Query 025274
Match_columns 255
No_of_seqs 195 out of 1490
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 07:05:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025274.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025274hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jov_A HI1317; hypothetical pr 100.0 2E-39 6.8E-44 288.6 18.2 194 11-229 10-204 (270)
2 2hta_A Putative enzyme related 100.0 7.5E-38 2.5E-42 283.1 21.4 200 9-223 28-229 (309)
3 2cir_A Hexose-6-phosphate muta 100.0 4.1E-38 1.4E-42 282.9 18.6 193 21-223 5-209 (297)
4 3k25_A SLR1438 protein; struct 100.0 1.3E-37 4.5E-42 279.2 20.4 198 14-223 2-213 (289)
5 3q1n_A Galactose mutarotase re 100.0 2.1E-30 7.2E-35 232.9 16.3 136 25-178 2-149 (294)
6 3dcd_A Galactose mutarotase re 100.0 2.2E-30 7.4E-35 234.3 15.6 137 25-179 2-150 (307)
7 3mwx_A Aldose 1-epimerase; str 100.0 8.8E-30 3E-34 231.7 10.9 159 19-187 10-192 (326)
8 3nre_A Aldose 1-epimerase; str 100.0 9.2E-29 3.1E-33 222.1 16.5 148 22-195 1-169 (291)
9 3os7_A Galactose mutarotase-li 100.0 2.1E-28 7.2E-33 224.1 15.7 159 19-187 14-205 (341)
10 1yga_A Hypothetical 37.9 kDa p 99.9 3.3E-27 1.1E-31 215.9 16.9 169 18-195 5-204 (342)
11 1snz_A Aldose 1-epimerase; mut 99.9 6.6E-25 2.3E-29 201.0 15.5 155 22-195 20-205 (344)
12 1nsx_A Galactose mutarotase; e 99.9 4.3E-23 1.5E-27 189.4 12.1 145 22-179 11-177 (347)
13 1lur_A Aldose 1-epimerase; vit 99.9 6.4E-23 2.2E-27 187.6 10.6 151 20-186 10-189 (339)
14 3imh_A Galactose-1-epimerase; 99.9 1.6E-21 5.4E-26 178.4 16.0 149 23-184 18-188 (338)
15 1z45_A GAL10 bifunctional prot 99.9 2.8E-21 9.4E-26 190.8 13.7 156 21-185 371-555 (699)
16 3ty1_A Hypothetical aldose 1-e 99.6 3.7E-15 1.3E-19 138.4 12.2 158 9-178 30-217 (384)
17 3bs6_A Inner membrane protein 94.7 0.46 1.6E-05 41.3 12.6 125 24-169 4-137 (280)
18 3blc_A Inner membrane protein 93.3 1.2 4E-05 39.7 12.5 123 24-167 35-166 (330)
19 4ep8_B Urease subunit beta; al 79.2 1.8 6.2E-05 32.0 3.6 31 143-176 13-43 (101)
20 4ac7_B Urease subunit beta; hy 71.9 2.8 9.7E-05 32.2 3.1 30 143-175 19-48 (126)
21 4ubp_B Protein (urease (chain 71.9 2.8 9.7E-05 32.2 3.1 30 143-175 19-48 (126)
22 3isy_A Bsupi, intracellular pr 71.4 9.5 0.00033 29.0 6.0 48 137-191 7-54 (120)
23 1yew_A Particulate methane mon 52.9 14 0.00047 33.5 4.4 29 139-168 255-283 (382)
24 3rfr_A PMOB; membrane, oxidore 50.6 13 0.00045 34.0 4.0 29 139-168 289-317 (419)
25 3qga_A UREA2, fusion of urease 49.8 8.2 0.00028 32.4 2.3 31 142-175 117-147 (225)
26 1e9y_A Urease subunit alpha; h 46.4 8.7 0.0003 32.5 1.9 41 132-175 106-147 (238)
27 2yfo_A Alpha-galactosidase-suc 43.0 74 0.0025 31.2 8.4 56 116-178 130-186 (720)
28 4fnq_A Alpha-galactosidase AGA 42.6 73 0.0025 31.3 8.2 58 115-179 129-187 (729)
29 4gy7_A Urease; JACK bean, hydr 36.4 29 0.00099 34.8 4.3 31 142-175 143-173 (840)
30 2xn2_A Alpha-galactosidase; hy 33.8 88 0.003 30.7 7.3 56 116-178 134-190 (732)
31 2ys4_A Hydrocephalus-inducing 33.0 41 0.0014 24.7 3.8 35 143-178 36-70 (122)
32 3mi6_A Alpha-galactosidase; NE 32.4 1.1E+02 0.0037 30.3 7.6 49 115-170 130-179 (745)
33 2x3c_A Toxic extracellular end 31.1 45 0.0015 29.7 4.3 19 149-167 36-54 (343)
34 2wnx_A Glycoside hydrolase, fa 28.8 90 0.0031 24.8 5.3 34 148-181 26-60 (170)
35 2xbt_A Cellulosomal scaffoldin 26.9 75 0.0026 25.1 4.4 35 149-183 24-59 (160)
36 2jny_A Uncharacterized BCR; st 24.7 15 0.00052 24.9 -0.0 15 69-83 38-52 (67)
37 3cfu_A Uncharacterized lipopro 24.7 54 0.0019 25.7 3.2 25 150-177 48-72 (159)
38 2e6j_A Hydin protein; PAPD, st 23.8 1.2E+02 0.004 21.4 4.8 22 149-170 26-47 (112)
39 2hf1_A Tetraacyldisaccharide-1 23.0 17 0.00059 24.7 -0.0 15 69-83 36-50 (68)
40 1k1x_A 4-alpha-glucanotransfer 22.9 1.9E+02 0.0064 28.1 7.3 48 118-168 526-573 (659)
41 2jr6_A UPF0434 protein NMA0874 22.8 17 0.0006 24.7 -0.1 15 69-83 36-50 (68)
42 2kpi_A Uncharacterized protein 21.8 19 0.00064 23.5 -0.1 16 69-84 38-53 (56)
43 2js4_A UPF0434 protein BB2007; 21.7 19 0.00065 24.6 -0.0 15 69-83 36-50 (70)
44 1jz7_A Lactase, beta-galactosi 20.5 6.9E+02 0.023 25.4 12.2 153 25-197 746-910 (1023)
45 2pk7_A Uncharacterized protein 20.5 21 0.00071 24.4 -0.0 15 69-83 36-50 (69)
No 1
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=100.00 E-value=2e-39 Score=288.59 Aligned_cols=194 Identities=27% Similarity=0.422 Sum_probs=160.4
Q ss_pred cceEEEEecCCCeeEEEEECCCceEEEEecCCcEEEEEEeC-CCeEEEecCCccccCCCCcccCCcceeccccCCCCCCC
Q 025274 11 RAAVEVTKDRNGIEQVVLRNPRGASAKISLHGGQALSWRTE-RGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRGSLE 89 (255)
Q Consensus 11 ~~~~~~~~~~~gl~~v~L~~~~~~~a~V~~~GA~v~s~~~~-~g~e~L~~~~~a~~~~~~~irgGiPv~fP~fg~~~~~~ 89 (255)
.+.+++.. ++|++.++|+++. .+|+|+++||+|+||++. +|.|+||+++.+.|+.+++||||+|+||||||+.. ++
T Consensus 10 ~~~~~~~~-~~~~~~~~l~~~~-~~a~i~~~Ga~l~s~~~~~~g~e~Lw~~~~~~~~~~~~irGGiPvlfP~~gr~~-~~ 86 (270)
T 1jov_A 10 TPELHLVQ-HNDIPVLHLKHAV-GTAKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVK-QP 86 (270)
T ss_dssp ETTEEEEE-ETTEEEEEEEETT-EEEEEETBTTEEEEEEETTCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGGGS-SS
T ss_pred CCceEEee-eCCceEEEEeCCC-cEEEEECCCCEEEEEEECCCCceEEEECcHHhcCCCCCccCccEEEEeccCCCC-CC
Confidence 45566654 8999999999986 799999999999999985 57899999999999999999999999999999854 69
Q ss_pred CceeecccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEeCCCcEEEEEEEEeCCCCeEEEee
Q 025274 90 QHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNINCKPFSFSI 169 (255)
Q Consensus 90 ~HGfaR~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~~~L~i~~~V~N~g~~~~pf~~ 169 (255)
+|||||+++|+|++.+ ++++...++|.|.+++ +.|+++++|+|. |+++++|+|+|++ ||++
T Consensus 87 ~HGfaR~~~W~v~~~~------~~~~~v~l~~~l~~~~-------~~f~l~~~~~L~----l~~~~~v~N~g~~--p~~~ 147 (270)
T 1jov_A 87 AHGTARIRLWQLSHYY------ISVHKVRLEFELFSDL-------NIIEAKVSMVFT----DKCHLTFTHYGEE--SAQA 147 (270)
T ss_dssp TTBSGGGSBCEEEEEE------EETTEEEEEEEEECTT-------SCEEEEEEEEES----SSEEEEEEECCSS--CEEE
T ss_pred CCceecCCCcEEeeec------cCCCcEEEEEEECCCc-------cccEEEEEEEEC----CeEEEEEEeCCch--hHhh
Confidence 9999999999999874 1123567788887653 348888999994 6777888999986 6899
Q ss_pred eccccccCCCcceeEEecCCCCccccccccccceeecCCeEEecCCccEEEccCCCeEEE
Q 025274 170 AYHTYFAISDISEVRIEGLETLDYLDNLCQRERFTEQGDALTFESEVTLFSMCIHRNIAQ 229 (255)
Q Consensus 170 g~HpYF~v~d~~~~~v~gl~g~~y~D~~~~~~~~~~~~~~l~f~~~~Drvy~~~~~~~~~ 229 (255)
|+||||+++|+.+++|+|+++ .|+|++.+.... +.+.+.|.+++||||...+..+.+
T Consensus 148 g~HpyF~v~d~~~~~v~g~~~-~~~d~l~~~~~~--~~~~~~~~~~~D~vy~~~~~~~~i 204 (270)
T 1jov_A 148 ALHTYFNIGDINQVEVQGLPE-TCFNSLNQQQEN--VPSPRHISENVDCIYSAENMQNQI 204 (270)
T ss_dssp EECCEEECSCGGGEEEESCCS-EEEETTTTEEEE--CCSSBCCSSCEEEEEECSSSEEEE
T ss_pred hcccceecCCcceEEEECCCC-cceeccCCcccc--cCCcccCCCCccceeCCCCCCEEE
Confidence 999999999999999999955 899987654322 346788999999999876544443
No 2
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=7.5e-38 Score=283.14 Aligned_cols=200 Identities=28% Similarity=0.547 Sum_probs=172.5
Q ss_pred CCcceEEEEecCCCeeEEEEECCCceEEEEecCCcEEEEEEeCCCeEEEecCCccccCCCCcccCCcceeccccCCCC--
Q 025274 9 DHRAAVEVTKDRNGIEQVVLRNPRGASAKISLHGGQALSWRTERGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG-- 86 (255)
Q Consensus 9 ~~~~~~~~~~~~~gl~~v~L~~~~~~~a~V~~~GA~v~s~~~~~g~e~L~~~~~a~~~~~~~irgGiPv~fP~fg~~~-- 86 (255)
...+.+++.. ++|++.++|+|+. .+|+|..+||+|+||+.+++.|+||.++.+.|..++++|||+|+||||+||..
T Consensus 28 ~~~~~~~~~~-~~~~~~~~L~n~~-~~a~I~~~GA~l~s~~~~~g~evL~~~~~~~~~~~~~~~GG~pil~P~~gRi~~g 105 (309)
T 2hta_A 28 QLTPVLSRRQ-LDDLDLIVVDHPQ-VKASFALQGAHLLSWKPVGEEEVLWLSNNTPFKTGVALRGGVPICWPWFGPAAQQ 105 (309)
T ss_dssp ECSSSEEEEE-ETTEEEEEEEETT-EEEEEETBTTEEEEEEETTSCCCBCBCTTCCCCTTCCCSBSBCEEBSCCSSCSST
T ss_pred cCCCceEEee-cCCceEEEEeCCC-eEEEEeccCcEEEEEEeCCCCEEEeCCchHhccCCCCeeccceEEEecCCCCCCC
Confidence 3556778876 8999999999985 99999999999999998766899999998889999999999999999999975
Q ss_pred CCCCceeecccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEeCCCcEEEEEEEEeCCCCeEE
Q 025274 87 SLEQHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNINCKPFS 166 (255)
Q Consensus 87 ~~~~HGfaR~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~~~L~i~~~V~N~g~~~~p 166 (255)
.+++|||||++.|++++.+ ++++...|+|+|.++++++++|||+|+++++|+| + ++|+++++++| +||
T Consensus 106 ~~~~HGfar~~~W~v~~~~------~~~~~~~v~l~l~s~~~~~~gyP~~~~l~vty~L-~-~~L~i~~~~~N----~~~ 173 (309)
T 2hta_A 106 GLPSHGFARNLPWALKAHN------EDDNGVMLTFELQSSEATRKYWPHDFTLLARFKV-G-KTCEIELEAHG----EFA 173 (309)
T ss_dssp TCCTTBSGGGSBCEEEEEE------ECSSCEEEEEEEECCHHHHHHSCCCCEEEEEEEE-S-SSEEEEEEEES----SEE
T ss_pred CCCCccCcCCCceEEEeEe------cCCCceEEEEEeCCChHHhhcCCCceEEEEEEEE-C-CceEEEEEEEC----CeE
Confidence 5789999999999998764 1122467999999887788999999999999999 6 78999999998 899
Q ss_pred EeeeccccccCCCcceeEEecCCCCccccccccccceeecCCeEEecCCccEEEccC
Q 025274 167 FSIAYHTYFAISDISEVRIEGLETLDYLDNLCQRERFTEQGDALTFESEVTLFSMCI 223 (255)
Q Consensus 167 f~~g~HpYF~v~d~~~~~v~gl~g~~y~D~~~~~~~~~~~~~~l~f~~~~Drvy~~~ 223 (255)
|++|+||||+++++.++.+.++ +..|+|++...+....+++++.|.++.|++|++.
T Consensus 174 ~~~g~H~YFnl~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~df~~~~D~~~~~~ 229 (309)
T 2hta_A 174 TTSALHSYFNVGDIANVKVSGL-GDRFIDKVNDAKEGVLTDGIQTFPDRTDRVYLNP 229 (309)
T ss_dssp EEEEECCEEECSCGGGCEEECC-CSEEEETTTTTEEEECSSSCEECSSCEEEEESSC
T ss_pred ehhcCCceEecCCccceEEECC-CCceEeccCCcccccccCCceecCCccCcEEeCC
Confidence 9999999999999889999999 7889987655443334456789999999999853
No 3
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=4.1e-38 Score=282.89 Aligned_cols=193 Identities=32% Similarity=0.562 Sum_probs=166.2
Q ss_pred CCeeEEEEECCCce--EEEEecCCcEEEEEEeCCCeEEEecCCccccCCCCcccCCcceeccccCCCC------CCCCce
Q 025274 21 NGIEQVVLRNPRGA--SAKISLHGGQALSWRTERGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG------SLEQHG 92 (255)
Q Consensus 21 ~gl~~v~L~~~~~~--~a~V~~~GA~v~s~~~~~g~e~L~~~~~a~~~~~~~irgGiPv~fP~fg~~~------~~~~HG 92 (255)
+|++.++|+|+.+. +++|..+||+|+||+.. |.|+||.++.+.|..++++|||+|+|||||||.. ++++||
T Consensus 5 ~~~~~~~L~n~~~~~~~~~i~~~Ga~l~s~~~~-G~~vl~~~~~~~~~~~~~~~GGip~l~P~~gr~~~~~~~y~l~~HG 83 (297)
T 2cir_A 5 ETDKEVVLTHPADETTSVHILKYGATVYSWKLK-SEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHG 83 (297)
T ss_dssp ECSSEEEEEETTEEEEEEEEETBTTEEEEEEET-TEECBCBCTTCCCSSSSCCSBSBCEEBSCSSCCSSSTTGGGSCTTB
T ss_pred cCCCEEEEeCCCCceeEEEEECCCcEEEEEEeC-CeEEEecCcHHHhcCCCCccCCCCEEEEecCCCCCCcccCCCCCcc
Confidence 46789999998766 89999999999999984 7899999998889999999999999999999975 579999
Q ss_pred eecccCeEEEecCCCCCCCCCCCceEEEEEeec---CccccccCCeeEEEEEEEEEeCCCcEEEEEEEEeCC-CCeEEEe
Q 025274 93 FARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKP---SEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNIN-CKPFSFS 168 (255)
Q Consensus 93 faR~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~---~~~~~~~~P~~f~l~~t~~L~~~~~L~i~~~V~N~g-~~~~pf~ 168 (255)
|+|++.|++++.. + ++...|+|.|.+ ++++.++|||+|+++++|+|.+ ++|+++++++|++ +++|||+
T Consensus 84 far~~~W~v~~~~------~-~~~~~v~l~l~s~~~~~~~~~g~P~~~~~~vty~L~~-~~L~i~~~~~N~~~d~~~~~~ 155 (297)
T 2cir_A 84 LARNSTWEFLGQT------K-ENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGS-DYLKTAIEVENTSSSKELKFN 155 (297)
T ss_dssp SGGGSBCEEEEEE------E-ETTEEEEEEECGGGSCHHHHHHSCCCCEEEEEEEECS-SEEEEEEEEECCCSSCCEEEE
T ss_pred ccCCCceEEEeec------c-CCceEEEEEecCCCCCHHHHhhCCCcEEEEEEEEEcC-CEEEEEEEEEcCCCCcceEEe
Confidence 9999999998752 1 113679999998 7888999999999999999987 7899999999999 9999999
Q ss_pred eeccccccCCCcceeEEecCCCCccccccccccceeecCCeEEecCCccEEEccC
Q 025274 169 IAYHTYFAISDISEVRIEGLETLDYLDNLCQRERFTEQGDALTFESEVTLFSMCI 223 (255)
Q Consensus 169 ~g~HpYF~v~d~~~~~v~gl~g~~y~D~~~~~~~~~~~~~~l~f~~~~Drvy~~~ 223 (255)
+|+||||+++++.++.+.|+++..|+|..... ...++.+.+.|.++.|++|...
T Consensus 156 ~~~H~YFnl~~~~~~~~~gv~~~~~~d~~~~~-~~~~~~~~~~~~~~~D~~~~~~ 209 (297)
T 2cir_A 156 WLFHTYFRIEDIEGTMVSNLAGMKLYDQLLKE-SYVDKHPVVTFNQETDVIYQNV 209 (297)
T ss_dssp EEECCEEECSCGGGEEEESCTTCEEEETTTTE-EEECCSSSBCCSSCEEEEECCC
T ss_pred eecCceEeCCCccceEEecCCCCccEeccCCc-cccccCCccccCCccceEEeCC
Confidence 99999999999999999999888888875332 2222345577778899999654
No 4
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=1.3e-37 Score=279.16 Aligned_cols=198 Identities=27% Similarity=0.451 Sum_probs=165.9
Q ss_pred EEEEecCCCeeEEEEECCC-ceEEEEe-cCCcEEEEEEeCCCeEEEecCCccccCCCCcccCCcceeccccCCCC-----
Q 025274 14 VEVTKDRNGIEQVVLRNPR-GASAKIS-LHGGQALSWRTERGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG----- 86 (255)
Q Consensus 14 ~~~~~~~~gl~~v~L~~~~-~~~a~V~-~~GA~v~s~~~~~g~e~L~~~~~a~~~~~~~irgGiPv~fP~fg~~~----- 86 (255)
..+.+..++++.++|+|+. +.++.|. .+||+|+||+. +|.|+||.++.+++++++++|||+|+||||+||..
T Consensus 2 ~~~~~~~~~~~~~~l~n~~~g~~~~v~~~~Ga~l~s~~~-~g~~~l~~~~~~~~~~~~~~~gg~Pvl~P~~gri~~g~~~ 80 (289)
T 3k25_A 2 YNISFTPDRPLTYHLEDDQSLARLSLVPGRGGLVTEWTV-QGQPILYFDRERFQDPSLSVRGGIPILFPICGNLPQDQFN 80 (289)
T ss_dssp EEEEEECCBCCEEEEEETTTTEEEEEEGGGTSEEEEEEE-TTEECBCBCTTGGGSTTSCCCBSBCEEBSCSSCCGGGEEE
T ss_pred cceeeccCCceEEEEECCCCCeEEEeehhcCCEEEEEEe-CCEEEEecChhhccCcccccCCCCCEEECCCCCCCCCEEE
Confidence 4566667899999999975 7888775 89999999998 57899999887778888889999999999999973
Q ss_pred ------CCCCceeecccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEeCCCcEEEEEEEEeC
Q 025274 87 ------SLEQHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNI 160 (255)
Q Consensus 87 ------~~~~HGfaR~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~~~L~i~~~V~N~ 160 (255)
++++|||+|++.|++++.. +++..+|+|+|.++++++++|||+|+++++|+|.+ ++|+++++++|+
T Consensus 81 ~~g~~y~l~~HGf~r~~~W~~~~~~-------~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~-~~L~i~~~~~N~ 152 (289)
T 3k25_A 81 HAGKSYRLKQHGFARDLPWEVIGQQ-------TQDNARLDLRLSHNDATLEAFPFAFELVFSYQLQG-HSLRIEQRIANL 152 (289)
T ss_dssp ETTEEEECCTTBSGGGSCCEEEEEE-------CSSSEEEEEEEECCHHHHTTSCSCEEEEEEEEEET-TEEEEEEEEEEC
T ss_pred ECCEEeecCCCCCcccCCeEEEEec-------CCCCcEEEEEEecChhHHhcCCceEEEEEEEEEeC-CEEEEEEEEEcC
Confidence 4799999999999998763 12367899999988878999999999999999987 789999999999
Q ss_pred CCCeEEEeeeccccccCCCcceeEEecCCCCccccccccccceeecCCeEEec-CCccEEEccC
Q 025274 161 NCKPFSFSIAYHTYFAISDISEVRIEGLETLDYLDNLCQRERFTEQGDALTFE-SEVTLFSMCI 223 (255)
Q Consensus 161 g~~~~pf~~g~HpYF~v~d~~~~~v~gl~g~~y~D~~~~~~~~~~~~~~l~f~-~~~Drvy~~~ 223 (255)
|+++|||++|+||||+++++.+++|+++. ..|+|+..... .. ..+.+.+. +++|++|...
T Consensus 153 ~~~~~~~~~~~H~yF~~~~~~~~~~~~~~-~~~~d~~~~~~-~~-~~~~~~~~~~~~D~~~~~~ 213 (289)
T 3k25_A 153 GDQRMPFSLGFHPYFFCREKLGITLAIPA-NDYLDQKTGDC-HG-YDGQLNLTSPELDLAFTQI 213 (289)
T ss_dssp SSSCEEECCEECCEEECSCCTTCEEECSC-SEEEETTTCCE-EE-CCSCCCTTSSEEEEEECCC
T ss_pred CCCcceeEEecCcEEccCCcceEEEEcCc-ccccccccCcc-cc-cCCcccCCchhhceEeecC
Confidence 99999999999999999999999999985 57888654322 12 22345554 4788988764
No 5
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=99.97 E-value=2.1e-30 Score=232.93 Aligned_cols=136 Identities=24% Similarity=0.481 Sum_probs=123.0
Q ss_pred EEEEECCCceEEEEecCCcEEEEEEeC-CCeEEEecCCccccCCCCcccCCcceeccccCCCC-----------CCCCce
Q 025274 25 QVVLRNPRGASAKISLHGGQALSWRTE-RGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG-----------SLEQHG 92 (255)
Q Consensus 25 ~v~L~~~~~~~a~V~~~GA~v~s~~~~-~g~e~L~~~~~a~~~~~~~irgGiPv~fP~fg~~~-----------~~~~HG 92 (255)
+++|+|+. ++|+|..+||+|+||+.+ +|.|+||.++.++|. ++.|+||||+||.. ++++||
T Consensus 2 ~~~l~n~~-~~~~i~~~Ga~l~s~~~~~~g~e~l~~~~~~~~~------~~~p~l~P~~~Ri~~g~~~~~G~~y~l~~HG 74 (294)
T 3q1n_A 2 MITIENSK-FKAGIAERGAELQSLVNKADNYEYVWTGDKTFWN------RHAPILFPSIGKSNQDQYRLGAKTYPMSQHG 74 (294)
T ss_dssp EEEEECSS-EEEEEETBTTEEEEEEETTTTEECBCCCCTTTCS------CSCCEEBSCCSCCGGGEEEETTEEEECCTTB
T ss_pred EEEEECCC-EEEEEEccCcEEEEEEeCCCCCEEEEcCChhhcc------CCCCEEEeccCCcCCCEEEECCcEEccCCCC
Confidence 57899985 999999999999999974 589999999887776 56899999999973 578999
Q ss_pred eecccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEeCCCcEEEEEEEEeCCCCeEEEeeecc
Q 025274 93 FARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNINCKPFSFSIAYH 172 (255)
Q Consensus 93 faR~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~~~L~i~~~V~N~g~~~~pf~~g~H 172 (255)
|+|++.|++++.+ +.+|+|++.++++++++|||+|+++++|+|.+ ++|+++++++|+++++|||++|+|
T Consensus 75 f~r~~~w~~~~~~----------~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~-~~L~i~~~~~N~~~~~~p~~~~~H 143 (294)
T 3q1n_A 75 FARDYDFDVSDKS----------DSAVTFTQHQNAETLKKFPFEYTLAVTYMLTD-GGLSVHYTVTNDDSKSMPFALGFH 143 (294)
T ss_dssp SGGGSBCEEESCC----------SSEEEEEEECCHHHHHHSCCCEEEEEEEEEET-TEEEEEEEEEECSSSCEEECEEEC
T ss_pred CccCcceEEEEcc----------CCEEEEEEEcCcchhhcCCeEEEEEEEEEEeC-CEEEEEEEEEcCCCCceeeeEecC
Confidence 9999999998764 45799999998877899999999999999987 789999999999999999999999
Q ss_pred ccccCC
Q 025274 173 TYFAIS 178 (255)
Q Consensus 173 pYF~v~ 178 (255)
|||+++
T Consensus 144 ~yFnl~ 149 (294)
T 3q1n_A 144 PAFNVG 149 (294)
T ss_dssp CEEECC
T ss_pred cEEEcC
Confidence 999998
No 6
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=99.97 E-value=2.2e-30 Score=234.33 Aligned_cols=137 Identities=28% Similarity=0.469 Sum_probs=123.4
Q ss_pred EEEEECCCceEEEEecCCcEEEEEEeC-CCeEEEecCCccccCCCCcccCCcceeccccCCCC-----------CCCCce
Q 025274 25 QVVLRNPRGASAKISLHGGQALSWRTE-RGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG-----------SLEQHG 92 (255)
Q Consensus 25 ~v~L~~~~~~~a~V~~~GA~v~s~~~~-~g~e~L~~~~~a~~~~~~~irgGiPv~fP~fg~~~-----------~~~~HG 92 (255)
+++|+|+. ++|+|..+||+|+||+++ ++.|+||.++.++|. +|+|+||||+||.. ++++||
T Consensus 2 ~~~l~n~~-~~~~i~~~GA~l~s~~~~~~~~e~l~~~~~~~~~------~~~pil~P~~nRi~~g~~~~~G~~y~l~~HG 74 (307)
T 3dcd_A 2 DYTIENNM-IKVVISDHGAEIQSVKSAHTDEEFMWQANPEIWG------RHAPVLFPIVGRLKNDEYTYKGKTYHLGQHG 74 (307)
T ss_dssp EEEEECSS-EEEEEETBTTEEEEEEETTTCCBCBCCCCTTTCC------CSSCEEBSCSSCCGGGEEEETTEEEECCTTB
T ss_pred EEEEECCC-EEEEEEccCcEEEEEEECCCCcEEEECCChhhcC------CCCcEEEeecCccCCCeEEECCEEEecCCCC
Confidence 47899985 999999999999999974 578999999888776 57999999999973 478999
Q ss_pred eecccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEeCCCcEEEEEEEEeCCCCeEEEeeecc
Q 025274 93 FARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNINCKPFSFSIAYH 172 (255)
Q Consensus 93 faR~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~~~L~i~~~V~N~g~~~~pf~~g~H 172 (255)
|+|++.|++++.+ +.+|+|++.+++++.++|||+|+++++|+|.+ ++|+++++++|+|+++|||++|+|
T Consensus 75 f~r~~~w~v~~~~----------~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~-~~L~i~~~v~N~g~~~~p~~~g~H 143 (307)
T 3dcd_A 75 FARNADFEVENHT----------KESITFLLKDNEETRKVYPFKFEFRVNYNLMN-NLLEENFSVVNKSDETMIFGVGGH 143 (307)
T ss_dssp SGGGSBCEEEEEE----------TTEEEEEEECCHHHHHHSCCCEEEEEEEEEET-TEEEEEEEEEECSSSCEEECEEEC
T ss_pred CccCcEEEEEEec----------CCEEEEEEecCcchhhhCCCceEEEEEEEEeC-CEEEEEEEEECCCCCcEeEEEEcC
Confidence 9999999998874 35799999988778899999999999999986 789999999999999999999999
Q ss_pred ccccCCC
Q 025274 173 TYFAISD 179 (255)
Q Consensus 173 pYF~v~d 179 (255)
|||+++.
T Consensus 144 pyF~~~~ 150 (307)
T 3dcd_A 144 PGFNLPT 150 (307)
T ss_dssp CEEECCC
T ss_pred cEEEcCC
Confidence 9999983
No 7
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=99.96 E-value=8.8e-30 Score=231.69 Aligned_cols=159 Identities=19% Similarity=0.258 Sum_probs=129.0
Q ss_pred cCCCeeEEEEECCCceEEEEe-cCCcEEEEEEeC-CCeEEEecCCccccCCCCcccCCcceeccccCCCC----------
Q 025274 19 DRNGIEQVVLRNPRGASAKIS-LHGGQALSWRTE-RGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG---------- 86 (255)
Q Consensus 19 ~~~gl~~v~L~~~~~~~a~V~-~~GA~v~s~~~~-~g~e~L~~~~~a~~~~~~~irgGiPv~fP~fg~~~---------- 86 (255)
.++|++.++|+|+. .+|+|. .+||+|+||+.. .+.++||.++.......+++++|+||||| +||+.
T Consensus 10 ~~~g~~~~~L~n~~-~~~~i~p~~GA~l~s~~~~~~g~~~l~~~~~~~~~~~~~~~~G~pv~~p-~nRi~~g~~~~~G~~ 87 (326)
T 3mwx_A 10 TYLGTPAIKAGNEH-LEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFP-PNRISDGTFSFRGRT 87 (326)
T ss_dssp EETTEEEEEEEESS-EEEEEETTTTTEEEEEEETTTTEECBCCCSSHHHHHHCTTSSSCCEEBS-CSEEETTEEEETTEE
T ss_pred EECCeEEEEEECCC-EEEEEchhcCCEEEEEEecCCCceEEccCcChhHhhcCccccCceEcCC-CCcccCCEEEECCEE
Confidence 38999999999986 999999 699999999975 47899999865433334688999999999 68752
Q ss_pred -CCC---------CceeecccCeEEEecCCCCCCCCCCCceEEEEEe--ecCccccccCCeeEEEEEEEEEeCCCcEEEE
Q 025274 87 -SLE---------QHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLL--KPSEEDLKIWPHSFEFRLRVSLAADGNLALI 154 (255)
Q Consensus 87 -~~~---------~HGfaR~~~W~v~~~~~~~~~~~~~~~~~v~l~l--~~~~~~~~~~P~~f~l~~t~~L~~~~~L~i~ 154 (255)
+++ +|||+|++.|++++.. ++++..+|+|++ .+.++++++|||+|+++++|+|.+ ++|+++
T Consensus 88 y~l~~N~~~~~~~lHG~~~~~~W~v~~~~------~~~~~~~v~~~~~~~~~~~~~~g~P~~~~~~v~y~L~~-~~L~i~ 160 (326)
T 3mwx_A 88 YHFDINEKDKHNHLHGFLYHEKWNVVTTK------QTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKE-NTLFKH 160 (326)
T ss_dssp EECCCCBTTTTEEESBSCTTSCCEEEEEE------EESSCEEEEEEEEGGGCHHHHHHSCSCEEEEEEEEEET-TEEEEE
T ss_pred EEccCCCCCCCccccCCccCCceEEEEee------ccCCceEEEEEEEeCCCCccccCCCceEEEEEEEEEcC-CcEEEE
Confidence 234 5999999999998764 111234555555 455556789999999999999997 789999
Q ss_pred EEEEeCCCCeEEEeeeccccccCCCcceeEEec
Q 025274 155 SRIRNINCKPFSFSIAYHTYFAISDISEVRIEG 187 (255)
Q Consensus 155 ~~V~N~g~~~~pf~~g~HpYF~v~d~~~~~v~g 187 (255)
++++|+++++|||++|+||||+++ +.+++|+.
T Consensus 161 ~~~~N~~~~~~~~~~~~H~yFnl~-~~~~~l~~ 192 (326)
T 3mwx_A 161 ATVMNKGKEAFPWGIGYHTTFIFP-AESSLFSL 192 (326)
T ss_dssp EEEEECSSSCEEECCEECCCEECC-TTTEEEEE
T ss_pred EEEEECCCCceeeEEeeccccCCC-CCCEEEEE
Confidence 999999999999999999999998 66666544
No 8
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=99.96 E-value=9.2e-29 Score=222.06 Aligned_cols=148 Identities=16% Similarity=0.197 Sum_probs=126.3
Q ss_pred CeeEEEEECCCceEEEEecC-CcEEEEEEeCCCeEEEecCCccccCCCCcccCCcceeccccCCCC--------------
Q 025274 22 GIEQVVLRNPRGASAKISLH-GGQALSWRTERGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG-------------- 86 (255)
Q Consensus 22 gl~~v~L~~~~~~~a~V~~~-GA~v~s~~~~~g~e~L~~~~~a~~~~~~~irgGiPv~fP~fg~~~-------------- 86 (255)
|++.++|+|+. .+|+|..+ ||+|+|| . +|.|+||.++++ .+++++|.|+||||+||+.
T Consensus 1 g~~~~~l~n~~-~~~~i~~~~Ga~l~s~-~-~g~~vl~~~~~~----~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~ 73 (291)
T 3nre_A 1 GMTIYTLSHGS-LKLDVSDQGGVIEGFW-R-DTTPLLRPGKKS----GVATDASCFPLVPFANRVSGNRFVWQGREYQLQ 73 (291)
T ss_dssp CCCEEEEEETT-EEEEEETBTTEEEEEE-E-TTEESSCCCCCS----SCGGGSSEEEEBSCCSBCGGGEEEETTEEEECC
T ss_pred CccEEEEcCCC-EEEEEEcccCceEEEE-e-CCCEEEECCCcc----cCccccCCcEEEeeCCEecCCEEEECCEEEECC
Confidence 67899999985 99999996 9999999 4 689999988732 4688999999999999862
Q ss_pred ------CCCCceeecccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEeCCCcEEEEEEEEeC
Q 025274 87 ------SLEQHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNI 160 (255)
Q Consensus 87 ------~~~~HGfaR~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~~~L~i~~~V~N~ 160 (255)
.+++|||+|++.|++++.+ +.+|+|+|.++ + ||++|+++++|+|.+ ++|+++++++|+
T Consensus 74 ~N~~~~~~~~HG~~~~~~W~~~~~~----------~~~v~l~l~~~----~-~P~~~~~~v~y~L~~-~~L~i~~~~~N~ 137 (291)
T 3nre_A 74 PNVEWDAHYLHGDGWLGEWQCVSHS----------DDSLCLVYEHR----S-GVYHYRVSQAFHLTA-DTLTVTLSVTNQ 137 (291)
T ss_dssp CCSTTCSSCBSBSGGGSBCEEEEEC----------SSEEEEEEEEE----S-SSCEEEEEEEEEECS-SEEEEEEEEEEC
T ss_pred CCCCCCCCCCCCchhcceeEEEEcc----------CCEEEEEEeCC----C-CCceEEEEEEEEEeC-CeEEEEEEEEEC
Confidence 3468999999999998864 34688888752 6 999999999999987 789999999999
Q ss_pred CCCeEEEeeeccccccCCCcceeEEecCCCCcccc
Q 025274 161 NCKPFSFSIAYHTYFAISDISEVRIEGLETLDYLD 195 (255)
Q Consensus 161 g~~~~pf~~g~HpYF~v~d~~~~~v~gl~g~~y~D 195 (255)
++++|||++|+||||++++...++|.+ ..|++
T Consensus 138 ~~~~~~~~~~~H~YFnl~~~~~l~i~a---~~~~~ 169 (291)
T 3nre_A 138 GAETLPFGTGWHPYFPLSPQTRIQAQA---SGYWL 169 (291)
T ss_dssp SSSCEEECCEEEEEEECCTTCEEEECC---SEEEE
T ss_pred CCCCccceEEcCccEecCCCeEEEEEC---CEEEE
Confidence 999999999999999999877777653 45543
No 9
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=99.96 E-value=2.1e-28 Score=224.10 Aligned_cols=159 Identities=23% Similarity=0.397 Sum_probs=129.7
Q ss_pred cCCCeeEEEEECCCceEEEEe-cCCcEEEEEEeC-CCeEEEecCCc----cccCCCCcccCCcceeccccCCCC------
Q 025274 19 DRNGIEQVVLRNPRGASAKIS-LHGGQALSWRTE-RGEELLFTSTK----AIFKPPHAVRGGIPICFPQFGNRG------ 86 (255)
Q Consensus 19 ~~~gl~~v~L~~~~~~~a~V~-~~GA~v~s~~~~-~g~e~L~~~~~----a~~~~~~~irgGiPv~fP~fg~~~------ 86 (255)
.++|++.++|+|+. ++|+|. .+||+|+||+.. .+.++||.++. +.|. .+++++|+||||| +||+.
T Consensus 14 ~~~g~~~~~L~n~~-~~~~i~p~~Ga~l~s~~~~~~g~~~l~~~~~~~~~~~y~-~~~~~~G~pv~~p-~nRi~~g~f~~ 90 (341)
T 3os7_A 14 IWSEHKCIRFAAGG-YEALIIPDVGGNVVELKDTNKGVTILRTPKKDLKFEDFK-NRPQVYGLPVLFP-PNRIDDGTFKL 90 (341)
T ss_dssp ETTTEEEEEEEETT-EEEEEETTTTTEEEEEEETTTTEECBCCCCTTCCHHHHH-HSGGGSSCCEESS-CSEEETTEEEE
T ss_pred EECCEEEEEEeCCC-EEEEEchhcCCEEEEEEeCCCCCeEEEcCCcccchhhhh-hCCcccceeEeCC-CCcccCCEEEE
Confidence 48999999999985 999997 899999999975 37999998876 3443 4688999999999 57641
Q ss_pred -----CCC---------CceeecccCeEEEecCCCCCCCCCCCceEE--EEEeecCccccccCCeeEEEEEEEEEeCCCc
Q 025274 87 -----SLE---------QHGFARNRSWVIDDNPPPLKPSDSQGKVYV--DLLLKPSEEDLKIWPHSFEFRLRVSLAADGN 150 (255)
Q Consensus 87 -----~~~---------~HGfaR~~~W~v~~~~~~~~~~~~~~~~~v--~l~l~~~~~~~~~~P~~f~l~~t~~L~~~~~ 150 (255)
+++ +|||+|++.|++++.. ++++..+| ++.+.+.++++++|||+|+++++|+|.+ ++
T Consensus 91 ~G~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~------~~~~~~~v~~~~~~~d~~~~~~g~P~~~~~~v~y~L~~-~~ 163 (341)
T 3os7_A 91 GDKTYKFPINEAKNNNYIHGFIKNSKWTVHKKK------IDQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELSS-KG 163 (341)
T ss_dssp TTEEEECCCSBTTTTEEESCSGGGSCCEEEEEE------EETTEEEEEEEEEECTTSTTTTTSCCCEEEEEEEEEET-TE
T ss_pred CCEEEEccCCCCCCCcCccCCcccCcEEEEEee------cCCCccEEEEEEEeCCCcchhhcCCceEEEEEEEEEeC-Ce
Confidence 223 6999999999998764 11224445 5555566667889999999999999997 68
Q ss_pred EEEEEEEEeCCCCeEEEeeeccccccCC-----CcceeEEec
Q 025274 151 LALISRIRNINCKPFSFSIAYHTYFAIS-----DISEVRIEG 187 (255)
Q Consensus 151 L~i~~~V~N~g~~~~pf~~g~HpYF~v~-----d~~~~~v~g 187 (255)
|+++++++|+++++|||++|+||||+++ ++.+..|+.
T Consensus 164 L~i~~~~~N~~~~~~p~~~~~H~yF~l~~~~~~~~~~~~l~~ 205 (341)
T 3os7_A 164 LKQTTSVVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKI 205 (341)
T ss_dssp EEEEEEEEECSSSCEEECCEECCEEESSCBTTCCGGGEEEEE
T ss_pred EEEEEEEEeCCCCcEEEEEecCceeecCCCCCCCcccEEEEE
Confidence 9999999999999999999999999998 466666653
No 10
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.3e-27 Score=215.95 Aligned_cols=169 Identities=13% Similarity=0.209 Sum_probs=132.4
Q ss_pred ecCCCeeEEEEECCCceEEEEecCCcEEEEEEeCCCeEEEe-cCCccccCCCCcccCCcceeccccCCCC----------
Q 025274 18 KDRNGIEQVVLRNPRGASAKISLHGGQALSWRTERGEELLF-TSTKAIFKPPHAVRGGIPICFPQFGNRG---------- 86 (255)
Q Consensus 18 ~~~~gl~~v~L~~~~~~~a~V~~~GA~v~s~~~~~g~e~L~-~~~~a~~~~~~~irgGiPv~fP~fg~~~---------- 86 (255)
.+..++..++|+|+.+++|+|..+||+|+||+.. |.++|| .++.+.|....+++|+ +++||+||+.
T Consensus 5 ~~~~~~~~~~l~n~~~~~~~i~~~GA~l~s~~~~-g~~vl~~~~~~~~y~~~~~~~G~--~l~p~~nRi~~g~f~~~G~~ 81 (342)
T 1yga_A 5 NGDNKYGVITIGDEKKFQATIAPLGATLVDLKVN-GQSVVQGYSNVQDYLTDGNMMGA--TVGRYANRIAKGVFSLDDGP 81 (342)
T ss_dssp --CCTTCCEEEEETTTEEEEEETBTTEEEEEEET-TEECBCCCSSGGGGTTCSSCTTC--EECSBCSEEGGGEEEETTEE
T ss_pred CCCceEEEEEEECCCCEEEEEECCCCEEEEEEEC-CeeEEecCCChHHhccCCCeEcc--EECCCCCceeCCEEEECCEE
Confidence 3456788999999756999999999999999985 689887 6666777766677655 5569999862
Q ss_pred -CCC-------Cceee---cccCeEEEecCCCCCCCCCCCceEEEEEeecC--ccccccCCeeEEEEEEEEEeC-CCcEE
Q 025274 87 -SLE-------QHGFA---RNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPS--EEDLKIWPHSFEFRLRVSLAA-DGNLA 152 (255)
Q Consensus 87 -~~~-------~HGfa---R~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~--~~~~~~~P~~f~l~~t~~L~~-~~~L~ 152 (255)
+++ +|||+ |++.|++++... ++++...|+|+|.+. +++++.|||+|+++++|+|.+ +++|+
T Consensus 82 y~l~~n~~~~~lHG~~~g~~~~~W~v~~~~~-----~~~~~~~v~l~l~~~~~~~g~~~yP~~~~~~vty~L~~~~~~L~ 156 (342)
T 1yga_A 82 HKLTVNNCGNTNHSSISSLNLKQYKASPVEN-----PSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLD 156 (342)
T ss_dssp EECCCCBTTBEETTGGGCGGGSBCEECCCEE-----EETTEEEEEEEEEECSSSSSCCCSSSEEEEEEEEEEETTTTEEE
T ss_pred EEcCCCCCCcccCCCccccCcceeeeEEeec-----cCCCCCEEEEEEECCcccCCCcCCCeEEEEEEEEEEeCCCCEEE
Confidence 233 59999 699999976410 000255788888864 445666999999999999983 36899
Q ss_pred EEEEEEeCCCCeEEEeeeccccccCC------CcceeEEecCCCCcccc
Q 025274 153 LISRIRNINCKPFSFSIAYHTYFAIS------DISEVRIEGLETLDYLD 195 (255)
Q Consensus 153 i~~~V~N~g~~~~pf~~g~HpYF~v~------d~~~~~v~gl~g~~y~D 195 (255)
++++++|+++++|||++|+||||+++ ++.++.|+ +++..|++
T Consensus 157 i~~~~~N~~d~~~p~~~~~H~YFnl~~~~~~~~i~~~~l~-l~a~~~~~ 204 (342)
T 1yga_A 157 MEYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVK-VCSNKSLE 204 (342)
T ss_dssp EEEEEEEEESSEEECBCEECCCBCTTTTTCTTCCTTEEEE-ESCCEEEE
T ss_pred EEEEEEeCCCCceEEeeeccceEEcCCCCCCCcccceEEE-EeCCeEEE
Confidence 99999999999999999999999998 46778887 66777774
No 11
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=99.92 E-value=6.6e-25 Score=201.02 Aligned_cols=155 Identities=15% Similarity=0.234 Sum_probs=122.9
Q ss_pred CeeEEEEECCCceEEEEecCCcEEEEEEeC--CC--eEEEe-cCCccccCCCCcccCCcceeccccCCCC----------
Q 025274 22 GIEQVVLRNPRGASAKISLHGGQALSWRTE--RG--EELLF-TSTKAIFKPPHAVRGGIPICFPQFGNRG---------- 86 (255)
Q Consensus 22 gl~~v~L~~~~~~~a~V~~~GA~v~s~~~~--~g--~e~L~-~~~~a~~~~~~~irgGiPv~fP~fg~~~---------- 86 (255)
++..++|+|+ +++|+|..+||+|+||+.+ +| .++|| .++.+.|....+++| ++||||+||+.
T Consensus 20 ~~~~~~L~n~-~~~~~i~~~GA~l~s~~~~~~~G~~~~vv~g~~~~~~y~~~~~~~G--~~l~p~~nRi~~g~f~~~G~~ 96 (344)
T 1snz_A 20 TVEKFQLQSD-LLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFG--AVIGRVANRIAKGTFKVDGKE 96 (344)
T ss_dssp EEEEEEEECS-SCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHSSCSCTT--CEECSBCSEEGGGEEEETTEE
T ss_pred EEEEEEEEcC-CEEEEEecCCcEEEEEEecCCCCCEeeEEECCCChHHHhhCCCcee--eEecCcCCcccCCEEEECCEE
Confidence 3789999998 6999999999999999863 34 38888 555566655556664 37999999863
Q ss_pred -CC-------CCceeec---ccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEeCCCcEEEEE
Q 025274 87 -SL-------EQHGFAR---NRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALIS 155 (255)
Q Consensus 87 -~~-------~~HGfaR---~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~~~L~i~~ 155 (255)
++ ++|||+| ++.|++++.+ .+|+|++.+.+ +.++||++|+++++|+|.+ ++|++++
T Consensus 97 y~L~~N~~~~~lHG~~~g~~~~~W~v~~~~-----------~~v~l~l~~~~-~~~gyP~~~~~~vty~L~~-~~L~i~~ 163 (344)
T 1snz_A 97 YHLAINKEPNSLHGGVRGFDKVLWTPRVLS-----------NGVQFSRISPD-GEEGYPGELKVWVTYTLDG-GELIVNY 163 (344)
T ss_dssp EECCCTBTTBEETTSSSCGGGSBCEEEEET-----------TEEEEEEEECT-TGGGCCSCEEEEEEEEEET-TEEEEEE
T ss_pred EECCCCCCCcccCCCccccccceeeEEEeC-----------CEEEEEEECCC-cCCCCCEEEEEEEEEEEcC-CEEEEEE
Confidence 23 3899995 8999998761 25888888765 5789999999999999987 4899999
Q ss_pred EEEeCCCCeEEEeeeccccccCCC-----cceeEEecCCCCcccc
Q 025274 156 RIRNINCKPFSFSIAYHTYFAISD-----ISEVRIEGLETLDYLD 195 (255)
Q Consensus 156 ~V~N~g~~~~pf~~g~HpYF~v~d-----~~~~~v~gl~g~~y~D 195 (255)
+++| +++|||++|+||||++++ +.+..|+ ++...|++
T Consensus 164 ~a~~--d~~~p~~~~~H~YFnl~~~~~~~i~~~~L~-i~a~~~~~ 205 (344)
T 1snz_A 164 RAQA--SQATPVNLTNHSYFNLAGQASPNINDHEVT-IEADTYLP 205 (344)
T ss_dssp EEEE--SSCEECBCEECCCBCTTCTTCSCCTTCEEE-ECEEEECC
T ss_pred EEEe--CCceEEeccccceEecCCCCCCcccCEEEE-EECCeEEE
Confidence 9998 899999999999999984 5666665 34445543
No 12
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=99.89 E-value=4.3e-23 Score=189.35 Aligned_cols=145 Identities=19% Similarity=0.308 Sum_probs=118.4
Q ss_pred CeeEEEEECCCceEEEEecCCcEEEEEEeCCCeEEEecCC-ccccCCCCcccCCcceeccccCCCC-----------CCC
Q 025274 22 GIEQVVLRNPRGASAKISLHGGQALSWRTERGEELLFTST-KAIFKPPHAVRGGIPICFPQFGNRG-----------SLE 89 (255)
Q Consensus 22 gl~~v~L~~~~~~~a~V~~~GA~v~s~~~~~g~e~L~~~~-~a~~~~~~~irgGiPv~fP~fg~~~-----------~~~ 89 (255)
.+..++|+|..+++++|..+||.|+||+. +|.+++|..+ .+.|....+.+| |+++||.||+. +++
T Consensus 11 ~~~~~tL~n~~~~~v~i~~~GA~l~sl~~-~G~~vvlg~~~~~~y~~~~~~~G--~~lgp~anRI~~g~f~~~G~~y~L~ 87 (347)
T 1nsx_A 11 GSDLISLTNKAGVTISFTNLGARIVDWQK-DGKHLILGFDSAKEYLEKDAYPG--ATVGPTAGRIKDGLVKISGKDYILN 87 (347)
T ss_dssp TEEEEEEECTTSCEEEEETBTTEEEEEEE-TTEESBCCCSSHHHHHHTCSCTT--CEECSBCSEEGGGEEEETTEEEECC
T ss_pred eeEEEEEECCCceEEEEEccCcEEEEEEE-CCeEEEEeCCCHHHHhhCCCeEe--eEEcccCCcccCCEEEECCEEEEcc
Confidence 67889999975699999999999999994 6888888644 356644445554 79999999863 344
Q ss_pred -------Cceee---cccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEeCCCcEEEEEEEEe
Q 025274 90 -------QHGFA---RNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRN 159 (255)
Q Consensus 90 -------~HGfa---R~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~~~L~i~~~V~N 159 (255)
+||++ |.+.|++++.+ + +...+|+|++.+. ++.++||++|+++++|+|.++++|+++++++
T Consensus 88 ~N~~~n~lHGg~~g~~~~~W~v~~~~------~-~~~~~v~l~l~s~-d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~- 158 (347)
T 1nsx_A 88 QNEGPQTLHGGEESIHTKLWTYEVTD------L-GAEVQVKFSLVSN-DGTNGYPGKIEMSVTHSFDDDNKWKIHYEAI- 158 (347)
T ss_dssp CCBTTBEETTSTTCGGGSBCEEEEEE------C-SSEEEEEEEEEEC-TTGGGCCSCEEEEEEEEEETTSEEEEEEEEE-
T ss_pred CCCCCcccCCCCcccccceEEEEEcc------C-CcceEEEEEEECC-CccCCCCeEEEEEEEEEECCCCeEEEEEEEE-
Confidence 89999 99999998763 1 1123799999986 4678999999999999998557899999987
Q ss_pred CCCCeEEEeeeccccccCCC
Q 025274 160 INCKPFSFSIAYHTYFAISD 179 (255)
Q Consensus 160 ~g~~~~pf~~g~HpYF~v~d 179 (255)
++++|||++|+||||+++.
T Consensus 159 -~d~~tp~nlg~HpYFnl~g 177 (347)
T 1nsx_A 159 -SDKDTVFNPTGNVYFNLNG 177 (347)
T ss_dssp -ESSCEECBCEECCEECTTS
T ss_pred -cCCCeEEeeeccceEecCC
Confidence 7999999999999999984
No 13
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=99.88 E-value=6.4e-23 Score=187.58 Aligned_cols=151 Identities=14% Similarity=0.180 Sum_probs=117.0
Q ss_pred CCCeeEEEEECCCceEEEEecCCcEEEEEEe--CCC--eEEEecCCc-cccCCCCcccCCcceeccccCCCC--------
Q 025274 20 RNGIEQVVLRNPRGASAKISLHGGQALSWRT--ERG--EELLFTSTK-AIFKPPHAVRGGIPICFPQFGNRG-------- 86 (255)
Q Consensus 20 ~~gl~~v~L~~~~~~~a~V~~~GA~v~s~~~--~~g--~e~L~~~~~-a~~~~~~~irgGiPv~fP~fg~~~-------- 86 (255)
+..+..++|+ +.+.+|+|..+||.|+||+. ++| .++||..+. +.|....+++| ++++||.||+.
T Consensus 10 ~~~~~~~~L~-~~~~~~~i~~~GA~l~sl~~~d~~G~~~dvvl~~~~~~~y~~~~~~~G--~~lgp~anRI~~g~f~~~G 86 (339)
T 1lur_A 10 MASGFIEIAN-KQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIG--KTVGRVANRIKNSTLHFDG 86 (339)
T ss_dssp -CCCCEEEEC-SSSCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHHCSSCTT--CEECSBCSEEGGGEEEETT
T ss_pred cceeEEEEEe-CCCEEEEEecCCcEEEEEEEECCCCCEeEEEEcCCChHHhccCCCccc--cEecCcCCeecCCEEEECC
Confidence 4567889994 44699999999999999986 245 799987643 43333445554 46789988762
Q ss_pred ---CCC-------Cceee---cccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEeCCCcEEE
Q 025274 87 ---SLE-------QHGFA---RNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLAL 153 (255)
Q Consensus 87 ---~~~-------~HGfa---R~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~~~L~i 153 (255)
+++ +|||+ +.+.|++++.+ +.+|+|++.+.+ +.++||++|+++++|+|.++++|++
T Consensus 87 ~~y~L~~N~~~n~lHGg~~g~~~~~W~v~~~~----------~~~v~l~l~s~d-~~~gyPg~~~~~vtY~L~~~~~L~i 155 (339)
T 1lur_A 87 KQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHA----------PESVSFSVRANE-QDDGLPGDAKIDVTYTVNDRNQLII 155 (339)
T ss_dssp EEEECCCSBTTBEETTCTTSGGGSBCEEEEEE----------TTEEEEEEEEEH-HHHSSSSEEEEEEEEEECTTSEEEE
T ss_pred EEEECCCCCCCcccCCCCcccccceeeEEEcc----------CCEEEEEEECCC-cCCCCCeEEEEEEEEEECCCCeEEE
Confidence 233 89999 58999998763 346888888765 5789999999999999985478999
Q ss_pred EEEEEeCCCCeEEEeeeccccccCCC---cceeEEe
Q 025274 154 ISRIRNINCKPFSFSIAYHTYFAISD---ISEVRIE 186 (255)
Q Consensus 154 ~~~V~N~g~~~~pf~~g~HpYF~v~d---~~~~~v~ 186 (255)
++++ +++++|||++|+||||++++ +.+..|+
T Consensus 156 ~~~a--~~d~~tp~~lg~HpYFnl~~~~~i~~~~L~ 189 (339)
T 1lur_A 156 EHHA--TCDTPGLLALTNHAYWNLDGSDTVAEHFLE 189 (339)
T ss_dssp EEEE--ECSSCEECBCEECCEECSSCCSCSTTCEEE
T ss_pred EEEE--eCCCCeEEeeeccceEECCCCCcccCEEEE
Confidence 9998 68999999999999999985 5655553
No 14
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=99.87 E-value=1.6e-21 Score=178.41 Aligned_cols=149 Identities=19% Similarity=0.251 Sum_probs=117.6
Q ss_pred eeEEEEECCCceEEEEecCCcEEEEEEeCCCeEEEecCC-ccccCCCCcccCCcceeccccCCCC-----------CCCC
Q 025274 23 IEQVVLRNPRGASAKISLHGGQALSWRTERGEELLFTST-KAIFKPPHAVRGGIPICFPQFGNRG-----------SLEQ 90 (255)
Q Consensus 23 l~~v~L~~~~~~~a~V~~~GA~v~s~~~~~g~e~L~~~~-~a~~~~~~~irgGiPv~fP~fg~~~-----------~~~~ 90 (255)
+..++|+|+.+++|+|..+||.|+||+.+ +.+++|..+ .+.|....+. .| ++++||.||+. ++++
T Consensus 18 v~~~tL~n~~g~~v~i~~~GA~l~sl~~~-~~dvvlg~~~~~~y~~~~~~-~G-~~lgp~anRI~~g~f~~~G~~y~L~~ 94 (338)
T 3imh_A 18 LCEITLENDAGMAVKVLNYGATLEKVLLD-GENMILSLNSPEDYSKERNF-LG-GTVGRIAGRVRAGQWKHGNEIHQLPL 94 (338)
T ss_dssp EEEEEEECSSSEEEEEETBTTEEEEEEET-TEECBCCCSSGGGGGTSCCC-TT-CEECSBCSEEGGGEEEETTEEEECCC
T ss_pred EEEEEEECCCcEEEEEecCCcEEEEEEEC-CEEEEecCCChHHhccCCCe-Ee-eEEEeeCCEecCCEEEECCEEEECCC
Confidence 66799999867999999999999999975 589998654 3445433343 34 58999999863 3444
Q ss_pred -------ceee--cccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEeCCCcEEEEEEEEeCC
Q 025274 91 -------HGFA--RNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNIN 161 (255)
Q Consensus 91 -------HGfa--R~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~~~L~i~~~V~N~g 161 (255)
||++ +.+.|+++... ..+..+|+|++.+.+ ..++||++|+++++|+|.++++|+++++++ +
T Consensus 95 N~g~n~LHGg~g~~~~~W~v~~~~-------~~~~~~v~l~l~s~d-~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~--~ 164 (338)
T 3imh_A 95 NDGDNHIHGGIGTDMHVWDFRPSC-------DSEHARVDLTLFDPD-GNNDYPGNLKLHARYELDNENNLHYLLEAV--S 164 (338)
T ss_dssp CBTTBEETTSSCGGGSBCEEEEEE-------CSSEEEEEEEEEECT-TGGGCCSCEEEEEEEEEETTSEEEEEEEEE--E
T ss_pred CCCCcCCCCCCCcCCceEEEEeee-------ecCCCEEEEEEECCc-cccCCCeEEEEEEEEEEecCCeEEEEEEEe--c
Confidence 9998 88999995421 112678999998753 578999999999999999756899999987 7
Q ss_pred CCeEEEeeeccccccCC-CcceeE
Q 025274 162 CKPFSFSIAYHTYFAIS-DISEVR 184 (255)
Q Consensus 162 ~~~~pf~~g~HpYF~v~-d~~~~~ 184 (255)
+++|||++++||||+++ ++.+..
T Consensus 165 d~~tp~nlg~HpYFnL~g~i~~~~ 188 (338)
T 3imh_A 165 DKLTIFNPVNHTYFNLGERAEDLN 188 (338)
T ss_dssp SSSEECBCEECCEECTTSCGGGCE
T ss_pred CCCeEEEEeeCCEEeCCCCcCCeE
Confidence 99999999999999998 454433
No 15
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=99.85 E-value=2.8e-21 Score=190.83 Aligned_cols=156 Identities=13% Similarity=0.183 Sum_probs=120.8
Q ss_pred CCeeEEEEECCCceEEEEecCCcEEEEEEeCCCeEEEecCC--ccccCCCCcccCCcceeccccCCCC-----------C
Q 025274 21 NGIEQVVLRNPRGASAKISLHGGQALSWRTERGEELLFTST--KAIFKPPHAVRGGIPICFPQFGNRG-----------S 87 (255)
Q Consensus 21 ~gl~~v~L~~~~~~~a~V~~~GA~v~s~~~~~g~e~L~~~~--~a~~~~~~~irgGiPv~fP~fg~~~-----------~ 87 (255)
.....++|+|+++.+++|..+||.|+||+. .|.+++|..+ +.+|....+. .| ++++||.||+. +
T Consensus 371 ~~~~~~~l~n~~~~~~~i~~~Ga~l~s~~~-~g~~~v~~~~~~~~y~~~~~~~-~g-~~l~~~~nRi~~g~f~~~G~~y~ 447 (699)
T 1z45_A 371 YDARFVTIGAGTRFQATFANLGASIVDLKV-NGQSVVLGYENEEGYLNPDSAY-IG-ATIGRYANRISKGKFSLCNKDYQ 447 (699)
T ss_dssp TTSEEEEESTTSSEEEEEESBTTCEEEEEE-TTEECBCCCSSHHHHTCTTCCC-TT-CEECSBCSEEGGGEEEETTEEEE
T ss_pred cceEEEEEECCCceEEEEEccCeEEEEEee-cCceEEECCCCHHHHhhcCCCc-cc-cccCcccCeecCcEEEECCEEEE
Confidence 356789999985699999999999999998 4789998644 3445433443 34 67899999863 3
Q ss_pred CC-------Cceeec---ccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEe-CCCcEEEEEE
Q 025274 88 LE-------QHGFAR---NRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLA-ADGNLALISR 156 (255)
Q Consensus 88 ~~-------~HGfaR---~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~-~~~~L~i~~~ 156 (255)
++ +|||+| .+.|+++.... ++++..+++|.+.++++ .++|||+|+++++|+|. ++++|+++++
T Consensus 448 l~~n~~~~~lHG~~~g~~~~~w~~~~~~~-----~~~~~~~~~~~~~~~~~-~~gyP~~~~~~v~y~L~~~~~~L~i~~~ 521 (699)
T 1z45_A 448 LTVNNGVNANHSSIGSFHRKRFLGPIIQN-----PSKDVFTAEYMLIDNEK-DTEFPGDLLVTIQYTVNVAQKSLEIVYK 521 (699)
T ss_dssp CCCCBTTBEETTGGGCGGGSBCEEEEEEE-----EETTEEEEEEEEEECGG-GSSSSSEEEEEEEEEEETTTTEEEEEEE
T ss_pred ccCCCCCcccCCCccccceeecceeeecc-----CCCCcceEEEEEECCCc-CCCCCceEEEEEEEEEecCCCEEEEEEE
Confidence 44 499995 88999842210 01112579999998776 89999999999999998 3479999999
Q ss_pred EEeCCCCeEEEeeeccccccCC-----CcceeEE
Q 025274 157 IRNINCKPFSFSIAYHTYFAIS-----DISEVRI 185 (255)
Q Consensus 157 V~N~g~~~~pf~~g~HpYF~v~-----d~~~~~v 185 (255)
++|+++++|||++|+||||+++ ++.+..+
T Consensus 522 ~~n~~~~~~p~~~~~H~yFnl~~~~~~~~~~~~l 555 (699)
T 1z45_A 522 GKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEI 555 (699)
T ss_dssp EEEEESSEEECBCEECCEECTTTTSCSSSTTEEE
T ss_pred EEecCCCCceecccccceEeecCCCCCCccccEE
Confidence 9999999999999999999998 3555555
No 16
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=99.60 E-value=3.7e-15 Score=138.39 Aligned_cols=158 Identities=19% Similarity=0.218 Sum_probs=114.4
Q ss_pred CCcceEEEEec----CCCeeEEEEECCCceEEEEe-cCCcEEEEEEeCCCeEEEecCCccccCCCCcc----cCCccee-
Q 025274 9 DHRAAVEVTKD----RNGIEQVVLRNPRGASAKIS-LHGGQALSWRTERGEELLFTSTKAIFKPPHAV----RGGIPIC- 78 (255)
Q Consensus 9 ~~~~~~~~~~~----~~gl~~v~L~~~~~~~a~V~-~~GA~v~s~~~~~g~e~L~~~~~a~~~~~~~i----rgGiPv~- 78 (255)
+....++...- ..|+..++|+|+.+++++|. ..|+.|.+++. +|.++.|.++.+.+..+..+ |+|.+.+
T Consensus 30 ~q~~~v~~~~l~~G~~~G~~~l~i~ng~gl~~~VlP~rG~dI~~~~~-~g~~l~w~s~~~~~~~P~~~~~~~~~g~~~l~ 108 (384)
T 3ty1_A 30 DHAFSIEQKVLHGGKQEGSKILTIHSKDGLTITLSPTRGMNLLRIEG-FGSRMGWDSPVKEVVNPAFINLESRNGLGWLE 108 (384)
T ss_dssp SSCEEEEEEECCSGGGTTCEEEEEEESSSCEEEEEGGGTTEEEEEEE-TTEEECCCCSCCSCCCGGGCCTTHHHHTGGGG
T ss_pred ccceeEEEEEEcCCCccCeEEEEEECCCccEEEEecccCCcceeEEE-CCEEeeecCCcccCcCccccccccCCCCchhh
Confidence 34456666654 34899999999966888775 59999999998 58999999883334332211 3444333
Q ss_pred ----------ccccCCCC-----CCCCceeecccCe-----EEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEE
Q 025274 79 ----------FPQFGNRG-----SLEQHGFARNRSW-----VIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFE 138 (255)
Q Consensus 79 ----------fP~fg~~~-----~~~~HGfaR~~~W-----~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~ 138 (255)
++++|... ..+.||++++.+| ++++. +...++++....+....+|||.++
T Consensus 109 ~f~g~~~~cGl~~~G~P~~~~G~~~~LHG~~~~~pa~~~~~~~~~~----------~~~~i~l~g~~~~~~~~G~~~~l~ 178 (384)
T 3ty1_A 109 GFNEMMVRCGYEWTGHPVTADGQIYTLHGKAGNTPASLVEVEVADS----------APYEIRIRGLVKESTFKKADLQTL 178 (384)
T ss_dssp TCCCSEEEEEESCCSSCEEETTEEECTTCSGGGSCCSEEEEEEESS----------TTCCEEEEEEEEEEETTTEEEEEE
T ss_pred cCCeeEeeccCcccCCCCCcCCccccccccccCCCcceeEEEecCC----------CceEEEEEEEEEEeeeccCCEEEE
Confidence 23344321 2589999999994 44432 134566665554455778888888
Q ss_pred EEEEEEEeCCCcEEEEEEEEeCCCCeEEEeeeccccccCC
Q 025274 139 FRLRVSLAADGNLALISRIRNINCKPFSFSIAYHTYFAIS 178 (255)
Q Consensus 139 l~~t~~L~~~~~L~i~~~V~N~g~~~~pf~~g~HpYF~v~ 178 (255)
.+++|++.+ ++|+++.+|+|.|++||||++++|+||..|
T Consensus 179 ~~i~~~l~~-~~l~i~~~VtN~g~~p~P~~~~~H~nfg~P 217 (384)
T 3ty1_A 179 TELRYVPGS-NSFSLHDVLTNHADYPHDYQIIYHSNFGTP 217 (384)
T ss_dssp EEEEECTTC-SEEEEEEEEEECSSSCEEEEEEEEEEECTT
T ss_pred EEEEEEeCC-CEEEEEEEEEECCCCCCchheecccccCCC
Confidence 888888877 789999999999999999999999999987
No 17
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=94.75 E-value=0.46 Score=41.30 Aligned_cols=125 Identities=14% Similarity=0.150 Sum_probs=69.9
Q ss_pred eEEEEECCCceEEEEecCCcEEEEEEeC-------CCeEEEecCCccccCCCCcccCCcceeccccCCCC-CCCCceeec
Q 025274 24 EQVVLRNPRGASAKISLHGGQALSWRTE-------RGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG-SLEQHGFAR 95 (255)
Q Consensus 24 ~~v~L~~~~~~~a~V~~~GA~v~s~~~~-------~g~e~L~~~~~a~~~~~~~irgGiPv~fP~fg~~~-~~~~HGfaR 95 (255)
+.++|+++. .+++|+..||.|.++... ++.++..+++.. . ..-+.-+-|.+..+ ..+.|.= |
T Consensus 4 ~~i~v~td~-l~~~is~~GG~I~~~~Lk~Y~~~~~~~~pv~Ll~~~~--~------~~y~a~~gl~~~~g~~~~~~~~-~ 73 (280)
T 3bs6_A 4 KLISVKTDV-LDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSP--Q------FIYQAQSGLTGRDGPDNPANGP-R 73 (280)
T ss_dssp CEEEEECSS-CEEEEETBTTEEEEEEEEEEESSTTCCSEEEEEEEET--T------EEEEEEEEEESTTCTTSGGGSS-C
T ss_pred CEEEEECCc-EEEEEECCCCeEeeeEcCCCcchhcCCCCEEEccCCC--C------CeeEEEEeeeccCCCCCCCCCC-c
Confidence 358899986 999999999999998741 112332222211 0 00112222333321 2223321 2
Q ss_pred ccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEeC-CCcEEEEEEEEeCCCCeEEEee
Q 025274 96 NRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAA-DGNLALISRIRNINCKPFSFSI 169 (255)
Q Consensus 96 ~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~-~~~L~i~~~V~N~g~~~~pf~~ 169 (255)
..|++....... .++++...|+|.+.... ...++.+|+|.. +-.+.++++|+|.+++++.+.+
T Consensus 74 -~~f~~~~~~~~l--~~~~~~~~Vtlt~~~~~--------G~~~~ktytf~~~~Y~i~v~~~v~N~s~~~~~~~~ 137 (280)
T 3bs6_A 74 -PLYNVEKDAYVL--AEGQNELQVPMTYTDAA--------GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISS 137 (280)
T ss_dssp -CBCBCSCSEEEC--CTTCSEEEEEEEEECTT--------CCEEEEEEEEETTCCEEEEEEEEECCSSSCEEEEE
T ss_pred -eeEEecCCceec--cCCCceeEEEEEEECCC--------CeEEEEEEEEcCCceEEEEEEEEEcCCCCceeEee
Confidence 457764211000 01212467777776432 257889999974 4568888889999988776543
No 18
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=93.30 E-value=1.2 Score=39.71 Aligned_cols=123 Identities=14% Similarity=0.142 Sum_probs=66.7
Q ss_pred eEEEEECCCceEEEEecCCcEEEEEEeC-------CCeEEEecCCccccCCCCcccCCcceeccccCCCC-CCCCceeec
Q 025274 24 EQVVLRNPRGASAKISLHGGQALSWRTE-------RGEELLFTSTKAIFKPPHAVRGGIPICFPQFGNRG-SLEQHGFAR 95 (255)
Q Consensus 24 ~~v~L~~~~~~~a~V~~~GA~v~s~~~~-------~g~e~L~~~~~a~~~~~~~irgGiPv~fP~fg~~~-~~~~HGfaR 95 (255)
+.++|+++. .+++|+..||.|.++... ++.++...++... ..-+.-.-|.+..+ ..+.|+- |
T Consensus 35 ~~i~V~td~-l~~~is~~GG~I~~~~Lk~Y~~~~~~~~pv~Ll~~~~~--------~~y~a~~gl~~~~g~~~~~~~~-~ 104 (330)
T 3blc_A 35 KLISVKTDV-LDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQ--------FIYQAQSGLTGRDGPDNPANGP-R 104 (330)
T ss_dssp CEEEEECSS-CEEEEETBTCCEEEEEEEEEESSTTCSSEEEEEEECSS--------CEEEEEEEEESTTCTTSGGGCS-C
T ss_pred CEEEEECCc-EEEEEECCCCEEeEEECCCCcccccCCCCeEEecCCCC--------ceeEeeeeeeccCCCCCCCCCC-c
Confidence 578999986 999999999999998741 1123222222110 00011111223211 1223322 3
Q ss_pred ccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCeeEEEEEEEEEeC-CCcEEEEEEEEeCCCCeEEE
Q 025274 96 NRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAA-DGNLALISRIRNINCKPFSF 167 (255)
Q Consensus 96 ~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~-~~~L~i~~~V~N~g~~~~pf 167 (255)
. .|++......+ .++++...|+|.+.... ...++.+|+|.. +-.+.++++|+|.+++++..
T Consensus 105 ~-~f~~~~~~~~L--~~~~~~~~v~lt~~~~~--------G~~v~k~ytf~~~~Y~i~v~~~v~N~s~~~~~~ 166 (330)
T 3blc_A 105 P-LYNVEKDAYVL--AEGQNELQVPMTYTDAA--------GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEI 166 (330)
T ss_dssp C-BCBCSCSEEEC--CTTCCEEEEEEEEECTT--------SCEEEEEEEEETTCCEEEEEEEEECCSSSCEEE
T ss_pred c-eeEecCCceec--cCCCceEEEEEEEECCC--------CeEEEEEEEEcCCceEEEEEEEEEcCCCCccee
Confidence 3 37654211000 01112456777765422 257889999974 34688888999999887654
No 19
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=79.18 E-value=1.8 Score=31.98 Aligned_cols=31 Identities=23% Similarity=0.374 Sum_probs=22.2
Q ss_pred EEEeCCCcEEEEEEEEeCCCCeEEEeeecccccc
Q 025274 143 VSLAADGNLALISRIRNINCKPFSFSIAYHTYFA 176 (255)
Q Consensus 143 ~~L~~~~~L~i~~~V~N~g~~~~pf~~g~HpYF~ 176 (255)
++|.. +.=+++++|+|+||.| ++.|-|-.|.
T Consensus 13 I~lN~-gr~~~~l~V~NtGDRP--IQVGSHyHF~ 43 (101)
T 4ep8_B 13 IALNT-GRATCRVVVENHGDRP--IQVGSHYHFA 43 (101)
T ss_dssp EECST-TCCEEEEEEEECSSSC--EEEETTSCGG
T ss_pred EEEcC-CCCEEEEEEEeCCCcc--eEEccccChh
Confidence 46665 4567888999999985 5566666664
No 20
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=71.93 E-value=2.8 Score=32.16 Aligned_cols=30 Identities=23% Similarity=0.441 Sum_probs=21.7
Q ss_pred EEEeCCCcEEEEEEEEeCCCCeEEEeeeccccc
Q 025274 143 VSLAADGNLALISRIRNINCKPFSFSIAYHTYF 175 (255)
Q Consensus 143 ~~L~~~~~L~i~~~V~N~g~~~~pf~~g~HpYF 175 (255)
++|.. +.=+++++|+|+||.| ++.|-|-.|
T Consensus 19 I~lN~-gr~~~~l~V~NtGDRP--IQVGSHyHF 48 (126)
T 4ac7_B 19 IEINA-GREKTTIRVSNTGDRP--IQVGSHIHF 48 (126)
T ss_dssp EETTT-TSCEEEEEEEECSSSC--EEEETTSCG
T ss_pred EEeCC-CCcEEEEEEEeCCCCC--EEEccccch
Confidence 56665 4567889999999985 555666555
No 21
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=71.93 E-value=2.8 Score=32.16 Aligned_cols=30 Identities=23% Similarity=0.441 Sum_probs=21.7
Q ss_pred EEEeCCCcEEEEEEEEeCCCCeEEEeeeccccc
Q 025274 143 VSLAADGNLALISRIRNINCKPFSFSIAYHTYF 175 (255)
Q Consensus 143 ~~L~~~~~L~i~~~V~N~g~~~~pf~~g~HpYF 175 (255)
++|.. +.=+++++|+|+||.| ++.|-|-.|
T Consensus 19 I~lN~-gr~~~~l~V~NtGDRP--IQVGSHyHF 48 (126)
T 4ubp_B 19 IEINA-GREKTTIRVSNTGDRP--IQVGSHIHF 48 (126)
T ss_dssp EETTT-TSCEEEEEEEECSSSC--EEEETTSCG
T ss_pred EEeCC-CCcEEEEEEEeCCCCC--EEEccccch
Confidence 56665 4567889999999985 555666555
No 22
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=71.40 E-value=9.5 Score=29.02 Aligned_cols=48 Identities=8% Similarity=0.120 Sum_probs=31.4
Q ss_pred EEEEEEEEEeCCCcEEEEEEEEeCCCCeEEEeeeccccccCCCcceeEEecCCCC
Q 025274 137 FEFRLRVSLAADGNLALISRIRNINCKPFSFSIAYHTYFAISDISEVRIEGLETL 191 (255)
Q Consensus 137 f~l~~t~~L~~~~~L~i~~~V~N~g~~~~pf~~g~HpYF~v~d~~~~~v~gl~g~ 191 (255)
..++++..-.+ +.+.++++|+|.+++++.+.+. -+-.-++.|...+|.
T Consensus 7 l~~~v~~~~~g-~~v~~~ltv~N~s~~~v~l~f~------Sgq~~Df~v~d~~G~ 54 (120)
T 3isy_A 7 VVLSIDAIQEP-EQIKFNMSLKNQSERAIEFQFS------TGQKFELVVYDSEHK 54 (120)
T ss_dssp EEEEEEEEECS-SCEEEEEEEEECSSSCEEEEES------SSCCEEEEEECTTCC
T ss_pred EEEEEeeccCC-CeEEEEEEEEcCCCCcEEEEeC------CCCEEEEEEECCCCC
Confidence 44555555544 6899999999999998888742 112225666555553
No 23
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=52.87 E-value=14 Score=33.48 Aligned_cols=29 Identities=10% Similarity=0.116 Sum_probs=23.8
Q ss_pred EEEEEEEeCCCcEEEEEEEEeCCCCeEEEe
Q 025274 139 FRLRVSLAADGNLALISRIRNINCKPFSFS 168 (255)
Q Consensus 139 l~~t~~L~~~~~L~i~~~V~N~g~~~~pf~ 168 (255)
...+|++-+ .+|+++++|+|.|++|..+.
T Consensus 255 ~~A~Y~vpg-R~l~~~~~VtN~g~~pvrlg 283 (382)
T 1yew_A 255 EDATYRVPG-RAMRMKLTITNHGNSPIRLG 283 (382)
T ss_dssp EEEEEESSC-SEEEEEEEEEECSSSCEEEE
T ss_pred eccEEecCC-cEEEEEEEEEcCCCCceEee
Confidence 345777765 78999999999999998654
No 24
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=50.55 E-value=13 Score=33.96 Aligned_cols=29 Identities=10% Similarity=0.167 Sum_probs=23.7
Q ss_pred EEEEEEEeCCCcEEEEEEEEeCCCCeEEEe
Q 025274 139 FRLRVSLAADGNLALISRIRNINCKPFSFS 168 (255)
Q Consensus 139 l~~t~~L~~~~~L~i~~~V~N~g~~~~pf~ 168 (255)
...+|.+-+ .+|+++++|+|+|++|..++
T Consensus 289 ~~A~Y~vpg-R~l~~~~~VtN~g~~pvrlg 317 (419)
T 3rfr_A 289 NGGVYKVPG-RELTINVKVKNGTSQPVRLG 317 (419)
T ss_dssp EEEEEESSS-SEEEEEEEEECCSSSCBEEE
T ss_pred eceEEecCC-cEEEEEEEEecCCCCceEEe
Confidence 345777766 78999999999999998654
No 25
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=49.83 E-value=8.2 Score=32.44 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=21.4
Q ss_pred EEEEeCCCcEEEEEEEEeCCCCeEEEeeeccccc
Q 025274 142 RVSLAADGNLALISRIRNINCKPFSFSIAYHTYF 175 (255)
Q Consensus 142 t~~L~~~~~L~i~~~V~N~g~~~~pf~~g~HpYF 175 (255)
.++|.. +.=+++++|+|+||.|+ +.|-|-.|
T Consensus 117 ~I~lN~-gr~~~~l~V~NtGDRPI--QVGSHyHF 147 (225)
T 3qga_A 117 DIELNA-GKEITELKVTNKGPKSL--HVGSHFHF 147 (225)
T ss_dssp CEETTT-TCCCEEEEEEECSSSCE--EEETTSCG
T ss_pred ceecCC-CCceEEEEEEECCCCce--eeccccch
Confidence 356665 45667889999999955 55566555
No 26
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=46.38 E-value=8.7 Score=32.53 Aligned_cols=41 Identities=20% Similarity=0.425 Sum_probs=25.1
Q ss_pred cCCeeEEE-EEEEEEeCCCcEEEEEEEEeCCCCeEEEeeeccccc
Q 025274 132 IWPHSFEF-RLRVSLAADGNLALISRIRNINCKPFSFSIAYHTYF 175 (255)
Q Consensus 132 ~~P~~f~l-~~t~~L~~~~~L~i~~~V~N~g~~~~pf~~g~HpYF 175 (255)
+-|..+.. .=.+.|.. +.=+++++|+|+||.|+ +.|-|-.|
T Consensus 106 miPGei~~~~g~I~lN~-gr~~~~l~V~NtGDRPI--QVGSHyHF 147 (238)
T 1e9y_A 106 LVPGELFLKNEDITINE-GKKAVSVKVKNVGDRPV--QIGSHFHF 147 (238)
T ss_dssp CCTTCEECCSCEEETTT-TCCCCEEEEEECSSSCE--EEETTSCG
T ss_pred CCCCeEEcCCCCeeeCC-CCCeEEEEEEeCCCCce--Eeccccch
Confidence 44555432 11366665 34567889999999955 55556555
No 27
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=42.96 E-value=74 Score=31.20 Aligned_cols=56 Identities=13% Similarity=0.181 Sum_probs=38.7
Q ss_pred ceEEEEEeecCccccccCCeeEEEEEEEEEeC-CCcEEEEEEEEeCCCCeEEEeeeccccccCC
Q 025274 116 KVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAA-DGNLALISRIRNINCKPFSFSIAYHTYFAIS 178 (255)
Q Consensus 116 ~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~-~~~L~i~~~V~N~g~~~~pf~~g~HpYF~v~ 178 (255)
..++++.|.+... .+++++.|++.+ ..-++...+++|+|++++.+.-..-.-+.++
T Consensus 130 ~~~l~i~l~D~~~-------~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~~~l~~~~s~~l~~~ 186 (720)
T 2yfo_A 130 AQTLEIVLADENA-------QVEVHLLYGVLEENDVITRSVRIKNTGTGQITIEKAAAACLDFV 186 (720)
T ss_dssp EEEEEEEEEETTT-------TEEEEEEEEEETTTTEEEEEEEEEECSSSCEEEEEEEEEEEEES
T ss_pred CcEEEEEEEECCC-------CEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeeeecccccCC
Confidence 5568888876422 467888888875 2468888999999998877655443333343
No 28
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=42.59 E-value=73 Score=31.26 Aligned_cols=58 Identities=10% Similarity=0.106 Sum_probs=40.9
Q ss_pred CceEEEEEeecCccccccCCeeEEEEEEEEEeCC-CcEEEEEEEEeCCCCeEEEeeeccccccCCC
Q 025274 115 GKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAAD-GNLALISRIRNINCKPFSFSIAYHTYFAISD 179 (255)
Q Consensus 115 ~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~-~~L~i~~~V~N~g~~~~pf~~g~HpYF~v~d 179 (255)
+..++++.|.+.. ..+++++.|++-++ .-|+...+|+|+|++++.+.-..-..+.+++
T Consensus 129 ~~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~~~~s~~l~~~~ 187 (729)
T 4fnq_A 129 EAETLEIVLGDAL-------IGLEVTLQYTAYEKWNVITRAARFENKGGERLKLLRALSMSVDFPT 187 (729)
T ss_dssp GEEEEEEEEEETT-------TTEEEEEEEEEESSSSEEEEEEEEEECSSSCEEEEEEEEEEEEESC
T ss_pred CceEEEEEEEeCC-------CCeEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeEeeeecCcCCC
Confidence 4667888887643 24678888888542 4578889999999999887655555455553
No 29
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=36.35 E-value=29 Score=34.83 Aligned_cols=31 Identities=23% Similarity=0.416 Sum_probs=22.7
Q ss_pred EEEEeCCCcEEEEEEEEeCCCCeEEEeeeccccc
Q 025274 142 RVSLAADGNLALISRIRNINCKPFSFSIAYHTYF 175 (255)
Q Consensus 142 t~~L~~~~~L~i~~~V~N~g~~~~pf~~g~HpYF 175 (255)
.++|.. +.=+++++|+|+||.|+ +.|-|-.|
T Consensus 143 ~~~~~~-~~~~~~~~v~~~~~r~~--~v~sh~hf 173 (840)
T 4gy7_A 143 CLTLNI-GRKAVILKVTSKGDRPI--QVGSHYHF 173 (840)
T ss_dssp EEECSC-SCEEEEEEEEECCSSCE--EEETTSCG
T ss_pred ceEecC-CCceEEEEEEeCCCCce--Eeccccch
Confidence 456666 56789999999999955 55556555
No 30
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=33.82 E-value=88 Score=30.70 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=37.6
Q ss_pred ceEEEEEeecCccccccCCeeEEEEEEEEEeCC-CcEEEEEEEEeCCCCeEEEeeeccccccCC
Q 025274 116 KVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAAD-GNLALISRIRNINCKPFSFSIAYHTYFAIS 178 (255)
Q Consensus 116 ~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~-~~L~i~~~V~N~g~~~~pf~~g~HpYF~v~ 178 (255)
...+++.|.+... .+++++.|++.++ .-++...+++|+|++++.+.-..-.-+.++
T Consensus 134 ~~~l~i~l~D~~~-------~l~v~l~y~~~~~~~~i~~~~~i~N~g~~~~~l~~~~s~~l~~p 190 (732)
T 2xn2_A 134 AQTLIVTLEDKVS-------KLEYDLLYTIYRDRPVIVRSVQVHNHGEEAVYLEKVASMQMDYV 190 (732)
T ss_dssp EEEEEEEEEETTT-------TEEEEEEEEEETTSSEEEEEEEEEECSSSCEEEEEEEEEEEEES
T ss_pred CcEEEEEEEeCCC-------CEEEEEEEEEECCCCEEEEEEEEEECcCCcEEEeEEeeccccCC
Confidence 4567777776422 4678888888762 457888999999998876654443333333
No 31
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.97 E-value=41 Score=24.72 Aligned_cols=35 Identities=26% Similarity=0.191 Sum_probs=28.1
Q ss_pred EEEeCCCcEEEEEEEEeCCCCeEEEeeeccccccCC
Q 025274 143 VSLAADGNLALISRIRNINCKPFSFSIAYHTYFAIS 178 (255)
Q Consensus 143 ~~L~~~~~L~i~~~V~N~g~~~~pf~~g~HpYF~v~ 178 (255)
...-+ ..-+.++.++|.|+.+..|.+-..+.|.+.
T Consensus 36 ~~~v~-~~~~~~~~l~N~g~~~~~f~~~~~~~F~i~ 70 (122)
T 2ys4_A 36 TCPVK-YSTQKILLVRNIGNKNAVFHIKTCRPFSIE 70 (122)
T ss_dssp SEESS-SCEEEEEEEECCSSSCEEEEEECCTTEEEE
T ss_pred CeecC-CeEEEEEEEEECCCCCEEEEEecCCCeEEE
Confidence 34444 567888899999999999999888888774
No 32
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=32.40 E-value=1.1e+02 Score=30.30 Aligned_cols=49 Identities=8% Similarity=0.090 Sum_probs=35.3
Q ss_pred CceEEEEEeecCccccccCCeeEEEEEEEEEeCC-CcEEEEEEEEeCCCCeEEEeee
Q 025274 115 GKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAAD-GNLALISRIRNINCKPFSFSIA 170 (255)
Q Consensus 115 ~~~~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~-~~L~i~~~V~N~g~~~~pf~~g 170 (255)
+..++++.|.+... .+++++.|++.++ .-++...+|+|+|++++.+.-.
T Consensus 130 ~~~~l~i~l~D~~~-------~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~~~ 179 (745)
T 3mi6_A 130 DAQTLVVSFNDRIT-------GLALDLNYSIFPHQDVIVKSAKFTNPSSEKLVLNRA 179 (745)
T ss_dssp CCEEEEEEEEETTT-------CCEEEEEEEEEGGGTEEEEEEEEECCSSSCEEEEEE
T ss_pred CCCEEEEEEEeCCC-------CeEEEEEEEEECCCCEEEEEEEEEECCCCCEEeeee
Confidence 35678888876432 4677778887642 4577778899999998877544
No 33
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=31.13 E-value=45 Score=29.73 Aligned_cols=19 Identities=16% Similarity=0.296 Sum_probs=15.9
Q ss_pred CcEEEEEEEEeCCCCeEEE
Q 025274 149 GNLALISRIRNINCKPFSF 167 (255)
Q Consensus 149 ~~L~i~~~V~N~g~~~~pf 167 (255)
..+.+..+|+|+|++++.+
T Consensus 36 ~~~~vk~tvtN~g~~~~~l 54 (343)
T 2x3c_A 36 DDVRVNLTLTNTGDKPIRL 54 (343)
T ss_dssp SCCEEEEEEEECSSSCEEE
T ss_pred CCeEEEEEEEeCCCCceEe
Confidence 3488899999999999765
No 34
>2wnx_A Glycoside hydrolase, family 9; cellulose degradation; 1.31A {Clostridium thermocellum} PDB: 2wo4_A 2wob_A
Probab=28.77 E-value=90 Score=24.83 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=26.5
Q ss_pred CCcEEEEEEEEeCCCCeEEEe-eeccccccCCCcc
Q 025274 148 DGNLALISRIRNINCKPFSFS-IAYHTYFAISDIS 181 (255)
Q Consensus 148 ~~~L~i~~~V~N~g~~~~pf~-~g~HpYF~v~d~~ 181 (255)
.+.+++.+.|+|+|..|+.++ +-+.=||.+++..
T Consensus 26 ~n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~ 60 (170)
T 2wnx_A 26 KNTIRATINIKNTGTTPVNLSDIKVRYWFTSDGNE 60 (170)
T ss_dssp CCEEEEEEEEEECSSSCEEGGGEEEEEEECCTTCS
T ss_pred CCEEEEEEEEEECCCCceecCcEEEEEEEcCCCCc
Confidence 367999999999999877764 7777788877643
No 35
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=26.88 E-value=75 Score=25.07 Aligned_cols=35 Identities=11% Similarity=0.343 Sum_probs=27.1
Q ss_pred CcEEEEEEEEeCCCCeEEEe-eeccccccCCCccee
Q 025274 149 GNLALISRIRNINCKPFSFS-IAYHTYFAISDISEV 183 (255)
Q Consensus 149 ~~L~i~~~V~N~g~~~~pf~-~g~HpYF~v~d~~~~ 183 (255)
+.+++.+.|+|+|..|..++ +-++=||..++....
T Consensus 24 n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~~~ 59 (160)
T 2xbt_A 24 NQIYMNMKLQNTGSSTYDLSKITIRYFYTSDDDKAL 59 (160)
T ss_dssp SSEEEEEEEEECSSCCEEGGGEEEEEEECCSSCCCE
T ss_pred CEEEEEEEEEECCCCceecCcEEEEEEEeCCCCcee
Confidence 56999999999998877764 778888888765443
No 36
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=24.66 E-value=15 Score=24.92 Aligned_cols=15 Identities=20% Similarity=0.374 Sum_probs=12.4
Q ss_pred CcccCCcceeccccC
Q 025274 69 HAVRGGIPICFPQFG 83 (255)
Q Consensus 69 ~~irgGiPv~fP~fg 83 (255)
-|||.|||++.|-=.
T Consensus 38 YPI~dGIPvmL~~Ea 52 (67)
T 2jny_A 38 YRIDDGIPVLLIDEA 52 (67)
T ss_dssp EEEETTEECCCSSCC
T ss_pred ccCCCCEeeeChhHh
Confidence 389999999999733
No 37
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=24.65 E-value=54 Score=25.75 Aligned_cols=25 Identities=20% Similarity=0.352 Sum_probs=20.2
Q ss_pred cEEEEEEEEeCCCCeEEEeeeccccccC
Q 025274 150 NLALISRIRNINCKPFSFSIAYHTYFAI 177 (255)
Q Consensus 150 ~L~i~~~V~N~g~~~~pf~~g~HpYF~v 177 (255)
=|.+.++|+|.|++++.++.- .|.+
T Consensus 48 fviV~VTIeN~g~e~~~~s~~---~F~L 72 (159)
T 3cfu_A 48 RLIIEVTMENIGEDSISYNFI---GFDL 72 (159)
T ss_dssp EEEEEEEEEECSSSCEEEEGG---GEEE
T ss_pred EEEEEEEEEECCCCceeeCcc---cEEE
Confidence 478889999999999998752 5666
No 38
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.80 E-value=1.2e+02 Score=21.42 Aligned_cols=22 Identities=9% Similarity=0.028 Sum_probs=18.4
Q ss_pred CcEEEEEEEEeCCCCeEEEeee
Q 025274 149 GNLALISRIRNINCKPFSFSIA 170 (255)
Q Consensus 149 ~~L~i~~~V~N~g~~~~pf~~g 170 (255)
...+.+++++|+|+.|+.|.+-
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~ 47 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMT 47 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEEC
T ss_pred CEEEEEEEEEECCcceEEEEEe
Confidence 4577888999999999999873
No 39
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=23.04 E-value=17 Score=24.71 Aligned_cols=15 Identities=20% Similarity=0.538 Sum_probs=12.4
Q ss_pred CcccCCcceeccccC
Q 025274 69 HAVRGGIPICFPQFG 83 (255)
Q Consensus 69 ~~irgGiPv~fP~fg 83 (255)
-|||.|||++.|-=.
T Consensus 36 YPI~dGIPvmL~~Ea 50 (68)
T 2hf1_A 36 FPIKDGIPMMLESEA 50 (68)
T ss_dssp EEEETTEECCCGGGC
T ss_pred ecCCCCeeeeChhhc
Confidence 389999999999733
No 40
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=22.94 E-value=1.9e+02 Score=28.06 Aligned_cols=48 Identities=10% Similarity=-0.061 Sum_probs=33.5
Q ss_pred EEEEEeecCccccccCCeeEEEEEEEEEeCCCcEEEEEEEEeCCCCeEEEe
Q 025274 118 YVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNLALISRIRNINCKPFSFS 168 (255)
Q Consensus 118 ~v~l~l~~~~~~~~~~P~~f~l~~t~~L~~~~~L~i~~~V~N~g~~~~pf~ 168 (255)
.++|+....- ....++...++-+|+|.. ++|.+.++++|.++.++-|.
T Consensus 526 ~~~~~~~g~~--~~~~~~~~~l~K~~~~~~-~~~~v~y~~~~~~~~~~~~~ 573 (659)
T 1k1x_A 526 GVKLWREGGV--YAEEKIPARVEKKIELTE-DGFIAKYRVLLEKPYKALFG 573 (659)
T ss_dssp EEEEEEEEEE--ESSSEEEEEEEEEEEEET-TEEEEEEEEEESSCCCEEEE
T ss_pred eEEEEEeccc--ccCCCcceEEEEEEEEcC-CEEEEEEEEeeCCCCceEEE
Confidence 4555554321 123355788888999998 68999999999887655543
No 41
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=22.77 E-value=17 Score=24.67 Aligned_cols=15 Identities=20% Similarity=0.432 Sum_probs=12.4
Q ss_pred CcccCCcceeccccC
Q 025274 69 HAVRGGIPICFPQFG 83 (255)
Q Consensus 69 ~~irgGiPv~fP~fg 83 (255)
-|||.|||++.|-=.
T Consensus 36 YPI~dGIPvmL~~Ea 50 (68)
T 2jr6_A 36 YPIKDGIPYMLENEA 50 (68)
T ss_dssp EEEETTEECCCTTTC
T ss_pred ecCCCCeeeeChhhc
Confidence 389999999999733
No 42
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=21.76 E-value=19 Score=23.48 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=12.9
Q ss_pred CcccCCcceeccccCC
Q 025274 69 HAVRGGIPICFPQFGN 84 (255)
Q Consensus 69 ~~irgGiPv~fP~fg~ 84 (255)
-|||.|||++.|--.+
T Consensus 38 YPI~dGIPvlL~~ear 53 (56)
T 2kpi_A 38 YPVRDGIPVLLVDEAR 53 (56)
T ss_dssp EEEETTEECCCTTTCB
T ss_pred EeeECCEeeeCHHHcc
Confidence 4899999999986543
No 43
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=21.67 E-value=19 Score=24.63 Aligned_cols=15 Identities=33% Similarity=0.594 Sum_probs=12.4
Q ss_pred CcccCCcceeccccC
Q 025274 69 HAVRGGIPICFPQFG 83 (255)
Q Consensus 69 ~~irgGiPv~fP~fg 83 (255)
-|||.|||++.|-=.
T Consensus 36 YPI~dGIPvmL~~Ea 50 (70)
T 2js4_A 36 FPVRDGVPIMLEAEA 50 (70)
T ss_dssp EEEETTEECCCGGGS
T ss_pred ecCCCCeeeeChhhc
Confidence 389999999999733
No 44
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=20.52 E-value=6.9e+02 Score=25.43 Aligned_cols=153 Identities=14% Similarity=0.089 Sum_probs=75.0
Q ss_pred EEEEECCCceEEEEecCCcEEEEEEeCCCeEEEecC-CccccCCCCc-ccCCcce--ecc------ccCCCCCCCCceee
Q 025274 25 QVVLRNPRGASAKISLHGGQALSWRTERGEELLFTS-TKAIFKPPHA-VRGGIPI--CFP------QFGNRGSLEQHGFA 94 (255)
Q Consensus 25 ~v~L~~~~~~~a~V~~~GA~v~s~~~~~g~e~L~~~-~~a~~~~~~~-irgGiPv--~fP------~fg~~~~~~~HGfa 94 (255)
.++++.+. .++++...-+.|.||+. +|.++|-.. ....|..... -+|+.-. +-| |-......-.|
T Consensus 746 ~~~v~~~~-~~~~f~~~~G~l~s~~~-~g~~~l~~~~~~~~wRaptdND~G~~~~~~~~~~~~~~~W~~a~~~~~~~--- 820 (1023)
T 1jz7_A 746 DFCIELGN-KRWQFNRQSGFLSQMWI-GDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEA--- 820 (1023)
T ss_dssp EEEEEETT-EEEEEETTTCSEEEEEE-TTEECEEEEEEEECCCCCCHHHHTTCBTTBCCTTSHHHHHHHHTTTTCEE---
T ss_pred eEEEEECC-EEEEEECCcceEEEEEE-CCEEeecCCCcCceEeCCcccccccccccccccccchHHHhhcCcccccc---
Confidence 44566654 78888888889999987 577777432 1234432100 0111100 001 21110000112
Q ss_pred cccCeEEEecCCCCCCCCCCCceEEEEEeecCccccccCCe-eEEEEEEEEEeCCCcEEEEEEEEeCCCCeEEEeeeccc
Q 025274 95 RNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPH-SFEFRLRVSLAADGNLALISRIRNINCKPFSFSIAYHT 173 (255)
Q Consensus 95 R~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~-~f~l~~t~~L~~~~~L~i~~~V~N~g~~~~pf~~g~Hp 173 (255)
+...+++.+.+ +...|+........ +- .+.++++|++..++.|.++++++-.+.-|..--+|+--
T Consensus 821 ~~~~~~~~~~~---------~~v~v~~~~~~~~~-----~~~~~~~~~~y~i~~~G~i~v~~~~~~~~~lp~lpr~G~~~ 886 (1023)
T 1jz7_A 821 ALLQCTADTLA---------DAVLITTAHAWQHQ-----GKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNC 886 (1023)
T ss_dssp EEEEEEEEECS---------SEEEEEEEEEEEET-----TEEEEEEEEEEEEETTSCEEEEEEEEECTTSCCCSEEEEEE
T ss_pred EEEEEEEEecC---------CeEEEEEEEEecCC-----CcceEEEEEEEEEeCCCEEEEEEEEEeCCCCCCCcEEEEEE
Confidence 22234443221 13445444432110 11 57888889998777899988887655433212222222
Q ss_pred cccCCCcceeEEecC-CCCcccccc
Q 025274 174 YFAISDISEVRIEGL-ETLDYLDNL 197 (255)
Q Consensus 174 YF~v~d~~~~~v~gl-~g~~y~D~~ 197 (255)
-+. .+.++++--|+ +.-+|.|+.
T Consensus 887 ~l~-~~~~~~~w~G~GP~EnY~Dr~ 910 (1023)
T 1jz7_A 887 QLA-QVAERVNWLGLGPQENYPDRL 910 (1023)
T ss_dssp EES-CCCSEEEEEEEESSCCBTTBC
T ss_pred EcC-ccccccEEEccCCCCCCcchh
Confidence 111 24556665443 356788864
No 45
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=20.52 E-value=21 Score=24.36 Aligned_cols=15 Identities=27% Similarity=0.549 Sum_probs=12.3
Q ss_pred CcccCCcceeccccC
Q 025274 69 HAVRGGIPICFPQFG 83 (255)
Q Consensus 69 ~~irgGiPv~fP~fg 83 (255)
-|||.|||++.|-=.
T Consensus 36 YPI~dGIPvmL~~ea 50 (69)
T 2pk7_A 36 YPIRDGIPVMLESEA 50 (69)
T ss_dssp EEEETTEECCCGGGC
T ss_pred ecCcCCeeeeChhhc
Confidence 389999999999733
Done!