32
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	80.93
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	80.78
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	80.75
d2ayxa1	133	Sensor kinase protein RcsC, C-terminal domain {Esc	80.72
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	80.7
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	80.41

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=7e-59  Score=375.64  Aligned_cols=247  Identities=30%  Similarity=0.473  Sum_probs=227.9

Q ss_pred             ccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            4 MKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      .+..+.|+||++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++++|++++++++++++++
T Consensus         2 ~n~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~   81 (251)
T d2c07a1           2 ENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKI   81 (251)
T ss_dssp             CCCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            35567899999999999999999999999999999999999999999999999888889999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhH
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      .+++|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.|+||++||..+..+.+...+|+
T Consensus        82 ~~~~g~iDilvnnag~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~  160 (251)
T d2c07a1          82 LTEHKNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYS  160 (251)
T ss_dssp             HHHCSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HHhcCCceeeeecccccc-ccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHH
Confidence            999999999999999876 67888999999999999999999999999999985  678999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +||+|+++|+|+++.|+.+ |||||+|+||+++|++....  .++..+......|++|+++|+|+++++.||+|+.++++
T Consensus       161 asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~i  238 (251)
T d2c07a1         161 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYI  238 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence            9999999999999999998 99999999999999998755  45666778888999999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 025273          241 TGETLVVAGGMPS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      |||+|.+|||++.
T Consensus       239 tG~~i~vDGG~sp  251 (251)
T d2c07a1         239 NGRVFVIDGGLSP  251 (251)
T ss_dssp             CSCEEEESTTSCC
T ss_pred             cCcEEEECCCcCc
Confidence            9999999999863

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.3e-58  Score=373.84  Aligned_cols=245  Identities=33%  Similarity=0.517  Sum_probs=228.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+|+||++|||||++|||+++++.|+++|++|++++|+.++++...+++.+. +.++.+++||++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999888887554 778999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCcc-CCCCCChhhHhh
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGY-QPQSSMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~-~~~~~~~~y~~s  163 (255)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++|.++|+|+  +.|+||+++|..+. .+.+...+|+++
T Consensus        81 ~g~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~as  159 (251)
T d1vl8a_          81 FGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAAS  159 (251)
T ss_dssp             HSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHH
Confidence            999999999999865 68899999999999999999999999999999996  46799999997664 467788999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|+++|+|+++.|+.+ |||||+|+||+++|++.......++..+......|++|+++|+|+|+++.||+|+.++++||
T Consensus       160 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~itG  239 (251)
T d1vl8a_         160 KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTG  239 (251)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCcC
Confidence            99999999999999998 99999999999999999888777777788888899999999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      |+|.+|||++.
T Consensus       240 ~~i~vDGG~ta  250 (251)
T d1vl8a_         240 QIIFVDGGWTA  250 (251)
T ss_dssp             CEEEESTTGGG
T ss_pred             cEEEeCcCeeC
Confidence            99999999875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.9e-58  Score=374.84  Aligned_cols=247  Identities=32%  Similarity=0.435  Sum_probs=229.6

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      |..+|+||++|||||++|||++++++|+++|++|++++|+.+ .++.+.+++...+.++.+++||++++++++++++++.
T Consensus         1 M~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            445799999999999999999999999999999999999854 6778888888888899999999999999999999999


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhhH
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      +++|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+   .+++|+++||.++..+.+...+|+
T Consensus        81 ~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~  159 (261)
T d1geea_          81 KEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA  159 (261)
T ss_dssp             HHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHhCCCCEeeccceecC-CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccc
Confidence            99999999999999876 57899999999999999999999999999999985   244699999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      ++|+|+++|+|+++.|+.+ |||||+|+||+++|++.......++.........|++|+++|+|+|+++.||+|+.++++
T Consensus       160 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~i  239 (261)
T d1geea_         160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYV  239 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             cCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCC
Confidence            9999999999999999999 999999999999999987776667777778888999999999999999999999999999


Q ss_pred             cccEEEeCCCccc
Q 025273          241 TGETLVVAGGMPS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      |||+|.+|||++.
T Consensus       240 tG~~i~vDGG~sl  252 (261)
T d1geea_         240 TGITLFADGGMTL  252 (261)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCeEEECCCeeC
Confidence            9999999999864

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.9e-58  Score=372.69  Aligned_cols=245  Identities=31%  Similarity=0.470  Sum_probs=227.8

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++|+||++|||||++|||++++++|+++|++|++++|+.++++.+.+++...+.++.+++||++++++++++++++.+++
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||+.. ..++ +.+.++|++++++|+.+++.+++.++|+|+  ++++||++||..+..+.+...+|+++|+
T Consensus        87 g~iDilvnnAG~~~-~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKa  164 (255)
T d1fmca_          87 GKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA  164 (255)
T ss_dssp             SSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCCCEeeeCCcCCC-CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHH
Confidence            99999999999875 3444 789999999999999999999999999986  5779999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      |+.+|+|++|.|+.+ |||||+|+||+++|++...... ++..+......|++|+++|+|+|+++.||+|+.++++|||+
T Consensus       165 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~  243 (255)
T d1fmca_         165 AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQI  243 (255)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC-HHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCE
Confidence            999999999999988 9999999999999998876543 45566677888999999999999999999999999999999


Q ss_pred             EEeCCCcccCC
Q 025273          245 LVVAGGMPSRL  255 (255)
Q Consensus       245 i~~dgG~~~~~  255 (255)
                      |.+|||...+|
T Consensus       244 i~vDGG~~~~l  254 (255)
T d1fmca_         244 LTVSGGGVQEL  254 (255)
T ss_dssp             EEESTTSCCCC
T ss_pred             EEECcCccccC
Confidence            99999987664

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=3.7e-58  Score=372.66  Aligned_cols=246  Identities=27%  Similarity=0.403  Sum_probs=225.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +|+||++|||||++|||+++++.|+++|++|++++|+.+.++...+++...  +.++.+++||++++++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999888887654  558999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      ||++|+||||||+.....++++.+.++|++++++|+.++++++|+++|+|+  +.|+||++||..+..+.+...+|+++|
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  160 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK  160 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHH
Confidence            999999999999876667899999999999999999999999999999986  678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC------ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS------NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +|+.+|+|+|+.|+.+ |||||+|+||+++|++......      .....+.+....|++|+++|+|+|+.+.||+|+.+
T Consensus       161 aal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s  240 (258)
T d1iy8a_         161 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA  240 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            9999999999999998 9999999999999998765431      23344556677899999999999999999999999


Q ss_pred             CCccccEEEeCCCcccC
Q 025273          238 SYITGETLVVAGGMPSR  254 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~~  254 (255)
                      +++|||+|.+|||++..
T Consensus       241 ~~itG~~i~VDGG~saa  257 (258)
T d1iy8a_         241 SYVNATVVPIDGGQSAA  257 (258)
T ss_dssp             TTCCSCEEEESTTTTTB
T ss_pred             cCCcCceEEcCcchhcc
Confidence            99999999999999753

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=9.6e-58  Score=370.58  Aligned_cols=246  Identities=33%  Similarity=0.502  Sum_probs=228.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++|+||++|||||++|||+++++.|+++|++|++++|+.++++.+.+++...+.++.+++||++++++++++++++.+++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            57999999999999999999999999999999999999999999999998888899999999999999999999999998


Q ss_pred             C-CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           88 G-KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 g-~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      + ++|++|||||+.. ..++.+.+.++|++++++|+.+++.+++.++|+|+  +.|+||++||..+..+.+....|+++|
T Consensus        84 ~~~idilvnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  162 (259)
T d2ae2a_          84 HGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK  162 (259)
T ss_dssp             TTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCceEEEECCceec-cCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHH
Confidence            6 8999999999876 67899999999999999999999999999999986  578999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCCh---hHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSND---GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +|+++|+|+++.|+.+ +||||+|+||+++|++.......+   +.........|++|+++|+|++++++||+|+.++++
T Consensus       163 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~i  242 (259)
T d2ae2a_         163 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV  242 (259)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence            9999999999999998 999999999999999987665543   233456677899999999999999999999999999


Q ss_pred             cccEEEeCCCcccC
Q 025273          241 TGETLVVAGGMPSR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      |||+|.+|||+...
T Consensus       243 tG~~i~VDGG~~a~  256 (259)
T d2ae2a_         243 TGQIIYVDGGLMAN  256 (259)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             cCcEEEECCCeEee
Confidence            99999999998753

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=7.3e-58  Score=371.90  Aligned_cols=244  Identities=30%  Similarity=0.461  Sum_probs=215.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc-hhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ-KNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      |+||++|||||++|||+++|++|+++|++|++++|+. +.++.+.+++... +.++.+++||++++++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999974 5677777777554 7799999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||+.. ..++++.+.++|++++++|+.++++++++++|+|+  +.|+||++||..+..+.+.+.+|++||+
T Consensus        82 G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1x1ta1          82 GRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCcEEEeeccccc-CCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhh
Confidence            99999999999876 67899999999999999999999999999999996  5689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC----------hhHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      |+.+|+|+++.|+.+ |||||+|+||+++|++.......          ....+.+....|++|+++|+|+|+++.||+|
T Consensus       161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S  240 (260)
T d1x1ta1         161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred             hHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999998 99999999999999987655321          1222345677899999999999999999999


Q ss_pred             CCCCCccccEEEeCCCcccC
Q 025273          235 DDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +.++++|||+|.+|||++.|
T Consensus       241 ~~a~~itG~~i~vDGG~tar  260 (260)
T d1x1ta1         241 DAAAQITGTTVSVDGGWTAR  260 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             hhhCCCcCCEEEECcchhcC
Confidence            99999999999999999875

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.1e-57  Score=367.78  Aligned_cols=242  Identities=32%  Similarity=0.462  Sum_probs=208.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +|+||++|||||++|||+++++.|+++|++|++++|++.+  ...+.+...+.++.+++||++++++++++++++.+++|
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999998754  34455666688999999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+  +.|+||++||..+..+.+...+|++||+|
T Consensus        80 ~iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  158 (247)
T d2ew8a1          80 RCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAA  158 (247)
T ss_dssp             CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhcc
Confidence            9999999999876 68899999999999999999999999999999996  56899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      +.+|+|+++.|+.+ |||||+|+||+++|++..................+++|+++|+|+++.+.||+|+.++++|||+|
T Consensus       159 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i  238 (247)
T d2ew8a1         159 NIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTL  238 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            99999999999998 99999999999999998766544444444444568899999999999999999999999999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||+..
T Consensus       239 ~vDGG~~~  246 (247)
T d2ew8a1         239 AVDGGMVR  246 (247)
T ss_dssp             EESSSCCC
T ss_pred             EECCCEec
Confidence            99999864

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.7e-58  Score=368.87  Aligned_cols=239  Identities=32%  Similarity=0.516  Sum_probs=222.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +|+||++|||||++|||+++++.|+++|++|++++|+++.++.+.+++.   .+..+++||++++++++++++++.+++|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            5899999999999999999999999999999999999999888887774   4778899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.++|+++|+|+  +.|+||++||..+..+.+...+|++||+|
T Consensus        78 ~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  156 (243)
T d1q7ba_          78 EVDILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG  156 (243)
T ss_dssp             SCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             Ccceehhhhhhcc-ccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence            9999999999876 67899999999999999999999999999999995  57899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++|+|+++.|+.+ |||||+|+||+++|++....  .++.........|++|+++|+|+|+.+.||+|+.++++|||+|
T Consensus       157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i  234 (243)
T d1q7ba_         157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  234 (243)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecceEechhhhhh--hhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            99999999999998 99999999999999988765  3444566777889999999999999999999999999999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||.+.
T Consensus       235 ~vdGG~~~  242 (243)
T d1q7ba_         235 HVNGGMYM  242 (243)
T ss_dssp             EESTTSSC
T ss_pred             EECCCeEe
Confidence            99999863

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.2e-57  Score=368.47  Aligned_cols=240  Identities=29%  Similarity=0.439  Sum_probs=223.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ||++|||||++|||++++++|+++|++|++++|+++.++.+.+++...+.++.+++||++++++++++++++.++||++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999999999999999999999999988888999999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc----CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ----KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~----~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|.    +.++||++||..+..+.+.+.+|+++|+|+
T Consensus        82 ilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal  160 (257)
T d2rhca1          82 VLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV  160 (257)
T ss_dssp             EEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             EEEecccccC-CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHH
Confidence            9999999876 68899999999999999999999999999999752    457999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc---------CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT---------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      .+|+|+|+.|+.+ |||||+|+||+++|+|.....         ..++..+.+....|++|+++|+|+++++.||+|+.+
T Consensus       161 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s  240 (257)
T d2rhca1         161 VGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA  240 (257)
T ss_dssp             HHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            9999999999998 999999999999999876542         234555667788899999999999999999999999


Q ss_pred             CCccccEEEeCCCcc
Q 025273          238 SYITGETLVVAGGMP  252 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~  252 (255)
                      +++|||+|.+|||+.
T Consensus       241 ~~itG~~i~vDGG~~  255 (257)
T d2rhca1         241 AAVTAQALNVCGGLG  255 (257)
T ss_dssp             TTCCSCEEEESTTCC
T ss_pred             cCCcCceEEECcCcc
Confidence            999999999999985

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1.8e-57  Score=369.25  Aligned_cols=242  Identities=28%  Similarity=0.499  Sum_probs=225.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +|+||++|||||++|||+++++.|+++|++|++++|+.+.++.+.+++...+.++.+++||++++++++++++++.+++|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            48999999999999999999999999999999999999999999999988888999999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|++|||||......++.+.+.++|++++++|+.+++.++++++|+|+  +.|+||++||..+..+.+.+.+|+++|+|
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  161 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGA  161 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHH
Confidence            9999999999876567899999999999999999999999999999985  67899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc--------------CChhHHHHHHhhcccCCCCCHHHHHHHHHH
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT--------------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAF  231 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  231 (255)
                      +++|+|+++.|+.+ |||||+|+||+++|++.....              ..+...+.+....|++|+++|+|+++++.|
T Consensus       162 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~f  241 (260)
T d1zema1         162 IIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF  241 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHH
T ss_pred             HHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999998 999999999999999863321              123445566778899999999999999999


Q ss_pred             hcCCCCCCccccEEEeCCC
Q 025273          232 LASDDASYITGETLVVAGG  250 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG  250 (255)
                      |+|+.++++|||+|.+|||
T Consensus       242 L~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         242 LLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHSGGGTTCCSCEEEESCC
T ss_pred             HhCchhcCccCCeEEeCCC
Confidence            9999999999999999998

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.4e-57  Score=369.51  Aligned_cols=245  Identities=31%  Similarity=0.477  Sum_probs=196.5

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++|+||++|||||++|||+++++.|+++|++|++++|++++++.+.+++...+.++.+++||++++++++++++++.++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             h-CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           87 F-GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        87 ~-g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      + |++|+||||||... ..++.+.+.++|++++++|+.+++.++|.++|+|+  +.|+||++||..+..+.+....|+++
T Consensus        83 ~~g~idilvnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as  161 (259)
T d1xq1a_          83 FGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT  161 (259)
T ss_dssp             HTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred             hCCCcccccccccccC-CCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccc
Confidence            8 78999999999876 57889999999999999999999999999999996  57899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|+.+|+|+++.|+.+ |||||+|+||+++|++...... ++..+......|++|+++|+|+|+++.||+|+.++++||
T Consensus       162 Kaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG  240 (259)
T d1xq1a_         162 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD-DEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITG  240 (259)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGGGTTCCS
T ss_pred             ccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhch-HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence            99999999999999998 9999999999999999876543 334555667789999999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      ++|.+|||++.
T Consensus       241 ~~i~vDGG~s~  251 (259)
T d1xq1a_         241 QTICVDGGLTV  251 (259)
T ss_dssp             CEEECCCCEEE
T ss_pred             cEEEeCCCEEC
Confidence            99999999864

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=3.7e-57  Score=366.67  Aligned_cols=241  Identities=26%  Similarity=0.459  Sum_probs=221.7

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .|+||++|||||++|||+++++.|+++|++|++++|+.+.++.+.+++   +.++.+++||++++++++++++++.+++|
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            489999999999999999999999999999999999998888877766   56899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcc-c--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-Q--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++|+||||||+.. ..++.+.+.++|++.+++|+.|++.++++++|.| +  ++++||++||..+..+.+...+|+++|+
T Consensus        79 ~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  157 (256)
T d1k2wa_          79 SIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKA  157 (256)
T ss_dssp             CCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CccEEEeeccccc-ccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhh
Confidence            9999999999876 6789999999999999999999999999999875 3  4689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc---------CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT---------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      |+++|+|+++.|+.+ |||||+|+||+++|++.....         ..+..........|++|+++|+|+|+++.||+|+
T Consensus       158 al~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~  237 (256)
T d1k2wa_         158 AVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATP  237 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSG
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999 999999999999999875442         2344556677788999999999999999999999


Q ss_pred             CCCCccccEEEeCCCccc
Q 025273          236 DASYITGETLVVAGGMPS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      .++++|||+|.+|||.+.
T Consensus       238 ~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         238 EADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             GGTTCCSCEEEESTTSSC
T ss_pred             hhCCccCceEEECcchhh
Confidence            999999999999999875

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=5.6e-57  Score=364.44  Aligned_cols=244  Identities=27%  Similarity=0.438  Sum_probs=222.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+|+||++|||||++|||+++++.|+++|++|++++|+.+.++.+.+++.. +.++.+++||++++++++++++++.++|
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            358999999999999999999999999999999999999999988888753 5689999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC---CCeEEEEcccCccCCCCCChhhHhhH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK---GSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|+||||||... ..++.+.+.++|++++++|+.++++++++++|+|++   +++||++||..+..+.+....|+++|
T Consensus        81 G~iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asK  159 (251)
T d1zk4a1          81 GPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             SSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCceEEEecccccc-ccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHH
Confidence            99999999999876 678999999999999999999999999999999963   45899999999999999999999999


Q ss_pred             HHHHHHHHHHHHH--hCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          165 TALLGLTKALAAE--MAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       165 ~a~~~l~~~la~e--~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +|+.+|+|+++.|  +.+ |||||+|+||+++|++.......+ .........|++|+++|+|+++++.||+|+.++++|
T Consensus       160 aal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~-~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~it  238 (251)
T d1zk4a1         160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE-EAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFAT  238 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH-HHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH-HHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCc
Confidence            9999999999999  456 999999999999999987664433 333445567999999999999999999999999999


Q ss_pred             ccEEEeCCCcccC
Q 025273          242 GETLVVAGGMPSR  254 (255)
Q Consensus       242 G~~i~~dgG~~~~  254 (255)
                      ||+|.+|||++.+
T Consensus       239 G~~i~vDGG~ta~  251 (251)
T d1zk4a1         239 GSEFVVDGGYTAQ  251 (251)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CcEEEECcccccC
Confidence            9999999999764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1e-56  Score=360.73  Aligned_cols=236  Identities=28%  Similarity=0.419  Sum_probs=217.8

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..|+||++|||||++|||+++++.|+++|++|++++|++++++.+.+++.   .+..+++||++++++++++++++.+++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999999999999999988888777663   578889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||... ..++++.+.++|++++++|+.+++++++.+.|.|+  +.++||++||..+..+.+....|+++|+
T Consensus        79 g~idilinnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  157 (244)
T d1nffa_          79 GGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF  157 (244)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCeEEEECCcccC-CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHH
Confidence            99999999999876 67899999999999999999999999999999986  5789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      |+++|+|+++.|+.+ |||||+|+||+++|++.......       ....|++|+++|+|+|+++.||+|+.++++|||+
T Consensus       158 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-------~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~  230 (244)
T d1nffa_         158 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAE  230 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-------CSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-------HHhccccCCCCHHHHHHHHHHHhChhhCCCcCCE
Confidence            999999999999998 99999999999999997654332       2346889999999999999999999999999999


Q ss_pred             EEeCCCcccC
Q 025273          245 LVVAGGMPSR  254 (255)
Q Consensus       245 i~~dgG~~~~  254 (255)
                      |.+|||+...
T Consensus       231 i~vDGG~~ag  240 (244)
T d1nffa_         231 FVVDGGTVAG  240 (244)
T ss_dssp             EEESTTGGGS
T ss_pred             EEECCCeecc
Confidence            9999998764

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1.9e-56  Score=362.45  Aligned_cols=240  Identities=32%  Similarity=0.459  Sum_probs=222.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||++|||++++++|+++|++|++++|++++++.+.+++...+.++.+++||++++++++++++++.++||++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            77899999999999999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      ||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|.   ++++|+++||..+..+.+....|+++|+|+++
T Consensus        82 lVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  160 (255)
T d1gega_          82 IVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  160 (255)
T ss_dssp             EEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEecccccc-cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence            999999865 68899999999999999999999999999999874   45789999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccC---------ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS---------NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      |+|+++.|+.+ |||||+|+||+++|++......         .......+....|++|+++|+|+|+++.||+|+.+++
T Consensus       161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~  240 (255)
T d1gega_         161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY  240 (255)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999 9999999999999998765432         2334455667789999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      +||++|.+|||+..
T Consensus       241 itG~~i~vDGG~~~  254 (255)
T d1gega_         241 MTGQSLLIDGGMVF  254 (255)
T ss_dssp             CCSCEEEESSSSSC
T ss_pred             ccCcEEEecCCEEe
Confidence            99999999999864

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-57  Score=363.97  Aligned_cols=241  Identities=32%  Similarity=0.485  Sum_probs=218.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+|+||++|||||++|||+++++.|+++|++|++++|+++.++.+.+++    .+..+++||++++++++++++++.+++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            3689999999999999999999999999999999999988877766554    467889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      |++|+||||||+.....++++.+.++|++++++|+.+++.++++++|+|+ .+|+||++||..+..+.+...+|+++|+|
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  157 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGA  157 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHHHhh
Confidence            99999999999876567788999999999999999999999999999997 45899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC----ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +.+|+|+++.|+.+ |||||+|+||+++|++......    ............|++|+++|+|+++++.||+|+ ++++|
T Consensus       158 l~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~it  236 (250)
T d1ydea1         158 VTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCT  236 (250)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTCC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCCCc
Confidence            99999999999998 9999999999999998765532    123344455567999999999999999999986 78999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      ||+|.+|||++.
T Consensus       237 G~~i~vDGG~~l  248 (250)
T d1ydea1         237 GIELLVTGGAEL  248 (250)
T ss_dssp             SCEEEESTTTTS
T ss_pred             CCeEEECCCccc
Confidence            999999999864

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.4e-56  Score=361.16  Aligned_cols=240  Identities=30%  Similarity=0.463  Sum_probs=214.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .|+||++|||||++|||+++++.|+++|++|++++|+++..+ ..+++     ...+++||++++++++++++++.+++|
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----GGAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            489999999999999999999999999999999999987543 33333     234679999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|+||||||... ..++.+.+.++|++++++|+.++++++++++|+|+  +.++||++||..+..+.+...+|+++|+|
T Consensus        76 ~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  154 (248)
T d2d1ya1          76 RVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG  154 (248)
T ss_dssp             CCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred             CCCeEEEeCcCCC-CCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence            9999999999876 57899999999999999999999999999999996  46799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC----ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +++|+|+++.|+.+ |||||+|+||+++|++......    .+...+......|++|+++|+|+++.+.||+|+.++++|
T Consensus       155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~it  234 (248)
T d2d1ya1         155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT  234 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCC
Confidence            99999999999999 9999999999999998765432    234445667778999999999999999999999999999


Q ss_pred             ccEEEeCCCcccCC
Q 025273          242 GETLVVAGGMPSRL  255 (255)
Q Consensus       242 G~~i~~dgG~~~~~  255 (255)
                      ||+|.+|||++.++
T Consensus       235 G~~i~vDGG~tas~  248 (248)
T d2d1ya1         235 GAILPVDGGMTASF  248 (248)
T ss_dssp             SCEEEESTTGGGBC
T ss_pred             CcEEEcCcCccccC
Confidence            99999999998653

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.9e-56  Score=357.44  Aligned_cols=236  Identities=28%  Similarity=0.416  Sum_probs=213.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +|+||++|||||++|||++++++|+++|++|++++|++++++...+++     +..+++||++++++++++++++.+++|
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g   76 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHLG   76 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999999988877766544     456789999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      ++|+||||||+.. ..++.+.+.++|++++++|+.+++.++|+++|+|++  .+.++++|| .+..+.++..+|+++|+|
T Consensus        77 ~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKaa  154 (242)
T d1ulsa_          77 RLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAG  154 (242)
T ss_dssp             SCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHHH
T ss_pred             CceEEEECCcccc-cCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHHH
Confidence            9999999999876 588999999999999999999999999999999963  345555555 567788899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++|+|+++.|+.+ |||||+|+||+++|++....  .+...+......|++|+++|+|+++.+.||+|+.++++||++|
T Consensus       155 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i  232 (242)
T d1ulsa_         155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVL  232 (242)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcEE
Confidence            99999999999998 99999999999999998654  4556677788899999999999999999999999999999999


Q ss_pred             EeCCCccc
Q 025273          246 VVAGGMPS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||++.
T Consensus       233 ~vDGG~t~  240 (242)
T d1ulsa_         233 FVDGGRTI  240 (242)
T ss_dssp             EESTTTTT
T ss_pred             EECCCccC
Confidence            99999864

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=6.9e-57  Score=363.77  Aligned_cols=240  Identities=27%  Similarity=0.368  Sum_probs=218.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+|+||++|||||++|||++++++|+++|++|++++|+.++++.+.+++   +.++.+++||++++++++++++++.+++
T Consensus         1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            3689999999999999999999999999999999999998877766554   5689999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+  +.|+||++||..+..+.+....|++||+
T Consensus        78 g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  156 (254)
T d1hdca_          78 GSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKW  156 (254)
T ss_dssp             SCCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCccEEEecCcccc-ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHH
Confidence            99999999999876 68899999999999999999999999999999986  5789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCC-CHHHHHHHHHHhcCCCCCCcccc
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLG-TTRDMAAAAAFLASDDASYITGE  243 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~a~~~~~l~s~~~~~~~G~  243 (255)
                      |+.+|+|+|+.|+.+ |||||+|+||+++|++........  .+......|++|++ +|+|+|+++.||+|+.++++|||
T Consensus       157 al~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~--~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~  234 (254)
T d1hdca_         157 GVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ--GEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGA  234 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC--STTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHH--HHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCc
Confidence            999999999999998 999999999999999886554322  23344567889987 69999999999999999999999


Q ss_pred             EEEeCCCccc
Q 025273          244 TLVVAGGMPS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      +|.+|||++.
T Consensus       235 ~i~vDGG~t~  244 (254)
T d1hdca_         235 ELAVDGGWTT  244 (254)
T ss_dssp             EEEESTTTTT
T ss_pred             eEEeCCCccC
Confidence            9999999864

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3.2e-56  Score=358.39  Aligned_cols=237  Identities=30%  Similarity=0.486  Sum_probs=220.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ++||||||++|||++++++|+++|++|++.+ |+.+.++.+.+++...+.++.+++||++++++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999999999875 567778888888888888999999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      +||||||... ..++.+.+.++|++++++|+.++++++++++|+|+  +.|+||++||..+..+.+....|+++|+|+.+
T Consensus        82 iLVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  160 (244)
T d1edoa_          82 VVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             EEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             cccccccccc-ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence            9999999876 67899999999999999999999999999999995  67899999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhc-CCCCCCccccEEEe
Q 025273          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA-SDDASYITGETLVV  247 (255)
Q Consensus       170 l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~-s~~~~~~~G~~i~~  247 (255)
                      |+|+|+.|+.+ |||||+|+||+++|++....  .++..+......|++|+++|+|+++++.||+ |+.++++|||+|.+
T Consensus       161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~v  238 (244)
T d1edoa_         161 FSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTI  238 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEE
T ss_pred             ChHHHHHHHhhhCcEEEEEecceeccHHHHHh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEe
Confidence            99999999988 99999999999999988765  4556677778889999999999999999996 88999999999999


Q ss_pred             CCCcc
Q 025273          248 AGGMP  252 (255)
Q Consensus       248 dgG~~  252 (255)
                      |||+.
T Consensus       239 dGG~s  243 (244)
T d1edoa_         239 DGGIA  243 (244)
T ss_dssp             STTTT
T ss_pred             CCCee
Confidence            99986

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.8e-56  Score=356.31  Aligned_cols=231  Identities=29%  Similarity=0.492  Sum_probs=205.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..|+||++|||||++|||++++++|+++|++|++++|+.+.++           ++..++||++++++++++++++.+++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----------GLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-----------CceEEEEecCCHHHHHHHHHHHHHhc
Confidence            4589999999999999999999999999999999999976533           56779999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|+||||||+.. ..++.+.+.++|++++++|+.+++.+++.++|.|+  +.++||++||..+..+.+...+|++||+
T Consensus        72 g~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  150 (237)
T d1uzma1          72 GPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA  150 (237)
T ss_dssp             SSCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred             CCceEEEeeecccc-cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHH
Confidence            99999999999876 67899999999999999999999999999999986  5679999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      |+++|+|+++.|+.+ |||||+|+||+++|++.+..  .+..........|++|+++|+|+|+++.||+|++.+++|||+
T Consensus       151 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~  228 (237)
T d1uzma1         151 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAV  228 (237)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCe
Confidence            999999999999998 99999999999999998765  455566777888999999999999999999999999999999


Q ss_pred             EEeCCCcc
Q 025273          245 LVVAGGMP  252 (255)
Q Consensus       245 i~~dgG~~  252 (255)
                      |.+|||+.
T Consensus       229 i~vdGG~~  236 (237)
T d1uzma1         229 IPVDGGMG  236 (237)
T ss_dssp             EEESTTTT
T ss_pred             EEECCCCC
Confidence            99999975

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.2e-56  Score=356.70  Aligned_cols=236  Identities=25%  Similarity=0.377  Sum_probs=217.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +|+||++|||||++|||++++++|+++|++|++++|+.++++.+.+++    ..+..++||++++++++++++    ++|
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~----~~g   73 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GIG   73 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHH----HcC
Confidence            589999999999999999999999999999999999988877766654    356788999999999877664    578


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      ++|+||||||+.. ..++.+.+.++|++.+++|+.+++.+++.+.|.|.   .+++||++||..+..+.+....|+++|+
T Consensus        74 ~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKa  152 (242)
T d1cyda_          74 PVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKG  152 (242)
T ss_dssp             CCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCeEEEECCcccc-chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHH
Confidence            9999999999866 67899999999999999999999999999999753   4689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      |+.+|+|+++.|+.+ |||||+|+||+++|++.......++.........|++|+++|+|+++.+.||+|+.++++|||+
T Consensus       153 al~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG~~  232 (242)
T d1cyda_         153 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGG  232 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSE
T ss_pred             HHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCce
Confidence            999999999999999 9999999999999999988887788888888899999999999999999999999999999999


Q ss_pred             EEeCCCccc
Q 025273          245 LVVAGGMPS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      |.+|||+..
T Consensus       233 i~vDGG~~a  241 (242)
T d1cyda_         233 ILVDAGYLA  241 (242)
T ss_dssp             EEESTTGGG
T ss_pred             EEeCcchhc
Confidence            999999875

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-56  Score=356.51  Aligned_cols=239  Identities=28%  Similarity=0.388  Sum_probs=218.4

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      |+..|+||++|||||++|||++++++|+++|++|++++|+.++++.+.+++    ..+..+++|++++++++++++    
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~----   72 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PGIEPVCVDLGDWEATERALG----   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHH----
Confidence            344589999999999999999999999999999999999998888776655    356788999999999887664    


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcc-c--CCCeEEEEcccCccCCCCCChhhHh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHL-Q--KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~--~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      ++|++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.| +  +.++||++||..+..+.+....|++
T Consensus        73 ~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~a  151 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCS  151 (244)
T ss_dssp             TCCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HhCCceEEEecccccc-ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhh
Confidence            5789999999999876 6889999999999999999999999999999965 3  4689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ||+|+++|+|+++.|+.+ |||||+|+||+++|++...........+......|++|+++|+|+|+.+.||+|+.++++|
T Consensus       152 sKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~it  231 (244)
T d1pr9a_         152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTT  231 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcC
Confidence            999999999999999998 9999999999999999988777777777788889999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      ||+|.+|||++.
T Consensus       232 G~~i~vDGG~~A  243 (244)
T d1pr9a_         232 GSTLPVEGGFWA  243 (244)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECccHhh
Confidence            999999999863

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=5e-55  Score=354.16  Aligned_cols=245  Identities=32%  Similarity=0.496  Sum_probs=223.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++|+||+||||||++|||++++++|+++|++|++++|++++++.+.+++...+..+.+++||++++++++++++++.+++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999999999999999998888899999999999999999999999998


Q ss_pred             -CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhH
Q 025273           88 -GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTK  164 (255)
Q Consensus        88 -g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK  164 (255)
                       +.+|+||||||... ..++.+.+.++|++++++|+.+++.+.+++.|.|+  +.++||++||..+..+.+.+..|+++|
T Consensus        82 ~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  160 (258)
T d1ae1a_          82 DGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK  160 (258)
T ss_dssp             TSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEeccccccc-cCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHH
Confidence             68999999999876 57899999999999999999999999999999986  678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC----ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS----NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +|+++|+|.+++|+.+ +||||+|+||+++|++......    ..+..+.+....|++|+++|+|+|++++||+|+++++
T Consensus       161 ~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~  240 (258)
T d1ae1a_         161 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY  240 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCC
Confidence            9999999999999999 9999999999999998766543    3456667777889999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      +||++|.+|||+..
T Consensus       241 itG~~i~vDGG~s~  254 (258)
T d1ae1a_         241 ITGQIIWADGGFTA  254 (258)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCcEEEeCCCeec
Confidence            99999999999875

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.4e-56  Score=358.87  Aligned_cols=241  Identities=24%  Similarity=0.312  Sum_probs=217.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+|+||++|||||++|||+++++.|+++|++|++++|+++.++.+.+++   +.+..+++||++++++++++++++.+++
T Consensus         2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            4589999999999999999999999999999999999999888887776   5678899999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                      |++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+ ++|+||++||..+..+.+...+|+++|+|
T Consensus        79 g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  157 (253)
T d1hxha_          79 GTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCeEEecccccC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHH
Confidence            99999999999876 57889999999999999999999999999999997 57899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC---CeeEEEEeCCcccCCccccccCCh---hHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          167 LLGLTKALAAEMAP---DTRVNCVAPGFVPTHFAEYITSND---GVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       167 ~~~l~~~la~e~~~---~v~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +.+|+|+++.|+.+   +||||+|+||+++|++.....+..   +.........+++|+++|+|+|++++||+|+.++++
T Consensus       158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~i  237 (253)
T d1hxha_         158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM  237 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCC
Confidence            99999999999965   499999999999999876554332   222223334567889999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 025273          241 TGETLVVAGGMP  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      |||+|.+|||+.
T Consensus       238 tG~~i~VDGG~~  249 (253)
T d1hxha_         238 SGSELHADNSIL  249 (253)
T ss_dssp             CSCEEEESSSCT
T ss_pred             cCcEEEECccHh
Confidence            999999999985

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=7e-55  Score=355.75  Aligned_cols=245  Identities=31%  Similarity=0.467  Sum_probs=216.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+|+||++|||||++|||++++++|+++|++|++++|+++.++.+.+++... ..+.+++||++++++++++++++.+++
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999999999999988888543 467889999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCC-CCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCC-hhhHhh
Q 025273           88 GKIDVVVSNAAANPSV-DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSM-AMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~-~~y~~s  163 (255)
                      |++|++|||||..... ..+.+.+.++|++++++|+.+++.++|+++|+|+  +.++||++||..+..+.++. ..|+++
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~as  160 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT  160 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchh
Confidence            9999999999986533 3578899999999999999999999999999985  56899999999988876654 589999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChh-HHHH--HHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDG-VRQT--IEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      |+|+++|+|+++.|+.+ |||||+|+||+++|++.......+. ..+.  .....+.+|+++|+|+|+++.||+|+.+++
T Consensus       161 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~  240 (268)
T d2bgka1         161 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKY  240 (268)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCC
Confidence            99999999999999998 9999999999999999876654322 2222  222347789999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      +|||+|.+|||++.
T Consensus       241 itGq~i~VDGG~t~  254 (268)
T d2bgka1         241 VSGLNLVIDGGYTR  254 (268)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCceEEECcCccc
Confidence            99999999999875

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=4.1e-55  Score=355.62  Aligned_cols=246  Identities=28%  Similarity=0.391  Sum_probs=222.5

Q ss_pred             cccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHH
Q 025273            5 KMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         5 ~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      .|.++|+||++|||||++|||+++++.|+++|++|++++|+.+++++..+++.+. +.++.+++||++++++++++++++
T Consensus         2 ~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           2 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence            4666899999999999999999999999999999999999999998888877554 778999999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccC-------C
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQ-------P  153 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~-------~  153 (255)
                      .+++|++|+||||||... ..++.+.+.++|++.+++|+.+++++++.+.|+|.   .++.|++++|.....       +
T Consensus        82 ~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~  160 (260)
T d1h5qa_          82 DADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG  160 (260)
T ss_dssp             HHHSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTE
T ss_pred             HHHhCCCcEecccccccc-cCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccccc
Confidence            999999999999999865 68899999999999999999999999999999983   456788877766543       2


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHh
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  232 (255)
                      .+....|+++|+|+.+|+|+++.|+.+ |||||+|+||+++|++....  .++..+......|++|+++|+|+|+++.||
T Consensus       161 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~g~pedvA~~v~fL  238 (260)
T d1h5qa_         161 SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILL  238 (260)
T ss_dssp             ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHH
T ss_pred             CccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            356789999999999999999999998 99999999999999998755  456667778889999999999999999999


Q ss_pred             cCCCCCCccccEEEeCCCccc
Q 025273          233 ASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|+.++++|||+|.+|||+..
T Consensus       239 ~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         239 LSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             HSGGGTTCCSCEEEECTTGGG
T ss_pred             hcchhCCCcCceEEECCCeec
Confidence            999999999999999999863

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.7e-55  Score=356.04  Aligned_cols=244  Identities=33%  Similarity=0.504  Sum_probs=207.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +|+||++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+   .++.+++||++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999987753   4699999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccC-ccCCCCCChhh
Q 025273           86 KFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIA-GYQPQSSMAMY  160 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~-~~~~~~~~~~y  160 (255)
                      ++|++|+||||||...+   ...+.+.+.++|++++++|+.+++.++++++|+|+ ..+.+|+++|.. +..+.+....|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~Y  161 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYY  161 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchhh
Confidence            99999999999998532   34566778999999999999999999999999997 456777777665 57789999999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC-------hhHHHHHHhhcccCCCCCHHHHHHHHHHh
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN-------DGVRQTIEQNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  232 (255)
                      +++|+|+++|+|+|+.|+.+ |||||+|+||+++|++.......       ...........|++|+++|+|+|+.+.||
T Consensus       162 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL  241 (264)
T d1spxa_         162 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL  241 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999 99999999999999987655322       22334566778999999999999999999


Q ss_pred             cCCC-CCCccccEEEeCCCcc
Q 025273          233 ASDD-ASYITGETLVVAGGMP  252 (255)
Q Consensus       233 ~s~~-~~~~~G~~i~~dgG~~  252 (255)
                      +|++ ++++|||+|.+|||++
T Consensus       242 ~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         242 ADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             HCHHHHTTCCSCEEEESTTGG
T ss_pred             hCCcccCCccCceEEeCCChh
Confidence            9954 7899999999999986

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.9e-55  Score=354.75  Aligned_cols=247  Identities=26%  Similarity=0.314  Sum_probs=216.2

Q ss_pred             ccccCCCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      |..+|+||++|||||+|  |||++++++|+++|++|++++|+++..+.. +++.....+..++++|++++++++++++++
T Consensus         2 ~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEALGGALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             EEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhccCcccccccccCCHHHHHHHHHHH
Confidence            45679999999999987  999999999999999999999997655544 444444557778999999999999999999


Q ss_pred             HHHhCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhh
Q 025273           84 IEKFGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      .+++|++|+||||||....   ..++.+.+.++|++.+++|+.+++.+++.+.|+|+++++||++||..+..+.+....|
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y  160 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVM  160 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHH
T ss_pred             HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHH
Confidence            9999999999999998642   3456788899999999999999999999999999988999999999999999999999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +++|+|+++|+|+++.|+.+ |||||+|+||+++|++.......++..+......|++|+++|+|+|+++.||+|+.+++
T Consensus       161 ~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  240 (256)
T d1ulua_         161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASG  240 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999999999998 99999999999999998877777778888888999999999999999999999999999


Q ss_pred             ccccEEEeCCCccc
Q 025273          240 ITGETLVVAGGMPS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      +|||+|.+|||++.
T Consensus       241 itG~~i~VDGG~~~  254 (256)
T d1ulua_         241 ITGEVVYVDAGYHI  254 (256)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCCeEEECcCEeC
Confidence            99999999999874

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.7e-54  Score=353.13  Aligned_cols=245  Identities=31%  Similarity=0.466  Sum_probs=217.8

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +|+||++|||||++|||+++++.|+++|++|++++|+.+.++.+.+++...+   .++.+++||++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999987763   4789999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHh
Q 025273           86 KFGKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      +||++|++|||||.... .....+.+.++|++.+++|+.+++.++|+++|+|+  ++++|+++||..+..+.+.+..|++
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence            99999999999997542 34556678899999999999999999999999996  5678888888888899999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHH-------HHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVR-------QTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      +|+|+.+|+|++|.|+.+ |||||+|+||+++|++.......+...       .......|++|+++|+|+|+++.||+|
T Consensus       161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S  240 (274)
T d1xhla_         161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD  240 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcC
Confidence            999999999999999999 999999999999999887654332211       222345699999999999999999999


Q ss_pred             C-CCCCccccEEEeCCCccc
Q 025273          235 D-DASYITGETLVVAGGMPS  253 (255)
Q Consensus       235 ~-~~~~~~G~~i~~dgG~~~  253 (255)
                      + .++++|||+|.+|||++.
T Consensus       241 ~d~s~~itG~~i~vDGG~~l  260 (274)
T d1xhla_         241 RNLSSYIIGQSIVADGGSTL  260 (274)
T ss_dssp             HHHHTTCCSCEEEESTTGGG
T ss_pred             CccccCccCcEEEeCcCHHH
Confidence            6 588999999999999864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.6e-54  Score=354.18  Aligned_cols=245  Identities=31%  Similarity=0.467  Sum_probs=214.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +|+||++|||||++|||+++++.|+++|++|++++|+.+.++.+.+++.+.+   .++.+++||++++++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999987653   4799999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCC---CCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcc-cCccCCCCCChhh
Q 025273           86 KFGKIDVVVSNAAANPSV---DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISS-IAGYQPQSSMAMY  160 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss-~~~~~~~~~~~~y  160 (255)
                      ++|++|+||||||.....   ....+.+.++|++++++|+.+++.++++++|+|+ +.+.+|+++| .++..+.+....|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y  161 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY  161 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence            999999999999987532   2234567788999999999999999999999996 3455665555 5678899999999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHH-------HHHHhhcccCCCCCHHHHHHHHHHh
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVR-------QTIEQNTLLNRLGTTRDMAAAAAFL  232 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~a~~~~~l  232 (255)
                      +++|+|+.+|+|+++.|+.+ |||||+|+||+++|+|.......+...       .......|++|+++|+|+|+++.||
T Consensus       162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL  241 (272)
T d1xkqa_         162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL  241 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999988 999999999999999987665443322       2334557899999999999999999


Q ss_pred             cCCC-CCCccccEEEeCCCccc
Q 025273          233 ASDD-ASYITGETLVVAGGMPS  253 (255)
Q Consensus       233 ~s~~-~~~~~G~~i~~dgG~~~  253 (255)
                      +|++ +.++|||+|.+|||++.
T Consensus       242 ~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         242 ADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             HCHHHHTTCCSCEEEESTTGGG
T ss_pred             hCcchhCCccCeEEEeCcCHHH
Confidence            9976 56899999999999875

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=2.5e-54  Score=353.66  Aligned_cols=243  Identities=27%  Similarity=0.439  Sum_probs=214.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +|+||++|||||++|||++++++|+++|++|++++|+.++++.+.+++   +.++.++++|++++++++++++++.+++|
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999999998877766654   46899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCC----ccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           89 KIDVVVSNAAANPSVDS----ILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      ++|++|||||+......    ..+.+.++|++++++|+.+++.++++++|+|+ ++++||+++|..+..+.+....|+++
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~Y~as  158 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAA  158 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHHHHHH
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCchHHHH
Confidence            99999999998653333    23445567999999999999999999999995 56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc--------CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT--------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      |+|+.+|+|++|.|+.++||||+|+||+++|++.....        ...+.........|++|+++|+|+++.++||+|+
T Consensus       159 Kaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~  238 (276)
T d1bdba_         159 KHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATR  238 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCH
T ss_pred             HHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCC
Confidence            99999999999999988999999999999999865432        2234556677778999999999999999999985


Q ss_pred             -CCCCccccEEEeCCCcccC
Q 025273          236 -DASYITGETLVVAGGMPSR  254 (255)
Q Consensus       236 -~~~~~~G~~i~~dgG~~~~  254 (255)
                       .++++|||+|.+|||++.|
T Consensus       239 ~~a~~itG~~i~VDGG~~~~  258 (276)
T d1bdba_         239 GDAAPATGALLNYDGGLGVR  258 (276)
T ss_dssp             HHHTTCSSCEEEESSSGGGC
T ss_pred             cccCCeeCcEEEECcChhhc
Confidence             5889999999999998764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-54  Score=353.30  Aligned_cols=244  Identities=28%  Similarity=0.412  Sum_probs=220.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-----CCeEEEEEecCCCHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-----GIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      ..|+||++|||||++|||+++++.|+++|++|++++|+.+.++...+++...     +.++.+++||+++++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            3489999999999999999999999999999999999999999998888653     56899999999999999999999


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhh
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      +.+.+|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|+  +.++||++|+ .+..+.+....|
T Consensus        88 ~~~~~G~iDiLVnnAg~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y  165 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHS  165 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHH
T ss_pred             HHHHhCCeEEEEeeccccc-cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccc
Confidence            9999999999999999866 67899999999999999999999999999999986  5678888865 455678889999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC--ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS--NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +++|+|+++|+|++|.|+.+ |||||+|+||+++|++......  .++..+......|++|+++|+|+|+++.||+|+.+
T Consensus       166 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s  245 (297)
T d1yxma1         166 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAA  245 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999998 9999999999999998754432  23444556677899999999999999999999999


Q ss_pred             CCccccEEEeCCCccc
Q 025273          238 SYITGETLVVAGGMPS  253 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~  253 (255)
                      +++|||+|.+|||++.
T Consensus       246 ~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         246 SFITGQSVDVDGGRSL  261 (297)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCcCCcEEEeCcChhh
Confidence            9999999999999864

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=7.2e-54  Score=344.13  Aligned_cols=238  Identities=31%  Similarity=0.463  Sum_probs=211.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.++...+   +.+.++.+++||++++++++++++++.+++|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA---ALEAEAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TCCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999999999999999877655444   4467899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.|+|++.+.++++||.+. .+.+.+..|+++|+|++
T Consensus        79 ~iDiLinnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~-~~~~~~~~Y~~sK~al~  156 (241)
T d2a4ka1          79 RLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG-LGAFGLAHYAAGKLGVV  156 (241)
T ss_dssp             CCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT-CCHHHHHHHHHCSSHHH
T ss_pred             CccEecccccccc-ccchhhhhccccccccccccccccccccccccccccccceeecccccc-ccccCccccchhhHHHH
Confidence            9999999999865 688999999999999999999999999999999988777777666554 45577889999999999


Q ss_pred             HHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       169 ~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +|+|+|++|+.+ |||||+|+||+++|++....  .++..+......|.+|+++|+|+++++.||+|+..+++||++|.+
T Consensus       157 ~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~v  234 (241)
T d2a4ka1         157 GLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYV  234 (241)
T ss_dssp             HHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh--hHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEe
Confidence            999999999999 99999999999999987644  345566677788999999999999999999999999999999999


Q ss_pred             CCCccc
Q 025273          248 AGGMPS  253 (255)
Q Consensus       248 dgG~~~  253 (255)
                      |||++.
T Consensus       235 DGG~s~  240 (241)
T d2a4ka1         235 DGGRSI  240 (241)
T ss_dssp             STTTTT
T ss_pred             CCCccc
Confidence            999863

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=8.7e-54  Score=346.12  Aligned_cols=234  Identities=25%  Similarity=0.366  Sum_probs=213.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      |+|||||++|||+++|+.|+++|++|++++|+.+.++.+.+....      +.++|++++++++++++++.++||++|+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iDiL   75 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVDVL   75 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence            799999999999999999999999999999998888776554332      24689999999999999999999999999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHHHHHH
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLT  171 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~  171 (255)
                      |||||+.....++.+.+.++|++.+++|+.++++++++++|+|+  +.|+||++||..+..+.+....|+++|+|+.+|+
T Consensus        76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt  155 (252)
T d1zmta1          76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLA  155 (252)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHH
Confidence            99999876568899999999999999999999999999999996  5789999999999999999999999999999999


Q ss_pred             HHHHHHhCC-CeeEEEEeCCcccCCcccccc------CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccE
Q 025273          172 KALAAEMAP-DTRVNCVAPGFVPTHFAEYIT------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGET  244 (255)
Q Consensus       172 ~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~  244 (255)
                      |+++.|+.+ |||||+|+||+++|++.....      ..++..+......|++|+++|+|+|++++||+|+.++++|||+
T Consensus       156 ~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~~  235 (252)
T d1zmta1         156 NALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQV  235 (252)
T ss_dssp             HHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCE
T ss_pred             HHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCe
Confidence            999999998 999999999999999876553      2445666778889999999999999999999999999999999


Q ss_pred             EEeCCCccc
Q 025273          245 LVVAGGMPS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      |.+|||++.
T Consensus       236 i~vdGG~~~  244 (252)
T d1zmta1         236 FWLAGGFPM  244 (252)
T ss_dssp             EEESTTCCC
T ss_pred             EEECCCcee
Confidence            999999875

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2e-53  Score=345.60  Aligned_cols=243  Identities=29%  Similarity=0.509  Sum_probs=220.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-CCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS-RKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ..|+||+||||||++|||++++++|+++|++|++++ |+.+.++.+.+++...+.++.+++||++++++++++++++.++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            358999999999999999999999999999999875 5556678888899888899999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc-cCCCCCChhhHhhHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG-YQPQSSMAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~-~~~~~~~~~y~~sK~  165 (255)
                      +|++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++.+++++++|..+ ..+.+.+..|+++|+
T Consensus        82 ~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~  160 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKA  160 (259)
T ss_dssp             HSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred             cCCCcEEEecccccc-ccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHH
Confidence            999999999999865 678899999999999999999999999999999998888888887665 447889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc-----------CChhHHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT-----------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      |+++|+|+|++|+.+ |||||+|+||+++|++.+...           ..+...+......|++|+++|+|++++++||+
T Consensus       161 al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~  240 (259)
T d1ja9a_         161 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC  240 (259)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999 999999999999999764432           12345566778889999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCc
Q 025273          234 SDDASYITGETLVVAGGM  251 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~  251 (255)
                      |+.++++||++|.+|||.
T Consensus       241 S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         241 QEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             CchhcCCcCceEEeCCCC
Confidence            999999999999999995

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.1e-52  Score=340.88  Aligned_cols=245  Identities=28%  Similarity=0.466  Sum_probs=219.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+|+||++|||||++|||++++++|+++|++|++++|+ .+.++.+.+++...+.++.+++||++++++++++++++.+.
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            45999999999999999999999999999999999887 45677788888888889999999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-CCCCCChhhHhhHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-QPQSSMAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK~  165 (255)
                      +|++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.++|+|++.+++++++|..+. .+.+....|+++|+
T Consensus        94 ~g~idilV~nag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asKa  172 (272)
T d1g0oa_          94 FGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKG  172 (272)
T ss_dssp             HSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHH
T ss_pred             hCCCCccccccccch-hhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHHH
Confidence            999999999999876 6789999999999999999999999999999999988999999888654 46777888999999


Q ss_pred             HHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC----------hh-HHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----------DG-VRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      |+++|+|++++|+.+ |||||+|+||+++|++.......          +. .........|++|+++|+|+|+.+.||+
T Consensus       173 al~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~  252 (272)
T d1g0oa_         173 AIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA  252 (272)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999998 99999999999999987554321          11 1123456678999999999999999999


Q ss_pred             CCCCCCccccEEEeCCCccc
Q 025273          234 SDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+.++++||++|.+|||.++
T Consensus       253 s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         253 SNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             SGGGTTCCSCEEEESTTCCC
T ss_pred             CchhcCccCceEeECCCCCC
Confidence            99999999999999999853

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.1e-52  Score=332.17  Aligned_cols=227  Identities=28%  Similarity=0.468  Sum_probs=202.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      |+||++|||||++|||+++++.|+++|++|++++|+++.++.       .+  ..+++||+++.      ++.+.+++|+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~~--~~~~~~Dv~~~------~~~~~~~~g~   66 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------SG--HRYVVCDLRKD------LDLLFEKVKE   66 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------TC--SEEEECCTTTC------HHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------cC--CcEEEcchHHH------HHHHHHHhCC
Confidence            789999999999999999999999999999999999765443       22  24578999864      3455677899


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|+  +.++||+++|..+..+.+....|+++|+|+
T Consensus        67 iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal  145 (234)
T d1o5ia_          67 VDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL  145 (234)
T ss_dssp             CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CcEEEecccccC-CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHH
Confidence            999999999765 67889999999999999999999999999999996  568999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEE
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~  246 (255)
                      .+|+|++++|+.+ |||||+|+||+++|++...... +...+......|++|+++|+|+++++.||+|+.++++|||+|.
T Consensus       146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~  224 (234)
T d1o5ia_         146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS-EEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIV  224 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC-HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEE
Confidence            9999999999998 9999999999999998876554 3445667778899999999999999999999999999999999


Q ss_pred             eCCCccc
Q 025273          247 VAGGMPS  253 (255)
Q Consensus       247 ~dgG~~~  253 (255)
                      +|||++.
T Consensus       225 vDGG~s~  231 (234)
T d1o5ia_         225 VDGGLSK  231 (234)
T ss_dssp             ESTTCCC
T ss_pred             ECccccc
Confidence            9999875

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-51  Score=333.57  Aligned_cols=240  Identities=24%  Similarity=0.378  Sum_probs=212.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|++++++.+++++...+  .++.+++||++++++++++++++.+
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            55999999999999999999999999999999999999999999999998763  6899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc----CCCeEEEEcccCccCC--CCCChh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ----KGSSVVLISSIAGYQP--QSSMAM  159 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~----~~~~iv~iss~~~~~~--~~~~~~  159 (255)
                      ++|++|+||||||... ..++.+.+.++|++.+++|+.+++++.+.++|.|+    ++++||++||.++...  .+....
T Consensus        86 ~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~  164 (257)
T d1xg5a_          86 QHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF  164 (257)
T ss_dssp             HHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred             hcCCCCEEEecccccC-CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHH
Confidence            9999999999999876 67899999999999999999999999999999874    3689999999998754  556678


Q ss_pred             hHhhHHHHHHHHHHHHHHh--CC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          160 YGVTKTALLGLTKALAAEM--AP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~--~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      |+++|+|+.+|+|+|+.|+  .+ +||+|+|+||+++|++.......  ..+......+.+++++|+|+|+++.||+|++
T Consensus       165 Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~--~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~  242 (257)
T d1xg5a_         165 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK--DPEKAAATYEQMKCLKPEDVAEAVIYVLSTP  242 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT--CHHHHHHHHC---CBCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh--hHHHHHhcCCCCCCcCHHHHHHHHHHHhCCh
Confidence            9999999999999999997  55 99999999999999988765432  2345566678899999999999999999999


Q ss_pred             CCCccccEEEeCCC
Q 025273          237 ASYITGETLVVAGG  250 (255)
Q Consensus       237 ~~~~~G~~i~~dgG  250 (255)
                      +++++||++..++|
T Consensus       243 a~~itG~i~i~~~g  256 (257)
T d1xg5a_         243 AHIQIGDIQMRPTG  256 (257)
T ss_dssp             TTEEEEEEEEEETT
T ss_pred             hcCeECCEEEEeCC
Confidence            99999998666555

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-52  Score=337.28  Aligned_cols=233  Identities=27%  Similarity=0.399  Sum_probs=208.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .||++|||||++|||++++++|+++|++|++++|+.++++...+++.+.  +.++.+++||++++++++++++++.+++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5999999999999999999999999999999999999999998888665  46899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-----CCeEEEEcccCccCCCCCChhhHhh
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-----GSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      ++|+||||||....         ++|++++++|+.+++.+++.++|+|++     +++||++||..+..+.+...+|++|
T Consensus        82 ~iDilVnnAg~~~~---------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  152 (254)
T d2gdza1          82 RLDILVNNAGVNNE---------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCAS  152 (254)
T ss_dssp             CCCEEEECCCCCCS---------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CcCeeccccccccc---------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHH
Confidence            99999999998642         248999999999999999999999852     4789999999999999999999999


Q ss_pred             HHHHHHHHHH--HHHHhCC-CeeEEEEeCCcccCCccccccCC------hhHHHHHHhhcccCCCCCHHHHHHHHHHhcC
Q 025273          164 KTALLGLTKA--LAAEMAP-DTRVNCVAPGFVPTHFAEYITSN------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       164 K~a~~~l~~~--la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s  234 (255)
                      |+|+.+|+|+  |+.|+.+ |||||+|+||+++|+|.......      .+..+......|++|+++|+|+|+.++||+|
T Consensus       153 Kaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  232 (254)
T d2gdza1         153 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE  232 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHc
Confidence            9999999997  6889988 99999999999999998766432      2334556667788999999999999999998


Q ss_pred             CCCCCccccEEEeCCCcccC
Q 025273          235 DDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ++  ++||++|.||||...+
T Consensus       233 ~~--~itG~~i~VdGG~~~~  250 (254)
T d2gdza1         233 DD--ALNGAIMKITTSKGIH  250 (254)
T ss_dssp             CT--TCSSCEEEEETTTEEE
T ss_pred             CC--CCCCCEEEECCCCeee
Confidence            64  4999999999998754

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=3.2e-51  Score=328.35  Aligned_cols=226  Identities=20%  Similarity=0.307  Sum_probs=208.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCe-------EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGAS-------VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ++||||||++|||++++++|+++|++       |++++|+.+.++.+.+++...+.++.+++||++++++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999997       99999999999999999988889999999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      ++|++|+||||||... ..++.+.+.++|++++++|+.|++.++|+++|+|+  +.|+||++||.++..+.+.+..|+++
T Consensus        82 ~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  160 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  160 (240)
T ss_dssp             HTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HcCCcceeeccccccc-CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHH
Confidence            9999999999999876 68899999999999999999999999999999996  57899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|+.+|+|+|+.|+.+ |||||+|+||+++|+|........           ..++.+|+|+|+.++|++++++++++|
T Consensus       161 K~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~-----------~~~~~~PedvA~~v~~l~s~~~~~~~~  229 (240)
T d2bd0a1         161 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----------QALMMMPEDIAAPVVQAYLQPSRTVVE  229 (240)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----------GGGSBCHHHHHHHHHHHHTSCTTEEEE
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhh-----------HhcCCCHHHHHHHHHHHHcCCccCccC
Confidence            99999999999999998 999999999999999987654322           134679999999999999998888887


Q ss_pred             cE-EEeCCC
Q 025273          243 ET-LVVAGG  250 (255)
Q Consensus       243 ~~-i~~dgG  250 (255)
                      +. +..+||
T Consensus       230 ~~~i~p~~G  238 (240)
T d2bd0a1         230 EIILRPTSG  238 (240)
T ss_dssp             EEEEEETTC
T ss_pred             CEEEEecCC
Confidence            74 557776

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.4e-50  Score=334.78  Aligned_cols=245  Identities=27%  Similarity=0.386  Sum_probs=218.7

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+.++++...+++... +.++.+++||+++.++++++++.+.+
T Consensus        20 ~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            35799999999999999999999999999999999999999999888877654 77899999999999999999999999


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCccCCCCCChhhHh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      .++++|++|||||... ..++.+.+.++|++.+.+|+.+.+.+.+...+.+.   .++.+++++|..+..+.+...+|++
T Consensus       100 ~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysa  178 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  178 (294)
T ss_dssp             HTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             hccccchhhhhhhhcc-ccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHH
Confidence            9999999999999866 67888999999999999999999999888776653   5667888999888889999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccC-ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITS-NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +|+|+++|+|++|+|+.+ |||||+|+||+++|++...... .+...+......|++|+++|+|+++++.||+++.++++
T Consensus       179 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~i  258 (294)
T d1w6ua_         179 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWI  258 (294)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcCC
Confidence            999999999999999998 9999999999999998766543 44566777888899999999999999999999999999


Q ss_pred             cccEEEeCCCcc
Q 025273          241 TGETLVVAGGMP  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      ||++|.+|||.+
T Consensus       259 tG~~i~vDGG~~  270 (294)
T d1w6ua_         259 NGAVIKFDGGEE  270 (294)
T ss_dssp             CSCEEEESTTHH
T ss_pred             CCcEEEECCChh
Confidence            999999999965

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-51  Score=327.22  Aligned_cols=235  Identities=28%  Similarity=0.439  Sum_probs=205.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+|+||++|||||++|||+++++.|+++|++|++++|++++++.+.+     ...+....+|+.+.+.++..    .+.+
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~----~~~~   72 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQF----ANEV   72 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHH----HHHC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeecccccccccc----cccc
Confidence            45899999999999999999999999999999999999876654432     23577788999887765554    4556


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCcc-CCCCCChhhHhhH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGY-QPQSSMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~-~~~~~~~~y~~sK  164 (255)
                      +++|+||||+|... ..++.+.+.++|++.+++|+.+++.+++.+.|+|.  +.++||++||..+. .+.+...+|+++|
T Consensus        73 ~~id~lVn~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sK  151 (245)
T d2ag5a1          73 ERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK  151 (245)
T ss_dssp             SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred             ccceeEEecccccC-CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHH
Confidence            89999999999876 57889999999999999999999999999999885  67899999998775 5788899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCcccccc----CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCC
Q 025273          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYIT----SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASY  239 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~  239 (255)
                      +|+++|+|++|.|+++ |||||+|+||+++|++.....    .............|++|+++|+|+++.+.||+++++++
T Consensus       152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~  231 (245)
T d2ag5a1         152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAY  231 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCC
Confidence            9999999999999999 999999999999999876542    22344556677889999999999999999999999999


Q ss_pred             ccccEEEeCCCcc
Q 025273          240 ITGETLVVAGGMP  252 (255)
Q Consensus       240 ~~G~~i~~dgG~~  252 (255)
                      +||++|.+|||++
T Consensus       232 iTG~~i~VDGG~s  244 (245)
T d2ag5a1         232 VTGNPVIIDGGWS  244 (245)
T ss_dssp             CCSCEEEECTTGG
T ss_pred             CcCceEEeCCCcC
Confidence            9999999999986

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.7e-50  Score=331.41  Aligned_cols=230  Identities=23%  Similarity=0.331  Sum_probs=201.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc---------hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ---------KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKN   78 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   78 (255)
                      ++|+||++|||||++|||++++++|+++|++|++++|+.         +.++.+.+++....   ....+|+++.+++++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~   79 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG---GKAVANYDSVEAGEK   79 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT---CEEEEECCCGGGHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc---cccccccchHHHHHH
Confidence            468899999999999999999999999999999997653         44556666665443   345689999999999


Q ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCC
Q 025273           79 LINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSS  156 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~  156 (255)
                      +++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+  +.|+||++||..+..+.+.
T Consensus        80 ~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~  158 (302)
T d1gz6a_          80 LVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  158 (302)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCccCC-CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC
Confidence            99999999999999999999876 68899999999999999999999999999999996  5689999999999999999


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCC
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASD  235 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~  235 (255)
                      ...|++||+|+.+|+++|+.|+.+ |||||+|+||++.|++....  .++.          .+..+|+|+|+.++||+|+
T Consensus       159 ~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~--~~~~----------~~~~~PedvA~~v~fL~S~  226 (302)
T d1gz6a_         159 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM--PEDL----------VEALKPEYVAPLVLWLCHE  226 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS--CHHH----------HHHSCGGGTHHHHHHHTST
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC--cHhh----------HhcCCHHHHHHHHHHHcCC
Confidence            999999999999999999999988 99999999999988765433  1221          2245899999999999987


Q ss_pred             CCCCccccEEEeCCCcccC
Q 025273          236 DASYITGETLVVAGGMPSR  254 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~~  254 (255)
                      .+ ++||++|.+|||+..+
T Consensus       227 ~a-~itG~~i~vdGG~~~~  244 (302)
T d1gz6a_         227 SC-EENGGLFEVGAGWIGK  244 (302)
T ss_dssp             TC-CCCSCEEEEETTEEEE
T ss_pred             Cc-CCCCcEEEeCCCceeE
Confidence            65 6899999999998653

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.6e-48  Score=313.96  Aligned_cols=239  Identities=21%  Similarity=0.262  Sum_probs=211.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHH---cCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGL---EGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      ..|+||++|||||++|||++++++|++   +|++|++++|+.+.++.+.+++...  +.++.+++||++++++++++++.
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            358899999999999999999999996   7999999999999999999998764  56899999999999999999999


Q ss_pred             HHHH----hCCCCEEEEcCCCCC--CCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC----CCeEEEEcccCccC
Q 025273           83 TIEK----FGKIDVVVSNAAANP--SVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK----GSSVVLISSIAGYQ  152 (255)
Q Consensus        83 ~~~~----~g~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----~~~iv~iss~~~~~  152 (255)
                      +.+.    ++.+|++|||||...  ...++.+.+.++|++++++|+.+++++++.++|+|++    .++||++||..+..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            8763    357899999999764  2466889999999999999999999999999999974    36999999999999


Q ss_pred             CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc---CChhHHHHHHhhcccCCCCCHHHHHHHH
Q 025273          153 PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT---SNDGVRQTIEQNTLLNRLGTTRDMAAAA  229 (255)
Q Consensus       153 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~a~~~  229 (255)
                      +.+.+..|++||+|+++|+|+|+.| .++||||+|+||+++|+|.....   ..++....+....+.+++++|+|+|+.+
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e-~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i  240 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE-EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL  240 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH-CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC-CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999 45999999999999999876543   3455556666677889999999999999


Q ss_pred             HHhcCCCCCCccccEEEeC
Q 025273          230 AFLASDDASYITGETLVVA  248 (255)
Q Consensus       230 ~~l~s~~~~~~~G~~i~~d  248 (255)
                      ++++++ .+++||+.|++-
T Consensus       241 ~~ll~~-~s~~TG~~idv~  258 (259)
T d1oaaa_         241 LGLLQK-DTFQSGAHVDFY  258 (259)
T ss_dssp             HHHHHH-CCSCTTEEEETT
T ss_pred             HHHhhh-ccCCCCCeEEec
Confidence            999976 569999999863

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2.4e-48  Score=314.09  Aligned_cols=234  Identities=15%  Similarity=0.198  Sum_probs=199.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCC-CHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVS-NGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~-~~~~v~~~~~~~~~~   86 (255)
                      +|+||+||||||++|||+++|++|+++|++|++++|+.+..+.+.+..... +.++.++.+|++ +.++++++++++.++
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999998887766665444444 568999999998 677899999999999


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-----CCCeEEEEcccCccCCCCCChhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-----KGSSVVLISSIAGYQPQSSMAMYG  161 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-----~~~~iv~iss~~~~~~~~~~~~y~  161 (255)
                      +|++|+||||||..         +.+.|++++++|++|+++++++++|+|.     ++++||++||..+..+.+.+..|+
T Consensus        82 ~g~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~  152 (254)
T d1sbya1          82 LKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS  152 (254)
T ss_dssp             HSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHH
T ss_pred             cCCCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHH
Confidence            99999999999964         3456999999999999999999999985     257899999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCc
Q 025273          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYI  240 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~  240 (255)
                      +||+|+.+|+++|+.|+.+ |||||+|+||+++|++.+......+............+..+|+++++.++++++..   .
T Consensus       153 asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~---~  229 (254)
T d1sbya1         153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEAN---K  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHC---C
T ss_pred             HHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhCC---C
Confidence            9999999999999999988 99999999999999988766544433333334334445668999999888877543   5


Q ss_pred             cccEEEeCCCcccC
Q 025273          241 TGETLVVAGGMPSR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      ||+++.+|||...+
T Consensus       230 tG~vi~vdgG~l~~  243 (254)
T d1sbya1         230 NGAIWKLDLGTLEA  243 (254)
T ss_dssp             TTCEEEEETTEEEE
T ss_pred             CCCEEEECCCEeCc
Confidence            99999999997543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-47  Score=311.04  Aligned_cols=244  Identities=24%  Similarity=0.302  Sum_probs=218.4

Q ss_pred             cCCCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .|+||++|||||+|  |||+++|+.|+++|++|++++|+++..+.. +++.........+++|+++..++.+.++++.+.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            37899999999998  899999999999999999999997655554 444455567778899999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCCC----CCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHh
Q 025273           87 FGKIDVVVSNAAANPSV----DSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      ++++|++|||++.....    ........+.|...+++|+.+.+.+.+.+.+.+++++.|+++||..+..+.+.+..|++
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~  160 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGL  160 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHH
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHH
Confidence            99999999999886421    22344566789999999999999999999999998889999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      +|+|+++|+|++++|+.+ |||||+|+||+++|++...........+......|++|+++|+|+++.+.||+|+..+++|
T Consensus       161 sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~it  240 (258)
T d1qsga_         161 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGIS  240 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCcc
Confidence            999999999999999999 9999999999999999887766677777788889999999999999999999999999999


Q ss_pred             ccEEEeCCCccc
Q 025273          242 GETLVVAGGMPS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |++|.+|||++.
T Consensus       241 G~~i~vDGG~~i  252 (258)
T d1qsga_         241 GEVVHVDGGFSI  252 (258)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CceEEECcCHHH
Confidence            999999999864

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-47  Score=303.85  Aligned_cols=216  Identities=21%  Similarity=0.321  Sum_probs=195.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++||++|||||++|||++++++|+++|++|++++|+.++++.+.+++...+.++.++.||+++.++++.+++++.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhhHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~sK~  165 (255)
                      |++|++|||||... ..++.+.+.++|++++++|+.|+++++++++|.|+  +.|+||++||..+..+.+.+..|++||+
T Consensus        83 g~idilinnag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  161 (244)
T d1yb1a_          83 GDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKF  161 (244)
T ss_dssp             CCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHH
T ss_pred             CCCceeEeeccccc-cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHH
Confidence            99999999999876 57778899999999999999999999999999996  4679999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhC----CCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCC
Q 025273          166 ALLGLTKALAAEMA----PDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~----~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~  236 (255)
                      |+.+|+++|+.|+.    +||+||+|+||+++|++....    .        .+..+..+|+++++.+...+..+
T Consensus       162 al~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~----~--------~~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         162 AAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP----S--------TSLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT----H--------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc----C--------ccccCCCCHHHHHHHHHHHHhcC
Confidence            99999999999973    279999999999999987532    1        12345679999999888766444

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-46  Score=299.88  Aligned_cols=232  Identities=22%  Similarity=0.374  Sum_probs=200.0

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +|+||++|||||++|||++++++|+++|++|++++|+.+.++...+++   +.......+|+.+.+.++..++.+...++
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFG   78 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCcccccccccccccccccccccccccc
Confidence            589999999999999999999999999999999999999988877766   45788899999999999999999999999


Q ss_pred             CCCEEEEcCCCCCC-----CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--------CCCeEEEEcccCccCCCC
Q 025273           89 KIDVVVSNAAANPS-----VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--------KGSSVVLISSIAGYQPQS  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--------~~~~iv~iss~~~~~~~~  155 (255)
                      .+|.++++++....     ..+..+.+.++|++++++|+.+++++++++.|+|.        ++|+||++||..+..+.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~  158 (248)
T d2o23a1          79 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV  158 (248)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             cccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCC
Confidence            99999999876542     24556778899999999999999999999999864        357999999999999999


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhccc-CCCCCHHHHHHHHHHhc
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL-NRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~  233 (255)
                      ++..|+++|+|+++|+|+|++|+.+ |||||+|+||+++|++......  +.........|+ +|+++|+|+|+++.||+
T Consensus       159 ~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~--~~~~~~~~~~pl~~R~g~peevA~~v~fL~  236 (248)
T d2o23a1         159 GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE--KVCNFLASQVPFPSRLGDPAEYAHLVQAII  236 (248)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCH--HHHHHHHhcCCCCCCCcCHHHHHHHHHHHH
Confidence            9999999999999999999999999 9999999999999998876532  233344455565 89999999999999999


Q ss_pred             CCCCCCccccEEEe
Q 025273          234 SDDASYITGETLVV  247 (255)
Q Consensus       234 s~~~~~~~G~~i~~  247 (255)
                      +  ++++|||+|+|
T Consensus       237 s--~~~itGq~I~v  248 (248)
T d2o23a1         237 E--NPFLNGEVIRL  248 (248)
T ss_dssp             H--CTTCCSCEEEE
T ss_pred             h--CCCCCceEeEC
Confidence            6  47999999976

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=1.9e-45  Score=300.94  Aligned_cols=244  Identities=23%  Similarity=0.294  Sum_probs=212.9

Q ss_pred             cCCCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++. +...+++...+....+.++|++++++++++++++.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~-~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            37899999999865  99999999999999999999999654 4445556566677788999999999999999999999


Q ss_pred             hCCCCEEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhh
Q 025273           87 FGKIDVVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|++|||+|....   .........+.+...+.++..+.+.+.+.+.+.++.+..|+++|+.+...+.+....|+++
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~as  160 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLA  160 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHH
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHH
Confidence            9999999999998754   2334445566777777788888888888888777777778888888888888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      |+|+++|+|+++.|+.+ |||||+|+||+++|++.......+..........+.+|+++|+|+++++.||+|+..+++||
T Consensus       161 K~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~itG  240 (274)
T d2pd4a1         161 KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSG  240 (274)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCCCcC
Confidence            99999999999999998 99999999999999999887776777777888889999999999999999999999999999


Q ss_pred             cEEEeCCCccc
Q 025273          243 ETLVVAGGMPS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      |+|.+|||++.
T Consensus       241 ~~i~vDGG~~~  251 (274)
T d2pd4a1         241 EVHFVDAGYHV  251 (274)
T ss_dssp             CEEEESTTGGG
T ss_pred             ceEEECCChhh
Confidence            99999999864

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3e-46  Score=312.98  Aligned_cols=242  Identities=19%  Similarity=0.194  Sum_probs=203.7

Q ss_pred             CCEEEEEc--CCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc------------CCeEEEEEe---------
Q 025273           12 GKVAIVTA--STQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR------------GIEVIGVVC---------   68 (255)
Q Consensus        12 ~k~vlItG--a~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~---------   68 (255)
                      +|++||||  +++|||+++++.|+++|++|++++++............+.            ........+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            79999999  5589999999999999999999999876554443332211            112233333         


Q ss_pred             -----------cCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCCC-CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcc
Q 025273           69 -----------HVSNGQQRKNLINQTIEKFGKIDVVVSNAAANPS-VDSILQTKESVLDKLWDINVKSSILLLQDAAPHL  136 (255)
Q Consensus        69 -----------Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  136 (255)
                                 |+++.++++.+++.+.+.||++|++|||+|.... .+++.+.+.++|++++++|+++.+.++|+++|+|
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                       6668888999999999999999999999997643 3578899999999999999999999999999999


Q ss_pred             cCCCeEEEEcccCccCCCCC-ChhhHhhHHHHHHHHHHHHHHhCC--CeeEEEEeCCcccCCcccccc------------
Q 025273          137 QKGSSVVLISSIAGYQPQSS-MAMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAEYIT------------  201 (255)
Q Consensus       137 ~~~~~iv~iss~~~~~~~~~-~~~y~~sK~a~~~l~~~la~e~~~--~v~v~~v~pg~v~t~~~~~~~------------  201 (255)
                      +++++||++||..+..+.+. ...|+++|+|+++|+|+|+.|+++  |||||+|+||+++|+..+.+.            
T Consensus       162 ~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~~  241 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQ  241 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC------------
T ss_pred             ccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhhh
Confidence            99999999999999888776 567999999999999999999974  899999999999995433211            


Q ss_pred             -------------------------------CChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 025273          202 -------------------------------SNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       202 -------------------------------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                                                     ..+...+......|++|+++|+|++.+++||+|+..+++|||+|.+|||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~VDGG  321 (329)
T d1uh5a_         242 NKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNG  321 (329)
T ss_dssp             ------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECCC
Confidence                                           1234456677778999999999999999999999999999999999999


Q ss_pred             ccc
Q 025273          251 MPS  253 (255)
Q Consensus       251 ~~~  253 (255)
                      ++.
T Consensus       322 ~~~  324 (329)
T d1uh5a_         322 LNI  324 (329)
T ss_dssp             GGG
T ss_pred             ccc
Confidence            875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1e-45  Score=305.92  Aligned_cols=248  Identities=23%  Similarity=0.234  Sum_probs=206.8

Q ss_pred             ccccCCCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc------------CCeEEEEEec--
Q 025273            6 MAKRFQGKVAIVTASTQ--GIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR------------GIEVIGVVCH--   69 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~D--   69 (255)
                      |..+|+||++|||||+|  |||+++++.|+++|++|++++|+..............            ...-....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            55679999999999876  9999999999999999999999865433322221111            0111233333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCCccCCCHHHHHHHHHHHhHHHHHHHH
Q 025273           70 ------------------VSNGQQRKNLINQTIEKFGKIDVVVSNAAANP-SVDSILQTKESVLDKLWDINVKSSILLLQ  130 (255)
Q Consensus        70 ------------------v~~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  130 (255)
                                        .++...++++++++.++||++|+||||||... ...++.+.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              24455678899999999999999999999753 24678899999999999999999999999


Q ss_pred             HHhhcccCCCeEEEEcccCccC-CCCCChhhHhhHHHHHHHHHHHHHHhC-C-CeeEEEEeCCcccCCccccccCChhHH
Q 025273          131 DAAPHLQKGSSVVLISSIAGYQ-PQSSMAMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAEYITSNDGVR  207 (255)
Q Consensus       131 ~~~~~~~~~~~iv~iss~~~~~-~~~~~~~y~~sK~a~~~l~~~la~e~~-~-~v~v~~v~pg~v~t~~~~~~~~~~~~~  207 (255)
                      ++++.+++++.++++++..... ..+....|+++|+++..+++.++.|+. + |||||+|+||+++|++.......++..
T Consensus       162 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~  241 (297)
T d1d7oa_         162 HFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMI  241 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHH
T ss_pred             HHHHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHH
Confidence            9999998877887777766553 456777899999999999999999996 4 999999999999999988766667777


Q ss_pred             HHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          208 QTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       208 ~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +......|++|+++|+|+++++.||+|+..+++|||+|.+|||++.
T Consensus       242 ~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~  287 (297)
T d1d7oa_         242 EYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             HHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhh
Confidence            7888889999999999999999999999999999999999999864

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=6.4e-45  Score=299.26  Aligned_cols=235  Identities=28%  Similarity=0.372  Sum_probs=194.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC-chhHHHHHHHHHhc-CCeEEEE-----------------EecCCCHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRK-QKNVDEAVVKLKAR-GIEVIGV-----------------VCHVSNGQ   74 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~-~~~~~~~-----------------~~Dv~~~~   74 (255)
                      ++|||||++|||++++++|+++|++|++++|+ .+.++.+.+++... +.....+                 .+|+++.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            68999999999999999999999999998765 55566777777654 4455544                 45599999


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHH--------------HHHHHHHhHHHHHHHHHHhhcc----
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVL--------------DKLWDINVKSSILLLQDAAPHL----  136 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~--------------~~~~~~n~~~~~~~~~~~~~~~----  136 (255)
                      +++++++++.+++|++|+||||||... ..++.+.+.++|              ...+++|+.+++.+.+.+.+.+    
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCccC-CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            999999999999999999999999876 455555555444              3578999999999999887653    


Q ss_pred             --c--CCCeEEEEcccCccCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHH
Q 025273          137 --Q--KGSSVVLISSIAGYQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIE  211 (255)
Q Consensus       137 --~--~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~  211 (255)
                        +  ..++|++++|.....+.+.+.+|+++|+|+++|+|++++|+.+ |||||+|+||++.+...    ..++..+...
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~----~~~~~~~~~~  238 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD----MPPAVWEGHR  238 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG----SCHHHHHHHH
T ss_pred             HHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc----CCHHHHHHHH
Confidence              2  3468999999999999999999999999999999999999999 99999999998655322    2345555666


Q ss_pred             hhccc-CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          212 QNTLL-NRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       212 ~~~~~-~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ...|+ +|+++|+|+++++.||+|+.++++|||+|.+|||++.
T Consensus       239 ~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl  281 (284)
T d1e7wa_         239 SKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  281 (284)
T ss_dssp             TTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhc
Confidence            66664 8999999999999999999999999999999999974

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-44  Score=292.24  Aligned_cols=218  Identities=23%  Similarity=0.261  Sum_probs=190.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |++|||||++|||+++|++|+++ |++|++++|+.++++.+.+++...+.++.+++||+++.++++++++++.+++|++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            45699999999999999999987 89999999999999999999988888999999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-------------------
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-------------------  152 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-------------------  152 (255)
                      +||||||+.. .....+.+.++|++++++|++|++.+++.++|+|++.++||++||..+..                   
T Consensus        84 iLVnNAGi~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~  162 (275)
T d1wmaa1          84 VLVNNAGIAF-KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT  162 (275)
T ss_dssp             EEEECCCCCC-CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred             EEEEcCCcCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccc
Confidence            9999999876 46667788899999999999999999999999999889999999976532                   


Q ss_pred             ----------------------CCCCChhhHhhHHHHHHHHHHHHHHhC----C-CeeEEEEeCCcccCCccccccCChh
Q 025273          153 ----------------------PQSSMAMYGVTKTALLGLTKALAAEMA----P-DTRVNCVAPGFVPTHFAEYITSNDG  205 (255)
Q Consensus       153 ----------------------~~~~~~~y~~sK~a~~~l~~~la~e~~----~-~v~v~~v~pg~v~t~~~~~~~~~~~  205 (255)
                                            +..+...|++||+++..|++.+++++.    . +|+||+|+||+++|+|....     
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~-----  237 (275)
T d1wmaa1         163 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK-----  237 (275)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT-----
T ss_pred             hhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc-----
Confidence                                  122345799999999999999999873    2 89999999999999986432     


Q ss_pred             HHHHHHhhcccCCCCCHHHHHHHHHHhc--CCCCCCccccEEEeCC
Q 025273          206 VRQTIEQNTLLNRLGTTRDMAAAAAFLA--SDDASYITGETLVVAG  249 (255)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~d~a~~~~~l~--s~~~~~~~G~~i~~dg  249 (255)
                                  ...+|+|.|+.++|++  +++....+|+.+. |.
T Consensus       238 ------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~  270 (275)
T d1wmaa1         238 ------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EK  270 (275)
T ss_dssp             ------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TT
T ss_pred             ------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CC
Confidence                        1237999999999886  4455678898775 44

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-44  Score=295.12  Aligned_cols=230  Identities=20%  Similarity=0.268  Sum_probs=184.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEE---EeCCchhHHHHH---HHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVV---SSRKQKNVDEAV---VKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~---~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .|+||||||++|||+++|++|+++|++|+.   +.|+.+..+.+.   +++...+.++.+++||+++.++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            478999999999999999999999987544   456555444443   34444577999999999999999999988743


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--CCCeEEEEcccCccCCCCCChhhHhh
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--KGSSVVLISSIAGYQPQSSMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~s  163 (255)
                        |.+|++|||+|... ..++++.+.++|++.+++|+.|+++++++++|+|+  +.|+||++||.++..+.+....|++|
T Consensus        82 --g~idilvnnag~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~as  158 (285)
T d1jtva_          82 --GRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCAS  158 (285)
T ss_dssp             --SCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             --cchhhhhhcccccc-cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHH
Confidence              78999999999876 67889999999999999999999999999999996  57899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhH---------HHH------HHhhcccCCCCCHHHHHH
Q 025273          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGV---------RQT------IEQNTLLNRLGTTRDMAA  227 (255)
Q Consensus       164 K~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~---------~~~------~~~~~~~~~~~~~~d~a~  227 (255)
                      |+|+++|+++|+.|+.+ |||||+|+||+++|++.......++.         ...      .....+.++.++|+|+|+
T Consensus       159 Kaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~  238 (285)
T d1jtva_         159 KFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE  238 (285)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHH
Confidence            99999999999999998 99999999999999998766433211         111      111223456789999999


Q ss_pred             HHHHhcCCCC---CCccccE
Q 025273          228 AAAFLASDDA---SYITGET  244 (255)
Q Consensus       228 ~~~~l~s~~~---~~~~G~~  244 (255)
                      .++++++.+.   ++++|+.
T Consensus       239 ~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         239 VFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             HHHHHHHCSSCCSEEESCST
T ss_pred             HHHHHHhCCCCCeEEecHHH
Confidence            9999986543   4566653

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=4.6e-43  Score=285.81  Aligned_cols=243  Identities=19%  Similarity=0.223  Sum_probs=203.7

Q ss_pred             cCCCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTAS--TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         9 ~l~~k~vlItGa--~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      -|+||++|||||  ++|||+++|++|+++|++|++++|+.+++.   +++.+ .+.+...++||++++++++++++.+.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~---~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI---QRITDRLPAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHH---HHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHH---HHHHHHcCCceeeEeeecccccccccccchhhh
Confidence            478999999994  579999999999999999999999987543   23322 366788899999999999999999988


Q ss_pred             Hh---CCCCEEEEcCCCCCC----CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCCh
Q 025273           86 KF---GKIDVVVSNAAANPS----VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMA  158 (255)
Q Consensus        86 ~~---g~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~  158 (255)
                      .+   +.+|+++||+|+...    ..++.+.+.++|.+.+++|+.+.+...+...+.+.+. .+++++|.....+.+.+.
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~s~~~~~~~p~~~  158 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG-GSIVGMDFDPSRAMPAYN  158 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEEECCCSSCCTTTH
T ss_pred             ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccc-cccccccccccccCcccc
Confidence            75   578999999997532    3466778899999999999999999999998877654 455566667777888899


Q ss_pred             hhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCC----------hhHHHHHHhhcccCC-CCCHHHHH
Q 025273          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSN----------DGVRQTIEQNTLLNR-LGTTRDMA  226 (255)
Q Consensus       159 ~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~~~d~a  226 (255)
                      .|+++|+|+++|+|++++|+.+ +||||+|+||+++|++...+...          ....+......|+++ +++|+|++
T Consensus       159 ~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva  238 (268)
T d2h7ma1         159 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVA  238 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHH
T ss_pred             hhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            9999999999999999999998 99999999999999987655432          222234445567665 89999999


Q ss_pred             HHHHHhcCCCCCCccccEEEeCCCcccCC
Q 025273          227 AAAAFLASDDASYITGETLVVAGGMPSRL  255 (255)
Q Consensus       227 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                      +++.||+|+..+++||++|.+|||++.++
T Consensus       239 ~~v~fL~Sd~a~~iTG~~i~vDGG~~~~~  267 (268)
T d2h7ma1         239 KTVCALLSDWLPATTGDIIYADGGAHTQL  267 (268)
T ss_dssp             HHHHHHHSSSCTTCCSEEEEESTTGGGCC
T ss_pred             HHHHHHhCchhcCccCCEEEECcCccccc
Confidence            99999999999999999999999999875

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2.4e-43  Score=284.24  Aligned_cols=221  Identities=19%  Similarity=0.243  Sum_probs=183.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHH---HcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH--Hh
Q 025273           13 KVAIVTASTQGIGFGIAERLG---LEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE--KF   87 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~---~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~   87 (255)
                      |+||||||++|||+++|++|+   ++|++|++++|+.+.++.+.+ +...+.++.+++||++++++++++++++.+  .+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            789999999999999999997   479999999999998887754 444467999999999999999999999865  56


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-------------CCeEEEEcccCccC--
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------------GSSVVLISSIAGYQ--  152 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------------~~~iv~iss~~~~~--  152 (255)
                      +++|+||||||+......+.+.+.++|++++++|+.|++.++++++|+|++             .+++|+++|..+..  
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence            899999999998776677889999999999999999999999999999852             57999999988753  


Q ss_pred             -CCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHH
Q 025273          153 -PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAA  230 (255)
Q Consensus       153 -~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  230 (255)
                       +.+.+..|++||+|+.+|+++++.|+.+ ||+||+|+||+++|+|.....+                 .++++.++.++
T Consensus       162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~-----------------~~~~~~~~~i~  224 (248)
T d1snya_         162 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP-----------------LDVPTSTGQIV  224 (248)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCS-----------------BCHHHHHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCC-----------------CCchHHHHHHH
Confidence             4566789999999999999999999988 9999999999999998754321                 12333333333


Q ss_pred             HhcCCCCCCccccEEEeCCCc
Q 025273          231 FLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      .++.......+|+.|.+||+.
T Consensus       225 ~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         225 QTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHhcCccCCCcEEEECCeE
Confidence            333333334689999999875

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.4e-44  Score=286.42  Aligned_cols=221  Identities=15%  Similarity=0.155  Sum_probs=193.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC--
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG--   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--   88 (255)
                      +||+||||||++|||++++++|+++|++|++++++....          ......+.+|.++.++.+.+.+.+.+.++  
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            589999999999999999999999999999999886531          23556678899999999998888887764  


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ++|+||||||.........+.+.++|++++++|+.+++++.+.++|+|+++|+||++||.++..+.+.+.+|++||+|++
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  150 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVH  150 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHHH
Confidence            69999999997665566777888999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhC--C-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 025273          169 GLTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETL  245 (255)
Q Consensus       169 ~l~~~la~e~~--~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i  245 (255)
                      +|+|+|+.|+.  + |||||+|+||+++|++.+...+..          ...++.+|+++++.+.+|+++...+++|+.|
T Consensus       151 ~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~----------~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i  220 (236)
T d1dhra_         151 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA----------DFSSWTPLEFLVETFHDWITGNKRPNSGSLI  220 (236)
T ss_dssp             HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS----------CGGGSEEHHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred             HHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccc----------hhhcCCCHHHHHHHHHHHhCCCccCCCCCeE
Confidence            99999999986  4 999999999999999876543332          2345778999999999999999999999877


Q ss_pred             Ee--CCCc
Q 025273          246 VV--AGGM  251 (255)
Q Consensus       246 ~~--dgG~  251 (255)
                      .+  ++|.
T Consensus       221 ~v~~~~g~  228 (236)
T d1dhra_         221 QVVTTDGK  228 (236)
T ss_dssp             EEEEETTE
T ss_pred             EEEEECCE
Confidence            65  4444

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=5.1e-42  Score=279.23  Aligned_cols=236  Identities=31%  Similarity=0.397  Sum_probs=197.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHHHhc-CCeEEEEEecCCC----HHHHHHHHHHHHHHh
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKAR-GIEVIGVVCHVSN----GQQRKNLINQTIEKF   87 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~Dv~~----~~~v~~~~~~~~~~~   87 (255)
                      ++|||||++|||++++++|+++|++|++++|+.++ .+.+.+++... +.+....++|+.+    ++.++++++.+.+++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999998654 46667777655 5677777776654    567788888899999


Q ss_pred             CCCCEEEEcCCCCCCCCC----------ccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-------CCCeEEEEcccCc
Q 025273           88 GKIDVVVSNAAANPSVDS----------ILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-------KGSSVVLISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~----------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-------~~~~iv~iss~~~  150 (255)
                      |++|++|||||+..+...          ..+...+.+...+..|+.+.+...+...+.+.       ..+.++++++..+
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            999999999998653221          12234566788899999999999988887763       3467888999999


Q ss_pred             cCCCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCC-CCCHHHHHHH
Q 025273          151 YQPQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNR-LGTTRDMAAA  228 (255)
Q Consensus       151 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~a~~  228 (255)
                      ..+.+.+..|++||+|+++|+|++++|+.+ |||||+|+||+++|++..    .+...+.+....|+++ +++|+|++++
T Consensus       163 ~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~----~~~~~~~~~~~~pl~r~~~~peeva~~  238 (266)
T d1mxha_         163 DLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSEASAAQIADA  238 (266)
T ss_dssp             GSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS----CHHHHHHHHTTCTTTSCCBCHHHHHHH
T ss_pred             cccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC----CHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            999999999999999999999999999998 999999999999998653    3455566777778765 4799999999


Q ss_pred             HHHhcCCCCCCccccEEEeCCCccc
Q 025273          229 AAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       229 ~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +.||+|+..+++||++|.+|||++.
T Consensus       239 v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         239 IAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhCCccCCeEEECccHhh
Confidence            9999999999999999999999874

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.5e-42  Score=276.28  Aligned_cols=225  Identities=22%  Similarity=0.302  Sum_probs=188.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||++|||+++|++|+++|++|++++|+++.            .+....++|+++......+..+..... ..+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~   67 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEA-PLF   67 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHS-CEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------ccceEeeccccchhhhHHHHHhhhccc-ccc
Confidence            5899999999999999999999999999999998653            355678899999999999988876665 455


Q ss_pred             EEEEcCCCCCC---CCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc--------CCCeEEEEcccCccCCCCCChhh
Q 025273           92 VVVSNAAANPS---VDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ--------KGSSVVLISSIAGYQPQSSMAMY  160 (255)
Q Consensus        92 ~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--------~~~~iv~iss~~~~~~~~~~~~y  160 (255)
                      .++++++....   .......+.+.|++++++|+.+.+.+++.+.+.+.        +.|+||++||..+..+.+...+|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y  147 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY  147 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhh
Confidence            56666655332   23445567889999999999999999999988642        45799999999999999999999


Q ss_pred             HhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcc-cCCCCCHHHHHHHHHHhcCCCCC
Q 025273          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL-LNRLGTTRDMAAAAAFLASDDAS  238 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~a~~~~~l~s~~~~  238 (255)
                      +++|+|+++|+|+++.|+.+ |||||+|+||+++|++.....  +..........+ .+|+++|+|+|+++.||+|  ++
T Consensus       148 ~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s--~~  223 (241)
T d1uaya_         148 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP--EKAKASLAAQVPFPPRLGRPEEYAALVLHILE--NP  223 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC--HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH--CT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh--hhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--CC
Confidence            99999999999999999998 999999999999999886543  233333334444 4899999999999999997  46


Q ss_pred             CccccEEEeCCCccc
Q 025273          239 YITGETLVVAGGMPS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      ++|||+|.+|||++.
T Consensus       224 ~iTG~~i~VDGG~~m  238 (241)
T d1uaya_         224 MLNGEVVRLDGALRM  238 (241)
T ss_dssp             TCCSCEEEESTTCCC
T ss_pred             CCCCCEEEECCcccC
Confidence            899999999999864

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-41  Score=277.17  Aligned_cols=213  Identities=23%  Similarity=0.274  Sum_probs=188.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.++.+.+++... +.....+.+|+++.++++..++.+.+.+|
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999999999999988886554 77899999999999999999999999999


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      .+|+++||||... ..++.+.+.++|++++++|+.+++.+++.++|+|+ +.|+||++||.++..+.+.+..|++||+|+
T Consensus        92 ~~~~li~nag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asKaal  170 (269)
T d1xu9a_          92 GLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFAL  170 (269)
T ss_dssp             SCSEEEECCCCCC-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred             Ccccccccccccc-ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHHHHH
Confidence            9999999999876 57778889999999999999999999999999997 578999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC---CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhc
Q 025273          168 LGLTKALAAEMAP---DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLA  233 (255)
Q Consensus       168 ~~l~~~la~e~~~---~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  233 (255)
                      ++|+++|+.|+.+   +|+||+|+||+++|++.........          .....+|++++..++...
T Consensus       171 ~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~~----------~~~~~~~e~~a~~i~~~~  229 (269)
T d1xu9a_         171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV----------HMQAAPKEECALEIIKGG  229 (269)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGG----------GGGCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCCc----------cccCCCHHHHHHHHHHHh
Confidence            9999999999853   6999999999999998654332211          112346888887776544

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5e-41  Score=270.93  Aligned_cols=219  Identities=20%  Similarity=0.258  Sum_probs=178.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +.|+||||||++|||++++++|+++|+  +|++++|+.++++.+++   ..+.++.+++||+++.++++++++++.+.++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            359999999999999999999999996  58889999988776543   2356899999999999999999999999876


Q ss_pred             --CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC-------------CCeEEEEcccCccC-
Q 025273           89 --KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK-------------GSSVVLISSIAGYQ-  152 (255)
Q Consensus        89 --~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------------~~~iv~iss~~~~~-  152 (255)
                        .+|+||||||+.....++.+.+.++|++++++|+.|++.+++.++|+|++             .+.++++++..... 
T Consensus        79 ~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~  158 (250)
T d1yo6a1          79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence              49999999998765677888999999999999999999999999999852             36789988876543 


Q ss_pred             ------CCCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHH
Q 025273          153 ------PQSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDM  225 (255)
Q Consensus       153 ------~~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  225 (255)
                            +..+..+|++||+|+.+|+++|+.|+.+ ||+||+|+||+++|+|....                 ...+|++.
T Consensus       159 ~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~-----------------~~~~~e~~  221 (250)
T d1yo6a1         159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-----------------AALTVEQS  221 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------HHH
T ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC-----------------CCCCHHHH
Confidence                  2344567999999999999999999988 99999999999999986421                 12478999


Q ss_pred             HHHHHHhcCCCCCCccccEEEeCC
Q 025273          226 AAAAAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       226 a~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                      ++.++..+.......+|+.+..||
T Consensus       222 a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         222 TAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHHHHHhcCCCCCCeEEECCCC
Confidence            988888887766667899988775

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.8e-41  Score=271.07  Aligned_cols=216  Identities=20%  Similarity=0.187  Sum_probs=184.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--CC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--GK   89 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~   89 (255)
                      .++||||||++|||++++++|+++|++|++++|+.++.          ......+.+|+.+.+......+.+.+.+  ++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            35679999999999999999999999999999987531          2355566789988888888887777754  78


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      +|+||||||......+..+.+.+.|+.++++|+.+++.+.++++|+|+++++||++||..+..+.+.+.+|++||+|+++
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  151 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHH  151 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHHH
Confidence            99999999987645566667778899999999999999999999999988999999999999999999999999999999


Q ss_pred             HHHHHHHHhC--C-CeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHH-HhcCCCCCCccccEE
Q 025273          170 LTKALAAEMA--P-DTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAA-FLASDDASYITGETL  245 (255)
Q Consensus       170 l~~~la~e~~--~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~-~l~s~~~~~~~G~~i  245 (255)
                      |+++|+.|+.  + +|++|+|+||+++|++.+...+..          ...++.+|+++++.++ |+.++..+.++|+.+
T Consensus       152 l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~----------~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i  221 (235)
T d1ooea_         152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA----------DHSSWTPLSFISEHLLKWTTETSSRPSSGALL  221 (235)
T ss_dssp             HHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTC----------CGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred             HHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCC----------ccccCCCHHHHHHHHHHHhcCccccCCCceEE
Confidence            9999999986  3 899999999999999876554322          2345679999999876 566666778999999


Q ss_pred             Ee
Q 025273          246 VV  247 (255)
Q Consensus       246 ~~  247 (255)
                      .+
T Consensus       222 ~v  223 (235)
T d1ooea_         222 KI  223 (235)
T ss_dssp             EE
T ss_pred             EE
Confidence            88

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.6e-39  Score=261.89  Aligned_cols=215  Identities=26%  Similarity=0.362  Sum_probs=161.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-GKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~~d   91 (255)
                      |+||||||++|||++++++|+++|++|++++|+.++                 ..+|+++.+..+....++..+. +.+|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            789999999999999999999999999999998643                 3579999999888877666554 5799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccC--CCeEEEEccc---------------------
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSI---------------------  148 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~iss~---------------------  148 (255)
                      +++||||+...        .+.+.+...+|..+...+.+...+.+.+  ...+.++++.                     
T Consensus        65 ~lv~~Ag~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  136 (257)
T d1fjha_          65 GLVLCAGLGPQ--------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             EEEECCCCCTT--------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             EEEEcCCCCCc--------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcE
Confidence            99999997542        1237788899999999999988876642  2344444332                     


Q ss_pred             ------CccCC-CCCChhhHhhHHHHHHHHHHHHHHhCC-CeeEEEEeCCcccCCccccccCChhHHHHH-HhhcccCCC
Q 025273          149 ------AGYQP-QSSMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAEYITSNDGVRQTI-EQNTLLNRL  219 (255)
Q Consensus       149 ------~~~~~-~~~~~~y~~sK~a~~~l~~~la~e~~~-~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~  219 (255)
                            .+..+ .++..+|++||+|+++|+|+++.|+.+ |||||+|+||+++|++.......+...+.. ....|++|+
T Consensus       137 ~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~  216 (257)
T d1fjha_         137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRR  216 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSC
T ss_pred             EEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCC
Confidence                  22221 223457999999999999999999998 999999999999999987766554444433 334689999


Q ss_pred             CCHHHHHHHHHHhcCCCCCCccccEEEeCCCcc
Q 025273          220 GTTRDMAAAAAFLASDDASYITGETLVVAGGMP  252 (255)
Q Consensus       220 ~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++|+|+++++.||+|+.++++|||+|.+|||++
T Consensus       217 g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~t  249 (257)
T d1fjha_         217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEeCCCcc
Confidence            999999999999999999999999999999985

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=100.00  E-value=2.1e-32  Score=221.33  Aligned_cols=213  Identities=18%  Similarity=0.144  Sum_probs=170.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCc---hhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQ---KNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++|||||++|||++++++|+++|++ |++++|+.   +..+.+.+++...+.++.+++||+++.++++++++.+.+. 
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence            679999999999999999999999995 88899874   4566677777777889999999999999999999987554 


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +++|.+|||+|... ..++.+.+.++|++++++|+.+++++.+.+.+  .+.++||++||..+..+.+.+..|+++|+++
T Consensus        88 ~~i~~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~--~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l  164 (259)
T d2fr1a1          88 VPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFSSFASAFGAPGLGGYAPGNAYL  164 (259)
T ss_dssp             SCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEEEHHHHTCCTTCTTTHHHHHHH
T ss_pred             cccccccccccccc-ccccccccHHHHHHHhhhhccchhHHHHHhhc--cCCceEeeecchhhccCCcccHHHHHHHHhH
Confidence            58999999999876 67889999999999999999999999887654  2557999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      +.|++.++.+   |+++++|+||++.++.+..    ......+... - -...+|++++..+..++....
T Consensus       165 ~~la~~~~~~---Gi~v~~I~pg~~~~~g~~~----~~~~~~~~~~-G-~~~~~~~~~~~~l~~~l~~~~  225 (259)
T d2fr1a1         165 DGLAQQRRSD---GLPATAVAWGTWAGSGMAE----GPVADRFRRH-G-VIEMPPETACRALQNALDRAE  225 (259)
T ss_dssp             HHHHHHHHHT---TCCCEEEEECCBC----------------CTTT-T-EECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhC---CCCEEECCCCcccCCcccc----chHHHHHHhc-C-CCCCCHHHHHHHHHHHHhCCC
Confidence            9998877654   8999999999887643321    1111111110 0 123589999998888776543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=3.8e-24  Score=180.13  Aligned_cols=226  Identities=17%  Similarity=0.095  Sum_probs=159.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-----hHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-----NVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      |+||||||+|.||++++++|+++|++|++++|...     .++.+..+......++.++++|+++.++++++++.+    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            78999999999999999999999999999999643     222333332233568999999999999999999876    


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhc-ccCCCeEEEEcccCccC-----------CCC
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPH-LQKGSSVVLISSIAGYQ-----------PQS  155 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~iv~iss~~~~~-----------~~~  155 (255)
                       .+|+++|+|+......     +.++.+..+++|+.|+.++++++... .++..++|++||...+.           +..
T Consensus        78 -~~d~v~h~aa~~~~~~-----~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~  151 (357)
T d1db3a_          78 -QPDEVYNLGAMSHVAV-----SFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFY  151 (357)
T ss_dssp             -CCSEEEECCCCCTTTT-----TTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCC
T ss_pred             -CCCEEEEeecccccch-----hhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCC
Confidence             7999999999865322     22335667899999999999998765 34556899999876431           234


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHH---hh----------cccCCCCCH
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIE---QN----------TLLNRLGTT  222 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~---~~----------~~~~~~~~~  222 (255)
                      +...|+.+|.+.+.+++.+++.+  ++.+..+.|+.+..|..........+...+.   ..          ...+.+...
T Consensus       152 P~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v  229 (357)
T d1db3a_         152 PRSPYAVAKLYAYWITVNYRESY--GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHA  229 (357)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHh--CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceee
Confidence            56789999999999999999887  6788889998887774321111111111111   11          111236679


Q ss_pred             HHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          223 RDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       223 ~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +|+++++..++...    .++.+++.+|...+
T Consensus       230 ~D~~~a~~~~~~~~----~~~~yni~sg~~~s  257 (357)
T d1db3a_         230 KDYVKMQWMMLQQE----QPEDFVIATGVQYS  257 (357)
T ss_dssp             HHHHHHHHHTTSSS----SCCCEEECCCCCEE
T ss_pred             chHHHHHHHHHhCC----CCCeEEECCCCcee
Confidence            99999998887543    46788998887643

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.86  E-value=3.2e-20  Score=154.93  Aligned_cols=228  Identities=17%  Similarity=0.092  Sum_probs=157.7

Q ss_pred             cccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHH
Q 025273            3 KMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus         3 ~~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      +|.+.--.+||+||||||+|.||++++++|+++|++|+++.|+.+....+.......  ......+..|+++.+++.+++
T Consensus         2 ~~~~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (342)
T d1y1pa1           2 KIDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             CSTTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CCCCCCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc
Confidence            445544467999999999999999999999999999999999987766665543322  334556778999999877765


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-------
Q 025273           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-------  153 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-------  153 (255)
                      .       ..|.++|+++....     ..+   ....+..|+.|+.++++.+.... .-.++|++||..+...       
T Consensus        82 ~-------~~~~v~~~a~~~~~-----~~~---~~~~~~~nv~gt~~ll~~~~~~~-~v~~~i~~SS~~~~~~~~~~~~~  145 (342)
T d1y1pa1          82 K-------GAAGVAHIASVVSF-----SNK---YDEVVTPAIGGTLNALRAAAATP-SVKRFVLTSSTVSALIPKPNVEG  145 (342)
T ss_dssp             T-------TCSEEEECCCCCSC-----CSC---HHHHHHHHHHHHHHHHHHHHTCT-TCCEEEEECCGGGTCCCCTTCCC
T ss_pred             c-------cchhhhhhcccccc-----ccc---ccccccchhhhHHHHHHhhhccc-ccccccccccceeeccCCCCCCC
Confidence            4       68999999986541     122   34567889999999999887642 3458999999654211       


Q ss_pred             ------------------------CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHH
Q 025273          154 ------------------------QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQT  209 (255)
Q Consensus       154 ------------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~  209 (255)
                                              ..+...|+.+|.+.+.+++.++++...++++..++|+.+..|..............
T Consensus       146 ~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~  225 (342)
T d1y1pa1         146 IYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGW  225 (342)
T ss_dssp             CEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHH
T ss_pred             ccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHH
Confidence                                    11234699999999999999999987788888999988876643222221111111


Q ss_pred             HH---h--------hcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeC
Q 025273          210 IE---Q--------NTLLNRLGTTRDMAAAAAFLASDDASYITGETLVVA  248 (255)
Q Consensus       210 ~~---~--------~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      ..   .        ......+..++|+|.+++..+....  ..|+.+...
T Consensus       226 ~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~--~~g~~~~~~  273 (342)
T d1y1pa1         226 MMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQ--IERRRVYGT  273 (342)
T ss_dssp             HHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTT--CCSCEEEEC
T ss_pred             HHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCcc--ccceEEEEc
Confidence            11   1        1112225678999998776664432  356655443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=8e-21  Score=158.36  Aligned_cols=229  Identities=14%  Similarity=0.079  Sum_probs=155.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ++||||||+|.||++++++|+++|++|++++|............. ....++.++++|+++.+.++++++..     ++|
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence            459999999999999999999999999999864322111111111 12458889999999999999888764     799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC------------CCCChh
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP------------QSSMAM  159 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~------------~~~~~~  159 (255)
                      ++||+|+....     ..+.++.++.+++|+.|+.++++++...-  -.++|++||...+.+            ..+...
T Consensus        76 ~ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~--v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~  148 (338)
T d1udca_          76 TVIHFAGLKAV-----GESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSP  148 (338)
T ss_dssp             EEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred             EEEECCCccch-----hhHHhCHHHHHHhHHHHHHHHHHHHHHhC--CCEEEecCcceEEccccccccccccccCCCcch
Confidence            99999996431     12233456889999999999999887652  348999998776522            235778


Q ss_pred             hHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC------ChhHHHHHHhh-----c--------------
Q 025273          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS------NDGVRQTIEQN-----T--------------  214 (255)
Q Consensus       160 y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~-----~--------------  214 (255)
                      |+.+|.+.+.+++....+.. ++.+..++|+.+.++.......      ...+...+...     .              
T Consensus       149 Y~~sK~~~e~~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g  227 (338)
T d1udca_         149 YGKSKLMVEQILTDLQKAQP-DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG  227 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHST-TCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTS
T ss_pred             HHHHHhhhhHHHHHHHhhcc-CCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCC
Confidence            99999999999998887753 5677778887776653321110      11121111110     0              


Q ss_pred             -ccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          215 -LLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       215 -~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                       ..+.+...+|++.+...+.........++++++.++...+
T Consensus       228 ~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~s  268 (338)
T d1udca_         228 TGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS  268 (338)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEE
T ss_pred             CceeeEEEEeehhhhccccccccccccCcceeeecCCCCCc
Confidence             0122456788887665544333333467889998877653

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.85  E-value=4.8e-21  Score=161.18  Aligned_cols=225  Identities=13%  Similarity=0.039  Sum_probs=158.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeE-EEEeCCchhHHH-HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASV-VVSSRKQKNVDE-AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V-~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++||||||+|.||++++++|++.|++| +++++....... ..+.+ ....++.++.+|+++.+.++++++..     ++
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence            469999999999999999999999984 445543222110 00111 11458899999999999999988765     79


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-------CCCeEEEEcccCccC-----------
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-------KGSSVVLISSIAGYQ-----------  152 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-------~~~~iv~iss~~~~~-----------  152 (255)
                      |++||+|+....     ..+.++...++++|+.|+.++++.+.....       ...++|++||...+.           
T Consensus        75 d~VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (361)
T d1kewa_          75 DAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             SEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             CEEEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccc
Confidence            999999996431     112234467899999999999998876532       234899999977552           


Q ss_pred             ----------CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhccc---C--
Q 025273          153 ----------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLL---N--  217 (255)
Q Consensus       153 ----------~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~--  217 (255)
                                +..+...|+.+|.+.+.+++.++..+  ++.+..+.|+.+..|....-.--+.+........+.   +  
T Consensus       150 ~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~--~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g  227 (361)
T d1kewa_         150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY--GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTS
T ss_pred             cCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCC
Confidence                      12345679999999999999999887  688888999888876442110012222222222221   1  


Q ss_pred             ----CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          218 ----RLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       218 ----~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                          .++..+|+++++..++....   .|+.+++.+|...
T Consensus       228 ~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~~  264 (361)
T d1kewa_         228 DQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNEK  264 (361)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             CeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCCc
Confidence                24678999999988886543   3778999887654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.85  E-value=2.6e-19  Score=151.93  Aligned_cols=175  Identities=14%  Similarity=0.113  Sum_probs=132.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch----------------hHHHHHHHHHh-cCCeEEEEEecCCCHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK----------------NVDEAVVKLKA-RGIEVIGVVCHVSNGQ   74 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~----------------~~~~~~~~~~~-~~~~~~~~~~Dv~~~~   74 (255)
                      ||+||||||+|.||.+++++|+++|+.|+++|.-..                ........... .+.++.++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            789999999999999999999999999999872111                11111122222 2568899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC--
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ--  152 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~--  152 (255)
                      .++++++..     ++|+|+|.|+...  ......+.+.....+++|+.|+.++++.+...- ....+++.||...+.  
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~~i~~ss~~~~~~~  152 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTP  152 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCC
T ss_pred             HHHHHHHhh-----cchheeccccccc--cccccccccccccccccccccccHHHHHHHHhc-cccceeecccccccccc
Confidence            999998876     7999999998753  233445567778889999999999999887543 234677777765431  


Q ss_pred             ----------------------CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCc
Q 025273          153 ----------------------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (255)
Q Consensus       153 ----------------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~  196 (255)
                                            +..+...|+.+|.+.+.+++.++.++  ++++..+.|+.+..+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~--~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         153 NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             SSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECSC
T ss_pred             ccccccccccccccccccccccccccccHHHHHhhhhccccccccccc--ceeeeecccccccCCC
Confidence                                  23445679999999999999988887  6788888888776653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.5e-19  Score=150.72  Aligned_cols=212  Identities=14%  Similarity=0.036  Sum_probs=146.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-----HHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-----VDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      |++|||||+|.||++++++|.++|++|+.++|....     ++.+...... ...++.++++|+++.+.+..++.+.   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            344999999999999999999999999999996432     1211111111 1357899999999999999998876   


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccC-----------CC
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQ-----------PQ  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~-----------~~  154 (255)
                        .++.++|+++....     ....+.....+++|+.|+.++++++..+.. +..++|++||.+.+.           +.
T Consensus        79 --~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~  151 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPF  151 (347)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCC
T ss_pred             --ccceeeeeeecccc-----chhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCC
Confidence              79999999886431     122334556789999999999999887643 456899999876541           23


Q ss_pred             CCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHH----HHHhh---------cccCCCCC
Q 025273          155 SSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQ----TIEQN---------TLLNRLGT  221 (255)
Q Consensus       155 ~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~----~~~~~---------~~~~~~~~  221 (255)
                      .+...|+.||.+.|.+++.++..+  ++.+..+.|+.+..|-............    .....         ...+.+..
T Consensus       152 ~P~~~Yg~sK~~aE~~~~~~~~~~--~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~  229 (347)
T d1t2aa_         152 YPRSPYGAAKLYAYWIVVNFREAY--NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH  229 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeE
Confidence            456789999999999999998887  5677778887777653221111111111    11111         11224678


Q ss_pred             HHHHHHHHHHhcCCC
Q 025273          222 TRDMAAAAAFLASDD  236 (255)
Q Consensus       222 ~~d~a~~~~~l~s~~  236 (255)
                      .+|++.++..++...
T Consensus       230 v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         230 AKDYVEAMWLMLQND  244 (347)
T ss_dssp             HHHHHHHHHHHHHSS
T ss_pred             ecHHHHHHHHHhhcC
Confidence            899999998887554

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.83  E-value=3.5e-22  Score=153.42  Aligned_cols=153  Identities=16%  Similarity=0.117  Sum_probs=113.4

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ..+|+||++|||||+||||+++++.|+++|++|++++|+.++++.+.+++... .++.+..+|+++.+++++++      
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~------   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV------   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT------
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh------
Confidence            45799999999999999999999999999999999999999999888887654 24456789999999987765      


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc-CCCeEEEEcccCccCC-CCCChhhHhhH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQP-QSSMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~-~~~~~~y~~sK  164 (255)
                       +++|+||||||...     ...+.++|++.+++|+.+.++....+...+. .......+++.....+ ..+...|+.+|
T Consensus        91 -~~iDilin~Ag~g~-----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~y~~sk  164 (191)
T d1luaa1          91 -KGAHFVFTAGAIGL-----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHR  164 (191)
T ss_dssp             -TTCSEEEECCCTTC-----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTEEEECHHHHHHHHHHHHH
T ss_pred             -cCcCeeeecCcccc-----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecceEEEeccCcCcHHHHHHH
Confidence             48999999999632     4568899999999998887766544332221 1122233332222111 11234699999


Q ss_pred             HHHHHHHH
Q 025273          165 TALLGLTK  172 (255)
Q Consensus       165 ~a~~~l~~  172 (255)
                      +++..|++
T Consensus       165 ~a~~~l~~  172 (191)
T d1luaa1         165 ACIAKLFE  172 (191)
T ss_dssp             HHHHHHTS
T ss_pred             HHHHHHHh
Confidence            99987764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.83  E-value=1.6e-19  Score=149.01  Aligned_cols=222  Identities=14%  Similarity=0.019  Sum_probs=153.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHH-HHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD-EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |+||||||+|.||++++++|+++|++|+.++|...... .-.+.+ ....++.++++|+++.+.+.+.+...     .++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~   74 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMADACSVQRAVIKA-----QPQ   74 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT-TCGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHh-cccCCcEEEEccccChHHhhhhhccc-----ccc
Confidence            78999999999999999999999999999998754311 111111 12357899999999999999888776     788


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-----------CCCCCChhh
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQSSMAMY  160 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-----------~~~~~~~~y  160 (255)
                      +++|+++.....     ...+.....+..|+.|+.++++++...-. ..++++.||...+           .+..+...|
T Consensus        75 ~~~~~a~~~~~~-----~~~~~~~~~~~~n~~g~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y  148 (321)
T d1rpna_          75 EVYNLAAQSFVG-----ASWNQPVTTGVVDGLGVTHLLEAIRQFSP-ETRFYQASTSEMFGLIQAERQDENTPFYPRSPY  148 (321)
T ss_dssp             EEEECCSCCCHH-----HHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHH
T ss_pred             cccccccccccc-----ccccchHHHHhhhhhchHHHHHHHHHhCC-CcccccccchhhcCcccCCCCCCCCCccccChh
Confidence            999998764311     11123467789999999999998876432 2367777765432           223467889


Q ss_pred             HhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHH---HHHHh-hc---------ccCCCCCHHHHHH
Q 025273          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVR---QTIEQ-NT---------LLNRLGTTRDMAA  227 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~---~~~~~-~~---------~~~~~~~~~d~a~  227 (255)
                      +.+|.+.+.+++.++.++  ++++..+.|+.+..|..........+.   .+... ..         ..+.+...+|+++
T Consensus       149 ~~sK~~~E~~~~~~~~~~--~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~  226 (321)
T d1rpna_         149 GVAKLYGHWITVNYRESF--GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE  226 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhc--CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHH
Confidence            999999999999999887  577788888777666432111001111   11111 11         1123678899999


Q ss_pred             HHHHhcCCCCCCccccEEEeCCCcc
Q 025273          228 AAAFLASDDASYITGETLVVAGGMP  252 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++..++....    +..+++.+|..
T Consensus       227 ~~~~~~~~~~----~~~~ni~~~~~  247 (321)
T d1rpna_         227 AMWLMLQQDK----ADDYVVATGVT  247 (321)
T ss_dssp             HHHHHHHSSS----CCCEEECCSCE
T ss_pred             HHHHHHhcCC----cCCceeccccc
Confidence            9998875543    34567777654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.82  E-value=5.6e-19  Score=147.13  Aligned_cols=227  Identities=16%  Similarity=0.025  Sum_probs=159.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch----hHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK----NVDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      .+.|++|||||+|.||++++++|.++|++|++++|...    ..+....... .....+.++.+|+.+.........   
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc---
Confidence            34689999999999999999999999999999987332    1222211111 113578999999999887665533   


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------C
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------P  153 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~  153 (255)
                          ..+.++|.++....     ..+.++....+++|+.|+.++++++...-  ..++|++||...+.           +
T Consensus        91 ----~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~--~~~~i~~SS~~vyg~~~~~~~~E~~~  159 (341)
T d1sb8a_          91 ----GVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDAK--VQSFTYAASSSTYGDHPGLPKVEDTI  159 (341)
T ss_dssp             ----TCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGTTCCCSSBCTTCC
T ss_pred             ----cccccccccccccc-----cccccCccchhheeehhHHHHHHHHHhcC--CceEEEcccceeeCCCCCCCccCCCC
Confidence                78999999875431     12355677889999999999999887653  34899999987642           2


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHH----HHHHhhc---------ccCCCC
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVR----QTIEQNT---------LLNRLG  220 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~----~~~~~~~---------~~~~~~  220 (255)
                      ..+...|+.+|.+.+.+++.+++..  ++++..+.|+.+.++..........+.    .......         ..+.+.
T Consensus       160 ~~p~~~Y~~sK~~~E~~~~~~~~~~--~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i  237 (341)
T d1sb8a_         160 GKPLSPYAVTKYVNELYADVFSRCY--GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC  237 (341)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHh--CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEE
Confidence            3456899999999999999999887  678888888877765432222111111    1111111         123466


Q ss_pred             CHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          221 TTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       221 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ..+|++.++..++..... ..|+.+++.++...
T Consensus       238 ~v~D~~~a~~~~~~~~~~-~~~~~~~~~~~~~~  269 (341)
T d1sb8a_         238 YIENTVQANLLAATAGLD-ARNQVYNIAVGGRT  269 (341)
T ss_dssp             EHHHHHHHHHHHHTCCGG-GCSEEEEESCSCCE
T ss_pred             EEeccchhhhhhhhcccc-ccceeeeecccccc
Confidence            789999998877755433 45788888776554

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=3.9e-19  Score=148.44  Aligned_cols=170  Identities=18%  Similarity=0.115  Sum_probs=127.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |+||||||+|.||++++++|+++|++|+++++.... .......-.....++.++++|+++.++++.+++..     ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            689999999999999999999999999999763221 11111111112457888899999999999988754     799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC---------------CCCC
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ---------------PQSS  156 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~---------------~~~~  156 (255)
                      ++||+|+.....     ...+.....+.+|+.++.++++++...-  -.+++++||...+.               +..+
T Consensus        77 ~VihlAa~~~~~-----~~~~~~~~~~~~N~~~t~~ll~~~~~~~--i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p  149 (347)
T d1z45a2          77 SVIHFAGLKAVG-----ESTQIPLRYYHNNILGTVVLLELMQQYN--VSKFVFSSSATVYGDATRFPNMIPIPEECPLGP  149 (347)
T ss_dssp             EEEECCSCCCHH-----HHHHSHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCC
T ss_pred             EEEEcccccccc-----ccccCcccccccchhhhHHHHHHHHhcc--cceEEeecceeeecCcccCCCCCccccccCCCC
Confidence            999999975311     1223345678899999999999886542  34899999976542               2335


Q ss_pred             ChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccC
Q 025273          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPT  194 (255)
Q Consensus       157 ~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t  194 (255)
                      ...|+.+|.+.+.+++.+......++.+..+.|+.+..
T Consensus       150 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         150 TNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIG  187 (347)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEEC
T ss_pred             CChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEe
Confidence            66899999999999999887765577777777765554

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.81  E-value=8.7e-19  Score=145.57  Aligned_cols=213  Identities=14%  Similarity=0.050  Sum_probs=147.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch-----hHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK-----NVDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      |++|||||+|.||++++++|+++|++|+.++|..+     ....+..... .....+.++.+|+++.++++..++..   
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~---   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence            89999999999999999999999999999998532     1121111111 12457889999999999999988765   


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcccCcc----------CC
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISSIAGY----------QP  153 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss~~~~----------~~  153 (255)
                        ++|++||+|+....     ....+.....+..|+.+..++..++.....   ...++++.||....          .+
T Consensus        79 --~~D~Vih~Aa~~~~-----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~  151 (339)
T d1n7ha_          79 --KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  151 (339)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             --ccchhhhccccccc-----cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence              89999999997541     122344567789999999999888865432   23356666665432          22


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHh----hc---------ccCCCC
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ----NT---------LLNRLG  220 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~----~~---------~~~~~~  220 (255)
                      ..+...|+.+|.+.+.+++.+++.+  ++.+..+.|+.+..|.................    ..         ..+.+.
T Consensus       152 ~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~  229 (339)
T d1n7ha_         152 FHPRSPYAASKCAAHWYTVNYREAY--GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWG  229 (339)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECE
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHh--CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccce
Confidence            3467789999999999999998887  68889999988887753321111111111111    00         111256


Q ss_pred             CHHHHHHHHHHhcCCCC
Q 025273          221 TTRDMAAAAAFLASDDA  237 (255)
Q Consensus       221 ~~~d~a~~~~~l~s~~~  237 (255)
                      ..+|++.++..++....
T Consensus       230 ~v~D~a~~~~~~~~~~~  246 (339)
T d1n7ha_         230 FAGDYVEAMWLMLQQEK  246 (339)
T ss_dssp             EHHHHHHHHHHHHTSSS
T ss_pred             eeehHHHHHHHHHhcCC
Confidence            78999999888886654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=7.9e-19  Score=146.44  Aligned_cols=229  Identities=14%  Similarity=0.039  Sum_probs=154.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC------chhHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRK------QKNVDEAVVKLK-ARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~------~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      |+||||||+|.||++++++|+++|+.|+++++.      ........+.+. ....++.++++|++|.+.+++++...  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY--   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc--
Confidence            789999999999999999999999999998742      111111111121 12568899999999999998887654  


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC------------
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP------------  153 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~------------  153 (255)
                         .++.++|+|+....     ..+.++..+.+++|+.++.++++++...-  -.+++++||...+..            
T Consensus        81 ---~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~--v~~~i~~ss~~~~~~~~~~~~~~~~~~  150 (346)
T d1ek6a_          81 ---SFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMKAHG--VKNLVFSSSATVYGNPQYLPLDEAHPT  150 (346)
T ss_dssp             ---CEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             ---ccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchhhhcC--cccccccccceeeeccccccccccccc
Confidence               78899999997541     12233456788999999999998876542  237999888765421            


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcccccc------CChhHHHHHHh-----hc--------
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYIT------SNDGVRQTIEQ-----NT--------  214 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~-----~~--------  214 (255)
                      ..+..+|+.+|...+..++.+++... +.....+.|+.+.++......      ....+......     ..        
T Consensus       151 ~~~~~~Y~~~k~~~e~~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~  229 (346)
T d1ek6a_         151 GGCTNPYGKSKFFIEEMIRDLCQADK-TWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGND  229 (346)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHCT-TCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSC
T ss_pred             cccCChHHHHHHHHHHHHHHHHHhcc-CCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCc
Confidence            23456899999999999998876532 566777777766654322111      11111111110     00        


Q ss_pred             -------ccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          215 -------LLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       215 -------~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                             ..+.+..++|++.++..++........++++++.+|...+
T Consensus       230 ~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s  276 (346)
T d1ek6a_         230 YDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS  276 (346)
T ss_dssp             SSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred             ccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCccc
Confidence                   0123678999998877765444444568899999887653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.80  E-value=2.4e-18  Score=142.55  Aligned_cols=223  Identities=15%  Similarity=0.059  Sum_probs=143.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      +||||||+|.||++++++|+++|++|+++++-................++.++.+|+++.+++.++++..     ++|.+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            5999999999999999999999999999875332222111111223468899999999999999988866     79999


Q ss_pred             EEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC---------------------
Q 025273           94 VSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ---------------------  152 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~---------------------  152 (255)
                      ||+|+....     ....++.+..+++|+.|+.++++++...-  ..+.++.||..+..                     
T Consensus        77 ih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~~~--~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (338)
T d1orra_          77 FHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYN--SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKP  149 (338)
T ss_dssp             EECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCT
T ss_pred             Eeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhccc--ccccccccccccccccccccccccccccccccccc
Confidence            999997541     11223456788999999999999876542  23445555443221                     


Q ss_pred             -------CCCCChhhHhhHHHHHHHHHHHHHHhCC-C--eeEEEEeCCcccCCccccccCChhHHHHHHh-h--------
Q 025273          153 -------PQSSMAMYGVTKTALLGLTKALAAEMAP-D--TRVNCVAPGFVPTHFAEYITSNDGVRQTIEQ-N--------  213 (255)
Q Consensus       153 -------~~~~~~~y~~sK~a~~~l~~~la~e~~~-~--v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~--------  213 (255)
                             +..+...|+.+|...+.+.......+.. .  ++...+.++...........  ..+...... .        
T Consensus       150 ~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  227 (338)
T d1orra_         150 NGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWV--GWFCQKAVEIKNGINKPFT  227 (338)
T ss_dssp             TCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHH--HHHHHHHHHHHTTCCCCEE
T ss_pred             cCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeecccccccccccc--chhhHHHHHHHhccCCceE
Confidence                   1234678999999999999999888854 1  12222332322221111110  111111110 0        


Q ss_pred             -----cccCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCc
Q 025273          214 -----TLLNRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       214 -----~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                           ...+.+...+|++.+++.++... ...+|+++++.+|.
T Consensus       228 ~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~~  269 (338)
T d1orra_         228 ISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTI  269 (338)
T ss_dssp             EESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCG
T ss_pred             EeCCCceeEeeecccchhhHHHHHHhcc-ccccCccccccccc
Confidence                 11123556899999988877443 23568888887664

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.80  E-value=8.3e-19  Score=147.26  Aligned_cols=218  Identities=15%  Similarity=0.055  Sum_probs=154.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++++||||||+|.||++++++|.++|++|+++++....-.      ........+..+|+.+.+.+.++++       .+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   80 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVTE-------GV   80 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcccCcEEEeechhHHHHHHHhh-------cC
Confidence            4788999999999999999999999999999987644311      0111244567789999888766554       79


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC------------------
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------------  152 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------------------  152 (255)
                      |.+||+|+.....    ....+.....+.+|+.++.+++.++...-.  .++|++||...+.                  
T Consensus        81 d~Vih~a~~~~~~----~~~~~~~~~~~~~n~~gt~~ll~~~~~~~v--k~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~  154 (363)
T d2c5aa1          81 DHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMIEAARINGI--KRFFYASSACIYPEFKQLETTNVSLKESDAW  154 (363)
T ss_dssp             SEEEECCCCCCCH----HHHTTCHHHHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred             CeEeecccccccc----cccccccccccccccchhhHHHHhHHhhCc--cccccccccccccccccccccccccccccCC
Confidence            9999999875421    111233566788999999999998876533  4899999977642                  


Q ss_pred             CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHH-----HHHhh---------cccCC
Q 025273          153 PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQ-----TIEQN---------TLLNR  218 (255)
Q Consensus       153 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~-----~~~~~---------~~~~~  218 (255)
                      +..+...|+.+|.+.+.+++.+.+++  ++++..+.|+.+..+.............     .....         ...+.
T Consensus       155 ~~~p~~~Yg~sK~~~E~~~~~~~~~~--gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd  232 (363)
T d2c5aa1         155 PAEPQDAFGLEKLATEELCKHYNKDF--GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRS  232 (363)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEEC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEE
Confidence            12346689999999999999999887  7888899998887764322221111111     11111         11334


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCccccEEEeCCCccc
Q 025273          219 LGTTRDMAAAAAFLASDDASYITGETLVVAGGMPS  253 (255)
Q Consensus       219 ~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++..+|++.++..++...    .++.+++.+|...
T Consensus       233 ~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~  263 (363)
T d2c5aa1         233 FTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  263 (363)
T ss_dssp             CEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             EeehhHHHHHHHHHHhCC----CCCeEEEecCCcc
Confidence            677899999998887543    3677899888664

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=5.1e-19  Score=147.35  Aligned_cols=218  Identities=12%  Similarity=0.073  Sum_probs=152.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ++||||||+|.||++++++|+++| ++|+++++.........     ...++.++++|+++.+++.+.+.+      .+|
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~~------~~d   69 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------KCD   69 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH------HCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHHh------CCC
Confidence            469999999999999999999999 57999988765433221     246899999999988776553321      589


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC------------------
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP------------------  153 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~------------------  153 (255)
                      ++||+|+.....     ...+.....+++|+.|+.++++.+...   +.+.++.||...+..                  
T Consensus        70 ~Vih~a~~~~~~-----~~~~~~~~~~~~nv~gt~~ll~~~~~~---~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~  141 (342)
T d2blla1          70 VVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV  141 (342)
T ss_dssp             EEEECBCCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCT
T ss_pred             cccccccccccc-----ccccCCccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence            999999975421     122334578999999999999987653   346677777654321                  


Q ss_pred             CCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC-----C---hhHHHHHHhh---------ccc
Q 025273          154 QSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS-----N---DGVRQTIEQN---------TLL  216 (255)
Q Consensus       154 ~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~-----~---~~~~~~~~~~---------~~~  216 (255)
                      ..+...|+.+|.+.+.+++.+++.+  ++.+..+.|..+..+.......     .   ..+.......         ...
T Consensus       142 ~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~  219 (342)
T d2blla1         142 NKPRWIYSVSKQLLDRVIWAYGEKE--GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK  219 (342)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCE
T ss_pred             CCCcchhhhcccchhhhhhhhhccc--CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCee
Confidence            1234679999999999999999887  6777788877776653322211     1   1111221111         122


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCc
Q 025273          217 NRLGTTRDMAAAAAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       217 ~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      +.+...+|+++++..++........|+++++.+|.
T Consensus       220 r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~  254 (342)
T d2blla1         220 RCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (342)
T ss_dssp             EECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             eeecccccccceeeeehhhccccCCCeEEEEeccc
Confidence            23678999999999988765444568999997653

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.79  E-value=4.6e-19  Score=148.00  Aligned_cols=221  Identities=17%  Similarity=0.065  Sum_probs=147.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|+||||||+|.||++++++|+++|+.|.++.++...-......+.. ...++.++.+|+++.+.+..++.       ..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            47899999999999999999999998755554331100000001111 24689999999999999888765       68


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC------------------
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ------------------  152 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------------------  152 (255)
                      |.++|.|+.....     ...++..+.+++|+.|+.+++..+...-   .+++++||...+.                  
T Consensus        75 ~~v~~~a~~~~~~-----~~~~~~~~~~~~N~~g~~nll~~~~~~~---~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~  146 (346)
T d1oc2a_          75 DAIVHYAAESHND-----NSLNDPSPFIHTNFIGTYTLLEAARKYD---IRFHHVSTDEVYGDLPLREDLPGHGEGPGEK  146 (346)
T ss_dssp             SEEEECCSCCCHH-----HHHHCCHHHHHHHTHHHHHHHHHHHHHT---CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSS
T ss_pred             hhhhhhhhccccc-----chhhCcccceeeehHhHHhhhhhhcccc---ccccccccceEecccCccccccccccCcccc
Confidence            8899999865421     1123345678999999999998776543   3778887765431                  


Q ss_pred             -----CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhh---------cccCC
Q 025273          153 -----PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQN---------TLLNR  218 (255)
Q Consensus       153 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~  218 (255)
                           +..+...|+.+|.+.+.+++.++++.  ++++..+.|+.+..|..................         ...+.
T Consensus       147 ~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~--~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~  224 (346)
T d1oc2a_         147 FTAETNYNPSSPYSSTKAASDLIVKAWVRSF--GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRD  224 (346)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEE
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHHHHc--CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCcccc
Confidence                 12245679999999999999998887  789999999988876432111111111111111         12223


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCccccEEEeCCCcc
Q 025273          219 LGTTRDMAAAAAFLASDDASYITGETLVVAGGMP  252 (255)
Q Consensus       219 ~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++..+|++.++..++....   .|..+++.+|..
T Consensus       225 ~i~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~  255 (346)
T d1oc2a_         225 WIHTNDHSTGVWAILTKGR---MGETYLIGADGE  255 (346)
T ss_dssp             CEEHHHHHHHHHHHHHHCC---TTCEEEECCSCE
T ss_pred             ccchhhHHHHHHHHHhhcc---cCcccccccccc
Confidence            5678999999888775543   355566665543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.78  E-value=7.2e-19  Score=145.36  Aligned_cols=223  Identities=15%  Similarity=0.046  Sum_probs=154.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEE------eCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVS------SRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~------~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++||||||+|.||++++++|+++|+.|..+      ++.................++.++..|+++.........     
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----   75 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR-----   75 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccc-----
Confidence            469999999999999999999999865443      322111011000011224689999999999987765433     


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----------CC
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----------QS  155 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~  155 (255)
                        .+|.++|+|+....     ....+..++.+++|+.++.++++++...-  ..++|++||...+.+           ..
T Consensus        76 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~--~~~~I~~Ss~~~yg~~~~~~~~E~~~~~  146 (322)
T d1r6da_          76 --GVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVYGSIDSGSWTESSPLE  146 (322)
T ss_dssp             --TCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGCCCSSSCBCTTSCCC
T ss_pred             --ccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHHHHcC--CceEEEeecceeecCCCCCCCCCCCCCC
Confidence              79999999986431     12334456678999999999999887642  358999999876532           34


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcc---------cCCCCCHHHHH
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTL---------LNRLGTTRDMA  226 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d~a  226 (255)
                      +...|+.+|.+.+.+++.+++++  ++.+..+.|+.+..|....-.--+.+........+         .+.+...+|++
T Consensus       147 p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a  224 (322)
T d1r6da_         147 PNSPYAASKAGSDLVARAYHRTY--GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHC  224 (322)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHH
Confidence            56789999999999999999887  78899999998887643211001122222222221         11255789999


Q ss_pred             HHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          227 AAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       227 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++..++....   .|+.+++.+|...+
T Consensus       225 ~ai~~~~~~~~---~~~~~ni~~~~~~s  249 (322)
T d1r6da_         225 RGIALVLAGGR---AGEIYHIGGGLELT  249 (322)
T ss_dssp             HHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred             HHHHHHHhCCC---CCCeeEEeecccch
Confidence            99999886654   47889998886543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=7.5e-20  Score=150.79  Aligned_cols=214  Identities=13%  Similarity=0.060  Sum_probs=145.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN-VDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |+||||||+|.||++++++|+++|++|++++|.... .+... .. ....++.....|+.+.     +       +.++|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~-~~-~~~~~~d~~~~~~~~~-----~-------~~~~d   67 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-HW-IGHENFELINHDVVEP-----L-------YIEVD   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG-GG-TTCTTEEEEECCTTSC-----C-------CCCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH-Hh-cCCCceEEEehHHHHH-----H-------HcCCC
Confidence            789999999999999999999999999999864322 11111 11 1133555555555432     1       23799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC----------------CCC
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ----------------PQS  155 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~----------------~~~  155 (255)
                      ++||+|+.... .    ...++..+.+++|+.++.++++++...   +.++|++||...+.                +..
T Consensus        68 ~VihlAa~~~~-~----~~~~~~~~~~~~Nv~g~~~ll~~~~~~---~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~  139 (312)
T d2b69a1          68 QIYHLASPASP-P----NYMYNPIKTLKTNTIGTLNMLGLAKRV---GARLLLASTSEVYGDPEVHPQSEDYWGHVNPIG  139 (312)
T ss_dssp             EEEECCSCCSH-H----HHTTCHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSS
T ss_pred             EEEECcccCCc-h----hHHhCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEEEChheecCCCCCCCCccccCCCCCCC
Confidence            99999996531 1    111234567899999999999987653   24899999976542                223


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC--hhHHHHHHhhcc---------cCCCCCHHH
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN--DGVRQTIEQNTL---------LNRLGTTRD  224 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~d  224 (255)
                      +...|+.+|.+.+.+++.+++.+  ++.+..++|+.+..|........  +.+........+         .+.+...+|
T Consensus       140 p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D  217 (312)
T d2b69a1         140 PRACYDEGKRVAETMCYAYMKQE--GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSD  217 (312)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHh--CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHH
Confidence            56789999999999999999988  78899999999988754322111  122222222211         123567899


Q ss_pred             HHHHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          225 MAAAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       225 ~a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++++..++...    .+..+++.+|...+
T Consensus       218 ~~~~~~~~~~~~----~~~~~n~~~~~~~~  243 (312)
T d2b69a1         218 LVNGLVALMNSN----VSSPVNLGNPEEHT  243 (312)
T ss_dssp             HHHHHHHHHTSS----CCSCEEESCCCEEE
T ss_pred             HHHHHHHHHhhc----cCCceEecCCcccc
Confidence            999998888554    24568888886643

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.76  E-value=4.4e-17  Score=137.60  Aligned_cols=173  Identities=20%  Similarity=0.129  Sum_probs=126.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEeC---------CchhHHHHHHHHHhc--------CCeEEEEEecCCCH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGL-EGASVVVSSR---------KQKNVDEAVVKLKAR--------GIEVIGVVCHVSNG   73 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~-~G~~V~~~~r---------~~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~   73 (255)
                      +++||||||+|.||++++++|++ .|++|+++|+         ..+..+.....+...        ...+.++++|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            56799999999999999999986 6899999874         112223333333221        23678899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-
Q 025273           74 QQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-  152 (255)
Q Consensus        74 ~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-  152 (255)
                      +.++++++..    .++|+++|+|+....     ....+.....+++|+.++.+++.++.....  .++++.|+...+. 
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~-----~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~--~~~~~~~s~~~~~~  150 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAV-----GESVRDPLKYYDNNVVGILRLLQAMLLHKC--DKIIFSSSAAIFGN  150 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEEEEGGGTBS
T ss_pred             HHhhhhhhcc----ceeehhhcccccccc-----cccccccccccccccccccccchhhhccCC--cccccccccccccc
Confidence            9988887643    468999999997541     112233556788999999999988876433  3677766654431 


Q ss_pred             -----------------CCCCChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcc
Q 025273          153 -----------------PQSSMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (255)
Q Consensus       153 -----------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~  197 (255)
                                       +..+...|+.+|.+.+.+++.+...+  ++.+..+.|+.+..+..
T Consensus       151 ~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--gl~~~~lR~~~vyG~~~  210 (383)
T d1gy8a_         151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY--GIKGICLRYFNACGAHE  210 (383)
T ss_dssp             CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECCCT
T ss_pred             cccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh--CCCEEEEecceeeccCc
Confidence                             23356789999999999999998887  68888888887766543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=9.7e-18  Score=137.88  Aligned_cols=153  Identities=13%  Similarity=0.147  Sum_probs=121.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      .|+||||||+|.||++++++|+++|+.|+++++..                    .+|+++.+.++++++.-     .+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~~-----~~d   56 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RID   56 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhhc-----CCC
Confidence            47899999999999999999999999988776542                    15999999998887643     799


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC----------------C
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ----------------S  155 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------------~  155 (255)
                      .++|+|+....    .........+.+++|+.++.++++++..+-  -.++|++||...+.+.                +
T Consensus        57 ~v~~~a~~~~~----~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~  130 (315)
T d1e6ua_          57 QVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQND--VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEP  130 (315)
T ss_dssp             EEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCG
T ss_pred             EEEEcchhccc----cccchhhHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEECCceEcCCCCCCCccCCccccCCCCC
Confidence            99999986541    112234456678899999999999887652  3489999998865321                1


Q ss_pred             CChhhHhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCcc
Q 025273          156 SMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (255)
Q Consensus       156 ~~~~y~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~  197 (255)
                      +..+|+.+|.+.|.+++.+.++.  ++++..+.|+.+..|..
T Consensus       131 ~~~~Y~~sK~~~E~~~~~~~~~~--gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         131 TNEPYAIAKIAGIKLCESYNRQY--GRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEESTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEeeccEECCCC
Confidence            23479999999999999999888  78999999998887654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=3.1e-17  Score=126.86  Aligned_cols=196  Identities=12%  Similarity=0.041  Sum_probs=131.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      .|+|+||||+|+||++++++|+++|++|+++.|+.++++..      ....+.++++|+++.++++++++       ..|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~-------~~d   69 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc-------CCC
Confidence            47899999999999999999999999999999998764321      13467889999999999887765       689


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCC----ChhhHhhHHHH
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSS----MAMYGVTKTAL  167 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~----~~~y~~sK~a~  167 (255)
                      ++||++|......+            .+++..+..++++++...  .-.++|++||.........    ...|...|...
T Consensus        70 ~vi~~~g~~~~~~~------------~~~~~~~~~~l~~aa~~~--~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~  135 (205)
T d1hdoa_          70 AVIVLLGTRNDLSP------------TTVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRM  135 (205)
T ss_dssp             EEEECCCCTTCCSC------------CCHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHH
T ss_pred             EEEEEeccCCchhh------------hhhhHHHHHHHHHHHHhc--CCCeEEEEeeeeccCCCccccccccccchHHHHH
Confidence            99999987532111            123444555666655442  2348999998765433222    23466666666


Q ss_pred             HHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccccEEEe
Q 025273          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITGETLVV  247 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +.+.+    +  .+++...|.||.+.........   .   ..........+...+|+|+.++..+..+.  ..|+.+.+
T Consensus       136 e~~l~----~--~~~~~tiirp~~~~~~~~~~~~---~---~~~~~~~~~~~i~~~DvA~~~~~~l~~~~--~~g~~~~~  201 (205)
T d1hdoa_         136 HKVLR----E--SGLKYVAVMPPHIGDQPLTGAY---T---VTLDGRGPSRVISKHDLGHFMLRCLTTDE--YDGHSTYP  201 (205)
T ss_dssp             HHHHH----H--TCSEEEEECCSEEECCCCCSCC---E---EESSSCSSCSEEEHHHHHHHHHHTTSCST--TTTCEEEE
T ss_pred             HHHHH----h--cCCceEEEecceecCCCCcccE---E---EeeCCCCCCCcCCHHHHHHHHHHHhCCCC--CCCEEEec
Confidence            65443    2  2788889999987543211000   0   00011122345689999999999986654  45887766


Q ss_pred             C
Q 025273          248 A  248 (255)
Q Consensus       248 d  248 (255)
                      -
T Consensus       202 s  202 (205)
T d1hdoa_         202 S  202 (205)
T ss_dssp             E
T ss_pred             C
Confidence            4

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.73  E-value=3.6e-17  Score=136.56  Aligned_cols=175  Identities=20%  Similarity=0.094  Sum_probs=133.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ++||+||||||+|.||++++++|+++|+.|++++|+........+.. .....+.++++|+++.+.+.++++..     .
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~   79 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREF-----Q   79 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhhc-----h
Confidence            68999999999999999999999999999999999876544433332 22346889999999999999888766     8


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc------------CCCCCC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY------------QPQSSM  157 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~------------~~~~~~  157 (255)
                      +|+++|+|+....     ..+.+..+..+.+|+.++.++++++...- ....+++.|+....            .+..+.
T Consensus        80 ~~~v~~~aa~~~~-----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~  153 (356)
T d1rkxa_          80 PEIVFHMAAQPLV-----RLSYSEPVETYSTNVMGTVYLLEAIRHVG-GVKAVVNITSDKCYDNKEWIWGYRENEAMGGY  153 (356)
T ss_dssp             CSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHHC-CCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS
T ss_pred             hhhhhhhhccccc-----cccccCCccccccccccchhhhhhhhccc-cccccccccccccccccccccccccccccCCC
Confidence            9999999986531     12234467789999999999999887643 22355555544332            123356


Q ss_pred             hhhHhhHHHHHHHHHHHHHHhC------C-CeeEEEEeCCcccCCc
Q 025273          158 AMYGVTKTALLGLTKALAAEMA------P-DTRVNCVAPGFVPTHF  196 (255)
Q Consensus       158 ~~y~~sK~a~~~l~~~la~e~~------~-~v~v~~v~pg~v~t~~  196 (255)
                      ..|+.+|...+.+++.++.++.      . ++.+..+.|+.+..|.
T Consensus       154 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         154 DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             CccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence            7899999999999999888753      1 5678888888777653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.66  E-value=7.1e-16  Score=121.24  Aligned_cols=216  Identities=11%  Similarity=0.032  Sum_probs=138.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCe--EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGAS--VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++||||||+|+||++++++|+++|++  |+.+.|+++..+.       ....+.++.+|+++.+.+.++++       .+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~-------~~   69 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-------IGGEADVFIGDITDADSINPAFQ-------GI   69 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-------TTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-------ccCCcEEEEeeeccccccccccc-------cc
Confidence            68999999999999999999999976  5556677654332       23467788999999999887765       78


Q ss_pred             CEEEEcCCCCCCCCC--------ccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHh
Q 025273           91 DVVVSNAAANPSVDS--------ILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGV  162 (255)
Q Consensus        91 d~lv~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  162 (255)
                      |.+||+++.......        ........+.....+|+.+..++........  .+...+.|+.....+..+...+..
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~~~  147 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG--VKHIVVVGSMGGTNPDHPLNKLGN  147 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT--CSEEEEEEETTTTCTTCGGGGGGG
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc--ccccccccccccCCCCcccccccc
Confidence            999999986432111        1111122345566889999988877665543  347777777766655444443333


Q ss_pred             hH-HHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCcc
Q 025273          163 TK-TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYIT  241 (255)
Q Consensus       163 sK-~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~  241 (255)
                      ++ .........+..+.  ++++..++||.+..+..............  .......+...+|+|++++.++..+.  ..
T Consensus       148 ~~~~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~--~~~~~~~~i~~~Dva~a~~~~l~~~~--~~  221 (252)
T d2q46a1         148 GNILVWKRKAEQYLADS--GTPYTIIRAGGLLDKEGGVRELLVGKDDE--LLQTDTKTVPRADVAEVCIQALLFEE--AK  221 (252)
T ss_dssp             CCHHHHHHHHHHHHHHS--SSCEEEEEECEEECSCTTSSCEEEESTTG--GGGSSCCEEEHHHHHHHHHHHTTCGG--GT
T ss_pred             cchhhhhhhhhhhhhcc--cccceeecceEEECCCcchhhhhhccCcc--cccCCCCeEEHHHHHHHHHHHhCCcc--cc
Confidence            33 33333333333333  78889999998877643222110000000  01122345678999999998886543  46


Q ss_pred             ccEEEeCCC
Q 025273          242 GETLVVAGG  250 (255)
Q Consensus       242 G~~i~~dgG  250 (255)
                      |+++++.++
T Consensus       222 g~~~~i~~~  230 (252)
T d2q46a1         222 NKAFDLGSK  230 (252)
T ss_dssp             TEEEEEEEC
T ss_pred             CcEEEEeeC
Confidence            888988654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3e-16  Score=123.57  Aligned_cols=198  Identities=13%  Similarity=0.051  Sum_probs=132.0

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++|+||||||||.||++++++|.++|.  +|++++|++.....      .....+....+|+.+.+++.+.+      
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~~------   78 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASAF------   78 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGGG------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeecccccccccccc------
Confidence            35689999999999999999999999995  79999998654221      11235666778888776655443      


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHH
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  166 (255)
                       ...|.++|++|...        .........++|+.++.++.+.+...  +-.++|++|+......  ....|+.+|..
T Consensus        79 -~~~d~vi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~--~v~~fi~~Ss~~~~~~--~~~~Y~~~K~~  145 (232)
T d2bkaa1          79 -QGHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAKAG--GCKHFNLLSSKGADKS--SNFLYLQVKGE  145 (232)
T ss_dssp             -SSCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred             -cccccccccccccc--------cccchhhhhhhcccccceeeeccccc--CccccccCCccccccC--ccchhHHHHHH
Confidence             47999999998532        23345667789999999999887653  2348999999876543  35679999998


Q ss_pred             HHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhc----ccCCCCCHHHHHHHHHHhcCCCC
Q 025273          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT----LLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       167 ~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      .+...+    +++. -++.-+.||.+..+...... ...+........    ......+++|+|++++..+....
T Consensus       146 ~E~~l~----~~~~-~~~~IlRP~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         146 VEAKVE----ELKF-DRYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             HHHHHH----TTCC-SEEEEEECCEEECTTGGGSH-HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             hhhccc----cccc-cceEEecCceeecCCCcCcH-HHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence            886654    2321 14566899999876432110 111111111111    11123467999998877765543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.53  E-value=4.7e-14  Score=113.34  Aligned_cols=193  Identities=17%  Similarity=0.185  Sum_probs=130.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++||||||+|.||++++++|.++|++|+.++|+.                     +|+++.+++++++++.     ++|+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~-----~~d~   55 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK-----KPNV   55 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc-----CCCE
Confidence            4599999999999999999999999999999863                     4999999999888866     7999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc-----------CCCCCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY-----------QPQSSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-----------~~~~~~~~y~  161 (255)
                      +||+|+....     +......+..+..|+.....+.......   ...+++.||...+           .+..+...|+
T Consensus        56 vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~---~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~  127 (281)
T d1vl0a_          56 VINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV---GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYG  127 (281)
T ss_dssp             EEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHH
T ss_pred             EEeecccccc-----ccccccchhhcccccccccccccccccc---cccccccccceeeeccccccccccccccchhhhh
Confidence            9999987541     1122334566778887777776655443   3366666665432           1234567899


Q ss_pred             hhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChhHHHHHHhhc-------ccCCCCCHHHHHHHHHHhcC
Q 025273          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDGVRQTIEQNT-------LLNRLGTTRDMAAAAAFLAS  234 (255)
Q Consensus       162 ~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d~a~~~~~l~s  234 (255)
                      .+|...+.+++    +.  +.+...+.|+.+..+-....   ..+........       ....+...+|+++++..++.
T Consensus       128 ~~k~~~e~~~~----~~--~~~~~i~R~~~vyG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~  198 (281)
T d1vl0a_         128 KTKLEGENFVK----AL--NPKYYIVRTAWLYGDGNNFV---KTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVID  198 (281)
T ss_dssp             HHHHHHHHHHH----HH--CSSEEEEEECSEESSSSCHH---HHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHH----Hh--CCCccccceeEEeCCCcccc---cchhhhhccCCceeecCCceeccchhhhhhhhhhhhhh
Confidence            99988776664    33  44666789988876532211   11121121111       12245688999999999885


Q ss_pred             CCCCCccccEEEeCCCcc
Q 025273          235 DDASYITGETLVVAGGMP  252 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~  252 (255)
                      ...   +| .+++-++..
T Consensus       199 ~~~---~g-~~~~~~~~~  212 (281)
T d1vl0a_         199 EKN---YG-TFHCTCKGI  212 (281)
T ss_dssp             HTC---CE-EEECCCBSC
T ss_pred             hcc---cC-ceeEeCCCc
Confidence            543   34 456655543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.46  E-value=6.8e-14  Score=113.79  Aligned_cols=207  Identities=11%  Similarity=0.041  Sum_probs=118.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHH--HHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD--EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .++||||||+|.||++++++|+++|++|+++.|+.....  ............+.++++|+++.+.+.+.++       .
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence            356999999999999999999999999999999754321  1111111124568889999999998877665       6


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC-----CCCChhhHhhH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP-----QSSMAMYGVTK  164 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----~~~~~~y~~sK  164 (255)
                      .+.++++++....                ..|..+..+++.++...  ...++++.||......     ..+...|..+|
T Consensus        76 ~~~~~~~~~~~~~----------------~~~~~~~~~~l~~a~~~--~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~  137 (312)
T d1qyda_          76 VDVVISALAGGVL----------------SHHILEQLKLVEAIKEA--GNIKRFLPSEFGMDPDIMEHALQPGSITFIDK  137 (312)
T ss_dssp             CSEEEECCCCSSS----------------STTTTTHHHHHHHHHHS--CCCSEEECSCCSSCTTSCCCCCSSTTHHHHHH
T ss_pred             cchhhhhhhhccc----------------ccchhhhhHHHHHHHHh--cCCcEEEEeeccccCCCcccccchhhhhhHHH
Confidence            8899998875431                12333344444444432  2346677776544322     22333445555


Q ss_pred             HHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccC-------ChhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCC
Q 025273          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITS-------NDGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       165 ~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  237 (255)
                      ...+    .+..+.  ++.+..+.|+.+..+.......       ................++..+|++++++.++..+.
T Consensus       138 ~~~~----~~~~~~--~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~  211 (312)
T d1qyda_         138 RKVR----RAIEAA--SIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ  211 (312)
T ss_dssp             HHHH----HHHHHT--TCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG
T ss_pred             HHHH----Hhhccc--ccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCcc
Confidence            4444    333343  5566677777664432211110       00000001111122236688999999998885542


Q ss_pred             CCccccEEEeCCC
Q 025273          238 SYITGETLVVAGG  250 (255)
Q Consensus       238 ~~~~G~~i~~dgG  250 (255)
                       ..++..+++.++
T Consensus       212 -~~~~~~~~~~~~  223 (312)
T d1qyda_         212 -TLNKTMYIRPPM  223 (312)
T ss_dssp             -GSSSEEECCCGG
T ss_pred             -ccCceEEEeCCC
Confidence             223333444444

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.43  E-value=3.2e-13  Score=109.11  Aligned_cols=130  Identities=21%  Similarity=0.184  Sum_probs=95.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++||||||+|.||++++++|.++|..| .++++...                 +..|+++.+.+++++++.     ++|+
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D~   57 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPDV   57 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCCE
Confidence            469999999999999999999988654 44544322                 346999999999988876     7999


Q ss_pred             EEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------CCCCChhhH
Q 025273           93 VVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~  161 (255)
                      +||+||......  .   .+.-+..+++|+.++.++..++..   .+.+++++||...+.           +..+...|+
T Consensus        58 Vih~Aa~~~~~~--~---~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~  129 (298)
T d1n2sa_          58 IVNAAAHTAVDK--A---ESEPELAQLLNATSVEAIAKAANE---TGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYG  129 (298)
T ss_dssp             EEECCCCCCHHH--H---TTCHHHHHHHHTHHHHHHHHHHTT---TTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH
T ss_pred             EEEecccccccc--c---ccCccccccccccccccchhhhhc---cccccccccccccccCCCCCCCccccccCCCchHh
Confidence            999999754211  1   122356778999999999887754   345788888765431           233567899


Q ss_pred             hhHHHHHHHHHH
Q 025273          162 VTKTALLGLTKA  173 (255)
Q Consensus       162 ~sK~a~~~l~~~  173 (255)
                      .+|.+.+.+.+.
T Consensus       130 ~~k~~~e~~~~~  141 (298)
T d1n2sa_         130 KTKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hhhhhhhhhHHh
Confidence            999988876653

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.43  E-value=2.7e-13  Score=109.57  Aligned_cols=208  Identities=9%  Similarity=0.032  Sum_probs=120.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH--HHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA--VVKLKA-RGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .|+||||||+|.||++++++|+++|++|++++|+.......  ...+.. ....+.++.+|+.+.+.....++       
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence            47899999999999999999999999999999976542211  111111 13467788999999998777765       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHH
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  168 (255)
                      ..+.++|+++...                    ..+...+.+++...  ....+++.||............+...+....
T Consensus        76 ~~~~vi~~~~~~~--------------------~~~~~~~~~a~~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  133 (307)
T d1qyca_          76 NVDVVISTVGSLQ--------------------IESQVNIIKAIKEV--GTVKRFFPSEFGNDVDNVHAVEPAKSVFEVK  133 (307)
T ss_dssp             TCSEEEECCCGGG--------------------SGGGHHHHHHHHHH--CCCSEEECSCCSSCTTSCCCCTTHHHHHHHH
T ss_pred             hceeeeecccccc--------------------cchhhHHHHHHHHh--ccccceeeecccccccccccccccccccccc
Confidence            6899999887532                    11222333333332  2336667666544333333333344444333


Q ss_pred             HHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC------hhHHHHHHhhcccCCCCCHHHHHHHHHHhcCCCCCCccc
Q 025273          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN------DGVRQTIEQNTLLNRLGTTRDMAAAAAFLASDDASYITG  242 (255)
Q Consensus       169 ~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G  242 (255)
                      .....+..+.  ++....+.|+.+..+....+...      ...............+...+|+++++..++..... .++
T Consensus       134 ~~~~~~~~~~--~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~~~  210 (307)
T d1qyca_         134 AKVRRAIEAE--GIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT-LNK  210 (307)
T ss_dssp             HHHHHHHHHH--TCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG-TTE
T ss_pred             ccccchhhcc--CCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhh-cCc
Confidence            3333333444  56667788877765432221110      00000111112223366899999999988865432 233


Q ss_pred             cEEEeCCCc
Q 025273          243 ETLVVAGGM  251 (255)
Q Consensus       243 ~~i~~dgG~  251 (255)
                      ..+++.+|.
T Consensus       211 ~~~~~~~~~  219 (307)
T d1qyca_         211 TLYLRLPAN  219 (307)
T ss_dssp             EEECCCGGG
T ss_pred             eeEEeCCCC
Confidence            334444444

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.41  E-value=7.6e-14  Score=107.88  Aligned_cols=188  Identities=15%  Similarity=0.107  Sum_probs=117.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|++|||||||.||++++++|.++|+  +|+...|+...          ...++   ..+..+..++..      ...+.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~~---~~~~~d~~~~~~------~~~~~   62 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRL---DNPVGPLAELLP------QLDGS   62 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTE---ECCBSCHHHHGG------GCCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hcccc---cccccchhhhhh------ccccc
Confidence            48999999999999999999999997  56767766432          11233   334444433221      12357


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~  169 (255)
                      +|.+||++|.....       ...-+...++|+.++.++.+.+...  ...+++++||..+..  .....|..+|...|.
T Consensus        63 ~d~vi~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~~--~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~E~  131 (212)
T d2a35a1          63 IDTAFCCLGTTIKE-------AGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADA--KSSIFYNRVKGELEQ  131 (212)
T ss_dssp             CSEEEECCCCCHHH-------HSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCT--TCSSHHHHHHHHHHH
T ss_pred             hheeeeeeeeeccc-------cccccccccchhhhhhhcccccccc--ccccccccccccccc--ccccchhHHHHHHhh
Confidence            89999999864211       1112456789999999999877653  345899999877653  345779999988876


Q ss_pred             HHHHHHHHhCCCe-eEEEEeCCcccCCccccccCChhHHHHHHhhcccC--CCCCHHHHHHHHHHhcCCCC
Q 025273          170 LTKALAAEMAPDT-RVNCVAPGFVPTHFAEYITSNDGVRQTIEQNTLLN--RLGTTRDMAAAAAFLASDDA  237 (255)
Q Consensus       170 l~~~la~e~~~~v-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~a~~~~~l~s~~~  237 (255)
                      ..+    +.  +. ++.-+.|+.+..+....... ......... ...+  +....+|+|+++..++..+.
T Consensus       132 ~l~----~~--~~~~~~I~Rp~~v~G~~~~~~~~-~~~~~~~~~-~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         132 ALQ----EQ--GWPQLTIARPSLLFGPREEFRLA-EILAAPIAR-ILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHT----TS--CCSEEEEEECCSEESTTSCEEGG-GGTTCCCC-----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             hcc----cc--ccccceeeCCcceeCCcccccHH-HHHHHHHhh-ccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            554    22  32 56678899987654321100 000000000 0000  11467899999999887654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.36  E-value=2.9e-12  Score=103.68  Aligned_cols=213  Identities=15%  Similarity=0.164  Sum_probs=125.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH--HhCCCC
Q 025273           15 AIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE--KFGKID   91 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g~~d   91 (255)
                      ||||||+|.||++++++|+++|+ .|+++++-....+. .. +...      ..+|..+.+   +..+....  .+..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~~-~~~~------~~~~~~~~~---~~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN-LVDL------NIADYMDKE---DFLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-HH-HHTS------CCSEEEEHH---HHHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-hc-cccc------chhhhccch---HHHHHHhhhhcccchh
Confidence            89999999999999999999996 58888643322111 11 1111      112223233   23333332  235788


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC-----------CCCCChhh
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ-----------PQSSMAMY  160 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y  160 (255)
                      .++|.|+.....    ...   .+...+.|+.+..++.+.....-.   ++++.||.....           +..+...|
T Consensus        71 ~i~~~aa~~~~~----~~~---~~~~~~~~~~~~~~~l~~~~~~~i---~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y  140 (307)
T d1eq2a_          71 AIFHEGACSSTT----EWD---GKYMMDNNYQYSKELLHYCLEREI---PFLYASSAATYGGRTSDFIESREYEKPLNVY  140 (307)
T ss_dssp             EEEECCSCCCTT----CCC---HHHHHHHTHHHHHHHHHHHHHHTC---CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             hhhhhccccccc----ccc---cccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence            999998854321    122   344567788888888777665432   455555544331           13456789


Q ss_pred             HhhHHHHHHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCC----hhHHHHHH----------hhcccCCCCCHHHHH
Q 025273          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSN----DGVRQTIE----------QNTLLNRLGTTRDMA  226 (255)
Q Consensus       161 ~~sK~a~~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~----------~~~~~~~~~~~~d~a  226 (255)
                      +.+|.+.+.+++.+..+.  ++.+..+.|..+..|........    ..+.....          .......+...+|++
T Consensus       141 ~~~K~~~e~~~~~~~~~~--~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~  218 (307)
T d1eq2a_         141 GYSKFLFDEYVRQILPEA--NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA  218 (307)
T ss_dssp             HHHHHHHHHHHHHHGGGC--SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHH
T ss_pred             ccccchhhhhcccccccc--ccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHH
Confidence            999999999999887776  56777777776666533211110    01111111          111223455688999


Q ss_pred             HHHHHhcCCCCCCccccEEEeCCCcccC
Q 025273          227 AAAAFLASDDASYITGETLVVAGGMPSR  254 (255)
Q Consensus       227 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      .++..++....    ...+++.+|...+
T Consensus       219 ~~~~~~~~~~~----~~~~~~~~~~~~s  242 (307)
T d1eq2a_         219 DVNLWFLENGV----SGIFNLGTGRAES  242 (307)
T ss_dssp             HHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred             HHHHHHhhhcc----ccccccccccchh
Confidence            98887775442    3467888776654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.34  E-value=7.4e-12  Score=103.73  Aligned_cols=205  Identities=13%  Similarity=0.049  Sum_probs=121.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHH-HHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ-RKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g~   89 (255)
                      +.|+|+||||||.||++++++|+++|++|+++.|+.+....  +.+. ....+.++++|+++.++ ++.+       +..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~-~~~~v~~~~gD~~d~~~~~~~a-------~~~   71 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ-AIPNVTLFQGPLLNNVPLMDTL-------FEG   71 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH-TSTTEEEEESCCTTCHHHHHHH-------HTT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc-ccCCCEEEEeeCCCcHHHHHHH-------hcC
Confidence            46899999999999999999999999999999998776432  2222 23468889999998665 3333       346


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC--CCCChhhHhhHHHH
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP--QSSMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~--~~~~~~y~~sK~a~  167 (255)
                      .|.++++......                 .++....+++.++...  ...++++.||.....+  ......|..+|...
T Consensus        72 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~aa~~a--gv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~  132 (350)
T d1xgka_          72 AHLAFINTTSQAG-----------------DEIAIGKDLADAAKRA--GTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTV  132 (350)
T ss_dssp             CSEEEECCCSTTS-----------------CHHHHHHHHHHHHHHH--SCCSEEEEEECCCGGGTSSCCCCTTTHHHHHH
T ss_pred             CceEEeecccccc-----------------hhhhhhhHHHHHHHHh--CCCceEEEeeccccccCCcccchhhhhhHHHH
Confidence            7887776543210                 1223334455554432  2346777887654332  33345667788776


Q ss_pred             HHHHHHHHHHhCCCeeEEEEeCCcccCCccccccCChh---HHHH-HHhhccc-C----CCCC-HHHHHHHHHHhcCCCC
Q 025273          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAEYITSNDG---VRQT-IEQNTLL-N----RLGT-TRDMAAAAAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v~pg~v~t~~~~~~~~~~~---~~~~-~~~~~~~-~----~~~~-~~d~a~~~~~l~s~~~  237 (255)
                      +.+.+    +.  ++....+.|+++..+..........   .... ..-..+. +    .+.. .+|++..+..++.+..
T Consensus       133 ~~~~~----~~--~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~  206 (350)
T d1xgka_         133 ENYVR----QL--GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGP  206 (350)
T ss_dssp             HHHHH----TS--SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCH
T ss_pred             HHHHH----hh--ccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCCh
Confidence            65543    22  4566677787665433211111000   0000 0000000 0    0123 4789998888875544


Q ss_pred             CCccccEEEeCCC
Q 025273          238 SYITGETLVVAGG  250 (255)
Q Consensus       238 ~~~~G~~i~~dgG  250 (255)
                      ...+|+.+.+.|.
T Consensus       207 ~~~~G~~~~~~g~  219 (350)
T d1xgka_         207 QKWNGHRIALTFE  219 (350)
T ss_dssp             HHHTTCEEEECSE
T ss_pred             hhcCCeEEEEeCC
Confidence            4467888888753

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.92  E-value=9.9e-15  Score=111.51  Aligned_cols=47  Identities=23%  Similarity=0.374  Sum_probs=42.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR   59 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   59 (255)
                      +++.|+||+|++|+++|+.|+++|++|++.+|++++++.+.+++...
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            35788899999999999999999999999999999999988888654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.46  E-value=2.4e-07  Score=68.92  Aligned_cols=105  Identities=13%  Similarity=0.226  Sum_probs=72.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +|.+|||+||+|++|...++.....|++|+.+++++++.+.++    ..+....+   |-.+++..+...+..  ..+.+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~~Ga~~vi---~~~~~~~~~~~~~~~--~~~Gv   99 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----QIGFDAAF---NYKTVNSLEEALKKA--SPDGY   99 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEEE---ETTSCSCHHHHHHHH--CTTCE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----hhhhhhhc---ccccccHHHHHHHHh--hcCCC
Confidence            4899999999999999999999999999999999977654433    23444333   333333333332221  12369


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY  151 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~  151 (255)
                      |+++++.|. .                          ..+..++.++++|+++.++....+
T Consensus       100 d~v~D~vG~-~--------------------------~~~~~~~~l~~~G~~v~~G~~~~~  133 (182)
T d1v3va2         100 DCYFDNVGG-E--------------------------FLNTVLSQMKDFGKIAICGAISVY  133 (182)
T ss_dssp             EEEEESSCH-H--------------------------HHHHHGGGEEEEEEEEECCCGGGT
T ss_pred             ceeEEecCc-h--------------------------hhhhhhhhccCCCeEEeecceeec
Confidence            999999873 1                          234567888889999998866544

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.45  E-value=6.7e-07  Score=65.52  Aligned_cols=105  Identities=17%  Similarity=0.221  Sum_probs=72.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG-K   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-~   89 (255)
                      .|.+|+|+| +|++|...++.+...|++|+++++++++++..++    .+....+ ..|-. .++.....+.+.+..| .
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~ga~~~~-~~~~~-~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGADVTL-VVDPA-KEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSEEE-ECCTT-TSCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----cCCcEEE-ecccc-ccccchhhhhhhcccccC
Confidence            478999997 6899999999998999999999999887664432    2333332 22322 2334455566666654 6


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      +|++|.++|...                          ..+.++..++++|+++.++-.
T Consensus        99 ~D~vid~~g~~~--------------------------~~~~a~~~~~~~G~iv~~G~~  131 (170)
T d1e3ja2          99 PNVTIDCSGNEK--------------------------CITIGINITRTGGTLMLVGMG  131 (170)
T ss_dssp             CSEEEECSCCHH--------------------------HHHHHHHHSCTTCEEEECSCC
T ss_pred             CceeeecCCChH--------------------------HHHHHHHHHhcCCceEEEecC
Confidence            999999988411                          233345677889999998843

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.43  E-value=9.5e-07  Score=65.94  Aligned_cols=111  Identities=17%  Similarity=0.170  Sum_probs=73.0

Q ss_pred             CCEEEE-EcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH-hCC
Q 025273           12 GKVAIV-TASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK-FGK   89 (255)
Q Consensus        12 ~k~vlI-tGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~   89 (255)
                      |.+++| +||+|++|.+.++.....|++|+++.|+.+..+...+.+.+.+....+.. |-.+..+..+.+.++... .+.
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~-~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITE-DQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEH-HHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEec-cccchhHHHHHHHHHHhhccCC
Confidence            555555 69999999999998888999999999888777766666666565544322 111112233334444333 357


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      +|+++++.|..                           .....++.++++|++|.++...+
T Consensus       108 vdvv~D~vg~~---------------------------~~~~~~~~l~~~G~~v~~G~~~~  141 (189)
T d1gu7a2         108 AKLALNCVGGK---------------------------SSTGIARKLNNNGLMLTYGGMSF  141 (189)
T ss_dssp             EEEEEESSCHH---------------------------HHHHHHHTSCTTCEEEECCCCSS
T ss_pred             ceEEEECCCcc---------------------------hhhhhhhhhcCCcEEEEECCccC
Confidence            99999987621                           11233567788999999876544

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.40  E-value=2.1e-06  Score=63.64  Aligned_cols=84  Identities=14%  Similarity=0.276  Sum_probs=64.7

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHH---HHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVK---LKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      .++++|+|+|.|+ ||.|++++..|++.|.+ ++++.|+.+..+++...   +.... ......+|+.+.+++.+...  
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAEALA--   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHH--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhhhhc--
Confidence            4688999999998 69999999999999985 99999998877665443   33322 23355789998888766654  


Q ss_pred             HHHhCCCCEEEEcCCCC
Q 025273           84 IEKFGKIDVVVSNAAAN  100 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~  100 (255)
                           ..|++||+....
T Consensus        90 -----~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 -----SADILTNGTKVG  101 (182)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----ccceeccccCCc
Confidence                 789999998654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.38  E-value=2.9e-07  Score=67.98  Aligned_cols=106  Identities=17%  Similarity=0.127  Sum_probs=71.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      .+|.+|||+||+||+|...++.....|++|+.+++++++.+..++    .+....+   |-.+  ...+.   +.... +
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~----lGa~~vi---~~~~--~~~~~---~~~~~~~   97 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAKEVL---ARED--VMAER---IRPLDKQ   97 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCSEEE---ECC--------------CCSC
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh----cccceee---ecch--hHHHH---HHHhhcc
Confidence            347899999999999999999888999999999999887665432    2444332   2221  11111   11212 4


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQ  154 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~  154 (255)
                      ++|+++.+.|...                           ....+..++++|+++.++...+..+.
T Consensus        98 gvD~vid~vgg~~---------------------------~~~~l~~l~~~Griv~~G~~~g~~~~  136 (176)
T d1xa0a2          98 RWAAAVDPVGGRT---------------------------LATVLSRMRYGGAVAVSGLTGGAEVP  136 (176)
T ss_dssp             CEEEEEECSTTTT---------------------------HHHHHHTEEEEEEEEECSCCSSSCCC
T ss_pred             CcCEEEEcCCchh---------------------------HHHHHHHhCCCceEEEeecccCcccC
Confidence            7999999988422                           12245778889999999988766543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=1.3e-06  Score=64.22  Aligned_cols=99  Identities=14%  Similarity=0.245  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      +|.+|||+||+|++|...++.....|++|+++++++++.+.++    +.+....   .|.++++-.+    ++.+..  .
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~----~~Ga~~v---i~~~~~~~~~----~i~~~t~~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL----QNGAHEV---FNHREVNYID----KIKKYVGEK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEE---EETTSTTHHH----HHHHHHCTT
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc----ccCcccc---cccccccHHH----HhhhhhccC
Confidence            5889999999999999999999899999999998876544332    2344332   3666554333    333333  2


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .+|+++.+.|. .                          ..+..++.++++|+++.++.
T Consensus        97 g~d~v~d~~g~-~--------------------------~~~~~~~~l~~~G~iv~~G~  128 (174)
T d1yb5a2          97 GIDIIIEMLAN-V--------------------------NLSKDLSLLSHGGRVIVVGS  128 (174)
T ss_dssp             CEEEEEESCHH-H--------------------------HHHHHHHHEEEEEEEEECCC
T ss_pred             CceEEeecccH-H--------------------------HHHHHHhccCCCCEEEEEec
Confidence            58999988762 0                          12334567788899999864

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.23  E-value=8.3e-07  Score=65.77  Aligned_cols=102  Identities=16%  Similarity=0.245  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      +|.+|||+||+|++|...++.+...|++|++++++.++.+.+    .+.+....   .|-.+++-    .+++.+..  .
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l----~~~Ga~~v---i~~~~~~~----~~~v~~~t~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEYV---GDSRSVDF----ADEILELTDGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSEE---EETTCSTH----HHHHHHHTTTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc----cccccccc---ccCCccCH----HHHHHHHhCCC
Confidence            478999999999999999999988999999999887654433    23344432   24444332    23333433  2


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      .+|+++.+.|. .                          ..+.++..++++|++|.++...+
T Consensus        94 g~d~v~d~~g~-~--------------------------~~~~~~~~l~~~G~~v~~G~~~~  128 (183)
T d1pqwa_          94 GVDVVLNSLAG-E--------------------------AIQRGVQILAPGGRFIELGKKDV  128 (183)
T ss_dssp             CEEEEEECCCT-H--------------------------HHHHHHHTEEEEEEEEECSCGGG
T ss_pred             CEEEEEecccc-h--------------------------HHHHHHHHhcCCCEEEEEccCCC
Confidence            69999999872 1                          11223466778899999875443

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=98.21  E-value=3.2e-06  Score=62.50  Aligned_cols=102  Identities=14%  Similarity=0.191  Sum_probs=69.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      .|.+|||+|+ |++|...++.+...|+ +|+++++++++++.. +++   +....+   |.++. +..+..+.+.+.. +
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~vi---~~~~~-~~~~~~~~i~~~~~~   98 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI---GADLTL---NRRET-SVEERRKAIMDITHG   98 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT---TCSEEE---ETTTS-CHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc---cceEEE---ecccc-chHHHHHHHHHhhCC
Confidence            5899999997 8999999999999998 699999998876643 222   433332   44332 2222334444433 2


Q ss_pred             -CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           89 -KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       .+|++|.+.|...                          ..+..+..++++|+++.++-
T Consensus        99 ~g~Dvvid~vG~~~--------------------------~~~~a~~~l~~~G~iv~~G~  132 (182)
T d1vj0a2          99 RGADFILEATGDSR--------------------------ALLEGSELLRRGGFYSVAGV  132 (182)
T ss_dssp             SCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCC
T ss_pred             CCceEEeecCCchh--------------------------HHHHHHHHhcCCCEEEEEee
Confidence             5899999988522                          22344567788899998874

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.21  E-value=2.9e-06  Score=62.22  Aligned_cols=74  Identities=16%  Similarity=0.108  Sum_probs=55.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      .|+|+|.|| |.+|+.+++.|+++|++|++++|+.+.++.+.+.    .........+..........+.       ..|
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~----~~~~~~~~~~~~~~~~~~~~i~-------~~~   69 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----VQHSTPISLDVNDDAALDAEVA-------KHD   69 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT----CTTEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc----ccccccccccccchhhhHhhhh-------ccc
Confidence            689999987 9999999999999999999999999877765543    3345555566666666555543       567


Q ss_pred             EEEEcC
Q 025273           92 VVVSNA   97 (255)
Q Consensus        92 ~lv~~a   97 (255)
                      .++...
T Consensus        70 ~~i~~~   75 (182)
T d1e5qa1          70 LVISLI   75 (182)
T ss_dssp             EEEECS
T ss_pred             eeEeec
Confidence            777553

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.17  E-value=2.4e-06  Score=62.93  Aligned_cols=103  Identities=16%  Similarity=0.185  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   88 (255)
                      .|++|||+||+|++|..+++.....|++|+++++++++.+.++ ++   +....   .|-++++-.+    ++++..  .
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l---Ga~~v---i~~~~~d~~~----~v~~~t~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA---GAWQV---INYREEDLVE----RLKEITGGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHH----HHHHHTTTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc---CCeEE---EECCCCCHHH----HHHHHhCCC
Confidence            4789999999999999999999999999999999988766543 23   33322   3666543333    333322  3


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY  151 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~  151 (255)
                      .+|+++.+.|...            +               +...+.++++|+++.++.....
T Consensus        97 g~d~v~d~~g~~~------------~---------------~~~~~~l~~~G~~v~~g~~~~~  132 (179)
T d1qora2          97 KVRVVYDSVGRDT------------W---------------ERSLDCLQRRGLMVSFGNSSGA  132 (179)
T ss_dssp             CEEEEEECSCGGG------------H---------------HHHHHTEEEEEEEEECCCTTCC
T ss_pred             CeEEEEeCccHHH------------H---------------HHHHHHHhcCCeeeecccccCC
Confidence            6899999887311            1               2235567778899887765543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.13  E-value=1.5e-05  Score=57.44  Aligned_cols=74  Identities=26%  Similarity=0.274  Sum_probs=57.0

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      +++++++||.|+ |++|+.+++.|...|++ +.++.|+.++++.+++++.   .++       ...+++.+.+.      
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~~~-------~~~~~~~~~l~------   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GEA-------VRFDELVDHLA------   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CEE-------CCGGGHHHHHH------
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---ccc-------ccchhHHHHhc------
Confidence            688999999998 99999999999999985 9999999888888877763   221       12233333333      


Q ss_pred             CCCCEEEEcCCCC
Q 025273           88 GKIDVVVSNAAAN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                       ..|++|++.+..
T Consensus        84 -~~Divi~atss~   95 (159)
T d1gpja2          84 -RSDVVVSATAAP   95 (159)
T ss_dssp             -TCSEEEECCSSS
T ss_pred             -cCCEEEEecCCC
Confidence             789999998753

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=1.7e-05  Score=57.80  Aligned_cols=103  Identities=18%  Similarity=0.252  Sum_probs=70.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG-   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   88 (255)
                      .|.+|+|.|+ |++|...++.+...|+ +|+++++++.+++..+ ++   +..... ..+-.+   ..+..+.+....| 
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~---Ga~~~~-~~~~~~---~~~~~~~~~~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI---GADLVL-QISKES---PQEIARKVEGQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---TCSEEE-ECSSCC---HHHHHHHHHHHHTS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh---CCcccc-cccccc---cccccccccccCCC
Confidence            4789999987 9999999999999999 6999999988776433 32   333332 222223   3333444444454 


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      .+|++|.+.|...                          ..+..+..++++|++++++-.
T Consensus        97 g~Dvvid~~G~~~--------------------------~~~~a~~~~~~gG~iv~~G~~  130 (171)
T d1pl8a2          97 KPEVTIECTGAEA--------------------------SIQAGIYATRSGGTLVLVGLG  130 (171)
T ss_dssp             CCSEEEECSCCHH--------------------------HHHHHHHHSCTTCEEEECSCC
T ss_pred             CceEEEeccCCch--------------------------hHHHHHHHhcCCCEEEEEecC
Confidence            7999999988411                          234456677889999998743

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.11  E-value=2.6e-06  Score=63.37  Aligned_cols=104  Identities=17%  Similarity=0.262  Sum_probs=64.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEE-EEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVV-VSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +++|||+||+||+|...++.....|+.++ .++++++....+.+++   +....   .|.++++- .+.++++..  ..+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~v---i~~~~~~~-~~~~~~~~~--~Gv  101 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAA---VNYKTGNV-AEQLREACP--GGV  101 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEE---EETTSSCH-HHHHHHHCT--TCE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEE---eeccchhH-HHHHHHHhc--cCc
Confidence            48899999999999999998888998744 4566655544444433   33333   35554433 333333321  369


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCcc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGY  151 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~  151 (255)
                      |+++.+.|..                           .++..++.++++|+++.+++..++
T Consensus       102 Dvv~D~vGg~---------------------------~~~~~~~~l~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         102 DVYFDNVGGD---------------------------ISNTVISQMNENSHIILCGQISQY  135 (187)
T ss_dssp             EEEEESSCHH---------------------------HHHHHHTTEEEEEEEEEC------
T ss_pred             eEEEecCCch---------------------------hHHHHhhhccccccEEEecccccc
Confidence            9999998720                           123356778899999998876654

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.10  E-value=2.9e-06  Score=53.22  Aligned_cols=44  Identities=23%  Similarity=0.194  Sum_probs=38.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV   53 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   53 (255)
                      .++.++||+||+||+|...++.+...|++|+.+.+++++.+.++
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            35789999999999999999988889999999999988766543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.07  E-value=4.1e-06  Score=61.30  Aligned_cols=99  Identities=16%  Similarity=0.304  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .+|++|||+||+|++|...++.+...|++|+.+++++++.+..++    .+....+   |..+  ..    +++ .....
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~----lGa~~~i---~~~~--~~----~~~-~~~~g   91 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGAEEAA---TYAE--VP----ERA-KAWGG   91 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTCSEEE---EGGG--HH----HHH-HHTTS
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc----cccceee---ehhh--hh----hhh-hcccc
Confidence            368999999999999999999988899999999998877654432    2433322   3322  11    122 22347


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAG  150 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~  150 (255)
                      +|+++.+.|- .            +               ...++.++++|+++.++...+
T Consensus        92 ~D~v~d~~G~-~------------~---------------~~~~~~l~~~G~~v~~G~~~g  124 (171)
T d1iz0a2          92 LDLVLEVRGK-E------------V---------------EESLGLLAHGGRLVYIGAAEG  124 (171)
T ss_dssp             EEEEEECSCT-T------------H---------------HHHHTTEEEEEEEEEC-----
T ss_pred             ccccccccch-h------------H---------------HHHHHHHhcCCcEEEEeCCCC
Confidence            9999997661 0            1               123567788899999875443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.05  E-value=5.7e-06  Score=57.79  Aligned_cols=72  Identities=11%  Similarity=0.211  Sum_probs=56.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      ++|+|.|+ |.+|+.+++.|.++|+.|++++++++..+.+.+++     ...++..|.++++.++++-      ....|.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~------i~~a~~   68 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAG------IEDADM   68 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTT------TTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcC------hhhhhh
Confidence            47899998 99999999999999999999999988777654432     3456789999999877651      125777


Q ss_pred             EEEc
Q 025273           93 VVSN   96 (255)
Q Consensus        93 lv~~   96 (255)
                      ++..
T Consensus        69 vv~~   72 (132)
T d1lssa_          69 YIAV   72 (132)
T ss_dssp             EEEC
T ss_pred             hccc
Confidence            7764

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.99  E-value=4e-06  Score=61.20  Aligned_cols=101  Identities=14%  Similarity=0.160  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (255)
                      .+.+|+|.|++|++|..+++.+...|. +|+++++++++.+..++ +   +....   .|-++.+-.++.    .+..  
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~---Ga~~~---i~~~~~~~~~~~----~~~~~~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A---GADYV---INASMQDPLAEI----RRITES   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHH----HHHTTT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c---CCcee---eccCCcCHHHHH----HHHhhc
Confidence            478999999999999999999999995 79999999876554432 2   33332   244444333333    3322  


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      +.+|+++.++|...                          ..+..+..++++|+++.++-.
T Consensus        96 ~~~d~vid~~g~~~--------------------------~~~~a~~~l~~~G~iv~~G~~  130 (170)
T d1jvba2          96 KGVDAVIDLNNSEK--------------------------TLSVYPKALAKQGKYVMVGLF  130 (170)
T ss_dssp             SCEEEEEESCCCHH--------------------------HHTTGGGGEEEEEEEEECCSS
T ss_pred             ccchhhhcccccch--------------------------HHHhhhhhcccCCEEEEeccc
Confidence            35899999988421                          112235677888999988643

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.93  E-value=2.6e-05  Score=59.36  Aligned_cols=80  Identities=19%  Similarity=0.166  Sum_probs=56.9

Q ss_pred             ccCCCCEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCC
Q 025273            8 KRFQGKVAIVTAS----------------TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS   71 (255)
Q Consensus         8 ~~l~~k~vlItGa----------------~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~   71 (255)
                      .+|+||+||||+|                ||-.|.++|+++.++|+.|.++.-....         ..+..+..+  .+.
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~~--~~~   70 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKRV--DVM   70 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEEE--ECC
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Ccccccccc--eeh
Confidence            5799999999987                5788999999999999999988655321         112233332  344


Q ss_pred             CHHHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 025273           72 NGQQRKNLINQTIEKFGKIDVVVSNAAANP  101 (255)
Q Consensus        72 ~~~~v~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      ..++.   .+.+.+.+...|++|++|++.+
T Consensus        71 t~~~m---~~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          71 TALEM---EAAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             SHHHH---HHHHHHHGGGCSEEEECCBCCS
T ss_pred             hhHHH---HHHHHhhhccceeEeeeechhh
Confidence            44444   4444455567899999999865

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.89  E-value=1.1e-05  Score=59.19  Aligned_cols=99  Identities=19%  Similarity=0.239  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh--
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF--   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   87 (255)
                      +|.+|+|.|+ |++|...++.+...|+ +|+++++++++++..+ ++   +....   +|..+++-.    +++.+..  
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l---Ga~~~---i~~~~~~~~----~~v~~~t~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY---GATDI---LNYKNGHIE----DQVMKLTNG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH---TCSEE---ECGGGSCHH----HHHHHHTTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh---Ccccc---ccccchhHH----HHHHHHhhc
Confidence            4788999986 8999999999998998 5999999987755443 33   33222   344433222    2333332  


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      ..+|++|.++|...                          ..+..+..++++|+++.++-
T Consensus        95 ~G~D~vid~~g~~~--------------------------~~~~a~~~~~~~G~iv~~G~  128 (174)
T d1jqba2          95 KGVDRVIMAGGGSE--------------------------TLSQAVKMVKPGGIISNINY  128 (174)
T ss_dssp             SCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCC
T ss_pred             cCcceEEEccCCHH--------------------------HHHHHHHHHhcCCEEEEEee
Confidence            25999999998532                          12334456678889998874

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.89  E-value=2.4e-05  Score=56.84  Aligned_cols=98  Identities=19%  Similarity=0.255  Sum_probs=67.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      -.|.+|+|.|+ |++|...++.+...|++++++++++++.+. .+++   +....   .|-.+.+....       ..+.
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l---Gad~~---i~~~~~~~~~~-------~~~~   93 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL---GADEV---VNSRNADEMAA-------HLKS   93 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH---TCSEE---EETTCHHHHHT-------TTTC
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc---CCcEE---EECchhhHHHH-------hcCC
Confidence            35889999986 899999998888899999999999887653 3333   33332   35555543322       1247


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      +|.++.+.|....           +               +..+..++++|+++.++..
T Consensus        94 ~D~vid~~g~~~~-----------~---------------~~~~~~l~~~G~iv~~G~~  126 (168)
T d1uufa2          94 FDFILNTVAAPHN-----------L---------------DDFTTLLKRDGTMTLVGAP  126 (168)
T ss_dssp             EEEEEECCSSCCC-----------H---------------HHHHTTEEEEEEEEECCCC
T ss_pred             Cceeeeeeecchh-----------H---------------HHHHHHHhcCCEEEEeccC
Confidence            9999999885321           1               1234567788899988743

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.84  E-value=1.7e-05  Score=57.79  Aligned_cols=77  Identities=12%  Similarity=0.152  Sum_probs=57.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+++||+|||.|+ ||.+++++..|.+.|.+|+++.|+.++.+.+.+.+.... .+..+..|  +.            ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~~~~--~~------------~~   77 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQALSMD--EL------------EG   77 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSG--GG------------TT
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-cccccccc--cc------------cc
Confidence            3578999999997 888999999999999999999999999888887765443 23322211  11            11


Q ss_pred             CCCCEEEEcCCCC
Q 025273           88 GKIDVVVSNAAAN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      ...|++||+....
T Consensus        78 ~~~dliIN~Tp~G   90 (170)
T d1nyta1          78 HEFDLIINATSSG   90 (170)
T ss_dssp             CCCSEEEECCSCG
T ss_pred             cccceeecccccC
Confidence            3689999997553

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.74  E-value=9.5e-05  Score=53.86  Aligned_cols=100  Identities=11%  Similarity=0.173  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   88 (255)
                      .|.+|+|.|+ |++|...++.+...|+. |+++++++++++..+ ++   +....   .|..+++..    +++++.. +
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~---Ga~~~---i~~~~~~~~----~~i~~~t~g   95 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL---GATHV---INSKTQDPV----AAIKEITDG   95 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH---TCSEE---EETTTSCHH----HHHHHHTTS
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc---CCeEE---EeCCCcCHH----HHHHHHcCC
Confidence            5789999997 89999999999889987 556677776655433 33   32222   355443322    2333322 4


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      .+|++|.+.|...                          ..+..+..++++|+++.++..
T Consensus        96 g~D~vid~~G~~~--------------------------~~~~~~~~~~~~G~i~~~G~~  129 (174)
T d1f8fa2          96 GVNFALESTGSPE--------------------------ILKQGVDALGILGKIAVVGAP  129 (174)
T ss_dssp             CEEEEEECSCCHH--------------------------HHHHHHHTEEEEEEEEECCCC
T ss_pred             CCcEEEEcCCcHH--------------------------HHHHHHhcccCceEEEEEeec
Confidence            7999999988421                          222345677888999988753

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.73  E-value=9.9e-05  Score=53.66  Aligned_cols=77  Identities=14%  Similarity=0.198  Sum_probs=58.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++++|+|+|.|+ ||.+++++..|.+.+.+|+++.|+.++++.+.+.+.... .+..+..|..              ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~~   77 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------PL   77 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------CC
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------cc
Confidence            4578999999976 777999999999888889999999999998888876432 4444443321              12


Q ss_pred             CCCCEEEEcCCCC
Q 025273           88 GKIDVVVSNAAAN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      ...|++||+....
T Consensus        78 ~~~diiIN~tp~g   90 (171)
T d1p77a1          78 QTYDLVINATSAG   90 (171)
T ss_dssp             SCCSEEEECCCC-
T ss_pred             cccceeeeccccc
Confidence            3789999998754

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.69  E-value=7.1e-05  Score=54.03  Aligned_cols=99  Identities=16%  Similarity=0.236  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|.+|+|.|+ |++|...++.+...|++|+++++++++++..+ +   .+....   .|.++.+..+.+    .+..+..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~---~Ga~~~---i~~~~~~~~~~~----~~~~~g~   94 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-K---LGASLT---VNARQEDPVEAI----QRDIGGA   94 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-H---TTCSEE---EETTTSCHHHHH----HHHHSSE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-c---cCcccc---ccccchhHHHHH----HHhhcCC
Confidence            4789999886 99999999988889999999999987765433 2   243333   255554444333    2333455


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      |..|-+++..           +               ..+..++.++++|+++.++-
T Consensus        95 ~~~i~~~~~~-----------~---------------~~~~~~~~l~~~G~iv~~G~  125 (166)
T d1llua2          95 HGVLVTAVSN-----------S---------------AFGQAIGMARRGGTIALVGL  125 (166)
T ss_dssp             EEEEECCSCH-----------H---------------HHHHHHTTEEEEEEEEECCC
T ss_pred             cccccccccc-----------h---------------HHHHHHHHhcCCcEEEEEEe
Confidence            6555554421           1               12234677788899999863

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.64  E-value=0.00047  Score=48.68  Aligned_cols=113  Identities=14%  Similarity=0.073  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      .+++|.|.|+ |.+|.+++..|+.+|.  +++++|++++.++....++...    .....+...|.   +.         
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~---------   71 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD---------   71 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG---------
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH---------
Confidence            4678999997 9999999999999885  5999999988877666666432    22233323222   22         


Q ss_pred             HHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           85 EKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                        +..-|++|.++|.....   .+...+.    +..|..=.-.+.+.+.++ .+.+.++++|
T Consensus        72 --l~daDvvvitag~~~~~---~~~R~dl----~~~N~~i~~~i~~~i~~~-~p~a~~ivvt  123 (148)
T d1ldna1          72 --CRDADLVVICAGANQKP---GETRLDL----VDKNIAIFRSIVESVMAS-GFQGLFLVAT  123 (148)
T ss_dssp             --TTTCSEEEECCSCCCCT---TTCSGGG----HHHHHHHHHHHHHHHHHH-TCCSEEEECS
T ss_pred             --hccceeEEEeccccccc---CcchhHH----HHHHHHHHHHHHHHHHhh-CCCceEEEec
Confidence              23689999999975421   1222222    334433333333333333 2456777765

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.59  E-value=3.5e-05  Score=55.92  Aligned_cols=102  Identities=21%  Similarity=0.222  Sum_probs=68.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH-Hh-C
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE-KF-G   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~-g   88 (255)
                      ++.+|||+||+||+|...++.....|++|+.+.+++++.+.+++ +   +....+   |   .+   +...+... .. +
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-l---Gad~vi---~---~~---~~~~~~~~~~~~~   89 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-L---GASEVI---S---RE---DVYDGTLKALSKQ   89 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-H---TCSEEE---E---HH---HHCSSCCCSSCCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-h---cccceE---e---cc---chhchhhhcccCC
Confidence            46689999999999999998888889999999999887665433 2   333322   1   11   11111111 11 3


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ  152 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~  152 (255)
                      .+|+++.+.|..                           .+...++.++++|+++.++...+..
T Consensus        90 gvd~vid~vgg~---------------------------~~~~~~~~l~~~G~iv~~G~~~g~~  126 (167)
T d1tt7a2          90 QWQGAVDPVGGK---------------------------QLASLLSKIQYGGSVAVSGLTGGGE  126 (167)
T ss_dssp             CEEEEEESCCTH---------------------------HHHHHHTTEEEEEEEEECCCSSCSC
T ss_pred             CceEEEecCcHH---------------------------HHHHHHHHhccCceEEEeeccCCCc
Confidence            689999987731                           2233567788899999998776643

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.57  E-value=0.00016  Score=52.71  Aligned_cols=102  Identities=17%  Similarity=0.202  Sum_probs=65.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   87 (255)
                      -.|.+|+|.|+ |+||...++.+...|+. |+++++++++++.. +++   +....   .|..+. +.++...+..  ..
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~---Ga~~~---i~~~~~~~~~~~~~~~~--~~   96 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL---GATDC---LNPRELDKPVQDVITEL--TA   96 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCSEE---ECGGGCSSCHHHHHHHH--HT
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHh---CCCcc---cCCccchhhhhhhHhhh--hc
Confidence            35789999975 99999999999999985 88889998876543 333   33322   232221 2233333222  12


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCC-CeEEEEcc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKG-SSVVLISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~iss  147 (255)
                      +.+|++|.++|...                          ..+..+..++++ |+++.++-
T Consensus        97 ~G~d~vie~~G~~~--------------------------~~~~a~~~~~~g~G~~v~vG~  131 (174)
T d1e3ia2          97 GGVDYSLDCAGTAQ--------------------------TLKAAVDCTVLGWGSCTVVGA  131 (174)
T ss_dssp             SCBSEEEESSCCHH--------------------------HHHHHHHTBCTTTCEEEECCC
T ss_pred             CCCcEEEEecccch--------------------------HHHHHHHHhhcCCeEEEecCC
Confidence            47999999998521                          223345566664 89999874

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.57  E-value=0.00048  Score=48.96  Aligned_cols=117  Identities=16%  Similarity=0.121  Sum_probs=65.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC---------eEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA---------SVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~---------~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      ..+|.|+||+|.+|++++..|+..+.         .++..+++.+.++....++... ......+...-.+.+       
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------   76 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV-------   76 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH-------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh-------
Confidence            45799999999999999999997653         1233345555555544444433 223333333222121       


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                          .+...|++|..+|....    +..+.++   .+..|+.-.-.+.+.+..+-.+...++.+|
T Consensus        77 ----~~~~advViitaG~~~~----pg~~r~d---l~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          77 ----AFKDADYALLVGAAPRK----AGMERRD---LLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             ----HTTTCSEEEECCCCCCC----TTCCHHH---HHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----hcccccEEEeecCcCCC----CCCcHHH---HHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence                13378999999997542    3344433   344555444444444444333445566665

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.56  E-value=0.00099  Score=46.78  Aligned_cols=112  Identities=11%  Similarity=0.071  Sum_probs=65.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+++.|.|+ |.+|..++..|+.+|  .+|+++|++++.++....++...   .........|.   ++           
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~-----------   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD-----------   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH-----------
Confidence            568888996 999999999999988  46999999988776655555431   22223333332   21           


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      +..-|++|.++|.....    .   +.-.+.+..|..-...+.+.+.++ .+.+.++++|
T Consensus        70 ~~~adivvitag~~~~~----g---~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivvt  121 (146)
T d1ez4a1          70 CKDADLVVITAGAPQKP----G---ESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA  121 (146)
T ss_dssp             GTTCSEEEECCCC-----------------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred             hccccEEEEecccccCC----C---CCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeC
Confidence            23689999999964321    1   122334455654444444444332 1445566655

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.56  E-value=4.9e-05  Score=52.84  Aligned_cols=73  Identities=15%  Similarity=0.179  Sum_probs=53.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |.++|.|+ |-+|+++++.|.++|+.|++++.+++..+.+.    ..+.  ..+..|.++++.++++      ...+.|.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~~--~~~~gd~~~~~~l~~a------~i~~a~~   67 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYAT--HAVIANATEENELLSL------GIRNFEY   67 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTCS--EEEECCTTCTTHHHHH------TGGGCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhCC--cceeeecccchhhhcc------CCccccE
Confidence            55777866 78999999999999999999999987766543    2333  3456899998887665      1125687


Q ss_pred             EEEcCC
Q 025273           93 VVSNAA   98 (255)
Q Consensus        93 lv~~ag   98 (255)
                      +|...+
T Consensus        68 vi~~~~   73 (134)
T d2hmva1          68 VIVAIG   73 (134)
T ss_dssp             EEECCC
T ss_pred             EEEEcC
Confidence            776644

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.54  E-value=0.0013  Score=47.55  Aligned_cols=117  Identities=13%  Similarity=0.043  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC---C----eEEEEeCCch--hHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEG---A----SVVVSSRKQK--NVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G---~----~V~~~~r~~~--~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      ..+|.||||+|.||++++..|++..   .    .+.+.+....  .++...-++... ......+..- ++..       
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~~-------   95 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDPY-------   95 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCHH-------
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccch-------
Confidence            3479999999999999999998743   2    3556665543  334444444433 1222222211 1211       


Q ss_pred             HHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           82 QTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                         +.+...|++|..+|....    ...+.++   .+..|..=.-.+.+.+.++-.+...|+.+|
T Consensus        96 ---~~~~~aDvVvi~ag~~rk----pg~tR~D---ll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          96 ---EVFEDVDWALLIGAKPRG----PGMERAA---LLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             ---HHTTTCSEEEECCCCCCC----TTCCHHH---HHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ---hhccCCceEEEeeccCCC----CCCcHHH---HHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence               223479999999997432    2344433   445565444444444444333455666665

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.52  E-value=6.2e-05  Score=55.09  Aligned_cols=102  Identities=15%  Similarity=0.142  Sum_probs=66.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +.++||+||+||+|...++.....|++|+.+++++++.+.++ ++   +....+   |-.+.+..+    .+.  -...|
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~-~l---Gad~vi---~~~~~~~~~----~l~--~~~~~   98 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SL---GASRVL---PRDEFAESR----PLE--KQVWA   98 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HH---TEEEEE---EGGGSSSCC----SSC--CCCEE
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH-hh---cccccc---ccccHHHHH----HHH--hhcCC
Confidence            458999999999999999999899999999999988865443 33   333222   211111100    000  02467


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCC
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQP  153 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~  153 (255)
                      .+|.+.|.            +               .....++.++.+|+++.++...+...
T Consensus        99 ~vvD~Vgg------------~---------------~~~~~l~~l~~~Griv~~G~~~~~~~  133 (177)
T d1o89a2          99 GAIDTVGD------------K---------------VLAKVLAQMNYGGCVAACGLAGGFTL  133 (177)
T ss_dssp             EEEESSCH------------H---------------HHHHHHHTEEEEEEEEECCCTTCSCC
T ss_pred             eeEEEcch------------H---------------HHHHHHHHhccccceEeecccCCccc
Confidence            78777652            0               13345677888899999987766543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=97.51  E-value=4.3e-05  Score=55.63  Aligned_cols=99  Identities=12%  Similarity=0.176  Sum_probs=64.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|.+|+|.|+ |++|...++.+...|+ .|+++++++++++..++    .+....   .|-+ .+.++...+...  ...
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~ga~~~---i~~~-~~~~~~~~~~~~--~~g  100 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGADHV---VDAR-RDPVKQVMELTR--GRG  100 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTCSEE---EETT-SCHHHHHHHHTT--TCC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----ccccee---ecCc-ccHHHHHHHhhC--CCC
Confidence            4789999986 9999999999988886 47778888776554432    233322   2333 333333332111  126


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      +|++|.++|...                          ..+..+..++++|+++.++
T Consensus       101 ~d~vid~~g~~~--------------------------~~~~a~~~l~~~G~iv~~G  131 (172)
T d1h2ba2         101 VNVAMDFVGSQA--------------------------TVDYTPYLLGRMGRLIIVG  131 (172)
T ss_dssp             EEEEEESSCCHH--------------------------HHHHGGGGEEEEEEEEECC
T ss_pred             ceEEEEecCcch--------------------------HHHHHHHHHhCCCEEEEEe
Confidence            999999998421                          1234466788889999886

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.50  E-value=0.00032  Score=51.06  Aligned_cols=80  Identities=10%  Similarity=0.172  Sum_probs=53.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHH-HHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ-RKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~   87 (255)
                      .+|.+|+|+|+ ||+|...++.+...|+ +|+++++++++++..+ ++   +....+   |-++.+. .+...+..  ..
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~---GA~~~i---n~~~~~~~~~~~~~~~--~g   97 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AV---GATECI---SPKDSTKPISEVLSEM--TG   97 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HH---TCSEEE---CGGGCSSCHHHHHHHH--HT
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hc---CCcEEE---CccccchHHHHHHHHh--cc
Confidence            35889999986 8999999999999995 6999999999877543 33   334333   3222221 22222111  12


Q ss_pred             CCCCEEEEcCCC
Q 025273           88 GKIDVVVSNAAA   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                      +.+|.+|.+.|.
T Consensus        98 ~G~d~vi~~~g~  109 (176)
T d1d1ta2          98 NNVGYTFEVIGH  109 (176)
T ss_dssp             SCCCEEEECSCC
T ss_pred             ccceEEEEeCCc
Confidence            379999999885

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.48  E-value=0.00044  Score=48.55  Aligned_cols=115  Identities=18%  Similarity=0.140  Sum_probs=67.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ++.|+||+|.+|.+++..|+.+|.  +++++|.+..+.+.  ..+..... ......-+ ...+..+.+       ..-|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~-~~~~~~~~-~~~~~~~~~-------~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIET-RATVKGYL-GPEQLPDCL-------KGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSS-SCEEEEEE-SGGGHHHHH-------TTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhh-hcCCCeEE-cCCChHHHh-------CCCC
Confidence            588999999999999999998885  39999988654332  33332211 11111111 222222222       3789


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      ++|..+|....  +  ..+.   .+.++.|..-.-.+.+.+.++ .+.+.++++|.
T Consensus        71 ivVitag~~~~--~--g~sR---~~ll~~N~~i~~~i~~~i~~~-~p~~iiivvtN  118 (144)
T d1mlda1          71 VVVIPAGVPRK--P--GMTR---DDLFNTNATIVATLTAACAQH-CPDAMICIISN  118 (144)
T ss_dssp             EEEECCSCCCC--T--TCCG---GGGHHHHHHHHHHHHHHHHHH-CTTSEEEECSS
T ss_pred             EEEECCCcCCC--C--CCCc---chHHHHHHHHHHHHHHHHHhc-CCCeEEEEecC
Confidence            99999996432  1  1222   223556665555555555544 35567777764

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.47  E-value=0.00044  Score=46.35  Aligned_cols=47  Identities=13%  Similarity=0.149  Sum_probs=38.7

Q ss_pred             CccccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh
Q 025273            1 MEKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (255)
Q Consensus         1 ~~~~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~   48 (255)
                      |+...+..+++||+|||.|++ .+|..-++.|++.|++|++++....+
T Consensus         1 M~~~Pi~l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~~   47 (113)
T d1pjqa1           1 MDHLPIFCQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFIP   47 (113)
T ss_dssp             CCCEEEEECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCCH
T ss_pred             CCccceEEEeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCCh
Confidence            344456678999999999975 49999999999999999998876543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.44  E-value=0.00074  Score=48.26  Aligned_cols=106  Identities=14%  Similarity=0.127  Sum_probs=76.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .+.-+|+|.|+ |-.|++.++-..+.|++|.++|.+.+.++++.......   +   .+-.++++.+++.++       .
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~---~---~~~~~~~~~l~~~~~-------~   95 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR---V---ELLYSNSAEIETAVA-------E   95 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG---S---EEEECCHHHHHHHHH-------T
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc---c---eeehhhhhhHHHhhc-------c
Confidence            45678999985 57799999999999999999999999988877665432   2   223456667666555       6


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      -|++|..+-+.....+                    ..+.+..+..|+++..||-++--.
T Consensus        96 aDivI~aalipG~~aP--------------------~lIt~~mv~~Mk~GSVIVDvaidq  135 (168)
T d1pjca1          96 ADLLIGAVLVPGRRAP--------------------ILVPASLVEQMRTGSVIVDVAVDQ  135 (168)
T ss_dssp             CSEEEECCCCTTSSCC--------------------CCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             CcEEEEeeecCCcccC--------------------eeecHHHHhhcCCCcEEEEeecCC
Confidence            7999999887653222                    223455678888888888777543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.44  E-value=0.00023  Score=51.17  Aligned_cols=99  Identities=19%  Similarity=0.269  Sum_probs=63.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|.+|||.|+ |++|...++.+...|++|+++++++++++..++    .+....   .|-++.+..+    .+.+.....
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~----~Ga~~~---~~~~~~~~~~----~~~~~~~~~   94 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGADLV---VNPLKEDAAK----FMKEKVGGV   94 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCSEE---ECTTTSCHHH----HHHHHHSSE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh----cCccee---cccccchhhh----hcccccCCC
Confidence            4789999875 999999988888899999999999887654332    343433   2443332222    222333355


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      |.+|.+++..           +               .+...++.++++|+++.++-
T Consensus        95 ~~~v~~~~~~-----------~---------------~~~~a~~~l~~~G~i~~~g~  125 (168)
T d1rjwa2          95 HAAVVTAVSK-----------P---------------AFQSAYNSIRRGGACVLVGL  125 (168)
T ss_dssp             EEEEESSCCH-----------H---------------HHHHHHHHEEEEEEEEECCC
T ss_pred             ceEEeecCCH-----------H---------------HHHHHHHHhccCCceEeccc
Confidence            6666665521           1               23445667788889888864

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.41  E-value=0.0002  Score=53.17  Aligned_cols=118  Identities=14%  Similarity=0.149  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|.+|||.|+ |++|...+..+...|+ +|+++++++++++..+    +.+....   .|-.+ +.+.+-+.++. ....
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~----~~Ga~~~---~~~~~-~~~~~~i~~~t-~g~g   94 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----AQGFEIA---DLSLD-TPLHEQIAALL-GEPE   94 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCEEE---ETTSS-SCHHHHHHHHH-SSSC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh----hccccEE---EeCCC-cCHHHHHHHHh-CCCC
Confidence            4889999986 8999888888888887 5888999987765433    2243332   23333 23322222221 1236


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      +|++|.+.|......+....           +..+.-..++..+..++++|+|+.++-..
T Consensus        95 ~D~vid~vG~~~~~~~~~~~-----------~~~~~~~~l~~~~~~~r~gG~v~~~G~~~  143 (195)
T d1kola2          95 VDCAVDAVGFEARGHGHEGA-----------KHEAPATVLNSLMQVTRVAGKIGIPGLYV  143 (195)
T ss_dssp             EEEEEECCCTTCBCSSTTGG-----------GSBCTTHHHHHHHHHEEEEEEEEECSCCC
T ss_pred             cEEEEECccccccCCcccce-----------eecCcHHHHHHHHHHHhcCCEEEEeeecC
Confidence            89999999853311111100           11111223445566778889999987433

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.39  E-value=0.00036  Score=51.07  Aligned_cols=92  Identities=17%  Similarity=0.107  Sum_probs=63.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..++||++.|.|.+. ||+.+++.+...|.+|+..+|...+..                   ....+++++++.      
T Consensus        38 ~~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~~~~-------------------~~~~~~l~ell~------   91 (181)
T d1qp8a1          38 PLIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPKEGP-------------------WRFTNSLEEALR------   91 (181)
T ss_dssp             CCCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCCCSS-------------------SCCBSCSHHHHT------
T ss_pred             CcccCceEEEecccc-ccccceeeeeccccccccccccccccc-------------------eeeeechhhhhh------
Confidence            348899999998655 999999999999999999998754210                   111123334433      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       ..|+++.+.-....  ...-.+                   +..+..|+++..+|++|-
T Consensus        92 -~sDiv~~~~pl~~~--t~~li~-------------------~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1          92 -EARAAVCALPLNKH--TRGLVK-------------------YQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             -TCSEEEECCCCSTT--TTTCBC-------------------HHHHTTSCTTCEEEECSC
T ss_pred             -ccchhhcccccccc--cccccc-------------------cceeeeccccceEEeccc
Confidence             78999987665432  222222                   345678888899999873

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.00011  Score=47.63  Aligned_cols=38  Identities=16%  Similarity=0.230  Sum_probs=34.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      +++||+++|.|. |..|.++++.|.++|++|++.|.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            589999999998 66799999999999999999998655

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.30  E-value=0.00058  Score=49.65  Aligned_cols=42  Identities=24%  Similarity=0.217  Sum_probs=36.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV   54 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~   54 (255)
                      .|++-|.|+ |.+|.+++..|+++|+.|.+.+|+++..+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            378899988 899999999999999999999999877666544

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.25  E-value=0.0006  Score=48.19  Aligned_cols=81  Identities=12%  Similarity=0.081  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +-|+|.|.||.|-+|..+++.|.++|+.|.+.+|+........    ...........   ....+...+.++.....+=
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~----~~~~~~v~~~~---~~~~~~~v~~~~~~~~~~~   80 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI----LANADVVIVSV---PINLTLETIERLKPYLTEN   80 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH----HTTCSEEEECS---CGGGHHHHHHHHGGGCCTT
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh----hhhcccccccc---chhhheeeeecccccccCC
Confidence            4578999999999999999999999999999999976544321    12334443333   3445556666665444333


Q ss_pred             CEEEEcCC
Q 025273           91 DVVVSNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      .+++..+.
T Consensus        81 ~iiiD~~S   88 (152)
T d2pv7a2          81 MLLADLTS   88 (152)
T ss_dssp             SEEEECCS
T ss_pred             ceEEEecc
Confidence            35555543

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.21  E-value=0.0005  Score=52.64  Aligned_cols=106  Identities=17%  Similarity=0.163  Sum_probs=77.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++++||=.|++.|.   ++..|+++|.+|+.+|.+++.++.+++.....+.++.++..|+.+.+-           .+
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~~-----------~~  100 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI-----------NR  100 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC-----------SC
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhcc-----------cc
Confidence            3567899999998885   778889999999999999999888877777777788999888865321           13


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEE
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVL  144 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~  144 (255)
                      +.|++++..+...     .-.+.++..+           +++.+..+|+++|.+++
T Consensus       101 ~fD~i~~~~~~~~-----~~~~~~~~~~-----------~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         101 KFDLITCCLDSTN-----YIIDSDDLKK-----------YFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             CEEEEEECTTGGG-----GCCSHHHHHH-----------HHHHHHTTEEEEEEEEE
T ss_pred             cccccceeeeeee-----ccCCHHHHHH-----------HHHHHHHhCCCCeEEEE
Confidence            6899887544322     1123333333           55667788888888775

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.20  E-value=0.0056  Score=42.52  Aligned_cols=111  Identities=13%  Similarity=0.068  Sum_probs=65.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           14 VAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++.|+|+ |.+|.+++..|+..|  .+++++|++++.++.....+...    .....+...+.  .+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~--~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND--YAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC--GGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCC--HHH-----------h
Confidence            5778896 999999999999987  36999999988776654444322    22333332222  222           2


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ..-|++|..+|.....    ..+.   ...+..|..=...+.+.+.++- +.+.++++|
T Consensus        68 ~dadvvvitag~~~~~----g~~r---~~l~~~N~~i~~~i~~~i~~~~-p~aivivvt  118 (142)
T d1guza1          68 ANSDIVIITAGLPRKP----GMTR---EDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVS  118 (142)
T ss_dssp             TTCSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHHC-SSCEEEECC
T ss_pred             cCCeEEEEEEecCCCC----CCch---HHHHHHHHHHHHHHHHHhhccC-CCeEEEEec
Confidence            2689999999975422    2222   2233444443333444443322 455666665

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.19  E-value=0.00035  Score=50.73  Aligned_cols=79  Identities=14%  Similarity=0.197  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   88 (255)
                      .|.+|+|.|+ +|+|...+.+++..|+ +|+++++++++.+..++    .+....+   |-.+ ++.+.+..+..  ..+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~----~Ga~~~i---~~~~~~~~~~~~~~~~--~~~   97 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGATECV---NPQDYKKPIQEVLTEM--SNG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSEEE---CGGGCSSCHHHHHHHH--TTS
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH----hCCeeEE---ecCCchhHHHHHHHHH--hcC
Confidence            5789999999 6899999999999985 69999999888664432    2333222   2222 22233333322  124


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|++|.+.|.
T Consensus        98 G~D~vid~~G~  108 (176)
T d2jhfa2          98 GVDFSFEVIGR  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEecCCc
Confidence            79999999885

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.18  E-value=0.00035  Score=50.40  Aligned_cols=100  Identities=21%  Similarity=0.163  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      -.|.+|+|.|+ |++|...++.+...|++|+++++++++++..+ ++   +....+   |-.+....   .+   ...+.
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~l---Ga~~~i---~~~~~~~~---~~---~~~~~   91 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GADHYI---ATLEEGDW---GE---KYFDT   91 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCSEEE---EGGGTSCH---HH---HSCSC
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-cc---CCcEEe---eccchHHH---HH---hhhcc
Confidence            35889999987 89999999888888999999999988876543 33   333332   22211111   11   22347


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .|.++.+.+.... ..+.                       ..++.++++|++++++-
T Consensus        92 ~d~vi~~~~~~~~-~~~~-----------------------~~~~~l~~~G~iv~~G~  125 (168)
T d1piwa2          92 FDLIVVCASSLTD-IDFN-----------------------IMPKAMKVGGRIVSISI  125 (168)
T ss_dssp             EEEEEECCSCSTT-CCTT-----------------------TGGGGEEEEEEEEECCC
T ss_pred             cceEEEEecCCcc-chHH-----------------------HHHHHhhccceEEEecc
Confidence            8999998775431 1110                       13566778899999864

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.18  E-value=0.0049  Score=42.99  Aligned_cols=111  Identities=14%  Similarity=0.082  Sum_probs=65.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCch--hHHHHHHHHHhc----C--CeEEEEEecCCCHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQK--NVDEAVVKLKAR----G--IEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~--~~~~~~~~~~~~----~--~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      ++|.|.||+|.+|.+++..|+.+|.  ++++++++++  .++....++...    .  .++.....+  +.+.       
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~~-------   71 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLRI-------   71 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGGG-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHHH-------
Confidence            3589999999999999999999984  6999998863  344444444431    2  222222221  1211       


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                          +..-|++|.+||....    ...+..   ..+..|..=.-.+.+.+.++-  ...|+.+
T Consensus        72 ----l~~aDvVVitAG~~~~----~g~sR~---dl~~~Na~iv~~i~~~i~~~~--~~~iivV  121 (145)
T d1hyea1          72 ----IDESDVVIITSGVPRK----EGMSRM---DLAKTNAKIVGKYAKKIAEIC--DTKIFVI  121 (145)
T ss_dssp             ----GTTCSEEEECCSCCCC----TTCCHH---HHHHHHHHHHHHHHHHHHHHC--CCEEEEC
T ss_pred             ----hccceEEEEecccccC----CCCChh---hhhhhhHHHHHHHHHHHhccC--CCeEEEE
Confidence                2368999999996432    223332   345556654444555554442  2345544

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.17  E-value=0.0052  Score=43.57  Aligned_cols=112  Identities=13%  Similarity=0.145  Sum_probs=69.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      +..++|.|.|+ |.+|..++..|+.+|.  +++++|++++.++....++...    +.... ...  .+.+.        
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~-~~~--~d~~~--------   85 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKI-VAD--KDYSV--------   85 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEE-EEC--SSGGG--------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeE-Eec--cchhh--------
Confidence            45678999996 9999999999999985  5999999988777666566442    22222 221  22222        


Q ss_pred             HHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEcc
Q 025273           84 IEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLISS  147 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~iss  147 (255)
                         +..-|++|..||.....    ..+..   +.+..|..    +.+.+.+.++   +.+.++++|-
T Consensus        86 ---~~~adiVVitAg~~~~~----g~tR~---~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          86 ---TANSKIVVVTAGVRQQE----GESRL---NLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             ---GTTCSEEEECCSCCCCT----TCCGG---GGHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ---cccccEEEEecCCcccc----CcchH---HHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCC
Confidence               23689999999975421    22221   22334443    3444444433   4566777763

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.12  E-value=0.0012  Score=48.15  Aligned_cols=107  Identities=14%  Similarity=0.056  Sum_probs=71.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-------------CCeEEEEEecCCCHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-------------GIEVIGVVCHVSNGQQR   76 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v   76 (255)
                      .+|.+||..|++.|   ..+..|+++|++|+.+|.++..++..++.....             +....++.+|..+....
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            46889999999887   467799999999999999999988877766432             22346777888765542


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           77 KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ..         ...|.++......       ....+++           ....+.+...++++|.++...
T Consensus        96 ~~---------~~~D~i~~~~~l~-------~l~~~~~-----------~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          96 DI---------GHCAAFYDRAAMI-------ALPADMR-----------ERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             HH---------HSEEEEEEESCGG-------GSCHHHH-----------HHHHHHHHHHSCSEEEEEEEE
T ss_pred             cc---------cceeEEEEEeeeE-------ecchhhh-----------HHHHHHHHHhcCCCcEEEEEE
Confidence            22         1567776543321       1233322           225566677888888876544

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.11  E-value=0.00045  Score=49.83  Aligned_cols=45  Identities=16%  Similarity=0.169  Sum_probs=39.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKL   56 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~   56 (255)
                      ++|+|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+++.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6789999987 8999999999999997 5999999998888777655

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.09  E-value=0.00072  Score=49.52  Aligned_cols=94  Identities=20%  Similarity=0.209  Sum_probs=63.2

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+.+|++.|.| .|.||+++++.+...|.+|+..++...+......     +  +.        ..+++++++       
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~-----~--~~--------~~~l~ell~-------   97 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL-----G--IE--------LLSLDDLLA-------   97 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH-----T--CE--------ECCHHHHHH-------
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhc-----C--ce--------eccHHHHHh-------
Confidence            47899999998 6899999999999999999999987654332111     1  01        113445555       


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      .-|+++.+........  .-                   +.+..+..|+++..+||+|
T Consensus        98 ~sDiv~~~~Plt~~T~--~l-------------------in~~~l~~mk~~a~lIN~s  134 (184)
T d1ygya1          98 RADFISVHLPKTPETA--GL-------------------IDKEALAKTKPGVIIVNAA  134 (184)
T ss_dssp             HCSEEEECCCCSTTTT--TC-------------------BCHHHHTTSCTTEEEEECS
T ss_pred             hCCEEEEcCCCCchhh--hh-------------------hhHHHHhhhCCCceEEEec
Confidence            4699887766543221  11                   2233567788888888887

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.0066  Score=42.29  Aligned_cols=115  Identities=17%  Similarity=0.128  Sum_probs=65.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc-C--CeEEEEeCCchhHHHHHHHHHhcCCeEEE-EEecCCCHHHHHHHHHHHHHHhC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLE-G--ASVVVSSRKQKNVDEAVVKLKARGIEVIG-VVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++|.|+|++|.+|.+++..|+.+ +  .++++.|..+ ..+....++......... ...+-.+.+.    +       .
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~----~-------~   68 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA----L-------E   68 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHH----H-------T
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccc----c-------C
Confidence            36889999999999999988654 4  5699999864 444444455443221111 1122222222    1       2


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      .-|++|..+|.....    ..+.   .+.+..|..-.-.+.+.+.++- +.+.++++|.
T Consensus        69 ~aDvvvitaG~~~k~----g~~R---~dl~~~N~~i~~~v~~~i~~~~-p~aivivvtN  119 (145)
T d2cmda1          69 GADVVLISAGVRRKP----GMDR---SDLFNVNAGIVKNLVQQVAKTC-PKACIGIITN  119 (145)
T ss_dssp             TCSEEEECCSCCCCT----TCCG---GGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSS
T ss_pred             CCCEEEECCCccCCC----Ccch---hhHHHHHHHHHHHHHHHHHhhC-CCcEEEEccC
Confidence            679999999975321    1222   2234556544444444444432 4566777764

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.06  E-value=0.0028  Score=44.32  Aligned_cols=74  Identities=15%  Similarity=0.153  Sum_probs=51.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      |++.|+|+ |.+|..++..|+.+|.  +++++|++++.++....++...    .........   +.+.           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWAA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGGG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc---CHHH-----------
Confidence            67888895 9999999999999884  6999999988776655555432    222222222   2222           


Q ss_pred             hCCCCEEEEcCCCCC
Q 025273           87 FGKIDVVVSNAAANP  101 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~  101 (255)
                      +..-|++|..||...
T Consensus        67 l~~adiVVitaG~~~   81 (146)
T d1hyha1          67 LADADVVISTLGNIK   81 (146)
T ss_dssp             GTTCSEEEECCSCGG
T ss_pred             hccccEEEEeccccc
Confidence            226899999999643

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.06  E-value=0.0085  Score=42.40  Aligned_cols=77  Identities=13%  Similarity=0.115  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      ++..+|.|.|+ |.+|..++..|+.+|.  +++++|++.+.++....++...    +........|.   +.        
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~~--------   84 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---NV--------   84 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---GG--------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---hh--------
Confidence            33456888896 9999999999999875  5999999988877666666542    22222222222   21        


Q ss_pred             HHHhCCCCEEEEcCCCCC
Q 025273           84 IEKFGKIDVVVSNAAANP  101 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~  101 (255)
                         +..-|++|..||...
T Consensus        85 ---~~~adivvitag~~~   99 (159)
T d2ldxa1          85 ---SANSKLVIITAGARM   99 (159)
T ss_dssp             ---GTTEEEEEECCSCCC
T ss_pred             ---hccccEEEEeccccc
Confidence               236899999999754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.03  E-value=0.0022  Score=45.79  Aligned_cols=81  Identities=20%  Similarity=0.161  Sum_probs=53.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh----------cCCeEEEEEecCCCHHHHHHHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA----------RGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      ++.|.|. |-+|..+++.|.++|++|++.+|+++..+..++.-..          ....+.++.   ...++++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIila---vp~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC---TPIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC---SCHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeeccccccccccccc---CcHhhhhhhhhhh
Confidence            4667755 9999999999999999999999998776655442100          022333332   2366788888888


Q ss_pred             HHHhCCCCEEEEcCC
Q 025273           84 IEKFGKIDVVVSNAA   98 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag   98 (255)
                      ...+.+=.++++.++
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            665544445555543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=97.01  E-value=0.00094  Score=49.40  Aligned_cols=94  Identities=16%  Similarity=0.167  Sum_probs=62.4

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..++||++.|.| .|.||+.+++.|...|++|+..++.......    .            +....+++++++.      
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~----~------------~~~~~~~l~~~l~------   95 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELE----K------------KGYYVDSLDDLYK------   95 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHH----H------------TTCBCSCHHHHHH------
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccc----c------------ceeeecccccccc------
Confidence            458899999997 5789999999999999999999877553221    0            0111234555555      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                       .-|+++.+.-....  ...-.+.                   ..+..|+++..+||+|
T Consensus        96 -~sDii~~~~plt~~--T~~li~~-------------------~~l~~mk~~a~lIN~s  132 (197)
T d1j4aa1          96 -QADVISLHVPDVPA--NVHMIND-------------------ESIAKMKQDVVIVNVS  132 (197)
T ss_dssp             -HCSEEEECSCCCGG--GTTCBSH-------------------HHHHHSCTTEEEEECS
T ss_pred             -ccccccccCCcccc--ccccccH-------------------HHHhhhCCccEEEecC
Confidence             46998877665431  1122222                   2346778888888886

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00075  Score=49.78  Aligned_cols=44  Identities=20%  Similarity=0.276  Sum_probs=38.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK   57 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   57 (255)
                      |+|.|.|+ |-+|..+|..|+.+|+.|++.+++++.+++..+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            78999998 789999999999999999999999988776655543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.98  E-value=0.0041  Score=43.87  Aligned_cols=120  Identities=13%  Similarity=0.039  Sum_probs=67.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +.+++.|.|+ |.+|..++..|+..+. +++++|.+++.++.....+...    +........  ++.+   ..+     
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~~---~~~-----   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSYE---AAL-----   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSHH---HHH-----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cchh---hhh-----
Confidence            4578888997 9999999999888884 7999999988776665555331    111111111  1121   111     


Q ss_pred             HhCCCCEEEEcCCCCCCCCC-ccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           86 KFGKIDVVVSNAAANPSVDS-ILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                        ..-|++|..+|.....+. -...+.   ...+..|..-...+.+.+.++- +.+.++++|.
T Consensus        75 --~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~iv~~i~~~i~~~~-p~aiviivsN  131 (154)
T d1pzga1          75 --TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTN  131 (154)
T ss_dssp             --TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCS
T ss_pred             --cCCCeEEEecccccCCCCCCcccch---hhhhhhhHHHHHHHHHHHHhcC-CCcEEEEeCC
Confidence              268999999997643221 111222   1223444443344444333322 4556666653

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.97  E-value=0.0076  Score=41.70  Aligned_cols=107  Identities=15%  Similarity=0.127  Sum_probs=64.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++.|.|+ |.+|.+++..++.++.  +++++|++++.++....++...   ..+......|   .++           +.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH-----------hc
Confidence            5677896 8999999999998873  5999999988777655554432   2233332222   222           22


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhccc---CCCeEEEEc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQ---KGSSVVLIS  146 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~is  146 (255)
                      .-|++|.++|....    ...+..   +.+..|.    .+.+.+.+.++   +.+.++++|
T Consensus        67 ~adivvitag~~~~----~g~~r~---dl~~~N~----~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          67 GSDVVIVAAGVPQK----PGETRL---QLLGRNA----RVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             TCSEEEECCCCCCC----SSCCHH---HHHHHHH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCEEEEecccccC----CCcchh---hhhcccc----chHHHHHHHHHhcCCCcEEEEeC
Confidence            68999999997542    223322   2234443    23444444443   455666665

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.97  E-value=0.0085  Score=41.55  Aligned_cols=75  Identities=17%  Similarity=0.128  Sum_probs=49.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      |++.|.|+ |.+|.+++..|+.++. .++++|.+++..+....++...    +....+..++  +.+.           +
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~--d~~~-----------~   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTN--NYAD-----------T   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecC--cHHH-----------h
Confidence            46777786 9999999999998874 7999999988766655554321    2222222221  1112           2


Q ss_pred             CCCCEEEEcCCCCC
Q 025273           88 GKIDVVVSNAAANP  101 (255)
Q Consensus        88 g~~d~lv~~ag~~~  101 (255)
                      ..-|++|.+||...
T Consensus        68 ~~advvvitag~~~   81 (142)
T d1uxja1          68 ANSDVIVVTSGAPR   81 (142)
T ss_dssp             TTCSEEEECCSCC-
T ss_pred             cCCCEEEEeeeccC
Confidence            26899999999753

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.96  E-value=0.00031  Score=49.69  Aligned_cols=43  Identities=14%  Similarity=0.286  Sum_probs=36.6

Q ss_pred             ccccccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC
Q 025273            2 EKMKMAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK   45 (255)
Q Consensus         2 ~~~~~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~   45 (255)
                      +++.....++||+|||.|| |.+|..-++.|++.|++|++++..
T Consensus         3 ~~lpl~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           3 KSLQLAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCEEEEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             ccchhheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4445566799999999999 569999999999999999998654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.95  E-value=0.002  Score=45.40  Aligned_cols=76  Identities=12%  Similarity=0.051  Sum_probs=57.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVV   93 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~l   93 (255)
                      .++|.|. |-+|+.++++|.++|..|++++.+++......++..  ...+.++..|.++++-++++-      ..+.|.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~--~~~~~vi~Gd~~d~~~L~~a~------i~~a~~v   75 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL--GDNADVIPGDSNDSSVLKKAG------IDRCRAI   75 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH--CTTCEEEESCTTSHHHHHHHT------TTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh--cCCcEEEEccCcchHHHHHhc------cccCCEE
Confidence            4777877 699999999999999999999999876555554443  235777889999988766541      1356778


Q ss_pred             EEcCC
Q 025273           94 VSNAA   98 (255)
Q Consensus        94 v~~ag   98 (255)
                      |....
T Consensus        76 i~~~~   80 (153)
T d1id1a_          76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEccc
Confidence            76643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.94  E-value=0.00072  Score=49.15  Aligned_cols=49  Identities=12%  Similarity=0.291  Sum_probs=41.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA   58 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   58 (255)
                      .+++||+|||.|+ ||.+++++..|.+.| +|+++.|+.++.+.+.+.+..
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            3589999999976 678999999997777 899999999998888877754

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.91  E-value=0.00097  Score=49.45  Aligned_cols=43  Identities=19%  Similarity=0.302  Sum_probs=37.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDE   51 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~   51 (255)
                      .+|+||+|+|.| .|.+|+++++.|.+.|++|++.+.+......
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            368999999997 7889999999999999999999998766554

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.88  E-value=0.0021  Score=47.98  Aligned_cols=103  Identities=15%  Similarity=0.044  Sum_probs=72.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +.+||=.||++|.   ++..|++.|++|+.+|.+.+.++..++.....+..+.++..|..+..--          .+..|
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~~----------~~~fD  104 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFE----------DKTFD  104 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSC----------TTCEE
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccccc----------CcCce
Confidence            4679999998875   6678889999999999999988888877776667778888887764310          12689


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      ++++.....       ..+.+++.+           +++.+...|+++|++++.
T Consensus       105 ~I~~~~~l~-------~~~~~d~~~-----------~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         105 YVIFIDSIV-------HFEPLELNQ-----------VFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EEEEESCGG-------GCCHHHHHH-----------HHHHHHHHEEEEEEEEEE
T ss_pred             EEEEecchh-------hCChhHHHH-----------HHHHHHHHcCcCcEEEEE
Confidence            988764432       123333222           455667788888887654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.88  E-value=0.001  Score=48.06  Aligned_cols=79  Identities=14%  Similarity=0.219  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN-GQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   88 (255)
                      .|.+|+|.|+ ||+|...++.+...|+. |+++++++++++. .+++   +....+   |..+ .+.+.+.++..  ..+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l---Ga~~~i---~~~~~~~~~~~~~~~~--~~~   97 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF---GATECI---NPQDFSKPIQEVLIEM--TDG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH---TCSEEE---CGGGCSSCHHHHHHHH--TTS
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh---CCcEEE---eCCchhhHHHHHHHHH--cCC
Confidence            5789999998 58999999999999975 7777787777553 3344   333222   2222 22333333322  124


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|+++.+.|.
T Consensus        98 g~D~vid~~G~  108 (176)
T d2fzwa2          98 GVDYSFECIGN  108 (176)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEeeecCCC
Confidence            79999999884

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.87  E-value=0.0028  Score=48.23  Aligned_cols=103  Identities=18%  Similarity=0.076  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      ++++||=.|++.|   ..+..|+++|++|+.++.+++.++..++.....+.++.+++.|+.+.+-           -+..
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------cccc
Confidence            4678999999887   4567788999999999999999888888877777789999999865321           1368


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEE
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVL  144 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~  144 (255)
                      |.+++.-+...      -.+.++..           .+++.+...|+++|.+++
T Consensus       107 D~I~~~~~~~~------~~~~~~~~-----------~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         107 DAVTMFFSTIM------YFDEEDLR-----------KLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             EEEEECSSGGG------GSCHHHHH-----------HHHHHHHHHEEEEEEEEE
T ss_pred             chHhhhhhhhh------cCChHHHH-----------HHHHHHHHHcCCCcEEEE
Confidence            88887533221      12233322           245666778888887765

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.83  E-value=0.0077  Score=42.21  Aligned_cols=75  Identities=13%  Similarity=0.017  Sum_probs=50.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++.|.|+ |.+|.+++..|+..+. +++++|++++.++....++...    +.+..+...|.  .+.           +
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~~~-----------~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--YDD-----------L   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--GGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--ccc-----------c
Confidence            46778895 9999999988888774 5999999988777665555332    23333333221  222           2


Q ss_pred             CCCCEEEEcCCCCC
Q 025273           88 GKIDVVVSNAAANP  101 (255)
Q Consensus        88 g~~d~lv~~ag~~~  101 (255)
                      ..-|++|.++|...
T Consensus        70 ~~advvvitag~~~   83 (150)
T d1t2da1          70 AGADVVIVTAGFTK   83 (150)
T ss_dssp             TTCSEEEECCSCSS
T ss_pred             CCCcEEEEeccccc
Confidence            36899999999754

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.80  E-value=0.0034  Score=43.67  Aligned_cols=110  Identities=14%  Similarity=0.069  Sum_probs=59.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      ++.|.|+ |.+|..++..++.++.  +++++|++++.++....++...   .........   +.+           .+.
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----------~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----------DVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----------HhC
Confidence            4566686 9999999999999875  6999999987766555555432   112221111   111           133


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      .-|++|..||....    ...+.   ...+..|..=...+.+.+.++- +.+.++++|
T Consensus        68 ~adivvitag~~~~----~~~~r---~~l~~~N~~i~~~i~~~i~~~~-p~ai~ivvt  117 (142)
T d1y6ja1          68 DCDVIVVTAGANRK----PGETR---LDLAKKNVMIAKEVTQNIMKYY-NHGVILVVS  117 (142)
T ss_dssp             TCSEEEECCCC----------CH---HHHHHHHHHHHHHHHHHHHHHC-CSCEEEECS
T ss_pred             CCceEEEecccccC----cCcch---hHHhhHHHHHHHHHHHHhhccC-CCceEEEec
Confidence            68999999996532    11222   2334555543333333333322 445666665

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.79  E-value=0.023  Score=39.30  Aligned_cols=112  Identities=14%  Similarity=0.106  Sum_probs=65.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++.|.|+ |.+|.+++..|+.+|.  +++++|++++.++....++...   .....+...+-  .+.           +
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~--~~~-----------~   67 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD--PEI-----------C   67 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC--GGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCC--HHH-----------h
Confidence            35777796 9999999999999985  5999999988776555545432   11222222211  222           1


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ..-|++|..||....    ...+..   +.+..|..=.-.+.+.+.++ .+.+.++++|
T Consensus        68 ~daDvVVitaG~~~~----~g~~R~---dl~~~N~~i~~~i~~~i~~~-~p~ai~ivvt  118 (143)
T d1llda1          68 RDADMVVITAGPRQK----PGQSRL---ELVGATVNILKAIMPNLVKV-APNAIYMLIT  118 (143)
T ss_dssp             TTCSEEEECCCCCCC----TTCCHH---HHHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred             hCCcEEEEecccccC----CCCchh---hhhhhhHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence            257999999997432    223332   23455553333333333332 2445666665

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=96.79  E-value=0.0016  Score=47.95  Aligned_cols=118  Identities=18%  Similarity=0.167  Sum_probs=77.1

Q ss_pred             CCCEEE-EEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAI-VTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vl-ItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .+.++| +|-|+||.-.++.+.+ . +.+|+++|++++.++..++.+...+.++.+++.+.++...+   +....  .+.
T Consensus        23 ~~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~~--~~~   95 (192)
T d1m6ya2          23 DEKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTLG--IEK   95 (192)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHTT--CSC
T ss_pred             CCCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHcC--CCC
Confidence            345555 7778888888877766 2 56899999999999988888877788999999998865443   22211  248


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      +|.++...|++..  .+.+ ...++..        .-..+..+...++++|+++.++
T Consensus        96 vdgIl~DlGvSs~--Qld~-~~r~~~~--------~~~~L~~a~~~Lk~gG~l~ii~  141 (192)
T d1m6ya2          96 VDGILMDLGVSTY--QLKG-ENRELEN--------LKEFLKKAEDLLNPGGRIVVIS  141 (192)
T ss_dssp             EEEEEEECSCCHH--HHHT-SHTHHHH--------HHHHHHHGGGGEEEEEEEEEEE
T ss_pred             cceeeeccchhHh--hhhh-hhccchh--------HHHHHHHHHHhcCCCCeeeeec
Confidence            9999999887431  0000 0111111        1222344455667888888776

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.76  E-value=0.002  Score=47.44  Aligned_cols=97  Identities=15%  Similarity=0.137  Sum_probs=64.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..++||++.|.| -|.||+.+++.+...|++|+..++.......  ...            ++....++++++.      
T Consensus        45 ~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--~~~------------~~~~~~~l~~ll~------  103 (193)
T d1mx3a1          45 ARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVE--RAL------------GLQRVSTLQDLLF------  103 (193)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHH--HHH------------TCEECSSHHHHHH------
T ss_pred             eeeeCceEEEec-cccccccceeeeeccccceeeccCcccccch--hhh------------ccccccchhhccc------
Confidence            458999999996 6889999999999999999999987553221  111            1112234555555      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                       .-|+++.+........  .-                   +.+..+..|+++..+||+|=
T Consensus       104 -~sD~i~~~~plt~~T~--~l-------------------i~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         104 -HSDCVTLHCGLNEHNH--HL-------------------INDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             -HCSEEEECCCCCTTCT--TS-------------------BSHHHHTTSCTTEEEEECSC
T ss_pred             -cCCEEEEeecccccch--hh-------------------hhHHHHhccCCCCeEEecCC
Confidence             4688887766543221  11                   23345677888888888874

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.0032  Score=47.46  Aligned_cols=127  Identities=12%  Similarity=0.048  Sum_probs=78.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh------------------cCCeEEEEEecCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA------------------RGIEVIGVVCHVSN   72 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~~Dv~~   72 (255)
                      .+++||..|++.|   ..+..|+++|++|+.+|.++...+..+++...                  .+.++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            5789999999887   45888999999999999999888877665432                  13467788888765


Q ss_pred             HHHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccC
Q 025273           73 GQQRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQ  152 (255)
Q Consensus        73 ~~~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~  152 (255)
                      .....         .+..|.++-......       ..+++...           ..+.+...++++|+++.+.-.... 
T Consensus       122 l~~~~---------~~~fd~i~~~~~l~~-------~~~~~r~~-----------~~~~~~~~LkpgG~~~l~~~~~~~-  173 (229)
T d2bzga1         122 LPRTN---------IGKFDMIWDRGALVA-------INPGDRKC-----------YADTMFSLLGKKFQYLLCVLSYDP-  173 (229)
T ss_dssp             GGGSC---------CCCEEEEEESSSTTT-------SCGGGHHH-----------HHHHHHHTEEEEEEEEEEEEECCT-
T ss_pred             ccccc---------cCceeEEEEEEEEEe-------ccchhhHH-----------HHHHHHhhcCCcceEEEEEcccCC-
Confidence            43211         135666665443322       22222222           344456788888886665533221 


Q ss_pred             CCCCChhhHhhHHHHH
Q 025273          153 PQSSMAMYGVTKTALL  168 (255)
Q Consensus       153 ~~~~~~~y~~sK~a~~  168 (255)
                      .....++|..++.-+.
T Consensus       174 ~~~~gpp~~~~~~el~  189 (229)
T d2bzga1         174 TKHPGPPFYVPHAEIE  189 (229)
T ss_dssp             TTCCCSSCCCCHHHHH
T ss_pred             CCCCCCCCCCCHHHHH
Confidence            1222345666664433

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.76  E-value=0.0033  Score=46.13  Aligned_cols=97  Identities=13%  Similarity=0.123  Sum_probs=64.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..++||++.|.| -|.||+.+++.+...|.+|+..++...........             .....++++++++      
T Consensus        43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~-------------~~~~~~~l~~ll~------  102 (191)
T d1gdha1          43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASY-------------QATFHDSLDSLLS------  102 (191)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHH-------------TCEECSSHHHHHH------
T ss_pred             ceecccceEEee-cccchHHHHHHHHhhccccccccccccccchhhcc-------------cccccCCHHHHHh------
Confidence            357899999997 57899999999999999999998875543322111             1111234555555      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                       .-|+++.+........  .-.                   .+..+..|+++..+||+|
T Consensus       103 -~sD~v~l~~plt~~T~--~li-------------------~~~~l~~mk~~a~lIN~s  139 (191)
T d1gdha1         103 -VSQFFSLNAPSTPETR--YFF-------------------NKATIKSLPQGAIVVNTA  139 (191)
T ss_dssp             -HCSEEEECCCCCTTTT--TCB-------------------SHHHHTTSCTTEEEEECS
T ss_pred             -hCCeEEecCCCCchHh--hee-------------------cHHHhhCcCCccEEEecC
Confidence             4699887766543211  112                   233567888888888887

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.76  E-value=0.0046  Score=44.57  Aligned_cols=84  Identities=14%  Similarity=0.175  Sum_probs=60.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHH---------------hcCCeEEEEEecCCCHHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK---------------ARGIEVIGVVCHVSNGQQRKN   78 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~~~Dv~~~~~v~~   78 (255)
                      .|-|.|- |-+|..+++.|+++|++|++.+|++++.+.+.++-.               ..-.....+...+.+.+.+.+
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~   82 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN   82 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHH
Confidence            4666665 899999999999999999999999988887654311               111122344456777888888


Q ss_pred             HHHHHHHHhCCCCEEEEcCC
Q 025273           79 LINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag   98 (255)
                      +.+.+.....+=+++|...-
T Consensus        83 v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          83 FIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHhccccCcEEEecCc
Confidence            88888776655567776643

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.73  E-value=0.0055  Score=43.17  Aligned_cols=79  Identities=14%  Similarity=0.186  Sum_probs=46.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEeCCchh--HHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA-------SVVVSSRKQKN--VDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      ..+|.|+||+|.+|++++..|+..+.       .+++.+.+...  ++.+..++... ......+..  ++..  .    
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~--~----   74 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--TDKE--E----   74 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--ESCH--H----
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--Cccc--c----
Confidence            45799999999999999999986542       36666665433  33333333322 122222221  1111  1    


Q ss_pred             HHHHHhCCCCEEEEcCCCCC
Q 025273           82 QTIEKFGKIDVVVSNAAANP  101 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~  101 (255)
                         +.+...|++|..+|...
T Consensus        75 ---~~~~~~dvVVitag~~~   91 (154)
T d5mdha1          75 ---IAFKDLDVAILVGSMPR   91 (154)
T ss_dssp             ---HHTTTCSEEEECCSCCC
T ss_pred             ---cccCCceEEEEecccCC
Confidence               11237899999999754

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.68  E-value=0.0026  Score=46.59  Aligned_cols=100  Identities=16%  Similarity=0.187  Sum_probs=64.8

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ...++++++.|.| .|.||+++++.|...|.+|+..++........ +..            .+....+++++++     
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~-~~~------------~~~~~~~l~~~l~-----   99 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVE-KEL------------NLTWHATREDMYP-----   99 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHH-HHH------------TCEECSSHHHHGG-----
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecccccccc-ccc------------cccccCCHHHHHH-----
Confidence            3458899999998 67899999999999999999999875442222 111            1111223333433     


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                        ..|+++.+......  ...-                   +....+..|+++..+||+|-.
T Consensus       100 --~sD~v~~~~plt~~--T~~l-------------------i~~~~l~~mk~ga~lIN~aRG  138 (188)
T d2naca1         100 --VCDVVTLNCPLHPE--TEHM-------------------INDETLKLFKRGAYIVNTARG  138 (188)
T ss_dssp             --GCSEEEECSCCCTT--TTTC-------------------BSHHHHTTSCTTEEEEECSCG
T ss_pred             --hccchhhccccccc--chhh-------------------hHHHHHHhCCCCCEEEecCch
Confidence              67998877665432  1122                   223356788888888888743

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.002  Score=50.50  Aligned_cols=36  Identities=28%  Similarity=0.267  Sum_probs=28.8

Q ss_pred             CCCCE-EEEEcC------------------CCchHHHHHHHHHHcCCeEEEEeCC
Q 025273           10 FQGKV-AIVTAS------------------TQGIGFGIAERLGLEGASVVVSSRK   45 (255)
Q Consensus        10 l~~k~-vlItGa------------------~~giG~~~a~~l~~~G~~V~~~~r~   45 (255)
                      ++||+ ||||.|                  ||-.|.++|+.|..+|+.|+++.+.
T Consensus        15 ~~g~k~VLITaG~T~epID~~pVR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          15 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             ccCCcEEEEccCCcCcccCCCCceEeCCCCchHHHHHHHHHHHHcCCEEEEEecC
Confidence            45655 778876                  3567999999999999999998644

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.66  E-value=0.019  Score=39.64  Aligned_cols=111  Identities=13%  Similarity=-0.027  Sum_probs=64.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCc--hhHHHHHHHHHh---cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQ--KNVDEAVVKLKA---RGIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~--~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +|.|+|++|.+|.+++..++.++.  +++++|.+.  +.++....++..   ..........|   .++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHH-----------
Confidence            588999999999999999999985  599998653  334433334432   12233322222   222           


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      +..-|++|..||....    ...+   -.+.++.|..=.-.+.+.+.++- +.+.++.+|
T Consensus        68 ~~~aDiVvitaG~~~~----~g~~---R~dl~~~N~~I~~~i~~~i~~~~-p~~i~ivvt  119 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQ----PGQT---RIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTS  119 (142)
T ss_dssp             GTTCSEEEECCCCCCC----TTCC---HHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECC
T ss_pred             hhhcCEEEEecccccc----cCCc---hhhHHHHHHHHHHHHHHHHHhcC-CCceEEEec
Confidence            2368999999996432    1223   23345555543333333333221 455666665

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=96.66  E-value=0.089  Score=41.35  Aligned_cols=146  Identities=17%  Similarity=0.132  Sum_probs=89.0

Q ss_pred             CCCCEEEEEcC-CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTAS-TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa-~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+|++||=.++ +|+++.+    +++.+.+|+.++.+...++..++.+...+ .++.++..|..+      +.+.....-
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~  213 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEG  213 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTT
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhh
Confidence            57899996664 5555544    34456789999999999998888887765 368888887643      222333333


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      ++.|.+|.++.......    ......       ......+++.+.+.++++|.+++.|-..           ..+..-+
T Consensus       214 ~~fD~Vi~DpP~~~~~~----~~~~~~-------~~~~~~l~~~a~~lLkpGG~Lv~~scs~-----------~~~~~~f  271 (318)
T d1wxxa2         214 ERFDLVVLDPPAFAKGK----KDVERA-------YRAYKEVNLRAIKLLKEGGILATASCSH-----------HMTEPLF  271 (318)
T ss_dssp             CCEEEEEECCCCSCCST----TSHHHH-------HHHHHHHHHHHHHTEEEEEEEEEEECCT-----------TSCHHHH
T ss_pred             cCCCEEEEcCCccccch----HHHHHH-------HHHHHHHHHHHHHHcCCCCEEEEEeCCc-----------ccCHHHH
Confidence            57999999976554221    111111       1223346677778888888777654321           1222334


Q ss_pred             HHHHHHHHHHhCCCeeEEEE
Q 025273          168 LGLTKALAAEMAPDTRVNCV  187 (255)
Q Consensus       168 ~~l~~~la~e~~~~v~v~~v  187 (255)
                      ..++...+.+.+..+++...
T Consensus       272 ~~~v~~a~~~a~~~~~~~~~  291 (318)
T d1wxxa2         272 YAMVAEAAQDAHRLLRVVEK  291 (318)
T ss_dssp             HHHHHHHHHHTTCCEEEEEE
T ss_pred             HHHHHHHHHHcCCCEEEEEe
Confidence            45555555555555666544

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.65  E-value=0.0012  Score=48.34  Aligned_cols=43  Identities=19%  Similarity=0.315  Sum_probs=37.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (255)
                      |+|.|.|+ |-+|..+|..|+..|++|++.+++++.+++..+.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA   47 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence            66889998 88999999999999999999999998877655554

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.62  E-value=0.0021  Score=46.47  Aligned_cols=80  Identities=18%  Similarity=0.196  Sum_probs=53.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHH-HHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQ-QRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~   87 (255)
                      -.|.+|+|.|+ |++|...++.+...|+ +|+++++++++++..++    .+....+   |.++.+ .+++.....  .-
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~----lGa~~~i---~~~~~d~~~~~~~~~~--~~   95 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGATECL---NPKDYDKPIYEVICEK--TN   95 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCSEEE---CGGGCSSCHHHHHHHH--TT
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH----cCCcEEE---cCCCchhHHHHHHHHh--cC
Confidence            35789999986 8999999999999997 59999999988775432    2333332   333222 122222211  12


Q ss_pred             CCCCEEEEcCCC
Q 025273           88 GKIDVVVSNAAA   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                      +.+|.+|-+.|.
T Consensus        96 ~G~d~vid~~g~  107 (174)
T d1p0fa2          96 GGVDYAVECAGR  107 (174)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEEcCCC
Confidence            479999999884

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.54  E-value=0.0053  Score=47.07  Aligned_cols=73  Identities=16%  Similarity=0.201  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .+|++||=.|+++|+   ++..+++.|++|+.+|.++...+..++.....+.+..+++.|+.+      .+     ..++
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~-----~~~~  184 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------AL-----PFGP  184 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HG-----GGCC
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------cc-----cccc
Confidence            568999999999886   334567789999999999999998888777777667777766421      11     1257


Q ss_pred             CCEEEEc
Q 025273           90 IDVVVSN   96 (255)
Q Consensus        90 ~d~lv~~   96 (255)
                      .|.++.|
T Consensus       185 fD~V~an  191 (254)
T d2nxca1         185 FDLLVAN  191 (254)
T ss_dssp             EEEEEEE
T ss_pred             cchhhhc
Confidence            8999876

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.53  E-value=0.0026  Score=45.77  Aligned_cols=79  Identities=11%  Similarity=0.175  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHH-HHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQ-RKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~~~g   88 (255)
                      .|.+|+|.|+ |++|...+.+++..|. +|+++++++++++..+ +   .+....+   |-++++. .++..+..  .-+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~---~GAd~~i---n~~~~~~~~~~~~~~~--~~~   97 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V---FGATDFV---NPNDHSEPISQVLSKM--TNG   97 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCCEEE---CGGGCSSCHHHHHHHH--HTS
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-H---cCCcEEE---cCCCcchhHHHHHHhh--ccC
Confidence            5789999985 7788888888888876 5888999988876543 2   2433332   3332221 22222211  124


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|+++.+.|.
T Consensus        98 G~d~vid~~G~  108 (175)
T d1cdoa2          98 GVDFSLECVGN  108 (175)
T ss_dssp             CBSEEEECSCC
T ss_pred             CcceeeeecCC
Confidence            79999999985

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.51  E-value=0.00062  Score=51.53  Aligned_cols=47  Identities=23%  Similarity=0.384  Sum_probs=40.5

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK   55 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (255)
                      .+|+||+|+|-| .|.+|+.+++.|.+.|++|++++.+....+....+
T Consensus        35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            458999999997 68899999999999999999999988776665544

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.50  E-value=0.014  Score=42.91  Aligned_cols=77  Identities=21%  Similarity=0.196  Sum_probs=59.1

Q ss_pred             cccCCCCEEEEEcCCCc-hHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQG-IGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~g-iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      ..+++|++||=.|+++| ++    ..++..|+ +|++++.++..++.+.+.+...+.+..++..|+.+.           
T Consensus        42 ~~dl~g~~vLDlg~GtG~l~----i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-----------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGVLS----YGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-----------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCHHH----HHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-----------
T ss_pred             cCCCCCCEEEECcCcchHHH----HHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-----------
Confidence            34689999998887665 44    34456786 699999999988888777777778888888887543           


Q ss_pred             HHhCCCCEEEEcCCCC
Q 025273           85 EKFGKIDVVVSNAAAN  100 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~  100 (255)
                        .+++|++|.|.-+.
T Consensus       107 --~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 --NSRVDIVIMNPPFG  120 (201)
T ss_dssp             --CCCCSEEEECCCCS
T ss_pred             --CCcCcEEEEcCccc
Confidence              24899999998753

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.48  E-value=0.0098  Score=39.34  Aligned_cols=72  Identities=13%  Similarity=0.142  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      ....++.|.| +|-+|+-++....+.|+++++.+.+.+....        ...-.++..|..|.+.+.++....     .
T Consensus         9 ~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~--------~va~~~i~~~~~d~~~l~~~~~~~-----~   74 (111)
T d1kjqa2           9 PAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM--------HVAHRSHVINMLDGDALRRVVELE-----K   74 (111)
T ss_dssp             TTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG--------GGSSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             CCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh--------hcCCeEEECCCCCHHHHHHHHHhh-----C
Confidence            3456799998 6789999999999999999999988654221        112245678999999999887755     6


Q ss_pred             CCEEEE
Q 025273           90 IDVVVS   95 (255)
Q Consensus        90 ~d~lv~   95 (255)
                      +|++..
T Consensus        75 ~DviT~   80 (111)
T d1kjqa2          75 PHYIVP   80 (111)
T ss_dssp             CSEEEE
T ss_pred             CceEEE
Confidence            888863

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.47  E-value=0.035  Score=38.27  Aligned_cols=75  Identities=9%  Similarity=-0.083  Sum_probs=49.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +++.|.|+ |.+|.+++..|+.+|.  +++++|++++.++....+++..    .........+  +.++           
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~--d~~~-----------   66 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYSL-----------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES--CGGG-----------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCC--CHHH-----------
Confidence            35778896 9999999999998884  4999999988776655444321    2222222221  1222           


Q ss_pred             hCCCCEEEEcCCCCC
Q 025273           87 FGKIDVVVSNAAANP  101 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~  101 (255)
                      +..-|++|..+|...
T Consensus        67 ~~~adiVvitag~~~   81 (142)
T d1ojua1          67 LKGSEIIVVTAGLAR   81 (142)
T ss_dssp             GTTCSEEEECCCCCC
T ss_pred             hccccEEEEeccccC
Confidence            226899999999643

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.40  E-value=0.0057  Score=43.38  Aligned_cols=83  Identities=17%  Similarity=0.151  Sum_probs=53.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh-------cCCeEEEEEecCCCHHHHHHHH---HHHH
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA-------RGIEVIGVVCHVSNGQQRKNLI---NQTI   84 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~---~~~~   84 (255)
                      |-|.| .|-+|+.+|+.|+++|++|++.+|+++..+.+.+.-..       .-....++.+=+.+.+.+++++   +.+.
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            55554 58999999999999999999999998877765432100       0012233444567788888776   3344


Q ss_pred             HHhCCCCEEEEcCC
Q 025273           85 EKFGKIDVVVSNAA   98 (255)
Q Consensus        85 ~~~g~~d~lv~~ag   98 (255)
                      ....+=+++|.+.-
T Consensus        82 ~~~~~g~iiid~sT   95 (161)
T d1vpda2          82 EGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHCCTTCEEEECSC
T ss_pred             hccCCCCEEEECCC
Confidence            44434456666543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.38  E-value=0.0019  Score=45.88  Aligned_cols=36  Identities=17%  Similarity=-0.002  Sum_probs=32.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV   49 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~   49 (255)
                      ++|+|.|+ |.+|..++..|++.|+.|.+++|+....
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            46889988 9999999999999999999999987643

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.35  E-value=0.0025  Score=46.61  Aligned_cols=95  Identities=21%  Similarity=0.112  Sum_probs=63.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..++++++.|. |.|.||+.+++.+...|.+|+..++.......         ..     ...   ++++++++      
T Consensus        40 ~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---------~~-----~~~---~~l~ell~------   95 (188)
T d1sc6a1          40 FEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENKLPLG---------NA-----TQV---QHLSDLLN------   95 (188)
T ss_dssp             CCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCCCCCT---------TC-----EEC---SCHHHHHH------
T ss_pred             ccccceEEEEe-ecccchhhhhhhcccccceEeeccccccchhh---------hh-----hhh---hhHHHHHh------
Confidence            35889999999 47899999999999999999999987542110         01     111   24555555      


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                       .-|+++.+......  ...-.+                   +.++..|+++..+||+|-.
T Consensus        96 -~sDii~i~~plt~~--T~~li~-------------------~~~l~~mk~~a~lIN~aRG  134 (188)
T d1sc6a1          96 -MSDVVSLHVPENPS--TKNMMG-------------------AKEISLMKPGSLLINASRG  134 (188)
T ss_dssp             -HCSEEEECCCSSTT--TTTCBC-------------------HHHHHHSCTTEEEEECSCS
T ss_pred             -hccceeecccCCcc--hhhhcc-------------------HHHHhhCCCCCEEEEcCcH
Confidence             46998887765432  222222                   3356777888888888743

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.34  E-value=0.0081  Score=45.70  Aligned_cols=81  Identities=15%  Similarity=0.205  Sum_probs=53.5

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCC-------------------chhHHHHHHHHHhcCCeEEEEEe
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRK-------------------QKNVDEAVVKLKARGIEVIGVVC   68 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~   68 (255)
                      .|++++|+|.| .||+|..+++.|++.|.. ++++|.+                   ..+.+.+++.+.+..+.+.+...
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            37789999999 678999999999999975 9998854                   22455666666665444333333


Q ss_pred             cCC-CHHHHHHHHHHHHHHhCCCCEEEEcC
Q 025273           69 HVS-NGQQRKNLINQTIEKFGKIDVVVSNA   97 (255)
Q Consensus        69 Dv~-~~~~v~~~~~~~~~~~g~~d~lv~~a   97 (255)
                      +.. +.+.......       ..|++|.+.
T Consensus       106 ~~~~~~~~~~~~~~-------~~divid~~  128 (247)
T d1jw9b_         106 NALLDDAELAALIA-------EHDLVLDCT  128 (247)
T ss_dssp             CSCCCHHHHHHHHH-------TSSEEEECC
T ss_pred             hhhhhhcccccccc-------ccceeeecc
Confidence            332 2333333322       678888664

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.32  E-value=0.045  Score=42.88  Aligned_cols=117  Identities=10%  Similarity=0.012  Sum_probs=71.1

Q ss_pred             CCCEEEEE-cCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           11 QGKVAIVT-ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        11 ~~k~vlIt-Ga~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++++||=. .++|+++.+    +++.|++|+.++.+...++..++.+..+   ..++.+++.|+.      +++++....
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            57889844 455655554    4567999999999999888877765543   236888887763      334444444


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      ..+.|+||.+.-.+...+. ...  ..++..+.       .+.+.+..++++++.++++++
T Consensus       202 ~~~fD~IilDPP~f~~~~~-~~~--~~~~~~~~-------~l~~~~~~ll~~~g~~ll~t~  252 (309)
T d2igta1         202 GSTYDIILTDPPKFGRGTH-GEV--WQLFDHLP-------LMLDICREILSPKALGLVLTA  252 (309)
T ss_dssp             TCCBSEEEECCCSEEECTT-CCE--EEHHHHHH-------HHHHHHHHTBCTTCCEEEEEE
T ss_pred             CCCCCEEEECCCccccccc-chh--HHHHHHHH-------HHHHHHHHhcCCCCCEEEEec
Confidence            4589999998764432111 111  11122211       244556667777776555554

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.27  E-value=0.029  Score=40.44  Aligned_cols=99  Identities=18%  Similarity=0.279  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +|.+||=.|+++|   .++..|++.+.+|+.++.+++.++..++.+...+  .++.++++|..+          .....+
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccC
Confidence            5788998887766   3345566778899999999999998888887764  589998887421          112235


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      .+|.++.+.....            +.           .+.+.+...++++|+++..
T Consensus       100 ~~D~v~~~~~~~~------------~~-----------~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_         100 DIDIAVVGGSGGE------------LQ-----------EILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             CEEEEEESCCTTC------------HH-----------HHHHHHHHTEEEEEEEEEE
T ss_pred             CcCEEEEeCcccc------------ch-----------HHHHHHHHHhCcCCEEEEE
Confidence            7899987643211            11           2456667788888887754

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=96.24  E-value=0.042  Score=43.31  Aligned_cols=115  Identities=11%  Similarity=0.102  Sum_probs=72.0

Q ss_pred             CCCEEEEEc-CCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTA-STQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARG---IEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        11 ~~k~vlItG-a~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +|++||=.. ++|+++.+    .++.|+ .|+.++.+...++..++.+..++   .++.+++.|+.      +.++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            588999555 55665544    445787 49999999999888877776553   46888888873      33444444


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ...+.|++|..+-.+...+. .-.+.          ......+.+.++++++++|.+++.|
T Consensus       214 ~~~~fD~Ii~DPP~f~~~~~-~~~~~----------~~~~~~L~~~a~~ll~pgG~l~~~s  263 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFARNKK-EVFSV----------SKDYHKLIRQGLEILSENGLIIAST  263 (317)
T ss_dssp             TTCCEEEEEECCCCC------CCCCH----------HHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             hcCCCCEEEEcChhhccchh-HHHHH----------HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence            44589999998765432111 11111          1122346677788888877666544

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.18  E-value=0.014  Score=42.03  Aligned_cols=113  Identities=13%  Similarity=0.144  Sum_probs=70.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH---------------H
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG---------------Q   74 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~---------------~   74 (255)
                      .+.-+|+|.|| |-.|.+.++-....|+.|.++|.+.+.++++.+..    +++.  ..+..+.               +
T Consensus        27 V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~----~~~i--~~~~~~~~~~~~~~gyA~~~s~~   99 (183)
T d1l7da1          27 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLG----GKFI--TVDDEAMKTAETAGGYAKEMGEE   99 (183)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTT----CEEC--CC---------------------
T ss_pred             cCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhh----cceE--EEeccccccccccccchhhcCHH
Confidence            34457888875 57899999999999999999999998877765432    2221  1111111               1


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccC
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIA  149 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~  149 (255)
                      ..+..-+.+.+...+-|++|..+-+.....|                    ..+.+..+..|+++..||-++.-.
T Consensus       100 ~~~~~~~~l~~~l~~aDlVI~talipG~~aP--------------------~lit~~mv~~Mk~GSVIVDvaidq  154 (183)
T d1l7da1         100 FRKKQAEAVLKELVKTDIAITTALIPGKPAP--------------------VLITEEMVTKMKPGSVIIDLAVEA  154 (183)
T ss_dssp             --CCHHHHHHHHHTTCSEEEECCCCTTSCCC--------------------CCSCHHHHTTSCTTCEEEETTGGG
T ss_pred             HHHHHHHHHHHHHHhhhhheeeeecCCcccc--------------------eeehHHHHHhcCCCcEEEEEeecC
Confidence            1111222333444589999999887653322                    223455678888888888777543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.13  E-value=0.025  Score=44.84  Aligned_cols=116  Identities=18%  Similarity=0.186  Sum_probs=75.0

Q ss_pred             CCCEEEEEcC-CCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTAS-TQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        11 ~~k~vlItGa-~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +|++||=.++ +|+++.+    +++.|+ +|+.++.++..++...+.+...+  .++.+++.|+.      +....+...
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            3789996665 4555554    345676 59999999999888887776664  46788777764      223333334


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      ..++|++|.++-.....       ......    -......++..+++.++++|.+++.|.
T Consensus       215 ~~~fD~Vi~DpP~~~~~-------~~~~~~----~~~~y~~l~~~a~~ll~pGG~lv~~s~  264 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQH-------EKDLKA----GLRAYFNVNFAGLNLVKDGGILVTCSC  264 (324)
T ss_dssp             TCCEEEEEECCCCSCSS-------GGGHHH----HHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred             cCCCCchhcCCccccCC-------HHHHHH----HHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            45899999987754421       111111    122344567778888888887777653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.06  E-value=0.0021  Score=47.58  Aligned_cols=39  Identities=21%  Similarity=0.075  Sum_probs=34.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      ..+.||++.|.| .|.||+.+++.|...|++|+..++...
T Consensus        41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeee-cccccccccccccccceeeeccCCccc
Confidence            457899999997 577999999999999999999998754

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.01  E-value=0.0026  Score=52.65  Aligned_cols=35  Identities=20%  Similarity=0.343  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRK   45 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~   45 (255)
                      |++.+|||.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            55678999998 67999999999999984 9999865

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.00  E-value=0.047  Score=38.53  Aligned_cols=84  Identities=11%  Similarity=0.019  Sum_probs=54.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCchhHHHHHHHHHhc----------CCeEEEEEecCCCHHHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQKNVDEAVVKLKAR----------GIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      |+++|.|. |-+|..+++.|.+.|+  +|+..|++.+.++..++.-...          .....++.+- +..+.+.+++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila-~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS-SPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC-SCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc-CCchhhhhhh
Confidence            46888875 9999999999999996  5888999988776654431100          0011112111 2366788888


Q ss_pred             HHHHHHhCCCCEEEEcCC
Q 025273           81 NQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag   98 (255)
                      +++...+..=.+++..++
T Consensus        80 ~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHSCTTCEEEECCS
T ss_pred             hhhhcccccccccccccc
Confidence            888776654445555544

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.00  E-value=0.0052  Score=41.89  Aligned_cols=74  Identities=14%  Similarity=0.140  Sum_probs=55.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEE-EeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVV-SSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +++.|.|++|-+|+++++.+.++|+.++. ++++....      +  ....   +..|+|.++...+.++.+.+.  ++-
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~--~~~D---VvIDFS~p~~~~~~l~~~~~~--~~p   67 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L--DSPD---VVIDFSSPEALPKTVDLCKKY--RAG   67 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C--SCCS---EEEECSCGGGHHHHHHHHHHH--TCE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h--ccCC---EEEEecCHHHHHHHHHHHHhc--CCC
Confidence            35899999999999999999999998554 45553210      0  1122   456999999999999988766  566


Q ss_pred             EEEEcCCC
Q 025273           92 VVVSNAAA   99 (255)
Q Consensus        92 ~lv~~ag~   99 (255)
                      +++-..|+
T Consensus        68 ~ViGTTG~   75 (128)
T d1vm6a3          68 LVLGTTAL   75 (128)
T ss_dssp             EEECCCSC
T ss_pred             EEEEcCCC
Confidence            78866664

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.93  E-value=0.0097  Score=42.23  Aligned_cols=42  Identities=26%  Similarity=0.293  Sum_probs=37.0

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV   49 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~   49 (255)
                      .+++||+++|.|-|.-+|+-++..|.++|++|+++.+....+
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l   74 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL   74 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence            358899999999999999999999999999999887765443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.82  E-value=0.014  Score=40.02  Aligned_cols=76  Identities=13%  Similarity=0.087  Sum_probs=53.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEE-EEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           14 VAIVTASTQGIGFGIAERLGLE-GASVV-VSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~-G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|.|.|++|-+|+++++...+. +++++ .+++.....     .+...+..   +..|+|.++.+.+.++.+.+.  ++-
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~-----~~~~~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~   70 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLS-----LLTDGNTE---VVIDFTHPDVVMGNLEFLIDN--GIH   70 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTH-----HHHTTTCS---EEEECCCTTTHHHHHHHHHHT--TCE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchh-----hhccccCC---EEEEcccHHHHHHHHHHHHhc--CCC
Confidence            5899999999999999988765 67744 456654321     11222333   456999999999999888765  566


Q ss_pred             EEEEcCCC
Q 025273           92 VVVSNAAA   99 (255)
Q Consensus        92 ~lv~~ag~   99 (255)
                      +++-..|+
T Consensus        71 ~ViGTTG~   78 (135)
T d1yl7a1          71 AVVGTTGF   78 (135)
T ss_dssp             EEECCCCC
T ss_pred             EEEecccc
Confidence            77766564

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=95.80  E-value=0.027  Score=43.40  Aligned_cols=78  Identities=21%  Similarity=0.211  Sum_probs=54.9

Q ss_pred             CCEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           12 GKVAIVTASTQG-IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        12 ~k~vlItGa~~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .++++-.|++|| |+.+++ +  ...++|++++.++.+++-.++-....  ..++.+...|+.+...         ..++
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~~---------~~~~  178 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---------EKFA  178 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---------GGTT
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccccc---------cccC
Confidence            356675666655 444443 2  35678999999999988877777665  3578888888864421         2346


Q ss_pred             CCCEEEEcCCCCC
Q 025273           89 KIDVVVSNAAANP  101 (255)
Q Consensus        89 ~~d~lv~~ag~~~  101 (255)
                      ++|++|.|.-+..
T Consensus       179 ~fDlIVsNPPYI~  191 (271)
T d1nv8a_         179 SIEMILSNPPYVK  191 (271)
T ss_dssp             TCCEEEECCCCBC
T ss_pred             cccEEEEcccccC
Confidence            8999999998865

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.05  Score=38.28  Aligned_cols=82  Identities=22%  Similarity=0.266  Sum_probs=54.6

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh----------cCCeEEEEE---ecCCCHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA----------RGIEVIGVV---CHVSNGQ   74 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~---~Dv~~~~   74 (255)
                      ..+.||+++|.| .|-+|+.+|+.|...|++|++++.++..  .+......          ....+++..   -|+-+.+
T Consensus        20 ~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~--al~A~~dG~~v~~~~~a~~~adivvtaTGn~~vI~~e   96 (163)
T d1li4a1          20 VMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPIN--ALQAAMEGYEVTTMDEACQEGNIFVTTTGCIDIILGR   96 (163)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH--HHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCHH
T ss_pred             ceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccch--hHHhhcCceEeeehhhhhhhccEEEecCCCccchhHH
Confidence            347899999997 4589999999999999999999998643  33222211          112222222   1444455


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAANP  101 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      .++.+         +-..++.|+|.+.
T Consensus        97 h~~~M---------KdgaIL~N~Ghfd  114 (163)
T d1li4a1          97 HFEQM---------KDDAIVCNIGHFD  114 (163)
T ss_dssp             HHTTC---------CTTEEEEECSSST
T ss_pred             HHHhc---------cCCeEEEEecccc
Confidence            54433         6788888888765

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.0088  Score=42.72  Aligned_cols=43  Identities=21%  Similarity=0.303  Sum_probs=38.2

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHH
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVD   50 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~   50 (255)
                      .+++||+++|.|-|.-+|+-++..|+++|++|.++.+....+.
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            3589999999999999999999999999999999987765543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.74  E-value=0.0098  Score=41.62  Aligned_cols=41  Identities=10%  Similarity=0.130  Sum_probs=34.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVK   55 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~   55 (255)
                      ++.+.|+ |.+|.++++.|.+.| ++|++.+|+++..+.+.++
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            4667766 999999999999887 8899999998887766554

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.68  E-value=0.0063  Score=44.71  Aligned_cols=73  Identities=25%  Similarity=0.196  Sum_probs=53.4

Q ss_pred             cccCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            7 AKRFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         7 ~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      ..+++||+||=.|+++|+   ++..++..|+. |+.++.+++.++...+.    ..++.++.+|+.+.+           
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N----~~~~~~~~~D~~~l~-----------  105 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN----CGGVNFMVADVSEIS-----------  105 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH----CTTSEEEECCGGGCC-----------
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc----cccccEEEEehhhcC-----------
Confidence            356899999999988773   33456677864 99999998776654433    346778889986432           


Q ss_pred             HhCCCCEEEEcCCC
Q 025273           86 KFGKIDVVVSNAAA   99 (255)
Q Consensus        86 ~~g~~d~lv~~ag~   99 (255)
                        +++|++|.|.-+
T Consensus       106 --~~fD~Vi~NPPf  117 (197)
T d1ne2a_         106 --GKYDTWIMNPPF  117 (197)
T ss_dssp             --CCEEEEEECCCC
T ss_pred             --CcceEEEeCccc
Confidence              489999999765

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.67  E-value=0.012  Score=43.66  Aligned_cols=79  Identities=19%  Similarity=0.135  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|.+||-.|+++|--.++..++......|+.++.+++..+..++.+... -.++.++..|..+...          ..+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~----------~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP----------EFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG----------GGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccc----------cccc
Confidence            4779999998887666655555555668999999999888888877665 3466777767643111          1236


Q ss_pred             CCEEEEcCCC
Q 025273           90 IDVVVSNAAA   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      .|.++.+++.
T Consensus       145 fD~I~~~~~~  154 (213)
T d1dl5a1         145 YDVIFVTVGV  154 (213)
T ss_dssp             EEEEEECSBB
T ss_pred             hhhhhhhccH
Confidence            8999988775

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.66  E-value=0.028  Score=39.20  Aligned_cols=37  Identities=27%  Similarity=0.320  Sum_probs=30.5

Q ss_pred             CCEEEEE-cCCCchHHHHHHHHHHcCCeEEEEeCCchh
Q 025273           12 GKVAIVT-ASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (255)
Q Consensus        12 ~k~vlIt-Ga~~giG~~~a~~l~~~G~~V~~~~r~~~~   48 (255)
                      ++.++|. .+++.||.++|..|+++|++|.++.+...-
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            4555555 467999999999999999999999987643

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.59  E-value=0.098  Score=37.75  Aligned_cols=103  Identities=13%  Similarity=0.145  Sum_probs=69.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR---GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .++++||=.|+++|   .++..+++.+.+|++++.++...+..++.+...   ..++.++..|+.+...           
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~~-----------  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK-----------  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT-----------
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhhc-----------
Confidence            45789998888776   345566778889999999988888777666544   3468999999864211           


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      -+..|.++.+..+..        ..+..           -.+++.+...|+++|.++++
T Consensus       117 ~~~fD~Ii~~~p~~~--------~~~~~-----------~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         117 DRKYNKIITNPPIRA--------GKEVL-----------HRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             TSCEEEEEECCCSTT--------CHHHH-----------HHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCceEEEEcccEEe--------cchhh-----------hhHHHHHHHhcCcCcEEEEE
Confidence            127899998865421        11111           12456666778888877654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.52  E-value=0.0079  Score=40.83  Aligned_cols=69  Identities=10%  Similarity=0.067  Sum_probs=48.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      |.++|.|. |.+|+.+++.|.  |..|++++.+++..+...    ..  .+.++..|.++++.++++      ...+-+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~~--~~~~i~Gd~~~~~~L~~a------~i~~A~~   65 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL----RS--GANFVHGDPTRVSDLEKA------NVRGARA   65 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----HT--TCEEEESCTTSHHHHHHT------TCTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----hc--CccccccccCCHHHHHHh------hhhcCcE
Confidence            46788875 778999999994  567888888887655432    22  456677999998887764      1235677


Q ss_pred             EEEc
Q 025273           93 VVSN   96 (255)
Q Consensus        93 lv~~   96 (255)
                      +|.+
T Consensus        66 vi~~   69 (129)
T d2fy8a1          66 VIVN   69 (129)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            7754

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.37  E-value=0.027  Score=39.27  Aligned_cols=41  Identities=12%  Similarity=0.124  Sum_probs=34.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHH
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (255)
                      +.|. |.|-+|.++++.|.+.|++|++.+|+.++.+.+.++.
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            4444 6789999999999999999999999988877766655

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.30  E-value=0.056  Score=38.48  Aligned_cols=78  Identities=19%  Similarity=0.186  Sum_probs=51.8

Q ss_pred             CCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC------------------CeEEEEEecCCCHHHHHHHHH
Q 025273           20 STQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG------------------IEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus        20 a~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------------~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      |.|-+|..+++.|++.|++|++.+|++++.+.+.++-....                  .....+..-+.....++..+.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE   87 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence            57899999999999999999999999998887766532110                  111222333445556666666


Q ss_pred             HHHHHhCCCCEEEEcC
Q 025273           82 QTIEKFGKIDVVVSNA   97 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~a   97 (255)
                      .....+..=+++++..
T Consensus        88 ~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          88 QLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHCCTTCEEEECC
T ss_pred             hhhhhccccceecccC
Confidence            6655554445666543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.14  E-value=0.063  Score=35.36  Aligned_cols=35  Identities=17%  Similarity=0.182  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478888875 78999999999999999999988764

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=95.10  E-value=0.043  Score=40.95  Aligned_cols=75  Identities=19%  Similarity=0.043  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      .|.+||-.|+++|--   +..|++.+.+|+.++++++..+...+.+. ...++.++..|..+--          ...++.
T Consensus        70 ~g~~VLdIG~GsGy~---ta~La~l~~~V~aiE~~~~~~~~A~~~~~-~~~nv~~~~~d~~~g~----------~~~~pf  135 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYY---TALIAEIVDKVVSVEINEKMYNYASKLLS-YYNNIKLILGDGTLGY----------EEEKPY  135 (224)
T ss_dssp             TTCEEEEECCTTSHH---HHHHHHHSSEEEEEESCHHHHHHHHHHHT-TCSSEEEEESCGGGCC----------GGGCCE
T ss_pred             ccceEEEecCCCCHH---HHHHHHHhcccccccccHHHHHHHHHHHh-cccccccccCchhhcc----------hhhhhH
Confidence            467899999888843   34566667899999999887776655443 3468888888875311          112478


Q ss_pred             CEEEEcCCC
Q 025273           91 DVVVSNAAA   99 (255)
Q Consensus        91 d~lv~~ag~   99 (255)
                      |.++.+++.
T Consensus       136 D~Iiv~~a~  144 (224)
T d1vbfa_         136 DRVVVWATA  144 (224)
T ss_dssp             EEEEESSBB
T ss_pred             HHHHhhcch
Confidence            999988775

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.98  E-value=0.013  Score=42.76  Aligned_cols=41  Identities=22%  Similarity=0.154  Sum_probs=33.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVV   54 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~   54 (255)
                      +++.|.|+ |..|.+++..|++.|++|.+.+|+++..+.+.+
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            35888875 558999999999999999999999876665543

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.94  E-value=0.027  Score=42.10  Aligned_cols=80  Identities=23%  Similarity=0.132  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      +|.+||-.|+++|--.++.-++.....+|+.++++++-++...+.+...      ...+.+...|..+...         
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~---------  146 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA---------  146 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG---------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccc---------
Confidence            4679999999999888877777777789999999998888776666542      2467777777642111         


Q ss_pred             HHhCCCCEEEEcCCCC
Q 025273           85 EKFGKIDVVVSNAAAN  100 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~  100 (255)
                       ..+..|.++.+++..
T Consensus       147 -~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         147 -EEAPYDAIHVGAAAP  161 (224)
T ss_dssp             -GGCCEEEEEECSBBS
T ss_pred             -hhhhhhhhhhhcchh
Confidence             123789999887753

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.94  E-value=0.029  Score=41.64  Aligned_cols=78  Identities=19%  Similarity=0.172  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +|.+||..|+++|--.++.-+|.  |..|+.+.++++-.+...+.+...+ .++.++..|..+-.          ...++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------cccCc
Confidence            46789999999888888777776  5679999999887777777776664 68999999986421          11247


Q ss_pred             CCEEEEcCCCC
Q 025273           90 IDVVVSNAAAN  100 (255)
Q Consensus        90 ~d~lv~~ag~~  100 (255)
                      .|.++.+++..
T Consensus       146 fD~Iiv~~a~~  156 (215)
T d1jg1a_         146 YDVIIVTAGAP  156 (215)
T ss_dssp             EEEEEECSBBS
T ss_pred             ceeEEeecccc
Confidence            89999887764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.83  E-value=0.045  Score=38.48  Aligned_cols=84  Identities=15%  Similarity=0.046  Sum_probs=52.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHH-------hcCCeEEEEEecCCCHHHHHHHHHH---H
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLK-------ARGIEVIGVVCHVSNGQQRKNLINQ---T   83 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~~---~   83 (255)
                      +|-|. |.|-+|+++|+.|+++|+.|.+.+|+.+..+.+.+.-.       +.-....++..-+.+.+.++.++..   +
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            45555 56899999999999999999999999887665543211       0011223344456667777776543   3


Q ss_pred             HHHhCCCCEEEEcCC
Q 025273           84 IEKFGKIDVVVSNAA   98 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag   98 (255)
                      .....+=+++|.+.-
T Consensus        82 ~~~l~~g~iiid~st   96 (162)
T d3cuma2          82 LAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHSCTTCEEEECSC
T ss_pred             cccCCCCCEEEECCC
Confidence            333333356665544

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.83  E-value=0.059  Score=35.92  Aligned_cols=35  Identities=17%  Similarity=0.169  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      .|+++|.|| |-||.++|..|++.|.+|.++.+.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            478888874 78999999999999999999988753

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=94.80  E-value=0.22  Score=32.72  Aligned_cols=81  Identities=12%  Similarity=0.168  Sum_probs=55.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      ||+|||.=-...+-..+...|.+.|++|+....+...   ..+.+......+.++-.++-+... -++++++++..+.+-
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~---al~~~~~~~~dliilD~~mp~~~G-~e~~~~ir~~~~~~p   76 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGRE---AVEKYKELKPDIVTMDITMPEMNG-IDAIKEIMKIDPNAK   76 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHHCCSEEEEECSCGGGCH-HHHHHHHHHHCTTCC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHH---HHHHHHhccCCEEEEecCCCCCCH-HHHHHHHHHhCCCCc
Confidence            7899999999999999999999999998866555432   233333444555555444444444 456777777777777


Q ss_pred             EEEEc
Q 025273           92 VVVSN   96 (255)
Q Consensus        92 ~lv~~   96 (255)
                      +++..
T Consensus        77 vi~ls   81 (118)
T d1u0sy_          77 IIVCS   81 (118)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            77665

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.70  E-value=0.026  Score=40.26  Aligned_cols=38  Identities=29%  Similarity=0.365  Sum_probs=35.1

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      +++||.++|.|-|.=+|+=++..|+++|++|..+..+.
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~   63 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN   63 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence            69999999999999999999999999999999887653

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.65  E-value=0.02  Score=44.47  Aligned_cols=37  Identities=24%  Similarity=0.226  Sum_probs=32.5

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS   43 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~   43 (255)
                      +..+|+||+|+|-|- |.+|+++++.|.+.|++|+.++
T Consensus        30 l~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          30 MTPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CCSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            445799999999985 7999999999999999988764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.62  E-value=0.072  Score=41.64  Aligned_cols=74  Identities=18%  Similarity=0.209  Sum_probs=52.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .++||+||-.|++.|+   ++..++++|+ +|++++.++.. ...++.....  ..++.++..|+.+...-         
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~~---------   99 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHLP---------   99 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCCS---------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcCc---------
Confidence            3689999999998885   5667788897 59999988754 3344444333  46889999988764320         


Q ss_pred             HhCCCCEEEEc
Q 025273           86 KFGKIDVVVSN   96 (255)
Q Consensus        86 ~~g~~d~lv~~   96 (255)
                       ..++|+++..
T Consensus       100 -~~~~D~Ivse  109 (311)
T d2fyta1         100 -VEKVDVIISE  109 (311)
T ss_dssp             -CSCEEEEEEC
T ss_pred             -cccceEEEEe
Confidence             1378999875

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.62  E-value=0.37  Score=33.79  Aligned_cols=78  Identities=9%  Similarity=0.055  Sum_probs=42.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHc-----CCeEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLE-----GASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~-----G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      ..++.|.||++.....+...++..     +-.|+++|.++++++...+.+...    +........  ++.   ++.   
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~---~ea---   74 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP---EEA---   74 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH---HHH---
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CCh---hhc---
Confidence            345777787654333333444432     236999999998877544443321    222222211  122   122   


Q ss_pred             HHHHhCCCCEEEEcCCCCC
Q 025273           83 TIEKFGKIDVVVSNAAANP  101 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~  101 (255)
                          +..-|++|+.+|...
T Consensus        75 ----l~~AD~Vvitag~~~   89 (167)
T d1u8xx1          75 ----FTDVDFVMAHIRVGK   89 (167)
T ss_dssp             ----HSSCSEEEECCCTTH
T ss_pred             ----cCCCCEEEECCCcCC
Confidence                237899999999743

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.55  E-value=0.1  Score=34.60  Aligned_cols=35  Identities=14%  Similarity=0.229  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      +++++|.| +|.+|.++|..|+++|.+|.++.+...
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            57888876 579999999999999999999998864

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.50  E-value=0.16  Score=35.09  Aligned_cols=52  Identities=17%  Similarity=0.054  Sum_probs=36.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHHHhcCCeEEE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIG   65 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~   65 (255)
                      |++.|.|+||.||.....-+.+.  .++|+.+.-+.+ .+.+.+++.+..++..+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N-~~~L~~q~~~f~pk~v~   55 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN-VTRMVEQCLEFSPRYAV   55 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC-HHHHHHHHHHHCCSEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc-HHHHHHHHHHHhhcccc
Confidence            57999999999999999988876  467766543322 24455555555556554

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.41  E-value=0.085  Score=38.76  Aligned_cols=103  Identities=15%  Similarity=0.216  Sum_probs=64.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      |.+||=.|+++|.-......+...| +|+.++.++..++.+.+..... ..+.++..|..+.+.....+       ..+|
T Consensus        57 g~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~~-------~~vd  127 (209)
T d1nt2a_          57 DERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-------EKVD  127 (209)
T ss_dssp             SCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-------CCEE
T ss_pred             CCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCcccccccc-------ceEE
Confidence            7899999988774322222222344 8999999999888877666543 57888888988766533222       2567


Q ss_pred             EEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           92 VVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      ++++......           +           .-.+++.+...++++|.++..
T Consensus       128 ~v~~~~~~~~-----------~-----------~~~~l~~~~~~LkpgG~l~i~  159 (209)
T d1nt2a_         128 LIYQDIAQKN-----------Q-----------IEILKANAEFFLKEKGEVVIM  159 (209)
T ss_dssp             EEEECCCSTT-----------H-----------HHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEecccChh-----------h-----------HHHHHHHHHHHhccCCeEEEE
Confidence            7766533211           0           012445556677888877654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.32  E-value=0.1  Score=34.71  Aligned_cols=37  Identities=22%  Similarity=0.208  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      .++|+++|.| +|.+|.++|..|++.|.+|.++.+.+.
T Consensus        28 ~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          28 PEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            3567888885 579999999999999999999988753

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.31  E-value=0.09  Score=34.70  Aligned_cols=34  Identities=15%  Similarity=0.088  Sum_probs=29.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478888874 7899999999999999999999875

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=94.30  E-value=0.088  Score=40.38  Aligned_cols=103  Identities=11%  Similarity=-0.021  Sum_probs=68.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++.+||=.|++.|.   ++..|+++ |++|+.++-++..++...+.....  ..++.++.+|..+..- .         -
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~-~---------~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC-E---------D  133 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS-C---------T
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccc-c---------c
Confidence            47899999987662   44555554 889999999988877766665544  4589999999876421 0         1


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      +.+|+++..-.... .     .++              -.+++.+.+.|+++|++++..
T Consensus       134 ~sfD~V~~~~~l~h-~-----~d~--------------~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         134 NSYDFIWSQDAFLH-S-----PDK--------------LKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             TCEEEEEEESCGGG-C-----SCH--------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccchhhccchhhh-c-----cCH--------------HHHHHHHHHhcCCCcEEEEEE
Confidence            37899886644322 1     111              124566777888888877654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=94.30  E-value=0.026  Score=42.68  Aligned_cols=35  Identities=26%  Similarity=0.269  Sum_probs=31.3

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSS   43 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~   43 (255)
                      .+|+||+|+|-| .|.+|+++++.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            368999999997 89999999999999999987654

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=94.30  E-value=0.053  Score=40.96  Aligned_cols=107  Identities=15%  Similarity=0.176  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++||=.|++.|   ..+..+++.|. +|+.+|.+++.++.+++.....  ..++.++++|.....-         ...
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~   91 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLG   91 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCS
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------ccc
Confidence            5789999998766   23456667775 6999999999988877766544  4579999999854321         001


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      +..|+++++-+.-..     -.+.+++.           .+++.+.+.|+++|.++..
T Consensus        92 ~~fD~V~~~~~l~~~-----~~~~~~~~-----------~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          92 KEFDVISSQFSFHYA-----FSTSESLD-----------IAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             SCEEEEEEESCGGGG-----GSSHHHHH-----------HHHHHHHHTEEEEEEEEEE
T ss_pred             ccceEEEEcceeeec-----CCCHHHHH-----------HHHHHHhceeCCCCEEEEE
Confidence            368998876543210     01233222           2455667788888887764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.28  E-value=0.086  Score=35.21  Aligned_cols=34  Identities=15%  Similarity=0.165  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      .|+++|.||+ .||.++|..|++.|.+|.++.|..
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            4789999864 799999999999999999999874

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=94.26  E-value=0.024  Score=43.24  Aligned_cols=34  Identities=24%  Similarity=0.381  Sum_probs=30.8

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVS   42 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~   42 (255)
                      .+++|++|+|.| .|.+|+.+++.|.+.|++|+.+
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvav   65 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTL   65 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEE
Confidence            358999999998 7999999999999999997765

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=94.07  E-value=0.048  Score=42.04  Aligned_cols=102  Identities=14%  Similarity=0.060  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH---cCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGL---EGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ++++||=.|++.|   .++..|++   .|++|+.+|.++..++...+.....+.++.+...|+.+.+-           .
T Consensus        27 ~~~~ILDiGcG~G---~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~~-----------~   92 (281)
T d2gh1a1          27 KPVHIVDYGCGYG---YLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL-----------N   92 (281)
T ss_dssp             SCCEEEEETCTTT---HHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-----------S
T ss_pred             CcCEEEEecCcCC---HHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccccc-----------c
Confidence            5678999997766   33344443   57889999999998888888777767789999999875421           1


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ++.|+++.+..... .     .++              ..+++.+.+.++++|.++.+-
T Consensus        93 ~~fD~v~~~~~l~~-~-----~d~--------------~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          93 DKYDIAICHAFLLH-M-----TTP--------------ETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             SCEEEEEEESCGGG-C-----SSH--------------HHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCceEEEEehhhhc-C-----CCH--------------HHHHHHHHHHcCcCcEEEEEE
Confidence            26899887754322 1     111              224566778888888877654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.05  E-value=0.02  Score=41.25  Aligned_cols=43  Identities=14%  Similarity=0.190  Sum_probs=32.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA   58 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   58 (255)
                      ++|.|.|+ |..|.++|..|++.|.+|.+.+|..+.  ...+.+..
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            35777775 889999999999999999999986553  33444443

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.90  E-value=0.11  Score=34.11  Aligned_cols=35  Identities=14%  Similarity=0.046  Sum_probs=30.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      .|+++|.| +|.+|.++|..|++.|.+|.++.|.+.
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence            46788776 578999999999999999999998754

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.84  E-value=0.11  Score=39.98  Aligned_cols=112  Identities=16%  Similarity=0.073  Sum_probs=66.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCC-----eEEEEEecCCCHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-----EVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .+++||=.|++.|.   ++..|+++|++|+.+|.+++.++.+++.......     ...+..+|....+.  .+     .
T Consensus        56 ~~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~  125 (292)
T d1xvaa_          56 GCHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK--DV-----P  125 (292)
T ss_dssp             TCCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH--HS-----C
T ss_pred             CCCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhcccccccceeeeeecccccccc--cc-----C
Confidence            36789999988775   4667788999999999999988877666654432     22333344332221  00     0


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEE
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVL  144 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~  144 (255)
                      ..+..|.+++......... ....+.++.           ..+++.+...|+++|.+++
T Consensus       126 ~~~~fd~v~~~~~~~~~~~-~~~~~~~~~-----------~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         126 AGDGFDAVICLGNSFAHLP-DSKGDQSEH-----------RLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             CTTCEEEEEECSSCGGGSC-CTTSSSHHH-----------HHHHHHHHHTEEEEEEEEE
T ss_pred             CCCCceEEEEecCchhhcC-CcccChHHH-----------HHHHHHHHHHcCcCcEEEE
Confidence            0125788876543321111 011122222           2356777888998888776

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=93.82  E-value=0.098  Score=39.59  Aligned_cols=98  Identities=17%  Similarity=0.132  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQG-IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .|.+||=.|+++| +..++++.+.. +.+|+.++++++.++.+++.+...  ..++.+...|+.+...           -
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~~-----------~  152 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS-----------D  152 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC-----------S
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecccc-----------c
Confidence            3789999997766 45555555433 358999999999999888888764  4688999999875311           1


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      ..+|.++.+..     .+                    +.+++.+.+.|+++|+++..
T Consensus       153 ~~fD~V~ld~p-----~p--------------------~~~l~~~~~~LKpGG~lv~~  185 (250)
T d1yb2a1         153 QMYDAVIADIP-----DP--------------------WNHVQKIASMMKPGSVATFY  185 (250)
T ss_dssp             CCEEEEEECCS-----CG--------------------GGSHHHHHHTEEEEEEEEEE
T ss_pred             ceeeeeeecCC-----ch--------------------HHHHHHHHHhcCCCceEEEE
Confidence            36898886532     11                    12456667788888888764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.78  E-value=0.11  Score=34.81  Aligned_cols=77  Identities=12%  Similarity=0.064  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCCc----------hHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 025273           11 QGKVAIVTASTQG----------IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus        11 ~~k~vlItGa~~g----------iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      ..|+|||.|++.-          -+.+.++.|.+.|++++++..|++......    +...++.+-+   -..+.+.+.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~----d~aD~lYfeP---lt~e~v~~Ii   78 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP----EMADATYIEP---IHWEVVRKII   78 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG----GGSSEEECSC---CCHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh----hhcceeeeec---CCHHHHHHHH
Confidence            4588999998532          267888999999999999999987643211    1134555533   3466777666


Q ss_pred             HHHHHHhCCCCEEEEcCCC
Q 025273           81 NQTIEKFGKIDVVVSNAAA   99 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~   99 (255)
                      ++=     ++|.++-..|.
T Consensus        79 ~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          79 EKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHH-----CCSEEECSSSH
T ss_pred             HHh-----CcCCeEEEeee
Confidence            642     89999876663

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.75  E-value=0.26  Score=33.90  Aligned_cols=77  Identities=13%  Similarity=0.142  Sum_probs=53.6

Q ss_pred             cCCCCEEEEEcC-CCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            9 RFQGKVAIVTAS-TQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         9 ~l~~k~vlItGa-~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      .++|++||=.|+ +|.+|.+    .+.+|+ +|+.++.+++..+.+++.+...  ..++.+++.|..+      +++   
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence            478999996665 5556553    456786 5999999999888877777655  3578888888532      222   


Q ss_pred             HHhCCCCEEEEcCC
Q 025273           85 EKFGKIDVVVSNAA   98 (255)
Q Consensus        85 ~~~g~~d~lv~~ag   98 (255)
                      ...++.|+++.++-
T Consensus        79 ~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HBCSCEEEEEECCS
T ss_pred             ccccccceeEechh
Confidence            22357899987754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.64  E-value=0.12  Score=34.18  Aligned_cols=35  Identities=26%  Similarity=0.244  Sum_probs=29.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      +|.++|.| +|.+|.++|..|++.|.+|.++.|.+.
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            46777776 579999999999999999999988753

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.63  E-value=0.17  Score=33.32  Aligned_cols=35  Identities=23%  Similarity=0.134  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      .+.++|.| +|-||.++|..|++.|.+|.++.+...
T Consensus        22 p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence            57888887 479999999999999999999987753

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.61  E-value=0.22  Score=35.81  Aligned_cols=105  Identities=10%  Similarity=0.098  Sum_probs=70.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +++.+||=.|++.|  + .+..|+++|++|+.++.++..++..++.....+ ..+.+...|+.+..- +          +
T Consensus        29 ~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-~----------~   94 (198)
T d2i6ga1          29 VAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-D----------G   94 (198)
T ss_dssp             SCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-C----------C
T ss_pred             CCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-c----------c
Confidence            45678999998655  3 567888999999999999998888777666554 357777888765431 0          3


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ..|.++.+.-...       .+++++.+           +++.+...++++|.+++..
T Consensus        95 ~fD~I~~~~~~~~-------~~~~~~~~-----------~l~~~~~~L~pgG~~~~~~  134 (198)
T d2i6ga1          95 EYDFILSTVVMMF-------LEAQTIPG-----------LIANMQRCTKPGGYNLIVA  134 (198)
T ss_dssp             CEEEEEEESCGGG-------SCTTHHHH-----------HHHHHHHTEEEEEEEEEEE
T ss_pred             cccEEEEeeeeec-------CCHHHHHH-----------HHHHHHHHcCCCcEEEEEE
Confidence            6898886543321       22222222           4555667778888777654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.61  E-value=0.38  Score=32.63  Aligned_cols=87  Identities=14%  Similarity=-0.017  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCC---CchHHHHHHHHHHcCCeEEEEeCCchhHHH--HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTAST---QGIGFGIAERLGLEGASVVVSSRKQKNVDE--AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        11 ~~k~vlItGa~---~giG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      +.|.+.|.|+|   +..|..+.+.|.+.|++|+.+..+......  ....+.+....+..+.. ....+.+.++++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHH
Confidence            46899999998   679999999999999999999765432211  11112222222222111 2457778888888876


Q ss_pred             HhCCCCEEEEcCCCC
Q 025273           86 KFGKIDVVVSNAAAN  100 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~  100 (255)
                      .  .+..++...|..
T Consensus        97 ~--g~k~v~~~~G~~  109 (139)
T d2d59a1          97 K--GAKVVWFQYNTY  109 (139)
T ss_dssp             H--TCSEEEECTTCC
T ss_pred             h--CCCEEEEecccc
Confidence            5  477888777753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.46  E-value=0.18  Score=33.44  Aligned_cols=33  Identities=21%  Similarity=0.147  Sum_probs=28.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK   45 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~   45 (255)
                      .++++|.| +|-||.++|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            46677776 5789999999999999999999876

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.34  E-value=0.063  Score=40.03  Aligned_cols=34  Identities=32%  Similarity=0.291  Sum_probs=29.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      -|+|+|.|| |-.|..+|..|+++|++|.+++|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            467888875 6779999999999999999999864

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.33  E-value=0.033  Score=42.60  Aligned_cols=34  Identities=24%  Similarity=0.258  Sum_probs=28.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      +|+|+|.||+ --|..+|.+|+++|++|+++.++.
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5889999764 458999999999999999998753

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.22  E-value=0.18  Score=32.96  Aligned_cols=35  Identities=20%  Similarity=0.232  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      .|+++|.| +|.+|.++|..|++.|.+|.++.+.+.
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            47777775 589999999999999999999988743

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.18  E-value=0.065  Score=40.20  Aligned_cols=35  Identities=20%  Similarity=0.073  Sum_probs=29.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEe
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGL-EGASVVVSS   43 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~-~G~~V~~~~   43 (255)
                      .+++|++++|-| .|.+|+.+++.|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            368999999996 89999999999975 599987664

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.18  E-value=0.59  Score=35.92  Aligned_cols=107  Identities=8%  Similarity=-0.078  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCC-CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .|.+||=.|++ |++...+++   +.|++|+.++.+.+..+...+.....  ..++.+...|....             -
T Consensus        61 ~G~~VLDiGCG~G~~~~~~a~---~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~~~-------------~  124 (291)
T d1kpia_          61 PGMTLLDIGCGWGSTMRHAVA---EYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-------------D  124 (291)
T ss_dssp             TTCEEEEETCTTSHHHHHHHH---HHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-------------C
T ss_pred             CCCEEEEecCcchHHHHHHHH---hcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhccccc-------------c
Confidence            47899999987 554443333   34999999999998877777766654  34666655654211             1


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEE
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVL  144 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~  144 (255)
                      ++.|.++..-............-.+.+.           .+.+.+...|+++|+++.
T Consensus       125 ~~fD~i~sie~~eH~~~~~~~~~~~~~~-----------~~f~~i~~~LkpgG~~~l  170 (291)
T d1kpia_         125 EPVDRIVSLGAFEHFADGAGDAGFERYD-----------TFFKKFYNLTPDDGRMLL  170 (291)
T ss_dssp             CCCSEEEEESCGGGTTCCSSCCSTTHHH-----------HHHHHHHHTSCTTCEEEE
T ss_pred             cccceEeechhHHhcchhhhhhHHHHHH-----------HHHHHHHHhCCCCCceEE
Confidence            4789988775543211111111112222           245556678888888775

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.09  E-value=0.36  Score=36.94  Aligned_cols=102  Identities=11%  Similarity=0.003  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .|.+||=.|++-|   .++..++++ |++|+.++.+++..+..++.+.+.+  .++.+...|..+.+             
T Consensus        52 ~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~~~~-------------  115 (280)
T d2fk8a1          52 PGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-------------  115 (280)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-------------
T ss_pred             CCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhhhhc-------------
Confidence            3789999998865   244556654 9999999999998888777776653  45666555644321             


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ++.|.++..-....       +..+.+.           .+.+.+...|+++|+++.-.
T Consensus       116 ~~fD~i~si~~~eh-------~~~~~~~-----------~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         116 EPVDRIVSIEAFEH-------FGHENYD-----------DFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             CCCSEEEEESCGGG-------TCGGGHH-----------HHHHHHHHHSCTTCEEEEEE
T ss_pred             cchhhhhHhhHHHH-------hhhhhHH-----------HHHHHHHhccCCCceEEEEE
Confidence            37898886644322       1111111           23455667788889887744

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.08  E-value=0.08  Score=38.58  Aligned_cols=38  Identities=16%  Similarity=0.077  Sum_probs=31.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   52 (255)
                      ++.|. |.|-+|..+|..|+++|++|++.|.+.+..+.+
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            35566 678999999999999999999999997665544

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=93.06  E-value=0.21  Score=36.59  Aligned_cols=102  Identities=16%  Similarity=0.092  Sum_probs=71.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFGKI   90 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   90 (255)
                      +++||=.|++.|.-   +..|+++|.+|+.++.+++.++..++.+... ..++.+++.|..+.+ ..         -+..
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~~---------~~~f   82 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-FT---------DERF   82 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SC---------TTCE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-cc---------cccc
Confidence            58999999888743   4667888999999999998888777766555 467899999987642 00         1378


Q ss_pred             CEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           91 DVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      |+++........      .++              ..+++.+.+.|+++|++++..
T Consensus        83 D~v~~~~~l~~~------~d~--------------~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          83 HIVTCRIAAHHF------PNP--------------ASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             EEEEEESCGGGC------SCH--------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccc------CCH--------------HHHHHHHHHhcCCCcEEEEEe
Confidence            998877654221      111              124556677888888888753

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.04  E-value=0.096  Score=36.18  Aligned_cols=39  Identities=18%  Similarity=0.078  Sum_probs=31.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV   53 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   53 (255)
                      ++-|. |.|-+|+++++.|+++|+.|+..+++........
T Consensus         2 kIgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred             EEEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence            34555 4599999999999999999999988876655443

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.01  E-value=0.14  Score=35.37  Aligned_cols=55  Identities=13%  Similarity=0.143  Sum_probs=38.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHHHhcCCeEEEEE
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKARGIEVIGVV   67 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   67 (255)
                      .|++.|.|+||.||.....-+.+.  .++|+.+.-+.+ .+.+.+++.+..++..++.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N-~~~L~~q~~ef~Pk~v~i~   58 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRN-VKDLADAAKRTNAKRAVIA   58 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSC-HHHHHHHHHHTTCSEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCC-HHHHHHHHHhhccccceec
Confidence            589999999999999999988775  577776543332 2455566666666665543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.89  E-value=0.3  Score=31.92  Aligned_cols=37  Identities=14%  Similarity=0.139  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      ..+|.++|.| +|-+|..+|..|++.|.+|.++.|.+.
T Consensus        20 ~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            3578888886 578999999999999999999998754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.69  E-value=0.18  Score=33.44  Aligned_cols=35  Identities=23%  Similarity=0.253  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      .|.++|.| +|-||.++|..|.+.|.+|.++.|.+.
T Consensus        25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            57888887 479999999999999999999988754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.54  E-value=0.087  Score=37.71  Aligned_cols=38  Identities=18%  Similarity=0.183  Sum_probs=32.4

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      ..++|+|+|.|| |--|.+.|..|+++|++|+++.++..
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            356799999986 56699999999999999999998753

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.40  E-value=0.28  Score=38.21  Aligned_cols=74  Identities=26%  Similarity=0.246  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+||+||-.|++.|+   ++..++++|+ +|+.++.++. .....+.....  ..++.++..|+.+.+.          .
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------P   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------S
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------c
Confidence            579999999998875   5567778886 4999998754 34444444433  4679999988876431          1


Q ss_pred             hCCCCEEEEcC
Q 025273           87 FGKIDVVVSNA   97 (255)
Q Consensus        87 ~g~~d~lv~~a   97 (255)
                      ..++|+++...
T Consensus        98 ~~~~D~ivs~~  108 (316)
T d1oria_          98 VEKVDIIISEW  108 (316)
T ss_dssp             SSCEEEEEECC
T ss_pred             cceeEEEeeee
Confidence            13789988753

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.20  E-value=0.071  Score=38.12  Aligned_cols=35  Identities=11%  Similarity=0.088  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCCch
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRKQK   47 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~   47 (255)
                      +|+|+|.|| |-.|..+|..|+++|++ |+++.|+..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            688899975 67899999999999995 989988753

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=92.12  E-value=0.76  Score=32.11  Aligned_cols=80  Identities=10%  Similarity=0.086  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcC-CCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           10 FQGKVAIVTAS-TQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        10 l~~k~vlItGa-~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+|++||=.|+ +|.+|.    +++.+|++|+.++.++...+.+++.+...+....+...|   .+.   +.........
T Consensus        40 ~~g~~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~---~d~---~~~~~~~~~~  109 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALP---VEV---FLPEAKAQGE  109 (171)
T ss_dssp             TTCCEEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSC---HHH---HHHHHHHTTC
T ss_pred             cCCCeEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeee---hhc---ccccccccCC
Confidence            36788885554 455443    456689999999999999888877776654332322222   221   2222223335


Q ss_pred             CCCEEEEcCCC
Q 025273           89 KIDVVVSNAAA   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      +.|+++.++-+
T Consensus       110 ~fD~If~DPPY  120 (171)
T d1ws6a1         110 RFTVAFMAPPY  120 (171)
T ss_dssp             CEEEEEECCCT
T ss_pred             ccceeEEcccc
Confidence            78999988643

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=91.89  E-value=0.29  Score=34.89  Aligned_cols=108  Identities=16%  Similarity=0.121  Sum_probs=63.9

Q ss_pred             cCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEcCC
Q 025273           19 ASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        19 Ga~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      =||-|-|.+ .+.+++++.+|+++||+++..+...+.   ...++.+++.+.++.++   .+...  ..+.+|.++..-|
T Consensus        24 D~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~---~~~~~~~~~~~f~~~~~---~l~~~--~~~~vdgIl~DLG   94 (182)
T d1wg8a2          24 DATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGL---HLPGLTVVQGNFRHLKR---HLAAL--GVERVDGILADLG   94 (182)
T ss_dssp             ETTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHT---CCTTEEEEESCGGGHHH---HHHHT--TCSCEEEEEEECS
T ss_pred             EeCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhc---cccceeEeehHHHHHHH---HHHHc--CCCccCEEEEEcc
Confidence            355555556 455566777999999999887665432   34688888888876444   33222  1257999999988


Q ss_pred             CCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           99 ANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      +... + +.+. ..++..        .-..+......++++|+++.++
T Consensus        95 vSs~-q-ld~~-~re~~~--------~~~~L~~~~~~lk~gg~~~ii~  131 (182)
T d1wg8a2          95 VSSF-H-LDDP-SDELNA--------LKEFLEQAAEVLAPGGRLVVIA  131 (182)
T ss_dssp             CCHH-H-HHCG-GTHHHH--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCHH-H-hhcc-hHHHHH--------HHHHHHHHHhhhCCCCeEEEEe
Confidence            7541 1 1111 111211        1112333445567788888776

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.71  E-value=0.61  Score=29.30  Aligned_cols=71  Identities=25%  Similarity=0.212  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCCchH-HHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIG-FGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG-~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +.|++.+.|-+ |+| +++|+.|+++|+.|...|+...+.-   +.+.+.+.++..  .+-  ++.+           .+
T Consensus         7 ~~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~Gi~v~~--g~~--~~~i-----------~~   67 (96)
T d1p3da1           7 RVQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQAGAKIYI--GHA--EEHI-----------EG   67 (96)
T ss_dssp             TCCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHTTCEEEE--SCC--GGGG-----------TT
T ss_pred             hCCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHCCCeEEE--CCc--cccC-----------CC
Confidence            35788888853 333 6689999999999999999865422   334445555432  111  2221           26


Q ss_pred             CCEEEEcCCCC
Q 025273           90 IDVVVSNAAAN  100 (255)
Q Consensus        90 ~d~lv~~ag~~  100 (255)
                      .|.+|...++.
T Consensus        68 ~d~vV~S~AI~   78 (96)
T d1p3da1          68 ASVVVVSSAIK   78 (96)
T ss_dssp             CSEEEECTTSC
T ss_pred             CCEEEECCCcC
Confidence            89999998874

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.41  E-value=0.45  Score=37.14  Aligned_cols=74  Identities=16%  Similarity=0.230  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+|++||-.|++.|+   ++..++++|+ +|++++.++ .++..++.....  ..++.++..|+.+.+-          .
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL----------P  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC----------c
Confidence            579999999998874   4566778897 599999775 444444444444  4588999998876431          0


Q ss_pred             hCCCCEEEEcC
Q 025273           87 FGKIDVVVSNA   97 (255)
Q Consensus        87 ~g~~d~lv~~a   97 (255)
                      -.+.|+++...
T Consensus       103 ~~~~D~i~se~  113 (328)
T d1g6q1_         103 FPKVDIIISEW  113 (328)
T ss_dssp             SSCEEEEEECC
T ss_pred             ccceeEEEEEe
Confidence            13689888754

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.39  E-value=0.19  Score=37.24  Aligned_cols=80  Identities=16%  Similarity=0.083  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH-cC----CeEEEEeCCchhHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHH
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGL-EG----ASVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNL   79 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~-~G----~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~   79 (255)
                      +|.+||..|+++|--.++.-++.. .|    .+|+.+.++++-.+...+.+...      ..++.++..|..+..     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            468999999998887777777764 45    47999999987666554443221      247888888875311     


Q ss_pred             HHHHHHHhCCCCEEEEcCCCC
Q 025273           80 INQTIEKFGKIDVVVSNAAAN  100 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~  100 (255)
                           ...++.|.++.+++..
T Consensus       155 -----~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         155 -----PPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             -----GGGCSEEEEEECSCBS
T ss_pred             -----ccccceeeEEEEeech
Confidence                 1124789999888763

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.26  E-value=0.33  Score=32.20  Aligned_cols=34  Identities=12%  Similarity=0.094  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      .+.++|.| +|-||.++|..|++.|.+|.++.+.+
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            57888887 47999999999999999999998764

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.19  E-value=0.52  Score=34.79  Aligned_cols=104  Identities=14%  Similarity=0.257  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQG-IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|.+||=.|+++| .-.++++..- .+..|+.++.++..++.+.+... ....+..+..|..+.+.....       .+.
T Consensus        73 pG~~VLDlGaGsG~~t~~la~~VG-~~G~V~aVD~s~~~l~~a~~~a~-~~~~~~~i~~d~~~~~~~~~~-------~~~  143 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSDIVG-WEGKIFGIEFSPRVLRELVPIVE-ERRNIVPILGDATKPEEYRAL-------VPK  143 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHS-SCTTEEEEECCTTCGGGGTTT-------CCC
T ss_pred             CCCEEEEeccCCCHHHHHHHHHhC-CCCEEEEEeCcHHHHHHHHHHHH-hcCCceEEEEECCCccccccc-------ccc
Confidence            4789999997655 4455555332 34579999999988887766553 345677788898877654322       236


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      +|.+++......                      -...+++.+...++++|.++..
T Consensus       144 vD~i~~d~~~~~----------------------~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         144 VDVIFEDVAQPT----------------------QAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             EEEEEECCCSTT----------------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEccccc----------------------hHHHHHHHHHHhcccCCeEEEE
Confidence            788877543211                      0122455566777887776643

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.07  E-value=0.16  Score=37.35  Aligned_cols=106  Identities=15%  Similarity=0.079  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .+++||=.|++.|.   ++..|++. +.+|+.++-+++.++..++..... ...+.++++|+.+..-          ..+
T Consensus        60 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~~----------~~~  126 (222)
T d2ex4a1          60 GTSCALDCGAGIGR---ITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP----------EPD  126 (222)
T ss_dssp             CCSEEEEETCTTTH---HHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC----------CSS
T ss_pred             CCCEEEEeccCCCH---hhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccccccccccc----------ccc
Confidence            45789999987774   44555544 457999999998888877766554 3467888888865321          013


Q ss_pred             CCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcc
Q 025273           89 KIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss  147 (255)
                      ..|+++.......       .+.+++.           .+++.+...++++|.+++...
T Consensus       127 ~fD~I~~~~~l~h-------~~~~~~~-----------~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         127 SYDVIWIQWVIGH-------LTDQHLA-----------EFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             CEEEEEEESCGGG-------SCHHHHH-----------HHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccc-------chhhhhh-----------hHHHHHHHhcCCcceEEEEEc
Confidence            6898887644321       2333222           234556677788888777643

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.04  E-value=0.39  Score=33.05  Aligned_cols=81  Identities=9%  Similarity=0.037  Sum_probs=51.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR------GIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      |-+.|- |-+|..+++.|++.|+.+ ..+|+.++.+...++....      -.....+...+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            445554 899999999999988765 5778877766665554221      01223344456667778777776655444


Q ss_pred             CCCEEEEcC
Q 025273           89 KIDVVVSNA   97 (255)
Q Consensus        89 ~~d~lv~~a   97 (255)
                      +-.++|.+.
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            445555554

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.00  E-value=0.17  Score=37.44  Aligned_cols=36  Identities=14%  Similarity=0.113  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      -.+|+|+|.||+ --|...|.+|+++|+.|.++.++.
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeecc
Confidence            457899999865 458999999999999999998764

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=90.97  E-value=0.073  Score=37.45  Aligned_cols=85  Identities=9%  Similarity=0.062  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHc-CCeE-EEEeCCchhH-HHHHHHH--------------HhcCCeEEEEEecCCCHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLE-GASV-VVSSRKQKNV-DEAVVKL--------------KARGIEVIGVVCHVSNGQ   74 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~-G~~V-~~~~r~~~~~-~~~~~~~--------------~~~~~~~~~~~~Dv~~~~   74 (255)
                      .-+|.|.|++|-+|+++++...+. ++++ .+++|..... .....++              ........ +..|+|.++
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~   82 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPE   82 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHH
Confidence            346999999999999999999876 6664 3445432210 0000000              00000111 457999999


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEcCCC
Q 025273           75 QRKNLINQTIEKFGKIDVVVSNAAA   99 (255)
Q Consensus        75 ~v~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      ...+.++.+.+.  ++.+++-..|+
T Consensus        83 ~~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          83 GTLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHhc--cceeEEecCCC
Confidence            999999877665  68888866664

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.97  E-value=1.9  Score=30.78  Aligned_cols=143  Identities=15%  Similarity=0.120  Sum_probs=76.6

Q ss_pred             CCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           10 FQGKVAIVTAST--QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        10 l~~k~vlItGa~--~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      ..++++++....  .....+++..|...|..++.+.-+...                       +.+.   +.+. ....
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~-----------------------~~~~---l~~~-~~~~   75 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDARC-----------------------GRDE---LAER-LRSV   75 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTTC-----------------------CHHH---HHHH-HTTS
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCcc-----------------------CHHH---HHHH-hhcc
Confidence            345555544332  236677888888888887665443221                       1122   2222 2234


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEcccCccCCCCCChhhHhhHHHH
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~  167 (255)
                      +.++.+||..+.......  ....      ....+...+.+.|++...- ...++.+++.... .....-..-....+++
T Consensus        76 ~~~~~vv~l~~~~~~~~~--~~~~------~~~~~~~~l~l~qal~~~~-~~~~l~~vT~~a~-~~~~~d~~~~p~~A~l  145 (209)
T d2fr1a2          76 GEVAGVLSLLAVDEAEPE--EAPL------ALASLADTLSLVQAMVSAE-LGCPLWTVTESAV-ATGPFERVRNAAHGAL  145 (209)
T ss_dssp             CCCSEEEECTTTTCCCCS--SCGG------GCHHHHHHHHHHHHHHHTT-CCCCEEEEEESCS-CSSTTSCCSCGGGHHH
T ss_pred             CCCCeEEEeCCCCCCCCc--chhH------HHHHHHHHHHHHHHHHhCC-CCCcEEEEEcCCc-ccCCCcccCCHhHHhH
Confidence            578999998765432111  1111      1122445566667665432 2345666554322 1112222234578999


Q ss_pred             HHHHHHHHHHhCC-CeeEEEEeC
Q 025273          168 LGLTKALAAEMAP-DTRVNCVAP  189 (255)
Q Consensus       168 ~~l~~~la~e~~~-~v~v~~v~p  189 (255)
                      -+|+|.++.|+.. .+++..+-+
T Consensus       146 ~Gl~r~~~~E~P~l~~~~vDl~~  168 (209)
T d2fr1a2         146 WGVGRVIALENPAVWGGLVDVPA  168 (209)
T ss_dssp             HHHHHHHHHHCGGGEEEEEEECT
T ss_pred             HHHHHHHHHhCCCceEEEEECCC
Confidence            9999999999865 566666643

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.91  E-value=0.075  Score=34.45  Aligned_cols=38  Identities=13%  Similarity=0.134  Sum_probs=30.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      .+++||+|+|.|++ .-|..++.+|++.+.+|+...|..
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            35889999999976 678899999998888877666654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.91  E-value=0.094  Score=40.52  Aligned_cols=35  Identities=20%  Similarity=0.201  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      +.|+|+|.||+ --|..+|..|+++|++|+++.++.
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45889999875 459999999999999999998764

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=90.89  E-value=1.3  Score=32.86  Aligned_cols=101  Identities=18%  Similarity=0.119  Sum_probs=63.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .++||=.|++.|.   .+..|+++  +.++++++. ++.++...+.+...  ..++.++..|+.+..            .
T Consensus        81 ~~~VLDvGcG~G~---~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~D~~~~~------------~  144 (253)
T d1tw3a2          81 VRHVLDVGGGKGG---FAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL------------P  144 (253)
T ss_dssp             CSEEEEETCTTSH---HHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC------------S
T ss_pred             CCEEEEeCCCCCH---HHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccccchhhc------------c
Confidence            4789988877662   34455555  567888886 45566666666555  468999999986421            1


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ++.|+++...-.       +..+.++.           ..+++.+.+.|+++|+++..-
T Consensus       145 ~~~D~v~~~~vl-------h~~~d~~~-----------~~~L~~~~~~LkPGG~l~i~e  185 (253)
T d1tw3a2         145 RKADAIILSFVL-------LNWPDHDA-----------VRILTRCAEALEPGGRILIHE  185 (253)
T ss_dssp             SCEEEEEEESCG-------GGSCHHHH-----------HHHHHHHHHTEEEEEEEEEEE
T ss_pred             cchhheeecccc-------ccCCchhh-----------HHHHHHHHHhcCCCcEEEEEe
Confidence            256887755322       22333332           235667778889888888753

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=90.89  E-value=0.12  Score=39.28  Aligned_cols=37  Identities=22%  Similarity=0.225  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCCchHHHH-----HHHHHHcCCeEEEEeCCch
Q 025273           11 QGKVAIVTASTQGIGFGI-----AERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~-----a~~l~~~G~~V~~~~r~~~   47 (255)
                      .+++++|+.|-||+|..+     +..|+++|.+|.++|-+..
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            478888888899999876     7899999999999999865

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.80  E-value=1.2  Score=33.91  Aligned_cols=102  Identities=12%  Similarity=0.017  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQG-IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .|.+||=.|++-| ....+++   +.|++|+.++.+++..+...+.+...  ..++.+..+|..+.+             
T Consensus        62 ~G~~VLDiGCG~G~~a~~~a~---~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~~~-------------  125 (285)
T d1kpga_          62 PGMTLLDVGCGWGATMMRAVE---KYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-------------  125 (285)
T ss_dssp             TTCEEEEETCTTSHHHHHHHH---HHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-------------
T ss_pred             CCCEEEEecCcchHHHHHHHh---cCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhccc-------------
Confidence            4789999997755 4444444   35999999999998888777766555  357888777764332             


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ++.|.++..-.... ..   .           -|..   .+.+.+...|+++|+++.-.
T Consensus       126 ~~fD~i~si~~~eh-~~---~-----------~~~~---~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         126 EPVDRIVSIGAFEH-FG---H-----------ERYD---AFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             CCCSEEEEESCGGG-TC---T-----------TTHH---HHHHHHHHHSCTTCEEEEEE
T ss_pred             ccccceeeehhhhh-cC---c-----------hhHH---HHHHHHHhhcCCCCcEEEEE
Confidence            36888876543322 11   1           1111   14555667788888877643

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.71  E-value=0.085  Score=44.53  Aligned_cols=36  Identities=14%  Similarity=0.206  Sum_probs=30.3

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEeCC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGAS-VVVSSRK   45 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~-V~~~~r~   45 (255)
                      .|+..+|+|.|+ ||+|.++++-|+..|.. ++++|.+
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            366788999987 78999999999999964 8888754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.65  E-value=0.15  Score=38.15  Aligned_cols=36  Identities=22%  Similarity=0.123  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      ..++|+|.|| |--|..+|..|+++|++|+++.|+.+
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4577999986 45688999999999999999998753

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.61  E-value=0.51  Score=34.91  Aligned_cols=63  Identities=10%  Similarity=0.057  Sum_probs=43.5

Q ss_pred             CCCEEEEEcCCCch-HHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 025273           11 QGKVAIVTASTQGI-GFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQR   76 (255)
Q Consensus        11 ~~k~vlItGa~~gi-G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   76 (255)
                      .|.+||=.||++|. -.++++. .. +..|++++.++..++.+.+... ....+.++..|..+....
T Consensus        74 pG~~VLDlGcGsG~~~~~la~~-~~-~g~V~aVDiS~~~i~~a~~~a~-~~~ni~~i~~d~~~~~~~  137 (230)
T d1g8sa_          74 RDSKILYLGASAGTTPSHVADI-AD-KGIVYAIEYAPRIMRELLDACA-ERENIIPILGDANKPQEY  137 (230)
T ss_dssp             TTCEEEEESCCSSHHHHHHHHH-TT-TSEEEEEESCHHHHHHHHHHTT-TCTTEEEEECCTTCGGGG
T ss_pred             CCCEEEEeCEEcCHHHHHHHHh-CC-CCEEEEEeCcHHHHHHHHHHHh-hhcccceEEEeeccCccc
Confidence            37899999988773 3344432 22 2479999999988887665543 345677788888877653

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.59  E-value=0.46  Score=30.91  Aligned_cols=35  Identities=11%  Similarity=0.071  Sum_probs=27.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHc---CCeEEEEeCCch
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLE---GASVVVSSRKQK   47 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~---G~~V~~~~r~~~   47 (255)
                      .++++|.|| |.+|.++|..|.+.   |.+|.++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            578999987 89999999877654   457999987653

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.29  E-value=3.1  Score=32.14  Aligned_cols=104  Identities=11%  Similarity=0.028  Sum_probs=61.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCchhHHHHHHHHHh----------cCCeEEEEEecCCCHHHHHHHH
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQKNVDEAVVKLKA----------RGIEVIGVVCHVSNGQQRKNLI   80 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~   80 (255)
                      +.++|=.|++.|  ..+.......|+ +++.++.++...+...+....          ...++.+++.|+.+.+--+..+
T Consensus       152 ~~~vlD~GcG~G--~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~~~~~~~~~  229 (328)
T d1nw3a_         152 DDLFVDLGSGVG--QVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIA  229 (328)
T ss_dssp             TCEEEEETCTTS--HHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEcCCCCC--HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccccccccccC
Confidence            678888886554  222222234465 599999998776654443322          2467999999999876433332


Q ss_pred             HHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           81 NQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                              ..|+++.+.-...         ++ .           ...++.+...|+++++||..-
T Consensus       230 --------~advi~~~~~~f~---------~~-~-----------~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         230 --------NTSVIFVNNFAFG---------PE-V-----------DHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             --------HCSEEEECCTTTC---------HH-H-----------HHHHHHHHTTCCTTCEEEESS
T ss_pred             --------cceEEEEcceecc---------hH-H-----------HHHHHHHHHhCCCCcEEEEec
Confidence                    3677775532211         11 1           123344556788899987643

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=90.19  E-value=0.15  Score=39.61  Aligned_cols=32  Identities=28%  Similarity=0.291  Sum_probs=23.9

Q ss_pred             CEEEEEcCCCchHH-----HHHHHHHHcCCeEEEEeCC
Q 025273           13 KVAIVTASTQGIGF-----GIAERLGLEGASVVVSSRK   45 (255)
Q Consensus        13 k~vlItGa~~giG~-----~~a~~l~~~G~~V~~~~r~   45 (255)
                      |+|||++|++| |.     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            56777766444 54     5889999999999887654

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=90.19  E-value=0.56  Score=36.43  Aligned_cols=109  Identities=10%  Similarity=0.034  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEeCCchhHHHHHHHHHh-----cCCeEEEEEecCCCHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEG--ASVVVSSRKQKNVDEAVVKLKA-----RGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      ...|+|||.|++.|   .+++++++..  .+|.++..+++-.+-.++-+..     ..+++.++..|-.      ++   
T Consensus       105 ~~pk~VLIiGgG~G---~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~------~~---  172 (312)
T d2b2ca1         105 PDPKRVLIIGGGDG---GILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGF------EF---  172 (312)
T ss_dssp             SSCCEEEEESCTTS---HHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHH------HH---
T ss_pred             CCCCeEEEeCCCch---HHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHH------HH---
Confidence            45789999998876   3455666653  4799999998766655554432     1467887766632      22   


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      +++.-.+.|++|...--..  .    .+          ..+-+.-+.+.+...|+++|.++.=+
T Consensus       173 l~~~~~~yDvII~D~~dp~--~----~~----------~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         173 LKNHKNEFDVIITDSSDPV--G----PA----------ESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             HHHCTTCEEEEEECCC-----------------------------HHHHHHHHEEEEEEEEEEC
T ss_pred             HHhCCCCCCEEEEcCCCCC--C----cc----------hhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            2333347999998743211  1    00          01112224455666777777776654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.11  E-value=0.26  Score=33.11  Aligned_cols=37  Identities=14%  Similarity=0.091  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchh
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKN   48 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~   48 (255)
                      ++|+++|.| +|.+|.++|..|++.|.+|.++.+....
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence            368888886 5899999999999999999999987543

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=90.10  E-value=0.6  Score=35.54  Aligned_cols=77  Identities=13%  Similarity=0.064  Sum_probs=56.0

Q ss_pred             CCEEEEEc-CCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           12 GKVAIVTA-STQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGI-EVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        12 ~k~vlItG-a~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +.++|=.| |||-||.+++..+  ...+|+++|.+...++..++-....+. ++.+++.|+.+.-.           ..+
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~~-----------~~~  175 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA-----------GQQ  175 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT-----------TCC
T ss_pred             ccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeecccccccC-----------CCc
Confidence            44577666 4566666666543  357899999999998887777766654 69999999875421           137


Q ss_pred             CCEEEEcCCCCC
Q 025273           90 IDVVVSNAAANP  101 (255)
Q Consensus        90 ~d~lv~~ag~~~  101 (255)
                      +|++|.|.-+..
T Consensus       176 fDlIvsNPPYi~  187 (274)
T d2b3ta1         176 FAMIVSNPPYID  187 (274)
T ss_dssp             EEEEEECCCCBC
T ss_pred             eeEEEecchhhh
Confidence            999999988765

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=89.86  E-value=0.78  Score=29.85  Aligned_cols=81  Identities=11%  Similarity=0.162  Sum_probs=54.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +|+|||.=-...+-..+.+.|.+.|++|..+....+.++    .+......+.++-..+-+.+. -++++++++..+.+.
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~----~~~~~~~dlillD~~mP~~~G-~el~~~lr~~~~~~p   75 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALD----IVTKERPDLVLLDMKIPGMDG-IEILKRMKVIDENIR   75 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHH----HHHHHCCSEEEEESCCTTCCH-HHHHHHHHHHCTTCE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHH----HHHhCCCCEEEEeccCCCCCH-HHHHHHHHHhCCCCc
Confidence            578999998999999999999999999887654443333    333334455555444445444 356777877666666


Q ss_pred             EEEEcC
Q 025273           92 VVVSNA   97 (255)
Q Consensus        92 ~lv~~a   97 (255)
                      +++..+
T Consensus        76 vi~lt~   81 (119)
T d1peya_          76 VIIMTA   81 (119)
T ss_dssp             EEEEES
T ss_pred             EEEEec
Confidence            666553

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.78  E-value=2  Score=29.76  Aligned_cols=35  Identities=0%  Similarity=-0.194  Sum_probs=24.2

Q ss_pred             EEEEEcC-CCchHHHHHHHHHHcC----CeEEEEeCCchh
Q 025273           14 VAIVTAS-TQGIGFGIAERLGLEG----ASVVVSSRKQKN   48 (255)
Q Consensus        14 ~vlItGa-~~giG~~~a~~l~~~G----~~V~~~~r~~~~   48 (255)
                      ++.|.|| +.+.+..++..++...    -.+++.|.+++.
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            4667775 5667777777666532    379999998754

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.48  E-value=0.27  Score=36.77  Aligned_cols=34  Identities=24%  Similarity=0.400  Sum_probs=28.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEe
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLE-GASVVVSS   43 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~   43 (255)
                      +++||+|+|-|- |.+|+++++.|+++ |++|+.+.
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            489999999986 67999999999865 89877653

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.45  E-value=1.2  Score=31.41  Aligned_cols=81  Identities=11%  Similarity=0.124  Sum_probs=56.7

Q ss_pred             cCCCCEEE-EEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHH
Q 025273            9 RFQGKVAI-VTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTI   84 (255)
Q Consensus         9 ~l~~k~vl-ItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   84 (255)
                      .++|++|| +..|+|++|.+    .+.+|+. |++++.+....+.+++.+...  ..++.++..|+.      +++++..
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhc
Confidence            46788888 55567777775    4568886 999999998888877776544  347888888863      2344444


Q ss_pred             HHhCCCCEEEEcCCC
Q 025273           85 EKFGKIDVVVSNAAA   99 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~   99 (255)
                      ....+.|+++..+-+
T Consensus       109 ~~~~~fDlIflDPPY  123 (182)
T d2fhpa1         109 EEKLQFDLVLLDPPY  123 (182)
T ss_dssp             HTTCCEEEEEECCCG
T ss_pred             ccCCCcceEEechhh
Confidence            444478999977643

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=89.43  E-value=0.18  Score=38.00  Aligned_cols=31  Identities=26%  Similarity=0.188  Sum_probs=27.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      |+|.| +|-.|..+|.+|+++|.+|++++++.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            77776 47889999999999999999999875

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=89.29  E-value=0.72  Score=33.76  Aligned_cols=102  Identities=12%  Similarity=0.048  Sum_probs=70.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG-IEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|.+||=.|++.|   .++..|++.+.+|+.+|.++..++..++.....+ .++.+++.|..+.+ ..         -+.
T Consensus        16 ~~~rILDiGcGtG---~~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-~~---------~~~   82 (234)
T d1xxla_          16 AEHRVLDIGAGAG---HTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FP---------DDS   82 (234)
T ss_dssp             TTCEEEEESCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SC---------TTC
T ss_pred             CCCEEEEeCCcCc---HHHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-cc---------ccc
Confidence            3788999998888   4456777889999999999988887777666553 56889999987532 11         137


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      +|.++.+-.... .     .++              -.+++.+...|+++|.+++.
T Consensus        83 fD~v~~~~~l~~-~-----~d~--------------~~~l~~~~r~LkpgG~~~~~  118 (234)
T d1xxla_          83 FDIITCRYAAHH-F-----SDV--------------RKAVREVARVLKQDGRFLLV  118 (234)
T ss_dssp             EEEEEEESCGGG-C-----SCH--------------HHHHHHHHHHEEEEEEEEEE
T ss_pred             cceeeeeceeec-c-----cCH--------------HHHHHHHHHeeCCCcEEEEE
Confidence            898877644321 1     112              23456667788888887774

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.07  E-value=0.24  Score=38.53  Aligned_cols=36  Identities=17%  Similarity=0.254  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      +.|+|+|.|| |--|..+|..|+++|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4688999986 45688889999999999999987643

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.99  E-value=0.73  Score=35.44  Aligned_cols=110  Identities=11%  Similarity=0.074  Sum_probs=62.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-C-CeEEEEeCCchhHHHHHHHHHh-----cCCeEEEEEecCCCHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLE-G-ASVVVSSRKQKNVDEAVVKLKA-----RGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      ...|+|||.|+++|   .+++++++. + .+|.++..+++-.+-.++.+..     ..+++.++..|-.      +.+  
T Consensus        88 ~~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~------~~l--  156 (295)
T d1inla_          88 PNPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGA------EYV--  156 (295)
T ss_dssp             SSCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH------HHG--
T ss_pred             CCCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHH------HHH--
Confidence            45689999999877   456677665 3 5699999998766654443322     2468887776642      122  


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                       .+.-.+.|++|...--........-.+.               -+.+.+...|+++|.++.=+
T Consensus       157 -~~~~~~yDvIi~D~~dp~~~~~~~L~t~---------------efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         157 -RKFKNEFDVIIIDSTDPTAGQGGHLFTE---------------EFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             -GGCSSCEEEEEEEC----------CCSH---------------HHHHHHHHHEEEEEEEEEEC
T ss_pred             -hcCCCCCCEEEEcCCCCCcCchhhhccH---------------HHHHHHHhhcCCCcEEEEec
Confidence             2223479999976421110000011122               24555667778777766543

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.94  E-value=0.92  Score=34.66  Aligned_cols=109  Identities=10%  Similarity=0.079  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHHHh-----cCCeEEEEEecCCCHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKA-----RGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      ...|+|||.|+++|   .+++++++.  ..+|+++..+++-.+-.++-+..     ..+++.++..|-.      +.+  
T Consensus        77 ~~pk~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~------~~l--  145 (285)
T d2o07a1          77 PNPRKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGF------EFM--  145 (285)
T ss_dssp             SSCCEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH------HHH--
T ss_pred             cCcCeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHH------HHH--
Confidence            45689999998877   455666665  35699999987766655444321     2578888877732      222  


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                       .+.-.+.|++|..+--.  ...    .          .-+-+.-+.+.+...|+++|.++.=+
T Consensus       146 -~~~~~~yDvIi~D~~~p--~~~----~----------~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         146 -KQNQDAFDVIITDSSDP--MGP----A----------ESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             -HTCSSCEEEEEEECC---------------------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             -hcCCCCCCEEEEcCCCC--CCc----c----------cccccHHHHHHHHHhcCCCCeEEEec
Confidence             22234799999875311  110    0          01112224555667777777766543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.69  E-value=0.22  Score=36.31  Aligned_cols=31  Identities=19%  Similarity=0.218  Sum_probs=27.1

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      |+|.| +|--|..+|..|+++|.+|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            78887 56679999999999999999998874

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.64  E-value=0.23  Score=34.56  Aligned_cols=35  Identities=17%  Similarity=0.214  Sum_probs=29.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEeCCc
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGA--SVVVSSRKQ   46 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~--~V~~~~r~~   46 (255)
                      .||+|+|.|| |-.|..+|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999986 5679999999999885  688887764

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.49  E-value=1.4  Score=28.81  Aligned_cols=76  Identities=8%  Similarity=0.001  Sum_probs=49.9

Q ss_pred             CCEEEEEcCCCc----------hHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHH
Q 025273           12 GKVAIVTASTQG----------IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus        12 ~k~vlItGa~~g----------iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      .|+|||.|++.-          -+.+.++.|.++|++++++..|++......    ....++.+-+   -..+.+.+.++
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~----d~aD~lYfep---lt~e~v~~Ii~   76 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY----DTSDRLYFEP---VTLEDVLEIVR   76 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST----TSSSEEECCC---CSHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh----hhcCceEEcc---CCHHHHHHHHH
Confidence            578999997532          266889999999999999999887543211    1123554422   23556666555


Q ss_pred             HHHHHhCCCCEEEEcCCC
Q 025273           82 QTIEKFGKIDVVVSNAAA   99 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~   99 (255)
                      .=     ++|.++-..|.
T Consensus        77 ~E-----~p~~ii~~~GG   89 (121)
T d1a9xa4          77 IE-----KPKGVIVQYGG   89 (121)
T ss_dssp             HH-----CCSEEECSSST
T ss_pred             Hh-----CCCEEEeehhh
Confidence            32     79998877663

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=88.46  E-value=2.8  Score=30.63  Aligned_cols=109  Identities=11%  Similarity=0.088  Sum_probs=67.1

Q ss_pred             CCCCEEEEEcCCCchHHH-HHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFG-IAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~-~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+.|+||=.|...|.... +++.+ ..+.+|+.+..+++..+...+.+...+  .++.++..|.  .+.+.++.+. ...
T Consensus        58 ~~~k~iLEiGT~~GyStl~la~al-~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a--~~~L~~l~~~-~~~  133 (227)
T d1susa1          58 INAKNTMEIGVYTGYSLLATALAI-PEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA--LPVLDEMIKD-EKN  133 (227)
T ss_dssp             HTCCEEEEECCGGGHHHHHHHHHS-CTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH--HHHHHHHHHC-GGG
T ss_pred             cCCCcEEEecchhhhhHHHHHhhC-CCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHH--HHHHHHHHhc-ccc
Confidence            356899999866554333 33333 346799999999988777777776553  4677766654  2333333321 112


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      .+.+|.++..+.-..                       .....+.+.++++++|.||.=
T Consensus       134 ~~~fD~iFiDa~k~~-----------------------y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         134 HGSYDFIFVDADKDN-----------------------YLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             TTCBSEEEECSCSTT-----------------------HHHHHHHHHHHBCTTCCEEEE
T ss_pred             CCceeEEEeccchhh-----------------------hHHHHHHHHhhcCCCcEEEEc
Confidence            357999998865311                       122344456788888887774

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=88.41  E-value=0.55  Score=32.64  Aligned_cols=38  Identities=21%  Similarity=0.316  Sum_probs=33.9

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      -+.||+++|.| =|-+|+.+|+.|...|++|+++..++-
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCch
Confidence            37899999997 467999999999999999999998864

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.36  E-value=0.36  Score=32.25  Aligned_cols=87  Identities=21%  Similarity=0.156  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCC---CchHHHHHHHHHHcC-CeEEEEeCCchhHHH--HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273           10 FQGKVAIVTAST---QGIGFGIAERLGLEG-ASVVVSSRKQKNVDE--AVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus        10 l~~k~vlItGa~---~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      ++.|.|.|.|+|   +..|..+.+.|.+.| .+|+.+..+.+....  ....+.+.+..+..... ....+.+.++++++
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi-~vp~~~~~~~~~~~   84 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII-VVPKRFVKDTLIQC   84 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE-CSCHHHHHHHHHHH
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE-ecChHHhHHHHHHH
Confidence            678999999998   889999999987766 579888765443211  11112211222222111 23577888888888


Q ss_pred             HHHhCCCCE-EEEcCCC
Q 025273           84 IEKFGKIDV-VVSNAAA   99 (255)
Q Consensus        84 ~~~~g~~d~-lv~~ag~   99 (255)
                      .+.  .+.. ++..+|+
T Consensus        85 ~~~--g~~~~vi~s~Gf   99 (129)
T d2csua1          85 GEK--GVKGVVIITAGF   99 (129)
T ss_dssp             HHH--TCCEEEECCCSS
T ss_pred             HHc--CCCEEEEecccc
Confidence            766  4555 4444454

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.10  E-value=0.61  Score=32.38  Aligned_cols=74  Identities=8%  Similarity=-0.137  Sum_probs=40.3

Q ss_pred             EEEEEcCCCchHHHHHHH-HHH-c----CCeEEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           14 VAIVTASTQGIGFGIAER-LGL-E----GASVVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~-l~~-~----G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      ++.|.||++ +|..++-. |++ .    +.++++.|.++++++...+..... .....+. .. ++.+   +.+      
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~-~t-~~~~---~~l------   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL-IS-DTFE---GAV------   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEE-EC-SSHH---HHH------
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEE-Ee-cCcc---ccc------
Confidence            578888754 56555433 222 1    357999999988876543332221 1121111 11 2222   112      


Q ss_pred             hCCCCEEEEcCCCC
Q 025273           87 FGKIDVVVSNAAAN  100 (255)
Q Consensus        87 ~g~~d~lv~~ag~~  100 (255)
                       ..-|++|..+|..
T Consensus        70 -~~aDvVVita~~~   82 (162)
T d1up7a1          70 -VDAKYVIFQFRPG   82 (162)
T ss_dssp             -TTCSEEEECCCTT
T ss_pred             -CCCCEEEEecccC
Confidence             2689999999864

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=87.98  E-value=0.19  Score=36.40  Aligned_cols=31  Identities=16%  Similarity=0.135  Sum_probs=27.3

Q ss_pred             CEEEEEcCCCchHH-----HHHHHHHHcCCeEEEEe
Q 025273           13 KVAIVTASTQGIGF-----GIAERLGLEGASVVVSS   43 (255)
Q Consensus        13 k~vlItGa~~giG~-----~~a~~l~~~G~~V~~~~   43 (255)
                      |+.+|||-++|+|.     .++..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999999989986     56788999999999987

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.92  E-value=0.39  Score=32.72  Aligned_cols=36  Identities=11%  Similarity=0.099  Sum_probs=28.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcC---CeEEEEeCCchh
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEG---ASVVVSSRKQKN   48 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G---~~V~~~~r~~~~   48 (255)
                      .+|.|.||||-+|+.+.+.|.++.   .++..++.+...
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~   41 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA   41 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccC
Confidence            569999999999999999998654   357766655443

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=87.81  E-value=1.2  Score=34.63  Aligned_cols=78  Identities=15%  Similarity=0.148  Sum_probs=43.1

Q ss_pred             EEEE-EcCCCch---HHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCC----------------H
Q 025273           14 VAIV-TASTQGI---GFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSN----------------G   73 (255)
Q Consensus        14 ~vlI-tGa~~gi---G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~----------------~   73 (255)
                      +||| ++||+|=   -.+++++|+++|++|++++...-  .   +.+...+-.+..+..+...                .
T Consensus         2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~--~---~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (391)
T d1pn3a_           2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDY--V---ERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVT   76 (391)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGG--H---HHHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHH
T ss_pred             EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChhh--H---hHHHHCCCeEEECCccHHHHhhChhhhhHHHHHHHH
Confidence            4555 5555332   35689999999999998874321  2   2222223333333222211                2


Q ss_pred             HHHHHHHHHHHHHhCCCCEEEEc
Q 025273           74 QQRKNLINQTIEKFGKIDVVVSN   96 (255)
Q Consensus        74 ~~v~~~~~~~~~~~g~~d~lv~~   96 (255)
                      ..++..++.+.+....+|.+|..
T Consensus        77 ~~~~~~~~~l~~~~~~~D~vi~~   99 (391)
T d1pn3a_          77 EVVAEWFDKVPAAIEGCDAVVTT   99 (391)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEc
Confidence            23455556666666679998864

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.51  E-value=4.5  Score=30.47  Aligned_cols=127  Identities=17%  Similarity=0.150  Sum_probs=75.2

Q ss_pred             CCCEEEEEcCC-CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           11 QGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        11 ~~k~vlItGa~-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      .|.+||=..|+ ||=-.+++. +. ....|++.+.+..+++.+.+.+...+.+...+..+-.......        ..+.
T Consensus       102 ~g~~vLD~CAaPGgKt~~la~-l~-~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~~--------~~~~  171 (284)
T d1sqga2         102 NGEHILDLCAAPGGKTTHILE-VA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWC--------GEQQ  171 (284)
T ss_dssp             TTCEEEEESCTTCHHHHHHHH-HC-TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHH--------TTCC
T ss_pred             ccceeEeccCccccchhhhhh-hh-hhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchhc--------cccc
Confidence            46788866655 444444443 32 2356999999999999999988887766555554443322211        1236


Q ss_pred             CCEEEEcCCCCCCCCCccCCCHHHH---HHHHHHHhHHHHHHHHHHhhcccCCCeEEEEccc
Q 025273           90 IDVVVSNAAANPSVDSILQTKESVL---DKLWDINVKSSILLLQDAAPHLQKGSSVVLISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~iss~  148 (255)
                      .|.++.-|-.++. +.+...+...|   .+.+.-...-...++..+.++++.+|.+|+..-+
T Consensus       172 fd~IL~DaPCSg~-G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTCS  232 (284)
T d1sqga2         172 FDRILLDAPCSAT-GVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS  232 (284)
T ss_dssp             EEEEEEECCCCCG-GGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred             ccEEEEecccccc-CccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeeec
Confidence            8988877755441 22211111111   1112223344666788888889988999986643

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=87.36  E-value=0.7  Score=38.16  Aligned_cols=80  Identities=16%  Similarity=0.144  Sum_probs=51.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      .++||++.|.|+ +....++++.|.+.|..|+.++-.....+.........+...  +..|-.+..++++.+++.     
T Consensus       342 ~l~Gkrv~i~~~-~~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~~--~i~~d~~~~el~~~i~~~-----  413 (477)
T d1m1na_         342 RLEGKRVMLYIG-GLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDST--LLYDDVTGYEFEEFVKRI-----  413 (477)
T ss_dssp             HHTTCEEEECBS-SSHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTTC--EEEESCBHHHHHHHHHHH-----
T ss_pred             hhcCCcEEEecC-chhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCCc--EEecCCCHHHHHHHHHhc-----
Confidence            478999999876 468899999998889998877644333222222121112221  224555677888887766     


Q ss_pred             CCCEEEEc
Q 025273           89 KIDVVVSN   96 (255)
Q Consensus        89 ~~d~lv~~   96 (255)
                      ++|+++-+
T Consensus       414 ~pDL~ig~  421 (477)
T d1m1na_         414 KPDLIGSG  421 (477)
T ss_dssp             CCSEEEEC
T ss_pred             CCCEEEEC
Confidence            89999843

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.29  E-value=2.5  Score=27.26  Aligned_cols=84  Identities=12%  Similarity=0.099  Sum_probs=51.4

Q ss_pred             CEEEEEcCC---CchHHHHHHHHHHcCCeEEEEeCCchhHHH--HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           13 KVAIVTAST---QGIGFGIAERLGLEGASVVVSSRKQKNVDE--AVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        13 k~vlItGa~---~giG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      |.+.|.|+|   +-.|..+.+.|.+.|++|+.+..+.+....  ....+.+.+..+.... =....+.+.++++++.+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vv-i~vp~~~~~~~l~~~~~~-   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIV-FVVPPKVGLQVAKEAVEA-   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEE-ECSCHHHHHHHHHHHHHT-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEE-EEeCHHHHHHHHHHHHhc-
Confidence            789999998   668999999999999999988655432111  1111222222222111 124567777777777654 


Q ss_pred             CCCCEEEEcCCC
Q 025273           88 GKIDVVVSNAAA   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                       .+..++...|.
T Consensus        80 -g~k~v~~~~g~   90 (116)
T d1y81a1          80 -GFKKLWFQPGA   90 (116)
T ss_dssp             -TCCEEEECTTS
T ss_pred             -CCceEEeccch
Confidence             46666665553

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=87.28  E-value=0.23  Score=37.38  Aligned_cols=32  Identities=19%  Similarity=0.229  Sum_probs=27.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      +|+|.|| |--|..+|..|+++|++|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            5888987 6678999999999999999998753

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.03  E-value=0.29  Score=35.73  Aligned_cols=38  Identities=18%  Similarity=0.301  Sum_probs=32.1

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      .+++||+|+|.|++. -|..+|.++++.+.+++.+.|..
T Consensus        28 ~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCEEEEECCCc-cHHHHHHHHHhhhcccccccccc
Confidence            458999999998654 58999999999999988887774

>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein YvdD
species: Bacillus subtilis [TaxId: 1423]

Probab=86.78  E-value=2.9  Score=29.21  Aligned_cols=13  Identities=15%  Similarity=-0.041  Sum_probs=9.9

Q ss_pred             CCCEEEEcCCCCC
Q 025273           89 KIDVVVSNAAANP  101 (255)
Q Consensus        89 ~~d~lv~~ag~~~  101 (255)
                      .-|.+|-.+|...
T Consensus        97 ~sdafI~lPGG~G  109 (179)
T d1t35a_          97 LADGFISMPGGFG  109 (179)
T ss_dssp             HCSEEEECSCCHH
T ss_pred             hcCeEEEecCccc
Confidence            4699998888654

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.67  E-value=0.33  Score=37.09  Aligned_cols=31  Identities=16%  Similarity=0.280  Sum_probs=26.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCC-eEEEEeCCc
Q 025273           15 AIVTASTQGIGFGIAERLGLEGA-SVVVSSRKQ   46 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~-~V~~~~r~~   46 (255)
                      |+|.|| |-+|.++|.+|+++|. +|++++|+.
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            777775 5889999999999997 599998874

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=86.55  E-value=0.6  Score=34.02  Aligned_cols=105  Identities=12%  Similarity=0.060  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQG-IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .+.+||=.|++.| +...+++++...+++|+.+|.+++.++...+.+...  ..++.+...|..+.+-            
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~------------  106 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEI------------  106 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCC------------
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhcccc------------
Confidence            4678999997655 455666655557899999999999999888777654  3466666667653221            


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      ++.|+++.+...       ...+.++..           .+++.+.+.|+++|.+++.
T Consensus       107 ~~~d~i~~~~~l-------~~~~~~d~~-----------~~l~~i~~~LkpgG~li~~  146 (225)
T d1im8a_         107 KNASMVILNFTL-------QFLPPEDRI-----------ALLTKIYEGLNPNGVLVLS  146 (225)
T ss_dssp             CSEEEEEEESCG-------GGSCGGGHH-----------HHHHHHHHHEEEEEEEEEE
T ss_pred             ccceeeEEeeec-------cccChhhHH-----------HHHHHHHHhCCCCceeecc
Confidence            245666654332       112222222           2556677888888888874

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.49  E-value=2  Score=32.49  Aligned_cols=77  Identities=10%  Similarity=0.088  Sum_probs=47.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHH-----------hcCCeEEEEEecCCCHHHH
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLK-----------ARGIEVIGVVCHVSNGQQR   76 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~~~~~Dv~~~~~v   76 (255)
                      ..+.+.|||.|+++|.   +++++++.+ -+|.++..+++-.+-.++-+.           ...+++.++..|..     
T Consensus        70 ~~~p~~vLiiG~G~G~---~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~-----  141 (276)
T d1mjfa_          70 HPKPKRVLVIGGGDGG---TVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGF-----  141 (276)
T ss_dssp             SSCCCEEEEEECTTSH---HHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHH-----
T ss_pred             CCCCceEEEecCCchH---HHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHH-----
Confidence            3567899999988762   334445554 358889888765544332221           12568888877753     


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCC
Q 025273           77 KNLINQTIEKFGKIDVVVSNAA   98 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                       +.++   + ..+.|++|..+-
T Consensus       142 -~~l~---~-~~~yDvIi~D~~  158 (276)
T d1mjfa_         142 -EFIK---N-NRGFDVIIADST  158 (276)
T ss_dssp             -HHHH---H-CCCEEEEEEECC
T ss_pred             -HHHh---c-cCCCCEEEEeCC
Confidence             2222   1 357999998754

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=86.45  E-value=0.15  Score=36.23  Aligned_cols=38  Identities=16%  Similarity=0.069  Sum_probs=28.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDE   51 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~   51 (255)
                      +|-|.||||-.|..+.+.|+++- .++..+..+....+.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~   41 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKK   41 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSB
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCc
Confidence            68999999999999999999874 456665554444333

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=86.35  E-value=2.3  Score=32.05  Aligned_cols=108  Identities=10%  Similarity=0.006  Sum_probs=64.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-C-CeEEEEeCCchhHHHHHHHHHh-----cCCeEEEEEecCCCHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLE-G-ASVVVSSRKQKNVDEAVVKLKA-----RGIEVIGVVCHVSNGQQRKNLINQ   82 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~   82 (255)
                      .+.|.|||.|+++|.   +++++++. + .+|.++..+++-.+-.++-+..     ..+++.++..|-..      .   
T Consensus        74 ~~p~~vLiiGgG~G~---~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~------~---  141 (274)
T d1iy9a_          74 PNPEHVLVVGGGDGG---VIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFM------H---  141 (274)
T ss_dssp             SSCCEEEEESCTTCH---HHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHH------H---
T ss_pred             CCcceEEecCCCCcH---HHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHH------H---
Confidence            456899999988773   44555554 4 4699999998766654444321     25688888877631      1   


Q ss_pred             HHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           83 TIEKFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                      +.+.-.+.|++|...--.. ..+..-.+.+               +.+.+...|+++|.++.=
T Consensus       142 l~~~~~~yDvIi~D~~~p~-~~~~~L~t~e---------------Fy~~~~~~L~~~Gv~v~q  188 (274)
T d1iy9a_         142 IAKSENQYDVIMVDSTEPV-GPAVNLFTKG---------------FYAGIAKALKEDGIFVAQ  188 (274)
T ss_dssp             HHTCCSCEEEEEESCSSCC-SCCCCCSTTH---------------HHHHHHHHEEEEEEEEEE
T ss_pred             HhhcCCCCCEEEEcCCCCC-CcchhhccHH---------------HHHHHHhhcCCCceEEEe
Confidence            2222247999998864221 1121222333               444456677877776654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.13  E-value=0.35  Score=36.65  Aligned_cols=33  Identities=15%  Similarity=0.196  Sum_probs=29.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      .|+|.||+ -.|..+|..|+++|.+|+++.++++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            48888876 7899999999999999999998864

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.99  E-value=0.38  Score=35.17  Aligned_cols=34  Identities=21%  Similarity=0.413  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCCchHH-----HHHHHHHHcCCeEEEEeCC
Q 025273           12 GKVAIVTASTQGIGF-----GIAERLGLEGASVVVSSRK   45 (255)
Q Consensus        12 ~k~vlItGa~~giG~-----~~a~~l~~~G~~V~~~~r~   45 (255)
                      +|++.|+|+-||.|.     .++..|++.|.+|.++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            689999999999987     4678888999999999865

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=85.99  E-value=0.43  Score=34.12  Aligned_cols=38  Identities=16%  Similarity=0.160  Sum_probs=30.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAV   53 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   53 (255)
                      ++.|.| .|-+|..+|..|+ +|++|+..|.+++..+.+.
T Consensus         2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHh
Confidence            466665 7999999997664 7999999999987665543

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=85.90  E-value=1.4  Score=31.00  Aligned_cols=78  Identities=9%  Similarity=-0.003  Sum_probs=52.4

Q ss_pred             cCCCCEEE-EEcCCCchHHHHHHHHHHcCCe-EEEEeCCchhHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273            9 RFQGKVAI-VTASTQGIGFGIAERLGLEGAS-VVVSSRKQKNVDEAVVKLKAR-GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus         9 ~l~~k~vl-ItGa~~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .+.++++| +..|+|.+|.+    .+++|+. |+.++.+....+.+++.+... .....++.+|+.         +.+..
T Consensus        41 ~~~~~~vLDlfaGsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~---------~~l~~  107 (183)
T d2fpoa1          41 VIVDAQCLDCFAGSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM---------SFLAQ  107 (183)
T ss_dssp             HHTTCEEEETTCTTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH---------HHHSS
T ss_pred             ccchhhhhhhhccccceeee----EEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeeccc---------ccccc
Confidence            36678888 44456666654    4568875 999999999988888777655 346677776632         12222


Q ss_pred             HhCCCCEEEEcCCC
Q 025273           86 KFGKIDVVVSNAAA   99 (255)
Q Consensus        86 ~~g~~d~lv~~ag~   99 (255)
                      .....|+++..+-+
T Consensus       108 ~~~~fDlIf~DPPY  121 (183)
T d2fpoa1         108 KGTPHNIVFVDPPF  121 (183)
T ss_dssp             CCCCEEEEEECCSS
T ss_pred             cccccCEEEEcCcc
Confidence            23478999988654

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=85.87  E-value=1.8  Score=28.84  Aligned_cols=86  Identities=14%  Similarity=0.042  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCC---CchHHHHHHHHHHcCCeEEEEeCCchh--HH--HHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 025273           11 QGKVAIVTAST---QGIGFGIAERLGLEGASVVVSSRKQKN--VD--EAVVKLKARGIEVIGVVCHVSNGQQRKNLINQT   83 (255)
Q Consensus        11 ~~k~vlItGa~---~giG~~~a~~l~~~G~~V~~~~r~~~~--~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   83 (255)
                      +.|.+.|.|+|   +..|..+.+.|.+.|++++.+--+...  ..  .....+.+....+..+.+ ....+.+.++++++
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v-~~p~~~v~~~v~~~   90 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV-FRPPSALMDHLPEV   90 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE-CSCHHHHTTTHHHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEE-eccHHHHHHHHHHH
Confidence            56899999998   569999999999999998887544321  00  011111111112221111 23466677777776


Q ss_pred             HHHhCCCCEEEEcCCC
Q 025273           84 IEKFGKIDVVVSNAAA   99 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~   99 (255)
                      .+.  .+..++...|.
T Consensus        91 ~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          91 LAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHH--CCSCEEECTTC
T ss_pred             Hhh--CCCeEEEecCc
Confidence            655  35566666554

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.72  E-value=0.83  Score=34.37  Aligned_cols=71  Identities=10%  Similarity=0.043  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCC-CchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTAST-QGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        11 ~~k~vlItGa~-~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      +|++||-.||+ |.++..++    ++| .+|+.++.++...+.+.+.+...  ..++.+++.|..+...           
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a----~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~~-----------  171 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIA----VYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-----------  171 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHH----HHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-----------
T ss_pred             CccEEEECcceEcHHHHHHH----HhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhcc-----------
Confidence            58899988865 55555544    345 58999999999988887777655  4579999999865321           


Q ss_pred             hCCCCEEEEc
Q 025273           87 FGKIDVVVSN   96 (255)
Q Consensus        87 ~g~~d~lv~~   96 (255)
                      .+..|.+|.+
T Consensus       172 ~~~~D~Ii~~  181 (260)
T d2frna1         172 ENIADRILMG  181 (260)
T ss_dssp             CSCEEEEEEC
T ss_pred             CCCCCEEEEC
Confidence            1357888765

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.49  E-value=2  Score=31.23  Aligned_cols=107  Identities=15%  Similarity=0.131  Sum_probs=65.0

Q ss_pred             CCCCEEEEEcCCCchH-HHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIG-FGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEK   86 (255)
Q Consensus        10 l~~k~vlItGa~~giG-~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   86 (255)
                      .+.|+||=.|...|.. ..+++.+ ..+.+|+.++.+++..+..++.+...  ..++.++..|..  +.+.+++..-  .
T Consensus        58 ~~~k~vLEiGt~~GyStl~~a~al-~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~--e~l~~~~~~~--~  132 (219)
T d2avda1          58 IQAKKALDLGTFTGYSALALALAL-PADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPAL--ETLDELLAAG--E  132 (219)
T ss_dssp             TTCCEEEEECCTTSHHHHHHHTTS-CTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHH--HHHHHHHHTT--C
T ss_pred             cCCCeEEEEechhhHHHHHHHHhC-CCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehh--hcchhhhhhc--c
Confidence            4568999998765543 3333443 34568999999998877777777654  456777666642  2233332211  1


Q ss_pred             hCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEE
Q 025273           87 FGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVL  144 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~  144 (255)
                      .+++|.++..+.-..            .           ....+.+.++++++|.||+
T Consensus       133 ~~~fD~ifiD~dk~~------------y-----------~~~~~~~~~lL~~GGvii~  167 (219)
T d2avda1         133 AGTFDVAVVDADKEN------------C-----------SAYYERCLQLLRPGGILAV  167 (219)
T ss_dssp             TTCEEEEEECSCSTT------------H-----------HHHHHHHHHHEEEEEEEEE
T ss_pred             cCCccEEEEeCCHHH------------H-----------HHHHHHHHHHhcCCcEEEE
Confidence            247899998765321            0           1123445678888777766

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=85.46  E-value=0.58  Score=31.96  Aligned_cols=35  Identities=17%  Similarity=-0.008  Sum_probs=26.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcC----CeEEEEeCCch
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEG----ASVVVSSRKQK   47 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G----~~V~~~~r~~~   47 (255)
                      |+|-|.||||-+|+.+.+.|+++.    .++++..++..
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            468899999999999999887753    33666665543

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=85.40  E-value=2.2  Score=31.24  Aligned_cols=102  Identities=13%  Similarity=-0.031  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLE-GASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .|++||=.|++.|   .++..|+++ |+.|+.++-++...+...+.....  ..++.+...|+.+...           -
T Consensus        33 pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~~-----------~   98 (245)
T d1nkva_          33 PGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-----------N   98 (245)
T ss_dssp             TTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-----------S
T ss_pred             CCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhccc-----------c
Confidence            3789998998777   234556554 899999999988887766665555  3579999999875311           1


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ++.|.+++.-.... ..     +.              -.+++.+.+.++++|++++.-
T Consensus        99 ~~fD~v~~~~~~~~-~~-----d~--------------~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          99 EKCDVAACVGATWI-AG-----GF--------------AGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             SCEEEEEEESCGGG-TS-----SS--------------HHHHHHHTTSEEEEEEEEEEE
T ss_pred             CceeEEEEEehhhc-cC-----CH--------------HHHHHHHHHHcCcCcEEEEEe
Confidence            37898887644322 11     11              124556677888888887743

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=85.19  E-value=0.44  Score=35.83  Aligned_cols=31  Identities=16%  Similarity=0.310  Sum_probs=26.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      |+|.| +|-.|..+|.+|+++|++|+++++..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            67776 46779999999999999999998864

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=85.04  E-value=4.3  Score=30.85  Aligned_cols=53  Identities=19%  Similarity=0.080  Sum_probs=33.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVV   67 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   67 (255)
                      ..+|+..+|..|.+++..-+..|.+++++-...... ...+.+...+.++..+.
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~-~k~~~l~~~Ga~vi~~~  122 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPE-AKVAATKGYGGQVIMYD  122 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCH-HHHHHHHHTTCEEEEEC
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeecccccccH-HHHHHHHHcCCcEEecc
Confidence            358888899999999999988888854443222221 22334455566665543

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=85.03  E-value=4.2  Score=31.17  Aligned_cols=76  Identities=12%  Similarity=0.093  Sum_probs=48.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEeCCchhHHHHHHHHHh------cCCeEEEEEecCCCHHHHHHHHH
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLE--GASVVVSSRKQKNVDEAVVKLKA------RGIEVIGVVCHVSNGQQRKNLIN   81 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~   81 (255)
                      .+.|+|||.|+++|   .+++++++.  ..+|.++..+++-.+-.++.+..      ...++.++..|-.      +++ 
T Consensus        76 ~~pk~VLiiG~G~G---~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~------~~l-  145 (312)
T d1uira_          76 PEPKRVLIVGGGEG---ATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDAR------AYL-  145 (312)
T ss_dssp             SCCCEEEEEECTTS---HHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHH------HHH-
T ss_pred             CCcceEEEeCCCch---HHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHH------HHh-
Confidence            45689999998766   344555544  35799999998766655544422      2468888776643      122 


Q ss_pred             HHHHHhCCCCEEEEcC
Q 025273           82 QTIEKFGKIDVVVSNA   97 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~a   97 (255)
                        .+.-.+.|++|...
T Consensus       146 --~~~~~~yDvIi~D~  159 (312)
T d1uira_         146 --ERTEERYDVVIIDL  159 (312)
T ss_dssp             --HHCCCCEEEEEEEC
T ss_pred             --hhcCCcccEEEEeC
Confidence              22335799999664

>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At5g11950
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.99  E-value=3.3  Score=29.00  Aligned_cols=30  Identities=20%  Similarity=0.128  Sum_probs=18.2

Q ss_pred             EEEEEcCCC-chHHHHHHHHHHcCCeEEEEe
Q 025273           14 VAIVTASTQ-GIGFGIAERLGLEGASVVVSS   43 (255)
Q Consensus        14 ~vlItGa~~-giG~~~a~~l~~~G~~V~~~~   43 (255)
                      .-+|+||+. |+=.++++...+.|.+|+.+.
T Consensus        35 ~~lv~GGG~~GlMga~a~ga~~~gg~viGv~   65 (181)
T d1ydhb_          35 IDLVYGGGSVGLMGLISRRVYEGGLHVLGII   65 (181)
T ss_dssp             CEEEECCCSSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEECCCchHHHHHHHHhHhhcCCcccccc
Confidence            345566443 776677777766666665553

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=84.99  E-value=3.7  Score=28.60  Aligned_cols=63  Identities=17%  Similarity=0.164  Sum_probs=50.3

Q ss_pred             HcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEcCCC
Q 025273           34 LEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDVVVSNAAA   99 (255)
Q Consensus        34 ~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      +.|.++++++.+....+.+.+.+...+.++..+..++.+.+- ++.++++++  |.+++||...-.
T Consensus        29 ~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~eR-~~~l~~F~~--G~~~vLVaT~v~   91 (174)
T d1c4oa2          29 ARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKR-QALIRDLRL--GHYDCLVGINLL   91 (174)
T ss_dssp             HTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHH-HHHHHHHHT--TSCSEEEESCCC
T ss_pred             hcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHHH-HHHHHHHHC--CCeEEEEeeeee
Confidence            468899999999999999999999999999999999985443 445555543  689999987644

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.94  E-value=1.7  Score=28.85  Aligned_cols=35  Identities=20%  Similarity=0.153  Sum_probs=27.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHH----cCCeEEEEeCCch
Q 025273           12 GKVAIVTASTQGIGFGIAERLGL----EGASVVVSSRKQK   47 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~----~G~~V~~~~r~~~   47 (255)
                      .|+++|.|| |.+|.++|..|++    .|.+|.++.+...
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            578888865 8899999888863    5899999887643

>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Positive regulator of the amidase operon AmiR
domain: Positive regulator of the amidase operon AmiR
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.57  E-value=0.55  Score=33.17  Aligned_cols=81  Identities=11%  Similarity=0.076  Sum_probs=54.1

Q ss_pred             ccccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHH
Q 025273            6 MAKRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNG-QQRKNLINQTI   84 (255)
Q Consensus         6 ~~~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~   84 (255)
                      +...+++.+|||.=-.....+.+...|.+.|++|..+....+.++        ....+  +.+|+.-+ .... .+....
T Consensus         5 ~~~~l~~~~iLvvdd~~~~~~~l~~~L~~~G~~v~~~~~~~~al~--------~~~Dl--vl~D~~mp~~~~~-~~~~~~   73 (189)
T d1qo0d_           5 LLGSLRELQVLVLNPPGEVSDALVLQLIRIGCSVRQCWPPPEAFD--------VPVDV--VFTSIFQNRHHDE-IAALLA   73 (189)
T ss_dssp             HHHTGGGCEEEEESCTTHHHHHHHHHHHHHTCEEEEECSCCSSCS--------SCCSE--EEEECCSSTHHHH-HHHHHH
T ss_pred             HHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCcceecCCHHHhcc--------CCCCE--EEEcCCCCCcHHH-HHHHHH
Confidence            445688999999999999999999999999999999876665442        12344  44455322 2223 233444


Q ss_pred             HHhCCCCEEEEcC
Q 025273           85 EKFGKIDVVVSNA   97 (255)
Q Consensus        85 ~~~g~~d~lv~~a   97 (255)
                      ...+.+-+++..+
T Consensus        74 ~~~p~~pvI~lta   86 (189)
T d1qo0d_          74 AGTPRTTLVALVE   86 (189)
T ss_dssp             HSCTTCEEEEEEC
T ss_pred             HcCCCCCEEEEec
Confidence            5555566666543

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=84.54  E-value=2.4  Score=28.94  Aligned_cols=82  Identities=13%  Similarity=0.233  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCC---CHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVS---NGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~   87 (255)
                      +|+++.|.+.+||.|--++-.+.+.|.++.-.  +++..+++.+.+...  ...--.+|++   +.+...+.++.+.+. 
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~~~t~~~L~~~lp~~--~~~~NPlD~~~~~~~~~~~~~l~~~~~d-   76 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--EEKTIEELRSFLPPM--AAVKNPVDMIASARGEDYYRTAKLLLQD-   76 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--CHHHHHHHHHHSCTT--CEESSEEECCTTCCHHHHHHHHHHHHHS-
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--CHHHHHHHHHhCCCc--ccCCCcccccCCCCHHHHHHHHHHHHcC-
Confidence            68999999999999999999999999766433  444434444433221  1111234553   455566666555432 


Q ss_pred             CCCCEEEEcC
Q 025273           88 GKIDVVVSNA   97 (255)
Q Consensus        88 g~~d~lv~~a   97 (255)
                      +.+|.++...
T Consensus        77 ~~vd~v~v~~   86 (163)
T d2csua3          77 PNVDMLIAIC   86 (163)
T ss_dssp             TTCSEEEEEE
T ss_pred             CCcCEEEEee
Confidence            5788865443

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=84.52  E-value=2  Score=30.36  Aligned_cols=83  Identities=7%  Similarity=0.005  Sum_probs=42.8

Q ss_pred             CCCCEEEEEcCCCc-------------hHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 025273           10 FQGKVAIVTASTQG-------------IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQR   76 (255)
Q Consensus        10 l~~k~vlItGa~~g-------------iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   76 (255)
                      +++|++++.|=|-.             -+..+.+.|-..+.+|+=.+..-.........                     
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~---------------------   59 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND---------------------   59 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS---------------------
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh---------------------
Confidence            46899999998743             33444444444566665444443332221110                     


Q ss_pred             HHHHHHHHHHhCCCCEEEEcCCCCCCCCCccCCCHHHHH
Q 025273           77 KNLINQTIEKFGKIDVVVSNAAANPSVDSILQTKESVLD  115 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~  115 (255)
                       ..+.++...+.+.|++|...|.... ......+.+.+.
T Consensus        60 -~~~~~~~~~~~~~D~vvi~~G~ND~-~~~~~~~~~~~~   96 (208)
T d2o14a2          60 -GQLEAILKYIKPGDYFMLQLGINDT-NPKHKESEAEFK   96 (208)
T ss_dssp             -SHHHHHHTTCCTTCEEEEECCTGGG-CGGGCCCHHHHH
T ss_pred             -hhHHHHHHhcCCCCEEEEEcCCCcc-cccccccHHHHH
Confidence             0122223334467999988887652 222334455443

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.30  E-value=0.43  Score=35.54  Aligned_cols=37  Identities=24%  Similarity=0.210  Sum_probs=29.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHH
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEA   52 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~   52 (255)
                      |+|.|| |.-|..+|..|+++|.+|+++.++.....++
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~k~   43 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI   43 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCCce
Confidence            788875 4558888999999999999999987654443

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=84.15  E-value=0.17  Score=34.80  Aligned_cols=37  Identities=14%  Similarity=-0.111  Sum_probs=26.5

Q ss_pred             CCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHH
Q 025273           20 STQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKL   56 (255)
Q Consensus        20 a~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (255)
                      |+|.+|+++++.|.+.+..+.+.+|+.++++.+.++.
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            5788999999988665444567899998888776654

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.04  E-value=1.4  Score=32.07  Aligned_cols=108  Identities=9%  Similarity=0.012  Sum_probs=66.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKF-   87 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   87 (255)
                      .+|++||=.|++.|+   .+..+++++ .+|++++.++..++.+.+.....+..+..+..|..   .       ....+ 
T Consensus        52 ~~g~~VLdIGcG~G~---~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~-------~~~~~~  118 (229)
T d1zx0a1          52 SKGGRVLEVGFGMAI---AASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWE---D-------VAPTLP  118 (229)
T ss_dssp             TTCEEEEEECCTTSH---HHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHH---H-------HGGGSC
T ss_pred             cCCCeEEEeeccchH---HHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhccccccccccccc---c-------cccccc
Confidence            468899999988884   556677764 67999999998888777766655666666655421   1       11111 


Q ss_pred             -CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEE
Q 025273           88 -GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLI  145 (255)
Q Consensus        88 -g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~i  145 (255)
                       ++.|.++..+-... ..   .....           -.-.+.+.+.+.|+++|.+++.
T Consensus       119 ~~~fD~i~fD~~~~~-~~---~~~~~-----------~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         119 DGHFDGILYDTYPLS-EE---TWHTH-----------QFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             TTCEEEEEECCCCCB-GG---GTTTH-----------HHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cccccceeecccccc-cc---ccccc-----------CHHHHHHHHHHHcCCCcEEEEE
Confidence             47888876543321 00   01011           1112445566778888888764

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=84.01  E-value=0.95  Score=34.18  Aligned_cols=99  Identities=18%  Similarity=0.235  Sum_probs=63.0

Q ss_pred             CCCEEEEEcCCCc-hHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 025273           11 QGKVAIVTASTQG-IGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARG--IEVIGVVCHVSNGQQRKNLINQTIEKF   87 (255)
Q Consensus        11 ~~k~vlItGa~~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   87 (255)
                      .|.+||=.|+++| +...+++.+. .+.+|+.++.+++.++..++.+...+  ..+.+...|+...      +.     .
T Consensus       103 pG~~VLDiG~GsG~lt~~lA~~~~-~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~~~------~~-----~  170 (266)
T d1o54a_         103 EGDRIIDTGVGSGAMCAVLARAVG-SSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG------FD-----E  170 (266)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHTT-TTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC------CS-----C
T ss_pred             CCCEEEECCCCCCHHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecccccc------cc-----c
Confidence            4789999997665 4444444332 34589999999999888888877653  3566555554321      00     1


Q ss_pred             CCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           88 GKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                      ..+|.+++...     .                    ++.+++.+.+.|+++|+++..+
T Consensus       171 ~~~D~V~~d~p-----~--------------------p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         171 KDVDALFLDVP-----D--------------------PWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             CSEEEEEECCS-----C--------------------GGGTHHHHHHHEEEEEEEEEEE
T ss_pred             cceeeeEecCC-----C--------------------HHHHHHHHHhhcCCCCEEEEEe
Confidence            25787776432     1                    1234566677888999988654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=83.98  E-value=3.3  Score=26.36  Aligned_cols=35  Identities=20%  Similarity=0.153  Sum_probs=27.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHc---CCeEEEEeCCch
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLE---GASVVVSSRKQK   47 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~---G~~V~~~~r~~~   47 (255)
                      .|+++|.|| |.+|.++|..|.+.   |.+|.++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            578888875 78999999877654   889999988743

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.75  E-value=0.44  Score=36.10  Aligned_cols=100  Identities=13%  Similarity=0.189  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCC-CchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025273           11 QGKVAIVTAST-QGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR----GIEVIGVVCHVSNGQQRKNLINQTIE   85 (255)
Q Consensus        11 ~~k~vlItGa~-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   85 (255)
                      .|.+||=.|++ |.+..++++.+...| +|+.++.+++.++..++.+...    ..++.+...|+.+.+- .        
T Consensus        96 PG~~VLE~G~GsG~lt~~La~~vgp~G-~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~-~--------  165 (264)
T d1i9ga_          96 PGARVLEAGAGSGALTLSLLRAVGPAG-QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL-P--------  165 (264)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTS-EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC-C--------
T ss_pred             CCCEEEecCcCCcHHHHHHHHhhCCCc-EEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecccccccc-c--------
Confidence            37899988865 555666666665444 7999999999888877766542    3578888878754211 0        


Q ss_pred             HhCCCCEEEEcCCCCCCCCCccCCCHHHHHHHHHHHhHHHHHHHHHHhhcccCCCeEEEEc
Q 025273           86 KFGKIDVVVSNAAANPSVDSILQTKESVLDKLWDINVKSSILLLQDAAPHLQKGSSVVLIS  146 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~is  146 (255)
                       .+.+|.++....     .                    ++..+..+.+.|+++|+++..+
T Consensus       166 -~~~fDaV~ldlp-----~--------------------P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         166 -DGSVDRAVLDML-----A--------------------PWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             -TTCEEEEEEESS-----C--------------------GGGGHHHHHHHEEEEEEEEEEE
T ss_pred             -CCCcceEEEecC-----C--------------------HHHHHHHHHhccCCCCEEEEEe
Confidence             136888775421     1                    1223455667788888887654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.53  E-value=0.51  Score=32.90  Aligned_cols=31  Identities=16%  Similarity=0.117  Sum_probs=24.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVS   42 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~   42 (255)
                      ++++|+|.| +|.+|.+++..|.+.|.+|.++
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEE
Confidence            467788886 5789999999999999875444

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.46  E-value=2.2  Score=30.51  Aligned_cols=28  Identities=18%  Similarity=0.106  Sum_probs=22.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEE
Q 025273           14 VAIVTASTQGIGFGIAERLGLEGASVVVS   42 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~G~~V~~~   42 (255)
                      ++++. |++..|..+.+.|.+.|++|+.+
T Consensus         2 kiv~~-~~~~~g~~~l~~L~~~g~~I~~V   29 (203)
T d2blna2           2 KTVVF-AYHDMGCLGIEALLAAGYEISAI   29 (203)
T ss_dssp             EEEEE-ECHHHHHHHHHHHHHTTCEEEEE
T ss_pred             eEEEE-ecCHHHHHHHHHHHHCCCCEEEE
Confidence            45666 46779999999999999997554

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.43  E-value=0.5  Score=34.43  Aligned_cols=34  Identities=18%  Similarity=0.264  Sum_probs=28.7

Q ss_pred             CEEEEEcCCCchHH-----HHHHHHHHcCCeEEEEeCCc
Q 025273           13 KVAIVTASTQGIGF-----GIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        13 k~vlItGa~~giG~-----~~a~~l~~~G~~V~~~~r~~   46 (255)
                      |++.|+++-||.|.     ++|..|+++|.+|.++|-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            78999999999886     56778889999999998663

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=83.31  E-value=2.3  Score=26.06  Aligned_cols=69  Identities=19%  Similarity=0.171  Sum_probs=45.5

Q ss_pred             CEEEEEcCCCchHH-HHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 025273           13 KVAIVTASTQGIGF-GIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKID   91 (255)
Q Consensus        13 k~vlItGa~~giG~-~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d   91 (255)
                      +++-+.|- +|+|- ++|+.|+++|+.|...|+...+   ..+.+.+.+.+++. .-|..   .+           ...|
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~---~t~~L~~~Gi~i~~-gh~~~---~i-----------~~~d   62 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETE---RTAYLRKLGIPIFV-PHSAD---NW-----------YDPD   62 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHTTCCEES-SCCTT---SC-----------CCCS
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCCh---hHHHHHHCCCeEEe-eeccc---cc-----------CCCC
Confidence            45666654 44553 6899999999999999998654   33346666655542 11221   11           3689


Q ss_pred             EEEEcCCCC
Q 025273           92 VVVSNAAAN  100 (255)
Q Consensus        92 ~lv~~ag~~  100 (255)
                      .+|...++.
T Consensus        63 ~vV~SsAI~   71 (89)
T d1j6ua1          63 LVIKTPAVR   71 (89)
T ss_dssp             EEEECTTCC
T ss_pred             EEEEecCcC
Confidence            999998874

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.15  E-value=0.32  Score=36.71  Aligned_cols=49  Identities=12%  Similarity=-0.035  Sum_probs=34.9

Q ss_pred             ccCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHh
Q 025273            8 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKA   58 (255)
Q Consensus         8 ~~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   58 (255)
                      ...+|+++|=.|++.|+-.  ...+.+.+.+|+++|-++...+.+++.+.+
T Consensus        51 g~~~g~~vLDiGcG~g~~~--~~~~~~~~~~v~~~D~S~~~i~~~~~~~~~   99 (263)
T d2g72a1          51 GEVSGRTLIDIGSGPTVYQ--LLSACSHFEDITMTDFLEVNRQELGRWLQE   99 (263)
T ss_dssp             SCSCCSEEEEETCTTCCGG--GTTGGGGCSEEEEECSCHHHHHHHHHHHTT
T ss_pred             CCCCCcEEEEeccCCCHHH--HHHhcccCCeEEEEeCCHHHHHHHHHHHhc
Confidence            3467899999999888542  222334456799999998888877665543

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=83.08  E-value=0.63  Score=34.20  Aligned_cols=34  Identities=26%  Similarity=0.207  Sum_probs=28.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhH
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNV   49 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~   49 (255)
                      |+|.||+ --|..+|..|+++|++|+++.++....
T Consensus         5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~~~g   38 (251)
T d2i0za1           5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGNKLG   38 (251)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence            7888765 578899999999999999999876543

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=83.02  E-value=1  Score=32.73  Aligned_cols=70  Identities=14%  Similarity=0.139  Sum_probs=49.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGK   89 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   89 (255)
                      +++++||=.|++.|   .+++.|+++|++|+.++.+++.++..++..   ...+.++..|+.+.+-           -++
T Consensus        19 ~~~~~VLDiGcG~G---~~~~~l~~~g~~v~giD~s~~~i~~a~~~~---~~~~~~~~~~~~~~~~-----------~~~   81 (225)
T d2p7ia1          19 FRPGNLLELGSFKG---DFTSRLQEHFNDITCVEASEEAISHAQGRL---KDGITYIHSRFEDAQL-----------PRR   81 (225)
T ss_dssp             CCSSCEEEESCTTS---HHHHHHTTTCSCEEEEESCHHHHHHHHHHS---CSCEEEEESCGGGCCC-----------SSC
T ss_pred             CCCCcEEEEeCCCc---HHHHHHHHcCCeEEEEeCcHHHhhhhhccc---cccccccccccccccc-----------ccc
Confidence            67889999998776   345678888999999999988777665443   3357777777643210           136


Q ss_pred             CCEEEEc
Q 025273           90 IDVVVSN   96 (255)
Q Consensus        90 ~d~lv~~   96 (255)
                      .|+++..
T Consensus        82 fD~I~~~   88 (225)
T d2p7ia1          82 YDNIVLT   88 (225)
T ss_dssp             EEEEEEE
T ss_pred             ccccccc
Confidence            8988865

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.68  E-value=2  Score=31.88  Aligned_cols=83  Identities=12%  Similarity=-0.035  Sum_probs=57.1

Q ss_pred             CCEEEEEc-CCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH-Hh
Q 025273           12 GKVAIVTA-STQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKAR--GIEVIGVVCHVSNGQQRKNLINQTIE-KF   87 (255)
Q Consensus        12 ~k~vlItG-a~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~-~~   87 (255)
                      ..++|=.| |+|-|+..+++++  .+++|++++.+++.++-.++-+...  ..++.++..|..+.     ++..+.. ..
T Consensus        62 ~~~~LDiGtGsg~I~~~l~~~~--~~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~-----~~~~~~~~~~  134 (250)
T d2h00a1          62 LRRGIDIGTGASCIYPLLGATL--NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL-----LMDALKEESE  134 (250)
T ss_dssp             CCEEEEESCTTTTHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS-----STTTSTTCCS
T ss_pred             cceEEEeCCCchHHHHHHHHhC--CCccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHh-----hhhhhhhccc
Confidence            35788777 5677999888876  3789999999999988877777665  45777777654321     0111111 12


Q ss_pred             CCCCEEEEcCCCCC
Q 025273           88 GKIDVVVSNAAANP  101 (255)
Q Consensus        88 g~~d~lv~~ag~~~  101 (255)
                      ++.|++|+|.-+..
T Consensus       135 ~~fD~ivsNPPY~~  148 (250)
T d2h00a1         135 IIYDFCMCNPPFFA  148 (250)
T ss_dssp             CCBSEEEECCCCC-
T ss_pred             CceeEEEecCcccc
Confidence            47999999998864

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=82.66  E-value=0.31  Score=34.57  Aligned_cols=36  Identities=14%  Similarity=0.123  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           11 QGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        11 ~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      +++.|+|.||+- .|...|..+++.|.+|+++.+...
T Consensus         4 k~~dVvIIGGGp-aGl~AA~~~ar~g~~v~iie~~~~   39 (190)
T d1trba1           4 KHSKLLILGSGP-AGYTAAVYAARANLQPVLITGMEK   39 (190)
T ss_dssp             EEEEEEEECCSH-HHHHHHHHHHTTTCCCEEECCSST
T ss_pred             CCCcEEEECCCH-HHHHHHHHHHHcCCceEEEEeecc
Confidence            356789998654 789999999999999999987643

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.29  E-value=0.61  Score=37.24  Aligned_cols=32  Identities=16%  Similarity=0.307  Sum_probs=26.3

Q ss_pred             EEEEcCCCchHHHHHHHHHH------cCCeEEEEeCCch
Q 025273           15 AIVTASTQGIGFGIAERLGL------EGASVVVSSRKQK   47 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~------~G~~V~~~~r~~~   47 (255)
                      |+|.||+- -|...|..|++      +|.+|+++.+...
T Consensus        35 ViIVGgGP-AGlsaA~~LA~l~~~~~~Gl~VlllEK~~~   72 (380)
T d2gmha1          35 VVIVGAGP-AGLSAATRLKQLAAQHEKDLRVCLVEKAAH   72 (380)
T ss_dssp             EEEECCSH-HHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred             EEEECCCH-HHHHHHHHHHhhhhhhcCCCEEEEEcCCCC
Confidence            88998754 48888898887      7999999998753

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.23  E-value=0.59  Score=33.90  Aligned_cols=32  Identities=13%  Similarity=0.239  Sum_probs=27.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCch
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~   47 (255)
                      |+|.||+.. |...|.++++.|.+|+++.+...
T Consensus         8 viVIG~GpA-Gl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           8 VVIIGGGPA-GYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCcEEEEEecCC
Confidence            788988554 99999999999999999987643

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.09  E-value=0.7  Score=33.21  Aligned_cols=31  Identities=16%  Similarity=0.203  Sum_probs=27.4

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      ++|.|| |..|...|..+++.|.+|+++.++.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            688887 7789999999999999999998864

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.95  E-value=0.77  Score=32.31  Aligned_cols=42  Identities=17%  Similarity=0.152  Sum_probs=30.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEE-EEeCCchhHHHHHHHH
Q 025273           14 VAIVTASTQGIGFGIAERLGLE-GASVV-VSSRKQKNVDEAVVKL   56 (255)
Q Consensus        14 ~vlItGa~~giG~~~a~~l~~~-G~~V~-~~~r~~~~~~~~~~~~   56 (255)
                      ++.|.|+ |.+|+..++.|... +++|+ +++++.+.++.+.++.
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~   46 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATAN   46 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhcc
Confidence            4677785 67999999999875 66765 5688887766665543

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=81.74  E-value=0.5  Score=35.47  Aligned_cols=34  Identities=21%  Similarity=0.336  Sum_probs=27.6

Q ss_pred             CEEEEEcCCCchHHH-----HHHHHHHcCCeEEEEeCCch
Q 025273           13 KVAIVTASTQGIGFG-----IAERLGLEGASVVVSSRKQK   47 (255)
Q Consensus        13 k~vlItGa~~giG~~-----~a~~l~~~G~~V~~~~r~~~   47 (255)
                      |++.|+| -||+|..     ++..|+++|++|.++|-+..
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            6788898 8888865     46689999999999998753

>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.38  E-value=4.4  Score=27.54  Aligned_cols=36  Identities=8%  Similarity=0.178  Sum_probs=31.5

Q ss_pred             CCCCEEEEEc-CCCchHHHHHHHHHHcCCeEEEEeCC
Q 025273           10 FQGKVAIVTA-STQGIGFGIAERLGLEGASVVVSSRK   45 (255)
Q Consensus        10 l~~k~vlItG-a~~giG~~~a~~l~~~G~~V~~~~r~   45 (255)
                      |+|+++++.| +.+.+-.++++.+...|+++++++-.
T Consensus         1 l~g~ki~~vGD~~nnV~~Sli~~~~~~g~~i~~~~P~   37 (161)
T d1vlva2           1 LKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPE   37 (161)
T ss_dssp             STTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCG
T ss_pred             CCCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEecch
Confidence            5799999999 55689999999999999999988754

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.32  E-value=1.3  Score=30.51  Aligned_cols=36  Identities=17%  Similarity=0.221  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC
Q 025273           10 FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK   45 (255)
Q Consensus        10 l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~   45 (255)
                      ++|++|++.|-.+.+..++++.|...|+++.+++-.
T Consensus         2 l~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~   37 (163)
T d1pvva2           2 IKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE   37 (163)
T ss_dssp             CTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence            689999999999999999999999999999988754

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=80.93  E-value=2.4  Score=31.01  Aligned_cols=54  Identities=11%  Similarity=0.001  Sum_probs=33.8

Q ss_pred             cccccccCCCCEEEEEcCCCc---hHHHHHHHHHHc--CCeEE-EEeCCchhHHHHHHHH
Q 025273            3 KMKMAKRFQGKVAIVTASTQG---IGFGIAERLGLE--GASVV-VSSRKQKNVDEAVVKL   56 (255)
Q Consensus         3 ~~~~~~~l~~k~vlItGa~~g---iG~~~a~~l~~~--G~~V~-~~~r~~~~~~~~~~~~   56 (255)
                      .|+++..-+.-++.|.|.++.   ++..-...+.+.  +++|+ +++++.+.++...++.
T Consensus         7 ~~~~~~~~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~   66 (237)
T d2nvwa1           7 KLSTVPSSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQL   66 (237)
T ss_dssp             GGGSSGGGCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHT
T ss_pred             ccccCCCCCCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhc
Confidence            344444445567899997653   555555556543  56755 6788887777666654

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=80.78  E-value=0.49  Score=33.62  Aligned_cols=39  Identities=15%  Similarity=0.072  Sum_probs=29.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcC-CeEEEEeCCchhHHH
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEG-ASVVVSSRKQKNVDE   51 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~   51 (255)
                      -+|-|.||||-.|+.+.+.|.++- .++..++.+....+.
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~   45 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQ   45 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSC
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCc
Confidence            469999999999999999999884 456655544444333

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.75  E-value=0.79  Score=34.88  Aligned_cols=33  Identities=21%  Similarity=0.210  Sum_probs=26.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCC
Q 025273           12 GKVAIVTASTQGIGFGIAERLGLEGASVVVSSRK   45 (255)
Q Consensus        12 ~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~   45 (255)
                      .++|+|.||+ -=|..+|.+|+++|++|.++-++
T Consensus         5 ~~kViVIGaG-~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGSG-VSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECCB-HHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECCC-HHHHHHHHHHHhCCCCEEEEeCC
Confidence            4568888764 44889999999999999998544

>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sensor kinase protein RcsC, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.72  E-value=5.5  Score=25.99  Aligned_cols=84  Identities=13%  Similarity=0.056  Sum_probs=59.6

Q ss_pred             cCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 025273            9 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFG   88 (255)
Q Consensus         9 ~l~~k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   88 (255)
                      +-.+.+|||.--...+...+...|.+.|+.|..+....+..    +.+......+.++-..+.+.+.++ +++++++...
T Consensus         5 ~~~~~~ILiVDD~~~~~~~l~~~L~~~g~~v~~a~~g~ea~----~~~~~~~~dlillD~~mP~~dG~e-l~~~ir~~~~   79 (133)
T d2ayxa1           5 DNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDAL----NVLSKNHIDIVLSDVNMPNMDGYR-LTQRIRQLGL   79 (133)
T ss_dssp             CCCCCEEEEEESSHHHHHHHHHHHHHHTSEEEEECCSHHHH----HHHHHSCCSEEEEEESSCSSCCHH-HHHHHHHHHC
T ss_pred             CCCCCEEEEEECCHHHHHHHHHHHHHcCCEEEEECcHHHHH----HHHhccCceEEEEeccCCCCCHHH-HHHHHHHhCC
Confidence            34567899999999999999999999999987665554433    334445567777777776665544 6777777666


Q ss_pred             CCCEEEEcC
Q 025273           89 KIDVVVSNA   97 (255)
Q Consensus        89 ~~d~lv~~a   97 (255)
                      .+-+++..+
T Consensus        80 ~~pii~lt~   88 (133)
T d2ayxa1          80 TLPVIGVTA   88 (133)
T ss_dssp             CSCEEEEES
T ss_pred             CCCEEEEec
Confidence            666666554

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=80.70  E-value=0.84  Score=32.76  Aligned_cols=31  Identities=10%  Similarity=0.127  Sum_probs=26.9

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEeCCc
Q 025273           15 AIVTASTQGIGFGIAERLGLEGASVVVSSRKQ   46 (255)
Q Consensus        15 vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~   46 (255)
                      |+|.|| |-.|...|..+++.|.+|+++.++.
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            788887 4569999999999999999998764

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.41  E-value=5.4  Score=25.63  Aligned_cols=80  Identities=13%  Similarity=0.158  Sum_probs=52.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEeCCchhHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Q 025273           13 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKNLINQTIEKFGKIDV   92 (255)
Q Consensus        13 k~vlItGa~~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~d~   92 (255)
                      .+|||.=-...+...+.+.|.+.|++|..+....+..    +.+......+.++-..+-+.+. -++++++++..+.+-+
T Consensus         4 ~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~----~~l~~~~~dlii~D~~mp~~~G-~el~~~l~~~~~~~pi   78 (123)
T d1krwa_           4 GIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVL----AALASKTPDVLLSDIRMPGMDG-LALLKQIKQRHPMLPV   78 (123)
T ss_dssp             CEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHHH----HHHTTCCCSEEEECCSSSSSTT-HHHHHHHHHHSSSCCE
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHHH----HHHHhCCCCEEEehhhcCCchH-HHHHHHHHHhCCCCeE
Confidence            4799999999999999999999999998765554433    3333333444443333333334 3467778777666666


Q ss_pred             EEEcC
Q 025273           93 VVSNA   97 (255)
Q Consensus        93 lv~~a   97 (255)
                      ++..+
T Consensus        79 I~~t~   83 (123)
T d1krwa_          79 IIMTA   83 (123)
T ss_dssp             EESCC
T ss_pred             EEEec
Confidence            66443