Query 025278
Match_columns 255
No_of_seqs 196 out of 1908
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 04:13:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025278.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025278hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 4.3E-52 9.4E-57 347.9 20.0 243 1-253 4-267 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 5.6E-46 1.2E-50 317.0 24.5 238 1-250 1-245 (326)
3 KOG0024 Sorbitol dehydrogenase 100.0 6.1E-44 1.3E-48 291.2 18.9 241 1-250 5-277 (354)
4 KOG0023 Alcohol dehydrogenase, 100.0 8.2E-44 1.8E-48 289.8 18.1 243 2-251 11-284 (360)
5 KOG1197 Predicted quinone oxid 100.0 6.4E-43 1.4E-47 275.6 20.1 238 2-255 10-254 (336)
6 COG1062 AdhC Zn-dependent alco 100.0 1.5E-42 3.3E-47 285.3 18.7 241 1-250 3-289 (366)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 5.8E-41 1.3E-45 292.6 23.7 243 1-250 1-294 (371)
8 cd08239 THR_DH_like L-threonin 100.0 1.4E-40 3E-45 286.9 24.3 241 1-250 1-266 (339)
9 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.4E-40 2.9E-45 289.1 23.3 240 1-250 2-280 (358)
10 PLN02740 Alcohol dehydrogenase 100.0 2.5E-40 5.5E-45 289.5 23.9 242 1-250 11-304 (381)
11 PRK09880 L-idonate 5-dehydroge 100.0 3.4E-40 7.5E-45 284.9 23.8 238 1-250 5-270 (343)
12 TIGR02818 adh_III_F_hyde S-(hy 100.0 7.5E-40 1.6E-44 285.3 24.7 240 1-249 2-290 (368)
13 TIGR02822 adh_fam_2 zinc-bindi 100.0 2.7E-39 6E-44 277.7 25.1 238 3-250 1-258 (329)
14 TIGR02819 fdhA_non_GSH formald 100.0 5.9E-39 1.3E-43 281.3 24.7 238 1-249 3-302 (393)
15 cd08300 alcohol_DH_class_III c 100.0 7.7E-39 1.7E-43 279.0 24.0 240 1-249 3-291 (368)
16 cd08301 alcohol_DH_plants Plan 100.0 1.2E-38 2.7E-43 277.8 24.3 241 1-250 3-293 (369)
17 cd08230 glucose_DH Glucose deh 100.0 1.3E-38 2.9E-43 276.3 23.9 239 1-250 1-273 (355)
18 PLN02586 probable cinnamyl alc 100.0 1.3E-38 2.8E-43 276.7 23.4 243 1-250 11-282 (360)
19 KOG0022 Alcohol dehydrogenase, 100.0 3.6E-39 7.7E-44 261.6 18.0 243 1-250 8-298 (375)
20 PLN02827 Alcohol dehydrogenase 100.0 2.1E-38 4.5E-43 277.0 24.0 238 1-250 13-299 (378)
21 cd08237 ribitol-5-phosphate_DH 100.0 1.4E-38 3.1E-43 274.6 21.7 234 2-251 4-261 (341)
22 cd08277 liver_alcohol_DH_like 100.0 6.8E-38 1.5E-42 272.8 25.1 241 1-250 3-290 (365)
23 TIGR01202 bchC 2-desacetyl-2-h 100.0 4.2E-38 9.2E-43 268.0 21.8 231 1-250 2-235 (308)
24 COG1063 Tdh Threonine dehydrog 100.0 1.4E-37 3.1E-42 268.4 22.9 242 1-252 1-275 (350)
25 cd08291 ETR_like_1 2-enoyl thi 100.0 3.1E-37 6.7E-42 264.5 24.6 236 1-250 1-246 (324)
26 PLN02178 cinnamyl-alcohol dehy 100.0 2.8E-37 6E-42 269.4 24.0 243 2-251 6-278 (375)
27 PRK10309 galactitol-1-phosphat 100.0 3.3E-37 7.2E-42 266.7 24.1 239 1-251 1-265 (347)
28 cd08292 ETR_like_2 2-enoyl thi 100.0 1.9E-36 4E-41 259.2 25.4 235 1-249 1-241 (324)
29 TIGR03201 dearomat_had 6-hydro 100.0 6.9E-37 1.5E-41 264.9 23.0 238 4-250 2-276 (349)
30 PLN02514 cinnamyl-alcohol dehy 100.0 1.2E-36 2.6E-41 264.1 24.4 241 1-250 10-279 (357)
31 KOG0025 Zn2+-binding dehydroge 100.0 6.6E-37 1.4E-41 245.6 19.3 236 2-250 21-267 (354)
32 cd08233 butanediol_DH_like (2R 100.0 2.9E-36 6.3E-41 261.2 24.2 241 1-250 1-276 (351)
33 cd08296 CAD_like Cinnamyl alco 100.0 6.8E-36 1.5E-40 257.1 25.7 241 1-250 1-263 (333)
34 cd08299 alcohol_DH_class_I_II_ 100.0 2.2E-35 4.8E-40 257.6 24.2 241 1-250 8-296 (373)
35 cd08285 NADP_ADH NADP(H)-depen 100.0 3.9E-35 8.4E-40 254.1 24.9 240 1-250 1-270 (351)
36 cd08238 sorbose_phosphate_red 100.0 1.7E-35 3.6E-40 261.4 22.5 241 1-247 3-289 (410)
37 cd08231 MDR_TM0436_like Hypoth 100.0 5.7E-35 1.2E-39 254.0 25.1 239 2-249 2-283 (361)
38 PRK10083 putative oxidoreducta 100.0 3.3E-35 7.1E-40 253.3 23.4 240 1-250 1-263 (339)
39 cd05284 arabinose_DH_like D-ar 100.0 1.1E-34 2.4E-39 250.0 24.2 242 1-249 1-269 (340)
40 cd08293 PTGR2 Prostaglandin re 100.0 7E-35 1.5E-39 251.9 22.1 220 14-248 21-256 (345)
41 cd08294 leukotriene_B4_DH_like 100.0 1.4E-34 3E-39 248.2 23.7 224 1-248 3-243 (329)
42 cd08295 double_bond_reductase_ 100.0 9E-35 2E-39 250.7 22.2 231 1-250 8-255 (338)
43 cd08274 MDR9 Medium chain dehy 100.0 3.9E-34 8.5E-39 247.5 25.2 244 1-249 1-276 (350)
44 cd08278 benzyl_alcohol_DH Benz 100.0 2E-34 4.4E-39 251.0 23.4 238 1-248 3-287 (365)
45 TIGR02817 adh_fam_1 zinc-bindi 100.0 2.4E-34 5.2E-39 247.5 22.8 234 2-247 1-248 (336)
46 cd08290 ETR 2-enoyl thioester 100.0 5.1E-34 1.1E-38 246.0 23.5 237 1-249 1-254 (341)
47 PRK09422 ethanol-active dehydr 100.0 8.7E-34 1.9E-38 244.3 24.2 241 1-250 1-265 (338)
48 cd08256 Zn_ADH2 Alcohol dehydr 100.0 8.7E-34 1.9E-38 245.6 24.3 241 1-250 1-278 (350)
49 PRK10754 quinone oxidoreductas 100.0 9.5E-34 2.1E-38 243.0 24.3 235 1-250 2-243 (327)
50 cd08297 CAD3 Cinnamyl alcohol 100.0 1.9E-33 4.2E-38 242.5 25.2 244 1-250 1-269 (341)
51 cd05278 FDH_like Formaldehyde 100.0 8.3E-34 1.8E-38 245.2 22.6 240 1-250 1-271 (347)
52 cd08283 FDH_like_1 Glutathione 100.0 2.2E-33 4.7E-38 246.1 25.4 240 1-250 1-310 (386)
53 cd08286 FDH_like_ADH2 formalde 100.0 1.3E-33 2.9E-38 243.9 23.7 239 1-249 1-269 (345)
54 cd08244 MDR_enoyl_red Possible 100.0 4.4E-33 9.6E-38 238.2 26.4 237 1-249 1-244 (324)
55 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 4.5E-33 9.8E-38 238.2 25.4 239 1-250 1-247 (325)
56 cd08246 crotonyl_coA_red croto 100.0 3.7E-33 7.9E-38 245.3 24.9 246 1-250 13-319 (393)
57 PLN03154 putative allyl alcoho 100.0 4.7E-33 1E-37 240.8 24.8 231 2-250 10-262 (348)
58 cd08289 MDR_yhfp_like Yhfp put 100.0 4.7E-33 1E-37 238.4 24.4 239 1-250 1-247 (326)
59 cd08270 MDR4 Medium chain dehy 100.0 8E-33 1.7E-37 234.8 25.5 225 1-249 1-225 (305)
60 cd08262 Zn_ADH8 Alcohol dehydr 100.0 4.9E-33 1.1E-37 239.9 24.4 239 1-249 1-267 (341)
61 TIGR02825 B4_12hDH leukotriene 100.0 2.3E-33 5E-38 240.6 22.2 212 14-249 17-240 (325)
62 PTZ00354 alcohol dehydrogenase 100.0 7.9E-33 1.7E-37 237.5 25.1 235 1-250 2-244 (334)
63 cd08250 Mgc45594_like Mgc45594 100.0 5.8E-33 1.3E-37 238.2 24.1 231 1-249 2-240 (329)
64 cd08249 enoyl_reductase_like e 100.0 2E-33 4.4E-38 242.3 21.3 240 1-250 1-258 (339)
65 cd08279 Zn_ADH_class_III Class 100.0 6.3E-33 1.4E-37 241.4 24.3 239 1-249 1-285 (363)
66 cd08298 CAD2 Cinnamyl alcohol 100.0 1.3E-32 2.8E-37 236.2 25.8 239 1-249 1-259 (329)
67 cd08240 6_hydroxyhexanoate_dh_ 100.0 5.4E-33 1.2E-37 240.6 23.3 243 1-250 1-278 (350)
68 TIGR01751 crot-CoA-red crotony 100.0 8.8E-33 1.9E-37 243.3 24.8 246 1-250 8-314 (398)
69 cd05283 CAD1 Cinnamyl alcohol 100.0 9E-33 2E-37 238.1 24.1 240 2-250 1-267 (337)
70 cd05279 Zn_ADH1 Liver alcohol 100.0 6.5E-33 1.4E-37 241.5 23.4 239 2-249 2-288 (365)
71 cd08260 Zn_ADH6 Alcohol dehydr 100.0 8.7E-33 1.9E-37 238.8 23.8 241 1-250 1-268 (345)
72 cd08263 Zn_ADH10 Alcohol dehyd 100.0 7.7E-33 1.7E-37 241.2 23.1 239 1-249 1-290 (367)
73 cd08242 MDR_like Medium chain 100.0 1.3E-32 2.9E-37 235.2 24.2 229 1-249 1-248 (319)
74 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.8E-32 4E-37 235.7 25.1 242 1-249 1-266 (338)
75 cd08284 FDH_like_2 Glutathione 100.0 1E-32 2.2E-37 238.2 23.4 237 1-249 1-269 (344)
76 cd08282 PFDH_like Pseudomonas 100.0 2E-32 4.4E-37 239.2 25.2 237 1-249 1-288 (375)
77 cd08235 iditol_2_DH_like L-idi 100.0 2.3E-32 4.9E-37 235.9 24.7 239 1-250 1-269 (343)
78 cd08252 AL_MDR Arginate lyase 100.0 2.2E-32 4.8E-37 235.2 24.4 236 1-248 1-250 (336)
79 cd08261 Zn_ADH7 Alcohol dehydr 100.0 2.5E-32 5.4E-37 235.3 24.0 237 1-249 1-261 (337)
80 PRK05396 tdh L-threonine 3-deh 100.0 2.5E-32 5.5E-37 235.6 23.9 241 1-250 1-267 (341)
81 TIGR02823 oxido_YhdH putative 100.0 4.8E-32 1E-36 232.0 25.3 238 2-250 1-245 (323)
82 cd08287 FDH_like_ADH3 formalde 100.0 2.9E-32 6.3E-37 235.5 24.1 239 1-250 1-272 (345)
83 cd08248 RTN4I1 Human Reticulon 100.0 2.4E-32 5.1E-37 236.4 22.7 237 1-248 1-259 (350)
84 PRK13771 putative alcohol dehy 100.0 1.8E-32 4E-37 235.7 21.8 239 1-250 1-259 (334)
85 cd08259 Zn_ADH5 Alcohol dehydr 100.0 5.2E-32 1.1E-36 232.3 24.5 240 1-250 1-260 (332)
86 cd08236 sugar_DH NAD(P)-depend 100.0 4.1E-32 8.9E-37 234.4 23.5 238 1-250 1-262 (343)
87 cd08243 quinone_oxidoreductase 100.0 7.2E-32 1.6E-36 230.0 24.4 236 1-249 1-241 (320)
88 cd08234 threonine_DH_like L-th 100.0 7.9E-32 1.7E-36 231.7 24.6 237 1-249 1-260 (334)
89 cd08264 Zn_ADH_like2 Alcohol d 100.0 3.9E-32 8.4E-37 232.8 22.6 235 1-248 1-255 (325)
90 cd08276 MDR7 Medium chain dehy 100.0 4.2E-31 9.1E-36 226.8 26.4 243 1-250 1-263 (336)
91 cd08288 MDR_yhdh Yhdh putative 100.0 3.2E-31 6.9E-36 226.9 25.5 238 1-249 1-245 (324)
92 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.6E-31 5.6E-36 226.1 24.1 240 1-250 1-268 (306)
93 cd05276 p53_inducible_oxidored 100.0 3.6E-31 7.7E-36 225.2 24.6 235 1-250 1-242 (323)
94 cd05285 sorbitol_DH Sorbitol d 100.0 3.6E-31 7.8E-36 228.6 23.3 239 3-250 1-269 (343)
95 KOG1198 Zinc-binding oxidoredu 100.0 5.5E-31 1.2E-35 225.3 22.8 224 17-252 20-261 (347)
96 cd08245 CAD Cinnamyl alcohol d 100.0 1.1E-30 2.4E-35 224.3 24.3 239 2-249 1-259 (330)
97 cd08232 idonate-5-DH L-idonate 100.0 6.4E-31 1.4E-35 226.6 22.9 236 5-249 2-265 (339)
98 cd05281 TDH Threonine dehydrog 100.0 8.1E-31 1.8E-35 226.3 23.3 241 1-250 1-266 (341)
99 cd05282 ETR_like 2-enoyl thioe 100.0 7.8E-31 1.7E-35 224.2 23.0 231 5-250 2-241 (323)
100 PLN02702 L-idonate 5-dehydroge 100.0 1.5E-30 3.2E-35 226.6 24.8 240 2-250 19-289 (364)
101 cd08273 MDR8 Medium chain dehy 100.0 1.9E-30 4.2E-35 222.6 25.2 232 2-250 2-237 (331)
102 cd08272 MDR6 Medium chain dehy 100.0 1.4E-30 3.1E-35 222.3 23.9 236 1-248 1-243 (326)
103 cd08266 Zn_ADH_like1 Alcohol d 100.0 2.9E-30 6.3E-35 221.8 25.4 244 1-250 1-269 (342)
104 cd08253 zeta_crystallin Zeta-c 100.0 2.2E-30 4.9E-35 220.7 24.3 239 1-249 1-246 (325)
105 cd05289 MDR_like_2 alcohol deh 100.0 2.8E-30 6.1E-35 218.7 23.8 238 1-250 1-242 (309)
106 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3.3E-30 7.2E-35 225.9 24.6 230 16-250 39-311 (384)
107 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.9E-30 4.2E-35 220.8 22.4 219 15-249 6-232 (312)
108 cd05286 QOR2 Quinone oxidoredu 100.0 8.3E-30 1.8E-34 216.6 25.1 232 2-250 1-239 (320)
109 cd08271 MDR5 Medium chain dehy 100.0 8.6E-30 1.9E-34 217.6 25.2 234 1-248 1-241 (325)
110 cd08247 AST1_like AST1 is a cy 100.0 1.1E-29 2.3E-34 220.2 24.9 238 1-246 1-259 (352)
111 TIGR00692 tdh L-threonine 3-de 100.0 4.7E-30 1E-34 221.4 22.6 235 6-249 4-264 (340)
112 TIGR02824 quinone_pig3 putativ 100.0 2.6E-29 5.7E-34 214.2 24.9 234 1-249 1-241 (325)
113 cd08268 MDR2 Medium chain dehy 100.0 2.7E-29 5.8E-34 214.4 24.9 239 1-249 1-246 (328)
114 cd05288 PGDH Prostaglandin deh 100.0 2.3E-29 4.9E-34 215.9 23.5 231 2-250 3-248 (329)
115 COG2130 Putative NADP-dependen 100.0 4.6E-30 1E-34 208.1 17.8 217 14-250 25-253 (340)
116 cd08267 MDR1 Medium chain dehy 100.0 5.9E-29 1.3E-33 211.9 24.2 235 5-250 2-244 (319)
117 TIGR03366 HpnZ_proposed putati 100.0 1E-29 2.2E-34 213.8 18.2 184 63-249 1-221 (280)
118 cd05188 MDR Medium chain reduc 100.0 5E-29 1.1E-33 207.4 21.7 216 31-250 1-236 (271)
119 cd08241 QOR1 Quinone oxidoredu 100.0 1.6E-28 3.6E-33 209.0 25.3 234 1-250 1-242 (323)
120 cd08251 polyketide_synthase po 100.0 1E-28 2.2E-33 208.7 22.1 215 24-249 2-222 (303)
121 cd08275 MDR3 Medium chain dehy 100.0 9.9E-28 2.1E-32 205.9 24.9 232 2-249 1-239 (337)
122 cd05195 enoyl_red enoyl reduct 100.0 4E-27 8.7E-32 197.3 20.9 203 30-249 1-212 (293)
123 smart00829 PKS_ER Enoylreducta 99.9 2.9E-26 6.3E-31 191.9 19.6 198 34-249 2-208 (288)
124 KOG1196 Predicted NAD-dependen 99.9 5.6E-24 1.2E-28 172.3 19.5 208 25-250 33-257 (343)
125 cd08255 2-desacetyl-2-hydroxye 99.9 4E-24 8.6E-29 179.2 17.0 176 57-250 17-194 (277)
126 KOG1202 Animal-type fatty acid 99.8 6.8E-21 1.5E-25 176.0 8.6 216 10-249 1424-1658(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.8 2E-19 4.3E-24 129.9 10.3 91 29-120 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.4 2.1E-13 4.5E-18 101.3 5.6 86 162-249 1-92 (130)
129 PRK09424 pntA NAD(P) transhydr 99.1 5.9E-10 1.3E-14 99.9 10.6 98 148-248 162-287 (509)
130 cd00401 AdoHcyase S-adenosyl-L 98.9 4E-09 8.7E-14 92.4 9.0 103 139-250 188-293 (413)
131 PRK05476 S-adenosyl-L-homocyst 98.6 2E-07 4.3E-12 82.0 8.7 105 138-251 197-304 (425)
132 TIGR00561 pntA NAD(P) transhyd 98.5 8E-07 1.7E-11 79.8 9.5 98 149-249 162-287 (511)
133 TIGR00936 ahcY adenosylhomocys 98.4 1.7E-06 3.6E-11 75.9 8.6 103 139-250 181-286 (406)
134 PRK08306 dipicolinate synthase 98.3 5.5E-06 1.2E-10 70.1 11.0 96 150-251 151-246 (296)
135 PLN02494 adenosylhomocysteinas 98.3 1.8E-06 3.8E-11 76.5 7.5 94 149-251 252-346 (477)
136 PRK12771 putative glutamate sy 98.2 1.8E-06 3.9E-11 79.7 6.3 80 147-228 133-236 (564)
137 cd05213 NAD_bind_Glutamyl_tRNA 98.2 3E-06 6.5E-11 72.4 5.5 107 116-227 140-251 (311)
138 PRK00517 prmA ribosomal protei 98.1 2.8E-05 6E-10 64.3 9.1 146 80-250 65-217 (250)
139 COG0300 DltE Short-chain dehyd 98.0 2.9E-05 6.2E-10 64.1 8.9 105 149-254 4-150 (265)
140 COG4221 Short-chain alcohol de 98.0 3E-05 6.6E-10 62.6 8.7 101 150-251 5-144 (246)
141 PTZ00075 Adenosylhomocysteinas 98.0 5.8E-05 1.3E-09 67.2 10.4 93 148-249 251-344 (476)
142 PRK00045 hemA glutamyl-tRNA re 97.9 4.5E-05 9.7E-10 67.9 7.6 153 63-229 91-257 (423)
143 TIGR00518 alaDH alanine dehydr 97.8 9.7E-05 2.1E-09 64.6 9.1 97 151-250 167-271 (370)
144 PF01488 Shikimate_DH: Shikima 97.8 4.5E-05 9.7E-10 56.9 5.8 97 149-250 10-113 (135)
145 PRK08324 short chain dehydroge 97.8 4.4E-05 9.5E-10 72.1 6.7 110 104-224 385-508 (681)
146 COG3967 DltE Short-chain dehyd 97.8 6.4E-05 1.4E-09 59.1 6.1 73 150-223 4-87 (245)
147 TIGR02853 spore_dpaA dipicolin 97.7 0.00013 2.8E-09 61.5 7.8 95 150-250 150-244 (287)
148 PRK11873 arsM arsenite S-adeno 97.7 0.00023 5E-09 59.6 8.7 101 145-249 72-186 (272)
149 PF11017 DUF2855: Protein of u 97.6 0.0013 2.9E-08 55.5 11.6 173 69-249 38-234 (314)
150 PF00670 AdoHcyase_NAD: S-aden 97.5 0.00062 1.3E-08 52.0 8.1 96 147-251 19-115 (162)
151 PLN03209 translocon at the inn 97.5 0.00042 9E-09 63.3 8.1 81 144-225 73-170 (576)
152 PF13602 ADH_zinc_N_2: Zinc-bi 97.5 6.8E-05 1.5E-09 55.0 2.3 50 195-247 1-52 (127)
153 TIGR01035 hemA glutamyl-tRNA r 97.5 0.00065 1.4E-08 60.4 8.9 153 63-229 89-255 (417)
154 PRK05786 fabG 3-ketoacyl-(acyl 97.4 0.0011 2.3E-08 54.0 9.2 74 150-224 4-91 (238)
155 PRK05993 short chain dehydroge 97.4 0.00091 2E-08 56.0 8.4 73 150-223 3-85 (277)
156 COG2518 Pcm Protein-L-isoaspar 97.4 0.0024 5.2E-08 50.7 10.1 100 141-245 63-168 (209)
157 PRK05693 short chain dehydroge 97.3 0.001 2.2E-08 55.5 8.1 72 152-224 2-82 (274)
158 TIGR00406 prmA ribosomal prote 97.3 0.0015 3.2E-08 55.2 8.4 98 148-249 157-262 (288)
159 PRK06139 short chain dehydroge 97.3 0.0014 3E-08 56.5 8.3 74 150-224 6-94 (330)
160 cd01065 NAD_bind_Shikimate_DH 97.3 0.0031 6.8E-08 47.8 9.4 84 141-226 8-93 (155)
161 PRK07060 short chain dehydroge 97.2 0.0017 3.8E-08 52.9 8.4 74 150-224 8-87 (245)
162 PRK05872 short chain dehydroge 97.2 0.0013 2.8E-08 55.7 7.6 74 150-224 8-95 (296)
163 PRK06182 short chain dehydroge 97.2 0.002 4.3E-08 53.7 8.5 74 150-224 2-84 (273)
164 PRK04148 hypothetical protein; 97.2 0.0018 4E-08 47.8 7.1 51 149-202 15-65 (134)
165 PF13460 NAD_binding_10: NADH( 97.2 0.0018 3.9E-08 50.5 7.4 92 154-249 1-100 (183)
166 cd01078 NAD_bind_H4MPT_DH NADP 97.2 0.0027 5.9E-08 50.3 8.4 76 150-226 27-109 (194)
167 PRK06057 short chain dehydroge 97.2 0.0024 5.1E-08 52.7 8.3 74 150-224 6-89 (255)
168 PRK07825 short chain dehydroge 97.1 0.0027 6E-08 52.9 8.7 74 150-224 4-88 (273)
169 PF12847 Methyltransf_18: Meth 97.1 0.0023 4.9E-08 45.6 6.9 92 150-244 1-109 (112)
170 PRK06200 2,3-dihydroxy-2,3-dih 97.1 0.0032 6.8E-08 52.2 8.6 74 150-224 5-90 (263)
171 PRK13943 protein-L-isoaspartat 97.1 0.0038 8.2E-08 53.5 9.1 99 142-244 72-178 (322)
172 PRK12809 putative oxidoreducta 97.1 0.0025 5.4E-08 59.9 8.7 75 150-226 309-407 (639)
173 PRK05866 short chain dehydroge 97.1 0.0035 7.6E-08 53.0 8.9 74 150-224 39-127 (293)
174 COG2910 Putative NADH-flavin r 97.1 0.0011 2.4E-08 51.3 5.1 95 153-250 2-108 (211)
175 PRK06949 short chain dehydroge 97.1 0.0032 6.8E-08 51.9 8.3 75 149-224 7-96 (258)
176 COG2230 Cfa Cyclopropane fatty 97.1 0.0055 1.2E-07 51.1 9.5 104 143-250 65-180 (283)
177 PRK12367 short chain dehydroge 97.1 0.0029 6.2E-08 52.1 7.9 73 150-224 13-89 (245)
178 PRK07814 short chain dehydroge 97.0 0.0038 8.3E-08 51.7 8.6 74 150-224 9-97 (263)
179 KOG1205 Predicted dehydrogenas 97.0 0.0035 7.6E-08 52.4 8.2 73 150-223 11-100 (282)
180 PRK06196 oxidoreductase; Provi 97.0 0.0038 8.2E-08 53.3 8.6 74 150-224 25-109 (315)
181 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0015 3.3E-08 51.1 5.4 67 149-223 34-100 (178)
182 PRK00258 aroE shikimate 5-dehy 97.0 0.0034 7.3E-08 52.8 7.9 73 149-224 121-195 (278)
183 PRK11705 cyclopropane fatty ac 97.0 0.0031 6.8E-08 55.4 7.9 105 138-246 154-267 (383)
184 PRK07831 short chain dehydroge 97.0 0.0045 9.8E-08 51.2 8.5 76 148-224 14-107 (262)
185 PRK12742 oxidoreductase; Provi 97.0 0.0047 1E-07 50.1 8.4 74 150-224 5-85 (237)
186 COG2242 CobL Precorrin-6B meth 97.0 0.0059 1.3E-07 47.6 8.3 98 144-244 28-133 (187)
187 TIGR03325 BphB_TodD cis-2,3-di 97.0 0.0043 9.3E-08 51.4 8.3 74 150-224 4-89 (262)
188 PRK06505 enoyl-(acyl carrier p 97.0 0.0044 9.6E-08 51.8 8.3 74 150-224 6-95 (271)
189 PRK00377 cbiT cobalt-precorrin 97.0 0.0038 8.3E-08 49.6 7.6 99 143-244 33-143 (198)
190 PRK08177 short chain dehydroge 97.0 0.0041 8.8E-08 50.3 7.9 72 152-224 2-81 (225)
191 PF02353 CMAS: Mycolic acid cy 97.0 0.00075 1.6E-08 56.5 3.6 100 142-245 54-165 (273)
192 CHL00194 ycf39 Ycf39; Provisio 96.9 0.003 6.6E-08 54.0 7.3 71 153-224 2-74 (317)
193 PRK03369 murD UDP-N-acetylmura 96.9 0.0042 9.2E-08 56.5 8.5 75 147-226 8-82 (488)
194 PRK07677 short chain dehydroge 96.9 0.0048 1E-07 50.8 8.2 73 151-224 1-88 (252)
195 PRK07904 short chain dehydroge 96.9 0.0056 1.2E-07 50.5 8.6 78 147-224 4-97 (253)
196 PRK05867 short chain dehydroge 96.9 0.0048 1E-07 50.8 8.1 74 150-224 8-96 (253)
197 TIGR01809 Shik-DH-AROM shikima 96.9 0.0035 7.7E-08 52.8 7.3 73 150-224 124-200 (282)
198 PRK08339 short chain dehydroge 96.9 0.0056 1.2E-07 50.9 8.4 74 150-224 7-95 (263)
199 TIGR02469 CbiT precorrin-6Y C5 96.9 0.013 2.8E-07 42.3 9.4 100 144-246 13-122 (124)
200 PRK13942 protein-L-isoaspartat 96.9 0.019 4.1E-07 46.2 10.9 101 142-245 68-175 (212)
201 PRK07062 short chain dehydroge 96.9 0.0056 1.2E-07 50.7 8.1 74 150-224 7-97 (265)
202 PRK06500 short chain dehydroge 96.9 0.0063 1.4E-07 49.7 8.4 74 150-224 5-90 (249)
203 PRK12829 short chain dehydroge 96.9 0.0049 1.1E-07 50.8 7.7 77 148-225 8-97 (264)
204 TIGR01318 gltD_gamma_fam gluta 96.8 0.0044 9.5E-08 56.1 7.8 76 149-226 139-238 (467)
205 PF06325 PrmA: Ribosomal prote 96.8 0.003 6.5E-08 53.3 6.3 148 82-251 108-264 (295)
206 PRK06180 short chain dehydroge 96.8 0.0071 1.5E-07 50.6 8.6 74 150-224 3-88 (277)
207 PRK06841 short chain dehydroge 96.8 0.0073 1.6E-07 49.6 8.5 74 150-224 14-99 (255)
208 KOG1014 17 beta-hydroxysteroid 96.8 0.0065 1.4E-07 50.9 7.9 103 149-253 47-193 (312)
209 PRK07533 enoyl-(acyl carrier p 96.8 0.0076 1.6E-07 49.9 8.5 74 150-224 9-98 (258)
210 PRK07109 short chain dehydroge 96.8 0.0076 1.6E-07 52.0 8.8 74 150-224 7-95 (334)
211 PRK05854 short chain dehydroge 96.8 0.0077 1.7E-07 51.5 8.7 42 150-192 13-54 (313)
212 PRK07478 short chain dehydroge 96.8 0.0082 1.8E-07 49.4 8.5 74 150-224 5-93 (254)
213 PRK09291 short chain dehydroge 96.8 0.0077 1.7E-07 49.5 8.3 73 151-224 2-83 (257)
214 PRK08217 fabG 3-ketoacyl-(acyl 96.8 0.008 1.7E-07 49.2 8.3 74 150-224 4-92 (253)
215 PRK13940 glutamyl-tRNA reducta 96.8 0.021 4.6E-07 50.7 11.3 97 149-250 179-277 (414)
216 PRK09072 short chain dehydroge 96.8 0.0077 1.7E-07 49.8 8.2 74 150-224 4-90 (263)
217 PF01135 PCMT: Protein-L-isoas 96.8 0.0084 1.8E-07 48.1 8.0 100 142-244 64-170 (209)
218 PRK08265 short chain dehydroge 96.8 0.0084 1.8E-07 49.6 8.4 74 150-224 5-90 (261)
219 PRK07231 fabG 3-ketoacyl-(acyl 96.8 0.0083 1.8E-07 49.0 8.3 74 150-224 4-91 (251)
220 COG0169 AroE Shikimate 5-dehyd 96.8 0.0065 1.4E-07 51.0 7.6 72 148-223 123-199 (283)
221 TIGR01832 kduD 2-deoxy-D-gluco 96.8 0.0088 1.9E-07 48.9 8.4 74 150-224 4-90 (248)
222 PRK07326 short chain dehydroge 96.8 0.0094 2E-07 48.3 8.5 74 150-224 5-92 (237)
223 PRK06194 hypothetical protein; 96.7 0.01 2.2E-07 49.7 8.8 74 150-224 5-93 (287)
224 PRK07576 short chain dehydroge 96.7 0.01 2.2E-07 49.2 8.7 75 149-224 7-96 (264)
225 PRK08415 enoyl-(acyl carrier p 96.7 0.01 2.2E-07 49.7 8.6 74 150-224 4-93 (274)
226 PRK08340 glucose-1-dehydrogena 96.7 0.011 2.3E-07 48.9 8.6 71 153-224 2-86 (259)
227 PRK12828 short chain dehydroge 96.7 0.0093 2E-07 48.3 8.1 74 150-224 6-92 (239)
228 PRK07063 short chain dehydroge 96.7 0.0096 2.1E-07 49.1 8.3 74 150-224 6-96 (260)
229 PRK12769 putative oxidoreducta 96.7 0.0074 1.6E-07 56.9 8.5 76 149-226 325-424 (654)
230 PRK07453 protochlorophyllide o 96.7 0.01 2.2E-07 50.8 8.7 73 150-223 5-92 (322)
231 PRK07454 short chain dehydroge 96.7 0.013 2.8E-07 47.7 9.0 75 149-224 4-93 (241)
232 PRK08862 short chain dehydroge 96.7 0.011 2.5E-07 48.0 8.5 73 150-223 4-92 (227)
233 PRK05876 short chain dehydroge 96.7 0.012 2.5E-07 49.3 8.7 74 150-224 5-93 (275)
234 PRK08618 ornithine cyclodeamin 96.7 0.027 5.8E-07 48.5 11.0 97 147-250 123-225 (325)
235 PRK06603 enoyl-(acyl carrier p 96.7 0.01 2.2E-07 49.2 8.3 74 150-224 7-96 (260)
236 PRK07424 bifunctional sterol d 96.7 0.0053 1.2E-07 54.3 6.7 74 150-224 177-255 (406)
237 PRK12550 shikimate 5-dehydroge 96.7 0.022 4.7E-07 47.7 10.0 75 141-223 112-187 (272)
238 PRK08628 short chain dehydroge 96.6 0.011 2.5E-07 48.6 8.4 74 150-224 6-93 (258)
239 PRK07523 gluconate 5-dehydroge 96.6 0.011 2.5E-07 48.5 8.4 74 150-224 9-97 (255)
240 PRK07774 short chain dehydroge 96.6 0.012 2.7E-07 48.1 8.5 74 150-224 5-93 (250)
241 PRK05717 oxidoreductase; Valid 96.6 0.012 2.6E-07 48.4 8.5 75 150-225 9-95 (255)
242 PRK07340 ornithine cyclodeamin 96.6 0.02 4.4E-07 48.7 10.0 95 148-250 122-221 (304)
243 PRK13944 protein-L-isoaspartat 96.6 0.022 4.7E-07 45.6 9.6 100 143-245 65-172 (205)
244 PRK06125 short chain dehydroge 96.6 0.014 2.9E-07 48.3 8.7 74 150-224 6-91 (259)
245 COG1748 LYS9 Saccharopine dehy 96.6 0.0045 9.7E-08 54.1 5.9 83 152-235 2-89 (389)
246 PRK08643 acetoin reductase; Va 96.6 0.012 2.6E-07 48.4 8.4 73 151-224 2-89 (256)
247 PRK07890 short chain dehydroge 96.6 0.012 2.5E-07 48.5 8.2 75 149-224 3-92 (258)
248 PRK07035 short chain dehydroge 96.6 0.013 2.8E-07 48.0 8.4 74 150-224 7-95 (252)
249 PRK06197 short chain dehydroge 96.6 0.012 2.7E-07 49.9 8.4 41 150-191 15-55 (306)
250 PRK08690 enoyl-(acyl carrier p 96.6 0.013 2.8E-07 48.6 8.3 74 150-224 5-94 (261)
251 PRK08261 fabG 3-ketoacyl-(acyl 96.6 0.0097 2.1E-07 53.5 8.1 74 150-224 209-294 (450)
252 PRK08589 short chain dehydroge 96.6 0.013 2.7E-07 48.9 8.2 73 150-224 5-92 (272)
253 KOG1201 Hydroxysteroid 17-beta 96.6 0.014 3E-07 48.8 8.1 73 149-223 36-123 (300)
254 PRK14027 quinate/shikimate deh 96.6 0.0098 2.1E-07 50.1 7.4 74 149-223 125-203 (283)
255 PRK12939 short chain dehydroge 96.6 0.016 3.4E-07 47.4 8.6 74 150-224 6-94 (250)
256 PRK07024 short chain dehydroge 96.5 0.017 3.6E-07 47.7 8.7 73 151-224 2-88 (257)
257 PRK12823 benD 1,6-dihydroxycyc 96.5 0.012 2.6E-07 48.5 7.8 74 150-224 7-94 (260)
258 PRK08277 D-mannonate oxidoredu 96.5 0.015 3.2E-07 48.5 8.5 74 150-224 9-97 (278)
259 PRK06079 enoyl-(acyl carrier p 96.5 0.015 3.2E-07 48.0 8.3 74 150-224 6-93 (252)
260 PRK06172 short chain dehydroge 96.5 0.016 3.4E-07 47.6 8.4 74 150-224 6-94 (253)
261 PRK08263 short chain dehydroge 96.5 0.017 3.8E-07 48.1 8.7 73 151-224 3-87 (275)
262 PRK12549 shikimate 5-dehydroge 96.5 0.011 2.5E-07 49.8 7.6 71 149-223 125-201 (284)
263 TIGR00507 aroE shikimate 5-deh 96.5 0.029 6.3E-07 46.9 10.0 71 148-224 114-188 (270)
264 PRK08017 oxidoreductase; Provi 96.5 0.0081 1.8E-07 49.3 6.6 72 152-224 3-84 (256)
265 PRK12384 sorbitol-6-phosphate 96.5 0.016 3.5E-07 47.8 8.4 41 151-192 2-42 (259)
266 PLN00141 Tic62-NAD(P)-related 96.5 0.011 2.3E-07 48.8 7.3 75 149-224 15-95 (251)
267 PRK08251 short chain dehydroge 96.5 0.018 3.9E-07 47.1 8.6 73 151-224 2-91 (248)
268 PLN02253 xanthoxin dehydrogena 96.5 0.015 3.3E-07 48.5 8.3 74 150-224 17-104 (280)
269 PRK08264 short chain dehydroge 96.5 0.014 3E-07 47.4 7.9 71 150-224 5-83 (238)
270 cd01075 NAD_bind_Leu_Phe_Val_D 96.5 0.018 4E-07 45.9 8.3 68 149-223 26-94 (200)
271 PRK06483 dihydromonapterin red 96.5 0.019 4.1E-07 46.6 8.6 73 151-224 2-84 (236)
272 PRK08267 short chain dehydroge 96.5 0.016 3.5E-07 47.8 8.3 73 152-225 2-88 (260)
273 PRK06138 short chain dehydroge 96.5 0.017 3.7E-07 47.2 8.4 74 150-224 4-91 (252)
274 PRK13394 3-hydroxybutyrate deh 96.5 0.02 4.3E-07 47.2 8.8 74 150-224 6-94 (262)
275 PRK06720 hypothetical protein; 96.5 0.027 5.8E-07 43.7 8.9 74 150-224 15-103 (169)
276 PRK06914 short chain dehydroge 96.5 0.016 3.4E-07 48.5 8.2 74 150-224 2-91 (280)
277 PRK07832 short chain dehydroge 96.5 0.015 3.3E-07 48.4 8.0 72 152-224 1-88 (272)
278 PRK14967 putative methyltransf 96.5 0.045 9.9E-07 44.3 10.6 76 143-222 29-109 (223)
279 PRK06181 short chain dehydroge 96.5 0.014 2.9E-07 48.3 7.7 73 151-224 1-88 (263)
280 KOG0725 Reductases with broad 96.5 0.011 2.3E-07 49.5 7.0 77 149-226 6-101 (270)
281 PRK08213 gluconate 5-dehydroge 96.5 0.017 3.6E-07 47.7 8.2 74 150-224 11-99 (259)
282 PRK08159 enoyl-(acyl carrier p 96.5 0.018 3.8E-07 48.2 8.4 75 149-224 8-98 (272)
283 PRK08085 gluconate 5-dehydroge 96.4 0.019 4.1E-07 47.2 8.4 74 150-224 8-96 (254)
284 PRK06482 short chain dehydroge 96.4 0.02 4.3E-07 47.8 8.6 72 152-224 3-86 (276)
285 PRK06198 short chain dehydroge 96.4 0.014 3.1E-07 48.0 7.7 75 149-224 4-94 (260)
286 PRK00107 gidB 16S rRNA methylt 96.4 0.019 4.2E-07 45.3 7.9 95 148-246 43-145 (187)
287 PRK05875 short chain dehydroge 96.4 0.013 2.9E-07 48.8 7.5 41 150-191 6-46 (276)
288 PRK12481 2-deoxy-D-gluconate 3 96.4 0.018 3.8E-07 47.5 8.1 74 150-224 7-93 (251)
289 cd01080 NAD_bind_m-THF_DH_Cycl 96.4 0.027 5.8E-07 43.6 8.5 54 131-186 23-78 (168)
290 PRK06484 short chain dehydroge 96.4 0.018 4E-07 52.6 8.9 74 150-224 268-353 (520)
291 PRK06179 short chain dehydroge 96.4 0.0095 2.1E-07 49.5 6.4 72 150-224 3-83 (270)
292 PRK09242 tropinone reductase; 96.4 0.023 4.9E-07 46.8 8.6 74 150-224 8-98 (257)
293 PRK06114 short chain dehydroge 96.4 0.023 5E-07 46.8 8.5 74 150-224 7-96 (254)
294 TIGR03206 benzo_BadH 2-hydroxy 96.4 0.023 5E-07 46.4 8.5 74 150-224 2-90 (250)
295 PF00106 adh_short: short chai 96.4 0.012 2.5E-07 45.0 6.3 75 152-226 1-92 (167)
296 COG2264 PrmA Ribosomal protein 96.3 0.026 5.7E-07 47.5 8.6 148 82-250 109-267 (300)
297 PRK06484 short chain dehydroge 96.3 0.017 3.7E-07 52.9 8.2 74 150-224 4-89 (520)
298 PRK07067 sorbitol dehydrogenas 96.3 0.026 5.6E-07 46.5 8.6 74 150-224 5-90 (257)
299 PRK06953 short chain dehydroge 96.3 0.022 4.7E-07 45.9 8.0 73 152-225 2-81 (222)
300 PRK05884 short chain dehydroge 96.3 0.02 4.4E-07 46.2 7.8 70 153-223 2-78 (223)
301 TIGR02632 RhaD_aldol-ADH rhamn 96.3 0.023 4.9E-07 53.9 9.1 74 150-224 413-503 (676)
302 PRK08226 short chain dehydroge 96.3 0.027 5.8E-07 46.5 8.6 74 150-224 5-92 (263)
303 COG2227 UbiG 2-polyprenyl-3-me 96.3 0.0066 1.4E-07 49.1 4.6 92 149-245 58-160 (243)
304 PRK07856 short chain dehydroge 96.3 0.021 4.6E-07 46.9 7.9 38 150-188 5-42 (252)
305 PRK14982 acyl-ACP reductase; P 96.3 0.02 4.4E-07 49.3 7.8 96 149-250 153-250 (340)
306 PRK10538 malonic semialdehyde 96.3 0.028 6.1E-07 46.0 8.6 72 152-224 1-84 (248)
307 PRK08303 short chain dehydroge 96.3 0.024 5.2E-07 48.3 8.3 35 150-185 7-41 (305)
308 PF03435 Saccharop_dh: Sacchar 96.3 0.0041 8.8E-08 54.8 3.6 89 154-244 1-96 (386)
309 PRK07074 short chain dehydroge 96.3 0.029 6.3E-07 46.1 8.5 73 151-224 2-87 (257)
310 TIGR01777 yfcH conserved hypot 96.3 0.0048 1E-07 51.7 3.9 67 154-224 1-67 (292)
311 PRK12429 3-hydroxybutyrate deh 96.3 0.03 6.4E-07 45.9 8.6 74 150-224 3-91 (258)
312 PF13241 NAD_binding_7: Putati 96.2 0.0051 1.1E-07 43.5 3.3 87 150-247 6-92 (103)
313 PRK05653 fabG 3-ketoacyl-(acyl 96.2 0.03 6.6E-07 45.4 8.4 74 150-224 4-92 (246)
314 PRK06113 7-alpha-hydroxysteroi 96.2 0.032 7E-07 45.9 8.5 74 150-224 10-98 (255)
315 PRK07984 enoyl-(acyl carrier p 96.2 0.033 7.1E-07 46.3 8.5 36 150-186 5-42 (262)
316 PRK06398 aldose dehydrogenase; 96.2 0.017 3.8E-07 47.7 6.9 69 150-224 5-82 (258)
317 PRK06463 fabG 3-ketoacyl-(acyl 96.2 0.036 7.8E-07 45.6 8.7 74 150-224 6-89 (255)
318 PRK07791 short chain dehydroge 96.2 0.038 8.3E-07 46.5 9.0 37 149-186 4-40 (286)
319 PRK07666 fabG 3-ketoacyl-(acyl 96.2 0.035 7.7E-07 45.1 8.6 74 150-224 6-94 (239)
320 PRK06124 gluconate 5-dehydroge 96.2 0.039 8.5E-07 45.3 8.9 74 150-224 10-98 (256)
321 PRK12548 shikimate 5-dehydroge 96.2 0.023 4.9E-07 48.1 7.5 73 149-223 124-208 (289)
322 PF05368 NmrA: NmrA-like famil 96.2 0.02 4.3E-07 46.5 7.0 70 154-225 1-75 (233)
323 PRK08993 2-deoxy-D-gluconate 3 96.2 0.032 7E-07 45.9 8.3 74 150-224 9-95 (253)
324 PRK08219 short chain dehydroge 96.2 0.037 8.1E-07 44.4 8.5 72 151-224 3-81 (227)
325 PRK06101 short chain dehydroge 96.1 0.033 7.2E-07 45.4 8.2 43 152-195 2-44 (240)
326 PRK07775 short chain dehydroge 96.1 0.036 7.8E-07 46.2 8.5 74 150-224 9-97 (274)
327 PRK08317 hypothetical protein; 96.1 0.035 7.6E-07 45.0 8.3 101 143-246 12-124 (241)
328 PRK14175 bifunctional 5,10-met 96.1 0.039 8.5E-07 46.3 8.5 95 131-248 137-232 (286)
329 PRK06935 2-deoxy-D-gluconate 3 96.1 0.036 7.9E-07 45.7 8.5 73 150-224 14-101 (258)
330 TIGR00080 pimt protein-L-isoas 96.1 0.08 1.7E-06 42.6 10.2 101 142-245 69-176 (215)
331 PRK06141 ornithine cyclodeamin 96.1 0.099 2.1E-06 44.8 11.2 95 148-248 122-221 (314)
332 PRK12826 3-ketoacyl-(acyl-carr 96.1 0.037 8.1E-07 45.1 8.4 74 150-224 5-93 (251)
333 PRK05650 short chain dehydroge 96.1 0.04 8.7E-07 45.8 8.6 72 152-224 1-87 (270)
334 PRK12936 3-ketoacyl-(acyl-carr 96.1 0.043 9.2E-07 44.6 8.6 74 150-224 5-90 (245)
335 PLN02780 ketoreductase/ oxidor 96.1 0.017 3.7E-07 49.6 6.4 42 150-192 52-93 (320)
336 PLN02986 cinnamyl-alcohol dehy 96.1 0.022 4.7E-07 48.7 7.1 74 150-224 4-87 (322)
337 cd05311 NAD_bind_2_malic_enz N 96.0 0.075 1.6E-06 43.2 9.7 77 141-223 14-106 (226)
338 PRK07806 short chain dehydroge 96.0 0.039 8.4E-07 45.1 8.1 36 150-186 5-40 (248)
339 PLN02657 3,8-divinyl protochlo 96.0 0.024 5.3E-07 50.0 7.3 78 146-224 55-146 (390)
340 PRK07097 gluconate 5-dehydroge 96.0 0.047 1E-06 45.2 8.6 74 150-224 9-97 (265)
341 KOG1209 1-Acyl dihydroxyaceton 96.0 0.035 7.5E-07 44.3 7.1 75 150-225 6-92 (289)
342 PRK06523 short chain dehydroge 96.0 0.032 6.9E-07 46.0 7.5 71 150-224 8-87 (260)
343 TIGR01289 LPOR light-dependent 96.0 0.044 9.4E-07 46.8 8.5 73 151-224 3-91 (314)
344 PRK07102 short chain dehydroge 96.0 0.04 8.6E-07 44.9 7.9 40 152-192 2-41 (243)
345 PLN02989 cinnamyl-alcohol dehy 96.0 0.034 7.3E-07 47.6 7.7 74 150-224 4-87 (325)
346 TIGR03840 TMPT_Se_Te thiopurin 95.9 0.038 8.3E-07 44.5 7.5 96 149-249 33-155 (213)
347 PLN02427 UDP-apiose/xylose syn 95.9 0.034 7.4E-07 48.9 7.9 76 148-223 11-95 (386)
348 PRK06128 oxidoreductase; Provi 95.9 0.046 1E-06 46.3 8.4 74 150-224 54-144 (300)
349 PRK12743 oxidoreductase; Provi 95.9 0.05 1.1E-06 44.8 8.4 73 151-224 2-90 (256)
350 PF13823 ADH_N_assoc: Alcohol 95.9 0.005 1.1E-07 30.7 1.4 22 1-27 1-22 (23)
351 PRK08594 enoyl-(acyl carrier p 95.9 0.043 9.4E-07 45.4 8.0 74 150-224 6-97 (257)
352 PRK14192 bifunctional 5,10-met 95.9 0.06 1.3E-06 45.3 8.8 36 148-184 156-191 (283)
353 PRK06997 enoyl-(acyl carrier p 95.9 0.046 1E-06 45.3 8.1 74 150-224 5-94 (260)
354 PLN00203 glutamyl-tRNA reducta 95.9 0.031 6.8E-07 51.0 7.4 73 151-227 266-342 (519)
355 PRK12749 quinate/shikimate deh 95.9 0.079 1.7E-06 44.8 9.3 73 150-223 123-205 (288)
356 smart00846 Gp_dh_N Glyceraldeh 95.8 0.065 1.4E-06 40.6 8.0 97 153-251 2-123 (149)
357 PRK01438 murD UDP-N-acetylmura 95.8 0.057 1.2E-06 49.0 9.1 71 149-225 14-89 (480)
358 PRK08063 enoyl-(acyl carrier p 95.8 0.053 1.2E-06 44.3 8.1 74 150-224 3-92 (250)
359 PRK05599 hypothetical protein; 95.8 0.055 1.2E-06 44.4 8.2 71 152-224 1-87 (246)
360 PRK08278 short chain dehydroge 95.8 0.053 1.1E-06 45.2 8.2 37 150-187 5-41 (273)
361 KOG1199 Short-chain alcohol de 95.8 0.047 1E-06 42.0 6.9 80 149-229 7-98 (260)
362 PF01262 AlaDh_PNT_C: Alanine 95.8 0.031 6.7E-07 43.2 6.2 48 151-200 20-67 (168)
363 PRK05855 short chain dehydroge 95.8 0.048 1E-06 50.3 8.6 74 150-224 314-402 (582)
364 COG0686 Ald Alanine dehydrogen 95.8 0.016 3.4E-07 48.8 4.6 70 149-221 167-238 (371)
365 PLN02896 cinnamyl-alcohol dehy 95.7 0.057 1.2E-06 46.9 8.3 75 149-224 8-89 (353)
366 PRK12938 acetyacetyl-CoA reduc 95.7 0.043 9.3E-07 44.7 7.2 75 150-225 2-92 (246)
367 PRK05565 fabG 3-ketoacyl-(acyl 95.7 0.044 9.6E-07 44.5 7.2 74 151-225 5-94 (247)
368 COG2519 GCD14 tRNA(1-methylade 95.7 0.067 1.4E-06 43.8 7.8 101 143-246 87-195 (256)
369 PRK11908 NAD-dependent epimera 95.7 0.033 7.2E-07 48.1 6.7 72 152-223 2-77 (347)
370 PRK10258 biotin biosynthesis p 95.7 0.056 1.2E-06 44.6 7.7 101 145-250 37-144 (251)
371 PRK06171 sorbitol-6-phosphate 95.7 0.044 9.5E-07 45.4 7.1 71 150-224 8-87 (266)
372 PRK08416 7-alpha-hydroxysteroi 95.7 0.081 1.8E-06 43.7 8.6 73 150-223 7-96 (260)
373 PRK07370 enoyl-(acyl carrier p 95.6 0.061 1.3E-06 44.5 7.8 35 150-185 5-41 (258)
374 PRK08703 short chain dehydroge 95.6 0.035 7.5E-07 45.2 6.3 42 150-192 5-46 (239)
375 TIGR03589 PseB UDP-N-acetylglu 95.6 0.059 1.3E-06 46.2 8.0 75 150-224 3-84 (324)
376 TIGR03466 HpnA hopanoid-associ 95.6 0.015 3.3E-07 49.5 4.3 71 153-224 2-74 (328)
377 PRK13656 trans-2-enoyl-CoA red 95.6 0.087 1.9E-06 46.1 8.8 75 149-225 39-142 (398)
378 PLN02686 cinnamoyl-CoA reducta 95.6 0.033 7.2E-07 48.7 6.5 46 148-194 50-95 (367)
379 COG2226 UbiE Methylase involve 95.6 0.072 1.6E-06 43.6 7.8 107 144-253 45-163 (238)
380 PLN02662 cinnamyl-alcohol dehy 95.6 0.047 1E-06 46.5 7.1 73 150-223 3-85 (322)
381 PRK08125 bifunctional UDP-gluc 95.6 0.041 8.8E-07 52.1 7.3 76 148-223 312-391 (660)
382 PRK12937 short chain dehydroge 95.5 0.089 1.9E-06 42.7 8.4 74 150-224 4-93 (245)
383 PRK07502 cyclohexadienyl dehyd 95.5 0.055 1.2E-06 46.1 7.3 70 152-226 7-78 (307)
384 PRK15181 Vi polysaccharide bio 95.5 0.045 9.7E-07 47.5 6.9 49 138-187 2-50 (348)
385 TIGR02356 adenyl_thiF thiazole 95.5 0.038 8.3E-07 44.1 6.0 34 150-185 20-54 (202)
386 TIGR02415 23BDH acetoin reduct 95.5 0.093 2E-06 42.9 8.5 72 152-224 1-87 (254)
387 PRK07792 fabG 3-ketoacyl-(acyl 95.5 0.074 1.6E-06 45.2 8.1 74 150-224 11-99 (306)
388 TIGR02992 ectoine_eutC ectoine 95.5 0.25 5.5E-06 42.5 11.3 94 149-248 127-226 (326)
389 PRK07889 enoyl-(acyl carrier p 95.5 0.089 1.9E-06 43.4 8.3 74 150-224 6-95 (256)
390 PRK10792 bifunctional 5,10-met 95.5 0.11 2.3E-06 43.6 8.6 94 131-247 138-232 (285)
391 PRK14189 bifunctional 5,10-met 95.5 0.11 2.3E-06 43.7 8.5 96 131-249 137-233 (285)
392 PRK09186 flagellin modificatio 95.5 0.042 9.2E-07 45.0 6.3 42 150-192 3-44 (256)
393 PRK08945 putative oxoacyl-(acy 95.4 0.047 1E-06 44.6 6.4 44 147-191 8-51 (247)
394 PF01113 DapB_N: Dihydrodipico 95.4 0.0051 1.1E-07 45.1 0.6 95 153-249 2-100 (124)
395 COG1090 Predicted nucleoside-d 95.4 0.034 7.4E-07 46.0 5.3 70 154-229 1-71 (297)
396 PRK07201 short chain dehydroge 95.4 0.074 1.6E-06 50.1 8.5 73 151-224 371-458 (657)
397 PRK06701 short chain dehydroge 95.4 0.097 2.1E-06 44.1 8.4 37 149-186 44-80 (290)
398 PRK09135 pteridine reductase; 95.4 0.12 2.5E-06 42.1 8.7 36 150-186 5-40 (249)
399 PRK12746 short chain dehydroge 95.4 0.075 1.6E-06 43.5 7.5 40 150-190 5-45 (254)
400 PLN02214 cinnamoyl-CoA reducta 95.4 0.061 1.3E-06 46.5 7.2 75 149-224 8-91 (342)
401 COG0031 CysK Cysteine synthase 95.4 0.16 3.5E-06 42.9 9.2 61 142-204 53-116 (300)
402 KOG1502 Flavonol reductase/cin 95.3 0.07 1.5E-06 45.5 7.1 73 150-223 5-87 (327)
403 PRK05557 fabG 3-ketoacyl-(acyl 95.3 0.12 2.7E-06 41.8 8.5 37 150-187 4-40 (248)
404 PRK09134 short chain dehydroge 95.3 0.13 2.8E-06 42.3 8.7 74 150-224 8-97 (258)
405 TIGR01470 cysG_Nterm siroheme 95.3 0.082 1.8E-06 42.3 7.1 72 150-225 8-80 (205)
406 PRK00312 pcm protein-L-isoaspa 95.3 0.26 5.7E-06 39.5 10.2 98 143-245 71-174 (212)
407 PRK14176 bifunctional 5,10-met 95.3 0.15 3.3E-06 42.8 8.9 94 131-247 143-237 (287)
408 PF03446 NAD_binding_2: NAD bi 95.3 0.038 8.3E-07 42.4 5.0 68 152-226 2-69 (163)
409 PRK07574 formate dehydrogenase 95.3 0.057 1.2E-06 47.5 6.6 67 150-223 191-257 (385)
410 PRK08261 fabG 3-ketoacyl-(acyl 95.2 0.0087 1.9E-07 53.8 1.5 43 144-187 27-73 (450)
411 PRK07577 short chain dehydroge 95.2 0.062 1.3E-06 43.4 6.4 69 150-224 2-78 (234)
412 PF08704 GCD14: tRNA methyltra 95.2 0.059 1.3E-06 44.4 6.1 101 143-246 33-146 (247)
413 PRK14191 bifunctional 5,10-met 95.2 0.12 2.6E-06 43.4 8.0 94 131-247 136-230 (285)
414 PRK08936 glucose-1-dehydrogena 95.2 0.13 2.9E-06 42.4 8.4 74 150-224 6-95 (261)
415 PLN03139 formate dehydrogenase 95.2 0.049 1.1E-06 47.9 6.0 67 150-223 198-264 (386)
416 PF01118 Semialdhyde_dh: Semia 95.2 0.018 3.9E-07 41.9 2.8 80 153-235 1-87 (121)
417 TIGR01829 AcAcCoA_reduct aceto 95.2 0.15 3.2E-06 41.3 8.5 72 152-224 1-88 (242)
418 KOG1252 Cystathionine beta-syn 95.1 0.13 2.8E-06 43.8 8.0 64 139-203 87-157 (362)
419 TIGR00438 rrmJ cell division p 95.1 0.063 1.4E-06 42.2 6.0 96 146-248 28-148 (188)
420 KOG4169 15-hydroxyprostaglandi 95.1 0.055 1.2E-06 43.6 5.5 44 151-195 5-48 (261)
421 PLN02695 GDP-D-mannose-3',5'-e 95.1 0.044 9.5E-07 48.0 5.6 75 148-223 18-94 (370)
422 PLN02928 oxidoreductase family 95.1 0.06 1.3E-06 46.8 6.3 35 150-186 158-192 (347)
423 PLN00198 anthocyanidin reducta 95.1 0.093 2E-06 45.1 7.5 73 150-223 8-89 (338)
424 TIGR01963 PHB_DH 3-hydroxybuty 95.1 0.056 1.2E-06 44.2 5.9 73 151-224 1-88 (255)
425 TIGR02622 CDP_4_6_dhtase CDP-g 95.1 0.055 1.2E-06 46.9 6.0 74 150-224 3-85 (349)
426 cd05212 NAD_bind_m-THF_DH_Cycl 95.1 0.21 4.6E-06 37.4 8.3 54 132-186 8-62 (140)
427 PRK07023 short chain dehydroge 95.1 0.065 1.4E-06 43.7 6.1 36 152-188 2-37 (243)
428 PRK08220 2,3-dihydroxybenzoate 95.1 0.12 2.7E-06 42.2 7.8 36 150-186 7-42 (252)
429 PRK09310 aroDE bifunctional 3- 95.0 0.19 4E-06 45.7 9.5 70 150-225 331-401 (477)
430 cd05211 NAD_bind_Glu_Leu_Phe_V 95.0 0.17 3.7E-06 40.9 8.3 74 149-226 21-109 (217)
431 PRK07985 oxidoreductase; Provi 95.0 0.13 2.8E-06 43.5 8.1 74 150-224 48-138 (294)
432 PRK12745 3-ketoacyl-(acyl-carr 95.0 0.16 3.4E-06 41.6 8.4 34 152-186 3-36 (256)
433 TIGR01546 GAPDH-II_archae glyc 95.0 0.14 3E-06 44.1 8.0 97 154-252 1-112 (333)
434 PF00044 Gp_dh_N: Glyceraldehy 95.0 0.035 7.7E-07 42.1 3.9 97 153-251 2-124 (151)
435 PRK01683 trans-aconitate 2-met 95.0 0.16 3.4E-06 42.0 8.2 99 143-245 24-129 (258)
436 PRK12475 thiamine/molybdopteri 94.9 0.049 1.1E-06 47.1 5.3 77 151-229 24-131 (338)
437 PRK13403 ketol-acid reductoiso 94.9 0.076 1.6E-06 45.3 6.1 72 148-227 13-84 (335)
438 PRK07069 short chain dehydroge 94.9 0.12 2.5E-06 42.2 7.2 38 154-192 2-40 (251)
439 COG0373 HemA Glutamyl-tRNA red 94.9 0.11 2.3E-06 45.9 7.2 97 149-250 176-278 (414)
440 PF02882 THF_DHG_CYH_C: Tetrah 94.9 0.29 6.3E-06 37.5 8.8 59 130-189 14-73 (160)
441 PLN02650 dihydroflavonol-4-red 94.9 0.089 1.9E-06 45.6 6.8 73 150-223 4-86 (351)
442 PRK13243 glyoxylate reductase; 94.9 0.09 2E-06 45.4 6.7 66 150-224 149-214 (333)
443 PRK12814 putative NADPH-depend 94.9 0.11 2.4E-06 49.1 7.8 75 149-225 191-289 (652)
444 PRK12744 short chain dehydroge 94.9 0.19 4.1E-06 41.3 8.4 34 150-184 7-40 (257)
445 TIGR02685 pter_reduc_Leis pter 94.9 0.19 4.1E-06 41.6 8.5 38 152-190 2-40 (267)
446 PRK12825 fabG 3-ketoacyl-(acyl 94.8 0.21 4.5E-06 40.4 8.6 37 150-187 5-41 (249)
447 PRK07041 short chain dehydroge 94.8 0.14 2.9E-06 41.3 7.4 69 155-224 1-79 (230)
448 PRK14106 murD UDP-N-acetylmura 94.8 0.15 3.2E-06 45.9 8.2 71 150-225 4-79 (450)
449 PLN02520 bifunctional 3-dehydr 94.8 0.1 2.2E-06 48.0 7.2 70 150-223 378-448 (529)
450 PLN02166 dTDP-glucose 4,6-dehy 94.8 0.14 3E-06 45.9 7.9 72 149-223 118-193 (436)
451 PRK08642 fabG 3-ketoacyl-(acyl 94.8 0.2 4.3E-06 40.9 8.4 74 150-224 4-91 (253)
452 PRK09730 putative NAD(P)-bindi 94.8 0.16 3.6E-06 41.2 7.8 72 152-224 2-89 (247)
453 PF02254 TrkA_N: TrkA-N domain 94.8 0.21 4.5E-06 35.7 7.5 75 154-231 1-79 (116)
454 PLN02206 UDP-glucuronate decar 94.8 0.11 2.4E-06 46.7 7.2 71 149-223 117-192 (442)
455 COG0702 Predicted nucleoside-d 94.8 0.083 1.8E-06 43.7 6.1 71 152-224 1-73 (275)
456 PRK15469 ghrA bifunctional gly 94.8 0.072 1.6E-06 45.6 5.7 66 150-224 135-200 (312)
457 COG0057 GapA Glyceraldehyde-3- 94.7 0.17 3.6E-06 43.1 7.7 101 153-254 3-130 (335)
458 PRK14194 bifunctional 5,10-met 94.7 0.2 4.3E-06 42.4 8.1 55 131-186 138-193 (301)
459 PRK06947 glucose-1-dehydrogena 94.7 0.2 4.3E-06 40.9 8.1 72 152-224 3-90 (248)
460 PRK12935 acetoacetyl-CoA reduc 94.7 0.23 5.1E-06 40.4 8.5 74 150-224 5-94 (247)
461 PRK06077 fabG 3-ketoacyl-(acyl 94.7 0.22 4.7E-06 40.6 8.4 74 150-224 5-94 (252)
462 PRK04207 glyceraldehyde-3-phos 94.7 0.16 3.6E-06 43.9 7.8 93 153-248 3-110 (341)
463 KOG1208 Dehydrogenases with di 94.7 0.093 2E-06 44.9 6.2 43 149-192 33-75 (314)
464 PRK09260 3-hydroxybutyryl-CoA 94.7 0.042 9E-07 46.4 4.0 40 152-193 2-41 (288)
465 PRK13255 thiopurine S-methyltr 94.6 0.25 5.4E-06 40.0 8.3 42 147-192 34-75 (218)
466 PRK00216 ubiE ubiquinone/menaq 94.6 0.39 8.6E-06 38.8 9.7 103 144-249 45-161 (239)
467 PLN03075 nicotianamine synthas 94.6 0.12 2.6E-06 43.7 6.5 95 149-245 122-232 (296)
468 PRK13984 putative oxidoreducta 94.6 0.13 2.8E-06 48.2 7.5 76 148-225 280-379 (604)
469 PRK07417 arogenate dehydrogena 94.6 0.16 3.6E-06 42.6 7.5 68 153-226 2-69 (279)
470 TIGR00563 rsmB ribosomal RNA s 94.6 0.42 9.1E-06 42.8 10.4 78 144-223 232-321 (426)
471 PRK08287 cobalt-precorrin-6Y C 94.6 0.31 6.7E-06 38.2 8.6 98 144-246 25-131 (187)
472 KOG1210 Predicted 3-ketosphing 94.5 0.15 3.2E-06 43.1 6.9 49 147-196 29-78 (331)
473 PRK14103 trans-aconitate 2-met 94.5 0.32 7E-06 40.2 9.1 98 143-245 22-125 (255)
474 PRK14188 bifunctional 5,10-met 94.5 0.26 5.6E-06 41.7 8.3 94 131-248 137-232 (296)
475 PRK08291 ectoine utilization p 94.5 0.74 1.6E-05 39.7 11.4 94 149-248 130-229 (330)
476 TIGR02355 moeB molybdopterin s 94.5 0.059 1.3E-06 44.2 4.4 77 151-228 24-128 (240)
477 PLN02653 GDP-mannose 4,6-dehyd 94.5 0.092 2E-06 45.2 5.9 37 150-187 5-41 (340)
478 PRK06940 short chain dehydroge 94.4 0.23 5.1E-06 41.4 8.1 71 151-224 2-86 (275)
479 PRK08762 molybdopterin biosynt 94.4 0.071 1.5E-06 46.8 5.1 35 150-185 134-168 (376)
480 PRK12748 3-ketoacyl-(acyl-carr 94.4 0.26 5.6E-06 40.5 8.3 35 150-185 4-40 (256)
481 PLN02244 tocopherol O-methyltr 94.4 0.45 9.7E-06 41.2 10.0 96 149-248 117-225 (340)
482 PRK06123 short chain dehydroge 94.4 0.25 5.4E-06 40.2 8.1 73 151-224 2-90 (248)
483 PRK06550 fabG 3-ketoacyl-(acyl 94.4 0.13 2.7E-06 41.7 6.2 71 150-224 4-77 (235)
484 PF03807 F420_oxidored: NADP o 94.4 0.061 1.3E-06 37.1 3.8 76 153-234 1-81 (96)
485 PRK12824 acetoacetyl-CoA reduc 94.4 0.28 6E-06 39.8 8.3 34 152-186 3-36 (245)
486 COG1052 LdhA Lactate dehydroge 94.4 0.1 2.2E-06 44.8 5.7 65 150-223 145-209 (324)
487 PRK04457 spermidine synthase; 94.4 0.24 5.2E-06 41.2 7.9 93 149-244 65-175 (262)
488 PRK02472 murD UDP-N-acetylmura 94.3 0.22 4.7E-06 44.7 8.2 72 150-225 4-79 (447)
489 PRK07066 3-hydroxybutyryl-CoA 94.3 0.13 2.8E-06 44.2 6.3 38 152-191 8-45 (321)
490 TIGR03215 ac_ald_DH_ac acetald 94.3 0.11 2.4E-06 43.7 5.8 86 153-244 3-92 (285)
491 KOG1200 Mitochondrial/plastidi 94.3 0.25 5.5E-06 39.0 7.2 72 151-223 14-99 (256)
492 PRK06823 ornithine cyclodeamin 94.3 1 2.2E-05 38.6 11.6 97 148-250 125-226 (315)
493 TIGR00477 tehB tellurite resis 94.2 0.2 4.4E-06 39.7 6.9 98 146-248 26-135 (195)
494 PRK11207 tellurite resistance 94.2 0.36 7.7E-06 38.3 8.3 98 145-248 25-136 (197)
495 PRK12827 short chain dehydroge 94.2 0.3 6.5E-06 39.6 8.2 34 150-184 5-38 (249)
496 TIGR02371 ala_DH_arch alanine 94.2 0.91 2E-05 39.1 11.3 96 148-249 125-225 (325)
497 PRK07402 precorrin-6B methylas 94.2 0.35 7.6E-06 38.2 8.3 101 144-247 34-143 (196)
498 TIGR00715 precor6x_red precorr 94.2 0.11 2.3E-06 43.2 5.3 71 152-224 1-75 (256)
499 COG0569 TrkA K+ transport syst 94.2 0.29 6.2E-06 39.8 7.7 74 152-228 1-80 (225)
500 PRK07819 3-hydroxybutyryl-CoA 94.2 0.18 4E-06 42.5 6.8 38 152-191 6-43 (286)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=4.3e-52 Score=347.94 Aligned_cols=243 Identities=35% Similarity=0.497 Sum_probs=217.0
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++.+++++ ++++ |++.|+|+++||+|+++|+|+|++|++.++|.++. ..+|.++|||.+|+|+++|++|+
T Consensus 4 mkA~~~~~~~~p---l~i~-e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~--~~~P~ipGHEivG~V~~vG~~V~ 77 (339)
T COG1064 4 MKAAVLKKFGQP---LEIE-EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV--PKLPLIPGHEIVGTVVEVGEGVT 77 (339)
T ss_pred eEEEEEccCCCC---ceEE-eccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC--CCCCccCCcceEEEEEEecCCCc
Confidence 899999999987 6888 89999999999999999999999999999999864 44999999999999999999999
Q ss_pred CCCCCCEEEe-ccC------------------ccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHH
Q 025278 81 KFKVGDEVYG-DIN------------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (255)
Q Consensus 81 ~~~~Gd~V~~-~~~------------------~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 141 (255)
+|++||||.. ... +....+...+|+|+||+++|+.+++++|+++++++||.+.|+..|.|+
T Consensus 78 ~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~ 157 (339)
T COG1064 78 GLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYR 157 (339)
T ss_pred cCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEee
Confidence 9999999976 211 111233457899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc-CCCccEEEE
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-PEKFDVVFD 220 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-~~~~d~vid 220 (255)
+++..+++||++|+|+| .|++|.+++|+|+++ |++|++++++++|++.++++|++++++..+++..+. .+.+|++||
T Consensus 158 alk~~~~~pG~~V~I~G-~GGlGh~avQ~Aka~-ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~ 235 (339)
T COG1064 158 ALKKANVKPGKWVAVVG-AGGLGHMAVQYAKAM-GAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIID 235 (339)
T ss_pred ehhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEE
Confidence 99999999999999999 789999999999997 799999999999999999999999999775544332 334999999
Q ss_pred CCCCccceeeeeeccccCCceEEEEeecc-CCCC
Q 025278 221 AVGKMCISIVYQKCDKFQEKSLINFGLFR-QEVP 253 (255)
Q Consensus 221 ~~G~~~~~~~~~~~~~~~~G~~v~~G~~~-~~~~ 253 (255)
+++ ......++.+++ ++|+++++|... ++.+
T Consensus 236 tv~-~~~~~~~l~~l~-~~G~~v~vG~~~~~~~~ 267 (339)
T COG1064 236 TVG-PATLEPSLKALR-RGGTLVLVGLPGGGPIP 267 (339)
T ss_pred CCC-hhhHHHHHHHHh-cCCEEEEECCCCCcccC
Confidence 999 888888999998 899999999995 5433
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=5.6e-46 Score=316.98 Aligned_cols=238 Identities=43% Similarity=0.594 Sum_probs=212.1
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++..++.+ ..++++ |.|.|+|+++||+||+.+++||+.|....+|.. ....++|.++|.|++|+|+++|++++
T Consensus 1 mka~~~~~~g~~-~~l~~~-e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~-~~~~~~P~i~G~d~aG~V~avG~~V~ 77 (326)
T COG0604 1 MKAVVVEEFGGP-EVLKVV-EVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA-PPVRPLPFIPGSEAAGVVVAVGSGVT 77 (326)
T ss_pred CeEEEEeccCCC-ceeEEE-ecCCCCCCCCeEEEEEEEeecChHHHHhccCCC-CCCCCCCCcccceeEEEEEEeCCCCC
Confidence 999999999998 448999 899999999999999999999999999999872 23456899999999999999999999
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga 159 (255)
.+++||||+.... . ...|+|+||..+|++.++++|+++++++||.++++++|||+++. ..++++|++|||+||
T Consensus 78 ~~~~GdrV~~~~~----~--~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~ga 151 (326)
T COG0604 78 GFKVGDRVAALGG----V--GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGA 151 (326)
T ss_pred CcCCCCEEEEccC----C--CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 9999999999740 0 04799999999999999999999999999999999999999995 588999999999999
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc------CCCccEEEECCCCccceeeeee
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGKMCISIVYQK 233 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~~~~d~vid~~G~~~~~~~~~~ 233 (255)
+|++|.+++|+|+++ |+++++++.+++|.++++++|++++++|.++++.+. .+++|+|||++|+..... ++.
T Consensus 152 aGgVG~~aiQlAk~~-G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~-~l~ 229 (326)
T COG0604 152 AGGVGSAAIQLAKAL-GATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAA-SLA 229 (326)
T ss_pred CchHHHHHHHHHHHc-CCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHH-HHH
Confidence 999999999999996 768888888888888999999999999988876653 237999999999887655 566
Q ss_pred ccccCCceEEEEeeccC
Q 025278 234 CDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 234 ~~~~~~G~~v~~G~~~~ 250 (255)
.++ ++|+++.+|..++
T Consensus 230 ~l~-~~G~lv~ig~~~g 245 (326)
T COG0604 230 ALA-PGGRLVSIGALSG 245 (326)
T ss_pred Hhc-cCCEEEEEecCCC
Confidence 666 6799999999884
No 3
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.1e-44 Score=291.17 Aligned_cols=241 Identities=25% Similarity=0.367 Sum_probs=205.1
Q ss_pred CeEEEEcccCCCccceEEeecccCCCC-CCCeEEEEEeEeecChHhHHHHcCCCC-CCCCCCCcccccceEEEEEEeCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQ 78 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~-~~~eV~V~v~~~~i~~~D~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~~G~~ 78 (255)
|+|+++.++++. +++ +.|.|++ .|+||+|++.++|||++|+|+|..... ....+.|.++|||.+|+|.++|+.
T Consensus 5 ~~A~vl~g~~di----~i~-~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~ 79 (354)
T KOG0024|consen 5 NLALVLRGKGDI----RIE-QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDE 79 (354)
T ss_pred cceeEEEccCce----eEe-eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccc
Confidence 789999999987 999 8999987 999999999999999999999965432 223467999999999999999999
Q ss_pred CCCCCCCCEEEeccCccc-------------------cCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhcc-chhHHH
Q 025278 79 VKKFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATET 138 (255)
Q Consensus 79 v~~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l-~~~~~t 138 (255)
|+++++||||+..+.-.+ ..-...+|++++|++.+++.|+++|++++++++|++ | ++.
T Consensus 80 Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~eP--LsV 157 (354)
T KOG0024|consen 80 VKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEP--LSV 157 (354)
T ss_pred ccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccc--hhh
Confidence 999999999986543111 011235799999999999999999999999998877 5 455
Q ss_pred HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcc-ccc---c---
Q 025278 139 AYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IED---L--- 211 (255)
Q Consensus 139 a~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~---~--- 211 (255)
+|||.+++++++|++|||+| +|++|+++..+|++++..+|++++..++|++.++++|++.+.+..... ..+ .
T Consensus 158 ~~HAcr~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~ 236 (354)
T KOG0024|consen 158 GVHACRRAGVKKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEK 236 (354)
T ss_pred hhhhhhhcCcccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHh
Confidence 99999999999999999999 899999999999998778899999999999999999999887765533 111 1
Q ss_pred --C-CCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 212 --P-EKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 212 --~-~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
. ..+|++|||+|...+...++...+ .+|+++++|+-..
T Consensus 237 ~~g~~~~d~~~dCsG~~~~~~aai~a~r-~gGt~vlvg~g~~ 277 (354)
T KOG0024|consen 237 ALGKKQPDVTFDCSGAEVTIRAAIKATR-SGGTVVLVGMGAE 277 (354)
T ss_pred hccccCCCeEEEccCchHHHHHHHHHhc-cCCEEEEeccCCC
Confidence 1 249999999999988888888888 6899999998554
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.2e-44 Score=289.76 Aligned_cols=243 Identities=30% Similarity=0.390 Sum_probs=205.5
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
++|.+..++.. ..+++. +++.|+++++||+|+++|||||++|++.+.|.++. ..+|.++|||.+|+|+++|++|++
T Consensus 11 ~g~~~~~~~G~-l~p~~~-~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~--s~~PlV~GHEiaG~VvkvGs~V~~ 86 (360)
T KOG0023|consen 11 FGWAARDPSGV-LSPEVF-SFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL--SKYPLVPGHEIAGVVVKVGSNVTG 86 (360)
T ss_pred EEEEEECCCCC-CCccee-EcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc--ccCCccCCceeeEEEEEECCCccc
Confidence 57888888775 445778 89999999999999999999999999999999864 789999999999999999999999
Q ss_pred CCCCCEEEec-----c--------------C-------ccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchh
Q 025278 82 FKVGDEVYGD-----I--------------N-------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA 135 (255)
Q Consensus 82 ~~~Gd~V~~~-----~--------------~-------~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~ 135 (255)
|++||||-.= | + ....++....|+|++|+++++..+++||++++.+.||.+.|+
T Consensus 87 ~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCa 166 (360)
T KOG0023|consen 87 FKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCA 166 (360)
T ss_pred ccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhc
Confidence 9999998321 1 1 112233445677999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh-hhHHHHHHcCCCEEEcCC-Ccccccc-C
Q 025278 136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYT-KENIEDL-P 212 (255)
Q Consensus 136 ~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~~~~g~~~v~~~~-~~~~~~~-~ 212 (255)
..|.|.++...++.||++|.|.| +|++|.+++|+|+++ |.+|+++++++ +|.+..+.+||+..++.. +.++.+. .
T Consensus 167 GITvYspLk~~g~~pG~~vgI~G-lGGLGh~aVq~AKAM-G~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~ 244 (360)
T KOG0023|consen 167 GITVYSPLKRSGLGPGKWVGIVG-LGGLGHMAVQYAKAM-GMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIM 244 (360)
T ss_pred ceEEeehhHHcCCCCCcEEEEec-CcccchHHHHHHHHh-CcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHH
Confidence 99999999999999999999999 677999999999997 99999999987 566667889999988876 5554332 3
Q ss_pred CCccEEEECCC--CccceeeeeeccccCCceEEEEeeccCC
Q 025278 213 EKFDVVFDAVG--KMCISIVYQKCDKFQEKSLINFGLFRQE 251 (255)
Q Consensus 213 ~~~d~vid~~G--~~~~~~~~~~~~~~~~G~~v~~G~~~~~ 251 (255)
+..|.++|++. +......+..++| .+|++|++|.+.++
T Consensus 245 ~~~dg~~~~v~~~a~~~~~~~~~~lk-~~Gt~V~vg~p~~~ 284 (360)
T KOG0023|consen 245 KTTDGGIDTVSNLAEHALEPLLGLLK-VNGTLVLVGLPEKP 284 (360)
T ss_pred HhhcCcceeeeeccccchHHHHHHhh-cCCEEEEEeCcCCc
Confidence 34566676666 7777777788888 89999999999863
No 5
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=6.4e-43 Score=275.62 Aligned_cols=238 Identities=34% Similarity=0.439 Sum_probs=218.1
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
|.+++++.|.. ++++++ +.|.|+|.++|++||..|+|+|..|..+..|.+. +.+.|+++|.|++|+|+++|+.+++
T Consensus 10 k~i~v~e~Ggy-dvlk~e-d~pv~~papgel~iknka~GlNfid~y~RkGlY~--~~plPytpGmEaaGvVvAvG~gvtd 85 (336)
T KOG1197|consen 10 KCIVVTEFGGY-DVLKLE-DRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD--PAPLPYTPGMEAAGVVVAVGEGVTD 85 (336)
T ss_pred eEEEEeccCCc-ceEEEe-eecCCCCCCCceEEeehhcCccHHHHHHhccccC--CCCCCcCCCcccceEEEEecCCccc
Confidence 67889999998 999999 9999999999999999999999999999999884 5688999999999999999999999
Q ss_pred CCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcCC
Q 025278 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGA 160 (255)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga~ 160 (255)
+++||||.... +.|.|+|+..+|...+.++|+.++++.+|++.+..+|||..++ ..++++|++||+|.|+
T Consensus 86 rkvGDrVayl~---------~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAA 156 (336)
T KOG1197|consen 86 RKVGDRVAYLN---------PFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAA 156 (336)
T ss_pred cccccEEEEec---------cchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecc
Confidence 99999998865 3799999999999999999999999999999999999999985 5789999999999999
Q ss_pred chHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc------CCCccEEEECCCCccceeeeeec
Q 025278 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGKMCISIVYQKC 234 (255)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~~~~d~vid~~G~~~~~~~~~~~ 234 (255)
|++|++++|++|.. ++.+|++..+.+|.+.+++.|+++.|+++.+++.+. .+|+|+++|.+|.+.. ..++.+
T Consensus 157 GGVGlll~Ql~ra~-~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~-~~sl~~ 234 (336)
T KOG1197|consen 157 GGVGLLLCQLLRAV-GAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTF-AKSLAA 234 (336)
T ss_pred ccHHHHHHHHHHhc-CcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhh-HHHHHH
Confidence 99999999999995 999999999999999999999999999998886653 4699999999998764 555777
Q ss_pred cccCCceEEEEeeccCCCCCC
Q 025278 235 DKFQEKSLINFGLFRQEVPKF 255 (255)
Q Consensus 235 ~~~~~G~~v~~G~~~~~~~~~ 255 (255)
++ +.|+++.||+.++..++|
T Consensus 235 Lk-~~G~mVSfG~asgl~~p~ 254 (336)
T KOG1197|consen 235 LK-PMGKMVSFGNASGLIDPI 254 (336)
T ss_pred hc-cCceEEEeccccCCCCCe
Confidence 77 789999999999876654
No 6
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.5e-42 Score=285.30 Aligned_cols=241 Identities=25% Similarity=0.337 Sum_probs=213.1
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
+||++..+++++ |+++ ++++++|++|||+||+.++|+|++|....+|..| ..+|.++|||++|+|+++|+.|+
T Consensus 3 ~~aAV~~~~~~P---l~i~-ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p---~~~P~vLGHEgAGiVe~VG~gVt 75 (366)
T COG1062 3 TRAAVAREAGKP---LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP---EGFPAVLGHEGAGIVEAVGEGVT 75 (366)
T ss_pred ceEeeeecCCCC---eEEE-EEecCCCCCCeEEEEEEEeeccccchhhhcCCCC---CCCceecccccccEEEEecCCcc
Confidence 579999999998 8999 8999999999999999999999999999999876 34899999999999999999999
Q ss_pred CCCCCCEEEeccCcccc--------------------------CC-----------CCC--CcceeeEEeeeCCceEeCC
Q 025278 81 KFKVGDEVYGDINEKAL--------------------------DH-----------PKR--NGSLAEYTAVEENLLALKP 121 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~--------------------------~~-----------~~~--~g~~~~~~~~~~~~~~~lp 121 (255)
++++||+|+..+...+. ++ .+. .++|+||.+++..++++++
T Consensus 76 ~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~ 155 (366)
T COG1062 76 SVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKID 155 (366)
T ss_pred ccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECC
Confidence 99999999876541110 11 011 2499999999999999999
Q ss_pred CCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEE
Q 025278 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA 200 (255)
Q Consensus 122 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v 200 (255)
++.+++.++++.|..+|.+-++ +.+++++|++|.|+| .|++|++++|-|+..+..++|++|.+++|++++++||++++
T Consensus 156 ~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~ 234 (366)
T COG1062 156 PDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHF 234 (366)
T ss_pred CCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCcee
Confidence 9999999999999999999987 789999999999999 99999999999999867788999999999999999999999
Q ss_pred EcCCCcc-ccc----cC-CCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 201 IDYTKEN-IED----LP-EKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 201 ~~~~~~~-~~~----~~-~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+|+.+.. ..+ .. .|+|.+|||+|....+..++.+.. +.|+.+.+|....
T Consensus 235 vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~-~~G~~v~iGv~~~ 289 (366)
T COG1062 235 VNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATH-RGGTSVIIGVAGA 289 (366)
T ss_pred ecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHh-cCCeEEEEecCCC
Confidence 9997663 332 23 399999999999999999999988 6999999998764
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=5.8e-41 Score=292.64 Aligned_cols=243 Identities=28% Similarity=0.341 Sum_probs=206.2
Q ss_pred CeEEEEcccCCC-----ccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEe
Q 025278 1 MKAWVYKEYGNS-----QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKV 75 (255)
Q Consensus 1 mka~v~~~~~~~-----~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~ 75 (255)
|||+++.++|.+ .+.++++ +.+.|+|+++||+||+.+++||++|++.+.|.++ ..+|.++|||++|+|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~-~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~---~~~p~i~GhE~~G~V~~v 76 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIE-EVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP---RPLPMALGHEAAGVVVEV 76 (371)
T ss_pred CcceEEEecccccccccCCCceEE-EeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC---CCCCccCCccceeEEEEe
Confidence 999999998753 2568898 8999999999999999999999999999988753 346899999999999999
Q ss_pred CCCCCCCCCCCEEEeccCccc------cC---------------CC------------------CCCcceeeEEeeeCCc
Q 025278 76 GSQVKKFKVGDEVYGDINEKA------LD---------------HP------------------KRNGSLAEYTAVEENL 116 (255)
Q Consensus 76 G~~v~~~~~Gd~V~~~~~~~~------~~---------------~~------------------~~~g~~~~~~~~~~~~ 116 (255)
|++++++++||||+..+...+ .. +. ...|+|+||++++...
T Consensus 77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~ 156 (371)
T cd08281 77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS 156 (371)
T ss_pred CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence 999999999999987421100 00 00 0137999999999999
Q ss_pred eEeCCCCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHH
Q 025278 117 LALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS 194 (255)
Q Consensus 117 ~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~ 194 (255)
++++|+++++++++.++++..|||+++ +...+++|++|+|+| +|++|++++|+|+.+ |+ +|++++.+++|++++++
T Consensus 157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~-G~~~Vi~~~~~~~r~~~a~~ 234 (371)
T cd08281 157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAA-GASQVVAVDLNEDKLALARE 234 (371)
T ss_pred eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHH
Confidence 999999999999999999999999997 568899999999998 799999999999996 87 68899999999999999
Q ss_pred cCCCEEEcCCCcccccc-----CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 195 LGADLAIDYTKENIEDL-----PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 195 ~g~~~v~~~~~~~~~~~-----~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+|+++++++.+.++.+. .+++|++|||+|.......++++++ ++|+++.+|...+
T Consensus 235 ~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~-~~G~iv~~G~~~~ 294 (371)
T cd08281 235 LGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITR-RGGTTVTAGLPDP 294 (371)
T ss_pred cCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHh-cCCEEEEEccCCC
Confidence 99999999876553321 2379999999998777777788888 7999999998753
No 8
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.4e-40 Score=286.92 Aligned_cols=241 Identities=29% Similarity=0.406 Sum_probs=204.5
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++..++. ++++ +.+.|+|.++||+||+.+++||++|++.+.+.++. ...+|.++|||++|+|+++|++++
T Consensus 1 mka~~~~~~~~----l~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~ 74 (339)
T cd08239 1 MRGAVFPGDRT----VELR-EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA-PAYQGVIPGHEPAGVVVAVGPGVT 74 (339)
T ss_pred CeEEEEecCCc----eEEE-ecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc-cCCCCceeccCceEEEEEECCCCc
Confidence 99999997654 5888 89999999999999999999999999988776432 223578999999999999999999
Q ss_pred CCCCCCEEEeccCccc-------------------cCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHH
Q 025278 81 KFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 141 (255)
++++||||+..+...+ ..+....|+|+||++++...++++|+++++++++.+++++.|||+
T Consensus 75 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 154 (339)
T cd08239 75 HFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH 154 (339)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence 9999999987642211 012234699999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCcccc---cc--CCCc
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIE---DL--PEKF 215 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~~--~~~~ 215 (255)
+++...+++|++|+|+| +|++|++++|+|+++ |++ +++++++++|+++++++|+++++++.+.+.. +. .+++
T Consensus 155 ~l~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~-G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~ 232 (339)
T cd08239 155 ALRRVGVSGRDTVLVVG-AGPVGLGALMLARAL-GAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGA 232 (339)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCC
Confidence 99888899999999998 699999999999996 888 9999999999999999999999998664421 11 2379
Q ss_pred cEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 216 DVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 216 d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
|++|||+|+......+.++++ .+|+++.+|...+
T Consensus 233 d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 266 (339)
T cd08239 233 DVAIECSGNTAARRLALEAVR-PWGRLVLVGEGGE 266 (339)
T ss_pred CEEEECCCCHHHHHHHHHHhh-cCCEEEEEcCCCC
Confidence 999999998876566677777 7899999998654
No 9
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.4e-40 Score=289.05 Aligned_cols=240 Identities=24% Similarity=0.288 Sum_probs=204.1
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++++++.+ ++++ +.|.|+|+++||+||+.++++|++|++.++|.++ ..+|.++|||++|+|+++|++++
T Consensus 2 mka~~~~~~~~~---~~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~---~~~p~i~G~e~~G~V~~vG~~v~ 74 (358)
T TIGR03451 2 VRGVIARSKGAP---VELE-TIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN---DEFPFLLGHEAAGVVEAVGEGVT 74 (358)
T ss_pred cEEEEEccCCCC---CEEE-EEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc---ccCCcccccceEEEEEEeCCCCc
Confidence 999999999875 5888 8999999999999999999999999999988653 34688999999999999999999
Q ss_pred CCCCCCEEEeccCcccc--------------------------CCC-----CCCcceeeEEeeeCCceEeCCCCCCHHhh
Q 025278 81 KFKVGDEVYGDINEKAL--------------------------DHP-----KRNGSLAEYTAVEENLLALKPKNLSFVEA 129 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~--------------------------~~~-----~~~g~~~~~~~~~~~~~~~lp~~~~~~~a 129 (255)
++++||||+..+...+. .+. ...|+|+||+.++...++++|++++++++
T Consensus 75 ~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~a 154 (358)
T TIGR03451 75 DVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAA 154 (358)
T ss_pred ccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHh
Confidence 99999999874211000 000 12589999999999999999999999999
Q ss_pred hccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCcc
Q 025278 130 ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKEN 207 (255)
Q Consensus 130 a~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~ 207 (255)
+.+++++.++|+++ +...+++|++|+|+| +|++|++++|+|+.+ |++ +++++++++|+++++++|+++++++.+.+
T Consensus 155 a~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~-G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~ 232 (358)
T TIGR03451 155 GLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALA-GASKIIAVDIDDRKLEWAREFGATHTVNSSGTD 232 (358)
T ss_pred hhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC
Confidence 99988888999887 567899999999998 799999999999996 875 88899999999999999999999987654
Q ss_pred ccc----c--CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 208 IED----L--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 208 ~~~----~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+.+ . ..++|++|||+|+......++.+++ ++|+++.+|...+
T Consensus 233 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~-~~G~iv~~G~~~~ 280 (358)
T TIGR03451 233 PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARD-LAGTVVLVGVPTP 280 (358)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhc-cCCEEEEECCCCC
Confidence 322 1 2379999999998766777777787 7899999998754
No 10
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.5e-40 Score=289.52 Aligned_cols=242 Identities=21% Similarity=0.290 Sum_probs=203.9
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++.++++. ++++ +.+.|+|+++||+||+.++|||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus 11 mka~~~~~~~~~---~~~~-e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~~p~i~GhE~~G~V~~vG~~v~ 85 (381)
T PLN02740 11 CKAAVAWGPGEP---LVME-EIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA-QRAYPRILGHEAAGIVESVGEGVE 85 (381)
T ss_pred eEEEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc-cCCCCccccccceEEEEEeCCCCC
Confidence 899999988864 5777 89999999999999999999999999999887532 235789999999999999999999
Q ss_pred CCCCCCEEEeccCcccc--------------C-------------C---------------CCCCcceeeEEeeeCCceE
Q 025278 81 KFKVGDEVYGDINEKAL--------------D-------------H---------------PKRNGSLAEYTAVEENLLA 118 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~--------------~-------------~---------------~~~~g~~~~~~~~~~~~~~ 118 (255)
++++||||+......+. . + ....|+|+||+++|.+.++
T Consensus 86 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~ 165 (381)
T PLN02740 86 DLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV 165 (381)
T ss_pred cCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence 99999999875421100 0 0 0025899999999999999
Q ss_pred eCCCCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcC
Q 025278 119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLG 196 (255)
Q Consensus 119 ~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g 196 (255)
++|++++.++++.+++++.|||+++ +..++++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|++.++++|
T Consensus 166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~-G~~~Vi~~~~~~~r~~~a~~~G 243 (381)
T PLN02740 166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARAR-GASKIIGVDINPEKFEKGKEMG 243 (381)
T ss_pred ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCCcEEEEcCChHHHHHHHHcC
Confidence 9999999999999998999999987 568899999999999 799999999999996 77 6999999999999999999
Q ss_pred CCEEEcCCCcc--ccc----c-CCCccEEEECCCCccceeeeeeccccCC-ceEEEEeeccC
Q 025278 197 ADLAIDYTKEN--IED----L-PEKFDVVFDAVGKMCISIVYQKCDKFQE-KSLINFGLFRQ 250 (255)
Q Consensus 197 ~~~v~~~~~~~--~~~----~-~~~~d~vid~~G~~~~~~~~~~~~~~~~-G~~v~~G~~~~ 250 (255)
+++++|+.+.+ +.+ . .+++|++||++|+......++.+++ ++ |+++.+|...+
T Consensus 244 a~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~-~g~G~~v~~G~~~~ 304 (381)
T PLN02740 244 ITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTH-DGWGLTVLLGIHPT 304 (381)
T ss_pred CcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhh-cCCCEEEEEccCCC
Confidence 99999876532 322 1 2379999999998877777777776 54 99999998764
No 11
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=3.4e-40 Score=284.95 Aligned_cols=238 Identities=18% Similarity=0.272 Sum_probs=195.3
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHc-CCCCCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|||+++.++++. +++ +++.| +.++||+||+.++|||++|++++. |..+....++|.++|||++|+|+++ ++
T Consensus 5 ~~~~~~~~~~~~----~~~-~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v 76 (343)
T PRK09880 5 TQSCVVAGKKDV----AVT-EQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DS 76 (343)
T ss_pred ceEEEEecCCce----EEE-ecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cC
Confidence 689999988876 888 78887 689999999999999999999875 4332223457899999999999999 78
Q ss_pred CCCCCCCEEEeccCcccc------------------CC-----CCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhH
Q 025278 80 KKFKVGDEVYGDINEKAL------------------DH-----PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT 136 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~------------------~~-----~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~ 136 (255)
++|++||||+..+...+. .+ ...+|+|+||++++.+.++++|+++++++++ +..++
T Consensus 77 ~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~ 155 (343)
T PRK09880 77 SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPL 155 (343)
T ss_pred ccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHH
Confidence 889999999865321100 01 1246999999999999999999999987655 44566
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCCcccccc---C
Q 025278 137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---P 212 (255)
Q Consensus 137 ~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~ 212 (255)
.++|+++++....+|++|+|+| +|++|++++|+|+++ |+ ++++++++++|+++++++|+++++|+.++++.+. .
T Consensus 156 ~~a~~al~~~~~~~g~~VlV~G-~G~vG~~aiqlak~~-G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~ 233 (343)
T PRK09880 156 AVAIHAAHQAGDLQGKRVFVSG-VGPIGCLIVAAVKTL-GAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEK 233 (343)
T ss_pred HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccC
Confidence 7899999877777899999998 699999999999996 77 6888999999999999999999999876554432 2
Q ss_pred CCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 213 EKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 213 ~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+++|++|||+|+......+.++++ ++|+++.+|....
T Consensus 234 g~~D~vid~~G~~~~~~~~~~~l~-~~G~iv~~G~~~~ 270 (343)
T PRK09880 234 GYFDVSFEVSGHPSSINTCLEVTR-AKGVMVQVGMGGA 270 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhh-cCCEEEEEccCCC
Confidence 359999999998776777788888 8999999997544
No 12
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=7.5e-40 Score=285.31 Aligned_cols=240 Identities=27% Similarity=0.361 Sum_probs=202.4
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++..++.. ++++ +.|.|+|.++||+||+.+++||++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 2 ~~a~~~~~~~~~---l~~~-~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~--~~~p~i~GhE~~G~V~~vG~~v~ 75 (368)
T TIGR02818 2 SRAAVAWAAGQP---LKIE-EVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE--GVFPVILGHEGAGIVEAVGEGVT 75 (368)
T ss_pred ceEEEEecCCCC---eEEE-EecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC--CCCCeeeccccEEEEEEECCCCc
Confidence 899999987754 6888 89999999999999999999999999999887642 35689999999999999999999
Q ss_pred CCCCCCEEEeccCccc--------------cC-------CC------------------CCCcceeeEEeeeCCceEeCC
Q 025278 81 KFKVGDEVYGDINEKA--------------LD-------HP------------------KRNGSLAEYTAVEENLLALKP 121 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~--------------~~-------~~------------------~~~g~~~~~~~~~~~~~~~lp 121 (255)
++++||||+..+...+ .. +. ...|+|+||+++|...++++|
T Consensus 76 ~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP 155 (368)
T TIGR02818 76 SVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKIN 155 (368)
T ss_pred cCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECC
Confidence 9999999987532100 00 00 013799999999999999999
Q ss_pred CCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCE
Q 025278 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL 199 (255)
Q Consensus 122 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~ 199 (255)
+++++++++.+++++.|+|+++ ++..+++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|+++++++|+++
T Consensus 156 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~-G~~~Vi~~~~~~~~~~~a~~~Ga~~ 233 (368)
T TIGR02818 156 PAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMA-KASRIIAIDINPAKFELAKKLGATD 233 (368)
T ss_pred CCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCe
Confidence 9999999999999999999998 568899999999998 799999999999996 77 7999999999999999999999
Q ss_pred EEcCCC--ccccc----c-CCCccEEEECCCCccceeeeeeccccC-CceEEEEeecc
Q 025278 200 AIDYTK--ENIED----L-PEKFDVVFDAVGKMCISIVYQKCDKFQ-EKSLINFGLFR 249 (255)
Q Consensus 200 v~~~~~--~~~~~----~-~~~~d~vid~~G~~~~~~~~~~~~~~~-~G~~v~~G~~~ 249 (255)
++++.+ .++.+ . .+++|++|||+|+......++++++ + +|+++.+|...
T Consensus 234 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~-~~~G~~v~~g~~~ 290 (368)
T TIGR02818 234 CVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCH-KGWGESIIIGVAG 290 (368)
T ss_pred EEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhh-cCCCeEEEEeccC
Confidence 998763 22211 1 2379999999998777777777776 5 49999999864
No 13
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2.7e-39 Score=277.70 Aligned_cols=238 Identities=24% Similarity=0.260 Sum_probs=201.2
Q ss_pred EEEEcccCCCc-cceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 3 AWVYKEYGNSQ-SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 3 a~v~~~~~~~~-~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
|+.+..+|.+. ..++++ +.|.|+|+++||+||+.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~g~~~~~~l~~~-~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~ 77 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFV-ERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV--HRPRVTPGHEVVGEVAGRGADAGG 77 (329)
T ss_pred CeeeecCCcCCCCCceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC--CCCCccCCcceEEEEEEECCCCcc
Confidence 46677777542 357899 89999999999999999999999999999987642 234789999999999999999999
Q ss_pred CCCCCEEEeccC-----c--------------cccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 82 FKVGDEVYGDIN-----E--------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 82 ~~~Gd~V~~~~~-----~--------------~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
+++||||+..+. . ....+...+|+|+||+.+|...++++|+++++++++.+++++.|||++
T Consensus 78 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~ 157 (329)
T TIGR02822 78 FAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRA 157 (329)
T ss_pred cCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHH
Confidence 999999975321 0 001122346999999999999999999999999999889999999999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECC
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~ 222 (255)
+++.++++|++|+|+| +|++|++++|+|+.+ |+++++++++++|+++++++|+++++++.+.. .+++|+++++.
T Consensus 158 ~~~~~~~~g~~VlV~G-~g~iG~~a~~~a~~~-G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----~~~~d~~i~~~ 231 (329)
T TIGR02822 158 LLRASLPPGGRLGLYG-FGGSAHLTAQVALAQ-GATVHVMTRGAAARRLALALGAASAGGAYDTP----PEPLDAAILFA 231 (329)
T ss_pred HHhcCCCCCCEEEEEc-CCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHhCCceeccccccC----cccceEEEECC
Confidence 9888899999999999 599999999999995 88999999999999999999999999864321 24789999999
Q ss_pred CCccceeeeeeccccCCceEEEEeeccC
Q 025278 223 GKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 223 G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
|.......++++++ ++|+++.+|...+
T Consensus 232 ~~~~~~~~~~~~l~-~~G~~v~~G~~~~ 258 (329)
T TIGR02822 232 PAGGLVPPALEALD-RGGVLAVAGIHLT 258 (329)
T ss_pred CcHHHHHHHHHhhC-CCcEEEEEeccCc
Confidence 87777777788888 7999999998543
No 14
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=5.9e-39 Score=281.26 Aligned_cols=238 Identities=23% Similarity=0.300 Sum_probs=190.5
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCC-------CCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEE
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-------EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVE 73 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~-------~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~ 73 (255)
|||+++.++++. +++ +.|.|+|+ +|||+||+.++|||++|+++++|.++ ..+|.++|||++|+|+
T Consensus 3 mka~v~~~~~~~----~~~-e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~---~~~p~i~GhE~~G~V~ 74 (393)
T TIGR02819 3 NRGVVYLGPGKV----EVQ-DIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT---APTGLVLGHEITGEVI 74 (393)
T ss_pred ceEEEEecCCce----eEE-eccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC---CCCCccccceeEEEEE
Confidence 999999988865 888 89988874 68999999999999999999988643 3568999999999999
Q ss_pred EeCCCCCCCCCCCEEEeccCccc--------------cC----------CC----CCCcceeeEEeeeCC--ceEeCCCC
Q 025278 74 KVGSQVKKFKVGDEVYGDINEKA--------------LD----------HP----KRNGSLAEYTAVEEN--LLALKPKN 123 (255)
Q Consensus 74 ~~G~~v~~~~~Gd~V~~~~~~~~--------------~~----------~~----~~~g~~~~~~~~~~~--~~~~lp~~ 123 (255)
++|++++++++||||+..+...+ .. +. ..+|+|+||+++|.. .++++|++
T Consensus 75 ~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~ 154 (393)
T TIGR02819 75 EKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDR 154 (393)
T ss_pred EEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCc
Confidence 99999999999999976421100 00 10 135999999999964 79999998
Q ss_pred CCH----HhhhccchhHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEE-EecChhhHHHHHHcCCC
Q 025278 124 LSF----VEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVA-ATSSTAKLDLLRSLGAD 198 (255)
Q Consensus 124 ~~~----~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~-~~~~~~~~~~~~~~g~~ 198 (255)
++. .+++.+..++.++|+++++..+++|++|+|.| +|++|++++|+|+.+ |+++++ ++++++|+++++++|++
T Consensus 155 ~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~-Ga~~vi~~d~~~~r~~~a~~~Ga~ 232 (393)
T TIGR02819 155 DQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAG-AGPVGLAAAASAQLL-GAAVVIVGDLNPARLAQARSFGCE 232 (393)
T ss_pred ccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHHHHHcCCe
Confidence 753 34566777888999999888899999999976 899999999999996 877554 56788899999999997
Q ss_pred EEEcCCCccccc----c--CCCccEEEECCCCc--------------cceeeeeeccccCCceEEEEeecc
Q 025278 199 LAIDYTKENIED----L--PEKFDVVFDAVGKM--------------CISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 199 ~v~~~~~~~~~~----~--~~~~d~vid~~G~~--------------~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
.+.+..+.++.+ . .+++|++||++|.+ .....++.+++ ++|+++++|.+.
T Consensus 233 ~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~i~~~G~~~ 302 (393)
T TIGR02819 233 TVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTR-VGGAIGIPGLYV 302 (393)
T ss_pred EEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhh-CCCEEEEeeecC
Confidence 543333323221 1 24799999999986 35677788888 899999999973
No 15
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=7.7e-39 Score=279.03 Aligned_cols=240 Identities=26% Similarity=0.335 Sum_probs=201.7
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++..++.. ++++ +.|.|+|+++||+||+.+++||++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 3 ~~a~~~~~~~~~---~~~~-~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~--~~~p~v~G~E~~G~V~~vG~~v~ 76 (368)
T cd08300 3 CKAAVAWEAGKP---LSIE-EVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE--GLFPVILGHEGAGIVESVGEGVT 76 (368)
T ss_pred ceEEEEecCCCC---cEEE-EeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc--CCCCceeccceeEEEEEeCCCCc
Confidence 899998877654 6888 89999999999999999999999999999887642 35789999999999999999999
Q ss_pred CCCCCCEEEeccCcccc------C---------------C------------------CCCCcceeeEEeeeCCceEeCC
Q 025278 81 KFKVGDEVYGDINEKAL------D---------------H------------------PKRNGSLAEYTAVEENLLALKP 121 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~------~---------------~------------------~~~~g~~~~~~~~~~~~~~~lp 121 (255)
++++||||+..+...+. . + ....|+|+||++++...++++|
T Consensus 77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 156 (368)
T cd08300 77 SVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKIN 156 (368)
T ss_pred cCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCC
Confidence 99999999875221000 0 0 0013689999999999999999
Q ss_pred CCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCE
Q 025278 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL 199 (255)
Q Consensus 122 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~ 199 (255)
+++++++++.+++++.|+|+++ +...+++|++|+|+| +|++|++++|+|+.+ |+ ++++++++++|+++++++|+++
T Consensus 157 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~-G~~~vi~~~~~~~~~~~~~~lGa~~ 234 (368)
T cd08300 157 PEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAA-GASRIIGIDINPDKFELAKKFGATD 234 (368)
T ss_pred CCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCE
Confidence 9999999999998999999987 568899999999998 799999999999996 88 6999999999999999999999
Q ss_pred EEcCCCc--cccc----c-CCCccEEEECCCCccceeeeeeccccCC-ceEEEEeecc
Q 025278 200 AIDYTKE--NIED----L-PEKFDVVFDAVGKMCISIVYQKCDKFQE-KSLINFGLFR 249 (255)
Q Consensus 200 v~~~~~~--~~~~----~-~~~~d~vid~~G~~~~~~~~~~~~~~~~-G~~v~~G~~~ 249 (255)
++++.+. ++.+ . .+++|+|||++|+......+.++++ ++ |+++.+|...
T Consensus 235 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~-~~~G~~v~~g~~~ 291 (368)
T cd08300 235 CVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACH-KGWGTSVIIGVAA 291 (368)
T ss_pred EEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhc-cCCCeEEEEccCC
Confidence 9988653 2222 1 2379999999998766677777776 54 9999999874
No 16
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.2e-38 Score=277.81 Aligned_cols=241 Identities=22% Similarity=0.283 Sum_probs=202.4
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++.++++. ++++ +.+.|+|+++||+||+.+++||++|++.++|..+ ...+|.++|||++|+|+++|++++
T Consensus 3 ~ka~~~~~~~~~---~~l~-~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~ 76 (369)
T cd08301 3 CKAAVAWEAGKP---LVIE-EVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ--TPLFPRILGHEAAGIVESVGEGVT 76 (369)
T ss_pred cEEEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC--CCCCCcccccccceEEEEeCCCCC
Confidence 899999987765 6888 8999999999999999999999999999988754 346789999999999999999999
Q ss_pred CCCCCCEEEeccCcccc------C-----------------------------C-----CCCCcceeeEEeeeCCceEeC
Q 025278 81 KFKVGDEVYGDINEKAL------D-----------------------------H-----PKRNGSLAEYTAVEENLLALK 120 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~------~-----------------------------~-----~~~~g~~~~~~~~~~~~~~~l 120 (255)
++++||||+..+...+. . + ....|+|+||++++...++++
T Consensus 77 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i 156 (369)
T cd08301 77 DLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKI 156 (369)
T ss_pred ccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEEC
Confidence 99999999875321000 0 0 002478999999999999999
Q ss_pred CCCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCC
Q 025278 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD 198 (255)
Q Consensus 121 p~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~ 198 (255)
|+++++++++.+++++.|+|+++ +..++++|++|+|+| +|++|++++|+|+.+ |+ ++++++++++|+++++++|++
T Consensus 157 P~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~-G~~~vi~~~~~~~~~~~~~~~Ga~ 234 (369)
T cd08301 157 NPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIR-GASRIIGVDLNPSKFEQAKKFGVT 234 (369)
T ss_pred CCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999998999999987 568899999999998 699999999999996 77 799999999999999999999
Q ss_pred EEEcCCCc--cccc-----cCCCccEEEECCCCccceeeeeeccccCC-ceEEEEeeccC
Q 025278 199 LAIDYTKE--NIED-----LPEKFDVVFDAVGKMCISIVYQKCDKFQE-KSLINFGLFRQ 250 (255)
Q Consensus 199 ~v~~~~~~--~~~~-----~~~~~d~vid~~G~~~~~~~~~~~~~~~~-G~~v~~G~~~~ 250 (255)
.++++.+. .+.+ ..+++|++||++|+......++.+++ ++ |+++.+|....
T Consensus 235 ~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~-~~~g~~v~~g~~~~ 293 (369)
T cd08301 235 EFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVH-DGWGVTVLLGVPHK 293 (369)
T ss_pred eEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhh-cCCCEEEEECcCCC
Confidence 99987642 2221 12379999999998766666777777 64 99999998764
No 17
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.3e-38 Score=276.25 Aligned_cols=239 Identities=21% Similarity=0.281 Sum_probs=188.7
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCC-CCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD-SPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|||++++.++. + ++++ +.|.|+|+++||+||+.+++||++|++.++|.++..+ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~~~--~-l~~~-~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~- 75 (355)
T cd08230 1 MKAIAVKPGKP--G-VRVV-DIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG- 75 (355)
T ss_pred CceeEecCCCC--C-CeEE-eCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-
Confidence 99999986443 2 6888 8999999999999999999999999999998754322 246789999999999999999
Q ss_pred CCCCCCCEEEeccCccc------cC--------------CC-CCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHH
Q 025278 80 KKFKVGDEVYGDINEKA------LD--------------HP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET 138 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~------~~--------------~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~t 138 (255)
++|++||||+......+ .. +. ..+|+|+||++++.+.++++|++++ + ++.+..++.+
T Consensus 76 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~ 153 (355)
T cd08230 76 SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSV 153 (355)
T ss_pred CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHH
Confidence 99999999987532210 00 11 1368999999999999999999998 3 3444444444
Q ss_pred HHHHHH-------hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec---ChhhHHHHHHcCCCEEEcCCCccc
Q 025278 139 AYEGLE-------RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAIDYTKENI 208 (255)
Q Consensus 139 a~~~l~-------~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~v~~~~~~~~ 208 (255)
+++++. ....++|++|+|+| +|++|++++|+|+.+ |++++++++ +++|+++++++|++. +++.++++
T Consensus 154 ~~~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~-G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~ 230 (355)
T cd08230 154 VEKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLR-GFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPV 230 (355)
T ss_pred HHHHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccch
Confidence 444442 12367899999998 699999999999996 889999987 688999999999987 56655443
Q ss_pred cc--cCCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 209 ED--LPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 209 ~~--~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
.+ ...++|+||||+|+......+++.++ ++|+++++|...+
T Consensus 231 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~G~~~~ 273 (355)
T cd08230 231 AEVKLVGEFDLIIEATGVPPLAFEALPALA-PNGVVILFGVPGG 273 (355)
T ss_pred hhhhhcCCCCEEEECcCCHHHHHHHHHHcc-CCcEEEEEecCCC
Confidence 21 23579999999998766677788887 7899999998765
No 18
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.3e-38 Score=276.69 Aligned_cols=243 Identities=25% Similarity=0.343 Sum_probs=195.5
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
||++.+...+.. ..+++. +.+.|+|+++||+||+.++|||++|++.+.|.++ ...+|.++|||++|+|+++|++++
T Consensus 11 ~~~~~~~~~~~~-~~l~~~-~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~--~~~~p~i~GhE~~G~V~~vG~~v~ 86 (360)
T PLN02586 11 QKAFGWAARDPS-GVLSPF-HFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG--FTRYPIVPGHEIVGIVTKLGKNVK 86 (360)
T ss_pred hheeEEEecCCC-CCceEE-eecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC--CCCCCccCCcceeEEEEEECCCCC
Confidence 555555544443 446777 7888999999999999999999999999988654 235689999999999999999999
Q ss_pred CCCCCCEEEec-----cCcc----------cc-----------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccch
Q 025278 81 KFKVGDEVYGD-----INEK----------AL-----------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL 134 (255)
Q Consensus 81 ~~~~Gd~V~~~-----~~~~----------~~-----------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~ 134 (255)
++++||||+.. |..+ +. .+...+|+|+||+++|.+.++++|+++++++++.+++
T Consensus 87 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~ 166 (360)
T PLN02586 87 KFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLC 166 (360)
T ss_pred ccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhc
Confidence 99999999742 1110 00 0122369999999999999999999999999999999
Q ss_pred hHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhH-HHHHHcCCCEEEcCCCc-ccccc
Q 025278 135 ATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGADLAIDYTKE-NIEDL 211 (255)
Q Consensus 135 ~~~ta~~~l~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~-~~~~~~g~~~v~~~~~~-~~~~~ 211 (255)
+..|+|+++.. ..+++|++|+|.| +|++|++++|+|+.+ |+++++++.+++++ +.++++|+++++++.+. .+.+.
T Consensus 167 ~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~ 244 (360)
T PLN02586 167 AGITVYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAF-GLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAA 244 (360)
T ss_pred chHHHHHHHHHhcccCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhh
Confidence 99999999864 5568999999988 799999999999996 89998887766654 55689999999987543 22333
Q ss_pred CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 212 PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 212 ~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
.+++|++||++|.......+.++++ ++|+++.+|...+
T Consensus 245 ~~~~D~vid~~g~~~~~~~~~~~l~-~~G~iv~vG~~~~ 282 (360)
T PLN02586 245 IGTMDYIIDTVSAVHALGPLLGLLK-VNGKLITLGLPEK 282 (360)
T ss_pred cCCCCEEEECCCCHHHHHHHHHHhc-CCcEEEEeCCCCC
Confidence 3479999999997766666788887 7899999997654
No 19
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.6e-39 Score=261.63 Aligned_cols=243 Identities=24% Similarity=0.305 Sum_probs=211.5
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+|..+++++ |.++ |+..++|+..||+||+.++++|++|...+.|..+ ...+|.++|||++|+|+.+|+.|+
T Consensus 8 CKAAV~w~a~~P---L~IE-ei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~--~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 8 CKAAVAWEAGKP---LVIE-EIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP--EGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred EeEeeeccCCCC---eeEE-EEEeCCCCCceEEEEEEEEeeccccceeecCCCc--cccCceEecccceeEEEEecCCcc
Confidence 689999999999 7888 8999999999999999999999999999999863 457899999999999999999999
Q ss_pred CCCCCCEEEeccCccc---------------------------cC-------------CCCCCcceeeEEeeeCCceEeC
Q 025278 81 KFKVGDEVYGDINEKA---------------------------LD-------------HPKRNGSLAEYTAVEENLLALK 120 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~---------------------------~~-------------~~~~~g~~~~~~~~~~~~~~~l 120 (255)
++++||+|+..+...+ .+ ++-...+|+||.+++...+.+|
T Consensus 82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kI 161 (375)
T KOG0022|consen 82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKI 161 (375)
T ss_pred ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEec
Confidence 9999999986533110 00 0111248999999999999999
Q ss_pred CCCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCE
Q 025278 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL 199 (255)
Q Consensus 121 p~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~ 199 (255)
++..+++.++++.+.+.|+|-|. +.+++++|++|.|+| .|++|+++++-||+.+..++|.+|.+++|.+.++++|+..
T Consensus 162 d~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe 240 (375)
T KOG0022|consen 162 DPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATE 240 (375)
T ss_pred CCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcce
Confidence 99999999999999999999987 789999999999999 9999999999999987789999999999999999999999
Q ss_pred EEcCCCcc--ccc----c-CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 200 AIDYTKEN--IED----L-PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 200 v~~~~~~~--~~~----~-~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
.+|+.+.. ..+ + ..|+|.-|||+|....+..++...+.-.|+-+.+|....
T Consensus 241 ~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~ 298 (375)
T KOG0022|consen 241 FINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA 298 (375)
T ss_pred ecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC
Confidence 99987321 111 1 358999999999999999998888733499999998764
No 20
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.1e-38 Score=276.97 Aligned_cols=238 Identities=24% Similarity=0.273 Sum_probs=198.6
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++.++++. ++++ +.|.|+|+++||+||+.++|||++|++.+.+.. .+|.++|||++|+|+++|++++
T Consensus 13 mka~~~~~~~~~---~~~~-e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~-----~~p~i~GhE~~G~V~~vG~~v~ 83 (378)
T PLN02827 13 CRAAVAWGAGEA---LVME-EVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA-----LFPRIFGHEASGIVESIGEGVT 83 (378)
T ss_pred eEEEEEecCCCC---ceEE-EeecCCCCCCEEEEEEEEEecChhHHHHhcCCC-----CCCeeecccceEEEEEcCCCCc
Confidence 899999987654 6888 899999999999999999999999999887642 3578999999999999999999
Q ss_pred CCCCCCEEEeccCcccc--------------C--------------------C-----CCCCcceeeEEeeeCCceEeCC
Q 025278 81 KFKVGDEVYGDINEKAL--------------D--------------------H-----PKRNGSLAEYTAVEENLLALKP 121 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~--------------~--------------------~-----~~~~g~~~~~~~~~~~~~~~lp 121 (255)
++++||||+......+. . + ....|+|+||+.+|...++++|
T Consensus 84 ~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP 163 (378)
T PLN02827 84 EFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVD 163 (378)
T ss_pred ccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECC
Confidence 99999999876421000 0 0 0024899999999999999999
Q ss_pred CCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCE
Q 025278 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADL 199 (255)
Q Consensus 122 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~ 199 (255)
+++++++++.+++++.++|+++ +..++++|++|+|+| +|++|++++|+|+++ |++ +++++++++|+++++++|+++
T Consensus 164 ~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~-G~~~vi~~~~~~~~~~~a~~lGa~~ 241 (378)
T PLN02827 164 PLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLR-GASQIIGVDINPEKAEKAKTFGVTD 241 (378)
T ss_pred CCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCcE
Confidence 9999999988888888899877 567899999999998 799999999999996 774 777788999999999999999
Q ss_pred EEcCCCc--cccc----c-CCCccEEEECCCCccceeeeeeccccCC-ceEEEEeeccC
Q 025278 200 AIDYTKE--NIED----L-PEKFDVVFDAVGKMCISIVYQKCDKFQE-KSLINFGLFRQ 250 (255)
Q Consensus 200 v~~~~~~--~~~~----~-~~~~d~vid~~G~~~~~~~~~~~~~~~~-G~~v~~G~~~~ 250 (255)
++++.+. ++.+ . .+++|++||++|.......++.+++ ++ |+++.+|...+
T Consensus 242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~-~g~G~iv~~G~~~~ 299 (378)
T PLN02827 242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCS-DGWGLTVTLGVPKA 299 (378)
T ss_pred EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhc-cCCCEEEEECCcCC
Confidence 9987642 2222 1 2379999999998766677788887 66 99999998754
No 21
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.4e-38 Score=274.60 Aligned_cols=234 Identities=20% Similarity=0.166 Sum_probs=184.8
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCC--CCCCCcccccceEEEEEEeCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT--DSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~--~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|++++++|++. +++ +.|.|+ +++||+|||.++|||++|+++++|.++.. ...+|.++|||++|+|++.|.+
T Consensus 4 ~~~~~~~~~~~----~~~-~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~- 76 (341)
T cd08237 4 QVYRLVRPKFF----EVT-YEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG- 76 (341)
T ss_pred cceEEeccceE----EEe-ecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC-
Confidence 47888887764 888 889985 99999999999999999999999875321 1357999999999999998764
Q ss_pred CCCCCCCEEEeccCcccc---------------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH
Q 025278 80 KKFKVGDEVYGDINEKAL---------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE 144 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~---------------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~ 144 (255)
+|++||||+..+...+. .+...+|+|+||+++|.+.++++|+++++++++.+ .+..++|+++.
T Consensus 77 -~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~ 154 (341)
T cd08237 77 -TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAIS 154 (341)
T ss_pred -ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHHH
Confidence 69999999875431110 11124699999999999999999999999877644 46777999884
Q ss_pred h---cccCCCCEEEEEcCCchHHHHHHHHHHH-hcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEE
Q 025278 145 R---SAFSAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFD 220 (255)
Q Consensus 145 ~---~~~~~g~~VlI~ga~g~~G~~a~~~a~~-~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid 220 (255)
. ..+++|++|+|+| +|++|++++|+|++ +++.++++++++++|++++++++++..++. ..+ ..++|+|||
T Consensus 155 ~~~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~----~~~-~~g~d~viD 228 (341)
T cd08237 155 RFEQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD----IPE-DLAVDHAFE 228 (341)
T ss_pred HHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh----hhh-ccCCcEEEE
Confidence 3 4578999999999 79999999999986 445789999999999999988776654431 111 126999999
Q ss_pred CCCC---ccceeeeeeccccCCceEEEEeeccCC
Q 025278 221 AVGK---MCISIVYQKCDKFQEKSLINFGLFRQE 251 (255)
Q Consensus 221 ~~G~---~~~~~~~~~~~~~~~G~~v~~G~~~~~ 251 (255)
++|+ ..+...++++++ ++|+++++|...++
T Consensus 229 ~~G~~~~~~~~~~~~~~l~-~~G~iv~~G~~~~~ 261 (341)
T cd08237 229 CVGGRGSQSAINQIIDYIR-PQGTIGLMGVSEYP 261 (341)
T ss_pred CCCCCccHHHHHHHHHhCc-CCcEEEEEeecCCC
Confidence 9995 345566777888 89999999986543
No 22
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=6.8e-38 Score=272.79 Aligned_cols=241 Identities=24% Similarity=0.297 Sum_probs=201.1
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++..+++. ++++ +.|.|++.++||+||+.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++
T Consensus 3 ~ka~~~~~~~~~---~~~~-~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~---~~~p~i~G~e~~G~V~~vG~~v~ 75 (365)
T cd08277 3 CKAAVAWEAGKP---LVIE-EIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA---TLFPVILGHEGAGIVESVGEGVT 75 (365)
T ss_pred cEEEEEccCCCC---cEEE-EEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC---CCCCeecccceeEEEEeeCCCCc
Confidence 789999877654 6888 8999999999999999999999999999988653 45688999999999999999999
Q ss_pred CCCCCCEEEeccCccc------cC--------------C------------------CCCCcceeeEEeeeCCceEeCCC
Q 025278 81 KFKVGDEVYGDINEKA------LD--------------H------------------PKRNGSLAEYTAVEENLLALKPK 122 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------~~--------------~------------------~~~~g~~~~~~~~~~~~~~~lp~ 122 (255)
++++||||+..+...+ .. + ....|+|+||+.++.+.++++|+
T Consensus 76 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~ 155 (365)
T cd08277 76 NLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDP 155 (365)
T ss_pred cCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCC
Confidence 9999999987532100 00 0 01248999999999999999999
Q ss_pred CCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEE
Q 025278 123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLA 200 (255)
Q Consensus 123 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v 200 (255)
++++++++.+++++.|||+++ +...+++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|+++++++|++++
T Consensus 156 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~~ 233 (365)
T cd08277 156 AAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIA-GASRIIGVDINEDKFEKAKEFGATDF 233 (365)
T ss_pred CCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCcE
Confidence 999999999999999999987 568899999999998 799999999999996 77 68899999999999999999999
Q ss_pred EcCCCcc--ccc-----cCCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 201 IDYTKEN--IED-----LPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 201 ~~~~~~~--~~~-----~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+++.+.+ +.+ ..+++|++|||+|+......+++.++..+|+++.+|...+
T Consensus 234 i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 290 (365)
T cd08277 234 INPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG 290 (365)
T ss_pred eccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc
Confidence 9876432 111 1247999999999776666667777623599999998753
No 23
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=4.2e-38 Score=268.04 Aligned_cols=231 Identities=16% Similarity=0.219 Sum_probs=183.9
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecC-hHhHHHHcCCCCCCC-CCCCcccccceEEEEEEeCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALN-PIDFKRMLGAFSATD-SPLPTIPGYDVAGVVEKVGSQ 78 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~-~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~~G~~ 78 (255)
|||+++.+++. ++++ +.+.|+|+++||+||+.+++|| ++|++.++|.++... ..+|.++|||++|+|+++|++
T Consensus 2 ~ka~~~~~~~~----l~~~-e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~ 76 (308)
T TIGR01202 2 TQAIVLSGPNQ----IELR-EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD 76 (308)
T ss_pred ceEEEEeCCCe----EEEE-EecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence 79999987664 5888 8999999999999999999995 799999988765322 357999999999999999999
Q ss_pred CCCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHhcccCCCCEEEEEc
Q 025278 79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158 (255)
Q Consensus 79 v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~g 158 (255)
+ ++++||||+..+..+........|+|+||+++|.+.++++|++++++. +.+. ...|||+++++.. .++++|+|+|
T Consensus 77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~~~-~~~~~vlV~G 152 (308)
T TIGR01202 77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAGAE-VKVLPDLIVG 152 (308)
T ss_pred C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHhcc-cCCCcEEEEC
Confidence 8 599999999743211111111369999999999999999999999864 4443 4678999997643 3688999998
Q ss_pred CCchHHHHHHHHHHHhcCCcEE-EEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCccceeeeeecccc
Q 025278 159 GAGGVGTMVIQLAKHVFGASKV-AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMCISIVYQKCDKF 237 (255)
Q Consensus 159 a~g~~G~~a~~~a~~~~g~~vi-~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~~~~~~~~~~~ 237 (255)
+|++|++++|+|+++ |++++ +++.+++|++.++++ .++|+.+. ..+++|+||||+|+......++++++
T Consensus 153 -~G~vG~~a~q~ak~~-G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----~~~g~Dvvid~~G~~~~~~~~~~~l~- 222 (308)
T TIGR01202 153 -HGTLGRLLARLTKAA-GGSPPAVWETNPRRRDGATGY---EVLDPEKD----PRRDYRAIYDASGDPSLIDTLVRRLA- 222 (308)
T ss_pred -CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHhhhhc---cccChhhc----cCCCCCEEEECCCCHHHHHHHHHhhh-
Confidence 899999999999996 88754 566777787766553 45665332 23579999999999877777888888
Q ss_pred CCceEEEEeeccC
Q 025278 238 QEKSLINFGLFRQ 250 (255)
Q Consensus 238 ~~G~~v~~G~~~~ 250 (255)
++|+++++|.+.+
T Consensus 223 ~~G~iv~~G~~~~ 235 (308)
T TIGR01202 223 KGGEIVLAGFYTE 235 (308)
T ss_pred cCcEEEEEeecCC
Confidence 8999999998754
No 24
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.4e-37 Score=268.39 Aligned_cols=242 Identities=29% Similarity=0.376 Sum_probs=188.7
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCc-ccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPT-IPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~-~~G~e~~G~V~~~G~~v 79 (255)
||++++..++.. .+++ +.+.|.+.++||+||+.++|||+||++.+++..+. .+.|. ++|||++|+|+++| .+
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~--~~~~~~i~GHE~~G~V~evG-~~ 73 (350)
T COG1063 1 MKAAVVYVGGGD---VRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF--VPPGDIILGHEFVGEVVEVG-VV 73 (350)
T ss_pred CceeEEEecCCc---cccc-cCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC--CCCCCcccCccceEEEEEec-cc
Confidence 888888887765 2355 66667789999999999999999999999997542 23344 99999999999999 77
Q ss_pred CCCCCCCEEEeccCcc--------------cc---------CCCCCCcceeeEEeeeCCceEe-CCCCCCHHhhhccchh
Q 025278 80 KKFKVGDEVYGDINEK--------------AL---------DHPKRNGSLAEYTAVEENLLAL-KPKNLSFVEAASLPLA 135 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~--------------~~---------~~~~~~g~~~~~~~~~~~~~~~-lp~~~~~~~aa~l~~~ 135 (255)
+.+++||||+..+... +. .+...+|+|+||+.+|.+.++. +|+++ ..+++++..+
T Consensus 74 ~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~ep 152 (350)
T COG1063 74 RGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEP 152 (350)
T ss_pred cCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcCh
Confidence 8899999998764311 11 0111479999999999765555 57887 4566667667
Q ss_pred HHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH-cCCCEEEcCCCcccc----
Q 025278 136 TETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIE---- 209 (255)
Q Consensus 136 ~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~---- 209 (255)
+.++|++. .....+++.+|+|.| +|++|++++++++.++..++++++.+++|++++++ .|++.+++...++..
T Consensus 153 la~~~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~ 231 (350)
T COG1063 153 LATAYHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEIL 231 (350)
T ss_pred hhhhhhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHH
Confidence 77798774 455555666999999 99999999999999755778888999999999998 667777766543211
Q ss_pred ccC--CCccEEEECCCCccceeeeeeccccCCceEEEEeeccCCC
Q 025278 210 DLP--EKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQEV 252 (255)
Q Consensus 210 ~~~--~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~~~ 252 (255)
+.. .++|++|||+|...+...++++.+ ++|+++++|.++++.
T Consensus 232 ~~t~g~g~D~vie~~G~~~~~~~ai~~~r-~gG~v~~vGv~~~~~ 275 (350)
T COG1063 232 ELTGGRGADVVIEAVGSPPALDQALEALR-PGGTVVVVGVYGGED 275 (350)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHhc-CCCEEEEEeccCCcc
Confidence 112 379999999998887888899998 899999999998764
No 25
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=3.1e-37 Score=264.52 Aligned_cols=236 Identities=27% Similarity=0.379 Sum_probs=197.2
Q ss_pred CeEEEEcccCCCc--cceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCC
Q 025278 1 MKAWVYKEYGNSQ--SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78 (255)
Q Consensus 1 mka~v~~~~~~~~--~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~ 78 (255)
|||+++++++.+. +.++++ +.|.|+|+++||+||+.++++|++|++.+.|.++. ...+|.++|||++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~-~~~~p~v~G~e~~G~V~~vG~~ 78 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLP-EPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS-TKALPVPPGFEGSGTVVAAGGG 78 (324)
T ss_pred CeEEEEeecCCCccccEEEec-ccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCcCCCcceEEEEEEECCC
Confidence 9999999888531 246788 78999999999999999999999999999887642 2356889999999999999999
Q ss_pred CCC-CCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHhcccCCCCEEEEE
Q 025278 79 VKK-FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL 157 (255)
Q Consensus 79 v~~-~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ 157 (255)
+.+ +++||+|++... .+|+|+||+++|.+.++++|+++++++++.+++...|||..++.... ++++++|+
T Consensus 79 v~~~~~vGd~V~~~~~--------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~-~~~~vlv~ 149 (324)
T cd08291 79 PLAQSLIGKRVAFLAG--------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETARE-EGAKAVVH 149 (324)
T ss_pred ccccCCCCCEEEecCC--------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhhcc-CCCcEEEE
Confidence 986 999999998642 14899999999999999999999999998888888899866655555 55566665
Q ss_pred -cCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc------CCCccEEEECCCCccceee
Q 025278 158 -GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGKMCISIV 230 (255)
Q Consensus 158 -ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~~~~d~vid~~G~~~~~~~ 230 (255)
+++|++|++++|+|+.+ |+++++++++++|+++++++|+++++++...++.+. .+++|++||++|+.... .
T Consensus 150 ~~g~g~vG~~a~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~-~ 227 (324)
T cd08291 150 TAAASALGRMLVRLCKAD-GIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTG-Q 227 (324)
T ss_pred ccCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHH-H
Confidence 77999999999999996 999999999999999999999999999876554321 24799999999976543 3
Q ss_pred eeeccccCCceEEEEeeccC
Q 025278 231 YQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 231 ~~~~~~~~~G~~v~~G~~~~ 250 (255)
....++ ++|+++.+|..++
T Consensus 228 ~~~~l~-~~G~~v~~g~~~~ 246 (324)
T cd08291 228 ILLAMP-YGSTLYVYGYLSG 246 (324)
T ss_pred HHHhhC-CCCEEEEEEecCC
Confidence 455566 7899999997654
No 26
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.8e-37 Score=269.38 Aligned_cols=243 Identities=24% Similarity=0.333 Sum_probs=194.9
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
||+.+...+.. ..+++. +.+.|+|+++||+||+.++|||++|++.+.|.++ ...+|.++|||++|+|+++|+++++
T Consensus 6 ~a~~~~~~~~~-~~l~~~-~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~--~~~~p~i~GhE~aG~Vv~vG~~v~~ 81 (375)
T PLN02178 6 KAFGWAANDES-GVLSPF-HFSRRENGENDVTVKILFCGVCHSDLHTIKNHWG--FSRYPIIPGHEIVGIATKVGKNVTK 81 (375)
T ss_pred eeEEEEEccCC-CCceEE-eecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCC--CCCCCcccCceeeEEEEEECCCCCc
Confidence 44555544544 446777 7888999999999999999999999999988653 2346889999999999999999999
Q ss_pred CCCCCEEEec-----cCccc----------c-----------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchh
Q 025278 82 FKVGDEVYGD-----INEKA----------L-----------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA 135 (255)
Q Consensus 82 ~~~Gd~V~~~-----~~~~~----------~-----------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~ 135 (255)
+++||||... |..+. . .+...+|+|+||+++|.+.++++|+++++++++.++++
T Consensus 82 ~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~ 161 (375)
T PLN02178 82 FKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCA 161 (375)
T ss_pred cCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhcc
Confidence 9999999742 21100 0 01223689999999999999999999999999999999
Q ss_pred HHHHHHHHHhcc--cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhh-HHHHHHcCCCEEEcCCCc-ccccc
Q 025278 136 TETAYEGLERSA--FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTKE-NIEDL 211 (255)
Q Consensus 136 ~~ta~~~l~~~~--~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~~~~~g~~~v~~~~~~-~~~~~ 211 (255)
..|+|+++.... .++|++|+|.| +|++|++++|+|+.+ |+++++++.++++ .++++++|+++++++.+. ...+.
T Consensus 162 ~~ta~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~ 239 (375)
T PLN02178 162 GITVYSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAF-GLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEA 239 (375)
T ss_pred chHHHHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHc-CCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHh
Confidence 999999986543 46899999998 799999999999996 8999988876554 678889999999987542 12222
Q ss_pred CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccCC
Q 025278 212 PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQE 251 (255)
Q Consensus 212 ~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~~ 251 (255)
..++|++|||+|.......+.++++ ++|+++.+|...++
T Consensus 240 ~~~~D~vid~~G~~~~~~~~~~~l~-~~G~iv~vG~~~~~ 278 (375)
T PLN02178 240 VGTMDFIIDTVSAEHALLPLFSLLK-VSGKLVALGLPEKP 278 (375)
T ss_pred hCCCcEEEECCCcHHHHHHHHHhhc-CCCEEEEEccCCCC
Confidence 3479999999998766677778887 78999999987543
No 27
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=3.3e-37 Score=266.70 Aligned_cols=239 Identities=24% Similarity=0.356 Sum_probs=195.3
Q ss_pred CeEEEEcccCCCccceEEeecccCCCC-CCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~-~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|||+++++++. ++++ +.|.|+| .++||+||+.++++|++|+..+.... ...+|.++|||++|+|+++|+++
T Consensus 1 Mka~~~~~~~~----~~~~-~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~---~~~~p~i~G~e~~G~V~~vG~~v 72 (347)
T PRK10309 1 MKSVVNDTDGI----VRVA-ESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG---AHYYPITLGHEFSGYVEAVGSGV 72 (347)
T ss_pred CceEEEeCCCc----eEEE-ECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC---CCCCCcccccceEEEEEEeCCCC
Confidence 99999998775 4888 8999987 59999999999999999997543211 12357899999999999999999
Q ss_pred CCCCCCCEEEeccCccc------------------cCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHH
Q 025278 80 KKFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 141 (255)
+++++||||+..+...+ ..+....|+|+||+.++.+.++++|+++++++++.+. ++.++|+
T Consensus 73 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~ 151 (347)
T PRK10309 73 DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH 151 (347)
T ss_pred CCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence 99999999988642111 0112246999999999999999999999998888763 3445888
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCccccc---c--CCCc
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED---L--PEKF 215 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~--~~~~ 215 (255)
+++...+++|++|+|+| +|++|++++|+|+.+ |++ +++++++++|++.++++|+++++++++.+..+ . ..++
T Consensus 152 ~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~ 229 (347)
T PRK10309 152 AFHLAQGCEGKNVIIIG-AGTIGLLAIQCAVAL-GAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRF 229 (347)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCC
Confidence 88778889999999998 799999999999996 887 67888999999999999999999876543221 1 2368
Q ss_pred c-EEEECCCCccceeeeeeccccCCceEEEEeeccCC
Q 025278 216 D-VVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQE 251 (255)
Q Consensus 216 d-~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~~ 251 (255)
| ++|||+|.......++++++ ++|+++++|.+.++
T Consensus 230 d~~v~d~~G~~~~~~~~~~~l~-~~G~iv~~G~~~~~ 265 (347)
T PRK10309 230 DQLILETAGVPQTVELAIEIAG-PRAQLALVGTLHHD 265 (347)
T ss_pred CeEEEECCCCHHHHHHHHHHhh-cCCEEEEEccCCCC
Confidence 8 99999998777777888888 89999999987653
No 28
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.9e-36 Score=259.19 Aligned_cols=235 Identities=25% Similarity=0.346 Sum_probs=203.7
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++++++++.+.++++ +.|.|.+.++||+||+.++++|++|+..+.|.++. ....|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~-~~~~p~~~G~e~~G~V~~~G~~v~ 78 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY-KPELPAIGGSEAVGVVDAVGEGVK 78 (324)
T ss_pred CeeEEEccCCChhHeEEEe-ecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCCCCCcceEEEEEEeCCCCC
Confidence 9999999887643457888 89999999999999999999999999999887642 234578999999999999999999
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHhcccCCCCEEEEEcCC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA 160 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ga~ 160 (255)
++++||+|++.. ..|+|++|+.++...++++|+++++++++.+++...++|++++..++++|++|+|+|++
T Consensus 79 ~~~~Gd~V~~~~---------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~ 149 (324)
T cd08292 79 GLQVGQRVAVAP---------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAG 149 (324)
T ss_pred CCCCCCEEEecc---------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccc
Confidence 999999999864 25899999999999999999999999999988888899999877889999999999989
Q ss_pred chHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c--CCCccEEEECCCCccceeeeeec
Q 025278 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGKMCISIVYQKC 234 (255)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~--~~~~d~vid~~G~~~~~~~~~~~ 234 (255)
|.+|++++++|+++ |+++++++.++++.+.++++|+++++++.+.++.+ . .+++|++||++|+.. ...+.++
T Consensus 150 g~ig~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~ 227 (324)
T cd08292 150 GAVGKLVAMLAAAR-GINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKL-AGELLSL 227 (324)
T ss_pred cHHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHh
Confidence 99999999999996 99999999999999988889999999887654432 1 247999999999864 4555677
Q ss_pred cccCCceEEEEeecc
Q 025278 235 DKFQEKSLINFGLFR 249 (255)
Q Consensus 235 ~~~~~G~~v~~G~~~ 249 (255)
++ .+|+++.+|...
T Consensus 228 l~-~~g~~v~~g~~~ 241 (324)
T cd08292 228 LG-EGGTLVSFGSMS 241 (324)
T ss_pred hc-CCcEEEEEecCC
Confidence 76 789999999753
No 29
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=6.9e-37 Score=264.94 Aligned_cols=238 Identities=22% Similarity=0.370 Sum_probs=197.3
Q ss_pred EEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCCCC
Q 025278 4 WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83 (255)
Q Consensus 4 ~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~ 83 (255)
++++++++. ++++ +.|.|+|+++||+||+.++++|++|++.+.+.+. ....+|.++|||++|+|+++|+++..+
T Consensus 2 ~~~~~~g~~---~~~~-~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~-~~~~~p~i~GhE~~G~V~~vG~~v~~~- 75 (349)
T TIGR03201 2 WMMTEPGKP---MVKT-RVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR-TNHALPLALGHEISGRVIQAGAGAASW- 75 (349)
T ss_pred ceEecCCCC---ceEE-eccCCCCCCCeEEEEEEEEeecccchHHHcCCCC-ccCCCCeeccccceEEEEEeCCCcCCC-
Confidence 567777764 5888 8999999999999999999999999998754322 123568899999999999999999877
Q ss_pred CCCEEEeccCccc------------------cCCCCCCcceeeEEeeeCCceEeCCC------CCCHHhhhccchhHHHH
Q 025278 84 VGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPK------NLSFVEAASLPLATETA 139 (255)
Q Consensus 84 ~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~lp~------~~~~~~aa~l~~~~~ta 139 (255)
+||||+..+...+ ..+....|+|+||+++|.+.++++|+ ++++++++.+++++.++
T Consensus 76 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta 155 (349)
T TIGR03201 76 IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP 155 (349)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHH
Confidence 9999987422110 11222469999999999999999999 89998888889999999
Q ss_pred HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcc---ccc----c-
Q 025278 140 YEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IED----L- 211 (255)
Q Consensus 140 ~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~----~- 211 (255)
|+++....+++|++|+|+|+ |++|++++|+|+++ |+++++++++++|+++++++|+++++++.+.+ +.+ .
T Consensus 156 ~~a~~~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~-G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t 233 (349)
T TIGR03201 156 YQAAVQAGLKKGDLVIVIGA-GGVGGYMVQTAKAM-GAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA 233 (349)
T ss_pred HHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc
Confidence 99998888999999999996 99999999999996 88999999999999999999999999876542 211 1
Q ss_pred -CCCcc----EEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 212 -PEKFD----VVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 212 -~~~~d----~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
..++| ++|||+|+......+.++++ ++|+++++|...+
T Consensus 234 ~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~-~~G~iv~~G~~~~ 276 (349)
T TIGR03201 234 KARGLRSTGWKIFECSGSKPGQESALSLLS-HGGTLVVVGYTMA 276 (349)
T ss_pred ccCCCCCCcCEEEECCCChHHHHHHHHHHh-cCCeEEEECcCCC
Confidence 13565 89999998877767778887 7899999998764
No 30
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.2e-36 Score=264.12 Aligned_cols=241 Identities=26% Similarity=0.358 Sum_probs=198.8
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|+|+++.++++. ++++ +++.|+|+++||+||+.+++||++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 10 ~~~~~~~~~~~~---~~~~-~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~--~~~p~i~G~E~~G~Vv~vG~~v~ 83 (357)
T PLN02514 10 TTGWAARDPSGH---LSPY-TYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM--SNYPMVPGHEVVGEVVEVGSDVS 83 (357)
T ss_pred EEEEEEecCCCC---ceEE-eecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc--CCCCccCCceeeEEEEEECCCcc
Confidence 579999999876 6888 79999999999999999999999999999886532 34688999999999999999999
Q ss_pred CCCCCCEEEec-----cCccc----------c-----------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccch
Q 025278 81 KFKVGDEVYGD-----INEKA----------L-----------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL 134 (255)
Q Consensus 81 ~~~~Gd~V~~~-----~~~~~----------~-----------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~ 134 (255)
++++||+|+.. |..+. . .+....|+|+||+++|...++++|+++++++++.+++
T Consensus 84 ~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~ 163 (357)
T PLN02514 84 KFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLC 163 (357)
T ss_pred cccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhh
Confidence 99999999742 11100 0 0112369999999999999999999999999999999
Q ss_pred hHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCEEEcCCCcc-cccc
Q 025278 135 ATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKEN-IEDL 211 (255)
Q Consensus 135 ~~~ta~~~l~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~v~~~~~~~-~~~~ 211 (255)
++.|||+++.. ...++|++|+|+| +|++|++++|+|+.+ |+++++++.+++++..+ +++|++.++++.+.. +.+.
T Consensus 164 ~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~-G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~ 241 (357)
T PLN02514 164 AGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAM-GHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEA 241 (357)
T ss_pred hHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHh
Confidence 99999999965 4457999999997 799999999999996 88999888888777555 679999887764422 2223
Q ss_pred CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 212 PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 212 ~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
..++|++|||+|.......+.++++ ++|+++.+|...+
T Consensus 242 ~~~~D~vid~~g~~~~~~~~~~~l~-~~G~iv~~G~~~~ 279 (357)
T PLN02514 242 ADSLDYIIDTVPVFHPLEPYLSLLK-LDGKLILMGVINT 279 (357)
T ss_pred cCCCcEEEECCCchHHHHHHHHHhc-cCCEEEEECCCCC
Confidence 3579999999997766667788887 7899999998754
No 31
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=6.6e-37 Score=245.62 Aligned_cols=236 Identities=29% Similarity=0.435 Sum_probs=206.2
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
|+++|.++|++.++++++ ++++|+....+|+||.+++.||++|++.++|.||. ++++|.+-|.|++|+|+.+|+++++
T Consensus 21 kalvY~~hgdP~kVlql~-~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpv-rP~~PAVgGnEGv~eVv~vGs~vkg 98 (354)
T KOG0025|consen 21 KALVYSEHGDPAKVLQLK-NLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPV-RPELPAVGGNEGVGEVVAVGSNVKG 98 (354)
T ss_pred ceeeecccCCchhhheee-cccCCCCCCCceeeeeeecCCChHHhhhhccccCC-CCCCCcccCCcceEEEEEecCCcCc
Confidence 799999999999999999 89999888888999999999999999999999984 4677999999999999999999999
Q ss_pred CCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcCC
Q 025278 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGA 160 (255)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga~ 160 (255)
|++||+|+.... ..|+|++|.+.+++.++++++.++++.||.+..+.+|||..|. ..++++||+|+-.||.
T Consensus 99 fk~Gd~VIp~~a--------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNgan 170 (354)
T KOG0025|consen 99 FKPGDWVIPLSA--------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGAN 170 (354)
T ss_pred cCCCCeEeecCC--------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcc
Confidence 999999998763 4699999999999999999999999999999999999999995 5789999999999999
Q ss_pred chHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCEEEcCCCccccc------cCCCccEEEECCCCccceee
Q 025278 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLAIDYTKENIED------LPEKFDVVFDAVGKMCISIV 230 (255)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~------~~~~~d~vid~~G~~~~~~~ 230 (255)
+++|++.+|+|+++ |.+.+-++|+....+.+ +.+||++||...+..-.+ ....+.+.|||+|+..+...
T Consensus 171 S~VG~~ViQlaka~-GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~i 249 (354)
T KOG0025|consen 171 SGVGQAVIQLAKAL-GIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEI 249 (354)
T ss_pred cHHHHHHHHHHHHh-CcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHH
Confidence 99999999999996 99999998877665544 679999998653322111 13468999999999887665
Q ss_pred eeeccccCCceEEEEeeccC
Q 025278 231 YQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 231 ~~~~~~~~~G~~v~~G~~~~ 250 (255)
+.. +. .+|+++.||.++.
T Consensus 250 ar~-L~-~GgtmvTYGGMSk 267 (354)
T KOG0025|consen 250 ARY-LE-RGGTMVTYGGMSK 267 (354)
T ss_pred HHH-Hh-cCceEEEecCccC
Confidence 544 43 6899999999986
No 32
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2.9e-36 Score=261.18 Aligned_cols=241 Identities=29% Similarity=0.401 Sum_probs=198.2
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCC-C--CC------CCCCCCcccccceEEE
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA-F--SA------TDSPLPTIPGYDVAGV 71 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~-~--~~------~~~~~p~~~G~e~~G~ 71 (255)
|||+++.++++ ++++ +++.|+|.++||+||+.++++|++|+..+.+. + +. ....+|.++|||++|+
T Consensus 1 mka~~~~~~~~----l~~~-~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~ 75 (351)
T cd08233 1 MKAARYHGRKD----IRVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGV 75 (351)
T ss_pred CceEEEecCCc----eEEE-eccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEE
Confidence 99999998765 4888 89999999999999999999999999876542 1 10 1123688999999999
Q ss_pred EEEeCCCCCCCCCCCEEEeccCcccc------------------CCC-CCCcceeeEEeeeCCceEeCCCCCCHHhhhcc
Q 025278 72 VEKVGSQVKKFKVGDEVYGDINEKAL------------------DHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASL 132 (255)
Q Consensus 72 V~~~G~~v~~~~~Gd~V~~~~~~~~~------------------~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l 132 (255)
|+++|++++++++||+|+......+. .+. ...|+|++|+.++...++++|++++.++++.+
T Consensus 76 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~ 155 (351)
T cd08233 76 VVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV 155 (351)
T ss_pred EEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc
Confidence 99999999999999999874321110 001 12689999999999999999999999888765
Q ss_pred chhHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCCcccccc
Q 025278 133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL 211 (255)
Q Consensus 133 ~~~~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 211 (255)
.+..|||+++...++++|++|+|+| +|++|++++|+|+.+ |+ +++++++++++.++++++|++.++++.+.++.+.
T Consensus 156 -~~~~ta~~~l~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~-G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~ 232 (351)
T cd08233 156 -EPLAVAWHAVRRSGFKPGDTALVLG-AGPIGLLTILALKAA-GASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAE 232 (351)
T ss_pred -cHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHH
Confidence 5777899999878899999999998 699999999999996 88 7888899999999999999999999876654321
Q ss_pred ------CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 212 ------PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 212 ------~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
.+++|++||++|.......+.+.++ .+|+++.+|..+.
T Consensus 233 l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 276 (351)
T cd08233 233 VRKLTGGGGVDVSFDCAGVQATLDTAIDALR-PRGTAVNVAIWEK 276 (351)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHhcc-CCCEEEEEccCCC
Confidence 2369999999997666666677777 7899999998763
No 33
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=6.8e-36 Score=257.14 Aligned_cols=241 Identities=29% Similarity=0.376 Sum_probs=203.7
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++++++.. ++++ +.|.|++.++||+||+.++++|++|+..+.|.++. ...|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~p~~~g~e~~G~v~~vG~~v~ 74 (333)
T cd08296 1 YKAVQVTEPGGP---LELV-ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG--LSYPRVPGHEVVGRIDAVGEGVS 74 (333)
T ss_pred CeEEEEccCCCC---ceEE-eccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC--CCCCcccCcceeEEEEEECCCCc
Confidence 999999988543 5888 89999999999999999999999999999887642 35588999999999999999999
Q ss_pred CCCCCCEEEeccC-----cc--------------ccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHH
Q 025278 81 KFKVGDEVYGDIN-----EK--------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (255)
Q Consensus 81 ~~~~Gd~V~~~~~-----~~--------------~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 141 (255)
++++||+|+..+. .+ ...+....|+|++|+.++...++++|+++++++++.++++..++|+
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 154 (333)
T cd08296 75 RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN 154 (333)
T ss_pred cCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence 9999999986321 00 0011223589999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc---CCCccEE
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---PEKFDVV 218 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d~v 218 (255)
+++...++++++|+|+| +|++|++++++|+++ |.++++++++++++++++++|+++++++...++.+. .+++|++
T Consensus 155 ~~~~~~~~~~~~vlV~g-~g~iG~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~v 232 (333)
T cd08296 155 ALRNSGAKPGDLVAVQG-IGGLGHLAVQYAAKM-GFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLI 232 (333)
T ss_pred HHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEE
Confidence 99777899999999999 899999999999996 999999999999999999999999998876543321 2479999
Q ss_pred EECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 219 FDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 219 id~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
||++|.......+.+.++ .+|+++.+|....
T Consensus 233 i~~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 263 (333)
T cd08296 233 LATAPNAKAISALVGGLA-PRGKLLILGAAGE 263 (333)
T ss_pred EECCCchHHHHHHHHHcc-cCCEEEEEecCCC
Confidence 999986666666677777 7899999998653
No 34
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=2.2e-35 Score=257.58 Aligned_cols=241 Identities=25% Similarity=0.317 Sum_probs=199.0
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
||++++..+++. ++++ +.|.|+|.++||+||+.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++
T Consensus 8 ~~a~~~~~~~~~---~~l~-~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~---~~~p~v~G~e~~G~V~~vG~~v~ 80 (373)
T cd08299 8 CKAAVLWEPKKP---FSIE-EIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV---TPFPVILGHEAAGIVESVGEGVT 80 (373)
T ss_pred eEEEEEecCCCC---cEEE-EeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC---CCCCccccccceEEEEEeCCCCc
Confidence 788888876654 6888 8999999999999999999999999999988752 35688999999999999999999
Q ss_pred CCCCCCEEEeccCc--------------cccC-------------------------CCCCCcceeeEEeeeCCceEeCC
Q 025278 81 KFKVGDEVYGDINE--------------KALD-------------------------HPKRNGSLAEYTAVEENLLALKP 121 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~--------------~~~~-------------------------~~~~~g~~~~~~~~~~~~~~~lp 121 (255)
.+++||+|+..+.. .+.. +....|+|+||++++.+.++++|
T Consensus 81 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP 160 (373)
T cd08299 81 TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKID 160 (373)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCC
Confidence 99999999876210 0000 00025899999999999999999
Q ss_pred CCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCE
Q 025278 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL 199 (255)
Q Consensus 122 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~ 199 (255)
+++++++++.+++++.++|+++ ...++++|++|+|+| +|++|++++++|+++ |+ +|++++++++|++.++++|+++
T Consensus 161 ~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~a~~lGa~~ 238 (373)
T cd08299 161 AAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAA-GASRIIAVDINKDKFAKAKELGATE 238 (373)
T ss_pred CCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCce
Confidence 9999999999999999999987 568899999999997 799999999999996 87 7999999999999999999999
Q ss_pred EEcCCCcc--ccc-----cCCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 200 AIDYTKEN--IED-----LPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 200 v~~~~~~~--~~~-----~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+++..+.+ +.+ ..+++|++|||+|+......+....+..+|+++.+|....
T Consensus 239 ~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~ 296 (373)
T cd08299 239 CINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS 296 (373)
T ss_pred EecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCC
Confidence 99875432 211 1247999999999866555555544325799999997653
No 35
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.9e-35 Score=254.15 Aligned_cols=240 Identities=27% Similarity=0.352 Sum_probs=202.0
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++.++++. +++ +.+.|++.++||+||+.++++|++|++.+.+.++. ...|.++|||++|+|+++|++++
T Consensus 1 mka~~~~~~~~~----~l~-~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~--~~~~~~~G~e~~G~V~~vG~~v~ 73 (351)
T cd08285 1 MKAFAMLGIGKV----GWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG--ERHGMILGHEAVGVVEEVGSEVK 73 (351)
T ss_pred CceEEEccCCcc----EEE-ECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC--CCCCcccCcceEEEEEEecCCcC
Confidence 999999998865 787 78889999999999999999999999988876532 35588999999999999999999
Q ss_pred CCCCCCEEEeccCccc---------------------cCCCCCCcceeeEEeeeCC--ceEeCCCCCCHHhhhccchhHH
Q 025278 81 KFKVGDEVYGDINEKA---------------------LDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATE 137 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~---------------------~~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ 137 (255)
++++||+|++.+...+ ..+....|+|+||++++.+ .++++|+++++++++.++..+.
T Consensus 74 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ 153 (351)
T cd08285 74 DFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS 153 (351)
T ss_pred ccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchh
Confidence 9999999997431000 0011236899999999974 8999999999999999988999
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c-
Q 025278 138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L- 211 (255)
Q Consensus 138 ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~- 211 (255)
|+|++++...+++|++|+|+| +|++|++++|+|+.+ |. .+++++++++|.+.++++|+++++++.+.++.+ .
T Consensus 154 ta~~~~~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~ 231 (351)
T cd08285 154 TGFHGAELANIKLGDTVAVFG-IGPVGLMAVAGARLR-GAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLT 231 (351)
T ss_pred hHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHh
Confidence 999998888899999999997 799999999999996 77 477888999999999999999999886654322 1
Q ss_pred -CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 212 -PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 212 -~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
.+++|++||++|+......+.++++ ++|+++.+|....
T Consensus 232 ~~~~~d~vld~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 270 (351)
T cd08285 232 GGKGVDAVIIAGGGQDTFEQALKVLK-PGGTISNVNYYGE 270 (351)
T ss_pred CCCCCcEEEECCCCHHHHHHHHHHhh-cCCEEEEecccCC
Confidence 2479999999998766667777777 7899999998764
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=1.7e-35 Score=261.39 Aligned_cols=241 Identities=26% Similarity=0.340 Sum_probs=187.0
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHH-cCCCCC----CCCCCCcccccceEEEEEEe
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSA----TDSPLPTIPGYDVAGVVEKV 75 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~-~g~~~~----~~~~~p~~~G~e~~G~V~~~ 75 (255)
|||+++.++++ ++++ +.|.|+|+++||+||+.++|||++|++.+ .|..+. ...++|.++|||++|+|+++
T Consensus 3 ~~a~~~~~~~~----l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~v 77 (410)
T cd08238 3 TKAWRMYGKGD----LRLE-KFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKV 77 (410)
T ss_pred cEEEEEEcCCc----eEEE-ecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEe
Confidence 78999988775 4888 89999999999999999999999999976 454211 11246889999999999999
Q ss_pred CCCCC-CCCCCCEEEeccCcccc-------CCCCCCcceeeEEeeeCC----ceEeCCCCCCHHhhhcc-chhH-HHHHH
Q 025278 76 GSQVK-KFKVGDEVYGDINEKAL-------DHPKRNGSLAEYTAVEEN----LLALKPKNLSFVEAASL-PLAT-ETAYE 141 (255)
Q Consensus 76 G~~v~-~~~~Gd~V~~~~~~~~~-------~~~~~~g~~~~~~~~~~~----~~~~lp~~~~~~~aa~l-~~~~-~ta~~ 141 (255)
|++++ ++++||||+..+...+. .+...+|+|+||++++.+ .++++|+++++++++.+ ++++ .++++
T Consensus 78 G~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~ 157 (410)
T cd08238 78 GKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYT 157 (410)
T ss_pred CCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhh
Confidence 99998 69999999886432111 122346999999999987 68999999999888765 4332 12343
Q ss_pred HH---------HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-C-CcEEEEecChhhHHHHHHc--------CCC-EEE
Q 025278 142 GL---------ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-G-ASKVAATSSTAKLDLLRSL--------GAD-LAI 201 (255)
Q Consensus 142 ~l---------~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~-g-~~vi~~~~~~~~~~~~~~~--------g~~-~v~ 201 (255)
++ ++.++++|++|+|+|++|++|++++|+|++++ | .+|++++++++|++.++++ |++ .++
T Consensus 158 a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i 237 (410)
T cd08238 158 ANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYV 237 (410)
T ss_pred hcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEE
Confidence 32 34678999999999989999999999999862 2 3799999999999999987 766 567
Q ss_pred cCCC-ccccc----c--CCCccEEEECCCCccceeeeeeccccCCceEEEEee
Q 025278 202 DYTK-ENIED----L--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGL 247 (255)
Q Consensus 202 ~~~~-~~~~~----~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~ 247 (255)
++.+ .++.+ . .+++|++||++|.......+.++++ ++|+++.++.
T Consensus 238 ~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~-~~G~~v~~~g 289 (410)
T cd08238 238 NPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLA-PDGCLNFFAG 289 (410)
T ss_pred CCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhc-cCCeEEEEEc
Confidence 7653 23222 1 2479999999998777777788887 6788877654
No 37
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=5.7e-35 Score=254.01 Aligned_cols=239 Identities=28% Similarity=0.357 Sum_probs=198.5
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
||+++.++++. ++++ +.+.|+|.++||+||+.++++|++|+....|.++. ..+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~---l~~~-~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~ 75 (361)
T cd08231 2 RAAVLTGPGKP---LEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR--VPLPIILGHEGVGRVVALGGGVTT 75 (361)
T ss_pred eEEEEcCCCCC---CEEE-eccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC--CCCCcccccCCceEEEEeCCCccc
Confidence 89999998844 6888 89999999999999999999999999999887642 456889999999999999999986
Q ss_pred ------CCCCCEEEeccCccc------------------cCC-------CCCCcceeeEEeeeCC-ceEeCCCCCCHHhh
Q 025278 82 ------FKVGDEVYGDINEKA------------------LDH-------PKRNGSLAEYTAVEEN-LLALKPKNLSFVEA 129 (255)
Q Consensus 82 ------~~~Gd~V~~~~~~~~------------------~~~-------~~~~g~~~~~~~~~~~-~~~~lp~~~~~~~a 129 (255)
+++||+|+......+ ..+ ....|+|+||+.++.+ .++++|++++.+.+
T Consensus 76 ~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~a 155 (361)
T cd08231 76 DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVA 155 (361)
T ss_pred cccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHH
Confidence 999999988632100 000 1135899999999986 79999999998888
Q ss_pred hccchhHHHHHHHHHhc-ccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCCcc
Q 025278 130 ASLPLATETAYEGLERS-AFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKEN 207 (255)
Q Consensus 130 a~l~~~~~ta~~~l~~~-~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~ 207 (255)
+.++++++|||+++... ..++|++|||+| +|++|++++++|+.+ |+ ++++++++++|.++++++|++.++++++.+
T Consensus 156 a~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 233 (361)
T cd08231 156 APANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLA-GARRVIVIDGSPERLELAREFGADATIDIDELP 233 (361)
T ss_pred HHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccc
Confidence 88889999999999654 455999999998 799999999999996 88 899999999999999999999998876543
Q ss_pred cc-------cc--CCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 208 IE-------DL--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 208 ~~-------~~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
.. +. .+++|++||++|+......+.+.++ .+|+++.+|...
T Consensus 234 ~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~ 283 (361)
T cd08231 234 DPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLR-RGGTYVLVGSVA 283 (361)
T ss_pred cHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhc-cCCEEEEEcCCC
Confidence 22 11 2479999999997655556667776 789999999764
No 38
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.3e-35 Score=253.32 Aligned_cols=240 Identities=22% Similarity=0.265 Sum_probs=196.5
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++++++. ++++ +.+.|+|.++|++||+.++++|++|++.+.|.++. .++|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~----~~~~-~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~ 73 (339)
T PRK10083 1 MKSIVIEKPNS----LAIE-ERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF--AKYPRVIGHEFFGVIDAVGEGVD 73 (339)
T ss_pred CeEEEEecCCe----eEEE-eccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc--CCCCcccccceEEEEEEECCCCc
Confidence 99999998775 4888 89999999999999999999999999999887642 25689999999999999999999
Q ss_pred CCCCCCEEEeccCcccc------C------------CCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 81 KFKVGDEVYGDINEKAL------D------------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~------~------------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
.+++||+|+..+...+. . +....|+|+||+.++...++++|++++++.++ +..++.++|++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~ 152 (339)
T PRK10083 74 AARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV 152 (339)
T ss_pred cCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH
Confidence 99999999854221110 0 11235899999999999999999999987766 44567778876
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCccccccC----CCccE
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIEDLP----EKFDV 217 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~----~~~d~ 217 (255)
++..++++|++|+|+| +|++|++++|+|+.+.|++ +++++++++|.+.++++|++.++++.+.++.+.. .++|+
T Consensus 153 ~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~ 231 (339)
T PRK10083 153 TGRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTL 231 (339)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCE
Confidence 7788899999999999 8999999999999633775 6667889999999999999999988764433321 24679
Q ss_pred EEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 218 VFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 218 vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+||++|+......+.+.++ .+|+++.+|....
T Consensus 232 vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 263 (339)
T PRK10083 232 IIDAACHPSILEEAVTLAS-PAARIVLMGFSSE 263 (339)
T ss_pred EEECCCCHHHHHHHHHHhh-cCCEEEEEccCCC
Confidence 9999997666666777777 7899999998653
No 39
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.1e-34 Score=250.02 Aligned_cols=242 Identities=31% Similarity=0.400 Sum_probs=202.3
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCC-CCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|||++++++++. ++++ +.+.|++.++||+||+.++++|++|+....|.++. ....+|.++|||++|+|+++|+++
T Consensus 1 ~ka~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v 76 (340)
T cd05284 1 MKAARLYEYGKP---LRLE-DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGV 76 (340)
T ss_pred CeeeEeccCCCC---ceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCC
Confidence 899999988654 6787 78889999999999999999999999998887643 334568899999999999999999
Q ss_pred CCCCCCCEEEeccCcc------------------ccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHH
Q 025278 80 KKFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 141 (255)
..+++||+|++..... ...+....|+|++|+.++.+.++++|+++++++++.+++++.|||+
T Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~ 156 (340)
T cd05284 77 DGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYH 156 (340)
T ss_pred CcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence 9999999999864210 0112234689999999999999999999999999999999999999
Q ss_pred HHHh--cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c--CC
Q 025278 142 GLER--SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PE 213 (255)
Q Consensus 142 ~l~~--~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~--~~ 213 (255)
++.. ..+.++++|+|+| +|++|++++++|+.+++.+++++++++++.+.++++|+++++++++. +.+ . ..
T Consensus 157 ~l~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~~ 234 (340)
T cd05284 157 AVKKALPYLDPGSTVVVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGGR 234 (340)
T ss_pred HHHHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCCC
Confidence 9954 4688899999999 67799999999999733899999999999999999999999988764 222 1 23
Q ss_pred CccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 214 KFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 214 ~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
++|+++|++|+......+.++++ .+|+++.+|..+
T Consensus 235 ~~dvvld~~g~~~~~~~~~~~l~-~~g~~i~~g~~~ 269 (340)
T cd05284 235 GADAVIDFVGSDETLALAAKLLA-KGGRYVIVGYGG 269 (340)
T ss_pred CCCEEEEcCCCHHHHHHHHHHhh-cCCEEEEEcCCC
Confidence 79999999997555566677776 789999999765
No 40
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=7e-35 Score=251.86 Aligned_cols=220 Identities=27% Similarity=0.334 Sum_probs=179.8
Q ss_pred cceEEeecccCCCCC-CCeEEEEEeEeecChHhHHHHcCCCC-CCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEec
Q 025278 14 SVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD 91 (255)
Q Consensus 14 ~~l~~~~~~~~p~~~-~~eV~V~v~~~~i~~~D~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~ 91 (255)
+.++++ +.+.|+|. ++||+|||.++|||+.|......... ....++|.++|||++|+|+++|++++++++||||++.
T Consensus 21 ~~~~~~-~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 99 (345)
T cd08293 21 ENFRVE-ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF 99 (345)
T ss_pred cceEEE-eccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence 568888 89999874 99999999999999998643321110 0123467889999999999999999999999999874
Q ss_pred cCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHH----hhhccchhHHHHHHHH-HhcccCCC--CEEEEEcCCchHH
Q 025278 92 INEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFV----EAASLPLATETAYEGL-ERSAFSAG--KSILVLGGAGGVG 164 (255)
Q Consensus 92 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~----~aa~l~~~~~ta~~~l-~~~~~~~g--~~VlI~ga~g~~G 164 (255)
. ++|+||++++.+.++++|+++++. .++++++++.|||+++ +..++++| ++|+|+|++|++|
T Consensus 100 ~-----------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG 168 (345)
T cd08293 100 N-----------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACG 168 (345)
T ss_pred C-----------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHH
Confidence 2 579999999999999999986432 2456678899999998 45678776 9999999889999
Q ss_pred HHHHHHHHHhcCC-cEEEEecChhhHHHHHH-cCCCEEEcCCCcccccc-----CCCccEEEECCCCccceeeeeecccc
Q 025278 165 TMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LGADLAIDYTKENIEDL-----PEKFDVVFDAVGKMCISIVYQKCDKF 237 (255)
Q Consensus 165 ~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~-----~~~~d~vid~~G~~~~~~~~~~~~~~ 237 (255)
++++|+|+++ |+ +|++++++++|.+++++ +|+++++++.+.++.+. .+++|++||++|+.. ...+..+++
T Consensus 169 ~~aiqlAk~~-G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~- 245 (345)
T cd08293 169 SLAGQIGRLL-GCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMN- 245 (345)
T ss_pred HHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhc-
Confidence 9999999996 88 79999999999999876 99999999876554321 258999999999865 455677777
Q ss_pred CCceEEEEeec
Q 025278 238 QEKSLINFGLF 248 (255)
Q Consensus 238 ~~G~~v~~G~~ 248 (255)
++|+++.+|..
T Consensus 246 ~~G~iv~~G~~ 256 (345)
T cd08293 246 ENSHIILCGQI 256 (345)
T ss_pred cCCEEEEEeee
Confidence 79999999964
No 41
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.4e-34 Score=248.19 Aligned_cols=224 Identities=28% Similarity=0.373 Sum_probs=186.6
Q ss_pred CeEEEEccc--CCC-ccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCC
Q 025278 1 MKAWVYKEY--GNS-QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS 77 (255)
Q Consensus 1 mka~v~~~~--~~~-~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~ 77 (255)
||+|++..+ +.. .+.++++ +.+.|+|+++||+||+.+++||+.|...... ..+.|.++|+|++|+|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~a~~in~~~~~~~~~-----~~~~p~v~G~e~~G~V~~--- 73 (329)
T cd08294 3 AKTWVLKKHFDGKPKESDFELV-EEELPPLKDGEVLCEALFLSVDPYMRPYSKR-----LNEGDTMIGTQVAKVIES--- 73 (329)
T ss_pred ceEEEEecCCCCCCCccceEEE-ecCCCCCCCCcEEEEEEEEecCHHHhccccc-----CCCCCcEecceEEEEEec---
Confidence 899999984 332 2678999 8999999999999999999999887542211 124588999999999985
Q ss_pred CCCCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCC---ceEeCCCCCC-----HHhhhccchhHHHHHHHH-Hhccc
Q 025278 78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN---LLALKPKNLS-----FVEAASLPLATETAYEGL-ERSAF 148 (255)
Q Consensus 78 ~v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~lp~~~~-----~~~aa~l~~~~~ta~~~l-~~~~~ 148 (255)
.++++++||||+.. ++|++|++++.. .++++|++++ ....+.++++++|||+++ +..++
T Consensus 74 ~~~~~~~Gd~V~~~------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~ 141 (329)
T cd08294 74 KNSKFPVGTIVVAS------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKP 141 (329)
T ss_pred CCCCCCCCCEEEee------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCC
Confidence 45679999999973 479999999999 9999999987 233346788999999998 57889
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc-----CCCccEEEECCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVG 223 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-----~~~~d~vid~~G 223 (255)
++|++|+|+|++|++|++++|+|+.+ |++++++++++++.++++++|+++++++.+.++.+. .+++|++||++|
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~-G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g 220 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIK-GCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVG 220 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence 99999999999999999999999995 999999999999999999999999999876654321 357999999999
Q ss_pred CccceeeeeeccccCCceEEEEeec
Q 025278 224 KMCISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 224 ~~~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
+. ....+.++++ .+|+++.+|..
T Consensus 221 ~~-~~~~~~~~l~-~~G~iv~~g~~ 243 (329)
T cd08294 221 GE-FSSTVLSHMN-DFGRVAVCGSI 243 (329)
T ss_pred HH-HHHHHHHhhc-cCCEEEEEcch
Confidence 84 4455677777 78999999864
No 42
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=9e-35 Score=250.66 Aligned_cols=231 Identities=29% Similarity=0.380 Sum_probs=188.7
Q ss_pred CeEEEEcccCCCccceEEeecccC----CCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccce--EEEEEE
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEV----PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDV--AGVVEK 74 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~----p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~--~G~V~~ 74 (255)
||+|+...+. .++|+++ +.+. |+|+++||+|||++++||+.|+..+.|..+. ....|.++|++. .|.+..
T Consensus 8 ~~~~~~~~~~--~~~~~~~-~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~-~~~~p~~~g~~~~g~~~~~~ 83 (338)
T cd08295 8 LKAYVTGFPK--ESDLELR-TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS-LYLPPFKPGEVITGYGVAKV 83 (338)
T ss_pred EecCCCCCCC--ccceEEE-EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc-ccCCCcCCCCeEeccEEEEE
Confidence 4566644433 3678998 7876 8899999999999999999999998885321 124578889754 456656
Q ss_pred eCCCCCCCCCCCEEEeccCccccCCCCCCcceeeEEeeeC-CceEeCC-CCCCHH-hhhccchhHHHHHHHH-HhcccCC
Q 025278 75 VGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEE-NLLALKP-KNLSFV-EAASLPLATETAYEGL-ERSAFSA 150 (255)
Q Consensus 75 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~lp-~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~ 150 (255)
+|+.++.+++||+|++. |+|+||+++|. ..++++| +++++. +++.+++++.|||+++ +..++++
T Consensus 84 v~~~v~~~~vGd~V~~~------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~ 151 (338)
T cd08295 84 VDSGNPDFKVGDLVWGF------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKK 151 (338)
T ss_pred EecCCCCCCCCCEEEec------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCC
Confidence 78888899999999863 68999999999 7999995 678876 7888899999999999 4688999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH-cCCCEEEcCCCc-cccc----c-CCCccEEEECCC
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKE-NIED----L-PEKFDVVFDAVG 223 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~v~~~~~~-~~~~----~-~~~~d~vid~~G 223 (255)
|++|+|+|++|++|++++|+|+.+ |+++++++++++|.+++++ +|+++++++.+. ++.+ . .+++|++||++|
T Consensus 152 g~~VlI~Ga~G~vG~~aiqlAk~~-G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g 230 (338)
T cd08295 152 GETVFVSAASGAVGQLVGQLAKLK-GCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVG 230 (338)
T ss_pred CCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCC
Confidence 999999998899999999999995 9999999999999999988 999999997542 3322 1 258999999999
Q ss_pred CccceeeeeeccccCCceEEEEeeccC
Q 025278 224 KMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 224 ~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+. ....+.++++ ++|+++.+|..++
T Consensus 231 ~~-~~~~~~~~l~-~~G~iv~~G~~~~ 255 (338)
T cd08295 231 GK-MLDAVLLNMN-LHGRIAACGMISQ 255 (338)
T ss_pred HH-HHHHHHHHhc-cCcEEEEeccccc
Confidence 74 4556677777 7899999997654
No 43
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.9e-34 Score=247.50 Aligned_cols=244 Identities=32% Similarity=0.417 Sum_probs=198.4
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCC------------------CCCCCCc
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA------------------TDSPLPT 62 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~------------------~~~~~p~ 62 (255)
|||+++..++.. ..+++.++.+.|++.+++|+||+.++++|++|+..+.|.++. ....+|.
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (350)
T cd08274 1 MRAVLLTGHGGL-DKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR 79 (350)
T ss_pred CeEEEEeccCCc-cceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence 899999987765 456676345777889999999999999999999988876531 1345688
Q ss_pred ccccceEEEEEEeCCCCCCCCCCCEEEeccCccc----------cCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhcc
Q 025278 63 IPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKA----------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL 132 (255)
Q Consensus 63 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~----------~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l 132 (255)
++|||++|+|+++|++++++++||||++.+...+ ..+...+|+|++|+.++...++++|+++++.+++.+
T Consensus 80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l 159 (350)
T cd08274 80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF 159 (350)
T ss_pred ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence 9999999999999999999999999988532111 011223589999999999999999999999999999
Q ss_pred chhHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc--
Q 025278 133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-- 210 (255)
Q Consensus 133 ~~~~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-- 210 (255)
++++.|||++++...+++|++|+|+|++|++|++++++|+++ |+++++++.++ +++.++++|++.+++.......+
T Consensus 160 ~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~ 237 (350)
T cd08274 160 PCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRR-GAIVIAVAGAA-KEEAVRALGADTVILRDAPLLADAK 237 (350)
T ss_pred ccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHHHH
Confidence 999999999997788999999999998899999999999996 99998888665 88888999998766654433211
Q ss_pred --cCCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 211 --LPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 211 --~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
..+++|++||++|+. ....+.+.++ .+|+++.+|...
T Consensus 238 ~~~~~~~d~vi~~~g~~-~~~~~~~~l~-~~G~~v~~g~~~ 276 (350)
T cd08274 238 ALGGEPVDVVADVVGGP-LFPDLLRLLR-PGGRYVTAGAIA 276 (350)
T ss_pred hhCCCCCcEEEecCCHH-HHHHHHHHhc-cCCEEEEecccC
Confidence 134799999999975 3455567776 789999998653
No 44
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=2e-34 Score=250.96 Aligned_cols=238 Identities=28% Similarity=0.341 Sum_probs=200.2
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++++++.. ++++ +.+.|++.++||+||+.++++|++|++...|.++ ..+|.++|||++|+|+++|+++.
T Consensus 3 ~~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~---~~~p~v~G~e~~G~V~~vG~~v~ 75 (365)
T cd08278 3 TTAAVVREPGGP---FVLE-DVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP---TPLPAVLGHEGAGVVEAVGSAVT 75 (365)
T ss_pred cEEeeeccCCCc---ceEE-EeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC---CCCCcccccceeEEEEEeCCCcc
Confidence 899999987654 5777 7899999999999999999999999999988764 34578999999999999999999
Q ss_pred CCCCCCEEEeccCcc-------------cc-------CC--------------------CCCCcceeeEEeeeCCceEeC
Q 025278 81 KFKVGDEVYGDINEK-------------AL-------DH--------------------PKRNGSLAEYTAVEENLLALK 120 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~-------------~~-------~~--------------------~~~~g~~~~~~~~~~~~~~~l 120 (255)
++++||+|++....+ +. .+ ....|+|++|+.++...++++
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i 155 (365)
T cd08278 76 GLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV 155 (365)
T ss_pred cCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence 999999998632100 00 00 112489999999999999999
Q ss_pred CCCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCC
Q 025278 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD 198 (255)
Q Consensus 121 p~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~ 198 (255)
|+++++++++.+++++.|||+++ +...++++++|+|+| +|++|++++++|+++ |. .+++++++++|.+.++++|++
T Consensus 156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~-G~~~v~~~~~~~~k~~~~~~~g~~ 233 (365)
T cd08278 156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIA-GCTTIIAVDIVDSRLELAKELGAT 233 (365)
T ss_pred CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCc
Confidence 99999999999999999999987 567899999999997 799999999999996 88 477888999999999999999
Q ss_pred EEEcCCCccccc-----cCCCccEEEECCCCccceeeeeeccccCCceEEEEeec
Q 025278 199 LAIDYTKENIED-----LPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 199 ~v~~~~~~~~~~-----~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
.++++.+.++.+ ..+++|+++||+|+......+.+.++ .+|+++.+|..
T Consensus 234 ~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~-~~G~~v~~g~~ 287 (365)
T cd08278 234 HVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALA-PRGTLALVGAP 287 (365)
T ss_pred EEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhc-cCCEEEEeCcC
Confidence 999887654322 13579999999997766667777777 78999999975
No 45
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=2.4e-34 Score=247.49 Aligned_cols=234 Identities=34% Similarity=0.461 Sum_probs=198.3
Q ss_pred eEEEEccc---CCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCC
Q 025278 2 KAWVYKEY---GNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78 (255)
Q Consensus 2 ka~v~~~~---~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~ 78 (255)
|||++..+ +++ +.+++. +.|.|+|+++||+||+.++++|+.|...+.+..+ ....|.++|||++|+|+++|++
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~--~~~~~~~~g~e~~G~V~~vG~~ 76 (336)
T TIGR02817 1 KAVGYKKPLPITDP-DALVDI-DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP--EAGQPKILGWDAAGVVVAVGDE 76 (336)
T ss_pred CceeeccccCCCCc-ccceec-ccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC--CCCCCcccceeeEEEEEEeCCC
Confidence 68999987 666 778888 8999999999999999999999999998887653 2345788999999999999999
Q ss_pred CCCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHH-HhcccCC-----CC
Q 025278 79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSA-----GK 152 (255)
Q Consensus 79 v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~-----g~ 152 (255)
++++++||+|++... ....|+|++|++++.+.++++|+++++++++.++++++|||+++ ...++++ |+
T Consensus 77 v~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~ 150 (336)
T TIGR02817 77 VTLFKPGDEVWYAGD------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKR 150 (336)
T ss_pred CCCCCCCCEEEEcCC------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 999999999997531 11258999999999999999999999999999999999999998 5677776 99
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c-CCCccEEEECCCCccc
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L-PEKFDVVFDAVGKMCI 227 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~-~~~~d~vid~~G~~~~ 227 (255)
+|+|+|++|++|++++|+|+.++|++++++++++++.++++++|+++++++.. ++.+ . .+++|+++|++|+...
T Consensus 151 ~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~ 229 (336)
T TIGR02817 151 ALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQH 229 (336)
T ss_pred EEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHH
Confidence 99999999999999999999844899999999999999999999999998654 2221 1 2479999999876555
Q ss_pred eeeeeeccccCCceEEEEee
Q 025278 228 SIVYQKCDKFQEKSLINFGL 247 (255)
Q Consensus 228 ~~~~~~~~~~~~G~~v~~G~ 247 (255)
.....++++ .+|+++.++.
T Consensus 230 ~~~~~~~l~-~~G~~v~~~~ 248 (336)
T TIGR02817 230 FKEIVELLA-PQGRFALIDD 248 (336)
T ss_pred HHHHHHHhc-cCCEEEEEcc
Confidence 566677776 7899998764
No 46
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=5.1e-34 Score=246.05 Aligned_cols=237 Identities=27% Similarity=0.388 Sum_probs=199.5
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCC-CeEEEEEeEeecChHhHHHHcCCCCCCCC---CCCcccccceEEEEEEeC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLRE-DQVLIKVVAAALNPIDFKRMLGAFSATDS---PLPTIPGYDVAGVVEKVG 76 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~-~eV~V~v~~~~i~~~D~~~~~g~~~~~~~---~~p~~~G~e~~G~V~~~G 76 (255)
|||+++..++.+++.++++ +.|.|+|.+ +||+||+.++++|++|+..+.|.++.... ..|.++|||++|+|+++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG 79 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLE-SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVG 79 (341)
T ss_pred CceEEEccCCCchhheEEe-ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeC
Confidence 9999999998764567888 789998888 99999999999999999998887542211 157789999999999999
Q ss_pred CCCCCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEE
Q 025278 77 SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSIL 155 (255)
Q Consensus 77 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~Vl 155 (255)
+++..+++||+|++... ..|+|++|+.++...++++|+++++++++.++++++|+|+++. ...+++|++|+
T Consensus 80 ~~v~~~~~Gd~V~~~~~--------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl 151 (341)
T cd08290 80 SGVKSLKPGDWVIPLRP--------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVI 151 (341)
T ss_pred CCCCCCCCCCEEEecCC--------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEE
Confidence 99999999999998642 2589999999999999999999999999999999999999984 57789999999
Q ss_pred EEcCCchHHHHHHHHHHHhcCCcEEEEecCh----hhHHHHHHcCCCEEEcCCCc---cccc----c-CCCccEEEECCC
Q 025278 156 VLGGAGGVGTMVIQLAKHVFGASKVAATSST----AKLDLLRSLGADLAIDYTKE---NIED----L-PEKFDVVFDAVG 223 (255)
Q Consensus 156 I~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~----~~~~~~~~~g~~~v~~~~~~---~~~~----~-~~~~d~vid~~G 223 (255)
|+|++|++|++++++|+++ |.++++++.++ ++.++++++|+++++++... ++.. . .+++|++|||+|
T Consensus 152 I~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g 230 (341)
T cd08290 152 QNGANSAVGQAVIQLAKLL-GIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVG 230 (341)
T ss_pred EccchhHHHHHHHHHHHHc-CCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcC
Confidence 9998899999999999995 99999888765 67888889999999987653 3221 1 126999999999
Q ss_pred CccceeeeeeccccCCceEEEEeecc
Q 025278 224 KMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 224 ~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
+... ....++++ .+|+++.+|...
T Consensus 231 ~~~~-~~~~~~l~-~~G~~v~~g~~~ 254 (341)
T cd08290 231 GKSA-TELARLLS-PGGTMVTYGGMS 254 (341)
T ss_pred cHhH-HHHHHHhC-CCCEEEEEeccC
Confidence 7653 34566666 789999998654
No 47
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=8.7e-34 Score=244.30 Aligned_cols=241 Identities=24% Similarity=0.307 Sum_probs=199.4
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||++++++++. ..++ +.|.|++.++||+||+.++++|++|+..+.|.++. ..|.++|||++|+|+++|++++
T Consensus 1 mka~~~~~~~~~---~~~~-~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~~G~~v~ 73 (338)
T PRK09422 1 MKAAVVNKDHTG---DVVV-EKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD---KTGRILGHEGIGIVKEVGPGVT 73 (338)
T ss_pred CeEEEecCCCCC---ceEE-EecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC---CCCccCCcccceEEEEECCCCc
Confidence 999999998876 1277 78999999999999999999999999998887542 2367899999999999999999
Q ss_pred CCCCCCEEEeccCc-------------------cccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHH
Q 025278 81 KFKVGDEVYGDINE-------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~-------------------~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 141 (255)
.|++||+|++.+.- ....+....|+|+||+.++...++++|+++++.+++.++++..|||+
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~ 153 (338)
T PRK09422 74 SLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYK 153 (338)
T ss_pred cCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHH
Confidence 99999999863210 00012223689999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCC-cccc----ccCCCcc
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIE----DLPEKFD 216 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~----~~~~~~d 216 (255)
+++...+++|++|+|+| +|++|++++++|+.+.|.+++++++++++++.++++|++.++++.. .++. +..+++|
T Consensus 154 ~~~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d 232 (338)
T PRK09422 154 AIKVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAH 232 (338)
T ss_pred HHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCc
Confidence 99878899999999999 7999999999999734899999999999999999999999998753 2322 1234789
Q ss_pred EEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 217 VVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 217 ~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
.+|+++++......+.+.++ .+|+++.+|....
T Consensus 233 ~vi~~~~~~~~~~~~~~~l~-~~G~~v~~g~~~~ 265 (338)
T PRK09422 233 AAVVTAVAKAAFNQAVDAVR-AGGRVVAVGLPPE 265 (338)
T ss_pred EEEEeCCCHHHHHHHHHhcc-CCCEEEEEeeCCC
Confidence 66666666666667777777 7899999997643
No 48
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=8.7e-34 Score=245.62 Aligned_cols=241 Identities=23% Similarity=0.319 Sum_probs=195.1
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCC-------CCCCCCcccccceEEEEE
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-------TDSPLPTIPGYDVAGVVE 73 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~-------~~~~~p~~~G~e~~G~V~ 73 (255)
|||++++.+++. +++ +.+.|++.++||+||+.++++|+.|+..+.|.+.. ...+.|.++|||++|+|+
T Consensus 1 mka~~~~~~~~~----~~~-~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~ 75 (350)
T cd08256 1 MRAVVCHGPQDY----RLE-EVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVV 75 (350)
T ss_pred CeeEEEecCCce----EEE-ECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEE
Confidence 999999987754 888 89999999999999999999999999988875311 011457789999999999
Q ss_pred EeCCCCC--CCCCCCEEEeccCcccc------------------CCC--CCCcceeeEEeeeCC-ceEeCCCCCCHHhhh
Q 025278 74 KVGSQVK--KFKVGDEVYGDINEKAL------------------DHP--KRNGSLAEYTAVEEN-LLALKPKNLSFVEAA 130 (255)
Q Consensus 74 ~~G~~v~--~~~~Gd~V~~~~~~~~~------------------~~~--~~~g~~~~~~~~~~~-~~~~lp~~~~~~~aa 130 (255)
++|++++ ++++||+|++.+...+. .+. ...|+|++|+.++.+ .++++|+++++++++
T Consensus 76 ~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa 155 (350)
T cd08256 76 ELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAI 155 (350)
T ss_pred EeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHh
Confidence 9999998 89999999873211000 001 136899999999988 678999999998888
Q ss_pred ccchhHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCcccc
Q 025278 131 SLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (255)
Q Consensus 131 ~l~~~~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 209 (255)
.+ .++.++|++++..++++|++|+|.| +|++|++++++|+++ |++ +++++++++|.+.++++|++.++++...++.
T Consensus 156 ~~-~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 232 (350)
T cd08256 156 LI-EPLACALHAVDRANIKFDDVVVLAG-AGPLGLGMIGAARLK-NPKKLIVLDLKDERLALARKFGADVVLNPPEVDVV 232 (350)
T ss_pred hh-hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHH
Confidence 87 8888999998778899999999955 899999999999997 765 5677889999999999999999887654432
Q ss_pred c----c--CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 210 D----L--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 210 ~----~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+ . .+++|++||++|+......+.++++ .+|+++.+|.+..
T Consensus 233 ~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 278 (350)
T cd08256 233 EKIKELTGGYGCDIYIEATGHPSAVEQGLNMIR-KLGRFVEFSVFGD 278 (350)
T ss_pred HHHHHHhCCCCCCEEEECCCChHHHHHHHHHhh-cCCEEEEEccCCC
Confidence 2 1 2369999999997655566677777 7899999987654
No 49
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=9.5e-34 Score=243.00 Aligned_cols=235 Identities=30% Similarity=0.377 Sum_probs=202.7
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
||++++.+++.+ ..++++ +.+.|+|.++||+||+.++++|++|+....|.++. ..+|.++|||++|+|+.+|++++
T Consensus 2 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~vG~~v~ 77 (327)
T PRK10754 2 AKRIEFHKHGGP-EVLQAV-EFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP--PSLPSGLGTEAAGVVSKVGSGVK 77 (327)
T ss_pred ceEEEEeccCCh-hHeEEe-eccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC--CCCCCccCcceEEEEEEeCCCCC
Confidence 899999999887 788999 88999999999999999999999999988887642 34578899999999999999999
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga 159 (255)
.+++||+|+... ...|+|++|+.++.+.++++|+++++++++.+++...++|+++. ...+++|++|+|+|+
T Consensus 78 ~~~~Gd~V~~~~--------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~ 149 (327)
T PRK10754 78 HIKVGDRVVYAQ--------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA 149 (327)
T ss_pred CCCCCCEEEECC--------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeC
Confidence 999999998642 12589999999999999999999999999988889999999984 578999999999998
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc------CCCccEEEECCCCccceeeeee
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGKMCISIVYQK 233 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~~~~d~vid~~G~~~~~~~~~~ 233 (255)
+|.+|++++++|+.+ |++++.++++++++++++++|++++++....++.+. .+++|++|||+|+.. ......
T Consensus 150 ~g~ig~~~~~lak~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~ 227 (327)
T PRK10754 150 AGGVGLIACQWAKAL-GAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDT-WEASLD 227 (327)
T ss_pred CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHH
Confidence 999999999999995 999999999999999999999999988765544321 247999999999743 344566
Q ss_pred ccccCCceEEEEeeccC
Q 025278 234 CDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 234 ~~~~~~G~~v~~G~~~~ 250 (255)
.++ .+|+++.+|..+.
T Consensus 228 ~l~-~~g~~v~~g~~~~ 243 (327)
T PRK10754 228 CLQ-RRGLMVSFGNASG 243 (327)
T ss_pred Hhc-cCCEEEEEccCCC
Confidence 666 7899999997653
No 50
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.9e-33 Score=242.46 Aligned_cols=244 Identities=29% Similarity=0.409 Sum_probs=204.6
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++..++ . ..++++ +.+.|.|.++|++||+.++++|++|+..+.|.++.. ...|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~-~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~V~~vG~~~~ 76 (341)
T cd08297 1 MKAAVVEEFG-E-KPYEVK-DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK-PKLPLIGGHEGAGVVVAVGPGVS 76 (341)
T ss_pred CceEEeeccC-C-CCceEE-EeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC-CCCCccCCcccceEEEEeCCCCC
Confidence 9999999887 2 446888 789999999999999999999999999988876422 34567899999999999999999
Q ss_pred CCCCCCEEEeccC-----c--------------cccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHH
Q 025278 81 KFKVGDEVYGDIN-----E--------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (255)
Q Consensus 81 ~~~~Gd~V~~~~~-----~--------------~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 141 (255)
.+++||+|+..+. . ....+....|+|++|+.++.+.++++|+++++.+++.++....|||+
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~ 156 (341)
T cd08297 77 GLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYK 156 (341)
T ss_pred CCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHH
Confidence 9999999987421 0 00111223689999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c--CCCc
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKF 215 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~--~~~~ 215 (255)
++...+++++++|+|+|+.+.+|++++++|+++ |.+++++++++++.+.++++|++.++++.+.++.+ . .+++
T Consensus 157 ~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~v 235 (341)
T cd08297 157 ALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAM-GLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGA 235 (341)
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCC
Confidence 997778999999999998888999999999995 99999999999999999999999999887654322 1 3579
Q ss_pred cEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 216 DVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 216 d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
|++||+.++......+.+.++ .+|+++.+|....
T Consensus 236 d~vl~~~~~~~~~~~~~~~l~-~~g~~v~~g~~~~ 269 (341)
T cd08297 236 HAVVVTAVSAAAYEQALDYLR-PGGTLVCVGLPPG 269 (341)
T ss_pred CEEEEcCCchHHHHHHHHHhh-cCCEEEEecCCCC
Confidence 999998887666666677776 7899999997653
No 51
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=8.3e-34 Score=245.17 Aligned_cols=240 Identities=28% Similarity=0.343 Sum_probs=200.4
Q ss_pred CeEEEEcccCCCccceEEeecccCCCC-CCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~-~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|||+++.++++. ++. +.|.|+| .++||+||+.++++|++|++.+.|.++. .++|.++|||++|+|+++|+++
T Consensus 1 ~ka~~~~~~~~~----~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v 73 (347)
T cd05278 1 MKALVYLGPGKI----GLE-EVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG--AKHGMILGHEFVGEVVEVGSDV 73 (347)
T ss_pred CceEEEecCCce----EEE-EcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC--CCCCceeccceEEEEEEECCCc
Confidence 899999987764 788 7898989 9999999999999999999999887753 4568899999999999999999
Q ss_pred CCCCCCCEEEeccCcccc---------------------CCCCCCcceeeEEeeeCC--ceEeCCCCCCHHhhhccchhH
Q 025278 80 KKFKVGDEVYGDINEKAL---------------------DHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLAT 136 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~---------------------~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~ 136 (255)
+++++||+|++.+...+. .+....|+|++|++++.+ .++++|++++.++++.+++++
T Consensus 74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~ 153 (347)
T cd05278 74 KRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDIL 153 (347)
T ss_pred cccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchh
Confidence 999999999984321100 011236899999999987 899999999999999999999
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCCcccccc----
Q 025278 137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---- 211 (255)
Q Consensus 137 ~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---- 211 (255)
+|||+++...+++++++|+|.| +|++|++++|+|+.+ |. +++++++++++.+.++++|++.++++.+.++.+.
T Consensus 154 ~ta~~~~~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~ 231 (347)
T cd05278 154 PTGFHGAELAGIKPGSTVAVIG-AGPVGLCAVAGARLL-GAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILEL 231 (347)
T ss_pred hheeehhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHH
Confidence 9999998777899999999986 799999999999996 75 7888888889999999999999998876544321
Q ss_pred --CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 212 --PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 212 --~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
.+++|++||++|+......+.+.++ .+|+++.+|...+
T Consensus 232 ~~~~~~d~vld~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 271 (347)
T cd05278 232 TGGRGVDCVIEAVGFEETFEQAVKVVR-PGGTIANVGVYGK 271 (347)
T ss_pred cCCCCCcEEEEccCCHHHHHHHHHHhh-cCCEEEEEcCCCC
Confidence 2479999999997545555566676 7899999987654
No 52
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.2e-33 Score=246.14 Aligned_cols=240 Identities=26% Similarity=0.327 Sum_probs=195.8
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCC-CCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~-~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|||+++..+++ ++++ +++.|+|. +++|+||+.+++||++|+..+.|.++. .++|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~~----~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~p~~~G~e~~G~V~~vG~~v 73 (386)
T cd08283 1 MKALVWHGKGD----VRVE-EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG--MKKGDILGHEFMGVVEEVGPEV 73 (386)
T ss_pred CeeEEEecCCC----ceEE-eCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC--CCCCccccccceEEEEEeCCCC
Confidence 99999987654 4888 78999884 999999999999999999999998753 3568899999999999999999
Q ss_pred CCCCCCCEEEeccCcccc---------------------------------CC-----CCCCcceeeEEeeeCC--ceEe
Q 025278 80 KKFKVGDEVYGDINEKAL---------------------------------DH-----PKRNGSLAEYTAVEEN--LLAL 119 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~---------------------------------~~-----~~~~g~~~~~~~~~~~--~~~~ 119 (255)
+++++||+|++.+...+. .+ ....|+|++|++++.+ .+++
T Consensus 74 ~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~ 153 (386)
T cd08283 74 RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK 153 (386)
T ss_pred CCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence 999999999885421000 00 0136899999999988 8999
Q ss_pred CCCCCCHHhhhccchhHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCC
Q 025278 120 KPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD 198 (255)
Q Consensus 120 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~ 198 (255)
+|+++++++++.++.+.+|||++++...+++|++|+|+| +|++|++++++|+++ |. +++++++++++.+.+++++..
T Consensus 154 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~-g~~~vi~~~~~~~~~~~~~~~~~~ 231 (386)
T cd08283 154 IPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWG-CGPVGLFAARSAKLL-GAERVIAIDRVPERLEMARSHLGA 231 (386)
T ss_pred CCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCc
Confidence 999999999999999999999999778899999999997 799999999999996 76 588999999999999998444
Q ss_pred EEEcCCCcc-ccc----c--CCCccEEEECCCCcc---------------------ceeeeeeccccCCceEEEEeeccC
Q 025278 199 LAIDYTKEN-IED----L--PEKFDVVFDAVGKMC---------------------ISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 199 ~v~~~~~~~-~~~----~--~~~~d~vid~~G~~~---------------------~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
.++++...+ +.+ . .+++|++||++|+.. ....+.++++ ++|+++.+|..+.
T Consensus 232 ~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~iv~~g~~~~ 310 (386)
T cd08283 232 ETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVR-KGGTVSIIGVYGG 310 (386)
T ss_pred EEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhc-cCCEEEEEcCCCC
Confidence 677766542 322 1 237999999998642 2333456666 7899999997654
No 53
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.3e-33 Score=243.90 Aligned_cols=239 Identities=25% Similarity=0.342 Sum_probs=198.9
Q ss_pred CeEEEEcccCCCccceEEeecccCCCC-CCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~-~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|||+++++++. ++++ +.+.|+| .++||+||+.++++|++|+..+.|.++. .++|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~~----~~~~-~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~~G~~v 73 (345)
T cd08286 1 MKALVYHGPGK----ISWE-DRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT--VTPGRILGHEGVGVVEEVGSAV 73 (345)
T ss_pred CceEEEecCCc----eeEE-ecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC--CCCCceecccceEEEEEeccCc
Confidence 99999998775 4888 8899886 8999999999999999999999887642 3447899999999999999999
Q ss_pred CCCCCCCEEEeccCcccc-------------------CCCCCCcceeeEEeeeCC--ceEeCCCCCCHHhhhccchhHHH
Q 025278 80 KKFKVGDEVYGDINEKAL-------------------DHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATET 138 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~-------------------~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~t 138 (255)
+++++||+|+..+...+. .+....|+|++|+.++.+ .++++|++++..+++.+++++++
T Consensus 74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t 153 (345)
T cd08286 74 TNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT 153 (345)
T ss_pred cccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHH
Confidence 999999999885421100 111235899999999987 89999999999999999999999
Q ss_pred HHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c-
Q 025278 139 AYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L- 211 (255)
Q Consensus 139 a~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~- 211 (255)
||+++ ....+.++++|+|.| +|++|++++|+|+.+ | .++++++++++|.+.++++|++.++++...++.. .
T Consensus 154 a~~~~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~ 231 (345)
T cd08286 154 GYECGVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLY-SPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELT 231 (345)
T ss_pred HHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHh
Confidence 99876 567889999999987 699999999999996 7 7888888899999999999999999886544322 1
Q ss_pred -CCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 212 -PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 212 -~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
.+++|++|||+|.......+.+.++ ++|+++.+|..+
T Consensus 232 ~~~~~d~vld~~g~~~~~~~~~~~l~-~~g~~v~~g~~~ 269 (345)
T cd08286 232 DGRGVDVVIEAVGIPATFELCQELVA-PGGHIANVGVHG 269 (345)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHhcc-CCcEEEEecccC
Confidence 2479999999987666655667776 789999999754
No 54
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=4.4e-33 Score=238.20 Aligned_cols=237 Identities=32% Similarity=0.427 Sum_probs=201.6
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCC-CCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|||+++++++.. ..+++. +.+.|.+.++||+||+.++++|++|+....|..+.. ....|.++|||++|+|+++|+++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v 78 (324)
T cd08244 1 MRAIRLHEFGPP-EVLVPE-DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGV 78 (324)
T ss_pred CeEEEEcCCCCc-cceEEe-ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCC
Confidence 999999987776 667787 677778899999999999999999999888765321 23457889999999999999999
Q ss_pred CCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHhcccCCCCEEEEEcC
Q 025278 80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ga 159 (255)
..+++||+|++... ...|+|++|+.++...++++|+++++++++.+++++.|||..++..+++++++|+|+|+
T Consensus 79 ~~~~~Gd~V~~~~~-------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~ 151 (324)
T cd08244 79 DPAWLGRRVVAHTG-------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAA 151 (324)
T ss_pred CCCCCCCEEEEccC-------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 99999999998642 13689999999999999999999999999999999999976567788999999999999
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc------CCCccEEEECCCCccceeeeee
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGKMCISIVYQK 233 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~~~~d~vid~~G~~~~~~~~~~ 233 (255)
+|++|++++++|+.+ |.+++++++++++.+.++++|++.++++.+.++.+. .+++|+++|++|+... ..+.+
T Consensus 152 ~~~~g~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~-~~~~~ 229 (324)
T cd08244 152 AGGLGSLLVQLAKAA-GATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIG-RAALA 229 (324)
T ss_pred CchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhH-HHHHH
Confidence 999999999999995 999999999999999999999998888765543221 2479999999998754 55566
Q ss_pred ccccCCceEEEEeecc
Q 025278 234 CDKFQEKSLINFGLFR 249 (255)
Q Consensus 234 ~~~~~~G~~v~~G~~~ 249 (255)
.++ .+|+++.+|...
T Consensus 230 ~l~-~~g~~v~~g~~~ 244 (324)
T cd08244 230 LLA-PGGRFLTYGWAS 244 (324)
T ss_pred Hhc-cCcEEEEEecCC
Confidence 676 689999999764
No 55
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=4.5e-33 Score=238.25 Aligned_cols=239 Identities=28% Similarity=0.338 Sum_probs=197.3
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||++++.++++ +.++++ +.|.|.+.++||+||+.++++|++|+..+.|.++. ...+|.++|||++|+|+++ +++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~--~~~ 75 (325)
T cd05280 1 FKALVVEEQDGG-VSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV-TRNYPHTPGIDAAGTVVSS--DDP 75 (325)
T ss_pred CceEEEcccCCC-CcceEE-eCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC-CCCCCCccCcccEEEEEEe--CCC
Confidence 999999999875 557898 89999999999999999999999999999887542 2345788999999999998 456
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHh---cccC-CCCEEEE
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER---SAFS-AGKSILV 156 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~---~~~~-~g~~VlI 156 (255)
.+++||+|++.... .+....|+|++|+.++.+.++++|+++++++++.+++.+.++|+++.. ..+. .+++|+|
T Consensus 76 ~~~~Gd~V~~~~~~---~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (325)
T cd05280 76 RFREGDEVLVTGYD---LGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV 152 (325)
T ss_pred CCCCCCEEEEcccc---cCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEE
Confidence 79999999986321 122236899999999999999999999999999999999999998853 2335 4579999
Q ss_pred EcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcc--ccc--cCCCccEEEECCCCccceeeee
Q 025278 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN--IED--LPEKFDVVFDAVGKMCISIVYQ 232 (255)
Q Consensus 157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~--~~~~~d~vid~~G~~~~~~~~~ 232 (255)
+|++|++|++++++|+.+ |++++++++++++++.++++|+++++++.+.. ... ..+++|++||++|+. ....+.
T Consensus 153 ~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~ 230 (325)
T cd05280 153 TGATGGVGSIAVAILAKL-GYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGD-VLANLL 230 (325)
T ss_pred ECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchH-HHHHHH
Confidence 998899999999999995 99999999999999999999999998875431 111 124799999999985 455567
Q ss_pred eccccCCceEEEEeeccC
Q 025278 233 KCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 233 ~~~~~~~G~~v~~G~~~~ 250 (255)
++++ .+|+++.+|....
T Consensus 231 ~~l~-~~g~~v~~g~~~~ 247 (325)
T cd05280 231 KQTK-YGGVVASCGNAAG 247 (325)
T ss_pred Hhhc-CCCEEEEEecCCC
Confidence 7776 7899999997643
No 56
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=3.7e-33 Score=245.34 Aligned_cols=246 Identities=31% Similarity=0.408 Sum_probs=195.8
Q ss_pred CeEEEEc--ccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCC-------C-CCCCCcccccceEE
Q 025278 1 MKAWVYK--EYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-------T-DSPLPTIPGYDVAG 70 (255)
Q Consensus 1 mka~v~~--~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~-------~-~~~~p~~~G~e~~G 70 (255)
|||+++. .++++...++++ +.+.|.++++||+||+.+++||++|++...+.... . ....+.++|||++|
T Consensus 13 ~~a~~~~~~~~g~~~~~~~~~-~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G 91 (393)
T cd08246 13 MYAFAIRPERYGDPAQAIQLE-DVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASG 91 (393)
T ss_pred hhheeeecccCCCcccceEEe-ecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEE
Confidence 8898885 344442357888 88999999999999999999999999887764100 0 01123589999999
Q ss_pred EEEEeCCCCCCCCCCCEEEeccCcccc------------------CCC-CCCcceeeEEeeeCCceEeCCCCCCHHhhhc
Q 025278 71 VVEKVGSQVKKFKVGDEVYGDINEKAL------------------DHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAAS 131 (255)
Q Consensus 71 ~V~~~G~~v~~~~~Gd~V~~~~~~~~~------------------~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~ 131 (255)
+|+++|++++.+++||+|++.+...+. .+. ...|+|++|+.++...++++|+++++++++.
T Consensus 92 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~ 171 (393)
T cd08246 92 IVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAA 171 (393)
T ss_pred EEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhh
Confidence 999999999999999999886421110 000 1258999999999999999999999999999
Q ss_pred cchhHHHHHHHHHh---cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcc-
Q 025278 132 LPLATETAYEGLER---SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN- 207 (255)
Q Consensus 132 l~~~~~ta~~~l~~---~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~- 207 (255)
+++++.|||+++.. .++++|++|+|+|++|++|++++++|+.+ |+++++++++++|++.++++|+++++++++.+
T Consensus 172 l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~-G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~ 250 (393)
T cd08246 172 YMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAA-GANPVAVVSSEEKAEYCRALGAEGVINRRDFDH 250 (393)
T ss_pred hcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCCEEEccccccc
Confidence 99999999999843 67899999999998899999999999996 99999999999999999999999999874321
Q ss_pred ---------------------ccc----c--CC-CccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 208 ---------------------IED----L--PE-KFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 208 ---------------------~~~----~--~~-~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+.+ . .. ++|++||++|+. ....+.++++ .+|+++.+|...+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~-~~G~~v~~g~~~~ 319 (393)
T cd08246 251 WGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCD-RGGMVVICAGTTG 319 (393)
T ss_pred ccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhc-cCCEEEEEcccCC
Confidence 101 1 12 799999999974 3455567776 6899999987543
No 57
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.7e-33 Score=240.78 Aligned_cols=231 Identities=28% Similarity=0.378 Sum_probs=184.1
Q ss_pred eEEEEccc----CCCccceEEeec--ccCC-CCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCccccc--ceEEEE
Q 025278 2 KAWVYKEY----GNSQSVLKFETN--VEVP-SLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGY--DVAGVV 72 (255)
Q Consensus 2 ka~v~~~~----~~~~~~l~~~~~--~~~p-~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~--e~~G~V 72 (255)
|+|++.++ -.+ +.|++++. .+.| ++++|||+||+.++++|+.|...+.+..+ ....|.++|+ |++|+|
T Consensus 10 ~~~~~~~~~~~~~~~-~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~--~~~~p~~~G~~~~~~G~v 86 (348)
T PLN03154 10 KQVILKNYIDGIPKE-TDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD--SYLPPFVPGQRIEGFGVS 86 (348)
T ss_pred eEEEEecCCCCCCCc-ccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC--CCCCCcCCCCeeEeeEEE
Confidence 56777322 122 45788732 3555 45899999999999999998765443221 1235789998 889999
Q ss_pred EEeCCCCCCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCc--eEe--CCCCCCHH-hhhccchhHHHHHHHH-Hhc
Q 025278 73 EKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENL--LAL--KPKNLSFV-EAASLPLATETAYEGL-ERS 146 (255)
Q Consensus 73 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~--lp~~~~~~-~aa~l~~~~~ta~~~l-~~~ 146 (255)
..+|++++++++||+|++ .|+|+||.+++... +++ +|++++++ +++.++++.+|||+++ +..
T Consensus 87 ~~vg~~v~~~~~Gd~V~~------------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~ 154 (348)
T PLN03154 87 KVVDSDDPNFKPGDLISG------------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVC 154 (348)
T ss_pred EEEecCCCCCCCCCEEEe------------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhc
Confidence 999999999999999987 36899999998753 544 58999986 6778899999999999 467
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCCCEEEcCCCc-ccccc-----CCCccEEE
Q 025278 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKE-NIEDL-----PEKFDVVF 219 (255)
Q Consensus 147 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~-----~~~~d~vi 219 (255)
.+++|++|+|+|++|++|++++|+|+.+ |+++++++++++|++.++ ++|+++++++.+. ++.+. .+++|++|
T Consensus 155 ~~~~g~~VlV~GaaG~vG~~aiqlAk~~-G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~ 233 (348)
T PLN03154 155 SPKKGDSVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYF 233 (348)
T ss_pred CCCCCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEE
Confidence 8999999999998899999999999995 999999999999999987 7999999998643 33221 34799999
Q ss_pred ECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 220 DAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 220 d~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
|++|+. ....+..+++ ++|+++.+|..++
T Consensus 234 d~vG~~-~~~~~~~~l~-~~G~iv~~G~~~~ 262 (348)
T PLN03154 234 DNVGGD-MLDAALLNMK-IHGRIAVCGMVSL 262 (348)
T ss_pred ECCCHH-HHHHHHHHhc-cCCEEEEECcccc
Confidence 999975 4556677777 7899999998764
No 58
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=4.7e-33 Score=238.44 Aligned_cols=239 Identities=27% Similarity=0.323 Sum_probs=195.0
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||++++.+++. ..++++ +.+.|.|.++||+||+.++++|++|.....+... ....+|.++|||++|+|++.| +.
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~~~--~~ 75 (326)
T cd08289 1 FQALVVEKDEDD-VSVSVK-NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK-IVKRYPFIPGIDLAGTVVESN--DP 75 (326)
T ss_pred CeeEEEeccCCc-ceeEEE-EccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc-ccCCCCcCcccceeEEEEEcC--CC
Confidence 999999998876 677888 8999999999999999999999999876643211 123458899999999999954 56
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHh---cc-cCCCCEEEE
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER---SA-FSAGKSILV 156 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~---~~-~~~g~~VlI 156 (255)
++++||+|++.... .+....|+|++|+.++.+.++++|+++++++++.++++..|||+++.. .. ..++++|+|
T Consensus 76 ~~~~Gd~V~~~~~~---~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (326)
T cd08289 76 RFKPGDEVIVTSYD---LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLV 152 (326)
T ss_pred CCCCCCEEEEcccc---cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence 79999999986531 122347999999999999999999999999999999999999988742 23 345789999
Q ss_pred EcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccc---cc-CCCccEEEECCCCccceeeee
Q 025278 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DL-PEKFDVVFDAVGKMCISIVYQ 232 (255)
Q Consensus 157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~~-~~~~d~vid~~G~~~~~~~~~ 232 (255)
+|++|++|++++++|+++ |.+++++++++++.++++++|++.++++.+.... .. .+++|++||++|+. ....+.
T Consensus 153 ~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~ 230 (326)
T cd08289 153 TGATGGVGSLAVSILAKL-GYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGK-TLAYLL 230 (326)
T ss_pred EcCCchHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHH-HHHHHH
Confidence 998899999999999995 9999999999999999999999999887643211 11 24799999999974 455567
Q ss_pred eccccCCceEEEEeeccC
Q 025278 233 KCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 233 ~~~~~~~G~~v~~G~~~~ 250 (255)
..++ .+|+++.+|....
T Consensus 231 ~~l~-~~G~~i~~g~~~~ 247 (326)
T cd08289 231 STLQ-YGGSVAVSGLTGG 247 (326)
T ss_pred HHhh-cCCEEEEEeecCC
Confidence 7776 7899999998643
No 59
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8e-33 Score=234.79 Aligned_cols=225 Identities=32% Similarity=0.408 Sum_probs=191.7
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
||++++++++ + ..++++ +.+.|.+.++||+||+.++++|+.|++...+. ..|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~-~-~~~~~~-~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~------~~~~~~g~e~~G~v~~~G~~v~ 71 (305)
T cd08270 1 MRALVVDPDA-P-LRLRLG-EVPDPQPAPHEALVRVAAISLNRGELKFAAER------PDGAVPGWDAAGVVERAAADGS 71 (305)
T ss_pred CeEEEEccCC-C-ceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHhhccC------CCCCcccceeEEEEEEeCCCCC
Confidence 8999998866 4 567888 78889999999999999999999999876521 2357899999999999999999
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHhcccCCCCEEEEEcCC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA 160 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ga~ 160 (255)
.+++||+|++.. ..|+|++|+.++.+.++++|+++++++++.+++.+.|||+++......+|++|+|+|+.
T Consensus 72 ~~~~Gd~V~~~~---------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~ 142 (305)
T cd08270 72 GPAVGARVVGLG---------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGAS 142 (305)
T ss_pred CCCCCCEEEEec---------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence 999999999864 25899999999999999999999999999999999999999865554569999999988
Q ss_pred chHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCccceeeeeeccccCCc
Q 025278 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMCISIVYQKCDKFQEK 240 (255)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~G 240 (255)
|++|++++++|+.. |++++.+++++++.+.++++|++.+++... +.. .+++|+++|++|+.. ...+.++++ .+|
T Consensus 143 ~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~--~~~~d~vl~~~g~~~-~~~~~~~l~-~~G 216 (305)
T cd08270 143 GGVGRFAVQLAALA-GAHVVAVVGSPARAEGLRELGAAEVVVGGS-ELS--GAPVDLVVDSVGGPQ-LARALELLA-PGG 216 (305)
T ss_pred cHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEeccc-ccc--CCCceEEEECCCcHH-HHHHHHHhc-CCC
Confidence 99999999999995 899999999999999999999876654322 111 247999999999764 455677776 689
Q ss_pred eEEEEeecc
Q 025278 241 SLINFGLFR 249 (255)
Q Consensus 241 ~~v~~G~~~ 249 (255)
+++.+|...
T Consensus 217 ~~v~~g~~~ 225 (305)
T cd08270 217 TVVSVGSSS 225 (305)
T ss_pred EEEEEeccC
Confidence 999999754
No 60
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=4.9e-33 Score=239.94 Aligned_cols=239 Identities=25% Similarity=0.310 Sum_probs=193.3
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCC---------CCCCCCCcccccceEEE
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS---------ATDSPLPTIPGYDVAGV 71 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~---------~~~~~~p~~~G~e~~G~ 71 (255)
|||+++..+ . ++++ +.+.|+++++||+||+.++++|+.|+....|... .....+|.++|||++|+
T Consensus 1 m~a~~~~~~--~---~~~~-~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~ 74 (341)
T cd08262 1 MRAAVFRDG--P---LVVR-DVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGE 74 (341)
T ss_pred CceEEEeCC--c---eEEE-ecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEE
Confidence 999999865 2 6888 8999999999999999999999999999887321 01223578899999999
Q ss_pred EEEeCCCCCC-CCCCCEEEeccCccccCCC--------CCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 72 VEKVGSQVKK-FKVGDEVYGDINEKALDHP--------KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 72 V~~~G~~v~~-~~~Gd~V~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
|+++|+++++ +++||+|++.+...+..+. ...|+|+||+.++.+.++++|+++++++++ ++.++++||++
T Consensus 75 V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~ 153 (341)
T cd08262 75 VVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA 153 (341)
T ss_pred EEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH
Confidence 9999999987 9999999987432221111 136899999999999999999999988776 66788899999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCcccc-------c--cC
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIE-------D--LP 212 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~-------~--~~ 212 (255)
+...++++|++|+|+| +|++|.+++|+|+.+ |++ +++++.++++.+.++++|+++++++...+.. . ..
T Consensus 154 ~~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ 231 (341)
T cd08262 154 VRRARLTPGEVALVIG-CGPIGLAVIAALKAR-GVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGG 231 (341)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCC
Confidence 8788899999999997 699999999999996 776 5566778999999999999999987654211 1 12
Q ss_pred CCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 213 EKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 213 ~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
+++|++||++|+......+.+.++ .+|+++.+|...
T Consensus 232 ~~~d~vid~~g~~~~~~~~~~~l~-~~g~~v~~g~~~ 267 (341)
T cd08262 232 PKPAVIFECVGAPGLIQQIIEGAP-PGGRIVVVGVCM 267 (341)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhc-cCCEEEEECCCC
Confidence 469999999997544555566666 789999999764
No 61
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2.3e-33 Score=240.63 Aligned_cols=212 Identities=28% Similarity=0.371 Sum_probs=179.0
Q ss_pred cceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEeccC
Q 025278 14 SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN 93 (255)
Q Consensus 14 ~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~ 93 (255)
+.++++ +.+.|+|++|||+|||.++++|+.+. +|.++ ....|.++|.|++|+|++.|+ .+++||||++.
T Consensus 17 ~~l~~~-~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~--~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-- 85 (325)
T TIGR02825 17 SDFELK-TVELPPLNNGEVLLEALFLSVDPYMR---VAAKR--LKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS-- 85 (325)
T ss_pred CceEEE-eccCCCCCCCcEEEEEEEEecCHHHh---cccCc--CCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe--
Confidence 568888 89999999999999999999999654 34332 123478999999999999774 59999999973
Q ss_pred ccccCCCCCCcceeeEEeeeCCceEeC----CCCCCHHhh-hccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHH
Q 025278 94 EKALDHPKRNGSLAEYTAVEENLLALK----PKNLSFVEA-ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMV 167 (255)
Q Consensus 94 ~~~~~~~~~~g~~~~~~~~~~~~~~~l----p~~~~~~~a-a~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a 167 (255)
++|++|++++.+.+.++ |++++++++ +.++++++|||+++ +..++++|++|+|+|++|++|+++
T Consensus 86 ----------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~a 155 (325)
T TIGR02825 86 ----------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVV 155 (325)
T ss_pred ----------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHH
Confidence 46999999999888877 899999887 67899999999998 678899999999999999999999
Q ss_pred HHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCc-cccc----c-CCCccEEEECCCCccceeeeeeccccCCce
Q 025278 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE-NIED----L-PEKFDVVFDAVGKMCISIVYQKCDKFQEKS 241 (255)
Q Consensus 168 ~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~----~-~~~~d~vid~~G~~~~~~~~~~~~~~~~G~ 241 (255)
+|+|+.. |+++++++++++|.++++++|+++++++++. ++.+ . .+++|++||++|+.. ...+.++++ ++|+
T Consensus 156 iqlAk~~-G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~-~~G~ 232 (325)
T TIGR02825 156 GQIAKLK-GCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEF-SNTVIGQMK-KFGR 232 (325)
T ss_pred HHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHH-HHHHHHHhC-cCcE
Confidence 9999995 9999999999999999999999999998763 3322 1 247999999999765 456677777 7999
Q ss_pred EEEEeecc
Q 025278 242 LINFGLFR 249 (255)
Q Consensus 242 ~v~~G~~~ 249 (255)
++.+|..+
T Consensus 233 iv~~G~~~ 240 (325)
T TIGR02825 233 IAICGAIS 240 (325)
T ss_pred EEEecchh
Confidence 99999754
No 62
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=7.9e-33 Score=237.50 Aligned_cols=235 Identities=34% Similarity=0.497 Sum_probs=200.1
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++..++.. ..++++ +.+.|++.++||+||+.++++|+.|+....|.++. ....|.++|||++|+|+++|++++
T Consensus 2 m~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~ 78 (334)
T PTZ00354 2 MRAVTLKGFGGV-DVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP-PPGSSEILGLEVAGYVEDVGSDVK 78 (334)
T ss_pred cEEEEEEecCCC-cceEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCcccceeeEEEEEEeCCCCC
Confidence 999999998876 567887 67778899999999999999999999998886532 234467899999999999999999
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga 159 (255)
++++||+|++.. .+|+|++|++++...++++|++++.++++.+++++.+||+++. ...+++|++|+|+|+
T Consensus 79 ~~~~Gd~V~~~~---------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga 149 (334)
T PTZ00354 79 RFKEGDRVMALL---------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAG 149 (334)
T ss_pred CCCCCCEEEEec---------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 999999999863 1589999999999999999999999999989999999999985 478999999999999
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcc-ccc----c--CCCccEEEECCCCccceeeee
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IED----L--PEKFDVVFDAVGKMCISIVYQ 232 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~----~--~~~~d~vid~~G~~~~~~~~~ 232 (255)
+|++|++++++|+++ |++++++++++++.+.++++|+++++++...+ +.+ . .+++|++||++|+.. ...+.
T Consensus 150 ~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~ 227 (334)
T PTZ00354 150 ASGVGTAAAQLAEKY-GAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETA 227 (334)
T ss_pred CchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHH-HHHHH
Confidence 999999999999996 99988899999999999999999898875533 221 1 247999999998643 44456
Q ss_pred eccccCCceEEEEeeccC
Q 025278 233 KCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 233 ~~~~~~~G~~v~~G~~~~ 250 (255)
.++. .+|+++.+|...+
T Consensus 228 ~~l~-~~g~~i~~~~~~~ 244 (334)
T PTZ00354 228 EVLA-VDGKWIVYGFMGG 244 (334)
T ss_pred HHhc-cCCeEEEEecCCC
Confidence 6666 7899999986543
No 63
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=5.8e-33 Score=238.25 Aligned_cols=231 Identities=29% Similarity=0.406 Sum_probs=197.7
Q ss_pred CeEEEEcccCC--CccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCC
Q 025278 1 MKAWVYKEYGN--SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78 (255)
Q Consensus 1 mka~v~~~~~~--~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~ 78 (255)
||||++..+++ . +.++++ +.+.|.+.++|++||+.++++|++|+....|.++.. ..+|.++|||++|+|+.+|++
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~p~~~g~e~~G~v~~vG~~ 78 (329)
T cd08250 2 FRKLVVHRLSPNFR-EATSIV-DVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG-VKPPFDCGFEGVGEVVAVGEG 78 (329)
T ss_pred ceEEEeccCCCCcc-cCceEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC-CCCCcccCceeEEEEEEECCC
Confidence 99999999887 5 567888 789999999999999999999999999888876422 457889999999999999999
Q ss_pred CCCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEE
Q 025278 79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVL 157 (255)
Q Consensus 79 v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ 157 (255)
+.++++||+|++.. .|+|++|+.++.+.++++|+.. .+++.+++++.+||+++. ..++++|++|+|+
T Consensus 79 v~~~~~Gd~V~~~~----------~g~~~s~~~v~~~~~~~ip~~~--~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ 146 (329)
T cd08250 79 VTDFKVGDAVATMS----------FGAFAEYQVVPARHAVPVPELK--PEVLPLLVSGLTASIALEEVGEMKSGETVLVT 146 (329)
T ss_pred CCCCCCCCEEEEec----------CcceeEEEEechHHeEECCCCc--chhhhcccHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 99999999999864 5899999999999999999973 466778889999999984 5789999999999
Q ss_pred cCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc-----cCCCccEEEECCCCccceeeee
Q 025278 158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGKMCISIVYQ 232 (255)
Q Consensus 158 ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-----~~~~~d~vid~~G~~~~~~~~~ 232 (255)
|++|.+|++++++|+.. |.+++++++++++.+.++++|++.+++....++.+ ..+++|++||++|+. ....+.
T Consensus 147 ga~g~ig~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~-~~~~~~ 224 (329)
T cd08250 147 AAAGGTGQFAVQLAKLA-GCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGE-MFDTCV 224 (329)
T ss_pred eCccHHHHHHHHHHHHc-CCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHH-HHHHHH
Confidence 99999999999999995 99999999999999999999998888776544322 125799999999974 445556
Q ss_pred eccccCCceEEEEeecc
Q 025278 233 KCDKFQEKSLINFGLFR 249 (255)
Q Consensus 233 ~~~~~~~G~~v~~G~~~ 249 (255)
+.++ .+|+++.+|...
T Consensus 225 ~~l~-~~g~~v~~g~~~ 240 (329)
T cd08250 225 DNLA-LKGRLIVIGFIS 240 (329)
T ss_pred HHhc-cCCeEEEEeccc
Confidence 6666 689999999765
No 64
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=2e-33 Score=242.34 Aligned_cols=240 Identities=36% Similarity=0.505 Sum_probs=199.9
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||++++.++ + ..++++ +.+.|+|+++||+||+.++++|++|+....+.+ ....|.++|||++|+|+.+|++++
T Consensus 1 m~a~~~~~~~-~-~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~~v~ 74 (339)
T cd08249 1 QKAAVLTGPG-G-GLLVVV-DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF---IPSYPAILGCDFAGTVVEVGSGVT 74 (339)
T ss_pred CceEEeccCC-C-Cccccc-CCCCCCCCCCEEEEEEEEEEcCchheeeeeccc---ccCCCceeeeeeeEEEEEeCCCcC
Confidence 9999999996 3 456888 899999999999999999999999988775543 123467899999999999999999
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcc----------cC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSA----------FS 149 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~----------~~ 149 (255)
.+++||+|++....... +...+|+|++|++++.+.++++|+++++++++.+++++.|||+++. ..+ +.
T Consensus 75 ~~~~Gd~V~~~~~~~~~-~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~ 153 (339)
T cd08249 75 RFKVGDRVAGFVHGGNP-NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPAS 153 (339)
T ss_pred cCCCCCEEEEEeccccC-CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCC
Confidence 99999999987531111 2224689999999999999999999999999999999999999984 343 37
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc-----CCCccEEEECCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVGK 224 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-----~~~~d~vid~~G~ 224 (255)
++++|+|+|++|.+|++++++|+++ |++++.++ +++|++.++++|+++++++.+.++.+. .+++|++||++|+
T Consensus 154 ~~~~vlI~ga~g~vg~~~~~~a~~~-G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~ 231 (339)
T cd08249 154 KGKPVLIWGGSSSVGTLAIQLAKLA-GYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCIST 231 (339)
T ss_pred CCCEEEEEcChhHHHHHHHHHHHHc-CCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeecc
Confidence 8999999998899999999999995 99998877 568999999999999998876543321 3579999999998
Q ss_pred ccceeeeeeccccC--CceEEEEeeccC
Q 025278 225 MCISIVYQKCDKFQ--EKSLINFGLFRQ 250 (255)
Q Consensus 225 ~~~~~~~~~~~~~~--~G~~v~~G~~~~ 250 (255)
+.....+.++++ . +|+++.+|....
T Consensus 232 ~~~~~~~~~~l~-~~~~g~~v~~g~~~~ 258 (339)
T cd08249 232 PESAQLCAEALG-RSGGGKLVSLLPVPE 258 (339)
T ss_pred chHHHHHHHHHh-ccCCCEEEEecCCCc
Confidence 566667777777 7 899999987654
No 65
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=6.3e-33 Score=241.41 Aligned_cols=239 Identities=29% Similarity=0.398 Sum_probs=200.3
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++..++.. ++++ +.+.|++.++||+||+.++++|+.|+..+.|.++ ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v~ 73 (363)
T cd08279 1 MRAAVLHEVGKP---LEIE-EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP---APLPAVLGHEGAGVVEEVGPGVT 73 (363)
T ss_pred CeEEEEecCCCC---ceEE-EeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC---CCCCccccccceEEEEEeCCCcc
Confidence 999999988755 6888 7899999999999999999999999999988764 34577899999999999999999
Q ss_pred CCCCCCEEEeccCcc--------------ccCC------------------------CCCCcceeeEEeeeCCceEeCCC
Q 025278 81 KFKVGDEVYGDINEK--------------ALDH------------------------PKRNGSLAEYTAVEENLLALKPK 122 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~--------------~~~~------------------------~~~~g~~~~~~~~~~~~~~~lp~ 122 (255)
.+++||+|++..... +..+ ....|+|++|+.++.+.++++|+
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~ 153 (363)
T cd08279 74 GVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDD 153 (363)
T ss_pred ccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCC
Confidence 999999999852110 0000 01358999999999999999999
Q ss_pred CCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEE
Q 025278 123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLA 200 (255)
Q Consensus 123 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v 200 (255)
++++++++.++++..+||+++ +...+.++++|+|+| +|++|++++++|+.+ |.+ ++++++++++.+.++++|++++
T Consensus 154 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~-G~~~Vi~~~~~~~~~~~~~~~g~~~v 231 (363)
T cd08279 154 DIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIA-GASRIIAVDPVPEKLELARRFGATHT 231 (363)
T ss_pred CCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHHhCCeEE
Confidence 999999999999999999987 567899999999996 799999999999996 886 8888999999999999999999
Q ss_pred EcCCCccccc----c--CCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 201 IDYTKENIED----L--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 201 ~~~~~~~~~~----~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
++++..++.. . .+++|++||++|+......+.+.++ .+|+++.+|...
T Consensus 232 v~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~-~~G~~v~~g~~~ 285 (363)
T cd08279 232 VNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTR-KGGTAVVVGMGP 285 (363)
T ss_pred eCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhh-cCCeEEEEecCC
Confidence 9876644322 1 3579999999997655566667776 789999998754
No 66
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.3e-32 Score=236.18 Aligned_cols=239 Identities=29% Similarity=0.373 Sum_probs=200.0
Q ss_pred CeEEEEcccCCCc-cceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQ-SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~-~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|||+++.+++.+. ..++++ +.+.|.+.++||+||+.++++|++|+..+.|.++. ...|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v 77 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLT-EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP--PKLPLIPGHEIVGRVEAVGPGV 77 (329)
T ss_pred CeEEEEecCCCCCCCCceEE-eccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC--CCCCccccccccEEEEEECCCC
Confidence 8999999888421 236787 77888899999999999999999999999887643 3557899999999999999999
Q ss_pred CCCCCCCEEEeccC-----c--------------cccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHH
Q 025278 80 KKFKVGDEVYGDIN-----E--------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~-----~--------------~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~ 140 (255)
.++++||+|+..+. + ....+....|+|++|+.++...++++|+++++.+++.+++++.|||
T Consensus 78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~ 157 (329)
T cd08298 78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGY 157 (329)
T ss_pred CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHH
Confidence 99999999986311 0 0001122368999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEE
Q 025278 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFD 220 (255)
Q Consensus 141 ~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid 220 (255)
++++..+++++++|+|+| +|++|+++++++++. |.+++++++++++++.++++|++.+++.... ..+++|++++
T Consensus 158 ~~~~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~vD~vi~ 231 (329)
T cd08298 158 RALKLAGLKPGQRLGLYG-FGASAHLALQIARYQ-GAEVFAFTRSGEHQELARELGADWAGDSDDL----PPEPLDAAII 231 (329)
T ss_pred HHHHhhCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEcCChHHHHHHHHhCCcEEeccCcc----CCCcccEEEE
Confidence 999888999999999997 899999999999995 8999999999999999999999888876543 1347999999
Q ss_pred CCCCccceeeeeeccccCCceEEEEeecc
Q 025278 221 AVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 221 ~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
+++.......+.+.++ .+|+++.+|...
T Consensus 232 ~~~~~~~~~~~~~~l~-~~G~~v~~g~~~ 259 (329)
T cd08298 232 FAPVGALVPAALRAVK-KGGRVVLAGIHM 259 (329)
T ss_pred cCCcHHHHHHHHHHhh-cCCEEEEEcCCC
Confidence 9876666666677777 789999988643
No 67
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=5.4e-33 Score=240.60 Aligned_cols=243 Identities=26% Similarity=0.354 Sum_probs=200.1
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCC----------CCCCCCcccccceEE
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA----------TDSPLPTIPGYDVAG 70 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~----------~~~~~p~~~G~e~~G 70 (255)
|||+++..++.. ++++ +.|.|++.++||+||+.++++|++|+..+.|.++. ...+.|.++|||++|
T Consensus 1 ~~a~~~~~~~~~---~~~~-~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G 76 (350)
T cd08240 1 MKAAAVVEPGKP---LEEV-EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVG 76 (350)
T ss_pred CeeEEeccCCCC---ceEE-ecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeE
Confidence 999999988765 6888 89999999999999999999999999999886531 123456789999999
Q ss_pred EEEEeCCCCCCCCCCCEEEeccCcccc------------------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhcc
Q 025278 71 VVEKVGSQVKKFKVGDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL 132 (255)
Q Consensus 71 ~V~~~G~~v~~~~~Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l 132 (255)
+|+++|++++++++||+|++.+...+. .+....|+|++|+.++...++++|+++++.+++.+
T Consensus 77 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l 156 (350)
T cd08240 77 EVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATL 156 (350)
T ss_pred EEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehh
Confidence 999999999999999999886321000 00113689999999999999999999999999999
Q ss_pred chhHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCCccccc
Q 025278 133 PLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED 210 (255)
Q Consensus 133 ~~~~~ta~~~l~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 210 (255)
++.++|||++++. ...+++++|+|+| +|++|++++|+|+.+ |+ ++++++.+++|.+.++++|++.++++++..+.+
T Consensus 157 ~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 234 (350)
T cd08240 157 ACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKAL-GPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAK 234 (350)
T ss_pred hchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHH
Confidence 9999999999964 4456899999997 899999999999996 87 678888999999999999998888876544321
Q ss_pred ----c-CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 211 ----L-PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 211 ----~-~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
. .+++|++||++|.......+.+.++ .+|+++.+|..++
T Consensus 235 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~g~~v~~g~~~~ 278 (350)
T cd08240 235 RIIKAAGGGVDAVIDFVNNSATASLAFDILA-KGGKLVLVGLFGG 278 (350)
T ss_pred HHHHHhCCCCcEEEECCCCHHHHHHHHHHhh-cCCeEEEECCCCC
Confidence 1 2379999999997666666677777 7899999987654
No 68
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=8.8e-33 Score=243.26 Aligned_cols=246 Identities=33% Similarity=0.448 Sum_probs=197.7
Q ss_pred CeEEEEcc--cCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCC--------CCCCCC-cccccceE
Q 025278 1 MKAWVYKE--YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA--------TDSPLP-TIPGYDVA 69 (255)
Q Consensus 1 mka~v~~~--~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~--------~~~~~p-~~~G~e~~ 69 (255)
||||++.. ++++.+.+++. +.+.|.|.++||+||+.++++|++|++...+.... .....| .++|||++
T Consensus 8 ~~a~~~~~~~~~~~~~~~~~~-~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~ 86 (398)
T TIGR01751 8 MYAFAIREERDGDPRQAIQLE-VVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDAS 86 (398)
T ss_pred hhheEEecccCCCcccceEEe-ecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceE
Confidence 89999965 67654668898 89999999999999999999999998876553210 001223 37999999
Q ss_pred EEEEEeCCCCCCCCCCCEEEeccCcccc------------------CC-CCCCcceeeEEeeeCCceEeCCCCCCHHhhh
Q 025278 70 GVVEKVGSQVKKFKVGDEVYGDINEKAL------------------DH-PKRNGSLAEYTAVEENLLALKPKNLSFVEAA 130 (255)
Q Consensus 70 G~V~~~G~~v~~~~~Gd~V~~~~~~~~~------------------~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa 130 (255)
|+|+++|++++.+++||+|++.+...+. .+ ....|+|+||+.++...++++|+++++++++
T Consensus 87 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa 166 (398)
T TIGR01751 87 GVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAA 166 (398)
T ss_pred EEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHh
Confidence 9999999999999999999886421000 00 1135899999999999999999999999999
Q ss_pred ccchhHHHHHHHHH---hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcc
Q 025278 131 SLPLATETAYEGLE---RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN 207 (255)
Q Consensus 131 ~l~~~~~ta~~~l~---~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~ 207 (255)
.++++..+||+++. ..++.+|++|+|+|++|++|++++++|+++ |++++++++++++.+.++++|++.++|+.+.+
T Consensus 167 ~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~-G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~ 245 (398)
T TIGR01751 167 CPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAG-GGNPVAVVSSPEKAEYCRELGAEAVIDRNDFG 245 (398)
T ss_pred hccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCCEEecCCCcc
Confidence 99999999999984 367899999999998899999999999995 99999999999999999999999999875431
Q ss_pred ----------------------ccc----c--CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 208 ----------------------IED----L--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 208 ----------------------~~~----~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+.+ . .+++|++|||+|.. ....+..+++ .+|+++.+|....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~-~~G~~v~~g~~~~ 314 (398)
T TIGR01751 246 HWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCR-RGGMVVICGGTTG 314 (398)
T ss_pred hhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhc-cCCEEEEEccccC
Confidence 000 1 24699999999964 3455677776 6899999998654
No 69
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=9e-33 Score=238.11 Aligned_cols=240 Identities=28% Similarity=0.368 Sum_probs=200.4
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
|+|+.+.+++. ++++ +.+.|+|.++||+||+.++++|++|++.+.|.++ ..++|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~~---~~~~-~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~--~~~~p~~~g~e~~G~V~~vG~~v~~ 74 (337)
T cd05283 1 KGYAARDASGK---LEPF-TFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG--PTKYPLVPGHEIVGIVVAVGSKVTK 74 (337)
T ss_pred CceEEecCCCC---ceEE-eccCCCCCCCeEEEEEEEecccchHHHHhcCCcC--CCCCCcccCcceeeEEEEECCCCcc
Confidence 67888877744 7888 8999999999999999999999999999988763 3456889999999999999999999
Q ss_pred CCCCCEEEeccC-----c----------cc-----------cCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchh
Q 025278 82 FKVGDEVYGDIN-----E----------KA-----------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA 135 (255)
Q Consensus 82 ~~~Gd~V~~~~~-----~----------~~-----------~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~ 135 (255)
+++||+|+..+. . .+ ..+....|+|+||+.++.+.++++|+++++++++.+++.
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~ 154 (337)
T cd05283 75 FKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA 154 (337)
T ss_pred cCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhH
Confidence 999999973210 0 00 001133689999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccc-cccCCC
Q 025278 136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPEK 214 (255)
Q Consensus 136 ~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~~~~ 214 (255)
..+||++++...+++|++++|.| +|++|++++++|+.+ |.+++.++++++++++++++|++.+++....+. ....++
T Consensus 155 ~~ta~~~~~~~~~~~g~~vlV~g-~g~vG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~ 232 (337)
T cd05283 155 GITVYSPLKRNGVGPGKRVGVVG-IGGLGHLAVKFAKAL-GAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGS 232 (337)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCC
Confidence 99999999777789999999987 899999999999996 899999999999999999999999988765433 222468
Q ss_pred ccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 215 FDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 215 ~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+|++|||+|.......+.+.++ .+|+++.+|....
T Consensus 233 ~d~v~~~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 267 (337)
T cd05283 233 LDLIIDTVSASHDLDPYLSLLK-PGGTLVLVGAPEE 267 (337)
T ss_pred ceEEEECCCCcchHHHHHHHhc-CCCEEEEEeccCC
Confidence 9999999998754455567776 7899999997654
No 70
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=6.5e-33 Score=241.47 Aligned_cols=239 Identities=28% Similarity=0.369 Sum_probs=196.6
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
||+++.+++.. ++++ +.+.|++.++||+||+.++++|++|++.+.+.++ ..+|.++|||++|+|+++|++++.
T Consensus 2 ~a~~~~~~~~~---~~~~-~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~---~~~~~i~g~e~~G~V~~vG~~v~~ 74 (365)
T cd05279 2 KAAVLWEKGKP---LSIE-EIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP---TPLPVILGHEGAGIVESIGPGVTT 74 (365)
T ss_pred ceeEEecCCCC---cEEE-EeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC---CCCCcccccceeEEEEEeCCCccc
Confidence 78888877754 6888 8999999999999999999999999999988753 345789999999999999999999
Q ss_pred CCCCCEEEeccCcccc---------------------------------------CCCCCCcceeeEEeeeCCceEeCCC
Q 025278 82 FKVGDEVYGDINEKAL---------------------------------------DHPKRNGSLAEYTAVEENLLALKPK 122 (255)
Q Consensus 82 ~~~Gd~V~~~~~~~~~---------------------------------------~~~~~~g~~~~~~~~~~~~~~~lp~ 122 (255)
+++||+|++.+...+. .+....|+|++|+.++.+.++++|+
T Consensus 75 ~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 154 (365)
T cd05279 75 LKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDP 154 (365)
T ss_pred CCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCC
Confidence 9999999986321000 0001247899999999999999999
Q ss_pred CCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEE
Q 025278 123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLA 200 (255)
Q Consensus 123 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v 200 (255)
++++++++.+++++.++|+++ +...+++|++|+|+| +|++|++++++|+.+ |.+ +++++++++|++.++++|++++
T Consensus 155 ~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~ 232 (365)
T cd05279 155 DAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAA-GASRIIAVDINKDKFEKAKQLGATEC 232 (365)
T ss_pred CCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCCee
Confidence 999999999998999999987 568899999999997 799999999999996 776 6677789999999999999999
Q ss_pred EcCCCc--cccc-----cCCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 201 IDYTKE--NIED-----LPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 201 ~~~~~~--~~~~-----~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
+++.+. ++.+ ..+++|++||++|.......+.+.+++.+|+++.+|...
T Consensus 233 v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 288 (365)
T cd05279 233 INPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPP 288 (365)
T ss_pred cccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCC
Confidence 987654 3221 135799999999975555556666654679999998753
No 71
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=8.7e-33 Score=238.83 Aligned_cols=241 Identities=30% Similarity=0.429 Sum_probs=201.2
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
||||++..++.+ ++++ +.+.|.+.++||+||+.++++|++|+....|..+. ..+|.++|||++|+|+.+|++++
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~~G~~~~ 74 (345)
T cd08260 1 MRAAVYEEFGEP---LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD--VTLPHVPGHEFAGVVVEVGEDVS 74 (345)
T ss_pred CeeEEEecCCCC---cEEE-EccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC--CCCCeeeccceeEEEEEECCCCc
Confidence 999999988765 6888 78989999999999999999999999998887542 35578999999999999999999
Q ss_pred CCCCCCEEEeccCcc------------------ccCCCCCCcceeeEEeeeCC--ceEeCCCCCCHHhhhccchhHHHHH
Q 025278 81 KFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATETAY 140 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~ 140 (255)
.+++||+|++..... ...+....|+|++|+.++.. .++++|++++.++++.++++.+|||
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~ 154 (345)
T cd08260 75 RWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAF 154 (345)
T ss_pred cCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHH
Confidence 999999998721100 00112236899999999975 8999999999999999999999999
Q ss_pred HHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCC-ccccc----c-CC
Q 025278 141 EGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED----L-PE 213 (255)
Q Consensus 141 ~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~----~-~~ 213 (255)
+++ +..++.++++|+|+| +|++|++++++|+.+ |.+++++++++++.+.++++|++.++++.. .++.+ . .+
T Consensus 155 ~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 232 (345)
T cd08260 155 RALVHQARVKPGEWVAVHG-CGGVGLSAVMIASAL-GARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG 232 (345)
T ss_pred HHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCC
Confidence 998 567889999999999 899999999999995 999999999999999999999999998876 44322 1 12
Q ss_pred CccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 214 KFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 214 ~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
++|++||++|+......+.+.++ .+|+++.+|....
T Consensus 233 ~~d~vi~~~g~~~~~~~~~~~l~-~~g~~i~~g~~~~ 268 (345)
T cd08260 233 GAHVSVDALGIPETCRNSVASLR-KRGRHVQVGLTLG 268 (345)
T ss_pred CCCEEEEcCCCHHHHHHHHHHhh-cCCEEEEeCCcCC
Confidence 79999999997555556677777 7899999997653
No 72
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=7.7e-33 Score=241.19 Aligned_cols=239 Identities=33% Similarity=0.461 Sum_probs=199.3
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
||||++..++.. ++++ +.+.|.+.++||+||+.++++|++|+....+.++ ..+|.++|||++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~---~~~p~~~g~e~~G~v~~vG~~~~ 73 (367)
T cd08263 1 MKAAVLKGPNPP---LTIE-EIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP---FPPPFVLGHEISGEVVEVGPNVE 73 (367)
T ss_pred CeeEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC---CCCCcccccccceEEEEeCCCCC
Confidence 999999988654 6787 7899999999999999999999999999888764 25678999999999999999998
Q ss_pred C---CCCCCEEEeccCccc--------------cCC--------------------------CCCCcceeeEEeeeCCce
Q 025278 81 K---FKVGDEVYGDINEKA--------------LDH--------------------------PKRNGSLAEYTAVEENLL 117 (255)
Q Consensus 81 ~---~~~Gd~V~~~~~~~~--------------~~~--------------------------~~~~g~~~~~~~~~~~~~ 117 (255)
+ +++||+|++.+...+ ..+ ....|+|++|+.++.+.+
T Consensus 74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (367)
T cd08263 74 NPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATAL 153 (367)
T ss_pred CCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhE
Confidence 8 999999998421100 000 013589999999999999
Q ss_pred EeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHc
Q 025278 118 ALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSL 195 (255)
Q Consensus 118 ~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~ 195 (255)
+++|+++++.+++.++++++|||+++. ...+.++++|+|+| +|++|++++++|+.+ |.+ +++++.++++.+.++++
T Consensus 154 ~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~-G~~~vi~~~~s~~~~~~~~~~ 231 (367)
T cd08263 154 APLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAF-GASPIIAVDVRDEKLAKAKEL 231 (367)
T ss_pred EECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHh
Confidence 999999999999999999999999984 46778999999996 899999999999995 888 88888999999999999
Q ss_pred CCCEEEcCCCccccc----c--CCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 196 GADLAIDYTKENIED----L--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 196 g~~~v~~~~~~~~~~----~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
|++.+++++..++.+ . .+++|++||++|+......+.++++ .+|+++.+|...
T Consensus 232 g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~-~~G~~v~~g~~~ 290 (367)
T cd08263 232 GATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVR-DGGRAVVVGLAP 290 (367)
T ss_pred CCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHh-cCCEEEEEccCC
Confidence 999999887655432 1 2479999999998634455567776 789999998654
No 73
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.3e-32 Score=235.16 Aligned_cols=229 Identities=25% Similarity=0.359 Sum_probs=188.5
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++.++++ ++++ +.+.|++.++||+||+.++++|++|+....|.++ .|.++|||++|+|+++|++
T Consensus 1 ~~a~~~~~~~~----~~~~-~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~-----~~~~~G~e~~G~Vv~~G~~-- 68 (319)
T cd08242 1 MKALVLDGGLD----LRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVPGHEFVGIVEEGPEA-- 68 (319)
T ss_pred CeeEEEeCCCc----EEEE-ECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC-----CCCccCceEEEEEEEeCCC--
Confidence 89999997654 5898 8999999999999999999999999999888653 5788999999999999998
Q ss_pred CCCCCCEEEeccCc------------------cccCCC-CCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHH
Q 025278 81 KFKVGDEVYGDINE------------------KALDHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~------------------~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 141 (255)
+++||||...... ....+. ...|+|++|++++.+.++++|++++.++++.+ ....++|.
T Consensus 69 -~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~ 146 (319)
T cd08242 69 -ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE 146 (319)
T ss_pred -CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence 6799999753221 001111 23689999999999999999999998887753 34446777
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEEC
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDA 221 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~ 221 (255)
+++..+++++++|+|+| +|.+|++++|+|+.+ |.++++++.+++++++++++|++.++++... ...+++|++|||
T Consensus 147 ~~~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~d~vid~ 221 (319)
T cd08242 147 ILEQVPITPGDKVAVLG-DGKLGLLIAQVLALT-GPDVVLVGRHSEKLALARRLGVETVLPDEAE---SEGGGFDVVVEA 221 (319)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---ccCCCCCEEEEC
Confidence 77788899999999997 899999999999996 9999999999999999999999988877542 123579999999
Q ss_pred CCCccceeeeeeccccCCceEEEEeecc
Q 025278 222 VGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 222 ~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
+|+......+.++++ .+|+++.+|...
T Consensus 222 ~g~~~~~~~~~~~l~-~~g~~v~~~~~~ 248 (319)
T cd08242 222 TGSPSGLELALRLVR-PRGTVVLKSTYA 248 (319)
T ss_pred CCChHHHHHHHHHhh-cCCEEEEEcccC
Confidence 998665666666776 689999877654
No 74
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.8e-32 Score=235.70 Aligned_cols=242 Identities=33% Similarity=0.472 Sum_probs=203.5
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
||++++..++++ . +.++ +.+.|.+.+++|+||+.++++|+.|+....|.++ ...+.|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~-~~~~~~~~~g~~~~G~v~~~G~~v~ 76 (338)
T cd08254 1 MKAWRFHKGSKG-L-LVLE-EVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP-TLTKLPLTLGHEIAGTVVEVGAGVT 76 (338)
T ss_pred CeeEEEecCCCC-c-eEEe-ccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc-ccCCCCEeccccccEEEEEECCCCc
Confidence 999999999887 4 6777 7888999999999999999999999999988765 2345578899999999999999999
Q ss_pred CCCCCCEEEeccCc------------------cccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 81 KFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
++++||+|++.+.. ....+....|+|++|+.++.+.++++|++++.++++.++.+++|||++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~ 156 (338)
T cd08254 77 NFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHA 156 (338)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence 99999999873210 001122235899999999999999999999999999999999999999
Q ss_pred HH-hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc-----cCCCcc
Q 025278 143 LE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFD 216 (255)
Q Consensus 143 l~-~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-----~~~~~d 216 (255)
+. ...++++++|+|.| +|++|++++++|+.+ |.+++++++++++.+.++++|.+++++..+....+ ..+++|
T Consensus 157 l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~-G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D 234 (338)
T cd08254 157 VVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAM-GAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFD 234 (338)
T ss_pred HHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCce
Confidence 85 56799999999986 799999999999995 89999999999999999999999988876544322 134799
Q ss_pred EEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 217 VVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 217 ~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
++|||+|.......+.+.++ ++|+++.+|...
T Consensus 235 ~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~ 266 (338)
T cd08254 235 VIFDFVGTQPTFEDAQKAVK-PGGRIVVVGLGR 266 (338)
T ss_pred EEEECCCCHHHHHHHHHHhh-cCCEEEEECCCC
Confidence 99999997766666777777 789999998754
No 75
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1e-32 Score=238.21 Aligned_cols=237 Identities=28% Similarity=0.383 Sum_probs=195.5
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCC-CCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~-~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|||+++..++. ++++ +.+.|+|. ++||+||+.++++|+.|+....|.++ ..+|.++|||++|+|+++|+++
T Consensus 1 ~~a~~~~~~~~----~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v 72 (344)
T cd08284 1 MKAVVFKGPGD----VRVE-EVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP---STPGFVLGHEFVGEVVEVGPEV 72 (344)
T ss_pred CeeEEEecCCC----ceEE-eccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC---CCCCcccccceEEEEEeeCCCc
Confidence 99999987654 5888 89999885 99999999999999999999888764 3457889999999999999999
Q ss_pred CCCCCCCEEEeccCcccc----------------------CCCCCCcceeeEEeeeCC--ceEeCCCCCCHHhhhccchh
Q 025278 80 KKFKVGDEVYGDINEKAL----------------------DHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLA 135 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~----------------------~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~ 135 (255)
+++++||+|++.+...+. ......|+|++|+.++.+ .++++|+++++++++.++++
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~ 152 (344)
T cd08284 73 RTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI 152 (344)
T ss_pred cccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence 999999999986421100 001125899999999865 99999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCCccccc----
Q 025278 136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED---- 210 (255)
Q Consensus 136 ~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---- 210 (255)
++|||+++....+.++++|+|+| +|++|++++++|+.+ |+ ++++++.+++|.+.++++|+. .++.+..++..
T Consensus 153 ~~ta~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~ 229 (344)
T cd08284 153 LPTGYFGAKRAQVRPGDTVAVIG-CGPVGLCAVLSAQVL-GAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVRE 229 (344)
T ss_pred hHHHHhhhHhcCCccCCEEEEEC-CcHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHH
Confidence 99999999778889999999997 899999999999995 86 788888888999999999975 45655443321
Q ss_pred c--CCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 211 L--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 211 ~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
. .+++|++||++|+......+.+.++ .+|+++.+|...
T Consensus 230 ~~~~~~~dvvid~~~~~~~~~~~~~~l~-~~g~~v~~g~~~ 269 (344)
T cd08284 230 ATEGRGADVVLEAVGGAAALDLAFDLVR-PGGVISSVGVHT 269 (344)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHhcc-cCCEEEEECcCC
Confidence 1 2479999999997666666677776 789999999765
No 76
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2e-32 Score=239.20 Aligned_cols=237 Identities=27% Similarity=0.350 Sum_probs=192.0
Q ss_pred CeEEEEcccCCCccceEEeecccCCCC-CCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~-~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
||++++..+++ ++++ +.|.|++ .++||+||+.++++|++|++.+.|.++ ...|.++|||++|+|+++|+++
T Consensus 1 m~~~~~~~~~~----~~~~-~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~---~~~p~~~g~e~~G~V~~vG~~v 72 (375)
T cd08282 1 MKAVVYGGPGN----VAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG---AEPGLVLGHEAMGEVEEVGSAV 72 (375)
T ss_pred CceEEEecCCc----eeEE-eCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC---CCCCceeccccEEEEEEeCCCC
Confidence 89999987764 4888 8899986 799999999999999999999988764 3458899999999999999999
Q ss_pred CCCCCCCEEEeccCccccC----------------------------CCCCCcceeeEEeeeCC--ceEeCCCCCCHH--
Q 025278 80 KKFKVGDEVYGDINEKALD----------------------------HPKRNGSLAEYTAVEEN--LLALKPKNLSFV-- 127 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~~----------------------------~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~-- 127 (255)
..+++||+|++.....+.. ....+|+|+||+.++.. .++++|++++++
T Consensus 73 ~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~ 152 (375)
T cd08282 73 ESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEK 152 (375)
T ss_pred CcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhh
Confidence 9999999998732210000 01125899999999976 899999999988
Q ss_pred -hhhccchhHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCC
Q 025278 128 -EAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTK 205 (255)
Q Consensus 128 -~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~ 205 (255)
+++.++.+.+|+|+++....+++|++|+|.| +|++|++++|+|+++ |. ++++++++++|.+.++++|++ .+++.+
T Consensus 153 ~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~ 229 (375)
T cd08282 153 DDYLMLSDIFPTGWHGLELAGVQPGDTVAVFG-AGPVGLMAAYSAILR-GASRVYVVDHVPERLDLAESIGAI-PIDFSD 229 (375)
T ss_pred hheeeecchHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCe-EeccCc
Confidence 4677788889999999778899999999977 799999999999996 76 788888999999999999984 566655
Q ss_pred ccccc----c-CCCccEEEECCCCcc-----------ceeeeeeccccCCceEEEEeecc
Q 025278 206 ENIED----L-PEKFDVVFDAVGKMC-----------ISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 206 ~~~~~----~-~~~~d~vid~~G~~~-----------~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
.++.+ . .+++|++|||+|+.. ....+.+.++ ++|+++.+|...
T Consensus 230 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~~~g~~~ 288 (375)
T cd08282 230 GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTR-PGGGIGIVGVYV 288 (375)
T ss_pred ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhh-cCcEEEEEeccC
Confidence 43221 1 246999999999763 2344466666 789999998764
No 77
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=2.3e-32 Score=235.93 Aligned_cols=239 Identities=30% Similarity=0.419 Sum_probs=197.7
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++++++. ++++ +.+.|++.+++|+||+.++++|+.|+..+.|.++ ....|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~----~~~~-~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~--~~~~~~~~g~~~~G~V~~~G~~v~ 73 (343)
T cd08235 1 MKAAVLHGPND----VRLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT--DLKPPRILGHEIAGEIVEVGDGVT 73 (343)
T ss_pred CeEEEEecCCc----eEEE-EccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc--cCCCCcccccceEEEEEeeCCCCC
Confidence 89999998774 4888 7898999999999999999999999999888653 234577899999999999999999
Q ss_pred CCCCCCEEEeccCccc------------------cCCCCCCcceeeEEeeeCCc-----eEeCCCCCCHHhhhccchhHH
Q 025278 81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENL-----LALKPKNLSFVEAASLPLATE 137 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~-----~~~lp~~~~~~~aa~l~~~~~ 137 (255)
.+++||+|++...... ..+....|+|++|++++... ++++|+++++.+++.+ +++.
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ 152 (343)
T cd08235 74 GFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLA 152 (343)
T ss_pred CCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHH
Confidence 9999999998632100 00112468999999999988 9999999999888765 7788
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCccccc----c-
Q 025278 138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----L- 211 (255)
Q Consensus 138 ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~- 211 (255)
+||+++...++++|++|+|+| +|++|++++++|+.. |.+ ++++++++++.+.++++|.++++++++.++.+ .
T Consensus 153 ~a~~~l~~~~~~~g~~VlV~g-~g~vg~~~~~la~~~-g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~ 230 (343)
T cd08235 153 CCINAQRKAGIKPGDTVLVIG-AGPIGLLHAMLAKAS-GARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELT 230 (343)
T ss_pred HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHh
Confidence 999999767899999999997 799999999999995 888 88888999999999999999999887655432 1
Q ss_pred -CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 212 -PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 212 -~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
.+++|++|||+|+......+.+.++ .+|+++.+|....
T Consensus 231 ~~~~vd~vld~~~~~~~~~~~~~~l~-~~g~~v~~~~~~~ 269 (343)
T cd08235 231 DGRGADVVIVATGSPEAQAQALELVR-KGGRILFFGGLPK 269 (343)
T ss_pred CCcCCCEEEECCCChHHHHHHHHHhh-cCCEEEEEeccCC
Confidence 2469999999997655555566676 6899999987543
No 78
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=2.2e-32 Score=235.20 Aligned_cols=236 Identities=36% Similarity=0.490 Sum_probs=199.9
Q ss_pred CeEEEEcccCCCcc--ceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCC
Q 025278 1 MKAWVYKEYGNSQS--VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78 (255)
Q Consensus 1 mka~v~~~~~~~~~--~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~ 78 (255)
|||+++++++++.+ .++++ +.+.|++.+++|+||+.++++|++|+..+.+.++ ..+.|.++|||++|+|+++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~ 77 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDI-ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP--VPGQPKILGWDASGVVEAVGSE 77 (336)
T ss_pred CceEEecCCCCCCcccceeEc-cCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC--CCCCCcccccceEEEEEEcCCC
Confidence 89999999998721 46777 7888889999999999999999999998877654 2345778999999999999999
Q ss_pred CCCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHH-HhcccCC-----CC
Q 025278 79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSA-----GK 152 (255)
Q Consensus 79 v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~-----g~ 152 (255)
+..+++||+|+.... ....|+|++|+.++...++++|++++.++++.+++++.++|+++ +...+.+ |+
T Consensus 78 v~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~ 151 (336)
T cd08252 78 VTLFKVGDEVYYAGD------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGK 151 (336)
T ss_pred CCCCCCCCEEEEcCC------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCC
Confidence 999999999998531 01368999999999999999999999999999999999999997 5567776 99
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c-CCCccEEEECCCCcc
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L-PEKFDVVFDAVGKMC 226 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~-~~~~d~vid~~G~~~ 226 (255)
+|+|+|++|++|++++++|+.+ | .+++++++++++.++++++|+++++++.. ++.+ . .+++|++||++|+..
T Consensus 152 ~vlV~g~~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~d~vl~~~~~~~ 229 (336)
T cd08252 152 TLLIIGGAGGVGSIAIQLAKQL-TGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPVDYIFCLTDTDQ 229 (336)
T ss_pred EEEEEcCCchHHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCCCEEEEccCcHH
Confidence 9999998999999999999996 7 99999999999999999999999988764 2211 1 247999999999765
Q ss_pred ceeeeeeccccCCceEEEEeec
Q 025278 227 ISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 227 ~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
....+.+.++ .+|+++.+|..
T Consensus 230 ~~~~~~~~l~-~~g~~v~~g~~ 250 (336)
T cd08252 230 HWDAMAELIA-PQGHICLIVDP 250 (336)
T ss_pred HHHHHHHHhc-CCCEEEEecCC
Confidence 6666677776 68999999865
No 79
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=2.5e-32 Score=235.25 Aligned_cols=237 Identities=30% Similarity=0.396 Sum_probs=196.4
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||++++.++. +++. +.+.|++.++||+||+.++++|+.|+....+.++. ...|.++|+|++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~----~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~~~~~~g~e~~G~V~~~G~~v~ 73 (337)
T cd08261 1 MKALVCEKPGR----LEVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF--ASYPRILGHELSGEVVEVGEGVA 73 (337)
T ss_pred CeEEEEeCCCc----eEEE-ECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc--CCCCcccccccEEEEEEeCCCCC
Confidence 89999998764 4888 78999999999999999999999999998887643 24578899999999999999999
Q ss_pred CCCCCCEEEeccCccc-------c-----------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 81 KFKVGDEVYGDINEKA-------L-----------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~-------~-----------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
.+++||+|++.....+ . .+....|+|++|+.++.+ ++++|+++++++++.+ ..+++++++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~ 151 (337)
T cd08261 74 GLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHA 151 (337)
T ss_pred CCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHH
Confidence 9999999997421100 0 001136899999999999 9999999999888776 566788888
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc------CCCcc
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFD 216 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~~~~d 216 (255)
+...++++|++|||+| +|.+|++++|+|+.+ |.+++++++++++.++++++|+++++++...++.+. .+++|
T Consensus 152 ~~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~-g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd 229 (337)
T cd08261 152 VRRAGVTAGDTVLVVG-AGPIGLGVIQVAKAR-GARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGAD 229 (337)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCC
Confidence 8778899999999997 799999999999996 999999999999999999999999998876543221 24699
Q ss_pred EEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 217 VVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 217 ~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
++||++|+......+.+.++ .+|+++.+|...
T Consensus 230 ~vld~~g~~~~~~~~~~~l~-~~G~~i~~g~~~ 261 (337)
T cd08261 230 VVIDATGNPASMEEAVELVA-HGGRVVLVGLSK 261 (337)
T ss_pred EEEECCCCHHHHHHHHHHHh-cCCEEEEEcCCC
Confidence 99999987666666667776 789999998664
No 80
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=2.5e-32 Score=235.64 Aligned_cols=241 Identities=29% Similarity=0.337 Sum_probs=191.7
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCC-CCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
||++++..+++. +++. +.|.|+|.++||+||++++++|++|+.++.+.. ......+|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~---~~~~-~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v 76 (341)
T PRK05396 1 MKALVKLKAEPG---LWLT-DVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEV 76 (341)
T ss_pred CceEEEecCCCc---eEEE-ECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCC
Confidence 999999887754 6888 889999999999999999999999999876532 11223467789999999999999999
Q ss_pred CCCCCCCEEEeccCcccc------------------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHH
Q 025278 80 KKFKVGDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 141 (255)
+.+++||+|++.....+. .+...+|+|++|+.++.+.++++|+++++++++.+ ..+.++++
T Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~ 155 (341)
T PRK05396 77 TGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVH 155 (341)
T ss_pred CcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHH
Confidence 999999999986321110 01124689999999999999999999998877644 45555666
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c--CCC
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEK 214 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~--~~~ 214 (255)
++.. ...+|++|+|.| +|++|++++++|+++ |. ++++++.++++.++++++|+++++++++.++.+ . .++
T Consensus 156 ~~~~-~~~~g~~vlV~~-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 232 (341)
T PRK05396 156 TALS-FDLVGEDVLITG-AGPIGIMAAAVAKHV-GARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEG 232 (341)
T ss_pred HHHc-CCCCCCeEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCC
Confidence 5533 346899999987 799999999999995 87 577778888999999999999999887654322 1 257
Q ss_pred ccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 215 FDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 215 ~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+|++|||+|+......+.++++ ++|+++.+|....
T Consensus 233 ~d~v~d~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 267 (341)
T PRK05396 233 FDVGLEMSGAPSAFRQMLDNMN-HGGRIAMLGIPPG 267 (341)
T ss_pred CCEEEECCCCHHHHHHHHHHHh-cCCEEEEEecCCC
Confidence 9999999997666666677777 7899999997653
No 81
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=4.8e-32 Score=232.01 Aligned_cols=238 Identities=29% Similarity=0.359 Sum_probs=197.0
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
||++++..+.+ ++++++ +.|.|.+.++||+||+.++++|++|+..+.|.++. ....|.++|||++|+|+. +++..
T Consensus 1 ~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~--~~~~~ 75 (323)
T TIGR02823 1 KALVVEKEDGK-VSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV-VRSYPMIPGIDAAGTVVS--SEDPR 75 (323)
T ss_pred CeEEEccCCCC-cceeEe-ecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC-CCCCCccceeeeEEEEEe--cCCCC
Confidence 78999988876 678999 89999999999999999999999999999887632 234588899999999998 56678
Q ss_pred CCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH---hcccCCCC-EEEEE
Q 025278 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFSAGK-SILVL 157 (255)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~---~~~~~~g~-~VlI~ 157 (255)
+++||+|++.... .+....|+|++|+.++.+.++++|+++++++++.++..+.++|.++. ...+.+++ +|+|+
T Consensus 76 ~~~Gd~V~~~~~~---~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ 152 (323)
T TIGR02823 76 FREGDEVIVTGYG---LGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVT 152 (323)
T ss_pred CCCCCEEEEccCC---CCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEE
Confidence 9999999986421 11223689999999999999999999999999999988888988763 34478898 99999
Q ss_pred cCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccc--ccc-CCCccEEEECCCCccceeeeeec
Q 025278 158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI--EDL-PEKFDVVFDAVGKMCISIVYQKC 234 (255)
Q Consensus 158 ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~~~-~~~~d~vid~~G~~~~~~~~~~~ 234 (255)
|++|++|++++++|+.+ |+++++++.++++.+.++++|++.+++..+.+. ... ..++|+++||+|+.. ...+..+
T Consensus 153 g~~g~vg~~~~~la~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~ 230 (323)
T TIGR02823 153 GATGGVGSLAVAILSKL-GYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGHT-LANVLAQ 230 (323)
T ss_pred cCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHHH-HHHHHHH
Confidence 98899999999999996 999999988888889999999998888754332 111 235999999999764 4556777
Q ss_pred cccCCceEEEEeeccC
Q 025278 235 DKFQEKSLINFGLFRQ 250 (255)
Q Consensus 235 ~~~~~G~~v~~G~~~~ 250 (255)
++ .+|+++.+|..++
T Consensus 231 l~-~~G~~v~~g~~~~ 245 (323)
T TIGR02823 231 LK-YGGAVAACGLAGG 245 (323)
T ss_pred hC-CCCEEEEEcccCC
Confidence 77 7899999997643
No 82
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.9e-32 Score=235.52 Aligned_cols=239 Identities=25% Similarity=0.272 Sum_probs=192.6
Q ss_pred CeEEEEcccCCCccceEEeecccCCCC-CCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~-~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
||+++++++++. +++ +.|.|+| .++||+||+.++++|++|+..+.|.++ ...|.++|||++|+|+++|+++
T Consensus 1 m~~~~~~~~~~~----~~~-~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v 72 (345)
T cd08287 1 MRATVIHGPGDI----RVE-EVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP---TRAPAPIGHEFVGVVEEVGSEV 72 (345)
T ss_pred CceeEEecCCce----eEE-eCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC---CCCCcccccceEEEEEEeCCCC
Confidence 999999977654 888 7899986 899999999999999999998888764 2457899999999999999999
Q ss_pred CCCCCCCEEEeccCc------------------cccCCCCCCcceeeEEeeeCC--ceEeCCCCCCHHhhh-----ccch
Q 025278 80 KKFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAA-----SLPL 134 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa-----~l~~ 134 (255)
..+++||+|++.... ....+...+|+|++|+.++.+ .++++|++++++.+. ++..
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~ 152 (345)
T cd08287 73 TSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSD 152 (345)
T ss_pred CccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhc
Confidence 999999999872111 001112345899999999975 999999999872211 2235
Q ss_pred hHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCccccc---
Q 025278 135 ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED--- 210 (255)
Q Consensus 135 ~~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~--- 210 (255)
.+.+||+++....+++|++|+|.| +|++|++++++|+++ |.+ ++++++++++.+.++++|++.++++...++.+
T Consensus 153 ~~~~a~~~~~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~ 230 (345)
T cd08287 153 VMGTGHHAAVSAGVRPGSTVVVVG-DGAVGLCAVLAAKRL-GAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVR 230 (345)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHH
Confidence 678899998778899999999977 899999999999996 886 67777888899999999999999987654322
Q ss_pred -c--CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 211 -L--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 211 -~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
. .+++|+++|++|+......+.+.++ .+|+++.+|....
T Consensus 231 ~~~~~~~~d~il~~~g~~~~~~~~~~~l~-~~g~~v~~g~~~~ 272 (345)
T cd08287 231 ELTGGVGADAVLECVGTQESMEQAIAIAR-PGGRVGYVGVPHG 272 (345)
T ss_pred HhcCCCCCCEEEECCCCHHHHHHHHHhhc-cCCEEEEecccCC
Confidence 1 2479999999997666666777776 6899999987653
No 83
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.4e-32 Score=236.38 Aligned_cols=237 Identities=43% Similarity=0.621 Sum_probs=196.3
Q ss_pred CeEEEEcccCCCccceEEeecccCCCC-CCCeEEEEEeEeecChHhHHHHcCCCCC-------------CCCCCCccccc
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSA-------------TDSPLPTIPGY 66 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~-~~~eV~V~v~~~~i~~~D~~~~~g~~~~-------------~~~~~p~~~G~ 66 (255)
|||+++++++++.+.++++ +++.|+| .++||+||++++++|++|+....|.... .....|.++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 79 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGR 79 (350)
T ss_pred CceEEecccCCCcceeeec-ccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecc
Confidence 9999999888753457888 8999999 4999999999999999999988774210 02355889999
Q ss_pred ceEEEEEEeCCCCCCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-h
Q 025278 67 DVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-R 145 (255)
Q Consensus 67 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~ 145 (255)
|++|+|+++|++++++++||||++.... ...|+|++|+.++.+.++++|++++.++++.+++++.|+|+++. .
T Consensus 80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~ 153 (350)
T cd08248 80 DCSGVVVDIGSGVKSFEIGDEVWGAVPP------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNV 153 (350)
T ss_pred eeEEEEEecCCCcccCCCCCEEEEecCC------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHh
Confidence 9999999999999999999999986421 13589999999999999999999999999999999999999984 4
Q ss_pred cccC----CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc---CCCccEE
Q 025278 146 SAFS----AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---PEKFDVV 218 (255)
Q Consensus 146 ~~~~----~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d~v 218 (255)
..+. +|++|+|+|++|++|++++++|+.+ |+++++++++ ++.+.++++|.+.+++..+.++.+. .+++|++
T Consensus 154 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~v 231 (350)
T cd08248 154 GGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAW-GAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVI 231 (350)
T ss_pred ccCCCccCCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHhcCCCCEE
Confidence 5554 4999999998999999999999996 9998887755 6778889999988888765433221 2579999
Q ss_pred EECCCCccceeeeeeccccCCceEEEEeec
Q 025278 219 FDAVGKMCISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 219 id~~G~~~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
||++|+. ....+.++++ ++|+++.+|..
T Consensus 232 i~~~g~~-~~~~~~~~l~-~~G~~v~~g~~ 259 (350)
T cd08248 232 LDTVGGD-TEKWALKLLK-KGGTYVTLVSP 259 (350)
T ss_pred EECCChH-HHHHHHHHhc-cCCEEEEecCC
Confidence 9999977 4555677777 78999999854
No 84
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.8e-32 Score=235.69 Aligned_cols=239 Identities=32% Similarity=0.428 Sum_probs=198.8
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||++++.+++. ++++ +.+.|++.++|++||+.++++|++|+....|.++ ..++|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~--~~~~~~~~g~e~~G~v~~~g~~~~ 74 (334)
T PRK13771 1 MKAVILPGFKQG---YRIE-EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYP--RMKYPVILGHEVVGTVEEVGENVK 74 (334)
T ss_pred CeeEEEcCCCCC---cEEE-eCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCC--CCCCCeeccccceEEEEEeCCCCc
Confidence 999999998874 6888 7899999999999999999999999998888764 235578899999999999999998
Q ss_pred CCCCCCEEEeccCccc------------------cCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
.+++||+|++.....+ ..+....|+|++|+.++.+.++++|+++++.+++.+++++.++|++
T Consensus 75 ~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~ 154 (334)
T PRK13771 75 GFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG 154 (334)
T ss_pred cCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHH
Confidence 8999999998632100 0111236899999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCc--cccccCCCccEEEE
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE--NIEDLPEKFDVVFD 220 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~~~d~vid 220 (255)
+....++++++|+|+|++|.+|++++++|+.+ |.+++++++++++++.++++ +++++++.+. ..... .++|++||
T Consensus 155 ~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~-g~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~-~~~d~~ld 231 (334)
T PRK13771 155 LRRAGVKKGETVLVTGAGGGVGIHAIQVAKAL-GAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKKI-GGADIVIE 231 (334)
T ss_pred HHhcCCCCCCEEEEECCCccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH-HHHhcCchhHHHHHHhc-CCCcEEEE
Confidence 96668899999999998899999999999996 99999999999999999888 7777765411 11122 37999999
Q ss_pred CCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 221 AVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 221 ~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
|+|+.. ...+++.++ .+|+++.+|....
T Consensus 232 ~~g~~~-~~~~~~~l~-~~G~~v~~g~~~~ 259 (334)
T PRK13771 232 TVGTPT-LEESLRSLN-MGGKIIQIGNVDP 259 (334)
T ss_pred cCChHH-HHHHHHHHh-cCCEEEEEeccCC
Confidence 999754 455567777 7899999997543
No 85
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=5.2e-32 Score=232.26 Aligned_cols=240 Identities=35% Similarity=0.428 Sum_probs=198.7
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++..+++. ++++ ++|.|++.++||+|++.++++|++|+..+.|.++. ...|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~~G~~v~ 74 (332)
T cd08259 1 MKAAILHKPNKP---LQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR--GKYPLILGHEIVGTVEEVGEGVE 74 (332)
T ss_pred CeEEEEecCCCc---eEEE-EccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC--CCCCeeccccceEEEEEECCCCc
Confidence 999999874433 6888 89999999999999999999999999999887642 34578999999999999999999
Q ss_pred CCCCCCEEEeccCccc------------------cCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
.+++||+|++.....+ ..+....|+|++|++++...++++|+++++++++.+++++.+||++
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~ 154 (332)
T cd08259 75 RFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA 154 (332)
T ss_pred cCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHH
Confidence 9999999998642110 0111236899999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCC--ccccccCCCccEEEE
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVFD 220 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~d~vid 220 (255)
++...+.++++++|+|++|++|++++++++.. |.+++.+++++++.+.++++|.+.+++..+ ..+.. ..++|++||
T Consensus 155 l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~v~~ 232 (332)
T cd08259 155 LKRAGVKKGDTVLVTGAGGGVGIHAIQLAKAL-GARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKK-LGGADVVIE 232 (332)
T ss_pred HHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCcEEEecHHHHHHHHh-ccCCCEEEE
Confidence 97688899999999999999999999999995 999999999999999999899888887653 11111 237999999
Q ss_pred CCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 221 AVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 221 ~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
++|... ...+.+.++ .+|+++.+|....
T Consensus 233 ~~g~~~-~~~~~~~~~-~~g~~v~~g~~~~ 260 (332)
T cd08259 233 LVGSPT-IEESLRSLN-KGGRLVLIGNVTP 260 (332)
T ss_pred CCChHH-HHHHHHHhh-cCCEEEEEcCCCC
Confidence 999765 344455565 6899999987543
No 86
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=4.1e-32 Score=234.40 Aligned_cols=238 Identities=29% Similarity=0.425 Sum_probs=197.2
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++++++. ++++ +.+.|++.++||+||+.++++|+.|+....+.++ ...|.++|+|++|+|+.+|+++.
T Consensus 1 ~~a~~~~~~~~----l~~~-~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~---~~~~~~~g~~~~G~V~~~g~~v~ 72 (343)
T cd08236 1 MKALVLTGPGD----LRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA---YHPPLVLGHEFSGTVEEVGSGVD 72 (343)
T ss_pred CeeEEEecCCc----eeEE-ecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC---CCCCcccCcceEEEEEEECCCCC
Confidence 99999998764 4787 7899999999999999999999999998877642 24577899999999999999999
Q ss_pred CCCCCCEEEeccCcc------------------ccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 81 KFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
.+++||+|++..... ...+....|+|++|+.++.+.++++|+++++++++.+ ..+.+||++
T Consensus 73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~ 151 (343)
T cd08236 73 DLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHA 151 (343)
T ss_pred cCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHH
Confidence 999999999863110 0011124689999999999999999999999888877 567899999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCccccc---c--CCCcc
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED---L--PEKFD 216 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~--~~~~d 216 (255)
+....++++++|+|+| +|.+|++++++|+.+ |.+ ++++++++++.++++++|++.++++.+....+ . .+++|
T Consensus 152 l~~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~-G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~d 229 (343)
T cd08236 152 VRLAGITLGDTVVVIG-AGTIGLLAIQWLKIL-GAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGAD 229 (343)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCCCC
Confidence 9877889999999997 799999999999996 887 88889899999999999999998876544211 1 23699
Q ss_pred EEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 217 VVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 217 ~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
++|||+|.......+.+.++ .+|+++.+|...+
T Consensus 230 ~vld~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 262 (343)
T cd08236 230 LVIEAAGSPATIEQALALAR-PGGKVVLVGIPYG 262 (343)
T ss_pred EEEECCCCHHHHHHHHHHhh-cCCEEEEEcccCC
Confidence 99999987666666677777 7899999996643
No 87
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=7.2e-32 Score=230.00 Aligned_cols=236 Identities=30% Similarity=0.395 Sum_probs=197.1
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
||++++..++.. ..++++ +.+.|++.++||+||+.++++|+.|+....+.++ ....|.++|||++|+|+++|+ .
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~--~ 74 (320)
T cd08243 1 MKAIVIEQPGGP-EVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP--SVKFPRVLGIEAVGEVEEAPG--G 74 (320)
T ss_pred CeEEEEcCCCCc-cceEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCccccceeEEEEEEecC--C
Confidence 899999987765 567777 7777889999999999999999999999888653 234578899999999999995 5
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga 159 (255)
.+++||+|++..... +....|+|++|+.++...++++|+++++++++.+++++.+||+++. ...+++|++|+|+|+
T Consensus 75 ~~~~Gd~V~~~~~~~---~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga 151 (320)
T cd08243 75 TFTPGQRVATAMGGM---GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGG 151 (320)
T ss_pred CCCCCCEEEEecCCC---CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 799999999875321 1223589999999999999999999999999999999999999985 467899999999998
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccc----ccCCCccEEEECCCCccceeeeeecc
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE----DLPEKFDVVFDAVGKMCISIVYQKCD 235 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~----~~~~~~d~vid~~G~~~~~~~~~~~~ 235 (255)
+|++|++++++|+.+ |++++.++.++++.+.++++|++++++.. .++. ...+++|++||++|+. ....+.+++
T Consensus 152 ~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~i~~~~~~~d~vl~~~~~~-~~~~~~~~l 228 (320)
T cd08243 152 TSSVGLAALKLAKAL-GATVTATTRSPERAALLKELGADEVVIDD-GAIAEQLRAAPGGFDKVLELVGTA-TLKDSLRHL 228 (320)
T ss_pred CChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEecC-ccHHHHHHHhCCCceEEEECCChH-HHHHHHHHh
Confidence 899999999999995 99999999999999999999998887542 2221 1235799999999974 445556777
Q ss_pred ccCCceEEEEeecc
Q 025278 236 KFQEKSLINFGLFR 249 (255)
Q Consensus 236 ~~~~G~~v~~G~~~ 249 (255)
+ .+|+++.+|..+
T Consensus 229 ~-~~g~~v~~g~~~ 241 (320)
T cd08243 229 R-PGGIVCMTGLLG 241 (320)
T ss_pred c-cCCEEEEEccCC
Confidence 6 689999999753
No 88
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=7.9e-32 Score=231.68 Aligned_cols=237 Identities=39% Similarity=0.521 Sum_probs=196.8
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++.++++ ++++ +.+.|++.++||+||+.++++|+.|+....|.++. .+|.++|+|++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~----~~~~-~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~---~~p~~~g~~~~G~v~~vG~~v~ 72 (334)
T cd08234 1 MKALVYEGPGE----LEVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA---APPLVPGHEFAGVVVAVGSKVT 72 (334)
T ss_pred CeeEEecCCCc----eEEE-eccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC---CCCcccccceEEEEEEeCCCCC
Confidence 99999998774 4888 88999999999999999999999999998887642 3678999999999999999999
Q ss_pred CCCCCCEEEeccCcccc------------------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 81 KFKVGDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
++++||+|++.....+. .+....|+|++|++++.+.++++|+++++.+++.+ ..+.+++++
T Consensus 73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~ 151 (334)
T cd08234 73 GFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHG 151 (334)
T ss_pred CCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHH
Confidence 99999999873221100 11124689999999999999999999999888765 677789998
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCccccc----cCCCccE
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----LPEKFDV 217 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~~~~~d~ 217 (255)
++..++++|++|+|+| +|.+|.+++++|+.. |++ ++++++++++.+.++++|++.++++.+.+... ..+++|+
T Consensus 152 l~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~ 229 (334)
T cd08234 152 LDLLGIKPGDSVLVFG-AGPIGLLLAQLLKLN-GASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDV 229 (334)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcE
Confidence 8778899999999997 799999999999995 887 78888999999999999998888876554321 2357999
Q ss_pred EEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 218 VFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 218 vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
+||++|.......+.+.++ ++|+++.+|...
T Consensus 230 v~~~~~~~~~~~~~~~~l~-~~G~~v~~g~~~ 260 (334)
T cd08234 230 VIEATGVPKTLEQAIEYAR-RGGTVLVFGVYA 260 (334)
T ss_pred EEECCCChHHHHHHHHHHh-cCCEEEEEecCC
Confidence 9999987655555666676 789999998765
No 89
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=3.9e-32 Score=232.82 Aligned_cols=235 Identities=35% Similarity=0.522 Sum_probs=192.0
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
||++++..++ . ..++++ +.+.|+++++||+||+.++++|++|+..+.+. + ...+|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~-~-~~~~~~-~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~--~~~~~~~~g~e~~G~v~~vG~~v~ 74 (325)
T cd08264 1 MKALVFEKSG-I-ENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-K--VKPMPHIPGAEFAGVVEEVGDHVK 74 (325)
T ss_pred CeeEEeccCC-C-CceEEE-eccCCCCCCCeEEEEEEEEEechHHHHHHhCC-C--CCCCCeecccceeEEEEEECCCCC
Confidence 9999998776 3 557888 78888899999999999999999999887642 1 123577899999999999999999
Q ss_pred CCCCCCEEEeccCcccc------------------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 81 KFKVGDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
.+++||+|+....-.+. .+....|+|++|+.++.+.++++|+++++++++.+++++.+||++
T Consensus 75 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 154 (325)
T cd08264 75 GVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA 154 (325)
T ss_pred CCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHH
Confidence 99999999976321000 011136899999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCc--cccccCCCccEEEE
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE--NIEDLPEKFDVVFD 220 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~~~d~vid 220 (255)
+...++++|++|+|+|++|++|++++++|+++ |.+++++++ .+.++++|+++++++.+. .+....+++|+++|
T Consensus 155 l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~-G~~v~~~~~----~~~~~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~ 229 (325)
T cd08264 155 LKTAGLGPGETVVVFGASGNTGIFAVQLAKMM-GAEVIAVSR----KDWLKEFGADEVVDYDEVEEKVKEITKMADVVIN 229 (325)
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeH----HHHHHHhCCCeeecchHHHHHHHHHhCCCCEEEE
Confidence 97788999999999998899999999999996 899888763 366788999988887531 11212267999999
Q ss_pred CCCCccceeeeeeccccCCceEEEEeec
Q 025278 221 AVGKMCISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 221 ~~G~~~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
++|+. ....+.+.++ .+|+++.+|..
T Consensus 230 ~~g~~-~~~~~~~~l~-~~g~~v~~g~~ 255 (325)
T cd08264 230 SLGSS-FWDLSLSVLG-RGGRLVTFGTL 255 (325)
T ss_pred CCCHH-HHHHHHHhhc-cCCEEEEEecC
Confidence 99974 4556677777 78999999974
No 90
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.2e-31 Score=226.84 Aligned_cols=243 Identities=34% Similarity=0.434 Sum_probs=201.2
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||++++..+.. ..++++ +.+.|.+.++|++||+.++++|++|+....|.++. ..+.|.++|||++|+|+++|++++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~G~~~~ 77 (336)
T cd08276 1 MKAWRLSGGGGL-DNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPP-PVKDPLIPLSDGAGEVVAVGEGVT 77 (336)
T ss_pred CeEEEEeccCCC-cceEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCC-CCCCCcccccceeEEEEEeCCCCc
Confidence 999999977654 557888 78888899999999999999999999998887643 234678899999999999999999
Q ss_pred CCCCCCEEEeccCcc------------ccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcc
Q 025278 81 KFKVGDEVYGDINEK------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSA 147 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~ 147 (255)
++++||+|++..... ...+....|+|++|+.++.+.++++|+++++.+++.+++++.+||+++. ...
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~ 157 (336)
T cd08276 78 RFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGP 157 (336)
T ss_pred CCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcC
Confidence 999999999864211 1122233688999999999999999999999999999999999999984 578
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCC-ccccc----c--CCCccEEEE
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED----L--PEKFDVVFD 220 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~----~--~~~~d~vid 220 (255)
+++|++|+|+| +|++|++++++|+++ |+++++++.++++++.++++|.+.+++... .++.+ . .+++|++||
T Consensus 158 ~~~g~~vli~g-~g~~g~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 235 (336)
T cd08276 158 LKPGDTVLVQG-TGGVSLFALQFAKAA-GARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVE 235 (336)
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEE
Confidence 99999999996 899999999999996 999999999999999999899999988765 33322 1 247999999
Q ss_pred CCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 221 AVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 221 ~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
++|... ...+.++++ .+|+++.+|....
T Consensus 236 ~~~~~~-~~~~~~~l~-~~G~~v~~g~~~~ 263 (336)
T cd08276 236 VGGPGT-LAQSIKAVA-PGGVISLIGFLSG 263 (336)
T ss_pred CCChHH-HHHHHHhhc-CCCEEEEEccCCC
Confidence 998543 444566666 6899999997654
No 91
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=3.2e-31 Score=226.90 Aligned_cols=238 Identities=27% Similarity=0.315 Sum_probs=193.5
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||++++.+|++ +.++++ +.|.|+|+++||+||+.++++|++|...+.|.++. ...+|.++|||++|+|++ ++++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~--~~~~ 75 (324)
T cd08288 1 FKALVLEKDDGG-TSAELR-ELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI-VRTFPLVPGIDLAGTVVE--SSSP 75 (324)
T ss_pred CeeEEEeccCCC-cceEEE-ECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc-cCCCCCccccceEEEEEe--CCCC
Confidence 999999998876 668999 89999999999999999999999999988876521 223578899999999998 7777
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH---hcccC-CCCEEEE
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFS-AGKSILV 156 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~---~~~~~-~g~~VlI 156 (255)
++++||+|++.... .+....|+|++|+.++.+.++++|++++.++++.++.++++++.++. ..... ++++|+|
T Consensus 76 ~~~~Gd~V~~~~~~---~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI 152 (324)
T cd08288 76 RFKPGDRVVLTGWG---VGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLV 152 (324)
T ss_pred CCCCCCEEEECCcc---CCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEE
Confidence 89999999985310 11113689999999999999999999999999999988888887764 44555 6789999
Q ss_pred EcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccc--cc-CCCccEEEECCCCccceeeeee
Q 025278 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE--DL-PEKFDVVFDAVGKMCISIVYQK 233 (255)
Q Consensus 157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~--~~-~~~~d~vid~~G~~~~~~~~~~ 233 (255)
+|++|++|++++|+|+.+ |+++++++.+++|.+.++++|+++++++.+.... .. .+++|.+||++|+.. ...+..
T Consensus 153 ~ga~g~vg~~~~~~A~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~ 230 (324)
T cd08288 153 TGAAGGVGSVAVALLARL-GYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHT-LANVLA 230 (324)
T ss_pred ECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHHH-HHHHHH
Confidence 998899999999999996 9999999999999999999999999987653321 11 236899999999743 223344
Q ss_pred ccccCCceEEEEeecc
Q 025278 234 CDKFQEKSLINFGLFR 249 (255)
Q Consensus 234 ~~~~~~G~~v~~G~~~ 249 (255)
..+ .+|+++.+|.+.
T Consensus 231 ~~~-~~g~~~~~G~~~ 245 (324)
T cd08288 231 QTR-YGGAVAACGLAG 245 (324)
T ss_pred Hhc-CCCEEEEEEecC
Confidence 444 569999999864
No 92
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.6e-31 Score=226.14 Aligned_cols=240 Identities=29% Similarity=0.432 Sum_probs=193.7
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
||+++++++++ ..++++ +++.|++.++||+||+.++++|++|+....+.+. ....|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~--~~~~~~-~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~--~~~~p~~~G~e~~G~V~~vG~~v~ 75 (306)
T cd08258 1 MKALVKTGPGP--GNVELR-EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD--PVETPVVLGHEFSGTIVEVGPDVE 75 (306)
T ss_pred CeeEEEecCCC--CceEEe-ecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC--cCCCCeeeccceEEEEEEECCCcC
Confidence 89999987542 457888 8999999999999999999999999998888652 234578899999999999999999
Q ss_pred CCCCCCEEEeccCccc-------------------cCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHH
Q 025278 81 KFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 141 (255)
.+++||+|++...... ..+....|+|++|++++...++++|+++++++++ ++....++|+
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~ 154 (306)
T cd08258 76 GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH 154 (306)
T ss_pred cCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence 9999999998642100 0011235899999999999999999999998876 7777788999
Q ss_pred HH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEe--cChhhHHHHHHcCCCEEEcCCCcccccc------C
Q 025278 142 GL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT--SSTAKLDLLRSLGADLAIDYTKENIEDL------P 212 (255)
Q Consensus 142 ~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~ 212 (255)
++ ....++++++|+|.| +|++|++++++|+++ |.+++.+. .++++.+.++++|++++ ++...++.+. .
T Consensus 155 ~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~-G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~ 231 (306)
T cd08258 155 AVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQ-GATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDG 231 (306)
T ss_pred HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCC
Confidence 98 567889999999977 899999999999996 89987763 35567888899999888 7765543221 2
Q ss_pred CCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 213 EKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 213 ~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+++|++||++|+........+.++ .+|+++.+|...+
T Consensus 232 ~~vd~vld~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 268 (306)
T cd08258 232 DGADVVIECSGAVPALEQALELLR-KGGRIVQVGIFGP 268 (306)
T ss_pred CCCCEEEECCCChHHHHHHHHHhh-cCCEEEEEcccCC
Confidence 479999999986655555566666 7899999999763
No 93
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=3.6e-31 Score=225.24 Aligned_cols=235 Identities=39% Similarity=0.540 Sum_probs=198.9
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
||++++..++.+ ..++++ +.+.|.+.++|++||+.++++|++|+....+.++ .....|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~v~~vg~~~~ 77 (323)
T cd05276 1 MKAIVIKEPGGP-EVLELG-EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYP-PPPGASDILGLEVAGVVVAVGPGVT 77 (323)
T ss_pred CeEEEEecCCCc-ccceEE-ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCC-CCCCCCCcccceeEEEEEeeCCCCC
Confidence 999999987766 567887 7777889999999999999999999998877653 2334578999999999999999999
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga 159 (255)
.+++||+|++.. .+|+|++|+.++.+.++++|+++++.+++.++.++.++|+++. ...+.++++|+|+|+
T Consensus 78 ~~~~Gd~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~ 148 (323)
T cd05276 78 GWKVGDRVCALL---------AGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGG 148 (323)
T ss_pred CCCCCCEEEEec---------CCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 999999999864 2589999999999999999999999999999999999999984 578899999999998
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc------CCCccEEEECCCCccceeeeee
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGKMCISIVYQK 233 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~~~~d~vid~~G~~~~~~~~~~ 233 (255)
+|++|++++++++.. |++++++++++++++.++++|++.+++....++.+. .+++|++||++|+.. ......
T Consensus 149 ~~~ig~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~ 226 (323)
T cd05276 149 ASGVGTAAIQLAKAL-GARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDY-LARNLR 226 (323)
T ss_pred cChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHH
Confidence 899999999999995 999999999999999999999888887765432221 247999999999765 333455
Q ss_pred ccccCCceEEEEeeccC
Q 025278 234 CDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 234 ~~~~~~G~~v~~G~~~~ 250 (255)
+++ .+|+++.+|..+.
T Consensus 227 ~~~-~~g~~i~~~~~~~ 242 (323)
T cd05276 227 ALA-PDGRLVLIGLLGG 242 (323)
T ss_pred hhc-cCCEEEEEecCCC
Confidence 555 6899999987643
No 94
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.6e-31 Score=228.64 Aligned_cols=239 Identities=24% Similarity=0.360 Sum_probs=189.8
Q ss_pred EEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcC-CCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 3 AWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLG-AFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 3 a~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g-~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
|+++++++. ++++ +.+.|+|.++||+||+.++++|+.|++.+.+ ..+......|.++|+|++|+|+++|+++++
T Consensus 1 ~~~~~~~~~----~~~~-~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~ 75 (343)
T cd05285 1 AAVLHGPGD----LRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTH 75 (343)
T ss_pred CceEecCCc----eeEE-ECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCC
Confidence 356776644 5888 8899999999999999999999999987643 221111235778999999999999999999
Q ss_pred CCCCCEEEeccCccc------------------c-CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 82 FKVGDEVYGDINEKA------------------L-DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 82 ~~~Gd~V~~~~~~~~------------------~-~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
+++||+|++.+...+ . ......|+|++|++++.+.++++|+++++++++.+ .++.+||++
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~ 154 (343)
T cd05285 76 LKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHA 154 (343)
T ss_pred CCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHH
Confidence 999999986321100 0 00113689999999999999999999999888766 577789998
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCccc---c----cc--C
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENI---E----DL--P 212 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~----~~--~ 212 (255)
++..++++|++|+|.| +|++|++++++|+.+ |.+ ++++++++++.++++++|++.++++++.++ . .. .
T Consensus 155 ~~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 232 (343)
T cd05285 155 CRRAGVRPGDTVLVFG-AGPIGLLTAAVAKAF-GATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGG 232 (343)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCC
Confidence 8888999999999987 799999999999996 887 888888999999999999999998876543 1 11 2
Q ss_pred CCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 213 EKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 213 ~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+++|++|||+|+..........++ .+|+++.+|....
T Consensus 233 ~~~d~vld~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 269 (343)
T cd05285 233 KGPDVVIECTGAESCIQTAIYATR-PGGTVVLVGMGKP 269 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhh-cCCEEEEEccCCC
Confidence 469999999997644555566666 6899999986543
No 95
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=5.5e-31 Score=225.25 Aligned_cols=224 Identities=46% Similarity=0.653 Sum_probs=179.6
Q ss_pred EEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCC--CCCCcccccceEEE---EEEeC-CCCCCCCCCCEEEe
Q 025278 17 KFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD--SPLPTIPGYDVAGV---VEKVG-SQVKKFKVGDEVYG 90 (255)
Q Consensus 17 ~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~--~~~p~~~G~e~~G~---V~~~G-~~v~~~~~Gd~V~~ 90 (255)
.+.++.+.|.|.++++++++.++++|+.|+.+..|.+.... ..+|.+++.++.|+ +...| ..+.....||++..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 44437899999999999999999999999999998865322 25675555555544 44444 23344666766665
Q ss_pred ccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hc------ccCCCCEEEEEcCCchH
Q 025278 91 DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RS------AFSAGKSILVLGGAGGV 163 (255)
Q Consensus 91 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~------~~~~g~~VlI~ga~g~~ 163 (255)
.. ..|+|+||.++|...++++|+++++++++.+|.+..|||.++. .. +.++|+.|||+||+|++
T Consensus 100 ~~---------~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggV 170 (347)
T KOG1198|consen 100 FL---------SSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGV 170 (347)
T ss_pred cc---------CCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHH
Confidence 44 3799999999999999999999999999999999999999995 56 69999999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc-----CCCccEEEECCCCccceeeeeeccccC
Q 025278 164 GTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVGKMCISIVYQKCDKFQ 238 (255)
Q Consensus 164 G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-----~~~~d~vid~~G~~~~~~~~~~~~~~~ 238 (255)
|++++|+|++. ++..+++.++++++++++++|+++++||+++++.+. .+++|+||||+|+.... ....+.. .
T Consensus 171 G~~aiQlAk~~-~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~~~~-~~~~~l~-~ 247 (347)
T KOG1198|consen 171 GTAAIQLAKHA-GAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGSTLT-KSLSCLL-K 247 (347)
T ss_pred HHHHHHHHHhc-CCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCCccc-cchhhhc-c
Confidence 99999999996 678888999999999999999999999999887654 34799999999986433 3344443 4
Q ss_pred CceEEEEeeccCCC
Q 025278 239 EKSLINFGLFRQEV 252 (255)
Q Consensus 239 ~G~~v~~G~~~~~~ 252 (255)
+|+...++..++..
T Consensus 248 ~g~~~~i~~~~~~~ 261 (347)
T KOG1198|consen 248 GGGGAYIGLVGDEL 261 (347)
T ss_pred CCceEEEEeccccc
Confidence 57666666666543
No 96
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.1e-30 Score=224.26 Aligned_cols=239 Identities=31% Similarity=0.389 Sum_probs=198.1
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
||+++.++|.. ++++ +.|.|.+.++|++|++.++++|++|+..+.|.++ ...+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~p~~~g~e~~G~v~~~g~~~~~ 74 (330)
T cd08245 1 KAAVVHAAGGP---LEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG--GSKYPLVPGHEIVGEVVEVGAGVEG 74 (330)
T ss_pred CeEEEecCCCC---ceEE-eccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC--CCCCCcccCccceEEEEEECCCCcc
Confidence 78999988543 6888 8899999999999999999999999999988763 2346788999999999999999999
Q ss_pred CCCCCEEEecc-----Ccccc--------------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 82 FKVGDEVYGDI-----NEKAL--------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 82 ~~~Gd~V~~~~-----~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
+++||+|+..+ +.... .+....|+|++|+.++...++++|+++++.+++.+++...+||++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~ 154 (330)
T cd08245 75 RKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA 154 (330)
T ss_pred cccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence 99999998421 10000 012236899999999999999999999999999899999999999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc-cCCCccEEEEC
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-LPEKFDVVFDA 221 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~~~~~d~vid~ 221 (255)
+....++++++|+|+| +|++|++++++|+.+ |.+++++++++++.+.++++|++.+++........ ..+++|++||+
T Consensus 155 l~~~~~~~~~~vlI~g-~g~iG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (330)
T cd08245 155 LRDAGPRPGERVAVLG-IGGLGHLAVQYARAM-GFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVT 232 (330)
T ss_pred HHhhCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEEC
Confidence 9778899999999997 788999999999995 99999999999999999999998888765433221 22479999999
Q ss_pred CCCccceeeeeeccccCCceEEEEeecc
Q 025278 222 VGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 222 ~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
++.......+.+.++ .+|+++.+|...
T Consensus 233 ~~~~~~~~~~~~~l~-~~G~~i~~~~~~ 259 (330)
T cd08245 233 VVSGAAAEAALGGLR-RGGRIVLVGLPE 259 (330)
T ss_pred CCcHHHHHHHHHhcc-cCCEEEEECCCC
Confidence 887666666677777 689999998653
No 97
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=6.4e-31 Score=226.61 Aligned_cols=236 Identities=27% Similarity=0.413 Sum_probs=186.1
Q ss_pred EEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHc-CCCCCCCCCCCcccccceEEEEEEeCCCCCCCC
Q 025278 5 VYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83 (255)
Q Consensus 5 v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~ 83 (255)
+++++++ ++++ +.+.|++.++||+||+.++++|++|+..++ +.++......|.++|||++|+|+++|+++++++
T Consensus 2 ~~~~~~~----~~~~-~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~ 76 (339)
T cd08232 2 VIHAAGD----LRVE-ERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLA 76 (339)
T ss_pred eeccCCc----eEEE-EcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCC
Confidence 4555554 4888 789999999999999999999999998774 333212234577899999999999999999999
Q ss_pred CCCEEEeccCcccc------------------CC-----CCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHH
Q 025278 84 VGDEVYGDINEKAL------------------DH-----PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140 (255)
Q Consensus 84 ~Gd~V~~~~~~~~~------------------~~-----~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~ 140 (255)
+||+|++.....+. .+ ....|+|++|++++.+.++++|++++.++++. ..+++++|
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~ 155 (339)
T cd08232 77 PGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVAL 155 (339)
T ss_pred CCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHH
Confidence 99999874221110 00 01368999999999999999999999988765 57778899
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCCcccccc---CCCcc
Q 025278 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---PEKFD 216 (255)
Q Consensus 141 ~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~d 216 (255)
+++......++++|+|.| +|++|++++|+|+.+ |. +++++++++++.++++++|+++++++.+.++... .+++|
T Consensus 156 ~~l~~~~~~~~~~VLI~g-~g~vG~~~~~lak~~-G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd 233 (339)
T cd08232 156 HAVNRAGDLAGKRVLVTG-AGPIGALVVAAARRA-GAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFD 233 (339)
T ss_pred HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCcc
Confidence 998654434899999987 799999999999996 87 7888888899989889999999998765443222 23699
Q ss_pred EEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 217 VVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 217 ~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
++||++|+........+.++ .+|+++.+|...
T Consensus 234 ~vld~~g~~~~~~~~~~~L~-~~G~~v~~g~~~ 265 (339)
T cd08232 234 VVFEASGAPAALASALRVVR-PGGTVVQVGMLG 265 (339)
T ss_pred EEEECCCCHHHHHHHHHHHh-cCCEEEEEecCC
Confidence 99999997555555667776 789999998654
No 98
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.98 E-value=8.1e-31 Score=226.28 Aligned_cols=241 Identities=29% Similarity=0.323 Sum_probs=191.4
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCC-CCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
||+++++.++.. +++. +.+.|+|.++|++||+.++++|+.|+..+.+.. .......|.++|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~---~~~~-~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v 76 (341)
T cd05281 1 MKAIVKTKAGPG---AELV-EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGV 76 (341)
T ss_pred CcceEEecCCCc---eEEE-eCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCC
Confidence 999999987753 6888 889999999999999999999999998765432 11223456789999999999999999
Q ss_pred CCCCCCCEEEeccCcccc------------------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHH
Q 025278 80 KKFKVGDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 141 (255)
+.+++||+|++.....+. .+....|+|++|++++.+.++++|++++.+. +.++.++.++++
T Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~~a~~ 155 (341)
T cd05281 77 TRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLGNAVH 155 (341)
T ss_pred CCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHHHHHH
Confidence 999999999885211000 0111358999999999999999999999854 456667778888
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCCccccc---c--CCCc
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED---L--PEKF 215 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~--~~~~ 215 (255)
++. ...++|++|+|.| +|++|++++++|+.+ |. ++++++++++|.+.++++|++++++++..++.. . .+++
T Consensus 156 ~~~-~~~~~g~~vlV~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v 232 (341)
T cd05281 156 TVL-AGDVSGKSVLITG-CGPIGLMAIAVAKAA-GASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGV 232 (341)
T ss_pred HHH-hcCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCC
Confidence 775 4557899999987 799999999999996 77 688888888999999999999988876544421 1 2479
Q ss_pred cEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 216 DVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 216 d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
|++|||+|+......+.+.++ .+|+++.+|....
T Consensus 233 d~vld~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 266 (341)
T cd05281 233 DVVLEMSGNPKAIEQGLKALT-PGGRVSILGLPPG 266 (341)
T ss_pred CEEEECCCCHHHHHHHHHHhc-cCCEEEEEccCCC
Confidence 999999997666666677776 7899999987543
No 99
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.98 E-value=7.8e-31 Score=224.22 Aligned_cols=231 Identities=29% Similarity=0.470 Sum_probs=194.9
Q ss_pred EEcccCCCcc--ceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCCC
Q 025278 5 VYKEYGNSQS--VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82 (255)
Q Consensus 5 v~~~~~~~~~--~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 82 (255)
+++.++.+ . .++++ +.+.|++.+++|+||+.++++|+.|+..+.+.++. ....|.++|||++|+|+++|++++.+
T Consensus 2 ~~~~~~~~-~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~ 78 (323)
T cd05282 2 VYTQFGEP-LPLVLELV-SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS-RPPLPAVPGNEGVGVVVEVGSGVSGL 78 (323)
T ss_pred eeCcCCCC-ccceEEeE-eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC-CCCCCCcCCcceEEEEEEeCCCCCCC
Confidence 34555554 3 67888 78889999999999999999999999998876542 23457899999999999999999999
Q ss_pred CCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcCCc
Q 025278 83 KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGAG 161 (255)
Q Consensus 83 ~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga~g 161 (255)
++||+|++... .|+|++|+.++...++++|+++++.+++.+++..+++|+++. ...+.+|++|+|+|++|
T Consensus 79 ~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~ 149 (323)
T cd05282 79 LVGQRVLPLGG---------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANS 149 (323)
T ss_pred CCCCEEEEeCC---------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEccccc
Confidence 99999999642 489999999999999999999999999988889999999984 56789999999999889
Q ss_pred hHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c--CCCccEEEECCCCccceeeeeecc
Q 025278 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGKMCISIVYQKCD 235 (255)
Q Consensus 162 ~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~--~~~~d~vid~~G~~~~~~~~~~~~ 235 (255)
++|++++++|+++ |++++++++++++.+.++++|++.++++.+.++.. . .+++|++|||+|+... ....+++
T Consensus 150 ~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~-~~~~~~l 227 (323)
T cd05282 150 AVGRMLIQLAKLL-GFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESA-TRLARSL 227 (323)
T ss_pred HHHHHHHHHHHHC-CCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHH-HHHHHhh
Confidence 9999999999996 99999999999999999999999999886543322 1 2479999999998654 3446667
Q ss_pred ccCCceEEEEeeccC
Q 025278 236 KFQEKSLINFGLFRQ 250 (255)
Q Consensus 236 ~~~~G~~v~~G~~~~ 250 (255)
+ .+|+++.+|....
T Consensus 228 ~-~~g~~v~~g~~~~ 241 (323)
T cd05282 228 R-PGGTLVNYGLLSG 241 (323)
T ss_pred C-CCCEEEEEccCCC
Confidence 6 6899999987654
No 100
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.98 E-value=1.5e-30 Score=226.59 Aligned_cols=240 Identities=25% Similarity=0.319 Sum_probs=185.3
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCC-CCCCCCcccccceEEEEEEeCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
+++++..++. ++++ +.+.|++.++||+||+.++++|++|++.+.+.... ....+|.++|||++|+|+++|++++
T Consensus 19 ~~~~~~~~~~----l~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (364)
T PLN02702 19 MAAWLVGVNT----LKIQ-PFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVK 93 (364)
T ss_pred ceEEEecCCc----eEEE-eccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCC
Confidence 4444554443 4787 78888899999999999999999999988763211 1123577899999999999999999
Q ss_pred CCCCCCEEEeccCccc-------------------cCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHH
Q 025278 81 KFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 141 (255)
++++||+|++.+...+ .......|+|++|+.++...++++|+++++++++.. .++.++|+
T Consensus 94 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~ 172 (364)
T PLN02702 94 HLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVH 172 (364)
T ss_pred CCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHH
Confidence 9999999987421100 000112689999999999999999999998887752 23334888
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCC--Cccccc--------
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYT--KENIED-------- 210 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~-------- 210 (255)
+++..++.++++|+|+| +|++|++++++|+.+ |++ +++++++++|.+.++++|++.++++. ..++.+
T Consensus 173 ~~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T PLN02702 173 ACRRANIGPETNVLVMG-AGPIGLVTMLAARAF-GAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKA 250 (364)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhh
Confidence 88778899999999997 799999999999996 776 56777888999999999999887653 222211
Q ss_pred cCCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 211 LPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 211 ~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
..+++|++||++|+......+.++++ .+|+++.+|...+
T Consensus 251 ~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~ 289 (364)
T PLN02702 251 MGGGIDVSFDCVGFNKTMSTALEATR-AGGKVCLVGMGHN 289 (364)
T ss_pred cCCCCCEEEECCCCHHHHHHHHHHHh-cCCEEEEEccCCC
Confidence 12479999999997666677788887 7899999997543
No 101
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=1.9e-30 Score=222.60 Aligned_cols=232 Identities=31% Similarity=0.465 Sum_probs=196.7
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
||+++...+.+ ..++++ +.+.|.|.++||+|++.++++|++|+..+.|.++.. ..+|.++|||++|+|+.+|+++..
T Consensus 2 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~vG~~v~~ 78 (331)
T cd08273 2 REVVVTRRGGP-EVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ-PPLPFTPGYDLVGRVDALGSGVTG 78 (331)
T ss_pred eeEEEccCCCc-ccEEEe-ccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC-CCCCcccccceEEEEEEeCCCCcc
Confidence 89999998877 678898 789999999999999999999999999988875422 246789999999999999999999
Q ss_pred CCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcCC
Q 025278 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGA 160 (255)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga~ 160 (255)
+++||+|.+... .|+|++|+.++.+.++++|++++.++++.+++++.++|+++. ...+.+|++|+|+|++
T Consensus 79 ~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~ 149 (331)
T cd08273 79 FEVGDRVAALTR---------VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGAS 149 (331)
T ss_pred CCCCCEEEEeCC---------CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCC
Confidence 999999999652 489999999999999999999999999999999999999985 4789999999999988
Q ss_pred chHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc---cCCCccEEEECCCCccceeeeeecccc
Q 025278 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFDVVFDAVGKMCISIVYQKCDKF 237 (255)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~~~~d~vid~~G~~~~~~~~~~~~~~ 237 (255)
|++|++++++|+.+ |++++.++. +++.+.++++|++. ++....++.. ..+++|+++|++|+.. ...+.++++
T Consensus 150 g~ig~~~~~~a~~~-g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~- 224 (331)
T cd08273 150 GGVGQALLELALLA-GAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGES-YEESYAALA- 224 (331)
T ss_pred cHHHHHHHHHHHHc-CCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcchhhhhccCCCceEEEECCchHH-HHHHHHHhc-
Confidence 99999999999995 899998887 88889999999754 4444332221 1247999999999876 445566666
Q ss_pred CCceEEEEeeccC
Q 025278 238 QEKSLINFGLFRQ 250 (255)
Q Consensus 238 ~~G~~v~~G~~~~ 250 (255)
.+|+++.+|....
T Consensus 225 ~~g~~v~~g~~~~ 237 (331)
T cd08273 225 PGGTLVCYGGNSS 237 (331)
T ss_pred CCCEEEEEccCCC
Confidence 6899999997643
No 102
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=1.4e-30 Score=222.29 Aligned_cols=236 Identities=45% Similarity=0.638 Sum_probs=198.5
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++..++.+ ..++++ +.+.|++.+++|+|++.++++|++|+....+.++ .....|.++|||++|+|+.+|+++.
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~v~~~G~~~~ 77 (326)
T cd08272 1 MKALVLESFGGP-EVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA-ARPPLPAILGCDVAGVVEAVGEGVT 77 (326)
T ss_pred CeEEEEccCCCc-hheEEe-ecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCCC
Confidence 999999998876 567888 7788889999999999999999999998877653 2234578899999999999999999
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga 159 (255)
.+++||+|++..... ....|+|++|+.++...++++|++++..+++.+++.+.+||+++ +..++++|++++|+|+
T Consensus 78 ~~~~Gd~V~~~~~~~----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~ 153 (326)
T cd08272 78 RFRVGDEVYGCAGGL----GGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGG 153 (326)
T ss_pred CCCCCCEEEEccCCc----CCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 999999999865211 01258899999999999999999999999998999999999997 6788999999999999
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc------CCCccEEEECCCCccceeeeee
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGKMCISIVYQK 233 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~~~~d~vid~~G~~~~~~~~~~ 233 (255)
+|++|++++++|+.+ |.+++.++++ ++.+.++++|++.+++.... +.+. .+++|+++|++|+.. ......
T Consensus 154 ~~~~g~~~~~~a~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~ 229 (326)
T cd08272 154 AGGVGHVAVQLAKAA-GARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFE 229 (326)
T ss_pred CCcHHHHHHHHHHHc-CCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHH
Confidence 999999999999995 9999999888 89999999999888876544 3221 247999999999754 444556
Q ss_pred ccccCCceEEEEeec
Q 025278 234 CDKFQEKSLINFGLF 248 (255)
Q Consensus 234 ~~~~~~G~~v~~G~~ 248 (255)
+++ .+|+++.+|..
T Consensus 230 ~l~-~~g~~v~~~~~ 243 (326)
T cd08272 230 AVA-LYGRVVSILGG 243 (326)
T ss_pred Hhc-cCCEEEEEecC
Confidence 666 78999998854
No 103
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.98 E-value=2.9e-30 Score=221.78 Aligned_cols=244 Identities=37% Similarity=0.473 Sum_probs=199.1
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++..++.. ..++++ +.+.|.+.+++|+||+.++++|.+|+..+.|..+. ...+|.++|||++|+|+.+|+++.
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~G~~~~ 77 (342)
T cd08266 1 MKAVVIRGHGGP-EVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI-KLPLPHILGSDGAGVVEAVGPGVT 77 (342)
T ss_pred CeEEEEecCCCc-cceeEe-ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC-CCCCCeecccceEEEEEEeCCCCC
Confidence 999999866655 557888 77888899999999999999999999998886531 235578899999999999999999
Q ss_pred CCCCCCEEEeccCccc------------------cCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHH
Q 025278 81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 142 (255)
.+++||+|++.....+ ..+....|+|++|+.++.+.++++|+++++++++.+++++.++|++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~ 157 (342)
T cd08266 78 NVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM 157 (342)
T ss_pred CCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence 9999999998632110 0112246889999999999999999999999999999999999999
Q ss_pred H-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc------CCCc
Q 025278 143 L-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKF 215 (255)
Q Consensus 143 l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~~~~ 215 (255)
+ +...+.++++++|+|+++++|++++++++.. |.+++.+++++++.+.++.++.+.+++..+.+..+. .+++
T Consensus 158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd08266 158 LVTRARLRPGETVLVHGAGSGVGSAAIQIAKLF-GATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGV 236 (342)
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCC
Confidence 7 5688899999999998889999999999995 999999999999999998888887777655332211 2479
Q ss_pred cEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 216 DVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 216 d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
|+++|++|... ......+++ ++|+++.+|....
T Consensus 237 d~~i~~~g~~~-~~~~~~~l~-~~G~~v~~~~~~~ 269 (342)
T cd08266 237 DVVVEHVGAAT-WEKSLKSLA-RGGRLVTCGATTG 269 (342)
T ss_pred cEEEECCcHHH-HHHHHHHhh-cCCEEEEEecCCC
Confidence 99999999753 344455666 6899999987654
No 104
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.98 E-value=2.2e-30 Score=220.67 Aligned_cols=239 Identities=34% Similarity=0.548 Sum_probs=201.1
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
||++++..++.+ ..++++ +.+.|++.+++|+|++.++++|++|+....|.++. ....|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~ 77 (325)
T cd08253 1 MRAIRYHEFGAP-DVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG-LPPLPYVPGSDGAGVVEAVGEGVD 77 (325)
T ss_pred CceEEEcccCCc-ccceee-ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC-CCCCCeecccceEEEEEeeCCCCC
Confidence 899999987765 557888 88999999999999999999999999988776542 245688999999999999999999
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga 159 (255)
++++||+|++..... ....|+|++|+.++.+.++++|++++.++++.++++..++|+++. ..++.+|++++|+|+
T Consensus 78 ~~~~Gd~v~~~~~~~----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~ 153 (325)
T cd08253 78 GLKVGDRVWLTNLGW----GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGG 153 (325)
T ss_pred CCCCCCEEEEecccc----CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcC
Confidence 999999999875321 113689999999999999999999999999999999999999985 488999999999999
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c--CCCccEEEECCCCccceeeeee
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGKMCISIVYQK 233 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~--~~~~d~vid~~G~~~~~~~~~~ 233 (255)
++++|++++++++.. |.+++++++++++.+.++++|++.+++....++.+ . .+++|+++|++|+... ....+
T Consensus 154 ~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~-~~~~~ 231 (325)
T cd08253 154 SGAVGHAAVQLARWA-GARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNL-AKDLD 231 (325)
T ss_pred CchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHH-HHHHH
Confidence 999999999999995 99999999999999999999999888876544321 1 2479999999997643 33455
Q ss_pred ccccCCceEEEEeecc
Q 025278 234 CDKFQEKSLINFGLFR 249 (255)
Q Consensus 234 ~~~~~~G~~v~~G~~~ 249 (255)
+++ .+|+++.+|...
T Consensus 232 ~l~-~~g~~v~~~~~~ 246 (325)
T cd08253 232 VLA-PGGRIVVYGSGG 246 (325)
T ss_pred hhC-CCCEEEEEeecC
Confidence 565 679999998743
No 105
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.98 E-value=2.8e-30 Score=218.71 Aligned_cols=238 Identities=45% Similarity=0.630 Sum_probs=197.5
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCC-CCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|||++++.++.. ..++++ +.+.|+++++||+||+.++++|++|+..+.|.+. ......|..+|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~ 78 (309)
T cd05289 1 MKAVRIHEYGGP-EVLELA-DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGV 78 (309)
T ss_pred CceEEEcccCCc-cceeec-ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCC
Confidence 899999988876 556777 6777889999999999999999999999887642 1123457889999999999999999
Q ss_pred CCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHh-cccCCCCEEEEEc
Q 025278 80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-SAFSAGKSILVLG 158 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlI~g 158 (255)
.++++||+|++.... ...|+|++|+.++...++++|+++++..++.+++...++|+++.. ..+.++++|+|+|
T Consensus 79 ~~~~~G~~V~~~~~~------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g 152 (309)
T cd05289 79 TGFKVGDEVFGMTPF------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHG 152 (309)
T ss_pred CCCCCCCEEEEccCC------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEec
Confidence 999999999986410 125899999999999999999999998888889999999999865 5589999999999
Q ss_pred CCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccc--ccCCCccEEEECCCCccceeeeeeccc
Q 025278 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE--DLPEKFDVVFDAVGKMCISIVYQKCDK 236 (255)
Q Consensus 159 a~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~--~~~~~~d~vid~~G~~~~~~~~~~~~~ 236 (255)
++|.+|++++++++.. |.++++++.++ +.+.++++|.+.+++....++. ...+++|++||++|+.. ...+..+++
T Consensus 153 ~~g~~g~~~~~~a~~~-g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~ 229 (309)
T cd05289 153 AAGGVGSFAVQLAKAR-GARVIATASAA-NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGET-LARSLALVK 229 (309)
T ss_pred CCchHHHHHHHHHHHc-CCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchHH-HHHHHHHHh
Confidence 8899999999999995 99999888877 8888899998888887654443 22347999999999873 344456666
Q ss_pred cCCceEEEEeeccC
Q 025278 237 FQEKSLINFGLFRQ 250 (255)
Q Consensus 237 ~~~G~~v~~G~~~~ 250 (255)
.+|+++.+|....
T Consensus 230 -~~g~~v~~g~~~~ 242 (309)
T cd05289 230 -PGGRLVSIAGPPP 242 (309)
T ss_pred -cCcEEEEEcCCCc
Confidence 6899999987543
No 106
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.98 E-value=3.3e-30 Score=225.90 Aligned_cols=230 Identities=29% Similarity=0.372 Sum_probs=181.3
Q ss_pred eEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCC-----CCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEe
Q 025278 16 LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-----ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG 90 (255)
Q Consensus 16 l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~-----~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~ 90 (255)
++++ +.+.|++.++||+||+.++++|++|++.+.+... .....+|.++|||++|+|+++|++++++++||+|++
T Consensus 39 ~~~~-~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 117 (384)
T cd08265 39 LRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA 117 (384)
T ss_pred EEEE-ECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence 6888 8999999999999999999999999998863211 012345789999999999999999999999999986
Q ss_pred ccCccc------------------cCCCCCCcceeeEEeeeCCceEeCCCC-------CCHHhhhccchhHHHHHHHH-H
Q 025278 91 DINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKN-------LSFVEAASLPLATETAYEGL-E 144 (255)
Q Consensus 91 ~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~lp~~-------~~~~~aa~l~~~~~ta~~~l-~ 144 (255)
.+...+ ..+....|+|++|+.++.+.++++|+. ++.+ ++.++.++++||+++ .
T Consensus 118 ~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~ 196 (384)
T cd08265 118 EEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFI 196 (384)
T ss_pred CCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHh
Confidence 322111 001223689999999999999999986 3444 556677888999998 3
Q ss_pred h-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCCc---cccc----c--CC
Q 025278 145 R-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKE---NIED----L--PE 213 (255)
Q Consensus 145 ~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~----~--~~ 213 (255)
. .++++|++|+|+| +|++|++++++|+.+ |+ ++++++++++|.+.++++|+++++++.+. ++.+ . .+
T Consensus 197 ~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~ 274 (384)
T cd08265 197 RGGGFRPGAYVVVYG-AGPIGLAAIALAKAA-GASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGW 274 (384)
T ss_pred hcCCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCC
Confidence 4 6899999999996 799999999999996 77 68888888899999999999999887643 2221 1 24
Q ss_pred CccEEEECCCCc-cceeeeeeccccCCceEEEEeeccC
Q 025278 214 KFDVVFDAVGKM-CISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 214 ~~d~vid~~G~~-~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
++|+|+|++|+. .....+.++++ .+|+++.+|....
T Consensus 275 gvDvvld~~g~~~~~~~~~~~~l~-~~G~~v~~g~~~~ 311 (384)
T cd08265 275 GADIQVEAAGAPPATIPQMEKSIA-INGKIVYIGRAAT 311 (384)
T ss_pred CCCEEEECCCCcHHHHHHHHHHHH-cCCEEEEECCCCC
Confidence 799999999964 23444566666 6899999997543
No 107
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.98 E-value=1.9e-30 Score=220.79 Aligned_cols=219 Identities=28% Similarity=0.336 Sum_probs=182.1
Q ss_pred ceEEeecccCCCCCCCeEEEEEeEeecChHhHHHH-cCCCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEeccC
Q 025278 15 VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN 93 (255)
Q Consensus 15 ~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~-~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~ 93 (255)
.++++ +++.|++.++||+||+.++++|++|+..+ .|..+......|.++|||++|+|+++|++++.+++||+|++..
T Consensus 6 ~~~~~-~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~- 83 (312)
T cd08269 6 RFEVE-EHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS- 83 (312)
T ss_pred eeEEE-ECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-
Confidence 36888 78999999999999999999999999987 7754322223478899999999999999999999999999864
Q ss_pred ccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHH
Q 025278 94 EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKH 173 (255)
Q Consensus 94 ~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~ 173 (255)
.|+|++|+.++.+.++++|+++ ..++....++.++|+++...+++++++|+|+| +|++|++++++|+.
T Consensus 84 ---------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~la~~ 151 (312)
T cd08269 84 ---------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRAGKTVAVIG-AGFIGLLFLQLAAA 151 (312)
T ss_pred ---------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHH
Confidence 5899999999999999999998 23332236777899998888899999999997 79999999999999
Q ss_pred hcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCccccc----c--CCCccEEEECCCCccceeeeeeccccCCceEEEEe
Q 025278 174 VFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFG 246 (255)
Q Consensus 174 ~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G 246 (255)
+ |++ ++++.+++++.++++++|+++++++...++.+ . .+++|++|||+|.......+.+.++ .+|+++.+|
T Consensus 152 ~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~-~~g~~~~~g 229 (312)
T cd08269 152 A-GARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVA-ERGRLVIFG 229 (312)
T ss_pred c-CCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhc-cCCEEEEEc
Confidence 6 888 88888899999999999999888865544322 1 2479999999987655566667776 789999998
Q ss_pred ecc
Q 025278 247 LFR 249 (255)
Q Consensus 247 ~~~ 249 (255)
...
T Consensus 230 ~~~ 232 (312)
T cd08269 230 YHQ 232 (312)
T ss_pred cCC
Confidence 754
No 108
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.97 E-value=8.3e-30 Score=216.56 Aligned_cols=232 Identities=36% Similarity=0.464 Sum_probs=196.8
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
||+.+..++.. ..+++. +.+.|.+.++||+||+.++++|++|+....+.++ ..+|.++|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~---~~~~~~~g~e~~G~v~~~g~~~~~ 75 (320)
T cd05286 1 KAVRIHKTGGP-EVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP---LPLPFVLGVEGAGVVEAVGPGVTG 75 (320)
T ss_pred CeEEEecCCCc-cceEEe-ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC---CCCCccCCcceeEEEEEECCCCCC
Confidence 67888877766 567777 6777788999999999999999999999887653 245778999999999999999999
Q ss_pred CCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCC
Q 025278 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (255)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~ 160 (255)
+++||+|++.. ..|+|++|+.++.+.++++|++++..+++.+++...++|+++ +..++.+|++|+|+|++
T Consensus 76 ~~~G~~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~ 146 (320)
T cd05286 76 FKVGDRVAYAG---------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAA 146 (320)
T ss_pred CCCCCEEEEec---------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 99999999863 158999999999999999999999999988888999999998 45789999999999999
Q ss_pred chHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c--CCCccEEEECCCCccceeeeeec
Q 025278 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGKMCISIVYQKC 234 (255)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~--~~~~d~vid~~G~~~~~~~~~~~ 234 (255)
|++|++++++++.+ |+++++++.++++.+.++++|++.+++.....+.+ . .+++|++|||+|+. ....+.++
T Consensus 147 g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~ 224 (320)
T cd05286 147 GGVGLLLTQWAKAL-GATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDS 224 (320)
T ss_pred chHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHh
Confidence 99999999999996 99999999999999999999999988776543322 1 24799999999974 44555666
Q ss_pred cccCCceEEEEeeccC
Q 025278 235 DKFQEKSLINFGLFRQ 250 (255)
Q Consensus 235 ~~~~~G~~v~~G~~~~ 250 (255)
++ .+|+++.+|....
T Consensus 225 l~-~~g~~v~~g~~~~ 239 (320)
T cd05286 225 LR-PRGTLVSFGNASG 239 (320)
T ss_pred hc-cCcEEEEEecCCC
Confidence 76 7899999987543
No 109
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=8.6e-30 Score=217.62 Aligned_cols=234 Identities=39% Similarity=0.574 Sum_probs=196.1
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++..|++. ..++++ +.+.|++.+++|+||+.++++|++|+....+.++ ...+|.++|||++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~~~ 76 (325)
T cd08271 1 MKAWVLPKPGAA-LQLTLE-EIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPP--AWSYPHVPGVDGAGVVVAVGAKVT 76 (325)
T ss_pred CeeEEEccCCCc-ceeEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCcccccceEEEEEEeCCCCC
Confidence 999999999952 457898 8999999999999999999999999998877643 123467899999999999999999
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga 159 (255)
.+++||+|++.... ...|+|++|+.++.+.++++|++++..+++.+++...++|+++. ...+++|++|+|+|+
T Consensus 77 ~~~~Gd~V~~~~~~------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~ 150 (325)
T cd08271 77 GWKVGDRVAYHASL------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGG 150 (325)
T ss_pred cCCCCCEEEeccCC------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 99999999986420 12589999999999999999999999999989999999999984 578899999999998
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc------cCCCccEEEECCCCccceeeeee
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGKMCISIVYQK 233 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~------~~~~~d~vid~~G~~~~~~~~~~ 233 (255)
++++|++++++++.. |.+++.+. ++++.+.++++|++.+++.....+.. ..+++|+++|++|+.... .+.+
T Consensus 151 ~~~ig~~~~~~a~~~-g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~-~~~~ 227 (325)
T cd08271 151 AGGVGSFAVQLAKRA-GLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAA-ALAP 227 (325)
T ss_pred ccHHHHHHHHHHHHc-CCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHH-HHHH
Confidence 899999999999995 99988776 67788888899999888876543322 124799999999976543 3566
Q ss_pred ccccCCceEEEEeec
Q 025278 234 CDKFQEKSLINFGLF 248 (255)
Q Consensus 234 ~~~~~~G~~v~~G~~ 248 (255)
+++ .+|+++.+|..
T Consensus 228 ~l~-~~G~~v~~~~~ 241 (325)
T cd08271 228 TLA-FNGHLVCIQGR 241 (325)
T ss_pred hhc-cCCEEEEEcCC
Confidence 676 68999988744
No 110
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.97 E-value=1.1e-29 Score=220.16 Aligned_cols=238 Identities=32% Similarity=0.470 Sum_probs=182.9
Q ss_pred CeEEEEcccCCCccceEEeecccCCC-CCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPS-LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~-~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
.|++++..++.+ ..++.. +.+.|+ +.++||+||+.++++|++|+..+.+... .....|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~vG~~v 77 (352)
T cd08247 1 YKALTFKNNTSP-LTITTI-KLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTF-HFKVKEKGLGRDYSGVIVKVGSNV 77 (352)
T ss_pred CceEEEecCCCc-ceeecc-CCCCCCCCCCCeEEEEEEEEecChHhHHHhccccc-ccccCCCccCceeEEEEEEeCccc
Confidence 489999999877 444433 344443 3999999999999999999988754321 112237789999999999999999
Q ss_pred C-CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCC----ceEeCCCCCCHHhhhccchhHHHHHHHHHh-c-ccCCCC
Q 025278 80 K-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN----LLALKPKNLSFVEAASLPLATETAYEGLER-S-AFSAGK 152 (255)
Q Consensus 80 ~-~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~-~-~~~~g~ 152 (255)
+ .+++||+|++...... ...|+|++|++++.. .++++|+++++++++.+++++.|||+++.. . ++++|+
T Consensus 78 ~~~~~~Gd~V~~~~~~~~----~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~ 153 (352)
T cd08247 78 ASEWKVGDEVCGIYPHPY----GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDS 153 (352)
T ss_pred ccCCCCCCEEEEeecCCC----CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCC
Confidence 8 8999999998653211 136899999999987 789999999999999999999999999865 4 699999
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCCEEEcCCCcc---c-cc----c--CCCccEEEEC
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKEN---I-ED----L--PEKFDVVFDA 221 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~---~-~~----~--~~~~d~vid~ 221 (255)
+|+|+|+++++|++++++|+++++. .++.+. ++++.+.++++|+++++++.+.+ + .+ . .+++|++|||
T Consensus 154 ~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~ 232 (352)
T cd08247 154 KVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDC 232 (352)
T ss_pred eEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEEC
Confidence 9999998899999999999985455 455554 55666678899999999876543 1 11 1 3589999999
Q ss_pred CCCccceeeeeeccc--cCCceEEEEe
Q 025278 222 VGKMCISIVYQKCDK--FQEKSLINFG 246 (255)
Q Consensus 222 ~G~~~~~~~~~~~~~--~~~G~~v~~G 246 (255)
+|+........++++ ..+|+++.++
T Consensus 233 ~g~~~~~~~~~~~l~~~~~~G~~v~~~ 259 (352)
T cd08247 233 VGGYDLFPHINSILKPKSKNGHYVTIV 259 (352)
T ss_pred CCCHHHHHHHHHHhCccCCCCEEEEEe
Confidence 998544444444442 0369999775
No 111
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.97 E-value=4.7e-30 Score=221.41 Aligned_cols=235 Identities=26% Similarity=0.293 Sum_probs=185.8
Q ss_pred EcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCC-CCCCCCCcccccceEEEEEEeCCCCCCCCC
Q 025278 6 YKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQVKKFKV 84 (255)
Q Consensus 6 ~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 84 (255)
-++|+.. ++++ +.|.|+|.++||+||+.++++|++|+..+.+... ....++|.++|||++|+|+++|++++++++
T Consensus 4 ~~~~~~~---~~l~-~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~ 79 (340)
T TIGR00692 4 KTKPGYG---AELT-EVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKV 79 (340)
T ss_pred cccCCCC---cEEE-ECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCC
Confidence 3556665 7888 7899999999999999999999999988765421 112345778999999999999999999999
Q ss_pred CCEEEeccCcccc------------------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHhc
Q 025278 85 GDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERS 146 (255)
Q Consensus 85 Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~ 146 (255)
||+|++..+..+. .+....|+|++|++++.+.++++|++++.+++ .++.++.++++++ ..
T Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~-~~ 157 (340)
T TIGR00692 80 GDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV-LA 157 (340)
T ss_pred CCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH-Hc
Confidence 9999884221000 01113689999999999999999999998554 5677778888886 34
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcCCCEEEcCCCccccc----c--CCCccEEE
Q 025278 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVF 219 (255)
Q Consensus 147 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~--~~~~d~vi 219 (255)
...+|++|+|.| +|++|.+++++|+.+ |.+ +++++++++|.+.++++|++.++++...++.+ . .+++|++|
T Consensus 158 ~~~~g~~vlI~~-~g~vg~~a~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vl 235 (340)
T TIGR00692 158 GPISGKSVLVTG-AGPIGLMAIAVAKAS-GAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFL 235 (340)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEE
Confidence 567899999987 799999999999996 887 77787888899999999998888876554322 1 24799999
Q ss_pred ECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 220 DAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 220 d~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
||+|+........++++ .+|+++.+|...
T Consensus 236 d~~g~~~~~~~~~~~l~-~~g~~v~~g~~~ 264 (340)
T TIGR00692 236 EMSGAPKALEQGLQAVT-PGGRVSLLGLPP 264 (340)
T ss_pred ECCCCHHHHHHHHHhhc-CCCEEEEEccCC
Confidence 99997665666677777 789999999764
No 112
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=2.6e-29 Score=214.23 Aligned_cols=234 Identities=35% Similarity=0.512 Sum_probs=196.8
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+.+..++.. ..++++ +.+.|.+.+++++||+.++++|+.|+....+.++.. ..+|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~vg~~~~ 77 (325)
T TIGR02824 1 MKAIEITEPGGP-EVLVLV-EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP-PGASDILGLEVAGEVVAVGEGVS 77 (325)
T ss_pred CceEEEccCCCc-ccceEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCCCCccceeEEEEEEeCCCCC
Confidence 899999887766 566777 667677899999999999999999999887765422 33478899999999999999999
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga 159 (255)
++++||+|++.. .+|+|++|+.++...++++|+++++.+++.++++..++|+++ +...+.++++|+|+|+
T Consensus 78 ~~~~Gd~V~~~~---------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~ 148 (325)
T TIGR02824 78 RWKVGDRVCALV---------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGG 148 (325)
T ss_pred CCCCCCEEEEcc---------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 999999999864 148999999999999999999999988888999999999987 5688999999999999
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c--CCCccEEEECCCCccceeeeee
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGKMCISIVYQK 233 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~--~~~~d~vid~~G~~~~~~~~~~ 233 (255)
+|++|++++++++.+ |++++++.+++++.+.++++|.+.+++....++.+ . .+++|+++|++|+.. ...+..
T Consensus 149 ~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~ 226 (325)
T TIGR02824 149 ASGIGTTAIQLAKAF-GARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIK 226 (325)
T ss_pred cchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHH
Confidence 999999999999995 99999999999999989999988887765433222 1 247999999999753 344455
Q ss_pred ccccCCceEEEEeecc
Q 025278 234 CDKFQEKSLINFGLFR 249 (255)
Q Consensus 234 ~~~~~~G~~v~~G~~~ 249 (255)
+++ .+|+++.+|...
T Consensus 227 ~l~-~~g~~v~~g~~~ 241 (325)
T TIGR02824 227 ALA-LDGRIVQIGFQG 241 (325)
T ss_pred hhc-cCcEEEEEecCC
Confidence 565 689999998754
No 113
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=2.7e-29 Score=214.44 Aligned_cols=239 Identities=35% Similarity=0.486 Sum_probs=199.3
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~ 80 (255)
|||+++...+.+ ..++++ +.+.|.+.+++++|++.++++|+.|+....+.++.. ..+|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~ 77 (328)
T cd08268 1 MRAVRFHQFGGP-EVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP-PPLPARLGYEAAGVVEAVGAGVT 77 (328)
T ss_pred CeEEEEeccCCc-ceeEEe-ecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC-CCCCCCCCcceEEEEEeeCCCCC
Confidence 899999987765 567887 777788999999999999999999998877765322 34578899999999999999999
Q ss_pred CCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEcC
Q 025278 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (255)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~ga 159 (255)
++++||+|.+.... .....|+|++|+.++.+.++++|++++.++++.++++..++|+++. ...+.++++++|+|+
T Consensus 78 ~~~~Gd~V~~~~~~----~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~ 153 (328)
T cd08268 78 GFAVGDRVSVIPAA----DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAA 153 (328)
T ss_pred cCCCCCEEEecccc----ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 99999999986421 1123589999999999999999999999999999999999999984 678889999999998
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccc----c--CCCccEEEECCCCccceeeeee
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGKMCISIVYQK 233 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~----~--~~~~d~vid~~G~~~~~~~~~~ 233 (255)
+|++|++++++++.. |++++.+++++++.+.++++|.+.+++....++.. . .+++|++||++|+.. ...+..
T Consensus 154 ~~~~g~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~ 231 (328)
T cd08268 154 SSSVGLAAIQIANAA-GATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLAD 231 (328)
T ss_pred ccHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHh-HHHHHH
Confidence 899999999999995 99999999999999999889988888776543322 1 237999999999844 444456
Q ss_pred ccccCCceEEEEeecc
Q 025278 234 CDKFQEKSLINFGLFR 249 (255)
Q Consensus 234 ~~~~~~G~~v~~G~~~ 249 (255)
+++ .+|+++.+|...
T Consensus 232 ~l~-~~g~~v~~g~~~ 246 (328)
T cd08268 232 ALA-PGGTLVVYGALS 246 (328)
T ss_pred hhc-cCCEEEEEEeCC
Confidence 666 789999998754
No 114
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.97 E-value=2.3e-29 Score=215.91 Aligned_cols=231 Identities=28% Similarity=0.321 Sum_probs=186.3
Q ss_pred eEEEEcccCC---CccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCC-CCCCCCcccccceEEEEEEeCC
Q 025278 2 KAWVYKEYGN---SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGS 77 (255)
Q Consensus 2 ka~v~~~~~~---~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~~G~ 77 (255)
|||+++...+ ....++++ +.+.|++.++||+||+.++++|+.|.....+.... .+...+.++|+|++|+|+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELV-EVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred cEEEEeccCCCCCCccceeEE-eccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 6888876652 23678998 88999999999999999999999887665543211 1112356789999999999996
Q ss_pred CCCCCCCCCEEEeccCccccCCCCCCcceeeEEeeeC-CceEeCCCCCC--HHhhhc-cchhHHHHHHHHH-hcccCCCC
Q 025278 78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEE-NLLALKPKNLS--FVEAAS-LPLATETAYEGLE-RSAFSAGK 152 (255)
Q Consensus 78 ~v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~lp~~~~--~~~aa~-l~~~~~ta~~~l~-~~~~~~g~ 152 (255)
+ ++++||||+.. ++|++|+.++. +.++++|++++ ..+++. ++++..|+|+++. ...+.+++
T Consensus 82 ~--~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~ 147 (329)
T cd05288 82 P--DFKVGDLVSGF------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGE 147 (329)
T ss_pred C--CCCCCCEEecc------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCC
Confidence 4 79999999973 58999999999 99999999985 444444 8889999999984 57789999
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH-cCCCEEEcCCCccccc----c-CCCccEEEECCCCcc
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED----L-PEKFDVVFDAVGKMC 226 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~----~-~~~~d~vid~~G~~~ 226 (255)
+|+|+|++|++|++++++|+.+ |++++++++++++.+.+++ +|++.++++.+.++.+ . .+++|++|||+|+.
T Consensus 148 ~vlI~g~~g~ig~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~- 225 (329)
T cd05288 148 TVVVSAAAGAVGSVVGQIAKLL-GARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGE- 225 (329)
T ss_pred EEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHH-
Confidence 9999999999999999999995 9999999999999999988 9999999887644322 1 25799999999974
Q ss_pred ceeeeeeccccCCceEEEEeeccC
Q 025278 227 ISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 227 ~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
....+.+.++ .+|+++.+|....
T Consensus 226 ~~~~~~~~l~-~~G~~v~~g~~~~ 248 (329)
T cd05288 226 ILDAALTLLN-KGGRIALCGAISQ 248 (329)
T ss_pred HHHHHHHhcC-CCceEEEEeeccC
Confidence 3445566666 7899999997653
No 115
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.97 E-value=4.6e-30 Score=208.09 Aligned_cols=217 Identities=29% Similarity=0.368 Sum_probs=176.6
Q ss_pred cceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCC-CCCCcccccceEEEEEEe--CCCCCCCCCCCEEEe
Q 025278 14 SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD-SPLPTIPGYDVAGVVEKV--GSQVKKFKVGDEVYG 90 (255)
Q Consensus 14 ~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~~--G~~v~~~~~Gd~V~~ 90 (255)
+.|+++ +.+.|+|++||||+|++|.++++. ++|.+...+ -..|.-+|-..+|.++.. -|+.+.|++||.|..
T Consensus 25 d~F~le-e~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~ 99 (340)
T COG2130 25 DDFRLE-EVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG 99 (340)
T ss_pred CCceeE-eccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe
Confidence 358999 899999999999999999999994 344433222 234566777665443332 267888999999998
Q ss_pred ccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCH--HhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHH
Q 025278 91 DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSF--VEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMV 167 (255)
Q Consensus 91 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~--~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a 167 (255)
. .+|++|.+++.+.+.++.+..-+ .....+.++..|||.+| +..+.++|++|+|.+|+|++|..+
T Consensus 100 ~------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvv 167 (340)
T COG2130 100 V------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVV 167 (340)
T ss_pred c------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHH
Confidence 4 58999999999999999754322 23455688999999999 578999999999999999999999
Q ss_pred HHHHHHhcCCcEEEEecChhhHHHHHH-cCCCEEEcCCCcccccc-----CCCccEEEECCCCccceeeeeeccccCCce
Q 025278 168 IQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIEDL-----PEKFDVVFDAVGKMCISIVYQKCDKFQEKS 241 (255)
Q Consensus 168 ~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~-----~~~~d~vid~~G~~~~~~~~~~~~~~~~G~ 241 (255)
.|+||. .|++|+.+..++||.+++++ +|.|.++||.++++.+. ++|+|+.||++|++..... +..+. ..+|
T Consensus 168 gQiAKl-kG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv-~~~ln-~~aR 244 (340)
T COG2130 168 GQIAKL-KGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAV-LPLLN-LFAR 244 (340)
T ss_pred HHHHHh-hCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHHH-HHhhc-cccc
Confidence 999998 59999999999999999986 99999999999887653 6799999999999875444 44454 6799
Q ss_pred EEEEeeccC
Q 025278 242 LINFGLFRQ 250 (255)
Q Consensus 242 ~v~~G~~~~ 250 (255)
+..+|.-++
T Consensus 245 i~~CG~IS~ 253 (340)
T COG2130 245 IPVCGAISQ 253 (340)
T ss_pred eeeeeehhh
Confidence 999998875
No 116
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=5.9e-29 Score=211.94 Aligned_cols=235 Identities=42% Similarity=0.624 Sum_probs=188.3
Q ss_pred EEcccCCCccce--EEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCC-CCCCCcccccceEEEEEEeCCCCCC
Q 025278 5 VYKEYGNSQSVL--KFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 5 v~~~~~~~~~~l--~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
+++..++. +++ +++ +.+.|++.++||+|+++++++|++|+..+.|.++.. ....|..+|||++|+|+++|+++.+
T Consensus 2 ~~~~~~~~-~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 79 (319)
T cd08267 2 VYTRYGSP-EVLLLLEV-EVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTR 79 (319)
T ss_pred eeCCCCCh-hhhhhccc-cCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCC
Confidence 45566665 343 777 788999999999999999999999999988765211 1234678999999999999999999
Q ss_pred CCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHh-cccCCCCEEEEEcCC
Q 025278 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-SAFSAGKSILVLGGA 160 (255)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlI~ga~ 160 (255)
+++||+|++.... ...|+|++|+.++.+.++++|++++.++++.+++++.+||+++.. ..+++|++|+|+|++
T Consensus 80 ~~~Gd~V~~~~~~------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~ 153 (319)
T cd08267 80 FKVGDEVFGRLPP------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGAS 153 (319)
T ss_pred CCCCCEEEEeccC------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 9999999986420 125899999999999999999999999999999999999999854 558999999999988
Q ss_pred chHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccc---ccCCCccEEEECCCCcc-ceeeeeeccc
Q 025278 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVVFDAVGKMC-ISIVYQKCDK 236 (255)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~~~~~~d~vid~~G~~~-~~~~~~~~~~ 236 (255)
|++|++++++|+.+ |++++.++.+ ++.+.++++|++++++....++. ...+++|+++||+|+.. ........++
T Consensus 154 g~~g~~~~~la~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~ 231 (319)
T cd08267 154 GGVGTFAVQIAKAL-GAHVTGVCST-RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALK 231 (319)
T ss_pred cHHHHHHHHHHHHc-CCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccC
Confidence 99999999999996 9999988865 88888899999888877654431 12347999999999532 1122222254
Q ss_pred cCCceEEEEeeccC
Q 025278 237 FQEKSLINFGLFRQ 250 (255)
Q Consensus 237 ~~~G~~v~~G~~~~ 250 (255)
++|+++.+|....
T Consensus 232 -~~g~~i~~g~~~~ 244 (319)
T cd08267 232 -PGGRYVSVGGGPS 244 (319)
T ss_pred -CCCEEEEeccccc
Confidence 6899999987643
No 117
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.97 E-value=1e-29 Score=213.75 Aligned_cols=184 Identities=22% Similarity=0.211 Sum_probs=152.8
Q ss_pred ccccceEEEEEEeCCCCC------CCCCCCEEEeccCccc------------------cCC-------CCCCcceeeEEe
Q 025278 63 IPGYDVAGVVEKVGSQVK------KFKVGDEVYGDINEKA------------------LDH-------PKRNGSLAEYTA 111 (255)
Q Consensus 63 ~~G~e~~G~V~~~G~~v~------~~~~Gd~V~~~~~~~~------------------~~~-------~~~~g~~~~~~~ 111 (255)
++|||++|+|+++|++++ ++++||||+..+...+ ..+ ...+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 589999999999999998 8999999976432110 001 113699999999
Q ss_pred eeCC-ceEeCCCCCCHHhhhccchhHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhH
Q 025278 112 VEEN-LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKL 189 (255)
Q Consensus 112 ~~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~ 189 (255)
+|.. .++++|+++++++++.++++..|+|+++++....+|++|+|+| +|++|++++|+|+++ |++ +++++++++|+
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-~G~vG~~~~~~ak~~-G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVG-AGMLGLTAAAAAAAA-GAARVVAADPSPDRR 158 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHH
Confidence 9997 7999999999999998888989999999877777999999998 699999999999996 876 88888899999
Q ss_pred HHHHHcCCCEEEcCCCcc--cccc--CCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 190 DLLRSLGADLAIDYTKEN--IEDL--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 190 ~~~~~~g~~~v~~~~~~~--~~~~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
++++++|++.++++.+.. ..+. ..++|++||++|.......+.++++ ++|+++.+|...
T Consensus 159 ~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~-~~G~iv~~G~~~ 221 (280)
T TIGR03366 159 ELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLD-VGGTAVLAGSVF 221 (280)
T ss_pred HHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhc-CCCEEEEeccCC
Confidence 999999999998865421 1111 2479999999998877777888888 899999999764
No 118
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.97 E-value=5e-29 Score=207.38 Aligned_cols=216 Identities=37% Similarity=0.473 Sum_probs=179.5
Q ss_pred eEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEeccCcc--------------c
Q 025278 31 QVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEK--------------A 96 (255)
Q Consensus 31 eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~--------------~ 96 (255)
||+||+.++++|+.|+..+.|..+ .....|.++|||++|+|+++|++++.+++||+|+...... .
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ 79 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP-PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGG 79 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC-cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCC
Confidence 689999999999999999988754 2345578899999999999999999999999999865321 1
Q ss_pred cCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhc
Q 025278 97 LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVF 175 (255)
Q Consensus 97 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~ 175 (255)
..+....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.. ..++++++|+|+|+.+ +|++++++++..
T Consensus 80 ~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~- 157 (271)
T cd05188 80 ILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAA- 157 (271)
T ss_pred EeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHc-
Confidence 1222346899999999999999999999999999999999999999965 4558999999999655 999999999995
Q ss_pred CCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc-----CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 176 GASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 176 g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-----~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
|.+++++++++++.+.++++|++.++++.+....+. .+++|++||++|+......+.+.++ ++|+++.+|....
T Consensus 158 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~ 236 (271)
T cd05188 158 GARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLR-PGGRIVVVGGTSG 236 (271)
T ss_pred CCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcc-cCCEEEEEccCCC
Confidence 899999999999999999999988888765544321 3579999999998444555566666 7899999997654
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.97 E-value=1.6e-28 Score=208.99 Aligned_cols=234 Identities=41% Similarity=0.575 Sum_probs=195.3
Q ss_pred CeEEEEcccCCCccceEEeecccCCCCC-CCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~~-~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v 79 (255)
|||+++..++.. ..+++. +.+ |.+. +++++||+.++++|++|+..+.|.+.. ....|.++|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~ 76 (323)
T cd08241 1 MKAVVCKELGGP-EDLVLE-EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV-KPPLPFVPGSEVAGVVEAVGEGV 76 (323)
T ss_pred CeEEEEecCCCc-ceeEEe-cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC-CCCCCCcccceeEEEEEEeCCCC
Confidence 899999877665 557787 677 7666 499999999999999999988876531 22346789999999999999999
Q ss_pred CCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH-hcccCCCCEEEEEc
Q 025278 80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLG 158 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlI~g 158 (255)
..+++||+|++.. ..|+|++|+.++.+.++++|++++..+++.+.++..+||+++. ...++++++|+|+|
T Consensus 77 ~~~~~G~~V~~~~---------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g 147 (323)
T cd08241 77 TGFKVGDRVVALT---------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLG 147 (323)
T ss_pred CCCCCCCEEEEec---------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence 9999999999864 1489999999999999999999998888888889999999985 67889999999999
Q ss_pred CCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc------CCCccEEEECCCCccceeeee
Q 025278 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGKMCISIVYQ 232 (255)
Q Consensus 159 a~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~------~~~~d~vid~~G~~~~~~~~~ 232 (255)
++|++|++++++|+.. |++++.+++++++.+.++++|++.+++....++.+. .+++|.++|++|+. ....+.
T Consensus 148 ~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~ 225 (323)
T cd08241 148 AAGGVGLAAVQLAKAL-GARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGD-VFEASL 225 (323)
T ss_pred CCchHHHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHH-HHHHHH
Confidence 8899999999999995 999999999999999999999888887765443221 24799999999973 344456
Q ss_pred eccccCCceEEEEeeccC
Q 025278 233 KCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 233 ~~~~~~~G~~v~~G~~~~ 250 (255)
.+++ .+|+++.+|....
T Consensus 226 ~~~~-~~g~~v~~~~~~~ 242 (323)
T cd08241 226 RSLA-WGGRLLVIGFASG 242 (323)
T ss_pred Hhhc-cCCEEEEEccCCC
Confidence 6666 6899999997554
No 120
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=1e-28 Score=208.75 Aligned_cols=215 Identities=32% Similarity=0.489 Sum_probs=184.5
Q ss_pred CCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEeccCccccCCCCCC
Q 025278 24 VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN 103 (255)
Q Consensus 24 ~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~ 103 (255)
.|++.+++++||+.++++|+.|+..+.+.++. ...+|.++|||++|+|+++|++++++++||+|++... ...
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-------~~~ 73 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT-MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG-------ESM 73 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC-CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-------CCC
Confidence 46789999999999999999999999887642 2356889999999999999999999999999998642 135
Q ss_pred cceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEe
Q 025278 104 GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183 (255)
Q Consensus 104 g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~ 183 (255)
|+|++|+.++.+.++++|++++.++++.++.++.++|++++...+++|++|+|+++++++|++++++++++ |+++++++
T Consensus 74 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~-g~~v~~~~ 152 (303)
T cd08251 74 GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLK-GAEIYATA 152 (303)
T ss_pred cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEc
Confidence 89999999999999999999999999999999999999998888999999999999999999999999996 99999999
Q ss_pred cChhhHHHHHHcCCCEEEcCCCccccc----c--CCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 184 SSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 184 ~~~~~~~~~~~~g~~~v~~~~~~~~~~----~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
+++++.+.++++|++.+++....++.+ . .+++|+++|++++.. .....++++ .+|+++.+|..+
T Consensus 153 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~-~~g~~v~~~~~~ 222 (303)
T cd08251 153 SSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEA-IQKGLNCLA-PGGRYVEIAMTA 222 (303)
T ss_pred CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHHhc-cCcEEEEEeccC
Confidence 999999999999999998876544322 1 247999999998643 344456666 689999998754
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=9.9e-28 Score=205.89 Aligned_cols=232 Identities=34% Similarity=0.479 Sum_probs=189.5
Q ss_pred eEEEEcccCCCccceEEeecccCCCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCC
Q 025278 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 2 ka~v~~~~~~~~~~l~~~~~~~~p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
||+++...+.. ..++++ +.+.|+|.++||+||+.++++|++|...+.|.++. ....|.++|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~~ 77 (337)
T cd08275 1 RAVVLTGFGGL-DKLKVE-KEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS-APKPPFVPGFECAGTVEAVGEGVKD 77 (337)
T ss_pred CeEEEcCCCCc-cceEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCcceeEEEEEEECCCCcC
Confidence 67888777765 567887 67778899999999999999999999988876532 2345778999999999999999999
Q ss_pred CCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCC
Q 025278 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (255)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~ 160 (255)
+++||+|++... .|+|++|+.++.+.++++|+++++.+++.++++..++|+++ +...+++|++|+|+|++
T Consensus 78 ~~~G~~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~ 148 (337)
T cd08275 78 FKVGDRVMGLTR---------FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAA 148 (337)
T ss_pred CCCCCEEEEecC---------CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCc
Confidence 999999998642 48999999999999999999999999888899999999998 46789999999999988
Q ss_pred chHHHHHHHHHHHhcCCcEEEE-ecChhhHHHHHHcCCCEEEcCCCccccc-----cCCCccEEEECCCCccceeeeeec
Q 025278 161 GGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGKMCISIVYQKC 234 (255)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~-----~~~~~d~vid~~G~~~~~~~~~~~ 234 (255)
|++|++++++|+.+ .. +.++ ..++++.++++++|++.+++....++.+ ..+++|+++|++|+.. ...+.++
T Consensus 149 g~~g~~~~~~a~~~-~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~ 225 (337)
T cd08275 149 GGVGLAAGQLCKTV-PN-VTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGED-TRKSYDL 225 (337)
T ss_pred chHHHHHHHHHHHc-cC-cEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHh
Confidence 99999999999985 22 2333 2345688888889998888876544322 1357999999999764 4455666
Q ss_pred cccCCceEEEEeecc
Q 025278 235 DKFQEKSLINFGLFR 249 (255)
Q Consensus 235 ~~~~~G~~v~~G~~~ 249 (255)
++ .+|+++.+|...
T Consensus 226 l~-~~g~~v~~g~~~ 239 (337)
T cd08275 226 LK-PMGRLVVYGAAN 239 (337)
T ss_pred hc-cCcEEEEEeecC
Confidence 76 689999999764
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.96 E-value=4e-27 Score=197.29 Aligned_cols=203 Identities=35% Similarity=0.482 Sum_probs=175.6
Q ss_pred CeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEeccCccccCCCCCCcceeeE
Q 025278 30 DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY 109 (255)
Q Consensus 30 ~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~ 109 (255)
+||+||+.++++|++|++...|.+ ..+|.++|||++|+|+++|++++.+++||+|++.. .|+|++|
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~----------~g~~~~~ 66 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA----------PGAFATH 66 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe----------cCcccce
Confidence 579999999999999999988764 24578999999999999999999999999999864 4899999
Q ss_pred EeeeCCceEeCCCCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhh
Q 025278 110 TAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (255)
Q Consensus 110 ~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (255)
+.++.+.++++|+++++.+++.++++..++|+++ +...+++|++|+|+|++|++|++++++|+.+ |++++.++.++++
T Consensus 67 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~-g~~v~~~~~~~~~ 145 (293)
T cd05195 67 VRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATVGSEEK 145 (293)
T ss_pred EEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHc-CCEEEEEeCCHHH
Confidence 9999999999999999999999999999999998 4578999999999998999999999999995 9999999999999
Q ss_pred HHHHHHcC--CCEEEcCCCccccc----c--CCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 189 LDLLRSLG--ADLAIDYTKENIED----L--PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 189 ~~~~~~~g--~~~v~~~~~~~~~~----~--~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
.+.++++| ++.++++...++.+ . .+++|++||++|+. ....+.++++ .+|+++.+|...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~-~~g~~v~~g~~~ 212 (293)
T cd05195 146 REFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLA-PFGRFVEIGKRD 212 (293)
T ss_pred HHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcc-cCceEEEeeccc
Confidence 99998888 77888765543322 1 34799999999987 4556677776 689999998765
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.95 E-value=2.9e-26 Score=191.94 Aligned_cols=198 Identities=34% Similarity=0.483 Sum_probs=170.7
Q ss_pred EEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEeccCccccCCCCCCcceeeEEeee
Q 025278 34 IKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVE 113 (255)
Q Consensus 34 V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~ 113 (255)
||+.++++|++|++...|.++ .|.++|||++|+|+++|++++.+++||+|++.. .|+|++|+.++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~-----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------~g~~~~~~~~~ 66 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP-----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------PGSFATYVRTD 66 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC-----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc----------CCceeeEEEcc
Confidence 789999999999999887643 367899999999999999999999999999864 48999999999
Q ss_pred CCceEeCCCCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH
Q 025278 114 ENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (255)
Q Consensus 114 ~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (255)
.+.++++|+++++.+++.++++..++|+++ +...+++|++|+|+|++|++|++++++++.+ |++++.+++++++.+.+
T Consensus 67 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~ 145 (288)
T smart00829 67 ARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATAGSPEKRDFL 145 (288)
T ss_pred HHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 999999999999999999999999999998 6688999999999999999999999999995 99999999999999999
Q ss_pred HHcCC--CEEEcCCCcccccc------CCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 193 RSLGA--DLAIDYTKENIEDL------PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 193 ~~~g~--~~v~~~~~~~~~~~------~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
+++|+ +.++++.+.++.+. .+++|++||++|+. ....+..+++ .+|+++.+|...
T Consensus 146 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~-~~g~~v~~g~~~ 208 (288)
T smart00829 146 RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLA-PGGRFVEIGKRD 208 (288)
T ss_pred HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhcc-CCcEEEEEcCcC
Confidence 99998 77887765443221 24799999999964 3445566666 689999998653
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.93 E-value=5.6e-24 Score=172.28 Aligned_cols=208 Identities=27% Similarity=0.380 Sum_probs=164.8
Q ss_pred CCCCCCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCccccc----ceEEEEEEeCCCCCCCCCCCEEEeccCccccCCC
Q 025278 25 PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGY----DVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHP 100 (255)
Q Consensus 25 p~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~----e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~ 100 (255)
.++++++|+||.+|.+.++.....++...+. .--.|+.+|. .++|+|++ ++.+++++||.|.+..
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~-~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~-------- 101 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPS-DYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV-------- 101 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcc-cccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec--------
Confidence 4579999999999999999866555433221 1222344443 67899998 5778899999999964
Q ss_pred CCCcceeeEEeeeCC--ceEeCC--CCCCHHhh-hccchhHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHh
Q 025278 101 KRNGSLAEYTAVEEN--LLALKP--KNLSFVEA-ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHV 174 (255)
Q Consensus 101 ~~~g~~~~~~~~~~~--~~~~lp--~~~~~~~a-a~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~ 174 (255)
+|.||.+++.. ..++++ .+.++... .++.++.+|||-++ +...++.|++|+|.||+|++|+++.|+|+.+
T Consensus 102 ----gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~ 177 (343)
T KOG1196|consen 102 ----GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLM 177 (343)
T ss_pred ----cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhc
Confidence 79999999765 334444 34554443 45688999999998 6788999999999999999999999999997
Q ss_pred cCCcEEEEecChhhHHHHH-HcCCCEEEcCCCc-ccccc-----CCCccEEEECCCCccceeeeeeccccCCceEEEEee
Q 025278 175 FGASKVAATSSTAKLDLLR-SLGADLAIDYTKE-NIEDL-----PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGL 247 (255)
Q Consensus 175 ~g~~vi~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~-----~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~ 247 (255)
|++|+.+..++||..+++ ++|.|.++||.++ +..+. .+|+|+.||.+|+.-.....+.|. .+||++.+|.
T Consensus 178 -Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~--~~gri~~CG~ 254 (343)
T KOG1196|consen 178 -GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMN--LHGRIAVCGM 254 (343)
T ss_pred -CCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhh--hccceEeeee
Confidence 999999999999999986 6899999999887 44332 579999999999987665555555 6799999999
Q ss_pred ccC
Q 025278 248 FRQ 250 (255)
Q Consensus 248 ~~~ 250 (255)
-++
T Consensus 255 ISq 257 (343)
T KOG1196|consen 255 ISQ 257 (343)
T ss_pred ehh
Confidence 885
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.92 E-value=4e-24 Score=179.24 Aligned_cols=176 Identities=33% Similarity=0.412 Sum_probs=149.9
Q ss_pred CCCCCcccccceEEEEEEeCCCCCCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhH
Q 025278 57 DSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT 136 (255)
Q Consensus 57 ~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~ 136 (255)
+.++|.++|||++|+|+++|++++++++||+|++. +.|++|+.++.+.++++|++++.++++.+ .++
T Consensus 17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~ 83 (277)
T cd08255 17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF------------GPHAERVVVPANLLVPLPDGLPPERAALT-ALA 83 (277)
T ss_pred cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec------------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHH
Confidence 35678999999999999999999999999999985 35999999999999999999999888887 788
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHHHHcC-CCEEEcCCCccccccCCC
Q 025278 137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLG-ADLAIDYTKENIEDLPEK 214 (255)
Q Consensus 137 ~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~ 214 (255)
.+||+++...++++|++++|+| +|++|++++++|+.+ |.+ +++++++++++++++++| ++.+++...... ..++
T Consensus 84 ~ta~~~~~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~-g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~ 159 (277)
T cd08255 84 ATALNGVRDAEPRLGERVAVVG-LGLVGLLAAQLAKAA-GAREVVGVDPDAARRELAEALGPADPVAADTADEI--GGRG 159 (277)
T ss_pred HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEECCCHHHHHHHHHcCCCccccccchhhh--cCCC
Confidence 9999999888899999999997 799999999999996 888 999999999999999999 666665432111 2347
Q ss_pred ccEEEECCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 215 FDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 215 ~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+|++||++|...........++ .+|+++.+|....
T Consensus 160 ~d~vl~~~~~~~~~~~~~~~l~-~~g~~~~~g~~~~ 194 (277)
T cd08255 160 ADVVIEASGSPSALETALRLLR-DRGRVVLVGWYGL 194 (277)
T ss_pred CCEEEEccCChHHHHHHHHHhc-CCcEEEEEeccCC
Confidence 9999999997665566677776 7899999997654
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.83 E-value=6.8e-21 Score=176.02 Aligned_cols=216 Identities=23% Similarity=0.309 Sum_probs=181.1
Q ss_pred CCCccceEEeecccCC---CCCCCeEEEEEeEeecChHhHHHHcCCCCC-----CCCCCCcccccceEEEEEEeCCCCCC
Q 025278 10 GNSQSVLKFETNVEVP---SLREDQVLIKVVAAALNPIDFKRMLGAFSA-----TDSPLPTIPGYDVAGVVEKVGSQVKK 81 (255)
Q Consensus 10 ~~~~~~l~~~~~~~~p---~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~-----~~~~~p~~~G~e~~G~V~~~G~~v~~ 81 (255)
|+. +.++|. +.+.. +..++.=+..|.|+.||..|+....|+++. .......++|.|++|+
T Consensus 1424 GDl-sSlrWi-es~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR---------- 1491 (2376)
T KOG1202|consen 1424 GDL-SSLRWI-ESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR---------- 1491 (2376)
T ss_pred ccc-cceeee-ecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------
Confidence 555 678888 66654 457777789999999999999999998642 2234458899999998
Q ss_pred CCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHH-HhcccCCCCEEEEEcCC
Q 025278 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (255)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlI~ga~ 160 (255)
.+-|.||+++.+ .-++++.+.++.+.++.+|++..+++|+..|+-+.|+||++ .+...++|+++|||+++
T Consensus 1492 d~~GrRvM~mvp---------AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGs 1562 (2376)
T KOG1202|consen 1492 DASGRRVMGMVP---------AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGS 1562 (2376)
T ss_pred cCCCcEEEEeee---------hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCC
Confidence 567999999864 56889999999999999999999999999999999999998 68899999999999999
Q ss_pred chHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCCCEEEcCCCcccccc------CCCccEEEECCCCccceee
Q 025278 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIEDL------PEKFDVVFDAVGKMCISIV 230 (255)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~------~~~~d~vid~~G~~~~~~~ 230 (255)
|++|++|+.+|.+. |++|+.++.+.||++++.+ +...++-|+++.+|+.. .+|+|+|+|+...+. ...
T Consensus 1563 GGVGQAAIaiALa~-G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEk-LQA 1640 (2376)
T KOG1202|consen 1563 GGVGQAAIAIALAH-GCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEK-LQA 1640 (2376)
T ss_pred CchhHHHHHHHHHc-CCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHH-HHH
Confidence 99999999999995 9999999999999999853 44667778888877653 468999999877554 344
Q ss_pred eeeccccCCceEEEEeecc
Q 025278 231 YQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 231 ~~~~~~~~~G~~v~~G~~~ 249 (255)
+++++. .+||+..+|-+.
T Consensus 1641 SiRCLa-~~GRFLEIGKfD 1658 (2376)
T KOG1202|consen 1641 SIRCLA-LHGRFLEIGKFD 1658 (2376)
T ss_pred HHHHHH-hcCeeeeeccee
Confidence 577776 689999999875
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.81 E-value=2e-19 Score=129.94 Aligned_cols=91 Identities=33% Similarity=0.367 Sum_probs=74.2
Q ss_pred CCeEEEEEeEeecChHhHHHHcCCCCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEeccCc--------------
Q 025278 29 EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE-------------- 94 (255)
Q Consensus 29 ~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~-------------- 94 (255)
|+||+||++++|||++|+++++|.. ......|.++|||++|+|+++|+++++|++||||+..+..
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~-~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~ 79 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGP-PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPN 79 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSS-SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhcc-ccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccc
Confidence 6899999999999999999999852 2456889999999999999999999999999999875431
Q ss_pred ----cccCCCCCCcceeeEEeeeCCceEeC
Q 025278 95 ----KALDHPKRNGSLAEYTAVEENLLALK 120 (255)
Q Consensus 95 ----~~~~~~~~~g~~~~~~~~~~~~~~~l 120 (255)
....+...+|+|+||+++|.+.++++
T Consensus 80 ~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 80 LCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred cCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 11244457899999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.43 E-value=2.1e-13 Score=101.34 Aligned_cols=86 Identities=36% Similarity=0.511 Sum_probs=77.0
Q ss_pred hHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccccc----C--CCccEEEECCCCccceeeeeecc
Q 025278 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----P--EKFDVVFDAVGKMCISIVYQKCD 235 (255)
Q Consensus 162 ~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~----~--~~~d~vid~~G~~~~~~~~~~~~ 235 (255)
++|++++|+|+.+ |++|++++++++|++.++++|+++++++++.++.+. . +++|+||||+|.......+..++
T Consensus 1 ~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAM-GAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHT-TSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHc-CCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 5899999999996 799999999999999999999999999988765432 2 37999999999888888889999
Q ss_pred ccCCceEEEEeecc
Q 025278 236 KFQEKSLINFGLFR 249 (255)
Q Consensus 236 ~~~~G~~v~~G~~~ 249 (255)
+ ++|+++.+|..+
T Consensus 80 ~-~~G~~v~vg~~~ 92 (130)
T PF00107_consen 80 R-PGGRIVVVGVYG 92 (130)
T ss_dssp E-EEEEEEEESSTS
T ss_pred c-cCCEEEEEEccC
Confidence 8 899999999987
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.10 E-value=5.9e-10 Score=99.91 Aligned_cols=98 Identities=18% Similarity=0.273 Sum_probs=78.6
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEE-EcCCCcc-------------c-----
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKEN-------------I----- 208 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~-------------~----- 208 (255)
..++++|+|+| +|.+|+++++.|+.+ |++|+++|.+++|++.++++|++.+ +|..+++ +
T Consensus 162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~l-GA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIG-AGVAGLAAIGAAGSL-GAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 45799999999 999999999999996 8899999999999999999999854 6653321 0
Q ss_pred ---cccCCCccEEEECCCCcc-----c-eeeeeeccccCCceEEEEeec
Q 025278 209 ---EDLPEKFDVVFDAVGKMC-----I-SIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 209 ---~~~~~~~d~vid~~G~~~-----~-~~~~~~~~~~~~G~~v~~G~~ 248 (255)
.+..+++|+||+|+|.+. . ...+.+.++ ++|+++.+|..
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mk-pGgvIVdvg~~ 287 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMK-PGSVIVDLAAE 287 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcC-CCCEEEEEccC
Confidence 111257999999999643 3 255677777 89999999985
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.94 E-value=4e-09 Score=92.36 Aligned_cols=103 Identities=20% Similarity=0.200 Sum_probs=81.1
Q ss_pred HHHHH-Hhc-ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCcc
Q 025278 139 AYEGL-ERS-AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD 216 (255)
Q Consensus 139 a~~~l-~~~-~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d 216 (255)
.|.++ +.. ...+|++|+|.| .|.+|+.+++.++.+ |++|++++.++.|++.++++|++.+ +. .+..+++|
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~~-Ga~ViV~d~d~~R~~~A~~~G~~~~-~~-----~e~v~~aD 259 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRGQ-GARVIVTEVDPICALQAAMEGYEVM-TM-----EEAVKEGD 259 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEECChhhHHHHHhcCCEEc-cH-----HHHHcCCC
Confidence 44555 322 346899999999 999999999999996 8899999999999999999998543 21 22335789
Q ss_pred EEEECCCCccceeee-eeccccCCceEEEEeeccC
Q 025278 217 VVFDAVGKMCISIVY-QKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 217 ~vid~~G~~~~~~~~-~~~~~~~~G~~v~~G~~~~ 250 (255)
+||+|+|........ ...++ ++|+++++|.+..
T Consensus 260 VVI~atG~~~~i~~~~l~~mk-~GgilvnvG~~~~ 293 (413)
T cd00401 260 IFVTTTGNKDIITGEHFEQMK-DGAIVCNIGHFDV 293 (413)
T ss_pred EEEECCCCHHHHHHHHHhcCC-CCcEEEEeCCCCC
Confidence 999999987766554 67777 7899999997643
No 131
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.60 E-value=2e-07 Score=82.05 Aligned_cols=105 Identities=24% Similarity=0.289 Sum_probs=79.1
Q ss_pred HHHHHHHhc-ccC-CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCc
Q 025278 138 TAYEGLERS-AFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF 215 (255)
Q Consensus 138 ta~~~l~~~-~~~-~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 215 (255)
..|.++.+. ++. .|++|+|.| .|.+|..+++.++.+ |++|+++++++.|...+...|++ +.+ ..+..+++
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~-Ga~ViV~d~dp~ra~~A~~~G~~-v~~-----l~eal~~a 268 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGL-GARVIVTEVDPICALQAAMDGFR-VMT-----MEEAAELG 268 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCCchhhHHHHhcCCE-ecC-----HHHHHhCC
Confidence 356666544 444 899999999 899999999999996 99999999999887777777765 222 23334589
Q ss_pred cEEEECCCCcccee-eeeeccccCCceEEEEeeccCC
Q 025278 216 DVVFDAVGKMCISI-VYQKCDKFQEKSLINFGLFRQE 251 (255)
Q Consensus 216 d~vid~~G~~~~~~-~~~~~~~~~~G~~v~~G~~~~~ 251 (255)
|+||+++|...... .....++ +++.++++|.+..+
T Consensus 269 DVVI~aTG~~~vI~~~~~~~mK-~GailiNvG~~d~E 304 (425)
T PRK05476 269 DIFVTATGNKDVITAEHMEAMK-DGAILANIGHFDNE 304 (425)
T ss_pred CEEEECCCCHHHHHHHHHhcCC-CCCEEEEcCCCCCc
Confidence 99999999766443 3455565 67889999987754
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.48 E-value=8e-07 Score=79.79 Aligned_cols=98 Identities=21% Similarity=0.353 Sum_probs=73.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEE-EcCCCc-------------c-------
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-------------N------- 207 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v-~~~~~~-------------~------- 207 (255)
.++++|+|+| +|.+|+++++.++.+ |++|+++++++++++.++++|++.+ ++..+. +
T Consensus 162 vp~akVlViG-aG~iGl~Aa~~ak~l-GA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIG-AGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 3578999999 899999999999996 8999999999999999999998763 332110 0
Q ss_pred -ccccCCCccEEEECC---CCcc---ceeeeeeccccCCceEEEEeecc
Q 025278 208 -IEDLPEKFDVVFDAV---GKMC---ISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 208 -~~~~~~~~d~vid~~---G~~~---~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
+.+..+++|++|+|+ |.+. ......+.++ +++.++.++.-.
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MK-pGsvIVDlA~d~ 287 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMK-AGSVIVDLAAEQ 287 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCC-CCCEEEEeeeCC
Confidence 112235799999999 6433 3344466666 788888887644
No 133
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.38 E-value=1.7e-06 Score=75.87 Aligned_cols=103 Identities=20% Similarity=0.232 Sum_probs=77.1
Q ss_pred HHHHHHhc-c-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCcc
Q 025278 139 AYEGLERS-A-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD 216 (255)
Q Consensus 139 a~~~l~~~-~-~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d 216 (255)
.|.++.+. + ...|++|+|.| .|.+|+.+++.++.+ |++|++++.++.|...++..|+. +.+. .+..++.|
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~ak~~-Ga~ViV~d~dp~r~~~A~~~G~~-v~~l-----eeal~~aD 252 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAG-YGWCGKGIAMRARGM-GARVIVTEVDPIRALEAAMDGFR-VMTM-----EEAAKIGD 252 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEEC-CCHHHHHHHHHHhhC-cCEEEEEeCChhhHHHHHhcCCE-eCCH-----HHHHhcCC
Confidence 44555332 3 46899999999 999999999999985 99999999998887777777863 3221 22345789
Q ss_pred EEEECCCCccceee-eeeccccCCceEEEEeeccC
Q 025278 217 VVFDAVGKMCISIV-YQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 217 ~vid~~G~~~~~~~-~~~~~~~~~G~~v~~G~~~~ 250 (255)
++|+++|....... ....++ +++.++++|.+..
T Consensus 253 VVItaTG~~~vI~~~~~~~mK-~GailiN~G~~~~ 286 (406)
T TIGR00936 253 IFITATGNKDVIRGEHFENMK-DGAIVANIGHFDV 286 (406)
T ss_pred EEEECCCCHHHHHHHHHhcCC-CCcEEEEECCCCc
Confidence 99999997765443 455565 6789999988754
No 134
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.35 E-value=5.5e-06 Score=70.15 Aligned_cols=96 Identities=19% Similarity=0.311 Sum_probs=71.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCcccee
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMCISI 229 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~~~ 229 (255)
.+++|+|+| .|.+|+.+++.++.+ |++|++.++++++++.++++|++.+ .. .+..+...++|+||+|++......
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~-Ga~V~v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~l~~aDiVI~t~p~~~i~~ 225 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKAL-GANVTVGARKSAHLARITEMGLSPF-HL--SELAEEVGKIDIIFNTIPALVLTK 225 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCeee-cH--HHHHHHhCCCCEEEECCChhhhhH
Confidence 589999999 899999999999996 8999999999998888888987643 21 223344568999999987543333
Q ss_pred eeeeccccCCceEEEEeeccCC
Q 025278 230 VYQKCDKFQEKSLINFGLFRQE 251 (255)
Q Consensus 230 ~~~~~~~~~~G~~v~~G~~~~~ 251 (255)
...+.++ +++.++.++...+.
T Consensus 226 ~~l~~~~-~g~vIIDla~~pgg 246 (296)
T PRK08306 226 EVLSKMP-PEALIIDLASKPGG 246 (296)
T ss_pred HHHHcCC-CCcEEEEEccCCCC
Confidence 3334454 56777777765543
No 135
>PLN02494 adenosylhomocysteinase
Probab=98.32 E-value=1.8e-06 Score=76.49 Aligned_cols=94 Identities=22% Similarity=0.245 Sum_probs=74.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCccc-
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMCI- 227 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~- 227 (255)
-.|++|+|.| .|.+|..+++.++.+ |++|+++++++.+...+...|+..+ + ..+..+..|++|+++|....
T Consensus 252 LaGKtVvViG-yG~IGr~vA~~aka~-Ga~VIV~e~dp~r~~eA~~~G~~vv-~-----leEal~~ADVVI~tTGt~~vI 323 (477)
T PLN02494 252 IAGKVAVICG-YGDVGKGCAAAMKAA-GARVIVTEIDPICALQALMEGYQVL-T-----LEDVVSEADIFVTTTGNKDII 323 (477)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhHHHHhcCCeec-c-----HHHHHhhCCEEEECCCCccch
Confidence 6799999999 999999999999985 9999999999888777777777532 1 22334578999999997764
Q ss_pred eeeeeeccccCCceEEEEeeccCC
Q 025278 228 SIVYQKCDKFQEKSLINFGLFRQE 251 (255)
Q Consensus 228 ~~~~~~~~~~~~G~~v~~G~~~~~ 251 (255)
....+..++ +++.++++|.++.+
T Consensus 324 ~~e~L~~MK-~GAiLiNvGr~~~e 346 (477)
T PLN02494 324 MVDHMRKMK-NNAIVCNIGHFDNE 346 (477)
T ss_pred HHHHHhcCC-CCCEEEEcCCCCCc
Confidence 345566776 78999999987644
No 136
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.25 E-value=1.8e-06 Score=79.68 Aligned_cols=80 Identities=25% Similarity=0.410 Sum_probs=61.3
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecC---------------------hhhHHHHHHcCCCEEEcCCC
Q 025278 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS---------------------TAKLDLLRSLGADLAIDYTK 205 (255)
Q Consensus 147 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~---------------------~~~~~~~~~~g~~~v~~~~~ 205 (255)
..++|++|+|+| +|++|+++++.++.. |.+|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIG-aGpaGL~aA~~l~~~-G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIG-GGPAGLSAAYHLRRM-GHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 367899999999 899999999999985 8999998842 35667788999987777533
Q ss_pred -cc--ccccCCCccEEEECCCCccce
Q 025278 206 -EN--IEDLPEKFDVVFDAVGKMCIS 228 (255)
Q Consensus 206 -~~--~~~~~~~~d~vid~~G~~~~~ 228 (255)
.+ ......++|+||+++|.....
T Consensus 211 ~~~~~~~~~~~~~D~Vi~AtG~~~~~ 236 (564)
T PRK12771 211 GEDITLEQLEGEFDAVFVAIGAQLGK 236 (564)
T ss_pred CCcCCHHHHHhhCCEEEEeeCCCCCC
Confidence 22 222234799999999976543
No 137
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.17 E-value=3e-06 Score=72.35 Aligned_cols=107 Identities=22% Similarity=0.234 Sum_probs=75.0
Q ss_pred ceEeCCCCCCHHhhhccchhHHHHHHHHHhccc----CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhH-H
Q 025278 116 LLALKPKNLSFVEAASLPLATETAYEGLERSAF----SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-D 190 (255)
Q Consensus 116 ~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~----~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~-~ 190 (255)
..+++|+.+..+.+... .+...++.+++.+.. .++++|+|+| +|.+|.++++.++..++.++++++++++|. +
T Consensus 140 ~a~~~~k~vr~et~i~~-~~~sv~~~Av~~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 140 KAIKVGKRVRTETGISR-GAVSISSAAVELAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHhhhcCCCC-CCcCHHHHHHHHHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 44667788777665544 233347777754432 4789999999 799999999999875346777889988875 5
Q ss_pred HHHHcCCCEEEcCCCccccccCCCccEEEECCCCccc
Q 025278 191 LLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMCI 227 (255)
Q Consensus 191 ~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~ 227 (255)
+++++|.. +++.. +..+.....|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~~--~~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPLD--ELLELLNEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeHH--HHHHHHhcCCEEEECCCCCch
Confidence 67788874 33321 233334578999999998765
No 138
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.06 E-value=2.8e-05 Score=64.35 Aligned_cols=146 Identities=19% Similarity=0.241 Sum_probs=90.1
Q ss_pred CCCCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHhcccCCCCEEEEEcC
Q 025278 80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159 (255)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ga 159 (255)
..+++||+++..+ +|.+|.. +...++.+++++++..+. .+.+. ..+..+. ....++++|+-.|
T Consensus 65 ~p~~~g~~~~i~p------------~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~-~~l~~l~-~~~~~~~~VLDiG- 127 (250)
T PRK00517 65 HPIRIGDRLWIVP------------SWEDPPD-PDEINIELDPGMAFGTGT-HPTTR-LCLEALE-KLVLPGKTVLDVG- 127 (250)
T ss_pred CCEEEcCCEEEEC------------CCcCCCC-CCeEEEEECCCCccCCCC-CHHHH-HHHHHHH-hhcCCCCEEEEeC-
Confidence 4477899888755 4666644 667888999988765433 22221 1222232 2256889999999
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHc----CCCEEEcCCCccccccCCCccEEEECCCCccc---eeeee
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GADLAIDYTKENIEDLPEKFDVVFDAVGKMCI---SIVYQ 232 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~---~~~~~ 232 (255)
+|. |.+++.+++. +..+++++|.++...+.+++. +....+. +......+|+|+-+...... ...+.
T Consensus 128 cGs-G~l~i~~~~~-g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~-----~~~~~~~fD~Vvani~~~~~~~l~~~~~ 200 (250)
T PRK00517 128 CGS-GILAIAAAKL-GAKKVLAVDIDPQAVEAARENAELNGVELNVY-----LPQGDLKADVIVANILANPLLELAPDLA 200 (250)
T ss_pred CcH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEE-----EccCCCCcCEEEEcCcHHHHHHHHHHHH
Confidence 776 8888876664 344599999999988877542 2211111 00001158999976553322 22345
Q ss_pred eccccCCceEEEEeeccC
Q 025278 233 KCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 233 ~~~~~~~G~~v~~G~~~~ 250 (255)
+.++ ++|++++.|....
T Consensus 201 ~~Lk-pgG~lilsgi~~~ 217 (250)
T PRK00517 201 RLLK-PGGRLILSGILEE 217 (250)
T ss_pred HhcC-CCcEEEEEECcHh
Confidence 5566 7999999886543
No 139
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.05 E-value=2.9e-05 Score=64.13 Aligned_cols=105 Identities=21% Similarity=0.319 Sum_probs=69.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcC----CC-EEE--cCCCcc-cccc-------C
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG----AD-LAI--DYTKEN-IEDL-------P 212 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g----~~-~v~--~~~~~~-~~~~-------~ 212 (255)
..+++++|+||++++|...+..+.. +|.+++.+.|+++|++.+. ++. .. .++ |..+.+ .... .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~-~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLAR-RGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 5678999999999999987777666 5999999999999998763 333 11 233 322221 1111 1
Q ss_pred CCccEEEECCC-Cccceee-------------------------eeeccccCCceEEEEeeccCCCCC
Q 025278 213 EKFDVVFDAVG-KMCISIV-------------------------YQKCDKFQEKSLINFGLFRQEVPK 254 (255)
Q Consensus 213 ~~~d~vid~~G-~~~~~~~-------------------------~~~~~~~~~G~~v~~G~~~~~~~~ 254 (255)
..+|+.+|++| +...... ...|.+...|.++.+|...+..|+
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~ 150 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT 150 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC
Confidence 36999999999 2211110 122333246999999998876653
No 140
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.05 E-value=3e-05 Score=62.59 Aligned_cols=101 Identities=23% Similarity=0.347 Sum_probs=70.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCC----CEEEcCCCccc--------cccCCCcc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA----DLAIDYTKENI--------EDLPEKFD 216 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~----~~v~~~~~~~~--------~~~~~~~d 216 (255)
.++.++|+||++++|.+.++..... |++|+.+.|..+|++.+ .+++. ...+|-.+..- .+.-+.+|
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~-G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEA-GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 4588999999999999999999885 99999999999999877 47772 22344443321 11234799
Q ss_pred EEEECCCCccceee--------------------------eeeccccCCceEEEEeeccCC
Q 025278 217 VVFDAVGKMCISIV--------------------------YQKCDKFQEKSLINFGLFRQE 251 (255)
Q Consensus 217 ~vid~~G~~~~~~~--------------------------~~~~~~~~~G~~v~~G~~~~~ 251 (255)
++++..|....... .-.|.....|.++.+|...+.
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~ 144 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR 144 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc
Confidence 99999994433211 122333346899998887653
No 141
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.00 E-value=5.8e-05 Score=67.18 Aligned_cols=93 Identities=26% Similarity=0.274 Sum_probs=71.8
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCccc
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMCI 227 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~ 227 (255)
.-.|++|+|.| .|.+|..+++.++.+ |++|+++++++.+...+...|+..+ ++.+..+..|+|+.++|....
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~-Ga~ViV~e~dp~~a~~A~~~G~~~~------~leell~~ADIVI~atGt~~i 322 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALRGF-GARVVVTEIDPICALQAAMEGYQVV------TLEDVVETADIFVTATGNKDI 322 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHhcCceec------cHHHHHhcCCEEEECCCcccc
Confidence 45799999999 999999999999985 9999999888777655655676432 233445689999999997664
Q ss_pred ee-eeeeccccCCceEEEEeecc
Q 025278 228 SI-VYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 228 ~~-~~~~~~~~~~G~~v~~G~~~ 249 (255)
.. ..+..++ +++.++.+|.+.
T Consensus 323 I~~e~~~~MK-pGAiLINvGr~d 344 (476)
T PTZ00075 323 ITLEHMRRMK-NNAIVGNIGHFD 344 (476)
T ss_pred cCHHHHhccC-CCcEEEEcCCCc
Confidence 43 4466666 788999999875
No 142
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.88 E-value=4.5e-05 Score=67.95 Aligned_cols=153 Identities=20% Similarity=0.230 Sum_probs=94.9
Q ss_pred ccccceEEEEEEeCCCCCCCCCCCEEEec--------cCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccch
Q 025278 63 IPGYDVAGVVEKVGSQVKKFKVGDEVYGD--------INEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL 134 (255)
Q Consensus 63 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~ 134 (255)
.-|||+++.+.+++++.++.-+|..-+.- +......+....+.|++.+.++ +.+..+.. ....
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~~--------k~v~~~t~-i~~~ 161 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAFSVA--------KRVRTETG-IGAG 161 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH--------hhHhhhcC-CCCC
Confidence 46999999999999988775555553210 0011111222234454443333 33322211 1122
Q ss_pred hHHHHHHHHHhcc----cCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHH-HHHHcCCCEEEcCCCccc
Q 025278 135 ATETAYEGLERSA----FSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLD-LLRSLGADLAIDYTKENI 208 (255)
Q Consensus 135 ~~~ta~~~l~~~~----~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~-~~~~~g~~~v~~~~~~~~ 208 (255)
+...++.+++... ..++++|+|+| +|.+|.++++.++.. |. +++++.++.++.+ +++++|.+ +++. .+.
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~-G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~~ 236 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEK-GVRKITVANRTLERAEELAEEFGGE-AIPL--DEL 236 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--HHH
Confidence 3334677775432 25789999999 899999999999885 75 7888899988865 66778864 3332 222
Q ss_pred cccCCCccEEEECCCCcccee
Q 025278 209 EDLPEKFDVVFDAVGKMCISI 229 (255)
Q Consensus 209 ~~~~~~~d~vid~~G~~~~~~ 229 (255)
.+...++|+||+|+|++....
T Consensus 237 ~~~l~~aDvVI~aT~s~~~~i 257 (423)
T PRK00045 237 PEALAEADIVISSTGAPHPII 257 (423)
T ss_pred HHHhccCCEEEECCCCCCcEE
Confidence 333458999999999776554
No 143
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.85 E-value=9.7e-05 Score=64.58 Aligned_cols=97 Identities=21% Similarity=0.285 Sum_probs=65.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCCCEEEcCCC-ccccccCCCccEEEECCC---Cc
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTK-ENIEDLPEKFDVVFDAVG---KM 225 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~v~~~~~-~~~~~~~~~~d~vid~~G---~~ 225 (255)
+.+|+|+| +|.+|+.+++.++.+ |++|+++++++++++.+. .++........+ .++.+..+.+|++|+|++ ..
T Consensus 167 ~~~VlViG-aG~vG~~aa~~a~~l-Ga~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~ 244 (370)
T TIGR00518 167 PGDVTIIG-GGVVGTNAAKMANGL-GATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAK 244 (370)
T ss_pred CceEEEEc-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCC
Confidence 45699999 799999999999996 889999999998887765 556533222221 233344568999999984 21
Q ss_pred cc---eeeeeeccccCCceEEEEeeccC
Q 025278 226 CI---SIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 226 ~~---~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
.- .....+.++ +++.++.++...+
T Consensus 245 ~p~lit~~~l~~mk-~g~vIvDva~d~G 271 (370)
T TIGR00518 245 APKLVSNSLVAQMK-PGAVIVDVAIDQG 271 (370)
T ss_pred CCcCcCHHHHhcCC-CCCEEEEEecCCC
Confidence 11 122344455 6788888886543
No 144
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.83 E-value=4.5e-05 Score=56.94 Aligned_cols=97 Identities=24% Similarity=0.336 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHHH-HHcCCC--EEEcCCCccccccCCCccEEEECCCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLL-RSLGAD--LAIDYTKENIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~~~~~~d~vid~~G~ 224 (255)
-.+++++|+| +|++|.+++..+... |++ ++++.|+.+|.+.+ ++++.. .+++..+ ..+....+|+||+|++.
T Consensus 10 l~~~~vlviG-aGg~ar~v~~~L~~~-g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~--~~~~~~~~DivI~aT~~ 85 (135)
T PF01488_consen 10 LKGKRVLVIG-AGGAARAVAAALAAL-GAKEITIVNRTPERAEALAEEFGGVNIEAIPLED--LEEALQEADIVINATPS 85 (135)
T ss_dssp GTTSEEEEES-SSHHHHHHHHHHHHT-TSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG--HCHHHHTESEEEE-SST
T ss_pred cCCCEEEEEC-CHHHHHHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHcCccccceeeHHH--HHHHHhhCCeEEEecCC
Confidence 3688999999 899999999999886 766 88889999887765 456322 2333322 22223579999999996
Q ss_pred ccceeeeeeccccCC---ceEEEEeeccC
Q 025278 225 MCISIVYQKCDKFQE---KSLINFGLFRQ 250 (255)
Q Consensus 225 ~~~~~~~~~~~~~~~---G~~v~~G~~~~ 250 (255)
...... ...+.... +.++-++.+..
T Consensus 86 ~~~~i~-~~~~~~~~~~~~~v~Dla~Pr~ 113 (135)
T PF01488_consen 86 GMPIIT-EEMLKKASKKLRLVIDLAVPRD 113 (135)
T ss_dssp TSTSST-HHHHTTTCHHCSEEEES-SS-S
T ss_pred CCcccC-HHHHHHHHhhhhceeccccCCC
Confidence 543222 11221011 46777776654
No 145
>PRK08324 short chain dehydrogenase; Validated
Probab=97.81 E-value=4.4e-05 Score=72.14 Aligned_cols=110 Identities=25% Similarity=0.284 Sum_probs=70.3
Q ss_pred cceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEe
Q 025278 104 GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183 (255)
Q Consensus 104 g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~ 183 (255)
-++++|..++...++.+ +.++.+++..... ......+|++++|+||+|++|...++.+... |.+|++++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~---------~~~~~l~gk~vLVTGasggIG~~la~~L~~~-Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM---------PKPKPLAGKVALVTGAAGGIGKATAKRLAAE-GACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC---------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEe
Confidence 35667777776666665 5555555431100 0122346899999999999999999988884 89999999
Q ss_pred cChhhHHHHH-HcCC--C---EEEcCCCcc-ccc-------cCCCccEEEECCCC
Q 025278 184 SSTAKLDLLR-SLGA--D---LAIDYTKEN-IED-------LPEKFDVVFDAVGK 224 (255)
Q Consensus 184 ~~~~~~~~~~-~~g~--~---~v~~~~~~~-~~~-------~~~~~d~vid~~G~ 224 (255)
++.++.+.+. +++. . ...|..+.. ... ..+++|++|+++|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~ 508 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGI 508 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 9988776553 4443 1 122333221 111 12479999999993
No 146
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.79 E-value=6.4e-05 Score=59.06 Aligned_cols=73 Identities=18% Similarity=0.374 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcC---CCEEEcCCCcc----cccc----CCCccEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG---ADLAIDYTKEN----IEDL----PEKFDVV 218 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g---~~~v~~~~~~~----~~~~----~~~~d~v 218 (255)
.|.+|||+||++++|+..++-...+ |-+||+..|++++++.++... ...+.|..+.+ +.++ -...|++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~el-gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLEL-GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHh-CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 4789999999999999988888886 999999999999999997654 23344544433 1111 1257999
Q ss_pred EECCC
Q 025278 219 FDAVG 223 (255)
Q Consensus 219 id~~G 223 (255)
+++.|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 99988
No 147
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.74 E-value=0.00013 Score=61.54 Aligned_cols=95 Identities=17% Similarity=0.276 Sum_probs=65.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCcccee
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMCISI 229 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~~~ 229 (255)
.|++++|+| .|.+|.+++..++.+ |++|++.++++++.+.+.+.|...+ .. .+..+..++.|+||+++.......
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~~-G~~V~v~~R~~~~~~~~~~~g~~~~-~~--~~l~~~l~~aDiVint~P~~ii~~ 224 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSAL-GARVFVGARSSADLARITEMGLIPF-PL--NKLEEKVAEIDIVINTIPALVLTA 224 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCeee-cH--HHHHHHhccCCEEEECCChHHhCH
Confidence 578999999 899999999999985 8999999999888877777775432 21 223334468899999987442222
Q ss_pred eeeeccccCCceEEEEeeccC
Q 025278 230 VYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 230 ~~~~~~~~~~G~~v~~G~~~~ 250 (255)
..+..++ ++..++.++...+
T Consensus 225 ~~l~~~k-~~aliIDlas~Pg 244 (287)
T TIGR02853 225 DVLSKLP-KHAVIIDLASKPG 244 (287)
T ss_pred HHHhcCC-CCeEEEEeCcCCC
Confidence 2233344 4556666666443
No 148
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.69 E-value=0.00023 Score=59.56 Aligned_cols=101 Identities=19% Similarity=0.199 Sum_probs=67.1
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHHHHc----CCCEEEcCCCcccccc---CCCcc
Q 025278 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSL----GADLAIDYTKENIEDL---PEKFD 216 (255)
Q Consensus 145 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~---~~~~d 216 (255)
...+++|++||.+| +|. |..+.++++..+. .++++++.+++.++.+++. +.+.+ +....++.+. .+.+|
T Consensus 72 ~~~~~~g~~VLDiG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~d~~~l~~~~~~fD 148 (272)
T PRK11873 72 LAELKPGETVLDLG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLGEIEALPVADNSVD 148 (272)
T ss_pred hccCCCCCEEEEeC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEcchhhCCCCCCcee
Confidence 45688999999999 777 8888888877522 4699999999999888653 33221 1111111111 24799
Q ss_pred EEEECCC------CccceeeeeeccccCCceEEEEeecc
Q 025278 217 VVFDAVG------KMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 217 ~vid~~G------~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
+|+...- .......+.+.++ ++|++++.+...
T Consensus 149 ~Vi~~~v~~~~~d~~~~l~~~~r~Lk-pGG~l~i~~~~~ 186 (272)
T PRK11873 149 VIISNCVINLSPDKERVFKEAFRVLK-PGGRFAISDVVL 186 (272)
T ss_pred EEEEcCcccCCCCHHHHHHHHHHHcC-CCcEEEEEEeec
Confidence 9985432 2234455677788 899999987654
No 149
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.58 E-value=0.0013 Score=55.52 Aligned_cols=173 Identities=14% Similarity=0.065 Sum_probs=101.6
Q ss_pred EEEEEEeCCCCCCCCCCCEEEeccCcccc------------------CCCCCCcceeeEEeeeCCceEeCCCCCCHHhh-
Q 025278 69 AGVVEKVGSQVKKFKVGDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEA- 129 (255)
Q Consensus 69 ~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a- 129 (255)
-++|++ |+++++.+|.|++++.+.... ......-.|.+|..+..+..+.- +.++.
T Consensus 38 fA~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~----~~e~~~ 111 (314)
T PF11017_consen 38 FATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDP----EREDWQ 111 (314)
T ss_pred EEEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCc----chhHHH
Confidence 366676 899999999999987642111 00112234555555554433311 12222
Q ss_pred hccchhHHHHHHHHH---hcccCCCCEEEEEcCCchHHHHHHHHHH-HhcCCcEEEEecChhhHHHHHHcC-CCEEEcCC
Q 025278 130 ASLPLATETAYEGLE---RSAFSAGKSILVLGGAGGVGTMVIQLAK-HVFGASKVAATSSTAKLDLLRSLG-ADLAIDYT 204 (255)
Q Consensus 130 a~l~~~~~ta~~~l~---~~~~~~g~~VlI~ga~g~~G~~a~~~a~-~~~g~~vi~~~~~~~~~~~~~~~g-~~~v~~~~ 204 (255)
+++---+.|.|..-+ ....-..+.|+|..|++..++..+..++ ..++.++|.+++. .+..+.+.+| .|.++.|+
T Consensus 112 ~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~-~N~~Fve~lg~Yd~V~~Yd 190 (314)
T PF11017_consen 112 MLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSA-RNVAFVESLGCYDEVLTYD 190 (314)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecC-cchhhhhccCCceEEeehh
Confidence 222223446664432 2234455789999999999999999888 3345667766654 4455889999 78888886
Q ss_pred CccccccCCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 205 KENIEDLPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 205 ~~~~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
+-+..+ ...--+++|+.|.........+-+.-.--..+.+|...
T Consensus 191 ~i~~l~-~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 191 DIDSLD-APQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred hhhhcc-CCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 543221 23557888999977655544332221113456666544
No 150
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.53 E-value=0.00062 Score=51.95 Aligned_cols=96 Identities=22% Similarity=0.257 Sum_probs=61.2
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCcc
Q 025278 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 147 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~ 226 (255)
..-.|++++|.| -|.+|.-.++.++.+ |++|++++.++-+.-.+..-|.+.. ...+..+..|++|.++|...
T Consensus 19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~-Ga~V~V~e~DPi~alqA~~dGf~v~------~~~~a~~~adi~vtaTG~~~ 90 (162)
T PF00670_consen 19 LMLAGKRVVVIG-YGKVGKGIARALRGL-GARVTVTEIDPIRALQAAMDGFEVM------TLEEALRDADIFVTATGNKD 90 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHT-T-EEEEE-SSHHHHHHHHHTT-EEE-------HHHHTTT-SEEEE-SSSSS
T ss_pred eeeCCCEEEEeC-CCcccHHHHHHHhhC-CCEEEEEECChHHHHHhhhcCcEec------CHHHHHhhCCEEEECCCCcc
Confidence 456899999999 999999999999996 9999999999988777777776432 23344567899999999766
Q ss_pred cee-eeeeccccCCceEEEEeeccCC
Q 025278 227 ISI-VYQKCDKFQEKSLINFGLFRQE 251 (255)
Q Consensus 227 ~~~-~~~~~~~~~~G~~v~~G~~~~~ 251 (255)
... .-++.++ .+-.+..+|.+..+
T Consensus 91 vi~~e~~~~mk-dgail~n~Gh~d~E 115 (162)
T PF00670_consen 91 VITGEHFRQMK-DGAILANAGHFDVE 115 (162)
T ss_dssp SB-HHHHHHS--TTEEEEESSSSTTS
T ss_pred ccCHHHHHHhc-CCeEEeccCcCcee
Confidence 422 2244443 33445555655443
No 151
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.50 E-value=0.00042 Score=63.32 Aligned_cols=81 Identities=20% Similarity=0.209 Sum_probs=56.8
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH-c--------CC-----CEE--EcCCCc-
Q 025278 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L--------GA-----DLA--IDYTKE- 206 (255)
Q Consensus 144 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~--------g~-----~~v--~~~~~~- 206 (255)
...+.+.|++++|+||+|.+|..+++.+.. .|.+|++++++.++.+.+.+ + |. ..+ .|..+.
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk-~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e 151 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD 151 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHH
Confidence 356678899999999999999999888877 49999999999888754421 1 21 112 232221
Q ss_pred cccccCCCccEEEECCCCc
Q 025278 207 NIEDLPEKFDVVFDAVGKM 225 (255)
Q Consensus 207 ~~~~~~~~~d~vid~~G~~ 225 (255)
.+.+..+++|+||.+.|..
T Consensus 152 sI~~aLggiDiVVn~AG~~ 170 (576)
T PLN03209 152 QIGPALGNASVVICCIGAS 170 (576)
T ss_pred HHHHHhcCCCEEEEccccc
Confidence 2223346899999999854
No 152
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=97.47 E-value=6.8e-05 Score=55.04 Aligned_cols=50 Identities=32% Similarity=0.413 Sum_probs=35.3
Q ss_pred cCCCEEEcCCCccccccCCCccEEEECCC--CccceeeeeeccccCCceEEEEee
Q 025278 195 LGADLAIDYTKENIEDLPEKFDVVFDAVG--KMCISIVYQKCDKFQEKSLINFGL 247 (255)
Q Consensus 195 ~g~~~v~~~~~~~~~~~~~~~d~vid~~G--~~~~~~~~~~~~~~~~G~~v~~G~ 247 (255)
|||++++||++.++ ...+++|+|||++| .......+.+++ ++|+++.+|.
T Consensus 1 LGAd~vidy~~~~~-~~~~~~D~ViD~~g~~~~~~~~~~~~~l--~~G~~v~i~~ 52 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-AGPGGVDVVIDTVGQTGESLLDASRKLL--PGGRVVSIGG 52 (127)
T ss_dssp CT-SEEEETTCSHH-HTTS-EEEEEESS-CCHHHCGGGCCCTE--EEEEEEEE-S
T ss_pred CCcCEEecCCCccc-cCCCCceEEEECCCCccHHHHHHHHHHC--CCCEEEEECC
Confidence 69999999997777 43579999999999 555445555666 6799999873
No 153
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.47 E-value=0.00065 Score=60.41 Aligned_cols=153 Identities=19% Similarity=0.244 Sum_probs=98.0
Q ss_pred ccccceEEEEEEeCCCCCCCCCCCEEEec--------cCccccCCCCCCcceeeEEeeeCCceEe---C-CCCCCHHhhh
Q 025278 63 IPGYDVAGVVEKVGSQVKKFKVGDEVYGD--------INEKALDHPKRNGSLAEYTAVEENLLAL---K-PKNLSFVEAA 130 (255)
Q Consensus 63 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~---l-p~~~~~~~aa 130 (255)
.-|.|+++.+.+++++.++.-+|+.-++- +......+...++.|++++.++. .+.. | +..++...+|
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A 167 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA 167 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH
Confidence 46889999999999988775555554310 11222234445678999888776 3332 3 2223321111
Q ss_pred ccchhHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHH-HHHHcCCCEEEcCCCccc
Q 025278 131 SLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLD-LLRSLGADLAIDYTKENI 208 (255)
Q Consensus 131 ~l~~~~~ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~-~~~~~g~~~v~~~~~~~~ 208 (255)
.-.+.+.....++++|+|+| +|.+|.++++.++.. | .+++++.++.++.+ +++++|.. .++. .+.
T Consensus 168 --------v~la~~~~~~l~~~~VlViG-aG~iG~~~a~~L~~~-G~~~V~v~~rs~~ra~~la~~~g~~-~i~~--~~l 234 (417)
T TIGR01035 168 --------VELAERIFGSLKGKKALLIG-AGEMGELVAKHLLRK-GVGKILIANRTYERAEDLAKELGGE-AVKF--EDL 234 (417)
T ss_pred --------HHHHHHHhCCccCCEEEEEC-ChHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCe-EeeH--HHH
Confidence 11122333446789999999 799999999999885 6 77888899988755 66778764 3322 133
Q ss_pred cccCCCccEEEECCCCcccee
Q 025278 209 EDLPEKFDVVFDAVGKMCISI 229 (255)
Q Consensus 209 ~~~~~~~d~vid~~G~~~~~~ 229 (255)
.+...++|+||+|+|.+....
T Consensus 235 ~~~l~~aDvVi~aT~s~~~ii 255 (417)
T TIGR01035 235 EEYLAEADIVISSTGAPHPIV 255 (417)
T ss_pred HHHHhhCCEEEECCCCCCceE
Confidence 334468999999999776543
No 154
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.44 E-value=0.0011 Score=53.99 Aligned_cols=74 Identities=22% Similarity=0.315 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHc---CCCEEEcC--CCcc-ccc-------cCCCc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSL---GADLAIDY--TKEN-IED-------LPEKF 215 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~---g~~~v~~~--~~~~-~~~-------~~~~~ 215 (255)
.+++|+|+|++|++|..+++.+... |.+|+.+++++++.+.+ +++ +..+.+.. .+.+ ..+ ..+++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKE-GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999884 99999999998877655 232 22222322 2111 111 12367
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|.++.+.|.
T Consensus 83 d~ii~~ag~ 91 (238)
T PRK05786 83 DGLVVTVGG 91 (238)
T ss_pred CEEEEcCCC
Confidence 999999884
No 155
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.00091 Score=56.02 Aligned_cols=73 Identities=21% Similarity=0.356 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEE-EcCCCcc-cc----c----cCCCccEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKEN-IE----D----LPEKFDVVF 219 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~-~~----~----~~~~~d~vi 219 (255)
.+++++|+||+|++|...++.+.. .|.+|+++++++++++.+.+.+.+.+ .|..+.. .. . ..+.+|++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~-~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQS-DGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 467899999999999999888877 49999999999988887776665433 3433321 11 1 124689999
Q ss_pred ECCC
Q 025278 220 DAVG 223 (255)
Q Consensus 220 d~~G 223 (255)
++.|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9987
No 156
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.38 E-value=0.0024 Score=50.74 Aligned_cols=100 Identities=17% Similarity=0.144 Sum_probs=71.3
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhH----HHHHHcCCCEE-EcCCCccc-cccCCC
Q 025278 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL----DLLRSLGADLA-IDYTKENI-EDLPEK 214 (255)
Q Consensus 141 ~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~----~~~~~~g~~~v-~~~~~~~~-~~~~~~ 214 (255)
..++...+++|++||=+| + +.|..++-+|+.. + +|+.+++.++=. +.++++|...+ +...+... -.....
T Consensus 63 ~m~~~L~~~~g~~VLEIG-t-GsGY~aAvla~l~-~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aP 138 (209)
T COG2518 63 RMLQLLELKPGDRVLEIG-T-GSGYQAAVLARLV-G-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAP 138 (209)
T ss_pred HHHHHhCCCCCCeEEEEC-C-CchHHHHHHHHHh-C-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCCCC
Confidence 345678899999999999 4 5699999999974 4 899999887733 33566886433 22222211 111246
Q ss_pred ccEEEECCCCccceeeeeeccccCCceEEEE
Q 025278 215 FDVVFDAVGKMCISIVYQKCDKFQEKSLINF 245 (255)
Q Consensus 215 ~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~ 245 (255)
+|.|+=+.+.+.....++..++ ++|+++.-
T Consensus 139 yD~I~Vtaaa~~vP~~Ll~QL~-~gGrlv~P 168 (209)
T COG2518 139 YDRIIVTAAAPEVPEALLDQLK-PGGRLVIP 168 (209)
T ss_pred cCEEEEeeccCCCCHHHHHhcc-cCCEEEEE
Confidence 9999999998888888888888 88987754
No 157
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.001 Score=55.51 Aligned_cols=72 Identities=18% Similarity=0.300 Sum_probs=52.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEE-EcCCCcc-ccc-------cCCCccEEEECC
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKEN-IED-------LPEKFDVVFDAV 222 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~-~~~-------~~~~~d~vid~~ 222 (255)
++++|+||+|++|...++.+.. .|.+|+++++++++.+.+.+.+...+ .|..+.. ..+ ..+++|++|++.
T Consensus 2 k~vlItGasggiG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKA-AGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 4799999999999999988887 49999999999888777666564433 3433321 111 124789999999
Q ss_pred CC
Q 025278 223 GK 224 (255)
Q Consensus 223 G~ 224 (255)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 83
No 158
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.28 E-value=0.0015 Score=55.25 Aligned_cols=98 Identities=16% Similarity=0.081 Sum_probs=61.6
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHc----CCC-EEEcCCCccccccCCCccEEEECC
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~~d~vid~~ 222 (255)
..++++|+-.| +|. |.+++.+++. +..++++++.++...+.+++. +.. .+............+.+|+|+...
T Consensus 157 ~~~g~~VLDvG-cGs-G~lai~aa~~-g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~ 233 (288)
T TIGR00406 157 DLKDKNVIDVG-CGS-GILSIAALKL-GAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANI 233 (288)
T ss_pred cCCCCEEEEeC-CCh-hHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEec
Confidence 45789999999 776 8888777764 456899999999888777542 221 111111101111234799999765
Q ss_pred CCc---cceeeeeeccccCCceEEEEeecc
Q 025278 223 GKM---CISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 223 G~~---~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
-.. .....+.+.++ ++|++++.|...
T Consensus 234 ~~~~l~~ll~~~~~~Lk-pgG~li~sgi~~ 262 (288)
T TIGR00406 234 LAEVIKELYPQFSRLVK-PGGWLILSGILE 262 (288)
T ss_pred CHHHHHHHHHHHHHHcC-CCcEEEEEeCcH
Confidence 432 22223356666 899999988754
No 159
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0014 Score=56.51 Aligned_cols=74 Identities=26% Similarity=0.453 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCEE---EcCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA---IDYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~v---~~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+||+|++|...++.+.. .|++|+++++++++++.+ ++.|.+.. .|..+.+ ..+ ..++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~-~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFAR-RGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 568999999999999999988887 499999999998887644 34554432 2332221 111 1257
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|+++|.
T Consensus 85 iD~lVnnAG~ 94 (330)
T PRK06139 85 IDVWVNNVGV 94 (330)
T ss_pred CCEEEECCCc
Confidence 8999999983
No 160
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.27 E-value=0.0031 Score=47.84 Aligned_cols=84 Identities=24% Similarity=0.304 Sum_probs=54.6
Q ss_pred HHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCEEEcCCCccccccCCCccEE
Q 025278 141 EGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVV 218 (255)
Q Consensus 141 ~~l~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~v 218 (255)
.+++...+ ..+++++|+| +|.+|...++.++..++.++++++++.++.+.+ ++++... +.....+..+..+++|+|
T Consensus 8 ~a~~~~~~~~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dvv 85 (155)
T cd01065 8 RALEEAGIELKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLEELLAEADLI 85 (155)
T ss_pred HHHHhhCCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchhhccccCCEE
Confidence 34444333 4578999999 699999988888774236788889988776654 5555421 001111223335689999
Q ss_pred EECCCCcc
Q 025278 219 FDAVGKMC 226 (255)
Q Consensus 219 id~~G~~~ 226 (255)
|.|++...
T Consensus 86 i~~~~~~~ 93 (155)
T cd01065 86 INTTPVGM 93 (155)
T ss_pred EeCcCCCC
Confidence 99998654
No 161
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0017 Score=52.94 Aligned_cols=74 Identities=31% Similarity=0.457 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCCCEE-EcCCCcc-ccc---cCCCccEEEECCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLA-IDYTKEN-IED---LPEKFDVVFDAVG 223 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~v-~~~~~~~-~~~---~~~~~d~vid~~G 223 (255)
.+++++|+|++|++|...++.+.. .|.+|+++++++++.+.+. +.+...+ .|..+.. ... ..+++|++|++.|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQ-RGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 568999999999999999999888 4899999999887776553 4444322 2333221 111 1246899999998
Q ss_pred C
Q 025278 224 K 224 (255)
Q Consensus 224 ~ 224 (255)
.
T Consensus 87 ~ 87 (245)
T PRK07060 87 I 87 (245)
T ss_pred C
Confidence 4
No 162
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0013 Score=55.67 Aligned_cols=74 Identities=28% Similarity=0.365 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCC--CEE---EcCCCcc-cc-------ccCCCc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA--DLA---IDYTKEN-IE-------DLPEKF 215 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~--~~v---~~~~~~~-~~-------~~~~~~ 215 (255)
.|++++|+|++|++|..+++.+.. .|++|+++++++++++.+ ++++. ... .|..+.. .. +..+.+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHA-RGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999998887 499999999998877654 45542 111 2332221 11 112478
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|++.|.
T Consensus 87 d~vI~nAG~ 95 (296)
T PRK05872 87 DVVVANAGI 95 (296)
T ss_pred CEEEECCCc
Confidence 999999994
No 163
>PRK06182 short chain dehydrogenase; Validated
Probab=97.21 E-value=0.002 Score=53.73 Aligned_cols=74 Identities=27% Similarity=0.368 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEE-EcCCCcc-ccc-------cCCCccEEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKEN-IED-------LPEKFDVVFD 220 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~-~~~-------~~~~~d~vid 220 (255)
.+++++|+|++|++|...++.+.. .|.+|+++++++++++.+.+.+...+ .|..+.. ... ...++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~-~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAA-QGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 467999999999999999988877 49999999999888776655554332 3333322 111 1247999999
Q ss_pred CCCC
Q 025278 221 AVGK 224 (255)
Q Consensus 221 ~~G~ 224 (255)
+.|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9984
No 164
>PRK04148 hypothetical protein; Provisional
Probab=97.20 E-value=0.0018 Score=47.85 Aligned_cols=51 Identities=22% Similarity=0.286 Sum_probs=39.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEc
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID 202 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~ 202 (255)
..+.++++.| +| .|...+..+..+ |.+|+++|.+++..+.+++.+.+.+.+
T Consensus 15 ~~~~kileIG-~G-fG~~vA~~L~~~-G~~ViaIDi~~~aV~~a~~~~~~~v~d 65 (134)
T PRK04148 15 GKNKKIVELG-IG-FYFKVAKKLKES-GFDVIVIDINEKAVEKAKKLGLNAFVD 65 (134)
T ss_pred ccCCEEEEEE-ec-CCHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhCCeEEEC
Confidence 4568899999 88 887545455554 999999999999999998888665543
No 165
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.17 E-value=0.0018 Score=50.52 Aligned_cols=92 Identities=22% Similarity=0.191 Sum_probs=61.7
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcc---ccccCCCccEEEECCCCccc---
Q 025278 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDLPEKFDVVFDAVGKMCI--- 227 (255)
Q Consensus 154 VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~~d~vid~~G~~~~--- 227 (255)
|+|+||+|.+|...++.+... +.+|+++.|++++.+. ..+.+. +..+-.+ +.+..+++|+||.+.|....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~-~~~V~~~~R~~~~~~~--~~~~~~-~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~ 76 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR-GHEVTALVRSPSKAED--SPGVEI-IQGDLFDPDSVKAALKGADAVIHAAGPPPKDVD 76 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TSEEEEEESSGGGHHH--CTTEEE-EESCTTCHHHHHHHHTTSSEEEECCHSTTTHHH
T ss_pred eEEECCCChHHHHHHHHHHHC-CCEEEEEecCchhccc--cccccc-ceeeehhhhhhhhhhhhcchhhhhhhhhccccc
Confidence 789999999999999999984 8999999999998877 444443 3332222 23335699999999984332
Q ss_pred -eeeeeeccccC-CceEEEEeecc
Q 025278 228 -SIVYQKCDKFQ-EKSLINFGLFR 249 (255)
Q Consensus 228 -~~~~~~~~~~~-~G~~v~~G~~~ 249 (255)
.....+.++.. -.+++.++..+
T Consensus 77 ~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 77 AAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccceeeeccc
Confidence 11222222211 24778777665
No 166
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.16 E-value=0.0027 Score=50.28 Aligned_cols=76 Identities=28% Similarity=0.331 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-Hc----CCCEE-EcCCC-ccccccCCCccEEEECC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL----GADLA-IDYTK-ENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~----g~~~v-~~~~~-~~~~~~~~~~d~vid~~ 222 (255)
.+.+++|+|++|++|..++..+.. .+.+++++.++.++.+.+. ++ +.... .+..+ ++..+...++|+||.++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~-~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAR-EGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 568999999889999988887776 4889999999888776553 22 32211 12211 22223345789999987
Q ss_pred CCcc
Q 025278 223 GKMC 226 (255)
Q Consensus 223 G~~~ 226 (255)
....
T Consensus 106 ~~g~ 109 (194)
T cd01078 106 AAGV 109 (194)
T ss_pred CCCc
Confidence 7444
No 167
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0024 Score=52.68 Aligned_cols=74 Identities=22% Similarity=0.353 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCE-EEcCCCcc-ccc-------cCCCccEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKEN-IED-------LPEKFDVVF 219 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-v~~~~~~~-~~~-------~~~~~d~vi 219 (255)
.|++|+|+||+|++|...++.+.. .|++++++++++++.+.. ++++... ..|..+.. ... ..+++|++|
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAA-EGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 578999999999999999988887 499999999988776554 3454322 22333221 111 124689999
Q ss_pred ECCCC
Q 025278 220 DAVGK 224 (255)
Q Consensus 220 d~~G~ 224 (255)
.++|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06057 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 99984
No 168
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0027 Score=52.85 Aligned_cols=74 Identities=24% Similarity=0.326 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCEE--EcCCCcc-c-------cccCCCccEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA--IDYTKEN-I-------EDLPEKFDVV 218 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~v--~~~~~~~-~-------~~~~~~~d~v 218 (255)
.+++++|+||+|++|...++.+.. .|++++++++++++++.+ ++++...+ .|..+.+ + .+...++|++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAA-LGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 367999999999999998887777 499999999998887654 34441222 2332221 1 1112478999
Q ss_pred EECCCC
Q 025278 219 FDAVGK 224 (255)
Q Consensus 219 id~~G~ 224 (255)
|++.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999984
No 169
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.12 E-value=0.0023 Score=45.63 Aligned_cols=92 Identities=26% Similarity=0.296 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH-c---C--CCE-EEcCCCccccccCCCccEEEECC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L---G--ADL-AIDYTKENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~---g--~~~-v~~~~~~~~~~~~~~~d~vid~~ 222 (255)
|+.+||-+| +| .|.++..+++...+.++++++.+++-++.+++ . + ... ++..+-....+..+.+|+|+...
T Consensus 1 p~~~vLDlG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 78 (112)
T PF12847_consen 1 PGGRVLDLG-CG-TGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSG 78 (112)
T ss_dssp TTCEEEEET-TT-TSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECS
T ss_pred CCCEEEEEc-Cc-CCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECC
Confidence 678999998 44 48888889985469999999999998888753 2 2 222 22222201122345799999876
Q ss_pred -CCccc---------eeeeeeccccCCceEEE
Q 025278 223 -GKMCI---------SIVYQKCDKFQEKSLIN 244 (255)
Q Consensus 223 -G~~~~---------~~~~~~~~~~~~G~~v~ 244 (255)
..... ...+.+.++ ++|+++.
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~L~-pgG~lvi 109 (112)
T PF12847_consen 79 FTLHFLLPLDERRRVLERIRRLLK-PGGRLVI 109 (112)
T ss_dssp GSGGGCCHHHHHHHHHHHHHHHEE-EEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcC-CCcEEEE
Confidence 22211 233455666 7888775
No 170
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.10 E-value=0.0032 Score=52.18 Aligned_cols=74 Identities=27% Similarity=0.381 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCCC-EEE--cCCCcc-ccc-------cCCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTKEN-IED-------LPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~v~--~~~~~~-~~~-------~~~~~d~ 217 (255)
.+++++|+|+++++|...++.+.. .|++|+++++++++.+.+. +++.. ..+ |..+.. ... ..+.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLA-EGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 578999999999999998888887 4999999999988776654 34421 222 222211 111 1246899
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|+++|.
T Consensus 84 li~~ag~ 90 (263)
T PRK06200 84 FVGNAGI 90 (263)
T ss_pred EEECCCC
Confidence 9999983
No 171
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.10 E-value=0.0038 Score=53.50 Aligned_cols=99 Identities=19% Similarity=0.199 Sum_probs=66.3
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC--CcEEEEecChhhHHHHH----HcCCCEE--EcCCCccccccCC
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLR----SLGADLA--IDYTKENIEDLPE 213 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~~~~ 213 (255)
.++...++++++||.+| +| .|..++.+++.. + .+|++++.+++..+.++ +.|.+.+ +..+........+
T Consensus 72 ll~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~-~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~ 148 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIG-GG-TGYNAAVMSRVV-GEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFA 148 (322)
T ss_pred HHHhcCCCCCCEEEEEe-CC-ccHHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccC
Confidence 33556788999999999 65 599999999875 4 36899999998776654 3565433 2221111111124
Q ss_pred CccEEEECCCCccceeeeeeccccCCceEEE
Q 025278 214 KFDVVFDAVGKMCISIVYQKCDKFQEKSLIN 244 (255)
Q Consensus 214 ~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~ 244 (255)
.+|+|+.+.|.......+.+.++ ++|+++.
T Consensus 149 ~fD~Ii~~~g~~~ip~~~~~~Lk-pgG~Lvv 178 (322)
T PRK13943 149 PYDVIFVTVGVDEVPETWFTQLK-EGGRVIV 178 (322)
T ss_pred CccEEEECCchHHhHHHHHHhcC-CCCEEEE
Confidence 69999998886555555566666 7898776
No 172
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.09 E-value=0.0025 Score=59.93 Aligned_cols=75 Identities=20% Similarity=0.387 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh---------------------hHHHHHHcCCCEEEcCCC---
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---------------------KLDLLRSLGADLAIDYTK--- 205 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~---------------------~~~~~~~~g~~~v~~~~~--- 205 (255)
.+++|+|+| +|+.|+.+++.++.. |.+|+++++.+. +.+.++++|.+..++..-
T Consensus 309 ~~kkVaIIG-~GpaGl~aA~~L~~~-G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 386 (639)
T PRK12809 309 RSEKVAVIG-AGPAGLGCADILARA-GVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRD 386 (639)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHc-CCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCc
Confidence 489999999 899999999999985 999999987652 456678889887766532
Q ss_pred ccccccCCCccEEEECCCCcc
Q 025278 206 ENIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 206 ~~~~~~~~~~d~vid~~G~~~ 226 (255)
..+.+...++|.||.++|...
T Consensus 387 ~~~~~l~~~~DaV~latGa~~ 407 (639)
T PRK12809 387 ITFSDLTSEYDAVFIGVGTYG 407 (639)
T ss_pred CCHHHHHhcCCEEEEeCCCCC
Confidence 123333457999999999653
No 173
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0035 Score=53.02 Aligned_cols=74 Identities=26% Similarity=0.468 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCC-EEE--cCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+||+|++|...++.+.. .|.+|++++++.++++.+. +.+.+ ..+ |..+.. ..+ ..+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La~-~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFAR-RGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999998888877 4999999999988765542 22322 122 222211 111 1247
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|+++|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 174
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.09 E-value=0.0011 Score=51.32 Aligned_cols=95 Identities=19% Similarity=0.170 Sum_probs=62.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCC--CEEEcCCCccccccCCCccEEEECCCCcccee-
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--DLAIDYTKENIEDLPEKFDVVFDAVGKMCISI- 229 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~d~vid~~G~~~~~~- 229 (255)
.|.|+||+|-+|...++-|.. +|..|++++|++.|....+...+ ..+++... ..+...|+|+||++.|......
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~-RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~--~a~~l~g~DaVIsA~~~~~~~~~ 78 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALK-RGHEVTAIVRNASKLAARQGVTILQKDIFDLTS--LASDLAGHDAVISAFGAGASDND 78 (211)
T ss_pred eEEEEecCchhHHHHHHHHHh-CCCeeEEEEeChHhccccccceeecccccChhh--hHhhhcCCceEEEeccCCCCChh
Confidence 588999999999999999998 69999999999998865422110 01232211 1234569999999988552111
Q ss_pred e--------eeecccc-CCceEEEEeeccC
Q 025278 230 V--------YQKCDKF-QEKSLINFGLFRQ 250 (255)
Q Consensus 230 ~--------~~~~~~~-~~G~~v~~G~~~~ 250 (255)
. .+..++- ..-|+..+|..+.
T Consensus 79 ~~~~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 79 ELHSKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 1 2222221 2358888887664
No 175
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0032 Score=51.87 Aligned_cols=75 Identities=28% Similarity=0.417 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCC-CEEE--cCCCc-cccc-------cCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-DLAI--DYTKE-NIED-------LPE 213 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~-~~v~--~~~~~-~~~~-------~~~ 213 (255)
..+++++|+|++|++|..++..+... |++|+++.+++++++.+.+ .+. ..++ |..+. +..+ ..+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA-GAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 45789999999999999998888874 9999999999887655432 121 1222 22211 1111 123
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|++.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 68999999984
No 176
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.07 E-value=0.0055 Score=51.12 Aligned_cols=104 Identities=22% Similarity=0.318 Sum_probs=70.5
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCCEEEcCCCccccccCCCccEE
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDLPEKFDVV 218 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~d~v 218 (255)
++..++++|++||=+| +|- |.+++.+|+. ++++|+.++.|++..+.++ +.|...-+...-.++.+..+.+|-|
T Consensus 65 ~~kl~L~~G~~lLDiG-CGW-G~l~~~aA~~-y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~~e~fDrI 141 (283)
T COG2230 65 LEKLGLKPGMTLLDIG-CGW-GGLAIYAAEE-YGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDFEEPFDRI 141 (283)
T ss_pred HHhcCCCCCCEEEEeC-CCh-hHHHHHHHHH-cCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecccccccccccee
Confidence 3789999999999999 665 8888899998 5999999999999877764 4564411111112333333458877
Q ss_pred E-----ECCCC---ccceeeeeeccccCCceEEEEeeccC
Q 025278 219 F-----DAVGK---MCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 219 i-----d~~G~---~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
+ |.+|. +.-...+.+.++ ++|++.+......
T Consensus 142 vSvgmfEhvg~~~~~~ff~~~~~~L~-~~G~~llh~I~~~ 180 (283)
T COG2230 142 VSVGMFEHVGKENYDDFFKKVYALLK-PGGRMLLHSITGP 180 (283)
T ss_pred eehhhHHHhCcccHHHHHHHHHhhcC-CCceEEEEEecCC
Confidence 6 34554 223334466666 8999988776554
No 177
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0029 Score=52.15 Aligned_cols=73 Identities=21% Similarity=0.270 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh-hhHHHHHHcCCCEE--EcCCCc-cccccCCCccEEEECCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLA--IDYTKE-NIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~~~~g~~~v--~~~~~~-~~~~~~~~~d~vid~~G~ 224 (255)
.+++++|+||+|++|...++.+.. .|.+|+++++++ ++.+.... +.... .|..+. ...+..+.+|++|+++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~-~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRA-KGAKVIGLTHSKINNSESNDE-SPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHH-CCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 368999999999999998887777 499999998876 33222111 11122 232222 122234579999999984
No 178
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0038 Score=51.74 Aligned_cols=74 Identities=20% Similarity=0.322 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-H---cCCC-EE--EcCCCcccc-c-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-S---LGAD-LA--IDYTKENIE-D-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~---~g~~-~v--~~~~~~~~~-~-------~~~~ 214 (255)
++++++|+|++|++|...++.+.. .|++|+++++++++.+.+. + .+.. .+ .|..+.... + ..++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~-~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAE-AGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999998887 4999999999887765442 2 2322 22 233322211 0 1247
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|+++|.
T Consensus 88 id~vi~~Ag~ 97 (263)
T PRK07814 88 LDIVVNNVGG 97 (263)
T ss_pred CCEEEECCCC
Confidence 8999999884
No 179
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.04 E-value=0.0035 Score=52.36 Aligned_cols=73 Identities=26% Similarity=0.425 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-E----EcCCCccc-c-------ccC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-A----IDYTKENI-E-------DLP 212 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v----~~~~~~~~-~-------~~~ 212 (255)
.++.|+|+||++++|..++.-.... |++++.+.+..++++.+ ++.+... + .|-.+.+. . ...
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~-G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKR-GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC-CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 5789999999999998755555443 99999998888877766 3444322 1 12222211 1 124
Q ss_pred CCccEEEECCC
Q 025278 213 EKFDVVFDAVG 223 (255)
Q Consensus 213 ~~~d~vid~~G 223 (255)
+++|+.++..|
T Consensus 90 g~vDvLVNNAG 100 (282)
T KOG1205|consen 90 GRVDVLVNNAG 100 (282)
T ss_pred CCCCEEEecCc
Confidence 58999999998
No 180
>PRK06196 oxidoreductase; Provisional
Probab=97.02 E-value=0.0038 Score=53.32 Aligned_cols=74 Identities=18% Similarity=0.320 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCEEE--cCCCcc-cc-------ccCCCccEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAI--DYTKEN-IE-------DLPEKFDVV 218 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~v~--~~~~~~-~~-------~~~~~~d~v 218 (255)
.+++++|+||+|++|..++..+.. .|.+|+++++++++.+.+ +++..-..+ |..+.. .. +..+++|++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~-~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQ-AGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 468999999999999998887777 499999999988776554 233211222 222211 11 112479999
Q ss_pred EECCCC
Q 025278 219 FDAVGK 224 (255)
Q Consensus 219 id~~G~ 224 (255)
|+++|.
T Consensus 104 i~nAg~ 109 (315)
T PRK06196 104 INNAGV 109 (315)
T ss_pred EECCCC
Confidence 999984
No 181
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.00 E-value=0.0015 Score=51.11 Aligned_cols=67 Identities=19% Similarity=0.291 Sum_probs=47.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G 223 (255)
-.|++|.|+| .|.+|...++.++.+ |.+|++.+++..........+... . ++.+.....|+|+.+..
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~~~~~~~~~~~~~--~----~l~ell~~aDiv~~~~p 100 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAF-GMRVIGYDRSPKPEEGADEFGVEY--V----SLDELLAQADIVSLHLP 100 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSCHHHHHHHHTTEEE--S----SHHHHHHH-SEEEE-SS
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecC-CceeEEecccCChhhhccccccee--e----ehhhhcchhhhhhhhhc
Confidence 4689999999 999999999999995 999999999887666444554311 1 22333345677777766
No 182
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.00 E-value=0.0034 Score=52.79 Aligned_cols=73 Identities=26% Similarity=0.389 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHHH-HcCCCEEEcCCCccccccCCCccEEEECCCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~ 224 (255)
..+++++|+| +|++|.+++..++.. | .+++++.|+.++.+.+. +++....+.. ..+..+....+|+||+|+..
T Consensus 121 ~~~k~vlVlG-aGg~a~ai~~aL~~~-g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivInaTp~ 195 (278)
T PRK00258 121 LKGKRILILG-AGGAARAVILPLLDL-GVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELADFDLIINATSA 195 (278)
T ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhccccCCEEEECCcC
Confidence 4567899999 799999999988875 6 78999999988876653 4442110111 11122334579999999873
No 183
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.99 E-value=0.0031 Score=55.42 Aligned_cols=105 Identities=23% Similarity=0.364 Sum_probs=68.3
Q ss_pred HHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCcc
Q 025278 138 TAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD 216 (255)
Q Consensus 138 ta~~~l-~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d 216 (255)
..+..+ +...+++|++||-+| + +.|.++..+++. .+++|++++.+++.++.+++.....-++....++.+..+.+|
T Consensus 154 ~k~~~l~~~l~l~~g~rVLDIG-c-G~G~~a~~la~~-~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~l~~~fD 230 (383)
T PRK11705 154 AKLDLICRKLQLKPGMRVLDIG-C-GWGGLARYAAEH-YGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRDLNGQFD 230 (383)
T ss_pred HHHHHHHHHhCCCCCCEEEEeC-C-CccHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhhcCCCCC
Confidence 344444 567889999999999 5 468888888887 489999999999999988764321111111122223335689
Q ss_pred EEEEC-----CCC---ccceeeeeeccccCCceEEEEe
Q 025278 217 VVFDA-----VGK---MCISIVYQKCDKFQEKSLINFG 246 (255)
Q Consensus 217 ~vid~-----~G~---~~~~~~~~~~~~~~~G~~v~~G 246 (255)
.|+.. +|. ......+.+.++ ++|++++..
T Consensus 231 ~Ivs~~~~ehvg~~~~~~~l~~i~r~Lk-pGG~lvl~~ 267 (383)
T PRK11705 231 RIVSVGMFEHVGPKNYRTYFEVVRRCLK-PDGLFLLHT 267 (383)
T ss_pred EEEEeCchhhCChHHHHHHHHHHHHHcC-CCcEEEEEE
Confidence 88742 332 123344466677 889988754
No 184
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0045 Score=51.22 Aligned_cols=76 Identities=29% Similarity=0.426 Sum_probs=51.2
Q ss_pred cCCCCEEEEEcCCc-hHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH-----cCCCEE--E--cCCCcc-ccc------
Q 025278 148 FSAGKSILVLGGAG-GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-----LGADLA--I--DYTKEN-IED------ 210 (255)
Q Consensus 148 ~~~g~~VlI~ga~g-~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-----~g~~~v--~--~~~~~~-~~~------ 210 (255)
+..+++++|+|++| ++|.+.++.+... |++|+++++++++++...+ ++...+ + |..+.+ ...
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEE-GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 34578999999886 8999999988874 9999999988877654421 443222 2 322221 111
Q ss_pred -cCCCccEEEECCCC
Q 025278 211 -LPEKFDVVFDAVGK 224 (255)
Q Consensus 211 -~~~~~d~vid~~G~ 224 (255)
..+.+|++|++.|.
T Consensus 93 ~~~g~id~li~~ag~ 107 (262)
T PRK07831 93 ERLGRLDVLVNNAGL 107 (262)
T ss_pred HHcCCCCEEEECCCC
Confidence 12468999999984
No 185
>PRK12742 oxidoreductase; Provisional
Probab=96.98 E-value=0.0047 Score=50.15 Aligned_cols=74 Identities=26% Similarity=0.403 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec-ChhhHHHH-HHcCCCEE-EcCCCcc-ccc---cCCCccEEEECC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL-RSLGADLA-IDYTKEN-IED---LPEKFDVVFDAV 222 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~-~~~g~~~v-~~~~~~~-~~~---~~~~~d~vid~~ 222 (255)
.+++++|+|++|++|...++.+.. .|++++.+.+ ++++.+.+ ++++...+ .|..+.. +.+ ..+.+|++|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~-~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVT-DGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 478999999999999999988877 4888887754 45555443 45565432 2322211 111 124689999999
Q ss_pred CC
Q 025278 223 GK 224 (255)
Q Consensus 223 G~ 224 (255)
|.
T Consensus 84 g~ 85 (237)
T PRK12742 84 GI 85 (237)
T ss_pred CC
Confidence 84
No 186
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.98 E-value=0.0059 Score=47.57 Aligned_cols=98 Identities=18% Similarity=0.167 Sum_probs=63.2
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE--EEcCCCccccccCCCccE
Q 025278 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL--AIDYTKENIEDLPEKFDV 217 (255)
Q Consensus 144 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~--v~~~~~~~~~~~~~~~d~ 217 (255)
....+++|+.++=+| +| .|..++++++.-...+++++++++++.+.. ++||.+. ++..+.+..-.....+|.
T Consensus 28 s~L~~~~g~~l~DIG-aG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~~~da 105 (187)
T COG2242 28 SKLRPRPGDRLWDIG-AG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLPSPDA 105 (187)
T ss_pred HhhCCCCCCEEEEeC-CC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCCCCCE
Confidence 467889999888888 43 377777888665678999999999988776 4588663 344443332221226899
Q ss_pred EEECCCC--ccceeeeeeccccCCceEEE
Q 025278 218 VFDAVGK--MCISIVYQKCDKFQEKSLIN 244 (255)
Q Consensus 218 vid~~G~--~~~~~~~~~~~~~~~G~~v~ 244 (255)
+|=.-|. +.....+...++ ++|++|.
T Consensus 106 iFIGGg~~i~~ile~~~~~l~-~ggrlV~ 133 (187)
T COG2242 106 IFIGGGGNIEEILEAAWERLK-PGGRLVA 133 (187)
T ss_pred EEECCCCCHHHHHHHHHHHcC-cCCeEEE
Confidence 8843331 122233455556 7888775
No 187
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.98 E-value=0.0043 Score=51.37 Aligned_cols=74 Identities=26% Similarity=0.377 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH-cCCC-EEE--cCCCcc-ccc-------cCCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAI--DYTKEN-IED-------LPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~v~--~~~~~~-~~~-------~~~~~d~ 217 (255)
.+++++|+||+|++|...++.+.. .|.+|++++++.++.+.+++ .+.+ ..+ |..+.. ..+ ..+.+|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVA-EGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 478999999999999998888777 49999999998877766654 3322 112 322211 111 1246899
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|++.|.
T Consensus 83 li~~Ag~ 89 (262)
T TIGR03325 83 LIPNAGI 89 (262)
T ss_pred EEECCCC
Confidence 9999883
No 188
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.97 E-value=0.0044 Score=51.79 Aligned_cols=74 Identities=26% Similarity=0.287 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHhcCCcEEEEecChhhHH---HH-HHcCCCEEE--cCCCcc-cc-------ccCC
Q 025278 150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLD---LL-RSLGADLAI--DYTKEN-IE-------DLPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~~~~~---~~-~~~g~~~v~--~~~~~~-~~-------~~~~ 213 (255)
.++++||+|+++ ++|.+.++.+.. .|++|++..++++..+ .+ +++|....+ |-.+.. .. +..+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~-~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAA-QGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHh-CCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 578999999876 999998888777 4999999887653322 22 344543333 222211 11 1124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|+++|.
T Consensus 85 ~iD~lVnnAG~ 95 (271)
T PRK06505 85 KLDFVVHAIGF 95 (271)
T ss_pred CCCEEEECCcc
Confidence 79999999984
No 189
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=96.97 E-value=0.0038 Score=49.64 Aligned_cols=99 Identities=22% Similarity=0.269 Sum_probs=65.2
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEecChhhHHHHH----HcC-CCE--EEcCCCccc-cccCC
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLG-ADL--AIDYTKENI-EDLPE 213 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g-~~~--v~~~~~~~~-~~~~~ 213 (255)
+.+..+.++++|+-.| +|. |.+++.+++.++ +.++++++.+++..+.++ ++| .+. ++..+..+. .....
T Consensus 33 l~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~ 110 (198)
T PRK00377 33 LSKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINE 110 (198)
T ss_pred HHHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCC
Confidence 3567888999999999 777 999888888653 468999999998887664 455 232 222222221 12235
Q ss_pred CccEEEECCCCcc---ceeeeeeccccCCceEEE
Q 025278 214 KFDVVFDAVGKMC---ISIVYQKCDKFQEKSLIN 244 (255)
Q Consensus 214 ~~d~vid~~G~~~---~~~~~~~~~~~~~G~~v~ 244 (255)
.+|.||...+... ....+.+.++ ++|+++.
T Consensus 111 ~~D~V~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~ 143 (198)
T PRK00377 111 KFDRIFIGGGSEKLKEIISASWEIIK-KGGRIVI 143 (198)
T ss_pred CCCEEEECCCcccHHHHHHHHHHHcC-CCcEEEE
Confidence 7999998655322 2333455666 7899875
No 190
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0041 Score=50.27 Aligned_cols=72 Identities=19% Similarity=0.365 Sum_probs=49.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEE--EcCCCcc-ccc----c-CCCccEEEECCC
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA--IDYTKEN-IED----L-PEKFDVVFDAVG 223 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v--~~~~~~~-~~~----~-~~~~d~vid~~G 223 (255)
++++|+|++|++|...+..+... |.+|+++++++++.+.+++++.... .|-.+.. ..+ . ..++|++|.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLER-GWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhC-CCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 47999999999999988877774 9999999998877766655432222 2222211 111 1 136999999987
Q ss_pred C
Q 025278 224 K 224 (255)
Q Consensus 224 ~ 224 (255)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 4
No 191
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.96 E-value=0.00075 Score=56.49 Aligned_cols=100 Identities=23% Similarity=0.326 Sum_probs=58.2
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCCEEEcCCCccccccCCCccE
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDLPEKFDV 217 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~d~ 217 (255)
.++++++++|++||-+| +| -|.++..+|+.. |++|+.++.+++..+.++ +.|...-+.....++.+....+|.
T Consensus 54 ~~~~~~l~~G~~vLDiG-cG-wG~~~~~~a~~~-g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~~~~fD~ 130 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIG-CG-WGGLAIYAAERY-GCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRDLPGKFDR 130 (273)
T ss_dssp HHTTTT--TT-EEEEES--T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG---S-SE
T ss_pred HHHHhCCCCCCEEEEeC-CC-ccHHHHHHHHHc-CcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccccCCCCCE
Confidence 34788999999999999 66 688888899984 999999999999888774 355221111111234444458998
Q ss_pred EEE-----CCCCc---cceeeeeeccccCCceEEEE
Q 025278 218 VFD-----AVGKM---CISIVYQKCDKFQEKSLINF 245 (255)
Q Consensus 218 vid-----~~G~~---~~~~~~~~~~~~~~G~~v~~ 245 (255)
|+- .+|.. .....+.+.++ ++|++++=
T Consensus 131 IvSi~~~Ehvg~~~~~~~f~~~~~~Lk-pgG~~~lq 165 (273)
T PF02353_consen 131 IVSIEMFEHVGRKNYPAFFRKISRLLK-PGGRLVLQ 165 (273)
T ss_dssp EEEESEGGGTCGGGHHHHHHHHHHHSE-TTEEEEEE
T ss_pred EEEEechhhcChhHHHHHHHHHHHhcC-CCcEEEEE
Confidence 874 34422 22344566777 89998743
No 192
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.95 E-value=0.003 Score=54.00 Aligned_cols=71 Identities=23% Similarity=0.352 Sum_probs=52.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEE-cCCCc-cccccCCCccEEEECCCC
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKE-NIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~-~~~~~-~~~~~~~~~d~vid~~G~ 224 (255)
+|+|+||+|-+|...+..+... |.+|++++|+.++...+...+.+.+. |..+. .+.+..+++|+||.+++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDE-GYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence 6999999999999999888874 89999999987776655555654432 22222 233445689999998774
No 193
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.94 E-value=0.0042 Score=56.47 Aligned_cols=75 Identities=19% Similarity=0.240 Sum_probs=56.2
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCcc
Q 025278 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 147 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~ 226 (255)
.+.++++|+|.| .|..|++++.+++.. |++|++.|.++++.+.++++|...+ .... . .+....+|+||.+.|-+.
T Consensus 8 ~~~~~~~v~V~G-~G~sG~aa~~~L~~~-G~~v~~~D~~~~~~~~l~~~g~~~~-~~~~-~-~~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 8 PLLPGAPVLVAG-AGVTGRAVLAALTRF-GARPTVCDDDPDALRPHAERGVATV-STSD-A-VQQIADYALVVTSPGFRP 82 (488)
T ss_pred cccCCCeEEEEc-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHhCCCEEE-cCcc-h-HhHhhcCCEEEECCCCCC
Confidence 355789999999 999999999999984 9999999987777766777887443 2211 1 122346899999999543
No 194
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0048 Score=50.76 Aligned_cols=73 Identities=18% Similarity=0.357 Sum_probs=49.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCC-EEE--cCCCcc-ccc-------cCCCc
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTKEN-IED-------LPEKF 215 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~-~~~-------~~~~~ 215 (255)
|++++|+|++|++|...++.+.. .|.+|+++++++++.+.+. +.+.. ..+ |-.++. ... ..+.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~-~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAE-EGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 57899999999999999988887 4999999999887665442 22322 223 222211 111 12468
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|++.|.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999999884
No 195
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0056 Score=50.55 Aligned_cols=78 Identities=24% Similarity=0.295 Sum_probs=50.3
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhh-HHH----HHHcCC-C-EE--EcCCCcc-----cccc-
Q 025278 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDL----LRSLGA-D-LA--IDYTKEN-----IEDL- 211 (255)
Q Consensus 147 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~----~~~~g~-~-~v--~~~~~~~-----~~~~- 211 (255)
.+..+++|+|+||+|++|...++-+...++.+|+++++++++ ++. +++.+. + ++ .|..+.+ ..+.
T Consensus 4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 356788999999999999998876555345899999988765 433 233332 1 22 2332221 1111
Q ss_pred -CCCccEEEECCCC
Q 025278 212 -PEKFDVVFDAVGK 224 (255)
Q Consensus 212 -~~~~d~vid~~G~ 224 (255)
.+++|++|.+.|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 1479999998874
No 196
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0048 Score=50.78 Aligned_cols=74 Identities=22% Similarity=0.299 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-H---cCCCE-E--EcCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-S---LGADL-A--IDYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~---~g~~~-v--~~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+|+++++|...+..+.. .|.+|++++++.++.+.+. + .+.+. . .|..+.. ..+ ..+.
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVE-AGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999998888887 4999999999887765542 2 23221 1 2222211 111 1247
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 87 id~lv~~ag~ 96 (253)
T PRK05867 87 IDIAVCNAGI 96 (253)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 197
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.92 E-value=0.0035 Score=52.77 Aligned_cols=73 Identities=18% Similarity=0.098 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCE-E--EcCCCccccccCCCccEEEECCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-A--IDYTKENIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-v--~~~~~~~~~~~~~~~d~vid~~G~ 224 (255)
.+++++|+| +|+.+.+++..+..++..+++++.|+.+|.+.+ ++++... + +... .+.......+|+||+|++.
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~-~~~~~~~~~~DiVInaTp~ 200 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGD-SGGLAIEKAAEVLVSTVPA 200 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccch-hhhhhcccCCCEEEECCCC
Confidence 578999999 899999988888876334688889998887665 4444211 1 1110 1122223578999999874
No 198
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0056 Score=50.85 Aligned_cols=74 Identities=24% Similarity=0.341 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-Hc----CCC-EEE--cCCCcc-cccc------CCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL----GAD-LAI--DYTKEN-IEDL------PEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~----g~~-~v~--~~~~~~-~~~~------~~~ 214 (255)
.+++++|+|+++++|.+.++.+.. .|++|+++++++++++.+. ++ +.+ ..+ |-.+.. .... .++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLAR-AGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 478999999999999998888887 4999999999887765543 22 322 122 322221 1111 246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++++++|.
T Consensus 86 iD~lv~nag~ 95 (263)
T PRK08339 86 PDIFFFSTGG 95 (263)
T ss_pred CcEEEECCCC
Confidence 8999999984
No 199
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.89 E-value=0.013 Score=42.30 Aligned_cols=100 Identities=18% Similarity=0.216 Sum_probs=64.8
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCC--EEEcCCCcc-ccccCCCcc
Q 025278 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD--LAIDYTKEN-IEDLPEKFD 216 (255)
Q Consensus 144 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~--~v~~~~~~~-~~~~~~~~d 216 (255)
....+.++++|+-+| +|. |..+..+++...+.+++.++.++...+.++ +++.. .++..+..+ .....+.+|
T Consensus 13 ~~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 90 (124)
T TIGR02469 13 SKLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPD 90 (124)
T ss_pred HHcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCC
Confidence 445667788999999 655 999999998754678999999998877764 34432 222222111 112235799
Q ss_pred EEEECCCCcc---ceeeeeeccccCCceEEEEe
Q 025278 217 VVFDAVGKMC---ISIVYQKCDKFQEKSLINFG 246 (255)
Q Consensus 217 ~vid~~G~~~---~~~~~~~~~~~~~G~~v~~G 246 (255)
+|+-..+... ....+.+.++ ++|++++-.
T Consensus 91 ~v~~~~~~~~~~~~l~~~~~~Lk-~gG~li~~~ 122 (124)
T TIGR02469 91 RVFIGGSGGLLQEILEAIWRRLR-PGGRIVLNA 122 (124)
T ss_pred EEEECCcchhHHHHHHHHHHHcC-CCCEEEEEe
Confidence 9997543222 3444566677 789888754
No 200
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.87 E-value=0.019 Score=46.22 Aligned_cols=101 Identities=16% Similarity=0.066 Sum_probs=65.1
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEecChhhHHHHHH----cCCC--EEEcCCCccccccCCC
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEK 214 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~ 214 (255)
.+....++++++||-+| + +.|..++.+++..+ ..+++.++.+++-.+.+++ .|.+ .++..+..........
T Consensus 68 ~~~~l~~~~g~~VLdIG-~-GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~~ 145 (212)
T PRK13942 68 MCELLDLKEGMKVLEIG-T-GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENAP 145 (212)
T ss_pred HHHHcCCCCcCEEEEEC-C-cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCCC
Confidence 34556788999999998 4 45788888887642 2689999999987776643 3432 2232222111111247
Q ss_pred ccEEEECCCCccceeeeeeccccCCceEEEE
Q 025278 215 FDVVFDAVGKMCISIVYQKCDKFQEKSLINF 245 (255)
Q Consensus 215 ~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~ 245 (255)
+|+|+-..........+.+.++ ++|+++..
T Consensus 146 fD~I~~~~~~~~~~~~l~~~Lk-pgG~lvi~ 175 (212)
T PRK13942 146 YDRIYVTAAGPDIPKPLIEQLK-DGGIMVIP 175 (212)
T ss_pred cCEEEECCCcccchHHHHHhhC-CCcEEEEE
Confidence 9999865555555555667777 89997764
No 201
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0056 Score=50.69 Aligned_cols=74 Identities=27% Similarity=0.421 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-Hc-----CCCE-E--EcCCCcc-cc-------ccC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL-----GADL-A--IDYTKEN-IE-------DLP 212 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~-----g~~~-v--~~~~~~~-~~-------~~~ 212 (255)
.+++++|+||++++|...++.+.. .|++|+++++++++++.+. ++ +... . .|..+.+ .. +..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLE-AGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 478999999999999998888887 4999999999887765442 21 1111 1 2332221 11 112
Q ss_pred CCccEEEECCCC
Q 025278 213 EKFDVVFDAVGK 224 (255)
Q Consensus 213 ~~~d~vid~~G~ 224 (255)
+.+|++|+++|.
T Consensus 86 g~id~li~~Ag~ 97 (265)
T PRK07062 86 GGVDMLVNNAGQ 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 468999999984
No 202
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0063 Score=49.72 Aligned_cols=74 Identities=26% Similarity=0.342 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCE-EE--cCCCcc-c-------cccCCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AI--DYTKEN-I-------EDLPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-v~--~~~~~~-~-------~~~~~~~d~ 217 (255)
++++++|+||+|++|...++.+.. .|++++++++++++.+.+ ++++... .+ |..+.. . .+..+++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLA-EGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999999999999999988887 499999999987766554 4555432 22 222211 1 111246899
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|.+.|.
T Consensus 84 vi~~ag~ 90 (249)
T PRK06500 84 VFINAGV 90 (249)
T ss_pred EEECCCC
Confidence 9999884
No 203
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0049 Score=50.84 Aligned_cols=77 Identities=26% Similarity=0.307 Sum_probs=52.7
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH-cCCC--EE--EcCCCcc-ccc-------cCCC
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD--LA--IDYTKEN-IED-------LPEK 214 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~--~v--~~~~~~~-~~~-------~~~~ 214 (255)
.-++++++|+||+|++|..++..+.. .|.+|+.+++++++.+.+.+ .... .+ .|..+.. ..+ ...+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAE-AGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG 86 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35778999999999999999988887 59999999998776665543 2211 22 2322221 111 1247
Q ss_pred ccEEEECCCCc
Q 025278 215 FDVVFDAVGKM 225 (255)
Q Consensus 215 ~d~vid~~G~~ 225 (255)
+|+||.+.|..
T Consensus 87 ~d~vi~~ag~~ 97 (264)
T PRK12829 87 LDVLVNNAGIA 97 (264)
T ss_pred CCEEEECCCCC
Confidence 99999999854
No 204
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.85 E-value=0.0044 Score=56.06 Aligned_cols=76 Identities=24% Similarity=0.482 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh---------------------hhHHHHHHcCCCEEEcCCCc-
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST---------------------AKLDLLRSLGADLAIDYTKE- 206 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~---------------------~~~~~~~~~g~~~v~~~~~~- 206 (255)
..+++|+|+| +|+.|+.++..++.. |.+|++++..+ ...+.++++|.+..++....
T Consensus 139 ~~~~~V~IIG-~GpaGl~aA~~l~~~-G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~ 216 (467)
T TIGR01318 139 PTGKRVAVIG-AGPAGLACADILARA-GVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR 216 (467)
T ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC
Confidence 3678999999 899999999999984 99998887654 24566788998776654221
Q ss_pred --cccccCCCccEEEECCCCcc
Q 025278 207 --NIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 207 --~~~~~~~~~d~vid~~G~~~ 226 (255)
...+...++|.||.++|...
T Consensus 217 ~~~~~~~~~~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 DISLDDLLEDYDAVFLGVGTYR 238 (467)
T ss_pred ccCHHHHHhcCCEEEEEeCCCC
Confidence 11222247999999999754
No 205
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.85 E-value=0.003 Score=53.33 Aligned_cols=148 Identities=22% Similarity=0.284 Sum_probs=80.5
Q ss_pred CCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHHhcccCCCCEEEEEcCCc
Q 025278 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161 (255)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlI~ga~g 161 (255)
+++|+|.+..+ .|.++-.-+...++.|.+++.+-..-- +.+- ..+..++. ..++|++||=.| +|
T Consensus 108 ~~vg~~~~I~P------------~w~~~~~~~~~~~I~idPg~AFGTG~H-~TT~-lcl~~l~~-~~~~g~~vLDvG-~G 171 (295)
T PF06325_consen 108 IRVGDRLVIVP------------SWEEYPEPPDEIVIEIDPGMAFGTGHH-PTTR-LCLELLEK-YVKPGKRVLDVG-CG 171 (295)
T ss_dssp EEECTTEEEEE------------TT----SSTTSEEEEESTTSSS-SSHC-HHHH-HHHHHHHH-HSSTTSEEEEES--T
T ss_pred EEECCcEEEEC------------CCcccCCCCCcEEEEECCCCcccCCCC-HHHH-HHHHHHHH-hccCCCEEEEeC-Cc
Confidence 55677666554 355552223456677777765422110 1111 12223322 267889999888 44
Q ss_pred hHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cC--CCEEEcCCCccccccCCCccEEEECCCCccceeee---e
Q 025278 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LG--ADLAIDYTKENIEDLPEKFDVVFDAVGKMCISIVY---Q 232 (255)
Q Consensus 162 ~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g--~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~~~~~---~ 232 (255)
.|.+++..++. +..+|+++|.++...+.+++ .| ....+. ...+.. ...+|+|+-..-.......+ .
T Consensus 172 -SGILaiaA~kl-GA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~-~~~~~~--~~~~dlvvANI~~~vL~~l~~~~~ 246 (295)
T PF06325_consen 172 -SGILAIAAAKL-GAKKVVAIDIDPLAVEAARENAELNGVEDRIEVS-LSEDLV--EGKFDLVVANILADVLLELAPDIA 246 (295)
T ss_dssp -TSHHHHHHHHT-TBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEES-CTSCTC--CS-EEEEEEES-HHHHHHHHHHCH
T ss_pred -HHHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEE-Eecccc--cccCCEEEECCCHHHHHHHHHHHH
Confidence 48888888875 56679999999887666643 22 222122 111111 25799999766544333332 3
Q ss_pred eccccCCceEEEEeeccCC
Q 025278 233 KCDKFQEKSLINFGLFRQE 251 (255)
Q Consensus 233 ~~~~~~~G~~v~~G~~~~~ 251 (255)
..++ ++|++++-|.....
T Consensus 247 ~~l~-~~G~lIlSGIl~~~ 264 (295)
T PF06325_consen 247 SLLK-PGGYLILSGILEEQ 264 (295)
T ss_dssp HHEE-EEEEEEEEEEEGGG
T ss_pred HhhC-CCCEEEEccccHHH
Confidence 3344 68999999987653
No 206
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.0071 Score=50.57 Aligned_cols=74 Identities=26% Similarity=0.289 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHc-CCCE-E--EcCCCcc-cccc-------CCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GADL-A--IDYTKEN-IEDL-------PEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-g~~~-v--~~~~~~~-~~~~-------~~~~d~ 217 (255)
.+++++|+|++|++|...++.+.. .|.+|+++++++++.+.+.+. +... . .|..+.. .... .+++|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~-~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALA-AGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHh-CcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 357899999999999998888877 499999999998887666543 2211 1 2322221 1111 136899
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|++.|.
T Consensus 82 vv~~ag~ 88 (277)
T PRK06180 82 LVNNAGY 88 (277)
T ss_pred EEECCCc
Confidence 9999985
No 207
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.0073 Score=49.63 Aligned_cols=74 Identities=23% Similarity=0.367 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCE--EE--cCCCcc-ccc-------cCCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL--AI--DYTKEN-IED-------LPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~--v~--~~~~~~-~~~-------~~~~~d~ 217 (255)
.+++++|+||+|++|...++.+.. .|.+|+++.++++..+...++.... .+ |..+.. ... ...++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~-~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAA-KGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 478999999999999998888877 4999999999877655554432211 22 222211 111 1246899
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999984
No 208
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.82 E-value=0.0065 Score=50.94 Aligned_cols=103 Identities=24% Similarity=0.371 Sum_probs=68.6
Q ss_pred CCCCEEEEEcCCchHHHH-HHHHHHHhcCCcEEEEecChhhHHHHH-----HcCC---CEEEcCCCcc--cccc---CC-
Q 025278 149 SAGKSILVLGGAGGVGTM-VIQLAKHVFGASKVAATSSTAKLDLLR-----SLGA---DLAIDYTKEN--IEDL---PE- 213 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~-a~~~a~~~~g~~vi~~~~~~~~~~~~~-----~~g~---~~v~~~~~~~--~~~~---~~- 213 (255)
+.|++.+|+||+.++|.+ +-++|+ +|.+++.+.|+++|++..+ +.++ .+++|...++ +++. ..
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk--rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~ 124 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK--RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG 124 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC
Confidence 457999999999999987 556666 4999999999999997652 3442 1346766555 3322 22
Q ss_pred -CccEEEECCCCcc-cee---------------------------eeeeccccCCceEEEEeeccCCCC
Q 025278 214 -KFDVVFDAVGKMC-ISI---------------------------VYQKCDKFQEKSLINFGLFRQEVP 253 (255)
Q Consensus 214 -~~d~vid~~G~~~-~~~---------------------------~~~~~~~~~~G~~v~~G~~~~~~~ 253 (255)
.+-+.+|++|-.. ... ....|.....|.++.+|.+.+..|
T Consensus 125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p 193 (312)
T KOG1014|consen 125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP 193 (312)
T ss_pred CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc
Confidence 4667888888322 110 023344435799999998887544
No 209
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.82 E-value=0.0076 Score=49.89 Aligned_cols=74 Identities=18% Similarity=0.168 Sum_probs=47.5
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHhcCCcEEEEecChhhH---HHH-HHcCCCEEEcCCCccccc----------cCC
Q 025278 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAKL---DLL-RSLGADLAIDYTKENIED----------LPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~~~---~~~-~~~g~~~v~~~~~~~~~~----------~~~ 213 (255)
.|++++|+||+ +++|.+.++.+... |++|++++++++.. +.+ ++++....+..+-.+..+ ..+
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~-G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRAL-GAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 57899999987 49999988877774 99999988875432 222 344432333222111111 124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|++.|.
T Consensus 88 ~ld~lv~nAg~ 98 (258)
T PRK07533 88 RLDFLLHSIAF 98 (258)
T ss_pred CCCEEEEcCcc
Confidence 68999999984
No 210
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0076 Score=52.03 Aligned_cols=74 Identities=18% Similarity=0.261 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCEE---EcCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA---IDYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~v---~~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+||+|++|...++.+.. .|++|+++++++++++.+ ++.|.+.. .|..+.. ... ..+.
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~-~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFAR-RGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 467999999999999999888877 499999999988876544 33454322 2332221 111 1247
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|+++|.
T Consensus 86 iD~lInnAg~ 95 (334)
T PRK07109 86 IDTWVNNAMV 95 (334)
T ss_pred CCEEEECCCc
Confidence 9999999984
No 211
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0077 Score=51.47 Aligned_cols=42 Identities=24% Similarity=0.316 Sum_probs=35.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (255)
.|++++|+||++++|...+..+.. .|++|+++.++.++.+.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~-~G~~Vil~~R~~~~~~~~ 54 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAA-AGAEVILPVRNRAKGEAA 54 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHH
Confidence 478999999999999998887776 499999999988776543
No 212
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.0082 Score=49.36 Aligned_cols=74 Identities=28% Similarity=0.479 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-EE--cCCCcc-cc-------ccCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTKEN-IE-------DLPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~-~~-------~~~~~ 214 (255)
.+++++|+|+++++|...+..+.. .|.+|+++++++++++.+ ++.+.+. .+ |..+.+ .. +..+.
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAR-EGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 467999999999999998888777 499999999988776654 2234222 22 222211 11 11247
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.++|.
T Consensus 84 id~li~~ag~ 93 (254)
T PRK07478 84 LDIAFNNAGT 93 (254)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 213
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0077 Score=49.52 Aligned_cols=73 Identities=25% Similarity=0.375 Sum_probs=49.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCCCE-E--EcCCCc-ccccc-CCCccEEEEC
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL-A--IDYTKE-NIEDL-PEKFDVVFDA 221 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~-v--~~~~~~-~~~~~-~~~~d~vid~ 221 (255)
++++||+|++|++|...++.+.. .|++|+++++++++.+.+++ .+... + .|..+. .+... ..++|++|.+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLAR-KGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 46899999999999999988887 49999999998776654432 23221 1 233222 11111 2379999999
Q ss_pred CCC
Q 025278 222 VGK 224 (255)
Q Consensus 222 ~G~ 224 (255)
+|.
T Consensus 81 ag~ 83 (257)
T PRK09291 81 AGI 83 (257)
T ss_pred CCc
Confidence 883
No 214
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.78 E-value=0.008 Score=49.17 Aligned_cols=74 Identities=24% Similarity=0.378 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE---EEcCCCc-cccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL---AIDYTKE-NIED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~---v~~~~~~-~~~~-------~~~~ 214 (255)
.+++++|+|++|++|..+++.+.. .|.+++.+++++++.+.+ ++.+... ..|-.+. ...+ ..++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~-~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQ-KGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999998887 489999999988766544 2334332 1222221 1111 1246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.++|.
T Consensus 83 id~vi~~ag~ 92 (253)
T PRK08217 83 LNGLINNAGI 92 (253)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 215
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.77 E-value=0.021 Score=50.69 Aligned_cols=97 Identities=16% Similarity=0.267 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHH-HHcCCCEEEcCCCccccccCCCccEEEECCCCcc
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~ 226 (255)
-.+.+|+|+| +|++|.+++..+... | .+++++.|+.+|.+.+ .+++...++.. ++..+....+|+||+|++++.
T Consensus 179 l~~kkvlviG-aG~~a~~va~~L~~~-g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--~~l~~~l~~aDiVI~aT~a~~ 254 (414)
T PRK13940 179 ISSKNVLIIG-AGQTGELLFRHVTAL-APKQIMLANRTIEKAQKITSAFRNASAHYL--SELPQLIKKADIIIAAVNVLE 254 (414)
T ss_pred ccCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHhcCCeEecH--HHHHHHhccCCEEEECcCCCC
Confidence 4678999999 899999999888875 6 4677778888776554 55652223322 122333467999999999887
Q ss_pred ceeeeeeccccCCceEEEEeeccC
Q 025278 227 ISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 227 ~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
..... ...+-+.=.++-++.++.
T Consensus 255 ~vi~~-~~~~~~~~~~iDLavPRd 277 (414)
T PRK13940 255 YIVTC-KYVGDKPRVFIDISIPQA 277 (414)
T ss_pred eeECH-HHhCCCCeEEEEeCCCCC
Confidence 55442 222101113566666665
No 216
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0077 Score=49.84 Aligned_cols=74 Identities=19% Similarity=0.262 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-Hc--CCC-EEEcCCCcccccc---------CCCcc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL--GAD-LAIDYTKENIEDL---------PEKFD 216 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~--g~~-~v~~~~~~~~~~~---------~~~~d 216 (255)
++++++|+||+|++|...+..+.. .|.+|+++++++++.+.+. ++ +.. ..+..+-.+..+. .+.+|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAA-AGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 467899999999999998888877 4999999999988776553 22 211 1222111111110 24689
Q ss_pred EEEECCCC
Q 025278 217 VVFDAVGK 224 (255)
Q Consensus 217 ~vid~~G~ 224 (255)
++|.++|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99999884
No 217
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.77 E-value=0.0084 Score=48.14 Aligned_cols=100 Identities=19% Similarity=0.119 Sum_probs=63.4
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHH----HHcCCCE--EEcCCCccccccCCC
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL----RSLGADL--AIDYTKENIEDLPEK 214 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~----~~~g~~~--v~~~~~~~~~~~~~~ 214 (255)
.++...+++|++||-+| + +.|..++.+++..+. .+|+.++++++-.+.+ ++++.+. ++..+...-......
T Consensus 64 ~l~~L~l~pg~~VLeIG-t-GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~ap 141 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIG-T-GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAP 141 (209)
T ss_dssp HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-S
T ss_pred HHHHHhcCCCCEEEEec-C-CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCC
Confidence 45667799999999999 3 458888888887632 3588888888755544 4456432 222221111111247
Q ss_pred ccEEEECCCCccceeeeeeccccCCceEEE
Q 025278 215 FDVVFDAVGKMCISIVYQKCDKFQEKSLIN 244 (255)
Q Consensus 215 ~d~vid~~G~~~~~~~~~~~~~~~~G~~v~ 244 (255)
+|.|+=+.+.+.....+.+.++ .+|+++.
T Consensus 142 fD~I~v~~a~~~ip~~l~~qL~-~gGrLV~ 170 (209)
T PF01135_consen 142 FDRIIVTAAVPEIPEALLEQLK-PGGRLVA 170 (209)
T ss_dssp EEEEEESSBBSS--HHHHHTEE-EEEEEEE
T ss_pred cCEEEEeeccchHHHHHHHhcC-CCcEEEE
Confidence 9999998887777777778787 8899887
No 218
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0084 Score=49.65 Aligned_cols=74 Identities=26% Similarity=0.288 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCE-E--EcCCCcc-ccc-------cCCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-A--IDYTKEN-IED-------LPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-v--~~~~~~~-~~~-------~~~~~d~ 217 (255)
.+++++|+|++|++|...+..+.. .|++|+++++++++.+.+ ++++... . .|..+.. ..+ ..+.+|+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVA-AGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999999999999998888877 499999999988766554 4555321 2 2322221 111 1246899
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|++.|.
T Consensus 84 lv~~ag~ 90 (261)
T PRK08265 84 LVNLACT 90 (261)
T ss_pred EEECCCC
Confidence 9999884
No 219
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.77 E-value=0.0083 Score=49.04 Aligned_cols=74 Identities=20% Similarity=0.337 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcC--CC-EEE--cCCCcc-ccc-------cCCCc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLG--AD-LAI--DYTKEN-IED-------LPEKF 215 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g--~~-~v~--~~~~~~-~~~-------~~~~~ 215 (255)
.+++++|+||+|++|...++.+.. .|.+|+++++++++.+.+ ..+. .. ..+ |..+.. +.. ....+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAA-EGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 467999999999999998888877 499999999998776554 2322 11 122 222111 111 12368
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|.+.|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999999984
No 220
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.76 E-value=0.0065 Score=50.95 Aligned_cols=72 Identities=22% Similarity=0.274 Sum_probs=49.1
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCCCE----EEcCCCccccccCCCccEEEECC
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADL----AIDYTKENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~----v~~~~~~~~~~~~~~~d~vid~~ 222 (255)
..+|++++|.| +|+.+.+++..++..+..+++++.|+.+|.+.+. .++... ..... +... ...+|++|||+
T Consensus 123 ~~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~--~~~~-~~~~dliINaT 198 (283)
T COG0169 123 DVTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALA--DLEG-LEEADLLINAT 198 (283)
T ss_pred ccCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccc--cccc-ccccCEEEECC
Confidence 34689999999 8999999888888863367888899999877664 444211 11111 1111 11589999998
Q ss_pred C
Q 025278 223 G 223 (255)
Q Consensus 223 G 223 (255)
.
T Consensus 199 p 199 (283)
T COG0169 199 P 199 (283)
T ss_pred C
Confidence 7
No 221
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.75 E-value=0.0088 Score=48.91 Aligned_cols=74 Identities=26% Similarity=0.366 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhh--HHHHHHcCCC-EEE--cCCCcc-cc-------ccCCCcc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLLRSLGAD-LAI--DYTKEN-IE-------DLPEKFD 216 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~--~~~~~~~g~~-~v~--~~~~~~-~~-------~~~~~~d 216 (255)
.+++++|+|++|++|...+..+.. .|.+|+++++++.. .+.+++.+.. ..+ |..+.. .. +..+++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~-~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAE-AGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999998888877 49999999886521 2233444432 222 222211 11 1124699
Q ss_pred EEEECCCC
Q 025278 217 VVFDAVGK 224 (255)
Q Consensus 217 ~vid~~G~ 224 (255)
++|++.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99999884
No 222
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0094 Score=48.35 Aligned_cols=74 Identities=22% Similarity=0.326 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCC---CEEE--cCCCcc-ccc-------cCCCc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA---DLAI--DYTKEN-IED-------LPEKF 215 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~---~~v~--~~~~~~-~~~-------~~~~~ 215 (255)
.+++++|+||+|.+|...++.+.. .|.+|+++++++++.+.+ +++.. -+.+ |..+.. +.+ ...++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLA-EGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-CCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999988877 499999999988776554 33321 1222 222211 111 12378
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|++.|.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999999874
No 223
>PRK06194 hypothetical protein; Provisional
Probab=96.73 E-value=0.01 Score=49.73 Aligned_cols=74 Identities=24% Similarity=0.395 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHc---CCCE-EEcCCCcccc---cc-------CCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSL---GADL-AIDYTKENIE---DL-------PEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~---g~~~-v~~~~~~~~~---~~-------~~~ 214 (255)
.++++||+||+|++|...+..+.. .|++|++++++.++++.. +++ +... ++..+-.+.. +. .+.
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAA-LGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHH-CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999998888777 499999999887665443 222 3322 2222211111 11 236
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 224
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.01 Score=49.22 Aligned_cols=75 Identities=27% Similarity=0.381 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCC-EE--EcCCCcc-ccc-------cCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD-LA--IDYTKEN-IED-------LPE 213 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~-~v--~~~~~~~-~~~-------~~~ 213 (255)
.++++++|+||+|++|...++.+.. .|++|+++++++++.+.. .+.+.. .. .|..+.. ... ..+
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFAR-AGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999888877 499999999987765433 222322 12 2332221 111 124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
++|++|.+.|.
T Consensus 86 ~iD~vi~~ag~ 96 (264)
T PRK07576 86 PIDVLVSGAAG 96 (264)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 225
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.72 E-value=0.01 Score=49.68 Aligned_cols=74 Identities=22% Similarity=0.286 Sum_probs=48.2
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHhcCCcEEEEecChh---hHHHH-HHcCCCEEE--cCCCcc-cc-------ccCC
Q 025278 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTA---KLDLL-RSLGADLAI--DYTKEN-IE-------DLPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~---~~~~~-~~~g~~~v~--~~~~~~-~~-------~~~~ 213 (255)
.+++++|+||+ +++|.+.++.+.. .|++|++..++++ +.+.+ ++++....+ |-.+.. .. +..+
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~-~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFE-QGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHH-CCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47899999986 7999998887777 4999999888742 33333 345533332 332221 11 1124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|++.|.
T Consensus 83 ~iDilVnnAG~ 93 (274)
T PRK08415 83 KIDFIVHSVAF 93 (274)
T ss_pred CCCEEEECCcc
Confidence 78999999984
No 226
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.71 E-value=0.011 Score=48.87 Aligned_cols=71 Identities=21% Similarity=0.325 Sum_probs=47.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-H---cCCCEEE--cCCCcc-cc-------ccCCCccEE
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-S---LGADLAI--DYTKEN-IE-------DLPEKFDVV 218 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~---~g~~~v~--~~~~~~-~~-------~~~~~~d~v 218 (255)
+++|+|+++++|...++.+.. .|++|+++++++++++.+. + .+..+.+ |..+.. .. +..+++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLK-KGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 689999999999998887777 4899999999887765442 2 2322222 222211 11 112479999
Q ss_pred EECCCC
Q 025278 219 FDAVGK 224 (255)
Q Consensus 219 id~~G~ 224 (255)
|++.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 999984
No 227
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0093 Score=48.26 Aligned_cols=74 Identities=20% Similarity=0.294 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCEE-EcCCCcc-ccc-------cCCCcc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-IDYTKEN-IED-------LPEKFD 216 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~v-~~~~~~~-~~~-------~~~~~d 216 (255)
+++++||+|++|.+|..+++.+.+ .|++|+++++++++.... +..+...+ .|..+.. ... ..+++|
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAA-RGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHH-CCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 478999999999999999888877 499999999977654322 22333221 2222211 111 123789
Q ss_pred EEEECCCC
Q 025278 217 VVFDAVGK 224 (255)
Q Consensus 217 ~vid~~G~ 224 (255)
+||.+.|.
T Consensus 85 ~vi~~ag~ 92 (239)
T PRK12828 85 ALVNIAGA 92 (239)
T ss_pred EEEECCcc
Confidence 99999884
No 228
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0096 Score=49.15 Aligned_cols=74 Identities=30% Similarity=0.396 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-Hc-----CCC-EEE--cCCCcc-ccc-------cC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL-----GAD-LAI--DYTKEN-IED-------LP 212 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~-----g~~-~v~--~~~~~~-~~~-------~~ 212 (255)
.+++++|+|+++++|...+..+.. .|++|+++++++++.+.+. ++ +.. ..+ |..+.. ... ..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~-~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAR-EGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 468999999999999998888877 4999999999887765442 22 221 122 222211 111 12
Q ss_pred CCccEEEECCCC
Q 025278 213 EKFDVVFDAVGK 224 (255)
Q Consensus 213 ~~~d~vid~~G~ 224 (255)
+.+|++|++.|.
T Consensus 85 g~id~li~~ag~ 96 (260)
T PRK07063 85 GPLDVLVNNAGI 96 (260)
T ss_pred CCCcEEEECCCc
Confidence 478999999984
No 229
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.70 E-value=0.0074 Score=56.94 Aligned_cols=76 Identities=20% Similarity=0.416 Sum_probs=54.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh---------------------hHHHHHHcCCCEEEcCCC--
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---------------------KLDLLRSLGADLAIDYTK-- 205 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~---------------------~~~~~~~~g~~~v~~~~~-- 205 (255)
..+++|+|+| +|+.|+.++..++.. |.+|+++++.+. +.+.++++|.+...+..-
T Consensus 325 ~~~~~VaIIG-aGpAGLsaA~~L~~~-G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~ 402 (654)
T PRK12769 325 KSDKRVAIIG-AGPAGLACADVLARN-GVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGK 402 (654)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCC
Confidence 3588999999 899999999999985 999999987542 345567788765544321
Q ss_pred -ccccccCCCccEEEECCCCcc
Q 025278 206 -ENIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 206 -~~~~~~~~~~d~vid~~G~~~ 226 (255)
....+...++|.||.++|...
T Consensus 403 ~i~~~~~~~~~DavilAtGa~~ 424 (654)
T PRK12769 403 DISLESLLEDYDAVFVGVGTYR 424 (654)
T ss_pred cCCHHHHHhcCCEEEEeCCCCC
Confidence 112222347999999999643
No 230
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.70 E-value=0.01 Score=50.83 Aligned_cols=73 Identities=19% Similarity=0.299 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcC---CC-EE--EcCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLG---AD-LA--IDYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g---~~-~v--~~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+||+|++|...++.+.. .|.+|++++++.++.+.+ +++. .. .. .|-.+.. ... ....
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAK-RGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 468999999999999998887777 489999999988876554 3332 11 11 2222211 111 1235
Q ss_pred ccEEEECCC
Q 025278 215 FDVVFDAVG 223 (255)
Q Consensus 215 ~d~vid~~G 223 (255)
+|++|+++|
T Consensus 84 iD~li~nAg 92 (322)
T PRK07453 84 LDALVCNAA 92 (322)
T ss_pred ccEEEECCc
Confidence 899999998
No 231
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.013 Score=47.71 Aligned_cols=75 Identities=21% Similarity=0.245 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCCE-EE--cCCCcc-ccc-------cCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AI--DYTKEN-IED-------LPE 213 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~-~~~-------~~~ 213 (255)
..+++++|+|++|++|..++..+.. .|.+|+++++++++.+.+. +.+... .+ |-.+.+ ... ...
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAK-AGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3567899999999999998888877 4899999999887665442 223221 22 222211 111 123
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|.+.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 68999999984
No 232
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.011 Score=47.97 Aligned_cols=73 Identities=14% Similarity=0.160 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-EE--cCCCcc-ccc-------cCC-
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTKEN-IED-------LPE- 213 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~-~~~-------~~~- 213 (255)
.|++++|+|+++++|.+.+.-+.. .|++|+++.+++++++.+ ++.+.+. .+ |..+.. ... ..+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~-~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFAR-LGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999998777776 499999999988876544 2334332 22 222211 111 123
Q ss_pred CccEEEECCC
Q 025278 214 KFDVVFDAVG 223 (255)
Q Consensus 214 ~~d~vid~~G 223 (255)
.+|++|++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 6999999997
No 233
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.012 Score=49.32 Aligned_cols=74 Identities=27% Similarity=0.411 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-EE--cCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+|++|++|...+..+.. .|++|+++++++++++.+ ++.+.+. .+ |-.+.. ..+ ..+.
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~-~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFAR-RGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999998888877 499999999887766543 2234322 12 222211 111 1246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|++.|.
T Consensus 84 id~li~nAg~ 93 (275)
T PRK05876 84 VDVVFSNAGI 93 (275)
T ss_pred CCEEEECCCc
Confidence 8999999983
No 234
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.68 E-value=0.027 Score=48.50 Aligned_cols=97 Identities=12% Similarity=0.133 Sum_probs=62.3
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHH-HH----cCCCEEEcCCCccccccCCCccEEEE
Q 025278 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RS----LGADLAIDYTKENIEDLPEKFDVVFD 220 (255)
Q Consensus 147 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~-~~----~g~~~v~~~~~~~~~~~~~~~d~vid 220 (255)
..+..++++|+| +|..|...+..+....+. ++.+++++++|.+.+ ++ ++.... .. .+..+.....|+|+.
T Consensus 123 a~~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~--~~~~~~~~~aDiVi~ 198 (325)
T PRK08618 123 AREDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VV--NSADEAIEEADIIVT 198 (325)
T ss_pred cCCCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-Ee--CCHHHHHhcCCEEEE
Confidence 334567899999 999998776554433354 555778888876654 33 343321 12 223334468999999
Q ss_pred CCCCccceeeeeeccccCCceEEEEeeccC
Q 025278 221 AVGKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 221 ~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
|+++.... .. ..++ ++-.++.+|.+..
T Consensus 199 aT~s~~p~-i~-~~l~-~G~hV~~iGs~~p 225 (325)
T PRK08618 199 VTNAKTPV-FS-EKLK-KGVHINAVGSFMP 225 (325)
T ss_pred ccCCCCcc-hH-HhcC-CCcEEEecCCCCc
Confidence 99977533 33 6666 6667888888654
No 235
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.67 E-value=0.01 Score=49.17 Aligned_cols=74 Identities=26% Similarity=0.361 Sum_probs=46.2
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHhcCCcEEEEecChh---hHHHH-HHcCCCEE--EcCCCcc-cc-------ccCC
Q 025278 150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTA---KLDLL-RSLGADLA--IDYTKEN-IE-------DLPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~~---~~~~~-~~~g~~~v--~~~~~~~-~~-------~~~~ 213 (255)
.|++++|+||++ ++|.+.++.+.. .|++|++..++++ +.+.+ ++.|.... .|-.+.. .. +..+
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~-~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKK-HGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHH-cCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 578999999886 899998877666 4899988877642 22222 23353332 2332221 11 1124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|+++++.|.
T Consensus 86 ~iDilVnnag~ 96 (260)
T PRK06603 86 SFDFLLHGMAF 96 (260)
T ss_pred CccEEEEcccc
Confidence 69999999884
No 236
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.66 E-value=0.0053 Score=54.31 Aligned_cols=74 Identities=27% Similarity=0.375 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCC-EE--EcCCCc-cccccCCCccEEEECCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LA--IDYTKE-NIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~v--~~~~~~-~~~~~~~~~d~vid~~G~ 224 (255)
.+++++|+||+|++|.+.+..+.. .|.+|+++++++++++.. .+.+.. .. .|..+. ...+..+++|++|++.|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~-~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQ-QGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 478999999999999998887776 499999999887765432 221111 12 232222 122234579999999884
No 237
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.65 E-value=0.022 Score=47.70 Aligned_cols=75 Identities=11% Similarity=0.094 Sum_probs=49.8
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCCCEEEcCCCccccccCCCccEEE
Q 025278 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVF 219 (255)
Q Consensus 141 ~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~d~vi 219 (255)
.+++......+++++|+| +|+.+.+++..++.++..++.++.|+++|.+.+. +++... . ... ....+|+||
T Consensus 112 ~~L~~~~~~~~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~-~~~--~~~~~dlvI 183 (272)
T PRK12550 112 KLLASYQVPPDLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R-PDL--GGIEADILV 183 (272)
T ss_pred HHHHhcCCCCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h-hhc--ccccCCEEE
Confidence 344433444567999999 8999999888888763346888899988877653 444211 1 011 123589999
Q ss_pred ECCC
Q 025278 220 DAVG 223 (255)
Q Consensus 220 d~~G 223 (255)
+|+.
T Consensus 184 NaTp 187 (272)
T PRK12550 184 NVTP 187 (272)
T ss_pred ECCc
Confidence 9976
No 238
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.011 Score=48.58 Aligned_cols=74 Identities=23% Similarity=0.299 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH---cCCC-EEE--cCCCcc-ccc-------cCCCc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---LGAD-LAI--DYTKEN-IED-------LPEKF 215 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~---~g~~-~v~--~~~~~~-~~~-------~~~~~ 215 (255)
.+++++|+||+|++|...++.+.. .|++++++++++++.+..++ .+.. ..+ |..+.. ... ...++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAE-EGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-cCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 467999999999999998877777 49999999988877644433 3422 122 222211 111 12368
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999984
No 239
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.65 E-value=0.011 Score=48.53 Aligned_cols=74 Identities=23% Similarity=0.369 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-EE--cCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+|++|++|...++.+.. .|.+|+++++++++.+.+ ++.|... .+ |..+.. ..+ ....
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQ-AGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999999888877 499999999987765543 2223221 22 322211 111 1246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 88 ~d~li~~ag~ 97 (255)
T PRK07523 88 IDILVNNAGM 97 (255)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 240
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.012 Score=48.09 Aligned_cols=74 Identities=22% Similarity=0.307 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-H---cCCC-EEE--cCCCcc-cc-------ccCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-S---LGAD-LAI--DYTKEN-IE-------DLPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~---~g~~-~v~--~~~~~~-~~-------~~~~~ 214 (255)
.+++++|+|++|++|...+..+... |.+++++++++++.+.+. + .+.. ..+ |..+.. .. +..++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALARE-GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4688999999999999988888774 999999999876654332 2 2211 222 222211 11 11236
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.++|.
T Consensus 84 id~vi~~ag~ 93 (250)
T PRK07774 84 IDYLVNNAAI 93 (250)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 241
>PRK05717 oxidoreductase; Validated
Probab=96.64 E-value=0.012 Score=48.41 Aligned_cols=75 Identities=20% Similarity=0.272 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCC-EE--EcCCCcc-c----cc---cCCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LA--IDYTKEN-I----ED---LPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~v--~~~~~~~-~----~~---~~~~~d~ 217 (255)
.|++++|+|++|++|...+..+... |++|++++++.++.+.. ++++.. .. .|..+.. . .+ ..+.+|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4789999999999999988888774 89999998877665443 344422 12 2222211 1 11 1236899
Q ss_pred EEECCCCc
Q 025278 218 VFDAVGKM 225 (255)
Q Consensus 218 vid~~G~~ 225 (255)
+|.+.|..
T Consensus 88 li~~ag~~ 95 (255)
T PRK05717 88 LVCNAAIA 95 (255)
T ss_pred EEECCCcc
Confidence 99999843
No 242
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.64 E-value=0.02 Score=48.73 Aligned_cols=95 Identities=13% Similarity=0.123 Sum_probs=64.9
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHH-HHcC---CCEEEcCCCccccccCCCccEEEECC
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSLG---ADLAIDYTKENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~-~~~g---~~~v~~~~~~~~~~~~~~~d~vid~~ 222 (255)
-....+++|+| +|..|.+.+..+...++ .++.+..++++|.+.+ +++. .... ..+..+...+.|+|+.|+
T Consensus 122 ~~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~----~~~~~~av~~aDiVitaT 196 (304)
T PRK07340 122 PAPPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE----PLDGEAIPEAVDLVVTAT 196 (304)
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE----ECCHHHHhhcCCEEEEcc
Confidence 35667999999 89999998888865445 4577778988876654 4443 2211 123344456899999999
Q ss_pred CCccceeeeeeccccCCceEEEEeeccC
Q 025278 223 GKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 223 G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
.+..-.... ..+ ++-.+..+|.+..
T Consensus 197 ~s~~Pl~~~--~~~-~g~hi~~iGs~~p 221 (304)
T PRK07340 197 TSRTPVYPE--AAR-AGRLVVAVGAFTP 221 (304)
T ss_pred CCCCceeCc--cCC-CCCEEEecCCCCC
Confidence 977644433 355 6678888887654
No 243
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.64 E-value=0.022 Score=45.60 Aligned_cols=100 Identities=15% Similarity=0.027 Sum_probs=64.3
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEecChhhHHHHH----HcCCC---EEEcCCCccccccCCC
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGAD---LAIDYTKENIEDLPEK 214 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~~~~~ 214 (255)
++...++++++||=.| + +.|..++.+++.++ +.+++.++.+++-.+.++ +.+.. .++..+..........
T Consensus 65 ~~~l~~~~~~~VLDiG-~-GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~~~~ 142 (205)
T PRK13944 65 CELIEPRPGMKILEVG-T-GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKHAP 142 (205)
T ss_pred HHhcCCCCCCEEEEEC-c-CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCccCCC
Confidence 3556778999999998 4 44888877877642 468999999988766554 34432 2333322211111347
Q ss_pred ccEEEECCCCccceeeeeeccccCCceEEEE
Q 025278 215 FDVVFDAVGKMCISIVYQKCDKFQEKSLINF 245 (255)
Q Consensus 215 ~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~ 245 (255)
+|+|+-+.........+.+.++ ++|+++..
T Consensus 143 fD~Ii~~~~~~~~~~~l~~~L~-~gG~lvi~ 172 (205)
T PRK13944 143 FDAIIVTAAASTIPSALVRQLK-DGGVLVIP 172 (205)
T ss_pred ccEEEEccCcchhhHHHHHhcC-cCcEEEEE
Confidence 9999976665554555566677 88998763
No 244
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.014 Score=48.26 Aligned_cols=74 Identities=23% Similarity=0.390 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-Hc----CCC-EEE--cCCCcc-cc---ccCCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL----GAD-LAI--DYTKEN-IE---DLPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~----g~~-~v~--~~~~~~-~~---~~~~~~d~ 217 (255)
.+++++|+|+++++|...++.+... |++|+++++++++.+.+. ++ +.. ..+ |-.+.. .. +..+.+|+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAE-GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 4789999999999999988888774 899999999887765532 22 322 222 222111 11 11347999
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|.+.|.
T Consensus 85 lv~~ag~ 91 (259)
T PRK06125 85 LVNNAGA 91 (259)
T ss_pred EEECCCC
Confidence 9999884
No 245
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.63 E-value=0.0045 Score=54.07 Aligned_cols=83 Identities=27% Similarity=0.344 Sum_probs=58.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcC---C-CEEEcCCCc-cccccCCCccEEEECCCCcc
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG---A-DLAIDYTKE-NIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g---~-~~v~~~~~~-~~~~~~~~~d~vid~~G~~~ 226 (255)
++|||+| +|.+|+.+++.+.+.+..+|.+.+|+.++++.+.... . ...+|..+. ...+..++.|+||++.+...
T Consensus 2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~ 80 (389)
T COG1748 2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV 80 (389)
T ss_pred CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence 5789999 7999999999977643389999999999998886553 1 233444333 23344567899999998666
Q ss_pred ceeeeeecc
Q 025278 227 ISIVYQKCD 235 (255)
Q Consensus 227 ~~~~~~~~~ 235 (255)
.......++
T Consensus 81 ~~~i~ka~i 89 (389)
T COG1748 81 DLTILKACI 89 (389)
T ss_pred hHHHHHHHH
Confidence 554444444
No 246
>PRK08643 acetoin reductase; Validated
Probab=96.63 E-value=0.012 Score=48.36 Aligned_cols=73 Identities=18% Similarity=0.226 Sum_probs=49.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCCE-EE--cCCCcc-cc----c---cCCCc
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AI--DYTKEN-IE----D---LPEKF 215 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~-~~----~---~~~~~ 215 (255)
+++++|+|++|++|...++.+.. .|++|+++++++++.+.+. +.+... .+ |..+.. .. + ..+++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVE-DGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999888887 4999999999887665442 223221 12 222211 11 1 12468
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|.+.|.
T Consensus 81 d~vi~~ag~ 89 (256)
T PRK08643 81 NVVVNNAGV 89 (256)
T ss_pred CEEEECCCC
Confidence 999999984
No 247
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.012 Score=48.45 Aligned_cols=75 Identities=25% Similarity=0.351 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-H---cCCC---EEEcCCCcc-ccc-------cCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-S---LGAD---LAIDYTKEN-IED-------LPE 213 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~---~g~~---~v~~~~~~~-~~~-------~~~ 213 (255)
-.+++++|+||+|++|...+..+.. .|++|+++++++++.+.+. + .+.. ...|..+.. ... ..+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAAR-AGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG 81 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999998888877 4999999999887665442 2 2322 122322211 111 124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999999984
No 248
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.013 Score=48.05 Aligned_cols=74 Identities=19% Similarity=0.359 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-H---cCCC-EEE--cCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-S---LGAD-LAI--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~---~g~~-~v~--~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+|++|++|...++.+... |.+|+.++++.++.+.+. + .+.. ..+ |..+.. ... ..+.
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQ-GAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999988874 999999999877665442 2 2322 222 222211 111 1236
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|+++.+.|.
T Consensus 86 id~li~~ag~ 95 (252)
T PRK07035 86 LDILVNNAAA 95 (252)
T ss_pred CCEEEECCCc
Confidence 8999999884
No 249
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.012 Score=49.92 Aligned_cols=41 Identities=24% Similarity=0.261 Sum_probs=34.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHH
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (255)
.+++++|+||+|++|..+++.+... |.+++++.++.++.+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~-G~~vi~~~r~~~~~~~ 55 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAK-GAHVVLAVRNLDKGKA 55 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence 5789999999999999988877774 8999999998776543
No 250
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.59 E-value=0.013 Score=48.61 Aligned_cols=74 Identities=19% Similarity=0.286 Sum_probs=45.8
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCCEEE--cCCCcc-ccc-------cCC
Q 025278 150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAI--DYTKEN-IED-------LPE 213 (255)
Q Consensus 150 ~g~~VlI~ga--~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~v~--~~~~~~-~~~-------~~~ 213 (255)
.+++++|+|| ++++|.+.++.+.. .|++|++..+++...+.++ +.+....+ |-.+.+ ..+ ..+
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~-~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACRE-QGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHH-CCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5789999996 56999998887776 4999998766543222232 23432222 222211 111 124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
++|++|+++|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 79999999984
No 251
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.59 E-value=0.0097 Score=53.48 Aligned_cols=74 Identities=27% Similarity=0.383 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh--hhHHH-HHHcCCCE-EEcCCCccc-cc-------cCCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST--AKLDL-LRSLGADL-AIDYTKENI-ED-------LPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~--~~~~~-~~~~g~~~-v~~~~~~~~-~~-------~~~~~d~ 217 (255)
++++++|+|++|++|...++.+.. .|+++++++++. ++++. .++++... ..|..+... .. ...++|+
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~-~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLAR-DGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHH-CCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 578999999999999999988887 499999988743 33332 34555432 234333221 11 1236899
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|++.|.
T Consensus 288 vi~~AG~ 294 (450)
T PRK08261 288 VVHNAGI 294 (450)
T ss_pred EEECCCc
Confidence 9999984
No 252
>PRK08589 short chain dehydrogenase; Validated
Probab=96.58 E-value=0.013 Score=48.94 Aligned_cols=73 Identities=22% Similarity=0.350 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHH-HHH---cCCC-EE--EcCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL-LRS---LGAD-LA--IDYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~-~~~---~g~~-~v--~~~~~~~-~~~-------~~~~ 214 (255)
.++++||+|+++++|...++.+.. .|++|++++++ ++.+. +++ .+.. .. .|..+.. ... ..+.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~-~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQ-EGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999998887777 49999999988 44332 332 2322 12 2322221 111 1246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999999984
No 253
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.57 E-value=0.014 Score=48.79 Aligned_cols=73 Identities=25% Similarity=0.471 Sum_probs=47.2
Q ss_pred CCCCEEEEEcCCchHHHHHH-HHHHHhcCCcEEEEecChhhH----HHHHHcCCC--EEEcCCC-ccc-------cccCC
Q 025278 149 SAGKSILVLGGAGGVGTMVI-QLAKHVFGASKVAATSSTAKL----DLLRSLGAD--LAIDYTK-ENI-------EDLPE 213 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~-~~a~~~~g~~vi~~~~~~~~~----~~~~~~g~~--~v~~~~~-~~~-------~~~~~ 213 (255)
-.|+.|||+||.+++|.+.+ ++|+. |++++..|.+.+-. +..++.|.. .+.|-.+ ++. .+..+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 46899999999999998755 55553 88898998766533 233444522 2233322 111 12245
Q ss_pred CccEEEECCC
Q 025278 214 KFDVVFDAVG 223 (255)
Q Consensus 214 ~~d~vid~~G 223 (255)
.+|+++|.+|
T Consensus 114 ~V~ILVNNAG 123 (300)
T KOG1201|consen 114 DVDILVNNAG 123 (300)
T ss_pred CceEEEeccc
Confidence 7999999998
No 254
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.56 E-value=0.0098 Score=50.08 Aligned_cols=74 Identities=24% Similarity=0.255 Sum_probs=47.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-Hc----CCCEEEcCCCccccccCCCccEEEECCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL----GADLAIDYTKENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~----g~~~v~~~~~~~~~~~~~~~d~vid~~G 223 (255)
..+++++|+| +|+.+.+++..+..++..+++++.|+.+|.+.+. ++ +...+......+.......+|+||||+.
T Consensus 125 ~~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred cCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCC
Confidence 3478999999 8999999888777753346778889988876653 33 2211111111111112346899999976
No 255
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.016 Score=47.37 Aligned_cols=74 Identities=26% Similarity=0.333 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-EE--cCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+|++|++|...+..+.. .|.+++++++++++.+.. ++.+... ++ |-.+.. ... ..++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAE-AGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999888877 499999999888766543 2233222 22 322211 111 1247
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (250)
T PRK12939 85 LDGLVNNAGI 94 (250)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 256
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.017 Score=47.69 Aligned_cols=73 Identities=18% Similarity=0.223 Sum_probs=49.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCC--C-EE--EcCCCcc-ccc-------cCCCcc
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA--D-LA--IDYTKEN-IED-------LPEKFD 216 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~--~-~v--~~~~~~~-~~~-------~~~~~d 216 (255)
+++++|+|++|++|...+..+.. .|.+|+++++++++++.+. ++.. + .. .|..+.+ ..+ ..+.+|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYAR-QGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 46899999999999998888877 4999999999888776543 2321 1 11 2222211 111 123589
Q ss_pred EEEECCCC
Q 025278 217 VVFDAVGK 224 (255)
Q Consensus 217 ~vid~~G~ 224 (255)
++|+++|.
T Consensus 81 ~lv~~ag~ 88 (257)
T PRK07024 81 VVIANAGI 88 (257)
T ss_pred EEEECCCc
Confidence 99999884
No 257
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.54 E-value=0.012 Score=48.50 Aligned_cols=74 Identities=27% Similarity=0.334 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH---cCCCE---EEcCCCcc-ccc-------cCCCc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---LGADL---AIDYTKEN-IED-------LPEKF 215 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~---~g~~~---v~~~~~~~-~~~-------~~~~~ 215 (255)
.+++++|+||+|++|...++.+.. .|.+|+++++++...+..++ .+.+. ..|..+.. ... ..+.+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAA-EGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999998888777 49999999887543333332 34332 12332211 111 12478
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|.++|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999983
No 258
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.54 E-value=0.015 Score=48.53 Aligned_cols=74 Identities=22% Similarity=0.372 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-H---HcCCC-EEE--cCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-R---SLGAD-LAI--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~---~~g~~-~v~--~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+|++|++|...+..+.. .|.+|+++++++++.+.+ + +.+.. ..+ |..+.. ... ..+.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELAR-AGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999998888877 499999999987665443 2 22322 122 222211 111 1247
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.++|.
T Consensus 88 id~li~~ag~ 97 (278)
T PRK08277 88 CDILINGAGG 97 (278)
T ss_pred CCEEEECCCC
Confidence 8999999883
No 259
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.54 E-value=0.015 Score=47.96 Aligned_cols=74 Identities=26% Similarity=0.306 Sum_probs=47.8
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCC--EEE--cCCCcc-ccc-------cCCCc
Q 025278 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAI--DYTKEN-IED-------LPEKF 215 (255)
Q Consensus 150 ~g~~VlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~v~--~~~~~~-~~~-------~~~~~ 215 (255)
.+++++|+||+ +++|.+.++.+.. .|++|++..++++..+.++++... ..+ |-.+.. ..+ ..+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~-~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKD-QGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHH-CCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999988 7999998888777 499999988875433444443211 122 222211 111 12468
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|++.|.
T Consensus 85 D~lv~nAg~ 93 (252)
T PRK06079 85 DGIVHAIAY 93 (252)
T ss_pred CEEEEcccc
Confidence 999999984
No 260
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.016 Score=47.59 Aligned_cols=74 Identities=30% Similarity=0.447 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCC-EEE--cCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD-LAI--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+|++|++|...+..+... |++|+++++++++.+.+ ++.+.. ..+ |..+.. ... ..+.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFARE-GAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999988877774 89999999988765433 333432 222 222211 111 1236
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 85 id~li~~ag~ 94 (253)
T PRK06172 85 LDYAFNNAGI 94 (253)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 261
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.017 Score=48.13 Aligned_cols=73 Identities=26% Similarity=0.333 Sum_probs=49.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH-cCCC-EEE--cCCCcc-ccc-------cCCCccEE
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAI--DYTKEN-IED-------LPEKFDVV 218 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~v~--~~~~~~-~~~-------~~~~~d~v 218 (255)
+++++|+||+|++|...+..+.. .|.+|++++++.++++.+.+ ++.. ..+ |..+.. ... ...++|++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALE-RGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 56899999999999998888776 48999999998887765543 3321 222 222211 111 12478999
Q ss_pred EECCCC
Q 025278 219 FDAVGK 224 (255)
Q Consensus 219 id~~G~ 224 (255)
|.++|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999984
No 262
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.52 E-value=0.011 Score=49.77 Aligned_cols=71 Identities=21% Similarity=0.227 Sum_probs=48.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHH-HHcC----CCEEEcCCCccccccCCCccEEEECC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLG----ADLAIDYTKENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~-~~~g----~~~v~~~~~~~~~~~~~~~d~vid~~ 222 (255)
..+++|+|+| +|+.|.+++..+..+ |+ ++++++++.+|.+.+ ++++ ...+... .+..+....+|+||+|+
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~-G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~~~~~~~~~aDiVInaT 200 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTL-GVERLTIFDVDPARAAALADELNARFPAARATAG--SDLAAALAAADGLVHAT 200 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--cchHhhhCCCCEEEECC
Confidence 3568999999 899999999888886 65 788889998887655 3332 1122211 11222235789999995
Q ss_pred C
Q 025278 223 G 223 (255)
Q Consensus 223 G 223 (255)
.
T Consensus 201 p 201 (284)
T PRK12549 201 P 201 (284)
T ss_pred c
Confidence 4
No 263
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.52 E-value=0.029 Score=46.91 Aligned_cols=71 Identities=18% Similarity=0.312 Sum_probs=48.6
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHc---CCCEEEcCCCccccccCCCccEEEECCC
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSL---GADLAIDYTKENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~---g~~~v~~~~~~~~~~~~~~~d~vid~~G 223 (255)
...+++++|+| +|++|.+++..+... |.+++++.++++|.+.+ +++ +........+ .....+|+||+|++
T Consensus 114 ~~~~k~vliiG-aGg~g~aia~~L~~~-g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~~~~DivInatp 187 (270)
T TIGR00507 114 LRPNQRVLIIG-AGGAARAVALPLLKA-DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE----LPLHRVDLIINATS 187 (270)
T ss_pred CccCCEEEEEc-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh----hcccCccEEEECCC
Confidence 34578999999 699999988887774 78888989988776544 333 2222222111 11246899999988
Q ss_pred C
Q 025278 224 K 224 (255)
Q Consensus 224 ~ 224 (255)
.
T Consensus 188 ~ 188 (270)
T TIGR00507 188 A 188 (270)
T ss_pred C
Confidence 4
No 264
>PRK08017 oxidoreductase; Provisional
Probab=96.52 E-value=0.0081 Score=49.35 Aligned_cols=72 Identities=22% Similarity=0.344 Sum_probs=52.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEE-EcCCCcc-c----cc----cCCCccEEEEC
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKEN-I----ED----LPEKFDVVFDA 221 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~-~----~~----~~~~~d~vid~ 221 (255)
++++|+|++|++|...++.+... |.+++++++++++.+.+++.+.+.+ .|..+.+ . .. ....+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRR-GYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999999999999999998874 8999999999998888777775443 2332221 0 11 12468999998
Q ss_pred CCC
Q 025278 222 VGK 224 (255)
Q Consensus 222 ~G~ 224 (255)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 873
No 265
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.52 E-value=0.016 Score=47.75 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=34.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (255)
+++++|+|++|++|...+..+.. .|++++.++++.++.+..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~-~g~~vi~~~r~~~~~~~~ 42 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAE-EGYRVAVADINSEKAANV 42 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHH
Confidence 56899999999999998888877 499999999887765443
No 266
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.51 E-value=0.011 Score=48.76 Aligned_cols=75 Identities=19% Similarity=0.234 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHc--CCCEE-EcCCC--ccccccC-CCccEEEECC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL--GADLA-IDYTK--ENIEDLP-EKFDVVFDAV 222 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~--g~~~v-~~~~~--~~~~~~~-~~~d~vid~~ 222 (255)
..+++|+|+||+|.+|...+..+.. .|.+|+++.+++++....... ++..+ .|..+ ..+.+.. .++|+||.++
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLA-KGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence 3467999999999999999888877 489999999988765433221 23222 23332 1222333 5899999998
Q ss_pred CC
Q 025278 223 GK 224 (255)
Q Consensus 223 G~ 224 (255)
|.
T Consensus 94 g~ 95 (251)
T PLN00141 94 GF 95 (251)
T ss_pred CC
Confidence 74
No 267
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.018 Score=47.07 Aligned_cols=73 Identities=21% Similarity=0.305 Sum_probs=48.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----c--CCC-EE--EcCCCcc-cc-------ccCC
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----L--GAD-LA--IDYTKEN-IE-------DLPE 213 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~--g~~-~v--~~~~~~~-~~-------~~~~ 213 (255)
+++++|+|++|++|...+..+... |.+++++++++++.+.+.+ . +.. ++ .|..+.. .. +..+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK-GRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999888777764 8999999998887665421 1 211 12 2332221 11 1124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
++|++|.+.|.
T Consensus 81 ~id~vi~~ag~ 91 (248)
T PRK08251 81 GLDRVIVNAGI 91 (248)
T ss_pred CCCEEEECCCc
Confidence 78999999883
No 268
>PLN02253 xanthoxin dehydrogenase
Probab=96.50 E-value=0.015 Score=48.51 Aligned_cols=74 Identities=27% Similarity=0.386 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCC--C-EE--EcCCCcc-ccc-------cCCCc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA--D-LA--IDYTKEN-IED-------LPEKF 215 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~--~-~v--~~~~~~~-~~~-------~~~~~ 215 (255)
.+++++|+|++|++|...++.+.. .|++|+++++++++.+.+ ++++. . .. .|-.+.. ..+ ..+++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~-~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHK-HGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999998887776 499999998877655433 33321 1 12 2222211 111 12468
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|++.|.
T Consensus 96 d~li~~Ag~ 104 (280)
T PLN02253 96 DIMVNNAGL 104 (280)
T ss_pred CEEEECCCc
Confidence 999999984
No 269
>PRK08264 short chain dehydrogenase; Validated
Probab=96.50 E-value=0.014 Score=47.42 Aligned_cols=71 Identities=23% Similarity=0.390 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHHcCCC-EEE--cCCCc-cccc---cCCCccEEEEC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD-LAI--DYTKE-NIED---LPEKFDVVFDA 221 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~-~v~--~~~~~-~~~~---~~~~~d~vid~ 221 (255)
.+++++|+||+|++|...++.+... |. +|++++++.++.+. .+.. .++ |..+. .+.+ ..+.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLAR-GAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 4678999999999999998888874 88 99999988776543 2221 122 22221 1111 12358999999
Q ss_pred CCC
Q 025278 222 VGK 224 (255)
Q Consensus 222 ~G~ 224 (255)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 986
No 270
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.50 E-value=0.018 Score=45.89 Aligned_cols=68 Identities=22% Similarity=0.219 Sum_probs=48.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCCCEEEcCCCccccccCCCccEEEECCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~d~vid~~G 223 (255)
-.|++++|+| .|.+|..+++.+... |++|++.++++++.+.++ .+|+. .++..+ +. ...+|+++-|+.
T Consensus 26 l~gk~v~I~G-~G~vG~~~A~~L~~~-G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~--l~--~~~~Dv~vp~A~ 94 (200)
T cd01075 26 LEGKTVAVQG-LGKVGYKLAEHLLEE-GAKLIVADINEEAVARAAELFGAT-VVAPEE--IY--SVDADVFAPCAL 94 (200)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHcCCE-EEcchh--hc--cccCCEEEeccc
Confidence 4678999999 899999999999985 999999999988877664 45654 333211 11 124677775544
No 271
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.50 E-value=0.019 Score=46.64 Aligned_cols=73 Identities=16% Similarity=0.240 Sum_probs=48.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhH-HHHHHcCCCEE-EcCCCcc-cc-------ccCCCccEEEE
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGADLA-IDYTKEN-IE-------DLPEKFDVVFD 220 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~-~~~~~~g~~~v-~~~~~~~-~~-------~~~~~~d~vid 220 (255)
+++++|+|+++++|...++.+.. .|++|+++++++++. +.+++.+...+ .|..+.. .. +..+++|++|+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLA-QGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 46899999999999998888777 499999998876543 33445554321 2222211 11 11246899999
Q ss_pred CCCC
Q 025278 221 AVGK 224 (255)
Q Consensus 221 ~~G~ 224 (255)
+.|.
T Consensus 81 ~ag~ 84 (236)
T PRK06483 81 NASD 84 (236)
T ss_pred CCcc
Confidence 9884
No 272
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.016 Score=47.81 Aligned_cols=73 Identities=29% Similarity=0.425 Sum_probs=50.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcC-CC-EE--EcCCCcc-ccc----c----CCCccE
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG-AD-LA--IDYTKEN-IED----L----PEKFDV 217 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g-~~-~v--~~~~~~~-~~~----~----~~~~d~ 217 (255)
++++|+||+|++|...++.+... |.+|++++++.++.+.+. .++ .. ++ .|-.+.+ ..+ . .+.+|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAE-GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 57999999999999998877774 999999999988876654 332 11 12 2333221 111 1 346899
Q ss_pred EEECCCCc
Q 025278 218 VFDAVGKM 225 (255)
Q Consensus 218 vid~~G~~ 225 (255)
+|.++|..
T Consensus 81 vi~~ag~~ 88 (260)
T PRK08267 81 LFNNAGIL 88 (260)
T ss_pred EEECCCCC
Confidence 99999843
No 273
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.017 Score=47.24 Aligned_cols=74 Identities=24% Similarity=0.386 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-Hc--CCC-EEE--cCCCcc-ccc-------cCCCc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL--GAD-LAI--DYTKEN-IED-------LPEKF 215 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~--g~~-~v~--~~~~~~-~~~-------~~~~~ 215 (255)
.+++++|+|++|++|...++.+.. .|++++++.++.++.+... ++ +.. ..+ |..+.. ..+ ..+++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAR-EGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHH-CCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 467999999999999998887777 4899999998877655432 22 322 222 222211 111 12478
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|.+.|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999999984
No 274
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.48 E-value=0.02 Score=47.17 Aligned_cols=74 Identities=22% Similarity=0.336 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCEE-E--cCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-I--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~v-~--~~~~~~-~~~-------~~~~ 214 (255)
.++++||+|++|.+|..++..+.. .|.+|+++++++++.+.+ ++.+.+.. + |..+.. ..+ ..+.
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELAR-AGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999998888877 499999999988665433 33443322 2 222211 111 1235
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.++|.
T Consensus 85 ~d~vi~~ag~ 94 (262)
T PRK13394 85 VDILVSNAGI 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999999984
No 275
>PRK06720 hypothetical protein; Provisional
Probab=96.48 E-value=0.027 Score=43.66 Aligned_cols=74 Identities=24% Similarity=0.373 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-H---HcCCCE-EEcCCCcccc---c-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-R---SLGADL-AIDYTKENIE---D-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~---~~g~~~-v~~~~~~~~~---~-------~~~~ 214 (255)
.++.++|+||++++|...+..+.. .|.++++++++.++.+.+ + +.+... .+..+-.+.. + ..+.
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAK-QGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999998887776 489999999877655432 2 234332 2322222211 1 1246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|+++|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 8999999884
No 276
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.016 Score=48.46 Aligned_cols=74 Identities=22% Similarity=0.249 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCC--C-EEE--cCCCcc-cc---c---cCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGA--D-LAI--DYTKEN-IE---D---LPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~--~-~v~--~~~~~~-~~---~---~~~ 213 (255)
.+++++|+||+|++|...+..+.. .|++|+++++++++.+... +.+. . ..+ |..+.. .. + ..+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAK-KGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcC
Confidence 357899999999999999988877 4999999998887665442 2221 1 122 332221 11 1 124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
++|++|.+.|.
T Consensus 81 ~id~vv~~ag~ 91 (280)
T PRK06914 81 RIDLLVNNAGY 91 (280)
T ss_pred CeeEEEECCcc
Confidence 68999999884
No 277
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.015 Score=48.42 Aligned_cols=72 Identities=25% Similarity=0.347 Sum_probs=48.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE----EEcCCCccc-c-------ccCCCc
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL----AIDYTKENI-E-------DLPEKF 215 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~----v~~~~~~~~-~-------~~~~~~ 215 (255)
++++|+||+|++|..+++.+.. .|++|+++++++++++.+ +..+... ..|..+... . +..+++
T Consensus 1 k~vlItGas~giG~~la~~la~-~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAA-QGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 3689999999999999888877 489999999887765443 2234321 133332211 0 112468
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|+++|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999984
No 278
>PRK14967 putative methyltransferase; Provisional
Probab=96.47 E-value=0.045 Score=44.32 Aligned_cols=76 Identities=22% Similarity=0.197 Sum_probs=49.8
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCCC-EEEcCCCccccccCCCccE
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDV 217 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~d~ 217 (255)
+....++++++||-.| +|. |..+..+++. +..++++++.+++.++.+++ .+.. .+++.+-.+. ...+.+|+
T Consensus 29 l~~~~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD~ 104 (223)
T PRK14967 29 LAAEGLGPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA-VEFRPFDV 104 (223)
T ss_pred HHhcccCCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh-ccCCCeeE
Confidence 4455678889999999 666 8888888875 34589999999988876643 3432 2233221111 11347999
Q ss_pred EEECC
Q 025278 218 VFDAV 222 (255)
Q Consensus 218 vid~~ 222 (255)
|+-..
T Consensus 105 Vi~np 109 (223)
T PRK14967 105 VVSNP 109 (223)
T ss_pred EEECC
Confidence 99753
No 279
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.014 Score=48.30 Aligned_cols=73 Identities=22% Similarity=0.380 Sum_probs=48.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-EE--cCCCcc-ccc-------cCCCc
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTKEN-IED-------LPEKF 215 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~-~~~-------~~~~~ 215 (255)
+++++|+|++|++|..+++.+.. .|.+|+++++++++.+.+ +..+... ++ |..+.. ... ...++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~-~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLAR-AGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 35799999999999999988877 489999999987665433 2234322 12 222211 111 12368
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|.++|.
T Consensus 80 d~vi~~ag~ 88 (263)
T PRK06181 80 DILVNNAGI 88 (263)
T ss_pred CEEEECCCc
Confidence 999999884
No 280
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.46 E-value=0.011 Score=49.51 Aligned_cols=77 Identities=31% Similarity=0.470 Sum_probs=52.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCC------EEEcCCCcc-ccc-------
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD------LAIDYTKEN-IED------- 210 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~------~v~~~~~~~-~~~------- 210 (255)
-.|+.++|+|++.++|.+.+..+... |++|++..+++++.+..+ ..+.. .+.|..++. ..+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~-Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKA-GAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 46889999999999998877777664 999999999998876543 22221 122322221 111
Q ss_pred c-CCCccEEEECCCCcc
Q 025278 211 L-PEKFDVVFDAVGKMC 226 (255)
Q Consensus 211 ~-~~~~d~vid~~G~~~ 226 (255)
. .+++|+.+++.|...
T Consensus 85 ~~~GkidiLvnnag~~~ 101 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGALG 101 (270)
T ss_pred HhCCCCCEEEEcCCcCC
Confidence 1 357999999999443
No 281
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.46 E-value=0.017 Score=47.68 Aligned_cols=74 Identities=30% Similarity=0.462 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCC-EE--EcCCCcc-cc-------ccCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LA--IDYTKEN-IE-------DLPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~v--~~~~~~~-~~-------~~~~~ 214 (255)
.+++++|+|++|++|...++.+.. .|++|++++++.++++.+. +.+.. .. .|..+.. .. +....
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGE-AGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999888887 4999999999887765543 22322 12 2322211 11 11246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.++|.
T Consensus 90 id~vi~~ag~ 99 (259)
T PRK08213 90 VDILVNNAGA 99 (259)
T ss_pred CCEEEECCCC
Confidence 8999999884
No 282
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.46 E-value=0.018 Score=48.18 Aligned_cols=75 Identities=25% Similarity=0.246 Sum_probs=47.5
Q ss_pred CCCCEEEEEcCC--chHHHHHHHHHHHhcCCcEEEEecCh---hhHHHH-HHcCCCEEEcCCCccccc----------cC
Q 025278 149 SAGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSST---AKLDLL-RSLGADLAIDYTKENIED----------LP 212 (255)
Q Consensus 149 ~~g~~VlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~---~~~~~~-~~~g~~~v~~~~~~~~~~----------~~ 212 (255)
-.+++++|+|++ +++|.+.+..+.. .|++|+++.+++ ++++.+ ++++....+..+-.+..+ ..
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~-~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRA-AGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHH-CCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 357899999986 7999998887777 499998877653 333333 344532222222111111 12
Q ss_pred CCccEEEECCCC
Q 025278 213 EKFDVVFDAVGK 224 (255)
Q Consensus 213 ~~~d~vid~~G~ 224 (255)
+.+|++|++.|.
T Consensus 87 g~iD~lv~nAG~ 98 (272)
T PRK08159 87 GKLDFVVHAIGF 98 (272)
T ss_pred CCCcEEEECCcc
Confidence 468999999984
No 283
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.45 E-value=0.019 Score=47.19 Aligned_cols=74 Identities=26% Similarity=0.413 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HH---cCCCE-EE--cCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RS---LGADL-AI--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~---~g~~~-v~--~~~~~~-~~~-------~~~~ 214 (255)
.++++||+||+|++|...++.+.. .|++++++++++++.+.+ ++ .+... .+ |-.+.+ ..+ ..+.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~-~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAE-YGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-cCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999998888877 499999999987765543 22 23221 22 222211 111 1246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 87 id~vi~~ag~ 96 (254)
T PRK08085 87 IDVLINNAGI 96 (254)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 284
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.02 Score=47.76 Aligned_cols=72 Identities=22% Similarity=0.329 Sum_probs=49.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH-cCCC-EE--EcCCCcc-ccc-------cCCCccEEE
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LA--IDYTKEN-IED-------LPEKFDVVF 219 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~v--~~~~~~~-~~~-------~~~~~d~vi 219 (255)
+++||+||+|++|...++.+.. .|.+|+++.+++++++.+++ .+.. .+ .|..+.. ..+ ...++|++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLA-RGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5799999999999998887777 48999999999887776643 2322 11 2222221 111 124689999
Q ss_pred ECCCC
Q 025278 220 DAVGK 224 (255)
Q Consensus 220 d~~G~ 224 (255)
.++|.
T Consensus 82 ~~ag~ 86 (276)
T PRK06482 82 SNAGY 86 (276)
T ss_pred ECCCC
Confidence 99984
No 285
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.014 Score=48.01 Aligned_cols=75 Identities=27% Similarity=0.390 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecChhhHHH----HHHcCCCE---EEcCCCcc-cccc-------C
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDL----LRSLGADL---AIDYTKEN-IEDL-------P 212 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~----~~~~g~~~---v~~~~~~~-~~~~-------~ 212 (255)
..+++++|+|++|++|...++.+.. .|++ |+++++++++.+. +++.+... ..|..+.+ ..+. .
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~-~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAE-RGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHH-CCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3568999999999999999888887 4888 8888887765542 23334332 12333221 1111 1
Q ss_pred CCccEEEECCCC
Q 025278 213 EKFDVVFDAVGK 224 (255)
Q Consensus 213 ~~~d~vid~~G~ 224 (255)
+++|++|++.|.
T Consensus 83 g~id~li~~ag~ 94 (260)
T PRK06198 83 GRLDALVNAAGL 94 (260)
T ss_pred CCCCEEEECCCc
Confidence 368999999984
No 286
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.44 E-value=0.019 Score=45.25 Aligned_cols=95 Identities=23% Similarity=0.235 Sum_probs=59.9
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCCE--EEcCCCccccccCCCccEEEEC
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFDVVFDA 221 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~--v~~~~~~~~~~~~~~~d~vid~ 221 (255)
++++.+|+-.| +| .|..+..+++...+.+++.++.+++..+.++ +.+.+. ++..+..+... .+.+|+|+-.
T Consensus 43 l~~g~~VLDiG-cG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~ 119 (187)
T PRK00107 43 LPGGERVLDVG-SG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSR 119 (187)
T ss_pred cCCCCeEEEEc-CC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEc
Confidence 44588999998 44 3777777776556789999999998776664 345432 22222222222 3479999954
Q ss_pred CCC--ccceeeeeeccccCCceEEEEe
Q 025278 222 VGK--MCISIVYQKCDKFQEKSLINFG 246 (255)
Q Consensus 222 ~G~--~~~~~~~~~~~~~~~G~~v~~G 246 (255)
.-. ......+.+.++ ++|+++.+=
T Consensus 120 ~~~~~~~~l~~~~~~Lk-pGG~lv~~~ 145 (187)
T PRK00107 120 AVASLSDLVELCLPLLK-PGGRFLALK 145 (187)
T ss_pred cccCHHHHHHHHHHhcC-CCeEEEEEe
Confidence 321 233334466777 899988773
No 287
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.013 Score=48.76 Aligned_cols=41 Identities=27% Similarity=0.350 Sum_probs=34.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHH
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (255)
.+++++|+|++|++|...++.+.. .|.+|+++.+++++.+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~-~G~~V~~~~r~~~~~~~ 46 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVA-AGAAVMIVGRNPDKLAA 46 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEeCCHHHHHH
Confidence 468999999999999999998887 49999999988776543
No 288
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.43 E-value=0.018 Score=47.45 Aligned_cols=74 Identities=20% Similarity=0.326 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhh--HHHHHHcCCCE-E--EcCCCcc-ccc-------cCCCcc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLLRSLGADL-A--IDYTKEN-IED-------LPEKFD 216 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~--~~~~~~~g~~~-v--~~~~~~~-~~~-------~~~~~d 216 (255)
.+++++|+||++++|.+.++.+.. .|++|+++.+++.. .+..++.+.+. . .|-.+.. ..+ ..+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~-~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAK-AGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999998888877 49999988775422 22334455332 1 2332221 111 124689
Q ss_pred EEEECCCC
Q 025278 217 VVFDAVGK 224 (255)
Q Consensus 217 ~vid~~G~ 224 (255)
+++++.|.
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99999883
No 289
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.42 E-value=0.027 Score=43.59 Aligned_cols=54 Identities=28% Similarity=0.324 Sum_probs=36.7
Q ss_pred ccchhHHHHHHHHHh-cccCCCCEEEEEcCCch-HHHHHHHHHHHhcCCcEEEEecCh
Q 025278 131 SLPLATETAYEGLER-SAFSAGKSILVLGGAGG-VGTMVIQLAKHVFGASKVAATSST 186 (255)
Q Consensus 131 ~l~~~~~ta~~~l~~-~~~~~g~~VlI~ga~g~-~G~~a~~~a~~~~g~~vi~~~~~~ 186 (255)
..|+....+...++. ..--.+++|+|+| +|. +|..++..++.. |+++.++.++.
T Consensus 23 ~~p~~~~a~v~l~~~~~~~l~gk~vlViG-~G~~~G~~~a~~L~~~-g~~V~v~~r~~ 78 (168)
T cd01080 23 FIPCTPAGILELLKRYGIDLAGKKVVVVG-RSNIVGKPLAALLLNR-NATVTVCHSKT 78 (168)
T ss_pred ccCChHHHHHHHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHhhC-CCEEEEEECCc
Confidence 345444344444433 2346789999999 676 599888888874 88888888764
No 290
>PRK06484 short chain dehydrogenase; Validated
Probab=96.41 E-value=0.018 Score=52.63 Aligned_cols=74 Identities=23% Similarity=0.354 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCCCE-E--EcCCCcc-ccc-------cCCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADL-A--IDYTKEN-IED-------LPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~-v--~~~~~~~-~~~-------~~~~~d~ 217 (255)
.|++++|+||++++|...++.+.. .|++|+++++++++++.+. +++... . .|..+.. ... ..+.+|+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAA-AGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 578999999999999998887777 4899999999888877664 455332 1 2332221 111 1246899
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|+++|.
T Consensus 347 li~nAg~ 353 (520)
T PRK06484 347 LVNNAGI 353 (520)
T ss_pred EEECCCC
Confidence 9999984
No 291
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.0095 Score=49.48 Aligned_cols=72 Identities=21% Similarity=0.390 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCE-EEcCCCcc-ccc-------cCCCccEEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTKEN-IED-------LPEKFDVVFD 220 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~-~~~-------~~~~~d~vid 220 (255)
.+++++|+||+|++|...++.+.. .|.+|++++++.++.+... +... ..|..+.. ..+ ..+.+|++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~-~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLAR-AGYRVFGTSRNPARAAPIP--GVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHH-CCCEEEEEeCChhhccccC--CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 356899999999999998888777 4999999999876554221 2221 12332221 111 1246899999
Q ss_pred CCCC
Q 025278 221 AVGK 224 (255)
Q Consensus 221 ~~G~ 224 (255)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9984
No 292
>PRK09242 tropinone reductase; Provisional
Probab=96.40 E-value=0.023 Score=46.81 Aligned_cols=74 Identities=19% Similarity=0.402 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-Hc-----CCCE-EE--cCCCcc--------ccccC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL-----GADL-AI--DYTKEN--------IEDLP 212 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~-----g~~~-v~--~~~~~~--------~~~~~ 212 (255)
.+++++|+|++|++|...+..+.. .|.+++++++++++.+.+. ++ +.+. .+ |..+.+ ..+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~-~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLG-LGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999998888887 4999999999887765442 22 2221 12 222211 11113
Q ss_pred CCccEEEECCCC
Q 025278 213 EKFDVVFDAVGK 224 (255)
Q Consensus 213 ~~~d~vid~~G~ 224 (255)
+++|++|.+.|.
T Consensus 87 g~id~li~~ag~ 98 (257)
T PRK09242 87 DGLHILVNNAGG 98 (257)
T ss_pred CCCCEEEECCCC
Confidence 478999999985
No 293
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.023 Score=46.76 Aligned_cols=74 Identities=20% Similarity=0.265 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh-hHHH----HHHcCCCE-EE--cCCCcc-ccc-------cCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDL----LRSLGADL-AI--DYTKEN-IED-------LPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~----~~~~g~~~-v~--~~~~~~-~~~-------~~~ 213 (255)
.+++++|+|+++++|...++.+.. .|+++++++++++ +.+. +++.+... .+ |-.+.+ ..+ ..+
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQ-AGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999988887 4999999987653 2222 23334221 22 222211 111 124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|++.|.
T Consensus 86 ~id~li~~ag~ 96 (254)
T PRK06114 86 ALTLAVNAAGI 96 (254)
T ss_pred CCCEEEECCCC
Confidence 68999999984
No 294
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.37 E-value=0.023 Score=46.38 Aligned_cols=74 Identities=19% Similarity=0.269 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCC-EEEcCCCcccc---c-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAIDYTKENIE---D-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~---~-------~~~~ 214 (255)
+++++||+||+|.+|...+..+.. .|.+|+.++++.++.+.+. +.+.. ..+..+-.+.. + ...+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAE-EGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468899999999999999888877 4899999998877655442 22322 22222211111 1 1236
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 81 ~d~vi~~ag~ 90 (250)
T TIGR03206 81 VDVLVNNAGW 90 (250)
T ss_pred CCEEEECCCC
Confidence 8999999983
No 295
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.36 E-value=0.012 Score=44.99 Aligned_cols=75 Identities=17% Similarity=0.304 Sum_probs=45.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecC--hhhHHHH----HHcCCCE-EEcCCCccccc----------cCCC
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS--TAKLDLL----RSLGADL-AIDYTKENIED----------LPEK 214 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~--~~~~~~~----~~~g~~~-v~~~~~~~~~~----------~~~~ 214 (255)
++++|+||++++|...++.+...++.+++.+.++ .++.+.+ ++.+... ++..+-.+..+ ....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999998777776434466677777 4444433 3345322 22221111111 1247
Q ss_pred ccEEEECCCCcc
Q 025278 215 FDVVFDAVGKMC 226 (255)
Q Consensus 215 ~d~vid~~G~~~ 226 (255)
+|++|.+.|...
T Consensus 81 ld~li~~ag~~~ 92 (167)
T PF00106_consen 81 LDILINNAGIFS 92 (167)
T ss_dssp ESEEEEECSCTT
T ss_pred cccccccccccc
Confidence 999999999443
No 296
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.34 E-value=0.026 Score=47.51 Aligned_cols=148 Identities=20% Similarity=0.227 Sum_probs=84.8
Q ss_pred CCCCCEEEeccCccccCCCCCCcceeeEEeeeCCceEeCCCCCCHHhhhccchhHHHHHHHHH--hcccCCCCEEEEEcC
Q 025278 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE--RSAFSAGKSILVLGG 159 (255)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~g~~VlI~ga 159 (255)
.+.|+|.+..+ +|.+|..-....++++.+++.+- ......|.+ +++ ....++|++|+=.|
T Consensus 109 ~rig~~f~I~P------------sw~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~l-cL~~Le~~~~~g~~vlDvG- 170 (300)
T COG2264 109 VRIGERFVIVP------------SWREYPEPSDELNIELDPGLAFG----TGTHPTTSL-CLEALEKLLKKGKTVLDVG- 170 (300)
T ss_pred EEeeeeEEECC------------CCccCCCCCCceEEEEccccccC----CCCChhHHH-HHHHHHHhhcCCCEEEEec-
Confidence 66788887765 35544322245667777776442 222222222 332 23356999999998
Q ss_pred CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCCCEEEcCCCccccc--cCCCccEEEECCCCccce---ee
Q 025278 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIED--LPEKFDVVFDAVGKMCIS---IV 230 (255)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~--~~~~~d~vid~~G~~~~~---~~ 230 (255)
+| .|.+++..++. +..+++++|.++-..+.+++ .+.+........+... ..+.+|+|+-..=..-.. ..
T Consensus 171 cG-SGILaIAa~kL-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~ 248 (300)
T COG2264 171 CG-SGILAIAAAKL-GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPD 248 (300)
T ss_pred CC-hhHHHHHHHHc-CCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHH
Confidence 54 49999988886 56779999998876666543 3333111111111111 124799999664221111 12
Q ss_pred eeeccccCCceEEEEeeccC
Q 025278 231 YQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 231 ~~~~~~~~~G~~v~~G~~~~ 250 (255)
....++ ++|++++-|....
T Consensus 249 ~~~~lk-pgg~lIlSGIl~~ 267 (300)
T COG2264 249 IKRLLK-PGGRLILSGILED 267 (300)
T ss_pred HHHHcC-CCceEEEEeehHh
Confidence 244455 7899999997654
No 297
>PRK06484 short chain dehydrogenase; Validated
Probab=96.34 E-value=0.017 Score=52.86 Aligned_cols=74 Identities=30% Similarity=0.440 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCE---EEcCCCcc-ccc-------cCCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL---AIDYTKEN-IED-------LPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~---v~~~~~~~-~~~-------~~~~~d~ 217 (255)
.+++++|+|+++++|...++.+... |++|++++++.++++.+ ++++... ..|..+.. ... ..+++|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARA-GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999999999999988888774 99999999988887655 4565432 23332221 111 1246999
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|++.|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999885
No 298
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.33 E-value=0.026 Score=46.49 Aligned_cols=74 Identities=28% Similarity=0.425 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCCC-EEE--cCCCcc-ccc-------cCCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAI--DYTKEN-IED-------LPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~v~--~~~~~~-~~~-------~~~~~d~ 217 (255)
.+++++|+|++|++|...++.+.. .|.+|+.++++.++.+.+. +++.. ..+ |-.+.. ... ..+.+|+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLA-EGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-cCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467899999999999999888887 4999999999888766543 34322 112 221111 111 1246899
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|.+.|.
T Consensus 84 li~~ag~ 90 (257)
T PRK07067 84 LFNNAAL 90 (257)
T ss_pred EEECCCc
Confidence 9999884
No 299
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.022 Score=45.88 Aligned_cols=73 Identities=26% Similarity=0.447 Sum_probs=51.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCE-EEcCCCcc-ccc----c-CCCccEEEECCCC
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTKEN-IED----L-PEKFDVVFDAVGK 224 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~-~~~----~-~~~~d~vid~~G~ 224 (255)
++++|+|++|++|...++.+.. .|++++.+++++++.+.++..+... ..|-.+.+ ... . ...+|++|.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRA-DGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHh-CCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 4799999999999998887766 4999999999888777766655432 22322221 111 1 1358999999885
Q ss_pred c
Q 025278 225 M 225 (255)
Q Consensus 225 ~ 225 (255)
.
T Consensus 81 ~ 81 (222)
T PRK06953 81 Y 81 (222)
T ss_pred c
Confidence 3
No 300
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.02 Score=46.24 Aligned_cols=70 Identities=20% Similarity=0.385 Sum_probs=48.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCEE-EcCCCcc-ccc----cCCCccEEEECCC
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-IDYTKEN-IED----LPEKFDVVFDAVG 223 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~v-~~~~~~~-~~~----~~~~~d~vid~~G 223 (255)
+++|+||+|++|...++.+.. .|.+++.+++++++++.+ ++++...+ .|..+.. ..+ ..+.+|++|++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRN-DGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 589999999999998888877 499999999998887654 44554322 2332221 111 1236899999876
No 301
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.32 E-value=0.023 Score=53.88 Aligned_cols=74 Identities=28% Similarity=0.406 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-H----cCCC--EE--EcCCCcc-ccc-------cC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-S----LGAD--LA--IDYTKEN-IED-------LP 212 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~----~g~~--~v--~~~~~~~-~~~-------~~ 212 (255)
.+++++|+|++|++|...++.+.. .|++|++++++.++.+.+. + .+.. .. .|-.+.. +.+ ..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~-~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAA-EGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 478999999999999998888877 4999999999887765442 2 2321 11 2222211 111 12
Q ss_pred CCccEEEECCCC
Q 025278 213 EKFDVVFDAVGK 224 (255)
Q Consensus 213 ~~~d~vid~~G~ 224 (255)
+++|++|+++|.
T Consensus 492 g~iDilV~nAG~ 503 (676)
T TIGR02632 492 GGVDIVVNNAGI 503 (676)
T ss_pred CCCcEEEECCCC
Confidence 479999999984
No 302
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.027 Score=46.52 Aligned_cols=74 Identities=20% Similarity=0.323 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH---cCCCE-E--EcCCCcc-ccc-------cCCCc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---LGADL-A--IDYTKEN-IED-------LPEKF 215 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~-~~~-------~~~~~ 215 (255)
.+++++|+|++|++|...+..+.. .|.+|++++++++..+.+++ .+... . .|..+.. ... ..+.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFAR-HGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999998888887 49999999887754433322 23221 2 2222211 111 12468
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999999983
No 303
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.29 E-value=0.0066 Score=49.14 Aligned_cols=92 Identities=28% Similarity=0.349 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCC--EEEcCCCcccccc---CCCccEEEEC--
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTKENIEDL---PEKFDVVFDA-- 221 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~---~~~~d~vid~-- 221 (255)
-+|.+||=.| +|+ |+++..+|+. |++|.++|.+++..+.++..... .-+||.....++. .+.||+|+..
T Consensus 58 l~g~~vLDvG-CGg-G~Lse~mAr~--Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~~~~~FDvV~cmEV 133 (243)
T COG2227 58 LPGLRVLDVG-CGG-GILSEPLARL--GASVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLASAGGQFDVVTCMEV 133 (243)
T ss_pred CCCCeEEEec-CCc-cHhhHHHHHC--CCeeEEecCChHHHHHHHHhhhhccccccchhhhHHHHHhcCCCccEEEEhhH
Confidence 4788999888 555 7999999985 89999999999999888642211 1256665544443 3579999854
Q ss_pred ---CCCcc-ceeeeeeccccCCceEEEE
Q 025278 222 ---VGKMC-ISIVYQKCDKFQEKSLINF 245 (255)
Q Consensus 222 ---~G~~~-~~~~~~~~~~~~~G~~v~~ 245 (255)
+-.+. ....|.++++ ++|.+.+-
T Consensus 134 lEHv~dp~~~~~~c~~lvk-P~G~lf~S 160 (243)
T COG2227 134 LEHVPDPESFLRACAKLVK-PGGILFLS 160 (243)
T ss_pred HHccCCHHHHHHHHHHHcC-CCcEEEEe
Confidence 44443 3344577787 88877653
No 304
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.021 Score=46.88 Aligned_cols=38 Identities=26% Similarity=0.464 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhh
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (255)
.+++++|+||+|++|...++.+.. .|.+|+++++++++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~-~g~~v~~~~r~~~~ 42 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLA-AGATVVVCGRRAPE 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCChhh
Confidence 578999999999999998888877 49999999988765
No 305
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.29 E-value=0.02 Score=49.32 Aligned_cols=96 Identities=18% Similarity=0.216 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHHH-HcCCCEEEcCCCccccccCCCccEEEECCCCcc
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~ 226 (255)
-.+++|+|+||+|.+|..+++.+....+ .+++.+.++.+++..+. +++...+. ++.+...+.|+|+-+++...
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-----~l~~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-----SLEEALPEADIVVWVASMPK 227 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-----hHHHHHccCCEEEECCcCCc
Confidence 3678999999889999998888864234 57788888888776653 44321111 23334457899999998755
Q ss_pred ceeeeeeccccCCceEEEEeeccC
Q 025278 227 ISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 227 ~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
....-...++ +.-.++-++.++.
T Consensus 228 ~~~I~~~~l~-~~~~viDiAvPRD 250 (340)
T PRK14982 228 GVEIDPETLK-KPCLMIDGGYPKN 250 (340)
T ss_pred CCcCCHHHhC-CCeEEEEecCCCC
Confidence 4322223333 3345555666554
No 306
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.29 E-value=0.028 Score=46.05 Aligned_cols=72 Identities=25% Similarity=0.387 Sum_probs=49.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCCCE-EE--cCCCcc-ccc-------cCCCccEEE
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADL-AI--DYTKEN-IED-------LPEKFDVVF 219 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~-v~--~~~~~~-~~~-------~~~~~d~vi 219 (255)
++++|+|++|++|...+..+.. .|.+|+++++++++++.+. .++... .+ |-.+.. ..+ ..+++|++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQ-QGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3689999999999999888887 4999999999988776654 344332 12 222211 111 124799999
Q ss_pred ECCCC
Q 025278 220 DAVGK 224 (255)
Q Consensus 220 d~~G~ 224 (255)
.++|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 99884
No 307
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.024 Score=48.28 Aligned_cols=35 Identities=29% Similarity=0.304 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (255)
.+++++|+||++++|.+.++.+.. .|++|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~-~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGA-AGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEecc
Confidence 478999999999999998888877 49999998886
No 308
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.27 E-value=0.0041 Score=54.79 Aligned_cols=89 Identities=25% Similarity=0.363 Sum_probs=54.7
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHHH--cCCC---EEEcCCCcc-ccccCCCccEEEECCCCcc
Q 025278 154 ILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS--LGAD---LAIDYTKEN-IEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 154 VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~--~g~~---~v~~~~~~~-~~~~~~~~d~vid~~G~~~ 226 (255)
|+|+|+ |.+|..+++.+...... ++++.+++.++.+.+.+ .+.. ..+|..+.+ ..+..++.|+||+|+|...
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 789996 99999999998875444 78899999999877653 2221 223433322 3344568899999999765
Q ss_pred ceeeeeeccccCCceEEE
Q 025278 227 ISIVYQKCDKFQEKSLIN 244 (255)
Q Consensus 227 ~~~~~~~~~~~~~G~~v~ 244 (255)
....+..+++ .+-.++.
T Consensus 80 ~~~v~~~~i~-~g~~yvD 96 (386)
T PF03435_consen 80 GEPVARACIE-AGVHYVD 96 (386)
T ss_dssp HHHHHHHHHH-HT-EEEE
T ss_pred hHHHHHHHHH-hCCCeec
Confidence 4444444443 2334444
No 309
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.029 Score=46.14 Aligned_cols=73 Identities=23% Similarity=0.339 Sum_probs=48.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCC--CEEEcCCCcccccc----------CCCccE
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA--DLAIDYTKENIEDL----------PEKFDV 217 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~--~~v~~~~~~~~~~~----------~~~~d~ 217 (255)
+++++|+|++|++|...+..+.. .|.++++++++.++.+.+. ++.. -..+..+-.+..+. .+++|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLA-AGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999998888777 4899999999887765543 3321 11222221111111 136899
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (257)
T PRK07074 81 LVANAGA 87 (257)
T ss_pred EEECCCC
Confidence 9999984
No 310
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=96.25 E-value=0.0048 Score=51.68 Aligned_cols=67 Identities=22% Similarity=0.213 Sum_probs=46.0
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCC
Q 025278 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 154 VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~ 224 (255)
|||+||+|-+|...++.+.. .|.+|+++++++++.......+ +.+.......+...++|+||.+++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTK-DGHEVTILTRSPPAGANTKWEG---YKPWAPLAESEALEGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHH-cCCEEEEEeCCCCCCCccccee---eecccccchhhhcCCCCEEEECCCC
Confidence 68999999999999988877 4899999999876654322122 1111112222334589999999984
No 311
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.25 E-value=0.03 Score=45.95 Aligned_cols=74 Identities=26% Similarity=0.323 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCCE-EE--cCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AI--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+|++|.+|...++.+.. .|.+|+++++++++.+.+. +.+... .+ |..+.. ..+ ..++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAK-EGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999998888877 4999999999887765442 223221 22 222211 111 1246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.++|.
T Consensus 82 ~d~vi~~a~~ 91 (258)
T PRK12429 82 VDILVNNAGI 91 (258)
T ss_pred CCEEEECCCC
Confidence 8999999884
No 312
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.23 E-value=0.0051 Score=43.50 Aligned_cols=87 Identities=22% Similarity=0.249 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCcccee
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMCISI 229 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~~~ 229 (255)
.|++|||.| .|.+|..-++.+... |++++++.... +..+ +.-.... ..+.+...++|+||-+++.+....
T Consensus 6 ~~~~vlVvG-gG~va~~k~~~Ll~~-gA~v~vis~~~---~~~~--~~i~~~~---~~~~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVG-GGPVAARKARLLLEA-GAKVTVISPEI---EFSE--GLIQLIR---REFEEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEE-ESHHHHHHHHHHCCC-TBEEEEEESSE---HHHH--TSCEEEE---SS-GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCch---hhhh--hHHHHHh---hhHHHHHhhheEEEecCCCHHHHH
Confidence 578999999 799999988888884 89999998875 2222 2111221 223344678999999999877666
Q ss_pred eeeeccccCCceEEEEee
Q 025278 230 VYQKCDKFQEKSLINFGL 247 (255)
Q Consensus 230 ~~~~~~~~~~G~~v~~G~ 247 (255)
...+..+ ..|.++.+.-
T Consensus 76 ~i~~~a~-~~~i~vn~~D 92 (103)
T PF13241_consen 76 AIYADAR-ARGILVNVVD 92 (103)
T ss_dssp HHHHHHH-HTTSEEEETT
T ss_pred HHHHHHh-hCCEEEEECC
Confidence 5555555 4577776543
No 313
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.22 E-value=0.03 Score=45.38 Aligned_cols=74 Identities=24% Similarity=0.375 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCEE---EcCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA---IDYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~v---~~~~~~~-~~~-------~~~~ 214 (255)
++++++|+|++|++|...+..+.. .|.+|+++.+++++.+.. ++.+.... .|..+.. ..+ ....
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAA-DGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 457899999999999999988877 499999999988775543 33343322 2322221 111 1235
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|.+|.++|.
T Consensus 83 id~vi~~ag~ 92 (246)
T PRK05653 83 LDILVNNAGI 92 (246)
T ss_pred CCEEEECCCc
Confidence 7999999984
No 314
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.20 E-value=0.032 Score=45.87 Aligned_cols=74 Identities=24% Similarity=0.408 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCC-EE--EcCCCcc-cc-------ccCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD-LA--IDYTKEN-IE-------DLPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~-~v--~~~~~~~-~~-------~~~~~ 214 (255)
.+++++|+|+++++|...+..+.. .|.++++++++.++.+.+ ++.+.+ .. .|..+.. .. +....
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~-~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFAT-AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999998888777 499999998887765543 223322 12 2322221 11 11246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 89 ~d~li~~ag~ 98 (255)
T PRK06113 89 VDILVNNAGG 98 (255)
T ss_pred CCEEEECCCC
Confidence 8999999884
No 315
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.19 E-value=0.033 Score=46.31 Aligned_cols=36 Identities=28% Similarity=0.285 Sum_probs=29.1
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHhcCCcEEEEecCh
Q 025278 150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSST 186 (255)
Q Consensus 150 ~g~~VlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (255)
.+++++|+||++ ++|.+.++.+.. .|++|++..+++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~-~G~~vil~~r~~ 42 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHR-EGAELAFTYQND 42 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHH-CCCEEEEEecch
Confidence 578999999875 899987777776 489998887763
No 316
>PRK06398 aldose dehydrogenase; Validated
Probab=96.19 E-value=0.017 Score=47.68 Aligned_cols=69 Identities=19% Similarity=0.383 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCC-EEEcCCCcc-ccc-------cCCCccEEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKEN-IED-------LPEKFDVVFD 220 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~-~~~-------~~~~~d~vid 220 (255)
.|++++|+|+++++|...+..+.. .|++|+++++++++.. ... ...|-.+.. ..+ ..+.+|++|+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~-~G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKE-EGSNVINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCeEEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 468999999999999998888877 4999999988765432 111 112322221 111 1246899999
Q ss_pred CCCC
Q 025278 221 AVGK 224 (255)
Q Consensus 221 ~~G~ 224 (255)
+.|.
T Consensus 79 ~Ag~ 82 (258)
T PRK06398 79 NAGI 82 (258)
T ss_pred CCCC
Confidence 9884
No 317
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.18 E-value=0.036 Score=45.60 Aligned_cols=74 Identities=23% Similarity=0.317 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecC-hhhHHHHHHcCCCEE-EcCCCcc-ccc-------cCCCccEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDLLRSLGADLA-IDYTKEN-IED-------LPEKFDVVF 219 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~-~~~~~~~~~~g~~~v-~~~~~~~-~~~-------~~~~~d~vi 219 (255)
.+++++|+|++|++|...++.+.. .|.+|+++.++ +++.+.+++.+...+ .|-.+.. ..+ ..+++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~-~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLR-EGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999998888877 48998877654 444444444343221 2322221 111 124689999
Q ss_pred ECCCC
Q 025278 220 DAVGK 224 (255)
Q Consensus 220 d~~G~ 224 (255)
.+.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 99984
No 318
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.038 Score=46.48 Aligned_cols=37 Identities=24% Similarity=0.374 Sum_probs=31.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (255)
-.+++++|+||++++|...++.+... |+++++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~-G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeeCCc
Confidence 46789999999999999988877764 99999887654
No 319
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.18 E-value=0.035 Score=45.08 Aligned_cols=74 Identities=18% Similarity=0.296 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-EEcCCCccccc----------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AIDYTKENIED----------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~----------~~~~ 214 (255)
.+++++|+|++|++|...+..+.. .|.+|+++++++++.+.. +..+... ++..+-.+..+ ..++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~-~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAK-EGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999998887776 489999999987765543 2223222 22222111111 1247
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999999884
No 320
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.18 E-value=0.039 Score=45.33 Aligned_cols=74 Identities=27% Similarity=0.426 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCC-EEE--cCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD-LAI--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~-~~~-------~~~~ 214 (255)
.+++++|+|++|++|...+..+.. .|++++++++++++++.+ ++.+.. ..+ |..+.. ... ..+.
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAG-AGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999998887776 499999999987765443 233422 122 222211 111 1236
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 89 id~vi~~ag~ 98 (256)
T PRK06124 89 LDILVNNVGA 98 (256)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 321
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.18 E-value=0.023 Score=48.07 Aligned_cols=73 Identities=18% Similarity=0.238 Sum_probs=45.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEecCh---hhHHHH-HHcC---CC---EEEcCCCc-cccccCCCcc
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSST---AKLDLL-RSLG---AD---LAIDYTKE-NIEDLPEKFD 216 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~---~~~~~~-~~~g---~~---~v~~~~~~-~~~~~~~~~d 216 (255)
..+++++|+| +|++|.+++..+... |++ ++++.|+. +|.+.+ +++. .. ...+..+. .+.+....+|
T Consensus 124 ~~~k~vlI~G-AGGagrAia~~La~~-G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D 201 (289)
T PRK12548 124 VKGKKLTVIG-AGGAATAIQVQCALD-GAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD 201 (289)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence 3578999999 589999988777664 775 88888885 454433 3332 11 11222211 1222334679
Q ss_pred EEEECCC
Q 025278 217 VVFDAVG 223 (255)
Q Consensus 217 ~vid~~G 223 (255)
++|+|+.
T Consensus 202 ilINaTp 208 (289)
T PRK12548 202 ILVNATL 208 (289)
T ss_pred EEEEeCC
Confidence 9999985
No 322
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.17 E-value=0.02 Score=46.53 Aligned_cols=70 Identities=24% Similarity=0.347 Sum_probs=52.6
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh--hHHHHHHcCCCEEEcCCCcc---ccccCCCccEEEECCCCc
Q 025278 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGADLAIDYTKEN---IEDLPEKFDVVFDAVGKM 225 (255)
Q Consensus 154 VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~--~~~~~~~~g~~~v~~~~~~~---~~~~~~~~d~vid~~G~~ 225 (255)
|+|+||+|.+|...++.+.. .+.+|.++.|+.. +.+.++..|+..+ ..+-.+ ..+..+|+|.||-+++..
T Consensus 1 I~V~GatG~~G~~v~~~L~~-~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLS-AGFSVRALVRDPSSDRAQQLQALGAEVV-EADYDDPESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHh-CCCCcEEEEeccchhhhhhhhcccceEe-ecccCCHHHHHHHHcCCceEEeecCcc
Confidence 78999999999999999998 5999999999864 3555677888654 333222 233357999999999843
No 323
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.17 E-value=0.032 Score=45.87 Aligned_cols=74 Identities=18% Similarity=0.259 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh--hHHHHHHcCCCE-EEcCCCcc---ccc-------cCCCcc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGADL-AIDYTKEN---IED-------LPEKFD 216 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~--~~~~~~~~g~~~-v~~~~~~~---~~~-------~~~~~d 216 (255)
.|++++|+|++|++|...++.+.. .|++|+.+++++. ..+.+++.+... .+..+-.+ ..+ ..+.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~-~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAE-AGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 478999999999999999988877 4999998866432 223334444321 22222111 111 124689
Q ss_pred EEEECCCC
Q 025278 217 VVFDAVGK 224 (255)
Q Consensus 217 ~vid~~G~ 224 (255)
++|+++|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999984
No 324
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.037 Score=44.39 Aligned_cols=72 Identities=17% Similarity=0.251 Sum_probs=48.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH-cCCCEEEcCCCccccc---c---CCCccEEEECCC
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED---L---PEKFDVVFDAVG 223 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~---~---~~~~d~vid~~G 223 (255)
.++++|+|++|.+|...+..+.. . .+|++++++.++.+.+.+ .....++..+-.+..+ . .+++|++|.+.|
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~-~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 80 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAP-T-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG 80 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHh-h-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 36899999999999998888876 4 889999998877665542 2112233222222111 1 136999999998
Q ss_pred C
Q 025278 224 K 224 (255)
Q Consensus 224 ~ 224 (255)
.
T Consensus 81 ~ 81 (227)
T PRK08219 81 V 81 (227)
T ss_pred c
Confidence 5
No 325
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.033 Score=45.42 Aligned_cols=43 Identities=21% Similarity=0.322 Sum_probs=35.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHc
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL 195 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~ 195 (255)
.+++|+||+|++|...+..+.. .|.+|+++++++++++.+.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAK-QGWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHh-CCCEEEEEECCHHHHHHHHHh
Confidence 5799999999999987777766 499999999998887766543
No 326
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.036 Score=46.24 Aligned_cols=74 Identities=18% Similarity=0.264 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-EEcCCCccccc----------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AIDYTKENIED----------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~----------~~~~ 214 (255)
..++++|+||+|++|...+..+.. .|.+|+++.++.++.+.+ +..+... .+..+-.+..+ ..++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAA-AGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 446899999999999999888877 489999888877665433 2234322 22222112111 1246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.++|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 327
>PRK08317 hypothetical protein; Provisional
Probab=96.13 E-value=0.035 Score=44.96 Aligned_cols=101 Identities=19% Similarity=0.178 Sum_probs=64.1
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHh-cCCcEEEEecChhhHHHHHHc----CCC-EEEcCCCccccccCCCcc
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFD 216 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~~d 216 (255)
++...+.++++||-.| +|. |..+..+++.. ...++++++.+++.++.+++. +.. .+...+........+.+|
T Consensus 12 ~~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 89 (241)
T PRK08317 12 FELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFD 89 (241)
T ss_pred HHHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCce
Confidence 3567788999999999 665 88888888875 247899999999988888654 111 112211111111124689
Q ss_pred EEEECCC------CccceeeeeeccccCCceEEEEe
Q 025278 217 VVFDAVG------KMCISIVYQKCDKFQEKSLINFG 246 (255)
Q Consensus 217 ~vid~~G------~~~~~~~~~~~~~~~~G~~v~~G 246 (255)
+|+-.-. .......+.+.++ ++|.+++..
T Consensus 90 ~v~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~ 124 (241)
T PRK08317 90 AVRSDRVLQHLEDPARALAEIARVLR-PGGRVVVLD 124 (241)
T ss_pred EEEEechhhccCCHHHHHHHHHHHhc-CCcEEEEEe
Confidence 8885422 1223334456666 789988765
No 328
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.13 E-value=0.039 Score=46.35 Aligned_cols=95 Identities=24% Similarity=0.250 Sum_probs=58.2
Q ss_pred ccchhHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccc
Q 025278 131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (255)
Q Consensus 131 ~l~~~~~ta~~~l~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 209 (255)
..|++....+..++... --.|++|+|+|.+.-+|.-+++++... +++|++..+.... ..
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~-gatVtv~~s~t~~-------------------l~ 196 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQK-NASVTILHSRSKD-------------------MA 196 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCchh-------------------HH
Confidence 44666555555565544 347899999996666999999999884 8999988764322 22
Q ss_pred ccCCCccEEEECCCCccceeeeeeccccCCceEEEEeec
Q 025278 210 DLPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 210 ~~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
+..+.+|+||-++|.+.... ..+.+ ++-.++-+|..
T Consensus 197 ~~~~~ADIVIsAvg~p~~i~--~~~vk-~gavVIDvGi~ 232 (286)
T PRK14175 197 SYLKDADVIVSAVGKPGLVT--KDVVK-EGAVIIDVGNT 232 (286)
T ss_pred HHHhhCCEEEECCCCCcccC--HHHcC-CCcEEEEcCCC
Confidence 22345666666666554221 13333 34445555554
No 329
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.12 E-value=0.036 Score=45.65 Aligned_cols=73 Identities=26% Similarity=0.345 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCC-EEE--cCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD-LAI--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~-~~~-------~~~~ 214 (255)
.++++||+||++++|...++.+.. .|++|+++.++ ++.+.+ .+.+.+ ..+ |..+.. ... ..+.
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~-~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAK-AGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999888877 49999999887 333222 233432 122 222211 111 1236
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999999884
No 330
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.11 E-value=0.08 Score=42.63 Aligned_cols=101 Identities=18% Similarity=0.082 Sum_probs=62.8
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEecChhhHHHHH----HcCCCE--EEcCCCccccccCCC
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEK 214 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~--v~~~~~~~~~~~~~~ 214 (255)
.++...++++++||=+| + +.|..++.+++... ..+|+.++.+++-.+.++ ++|.+. ++..+..........
T Consensus 69 ~~~~l~~~~~~~VLDiG-~-GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~~ 146 (215)
T TIGR00080 69 MTELLELKPGMKVLEIG-T-GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLAP 146 (215)
T ss_pred HHHHhCCCCcCEEEEEC-C-CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccCC
Confidence 34556788999999998 4 45778888887642 235999999988777664 345332 222221111111247
Q ss_pred ccEEEECCCCccceeeeeeccccCCceEEEE
Q 025278 215 FDVVFDAVGKMCISIVYQKCDKFQEKSLINF 245 (255)
Q Consensus 215 ~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~ 245 (255)
+|+|+-..........+.+.++ ++|+++..
T Consensus 147 fD~Ii~~~~~~~~~~~~~~~L~-~gG~lv~~ 176 (215)
T TIGR00080 147 YDRIYVTAAGPKIPEALIDQLK-EGGILVMP 176 (215)
T ss_pred CCEEEEcCCcccccHHHHHhcC-cCcEEEEE
Confidence 9998855444444445566677 88997764
No 331
>PRK06141 ornithine cyclodeaminase; Validated
Probab=96.11 E-value=0.099 Score=44.76 Aligned_cols=95 Identities=20% Similarity=0.161 Sum_probs=58.2
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHH-HHc---CCCEEEcCCCccccccCCCccEEEECC
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSL---GADLAIDYTKENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~-~~~---g~~~v~~~~~~~~~~~~~~~d~vid~~ 222 (255)
....++|+|+| +|..|...+..+....+ .++.+..+++++.+.+ +++ |..... . .+..+..++.|+|+.++
T Consensus 122 ~~~~~~v~iiG-~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~--~~~~~av~~aDIVi~aT 197 (314)
T PRK06141 122 RKDASRLLVVG-TGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V--TDLEAAVRQADIISCAT 197 (314)
T ss_pred CCCCceEEEEC-CcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e--CCHHHHHhcCCEEEEee
Confidence 35678999999 99999998764444334 6788889998886654 343 322111 1 12233346899999999
Q ss_pred CCccceeeeeeccccCCceEEEEeec
Q 025278 223 GKMCISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 223 G~~~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
++.... .-...++ ++-.+..+|..
T Consensus 198 ~s~~pv-l~~~~l~-~g~~i~~ig~~ 221 (314)
T PRK06141 198 LSTEPL-VRGEWLK-PGTHLDLVGNF 221 (314)
T ss_pred CCCCCE-ecHHHcC-CCCEEEeeCCC
Confidence 876322 2234454 43445555543
No 332
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.10 E-value=0.037 Score=45.09 Aligned_cols=74 Identities=18% Similarity=0.218 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-EEcCCCcccc---c-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AIDYTKENIE---D-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~---~-------~~~~ 214 (255)
.+++++|+||+|.+|...+..+.. .|.+|++++++.++...+ ++.+.+. ++..+-.+.. + ....
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAA-DGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 467999999999999998887777 489999999986654433 2333221 2221111111 1 1136
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 333
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.04 Score=45.75 Aligned_cols=72 Identities=17% Similarity=0.169 Sum_probs=47.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-EEcCCCccccc----------cCCCcc
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AIDYTKENIED----------LPEKFD 216 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~----------~~~~~d 216 (255)
++++|+|++|++|...+..+.. .|.+|++++++.++.+.+ ++.+.+. .+..+-.+..+ ..+++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAR-EGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3789999999999998887777 499999999988776543 2233332 22111111111 124799
Q ss_pred EEEECCCC
Q 025278 217 VVFDAVGK 224 (255)
Q Consensus 217 ~vid~~G~ 224 (255)
++|.+.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99999984
No 334
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.09 E-value=0.043 Score=44.62 Aligned_cols=74 Identities=24% Similarity=0.438 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCE-EE--cCCCcc-ccc-------cCCCccE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AI--DYTKEN-IED-------LPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-v~--~~~~~~-~~~-------~~~~~d~ 217 (255)
++++++|+|++|++|...+..+.. .|.+|+...++.++++.+ .+++... ++ |-.+.+ ..+ ..+++|+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHA-QGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467999999999999998888777 488888888877776654 3444221 22 222211 111 1246899
Q ss_pred EEECCCC
Q 025278 218 VFDAVGK 224 (255)
Q Consensus 218 vid~~G~ 224 (255)
+|.+.|.
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9999984
No 335
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.07 E-value=0.017 Score=49.56 Aligned_cols=42 Identities=24% Similarity=0.232 Sum_probs=36.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (255)
.|++++|+||++++|...+..+.. .|++|+++++++++++.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~-~G~~Vil~~R~~~~l~~~ 93 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLAR-KGLNLVLVARNPDKLKDV 93 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHH-CCCCEEEEECCHHHHHHH
Confidence 589999999999999998777766 499999999999887654
No 336
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.07 E-value=0.022 Score=48.69 Aligned_cols=74 Identities=23% Similarity=0.301 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHc----CC--C-EEE--cCCC-ccccccCCCccEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA--D-LAI--DYTK-ENIEDLPEKFDVVF 219 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~--~-~v~--~~~~-~~~~~~~~~~d~vi 219 (255)
.|++|+|+||+|.+|...+..+.. .|.+|+++.++.++.+...++ +. . ..+ |..+ ..+.+..+++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLL-RGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 578999999999999998887777 489998888876544332211 11 1 112 2111 12223345799999
Q ss_pred ECCCC
Q 025278 220 DAVGK 224 (255)
Q Consensus 220 d~~G~ 224 (255)
.+++.
T Consensus 83 h~A~~ 87 (322)
T PLN02986 83 HTASP 87 (322)
T ss_pred EeCCC
Confidence 99873
No 337
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.03 E-value=0.075 Score=43.24 Aligned_cols=77 Identities=17% Similarity=0.245 Sum_probs=49.6
Q ss_pred HHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCC---cEEEEecC----hhh--------HHHHHHcCCCEEEcCC
Q 025278 141 EGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSS----TAK--------LDLLRSLGADLAIDYT 204 (255)
Q Consensus 141 ~~l~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~---~vi~~~~~----~~~--------~~~~~~~g~~~v~~~~ 204 (255)
.+++... --.+++++|+| +|+.|..++..+... |. ++++++++ .+| .++++.++... .+
T Consensus 14 ~al~~~g~~l~~~rvlvlG-AGgAg~aiA~~L~~~-G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~-- 88 (226)
T cd05311 14 NALKLVGKKIEEVKIVING-AGAAGIAIARLLLAA-GAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG-- 88 (226)
T ss_pred HHHHHhCCCccCCEEEEEC-chHHHHHHHHHHHHc-CcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc--
Confidence 3444333 24568999999 899999988888775 65 58888887 444 33445554221 11
Q ss_pred CccccccCCCccEEEECCC
Q 025278 205 KENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 205 ~~~~~~~~~~~d~vid~~G 223 (255)
.++.+..+++|++|++++
T Consensus 89 -~~l~~~l~~~dvlIgaT~ 106 (226)
T cd05311 89 -GTLKEALKGADVFIGVSR 106 (226)
T ss_pred -CCHHHHHhcCCEEEeCCC
Confidence 123233456899999997
No 338
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.039 Score=45.07 Aligned_cols=36 Identities=28% Similarity=0.414 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (255)
.+++++|+|++|++|...+..+.. .|.+|+++.++.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~-~G~~V~~~~r~~ 40 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAG-AGAHVVVNYRQK 40 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHH-CCCEEEEEeCCc
Confidence 468999999999999998888877 489999888764
No 339
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.01 E-value=0.024 Score=50.01 Aligned_cols=78 Identities=23% Similarity=0.341 Sum_probs=50.7
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHH-------HHHHc-CCCEE-EcCCCcc-ccccCC--
Q 025278 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD-------LLRSL-GADLA-IDYTKEN-IEDLPE-- 213 (255)
Q Consensus 146 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~-------~~~~~-g~~~v-~~~~~~~-~~~~~~-- 213 (255)
.+...+.+|+|+||+|.+|..++..+.. .|.+|++++++..+.+ ..+.. +...+ .|..+.+ +....+
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~-~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~ 133 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVR-RGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE 133 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh
Confidence 3445678999999999999999988877 4999999998765432 11112 23222 2333222 222112
Q ss_pred --CccEEEECCCC
Q 025278 214 --KFDVVFDAVGK 224 (255)
Q Consensus 214 --~~d~vid~~G~ 224 (255)
++|+||+|.+.
T Consensus 134 ~~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 GDPVDVVVSCLAS 146 (390)
T ss_pred CCCCcEEEECCcc
Confidence 69999999874
No 340
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.01 E-value=0.047 Score=45.22 Aligned_cols=74 Identities=20% Similarity=0.262 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-EEcCCCccccc----------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AIDYTKENIED----------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~----------~~~~ 214 (255)
.+++++|+|+++++|...+..+.. .|++++++.+++++.+.+ ++.+... .+..+-.+..+ ..+.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~-~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAK-AGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 568999999999999988877777 499999999888766543 2334322 22222111111 1246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 88 id~li~~ag~ 97 (265)
T PRK07097 88 IDILVNNAGI 97 (265)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 341
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.00 E-value=0.035 Score=44.27 Aligned_cols=75 Identities=20% Similarity=0.346 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-CchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcCCCE-EEcCCCc-cccc--------cCCCccE
Q 025278 150 AGKSILVLGG-AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADL-AIDYTKE-NIED--------LPEKFDV 217 (255)
Q Consensus 150 ~g~~VlI~ga-~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~-v~~~~~~-~~~~--------~~~~~d~ 217 (255)
..+.|||+|+ .|++|.+.+.-..+ .|+.|+++.|+-++...+. ++|... =+|-.++ +..+ ..+..|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~-~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFAR-NGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHh-CCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 3467899885 79999987766665 5999999999999988776 777432 2333322 2111 1246899
Q ss_pred EEECCCCc
Q 025278 218 VFDAVGKM 225 (255)
Q Consensus 218 vid~~G~~ 225 (255)
.++..|.+
T Consensus 85 L~NNAG~~ 92 (289)
T KOG1209|consen 85 LYNNAGQS 92 (289)
T ss_pred EEcCCCCC
Confidence 99988843
No 342
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.032 Score=45.97 Aligned_cols=71 Identities=27% Similarity=0.378 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCE-EEcCCCcc-cc-------ccCCCccEEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTKEN-IE-------DLPEKFDVVFD 220 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~-~~-------~~~~~~d~vid 220 (255)
.+++++|+|++|++|...++.+.. .|++|+++++++++.. .-.... ..|-.+.+ .. +..+.+|++|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~-~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLE-AGARVVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHH-CCCEEEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 578999999999999998888877 4999999988764321 101111 12222211 11 11246899999
Q ss_pred CCCC
Q 025278 221 AVGK 224 (255)
Q Consensus 221 ~~G~ 224 (255)
+.|.
T Consensus 84 ~ag~ 87 (260)
T PRK06523 84 VLGG 87 (260)
T ss_pred CCcc
Confidence 9983
No 343
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.99 E-value=0.044 Score=46.85 Aligned_cols=73 Identities=15% Similarity=0.250 Sum_probs=48.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHH-HHcCC---C-EE--EcCCCcc-cc-------ccCCC
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSLGA---D-LA--IDYTKEN-IE-------DLPEK 214 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~-~~~g~---~-~v--~~~~~~~-~~-------~~~~~ 214 (255)
+++++|+|+++++|...+..+.. .| .+|+++.+++++.+.+ ++++. . .+ .|-.+.. .. +..++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~-~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAA-TGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 57899999999999998877766 48 8999999988776544 33321 1 11 2322211 11 11246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|+++|.
T Consensus 82 iD~lI~nAG~ 91 (314)
T TIGR01289 82 LDALVCNAAV 91 (314)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 344
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.04 Score=44.94 Aligned_cols=40 Identities=23% Similarity=0.333 Sum_probs=34.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (255)
++++|+||+|++|...++.+.+ .|.+|+++++++++.+..
T Consensus 2 ~~vlItGas~giG~~~a~~l~~-~G~~Vi~~~r~~~~~~~~ 41 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAA-AGARLYLAARDVERLERL 41 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHH
Confidence 5799999999999998888887 499999999988776543
No 345
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.95 E-value=0.034 Score=47.56 Aligned_cols=74 Identities=20% Similarity=0.232 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCC---CEEE--cCCCc-cccccCCCccEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA---DLAI--DYTKE-NIEDLPEKFDVVF 219 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~---~~v~--~~~~~-~~~~~~~~~d~vi 219 (255)
.+++|||+||+|.+|...+..+.. .|.+|++++++.++.+.... .+. -..+ |..+. .+.+..+++|+||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLF-RGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHH-CCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 478999999999999999888877 48999888777654332211 111 1122 22222 2223345789999
Q ss_pred ECCCC
Q 025278 220 DAVGK 224 (255)
Q Consensus 220 d~~G~ 224 (255)
.++|.
T Consensus 83 h~A~~ 87 (325)
T PLN02989 83 HTASP 87 (325)
T ss_pred EeCCC
Confidence 99883
No 346
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.95 E-value=0.038 Score=44.50 Aligned_cols=96 Identities=14% Similarity=0.026 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCEE-----------------EcCCCccccc
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-----------------IDYTKENIED 210 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~v-----------------~~~~~~~~~~ 210 (255)
.++.+||+.| + |.|.-+..+|++ |.+|++++.++.-++.+ ++.+.... +..+-.++..
T Consensus 33 ~~~~rvLd~G-C-G~G~da~~LA~~--G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 33 PAGARVFVPL-C-GKSLDLAWLAEQ--GHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCeEEEeC-C-CchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 5778999998 4 459999999874 99999999999888775 33332110 1111011111
Q ss_pred -cCCCccEEEECCCC--------ccceeeeeeccccCCceEEEEeecc
Q 025278 211 -LPEKFDVVFDAVGK--------MCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 211 -~~~~~d~vid~~G~--------~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
....+|.|+|+.-- ........++++ ++|++++++...
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLk-pgG~~ll~~~~~ 155 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLP-PGARQLLITLDY 155 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcC-CCCeEEEEEEEc
Confidence 12358999997541 112234466677 899877777643
No 347
>PLN02427 UDP-apiose/xylose synthase
Probab=95.94 E-value=0.034 Score=48.90 Aligned_cols=76 Identities=13% Similarity=0.088 Sum_probs=49.7
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCC------CEEE--cCCC-ccccccCCCccEE
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA------DLAI--DYTK-ENIEDLPEKFDVV 218 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~------~~v~--~~~~-~~~~~~~~~~d~v 218 (255)
.-+.++|||+||+|-+|...++.+...++.+|++++++.++.+.+...+. -..+ |-.+ ..+.+..+++|+|
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V 90 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT 90 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence 34456899999999999988887776335889999887766555433321 1112 2111 1223334579999
Q ss_pred EECCC
Q 025278 219 FDAVG 223 (255)
Q Consensus 219 id~~G 223 (255)
|.+++
T Consensus 91 iHlAa 95 (386)
T PLN02427 91 INLAA 95 (386)
T ss_pred EEccc
Confidence 99987
No 348
>PRK06128 oxidoreductase; Provisional
Probab=95.94 E-value=0.046 Score=46.28 Aligned_cols=74 Identities=20% Similarity=0.330 Sum_probs=46.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh--hH----HHHHHcCCCE-EE--cCCCcc-cc-------ccC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KL----DLLRSLGADL-AI--DYTKEN-IE-------DLP 212 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~--~~----~~~~~~g~~~-v~--~~~~~~-~~-------~~~ 212 (255)
.++++||+||+|++|...+..+... |++|+++.++.+ +. +.+++.|... .+ |..+.. .. +..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~-G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFARE-GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHc-CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999988888774 999987765432 11 2233445332 22 222211 11 112
Q ss_pred CCccEEEECCCC
Q 025278 213 EKFDVVFDAVGK 224 (255)
Q Consensus 213 ~~~d~vid~~G~ 224 (255)
+++|++|++.|.
T Consensus 133 g~iD~lV~nAg~ 144 (300)
T PRK06128 133 GGLDILVNIAGK 144 (300)
T ss_pred CCCCEEEECCcc
Confidence 478999999984
No 349
>PRK12743 oxidoreductase; Provisional
Probab=95.92 E-value=0.05 Score=44.77 Aligned_cols=73 Identities=16% Similarity=0.155 Sum_probs=46.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec-ChhhHHHH----HHcCCCE-EE--cCCCcc-cc-------ccCCC
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADL-AI--DYTKEN-IE-------DLPEK 214 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~-v~--~~~~~~-~~-------~~~~~ 214 (255)
+++++|+||++++|..+++.+.. .|.+|+++.+ +.++.+.+ +..+... .+ |..+.. .. +..+.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~-~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQ-QGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999998888 4999988754 44443332 3345332 22 222211 10 11246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 81 id~li~~ag~ 90 (256)
T PRK12743 81 IDVLVNNAGA 90 (256)
T ss_pred CCEEEECCCC
Confidence 8999999884
No 350
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=95.91 E-value=0.005 Score=30.65 Aligned_cols=22 Identities=36% Similarity=0.502 Sum_probs=14.9
Q ss_pred CeEEEEcccCCCccceEEeecccCCCC
Q 025278 1 MKAWVYKEYGNSQSVLKFETNVEVPSL 27 (255)
Q Consensus 1 mka~v~~~~~~~~~~l~~~~~~~~p~~ 27 (255)
|||+++.++++. +++ ++|.|.+
T Consensus 1 MkAv~y~G~~~v----~ve-~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKDV----RVE-EVPDPKI 22 (23)
T ss_dssp -EEEEEEETTEE----EEE-EE----S
T ss_pred CcceEEeCCCce----EEE-ECCCccc
Confidence 999999998886 888 8888865
No 351
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.91 E-value=0.043 Score=45.36 Aligned_cols=74 Identities=22% Similarity=0.262 Sum_probs=46.0
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHhcCCcEEEEecCh---hhHHHH-HHc-CCC-EE--EcCCCcc-cc-------cc
Q 025278 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSST---AKLDLL-RSL-GAD-LA--IDYTKEN-IE-------DL 211 (255)
Q Consensus 150 ~g~~VlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~---~~~~~~-~~~-g~~-~v--~~~~~~~-~~-------~~ 211 (255)
.+++++|+||+ +++|.+.++.+.. .|++|+++.++. ++++.+ +++ +.. .. .|-.+.. .. +.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHN-AGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-CCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 47899999986 7999998887777 499999886543 334433 333 211 12 2322221 11 11
Q ss_pred CCCccEEEECCCC
Q 025278 212 PEKFDVVFDAVGK 224 (255)
Q Consensus 212 ~~~~d~vid~~G~ 224 (255)
.+.+|++++++|.
T Consensus 85 ~g~ld~lv~nag~ 97 (257)
T PRK08594 85 VGVIHGVAHCIAF 97 (257)
T ss_pred CCCccEEEECccc
Confidence 2469999999883
No 352
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.91 E-value=0.06 Score=45.32 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=28.2
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~ 184 (255)
.-.|++|+|+|+++-+|...++++... +++|.+..+
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~-gatVtv~~~ 191 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNA-NATVTICHS 191 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhC-CCEEEEEeC
Confidence 357889999994444999999988874 787777765
No 353
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.90 E-value=0.046 Score=45.28 Aligned_cols=74 Identities=22% Similarity=0.331 Sum_probs=46.0
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHhcCCcEEEEecC---hhhHHHH-HHcCCCEEE--cCCCcc-ccc-------cCC
Q 025278 150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSS---TAKLDLL-RSLGADLAI--DYTKEN-IED-------LPE 213 (255)
Q Consensus 150 ~g~~VlI~ga--~g~~G~~a~~~a~~~~g~~vi~~~~~---~~~~~~~-~~~g~~~v~--~~~~~~-~~~-------~~~ 213 (255)
.+++++|+|| ++++|.+.++.+.. .|++|+++.+. +++++.+ ++++....+ |-.+.+ ..+ ..+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~-~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKR-EGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHH-CCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 5789999996 57999998777766 49999887543 3444333 344532222 222211 111 124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|++.|.
T Consensus 84 ~iD~lvnnAG~ 94 (260)
T PRK06997 84 GLDGLVHSIGF 94 (260)
T ss_pred CCcEEEEcccc
Confidence 79999999984
No 354
>PLN00203 glutamyl-tRNA reductase
Probab=95.86 E-value=0.031 Score=51.03 Aligned_cols=73 Identities=21% Similarity=0.361 Sum_probs=51.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecChhhHHHHH-HcC-CCE-EEcCCCccccccCCCccEEEECCCCcc
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLG-ADL-AIDYTKENIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~-~~g-~~~-v~~~~~~~~~~~~~~~d~vid~~G~~~ 226 (255)
+.+|+|+| +|.+|.+++..+... |. +++++.++.++.+.+. +++ ... +... .+..+...+.|+||.|+++..
T Consensus 266 ~kkVlVIG-AG~mG~~~a~~L~~~-G~~~V~V~nRs~era~~La~~~~g~~i~~~~~--~dl~~al~~aDVVIsAT~s~~ 341 (519)
T PLN00203 266 SARVLVIG-AGKMGKLLVKHLVSK-GCTKMVVVNRSEERVAALREEFPDVEIIYKPL--DEMLACAAEADVVFTSTSSET 341 (519)
T ss_pred CCEEEEEe-CHHHHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHhCCCceEeecH--hhHHHHHhcCCEEEEccCCCC
Confidence 68999999 799999999988874 75 6888899988876654 553 321 1111 122233468999999998665
Q ss_pred c
Q 025278 227 I 227 (255)
Q Consensus 227 ~ 227 (255)
-
T Consensus 342 p 342 (519)
T PLN00203 342 P 342 (519)
T ss_pred C
Confidence 4
No 355
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.85 E-value=0.079 Score=44.75 Aligned_cols=73 Identities=15% Similarity=0.191 Sum_probs=43.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh---hHHHH-HHcCCC----E-EEcCCCc-cccccCCCccEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---KLDLL-RSLGAD----L-AIDYTKE-NIEDLPEKFDVVF 219 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~---~~~~~-~~~g~~----~-v~~~~~~-~~~~~~~~~d~vi 219 (255)
.+++++|+| +|+.+.+++..+...+..++.++.|+++ |.+.+ ++++.. . +....+. .+.+....+|+||
T Consensus 123 ~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI 201 (288)
T PRK12749 123 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT 201 (288)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence 567999999 7888988666555543357778888843 44433 344321 1 1111110 1122235789999
Q ss_pred ECCC
Q 025278 220 DAVG 223 (255)
Q Consensus 220 d~~G 223 (255)
+|+.
T Consensus 202 NaTp 205 (288)
T PRK12749 202 NGTK 205 (288)
T ss_pred ECCC
Confidence 9976
No 356
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=95.85 E-value=0.065 Score=40.61 Aligned_cols=97 Identities=16% Similarity=0.193 Sum_probs=54.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEE-e-cChhhHHHHHH----cC---CCE-------EEcCCC------ccccc
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAA-T-SSTAKLDLLRS----LG---ADL-------AIDYTK------ENIED 210 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~-~~~~~~~~~~~----~g---~~~-------v~~~~~------~~~~~ 210 (255)
+|.|+| .|.+|...++.+......+++++ + .+.+-+.++-+ .| .+. +++... .+..+
T Consensus 2 kv~I~G-~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~ 80 (149)
T smart00846 2 KVGING-FGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN 80 (149)
T ss_pred EEEEEC-cCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence 588999 79999998888775456777765 3 24555555433 22 111 111110 00000
Q ss_pred c---CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccCC
Q 025278 211 L---PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQE 251 (255)
Q Consensus 211 ~---~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~~ 251 (255)
. ..++|+|+||+|...+...+..-++ .+-+-|+++.++++
T Consensus 81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~-~GakkViisap~~~ 123 (149)
T smart00846 81 LPWKELGVDIVVECTGKFTTREKASAHLK-AGAKKVIISAPAKD 123 (149)
T ss_pred CcccccCCeEEEeccccccchHHHHHHHH-cCCCEEEeCCCCCC
Confidence 0 1378999999997554444433333 24456666666554
No 357
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.84 E-value=0.057 Score=49.00 Aligned_cols=71 Identities=24% Similarity=0.313 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh-----hHHHHHHcCCCEEEcCCCccccccCCCccEEEECCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-----KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-----~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G 223 (255)
..+++|+|+| .|.+|+.++.+++. .|.+|++++.++. ..+.+++.|.....+.... ...++|+||-++|
T Consensus 14 ~~~~~v~viG-~G~~G~~~A~~L~~-~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~----~~~~~D~Vv~s~G 87 (480)
T PRK01438 14 WQGLRVVVAG-LGVSGFAAADALLE-LGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT----LPEDTDLVVTSPG 87 (480)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc----ccCCCCEEEECCC
Confidence 3567899999 89999999999988 4999999986542 2344567787655433221 2346899999998
Q ss_pred Cc
Q 025278 224 KM 225 (255)
Q Consensus 224 ~~ 225 (255)
-+
T Consensus 88 i~ 89 (480)
T PRK01438 88 WR 89 (480)
T ss_pred cC
Confidence 53
No 358
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.82 E-value=0.053 Score=44.27 Aligned_cols=74 Identities=20% Similarity=0.286 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEE-ecChhhHHHH----HHcCCCE-EE--cCCCcc-cc----c---cCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL----RSLGADL-AI--DYTKEN-IE----D---LPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~----~~~g~~~-v~--~~~~~~-~~----~---~~~ 213 (255)
++++++|+||+|++|...+..+.. .|.+|++. .++.++.+.+ ++.+... .+ |..+.. .. + ..+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~-~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAE-EGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467999999999999998888887 48888764 5666554332 3334332 22 222211 11 1 123
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 68999999884
No 359
>PRK05599 hypothetical protein; Provisional
Probab=95.82 E-value=0.055 Score=44.39 Aligned_cols=71 Identities=25% Similarity=0.323 Sum_probs=47.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCC--EEE--cCCCcc-cc-------ccCCCc
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD--LAI--DYTKEN-IE-------DLPEKF 215 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~--~v~--~~~~~~-~~-------~~~~~~ 215 (255)
++++|+||++++|...+..+. . |.+|+++.+++++++.+ ++.|.+ ..+ |-.+.+ .. +..+.+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~-g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H-GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 368999999999999888765 3 89999999988877654 233432 222 222211 11 112479
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|++.|.
T Consensus 79 d~lv~nag~ 87 (246)
T PRK05599 79 SLAVVAFGI 87 (246)
T ss_pred CEEEEecCc
Confidence 999999884
No 360
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.053 Score=45.23 Aligned_cols=37 Identities=27% Similarity=0.476 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~ 187 (255)
.+++++|+||+|++|...+..+.. .|.+|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAAR-DGANIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEecccc
Confidence 467999999999999998888777 4999999988654
No 361
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.80 E-value=0.047 Score=41.99 Aligned_cols=80 Identities=21% Similarity=0.269 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh-hhHHHHHHcCCCEEEcCCCcccccc-----------CCCcc
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYTKENIEDL-----------PEKFD 216 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~-----------~~~~d 216 (255)
.+|-.-+|+|+++++|.+++.-+... |+.++..+... .-.+.++++|-..++.+.+...++. -+..|
T Consensus 7 ~kglvalvtggasglg~ataerlakq-gasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQ-GASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhc-CceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence 35556799999999999988877764 99999998644 4466789999887776644322211 23589
Q ss_pred EEEECCCCcccee
Q 025278 217 VVFDAVGKMCISI 229 (255)
Q Consensus 217 ~vid~~G~~~~~~ 229 (255)
+.++|.|-.....
T Consensus 86 ~~vncagia~a~k 98 (260)
T KOG1199|consen 86 ALVNCAGIAYAFK 98 (260)
T ss_pred eeeeccceeeeee
Confidence 9999999554433
No 362
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=95.79 E-value=0.031 Score=43.23 Aligned_cols=48 Identities=35% Similarity=0.488 Sum_probs=40.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEE
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA 200 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v 200 (255)
..+|+|+| +|.+|+.|+.+++.+ |++++..+...++++..+..+...+
T Consensus 20 p~~vvv~G-~G~vg~gA~~~~~~l-Ga~v~~~d~~~~~~~~~~~~~~~~i 67 (168)
T PF01262_consen 20 PAKVVVTG-AGRVGQGAAEIAKGL-GAEVVVPDERPERLRQLESLGAYFI 67 (168)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSHHHHHHHHHTTTEES
T ss_pred CeEEEEEC-CCHHHHHHHHHHhHC-CCEEEeccCCHHHHHhhhcccCceE
Confidence 36899999 999999999999997 9999999999999988888776544
No 363
>PRK05855 short chain dehydrogenase; Validated
Probab=95.79 E-value=0.048 Score=50.32 Aligned_cols=74 Identities=27% Similarity=0.351 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-E--EcCCCcc-ccc-------cCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-A--IDYTKEN-IED-------LPEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v--~~~~~~~-~~~-------~~~~ 214 (255)
.+.+++|+||+|++|...++.+.. .|.+|++++++.++.+.+ ++.|... + .|..+.. ..+ ..+.
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAR-EGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 457899999999999998887777 499999999988776544 2334321 2 2222211 111 1246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|+++|.
T Consensus 393 id~lv~~Ag~ 402 (582)
T PRK05855 393 PDIVVNNAGI 402 (582)
T ss_pred CcEEEECCcc
Confidence 8999999984
No 364
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=95.78 E-value=0.016 Score=48.76 Aligned_cols=70 Identities=30% Similarity=0.397 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH-cCCC-EEEcCCCccccccCCCccEEEEC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAIDYTKENIEDLPEKFDVVFDA 221 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~~d~vid~ 221 (255)
.++ .|.|+| .|-+|.-++.+|..+ |++|.+.+.|.+|++.+.. ++-. ++.-++..++++...+.|++|.+
T Consensus 167 ~~~-kv~iiG-GGvvgtnaAkiA~gl-gA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIga 238 (371)
T COG0686 167 LPA-KVVVLG-GGVVGTNAAKIAIGL-GADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGA 238 (371)
T ss_pred CCc-cEEEEC-CccccchHHHHHhcc-CCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEE
Confidence 344 477778 799999999999996 9999999999999999864 4443 34444555566656677777766
No 365
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.74 E-value=0.057 Score=46.86 Aligned_cols=75 Identities=23% Similarity=0.246 Sum_probs=49.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-Hc--CCC-EEEcCC--Cc-cccccCCCccEEEEC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL--GAD-LAIDYT--KE-NIEDLPEKFDVVFDA 221 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~--g~~-~v~~~~--~~-~~~~~~~~~d~vid~ 221 (255)
..+.+|||+|++|.+|...++.+.. .|.+|++++++.++.+.+. .+ +.. .++..+ +. .+.+..+++|+||.+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQ-RGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 4577999999999999999988887 4999999888766554332 22 111 122221 11 122334578999999
Q ss_pred CCC
Q 025278 222 VGK 224 (255)
Q Consensus 222 ~G~ 224 (255)
++.
T Consensus 87 A~~ 89 (353)
T PLN02896 87 AAS 89 (353)
T ss_pred Ccc
Confidence 873
No 366
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.72 E-value=0.043 Score=44.75 Aligned_cols=75 Identities=24% Similarity=0.353 Sum_probs=46.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec-ChhhH-HHH---HHcCCCEE---EcCCCcc-ccc-------cCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKL-DLL---RSLGADLA---IDYTKEN-IED-------LPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~-~~~---~~~g~~~v---~~~~~~~-~~~-------~~~ 213 (255)
.+++++|+|++|++|...++.+... |+++++..+ ++.+. +.+ ++.+.... .|..+.. ..+ ..+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKD-GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4678999999999999999888874 888887543 33322 222 33454332 2222211 111 124
Q ss_pred CccEEEECCCCc
Q 025278 214 KFDVVFDAVGKM 225 (255)
Q Consensus 214 ~~d~vid~~G~~ 225 (255)
++|++|++.|..
T Consensus 81 ~id~li~~ag~~ 92 (246)
T PRK12938 81 EIDVLVNNAGIT 92 (246)
T ss_pred CCCEEEECCCCC
Confidence 789999999853
No 367
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.71 E-value=0.044 Score=44.54 Aligned_cols=74 Identities=30% Similarity=0.412 Sum_probs=47.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEE-ecChhhHHHHH----HcCCCE-EEcCCCccccc---c-------CCC
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLLR----SLGADL-AIDYTKENIED---L-------PEK 214 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~---~-------~~~ 214 (255)
+++++|+|++|++|...+..+.. .|.+++++ ++++++.+.+. +.+... ++..+-.+... . ..+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~-~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAK-EGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 56899999999999998887776 48999988 88877654432 222222 22222111111 1 136
Q ss_pred ccEEEECCCCc
Q 025278 215 FDVVFDAVGKM 225 (255)
Q Consensus 215 ~d~vid~~G~~ 225 (255)
+|++|.+.|..
T Consensus 84 id~vi~~ag~~ 94 (247)
T PRK05565 84 IDILVNNAGIS 94 (247)
T ss_pred CCEEEECCCcC
Confidence 99999998843
No 368
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.70 E-value=0.067 Score=43.78 Aligned_cols=101 Identities=17% Similarity=0.188 Sum_probs=66.6
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHHH----HcCCCEEEcCCCcccccc--CCCc
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDL--PEKF 215 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~--~~~~ 215 (255)
+...++.+|++|+=.| + +.|.+++.+|+..+. .+|+..+..++..+.|+ ++|....+.....+..+. .+.+
T Consensus 87 ~~~~gi~pg~rVlEAG-t-GSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~v 164 (256)
T COG2519 87 VARLGISPGSRVLEAG-T-GSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDV 164 (256)
T ss_pred HHHcCCCCCCEEEEcc-c-CchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecccccccccccc
Confidence 3567889999998766 4 458888899987755 78999999999888874 345333222222222221 2378
Q ss_pred cEEEECCC-CccceeeeeeccccCCceEEEEe
Q 025278 216 DVVFDAVG-KMCISIVYQKCDKFQEKSLINFG 246 (255)
Q Consensus 216 d~vid~~G-~~~~~~~~~~~~~~~~G~~v~~G 246 (255)
|++|=-.. .......+...++ ++|++++|-
T Consensus 165 Dav~LDmp~PW~~le~~~~~Lk-pgg~~~~y~ 195 (256)
T COG2519 165 DAVFLDLPDPWNVLEHVSDALK-PGGVVVVYS 195 (256)
T ss_pred CEEEEcCCChHHHHHHHHHHhC-CCcEEEEEc
Confidence 88874444 4444555566676 789988875
No 369
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=95.69 E-value=0.033 Score=48.15 Aligned_cols=72 Identities=22% Similarity=0.146 Sum_probs=45.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCC----ccccccCCCccEEEECCC
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK----ENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~----~~~~~~~~~~d~vid~~G 223 (255)
++|||+||+|-+|...+..+...++.+|++++++.++...+....--.++..+- ..+.+..+++|+||.+++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa 77 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA 77 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence 379999999999999888887633689999988765544332211112222221 112233457999999866
No 370
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=95.67 E-value=0.056 Score=44.57 Aligned_cols=101 Identities=16% Similarity=0.066 Sum_probs=61.1
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCC-CEEEcCCCccccccCCCccEEEECCC
Q 025278 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 145 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~d~vid~~G 223 (255)
.....++.+||-+| +|. |..+..+++ .+.+++++|.+++.++.+++... ...+..+.+...-..+.+|+|+....
T Consensus 37 ~l~~~~~~~vLDiG-cG~-G~~~~~l~~--~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~~~~~~~fD~V~s~~~ 112 (251)
T PRK10258 37 MLPQRKFTHVLDAG-CGP-GWMSRYWRE--RGSQVTALDLSPPMLAQARQKDAADHYLAGDIESLPLATATFDLAWSNLA 112 (251)
T ss_pred hcCccCCCeEEEee-CCC-CHHHHHHHH--cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccCcCCCCcEEEEEECch
Confidence 33444678899998 665 776666665 37899999999999988876532 22222222221111246999996543
Q ss_pred C------ccceeeeeeccccCCceEEEEeeccC
Q 025278 224 K------MCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 224 ~------~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
- ......+.+.++ ++|.+++.....+
T Consensus 113 l~~~~d~~~~l~~~~~~Lk-~gG~l~~~~~~~~ 144 (251)
T PRK10258 113 VQWCGNLSTALRELYRVVR-PGGVVAFTTLVQG 144 (251)
T ss_pred hhhcCCHHHHHHHHHHHcC-CCeEEEEEeCCCC
Confidence 1 112233355566 7898887655443
No 371
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.67 E-value=0.044 Score=45.36 Aligned_cols=71 Identities=21% Similarity=0.306 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCE-EEcCCCcc-ccc-------cCCCccEEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTKEN-IED-------LPEKFDVVFD 220 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~-~~~-------~~~~~d~vid 220 (255)
.+++++|+|++|++|...++.+.. .|++|+.+++++++.+. ..... ..|..+.. ..+ ..+.+|++|.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~-~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLA-NGANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 468999999999999998888877 49999999887665421 11111 12222211 111 1246899999
Q ss_pred CCCC
Q 025278 221 AVGK 224 (255)
Q Consensus 221 ~~G~ 224 (255)
+.|.
T Consensus 84 ~Ag~ 87 (266)
T PRK06171 84 NAGI 87 (266)
T ss_pred CCcc
Confidence 9984
No 372
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.65 E-value=0.081 Score=43.68 Aligned_cols=73 Identities=14% Similarity=0.277 Sum_probs=46.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec-ChhhHHHH-HH----cCCC-EEE--cCCCcc-cc-------ccC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL-RS----LGAD-LAI--DYTKEN-IE-------DLP 212 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~-~~----~g~~-~v~--~~~~~~-~~-------~~~ 212 (255)
.+++++|+||++++|...+..+.. .|++|+.+.+ ++++.+.. ++ .+.. ..+ |..+.+ .. +..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~-~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQ-SGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 578999999999999998887777 4999887754 44544332 22 2322 222 322211 11 112
Q ss_pred CCccEEEECCC
Q 025278 213 EKFDVVFDAVG 223 (255)
Q Consensus 213 ~~~d~vid~~G 223 (255)
+.+|++|++.|
T Consensus 86 g~id~lv~nAg 96 (260)
T PRK08416 86 DRVDFFISNAI 96 (260)
T ss_pred CCccEEEECcc
Confidence 46899999987
No 373
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.65 E-value=0.061 Score=44.49 Aligned_cols=35 Identities=26% Similarity=0.155 Sum_probs=28.0
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHhcCCcEEEEecC
Q 025278 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSS 185 (255)
Q Consensus 150 ~g~~VlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (255)
.+++++|+||+ +++|.+.+..+.. .|++|++..++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~-~G~~v~~~~~~ 41 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHA-AGAELGITYLP 41 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHH-CCCEEEEEecC
Confidence 47899999975 7999998877776 49999877543
No 374
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.035 Score=45.17 Aligned_cols=42 Identities=29% Similarity=0.434 Sum_probs=35.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (255)
.+++++|+|++|++|...++.+.. .|.+|+++++++++.+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~-~g~~V~~~~r~~~~~~~~ 46 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAA-AGATVILVARHQKKLEKV 46 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-cCCEEEEEeCChHHHHHH
Confidence 467999999999999998888887 499999999988776544
No 375
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.65 E-value=0.059 Score=46.23 Aligned_cols=75 Identities=20% Similarity=0.211 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEecChhhHHHH-HHcCC-C-EEE--cCCCc-cccccCCCccEEEECC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLL-RSLGA-D-LAI--DYTKE-NIEDLPEKFDVVFDAV 222 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~-~~~g~-~-~v~--~~~~~-~~~~~~~~~d~vid~~ 222 (255)
.|++|||+||+|.+|...+..+...+ +.+|+++++++.+...+ +.+.. . ..+ |..+. .+.+..+++|+||.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 46899999999999999888777642 26788888776554333 23321 1 122 22221 1222345799999998
Q ss_pred CC
Q 025278 223 GK 224 (255)
Q Consensus 223 G~ 224 (255)
|.
T Consensus 83 g~ 84 (324)
T TIGR03589 83 AL 84 (324)
T ss_pred cc
Confidence 84
No 376
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=95.64 E-value=0.015 Score=49.55 Aligned_cols=71 Identities=20% Similarity=0.288 Sum_probs=48.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEE-EcCCCc-cccccCCCccEEEECCCC
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-NIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~~~~~~d~vid~~G~ 224 (255)
+|+|+|++|.+|...++.+.. .|.+|+++++++++.....+.+...+ .|..+. ...+..+++|+||++++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~ 74 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLE-QGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAAD 74 (328)
T ss_pred eEEEECCccchhHHHHHHHHH-CCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEecee
Confidence 689999999999999988887 48999999988766543333343322 122221 223334578999998864
No 377
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.63 E-value=0.087 Score=46.14 Aligned_cols=75 Identities=17% Similarity=0.191 Sum_probs=46.9
Q ss_pred CCCCEEEEEcCCchHHHH--HHHHHHHhcCCcEEEEecChh--h--------------HHHHHHcCCC-EEEcCCCcccc
Q 025278 149 SAGKSILVLGGAGGVGTM--VIQLAKHVFGASKVAATSSTA--K--------------LDLLRSLGAD-LAIDYTKENIE 209 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~--a~~~a~~~~g~~vi~~~~~~~--~--------------~~~~~~~g~~-~v~~~~~~~~~ 209 (255)
..++++||+|+++++|++ .++.+ . .|++++++....+ + .+.+++.|.. ..++-+-.+.+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~-~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-G-AGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-H-cCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 557899999999999999 45555 5 4898888874221 1 2234556643 23332222211
Q ss_pred ----------ccCCCccEEEECCCCc
Q 025278 210 ----------DLPEKFDVVFDAVGKM 225 (255)
Q Consensus 210 ----------~~~~~~d~vid~~G~~ 225 (255)
+..+++|+++++.+..
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 1134799999999855
No 378
>PLN02686 cinnamoyl-CoA reductase
Probab=95.63 E-value=0.033 Score=48.73 Aligned_cols=46 Identities=20% Similarity=0.239 Sum_probs=36.5
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS 194 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~ 194 (255)
...+++|||+||+|.+|..++..+.. .|.+|+++.++.++.+.+++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~-~G~~V~~~~r~~~~~~~l~~ 95 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLR-HGYSVRIAVDTQEDKEKLRE 95 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHH
Confidence 35678999999999999999988887 49999888877665544433
No 379
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.59 E-value=0.072 Score=43.57 Aligned_cols=107 Identities=21% Similarity=0.199 Sum_probs=71.8
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCCCE--EEcCCCccccccCCCccE
Q 025278 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEKFDV 217 (255)
Q Consensus 144 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~~d~ 217 (255)
.....++|++||=.+ +|.|-.+..+++..+..+|+++|.+++-++.+++ .|... .+..+.++..-..+.+|+
T Consensus 45 ~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~ 122 (238)
T COG2226 45 SLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDA 122 (238)
T ss_pred HhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCE
Confidence 345566899999775 5679999999999767899999999998888754 22221 122233322222357899
Q ss_pred EEECCCC------ccceeeeeeccccCCceEEEEeeccCCCC
Q 025278 218 VFDAVGK------MCISIVYQKCDKFQEKSLINFGLFRQEVP 253 (255)
Q Consensus 218 vid~~G~------~~~~~~~~~~~~~~~G~~v~~G~~~~~~~ 253 (255)
|.-+-|- +.....+.+-++ ++|++++.-......+
T Consensus 123 vt~~fglrnv~d~~~aL~E~~RVlK-pgG~~~vle~~~p~~~ 163 (238)
T COG2226 123 VTISFGLRNVTDIDKALKEMYRVLK-PGGRLLVLEFSKPDNP 163 (238)
T ss_pred EEeeehhhcCCCHHHHHHHHHHhhc-CCeEEEEEEcCCCCch
Confidence 9887772 223333455666 8999999888766544
No 380
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.58 E-value=0.047 Score=46.51 Aligned_cols=73 Identities=18% Similarity=0.264 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH---HHc-CC--C-EEEcC--CC-ccccccCCCccEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSL-GA--D-LAIDY--TK-ENIEDLPEKFDVVF 219 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~---~~~-g~--~-~v~~~--~~-~~~~~~~~~~d~vi 219 (255)
.+++|||+||+|-+|...+..+.. .|.+|++++++.++.... ..+ +. . ..+.. .+ ..+....+++|+||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQ-RGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHH-CCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 367899999999999998888887 499999888776543222 111 11 1 12222 11 12333345799999
Q ss_pred ECCC
Q 025278 220 DAVG 223 (255)
Q Consensus 220 d~~G 223 (255)
.+++
T Consensus 82 h~A~ 85 (322)
T PLN02662 82 HTAS 85 (322)
T ss_pred EeCC
Confidence 9987
No 381
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=95.57 E-value=0.041 Score=52.07 Aligned_cols=76 Identities=17% Similarity=0.127 Sum_probs=49.3
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHc-CCCEEE-cCCCc-c-ccccCCCccEEEECCC
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GADLAI-DYTKE-N-IEDLPEKFDVVFDAVG 223 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-g~~~v~-~~~~~-~-~~~~~~~~d~vid~~G 223 (255)
.+++++|||+||+|-+|...++.+...++.+|+++++.+.+....... +...+. |-.+. . ..+..+++|+||.+++
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa 391 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVA 391 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECcc
Confidence 457789999999999999999877753478999999876543322111 222211 22221 1 1223458999999877
No 382
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.089 Score=42.75 Aligned_cols=74 Identities=18% Similarity=0.292 Sum_probs=46.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh-hHH----HHHHcCCC-EEEcCCCccccc----------cCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLD----LLRSLGAD-LAIDYTKENIED----------LPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~----~~~~~g~~-~v~~~~~~~~~~----------~~~ 213 (255)
++++++|+|++|++|...+..+.. .|.+++++.++.+ +.+ .+++.+.. ..+..+-.+..+ ..+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAA-DGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 568999999999999999888877 4888887765432 222 22333432 222222111111 124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
++|++|.++|.
T Consensus 83 ~id~vi~~ag~ 93 (245)
T PRK12937 83 RIDVLVNNAGV 93 (245)
T ss_pred CCCEEEECCCC
Confidence 78999999984
No 383
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.54 E-value=0.055 Score=46.13 Aligned_cols=70 Identities=19% Similarity=0.256 Sum_probs=51.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcC--CcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCcc
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~ 226 (255)
.+|.|+| +|.+|...+..++.. | .+|+++++++++.+.+++.|....+. .+..+..+..|+||.|+....
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~~-g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~~~~~~aDvViiavp~~~ 78 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRRL-GLAGEIVGADRSAETRARARELGLGDRVT---TSAAEAVKGADLVILCVPVGA 78 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhCCCCceec---CCHHHHhcCCCEEEECCCHHH
Confidence 5799999 999999988888764 6 37889999999988888887532211 112223457899999988543
No 384
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.54 E-value=0.045 Score=47.45 Aligned_cols=49 Identities=24% Similarity=0.299 Sum_probs=38.2
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh
Q 025278 138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (255)
Q Consensus 138 ta~~~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~ 187 (255)
|||.-++..-.-++++|+|+||+|-+|...+..+... |.+|+++++...
T Consensus 2 ~~~~~~~~~~~~~~~~vlVtGatGfiG~~lv~~L~~~-g~~V~~~d~~~~ 50 (348)
T PRK15181 2 TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFL-NQTVIGLDNFST 50 (348)
T ss_pred chhhhhhhcccccCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 5676665433345578999999999999999888884 899999987543
No 385
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.53 E-value=0.038 Score=44.12 Aligned_cols=34 Identities=24% Similarity=0.456 Sum_probs=26.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSS 185 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~ 185 (255)
...+|+|.| +|++|..+++.+..+ |. ++.++|.+
T Consensus 20 ~~~~VlviG-~GglGs~ia~~La~~-Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIG-AGGLGSPAALYLAGA-GVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEEC-CCHHHHHHHHHHHHc-CCCeEEEecCC
Confidence 346799999 999999988888876 64 67777755
No 386
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.52 E-value=0.093 Score=42.93 Aligned_cols=72 Identities=24% Similarity=0.296 Sum_probs=47.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-EE--cCCCcc-ccc-------cCCCcc
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTKEN-IED-------LPEKFD 216 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~-~~~-------~~~~~d 216 (255)
++++|+|++|++|...++.+.. .|++++.+.+++++.+.+ ++.+... .+ |-.+.. ..+ ....+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAK-DGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4799999999999998888877 499999998887655433 2334221 22 222211 111 123689
Q ss_pred EEEECCCC
Q 025278 217 VVFDAVGK 224 (255)
Q Consensus 217 ~vid~~G~ 224 (255)
++|.+.|.
T Consensus 80 ~vi~~ag~ 87 (254)
T TIGR02415 80 VMVNNAGV 87 (254)
T ss_pred EEEECCCc
Confidence 99999984
No 387
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.51 E-value=0.074 Score=45.23 Aligned_cols=74 Identities=24% Similarity=0.379 Sum_probs=46.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh-hhHHH----HHHcCCCEEE---cCCCcc-cccc------CCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDL----LRSLGADLAI---DYTKEN-IEDL------PEK 214 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~----~~~~g~~~v~---~~~~~~-~~~~------~~~ 214 (255)
.+++++|+|+++++|...+..+.. .|++|++.++++ ++.+. ++..|....+ |..+.. .... .+.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~-~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLAR-LGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 578999999999999998887777 499999887643 33322 2233433222 221111 1110 246
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|+++|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 388
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.51 E-value=0.25 Score=42.52 Aligned_cols=94 Identities=14% Similarity=0.124 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHH-HHc----CCCEEEcCCCccccccCCCccEEEECC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSL----GADLAIDYTKENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~-~~~----g~~~v~~~~~~~~~~~~~~~d~vid~~ 222 (255)
+..++++|+| +|..+.+.+..+....+ .++.+..++.+|.+.+ +++ |.+.. .. .+..+...+.|+|+.|+
T Consensus 127 ~~~~~v~iiG-aG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~-~~--~~~~~av~~aDiVvtaT 202 (326)
T TIGR02992 127 EDSSVVAIFG-AGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVT-AA--TDPRAAMSGADIIVTTT 202 (326)
T ss_pred CCCcEEEEEC-CCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEE-Ee--CCHHHHhccCCEEEEec
Confidence 4567899999 89999888777764346 4577888998886654 333 43221 11 22333346899999999
Q ss_pred CCccceeeeeeccccCCceEEEEeec
Q 025278 223 GKMCISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 223 G~~~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
++..-. .....++ ++-.+..+|..
T Consensus 203 ~s~~p~-i~~~~l~-~g~~i~~vg~~ 226 (326)
T TIGR02992 203 PSETPI-LHAEWLE-PGQHVTAMGSD 226 (326)
T ss_pred CCCCcE-ecHHHcC-CCcEEEeeCCC
Confidence 875532 2234554 44455567754
No 389
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.49 E-value=0.089 Score=43.44 Aligned_cols=74 Identities=24% Similarity=0.324 Sum_probs=47.0
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHhcCCcEEEEecCh--hhHHHH-HHcCCC-EE--EcCCCcc-cc-------ccCC
Q 025278 150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSST--AKLDLL-RSLGAD-LA--IDYTKEN-IE-------DLPE 213 (255)
Q Consensus 150 ~g~~VlI~ga--~g~~G~~a~~~a~~~~g~~vi~~~~~~--~~~~~~-~~~g~~-~v--~~~~~~~-~~-------~~~~ 213 (255)
.+++++|+|+ ++++|.+.++.+.. .|++|++++++. +..+.+ ++++.. .. .|-.+.. .. +..+
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~-~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQE-QGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHH-CCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 5689999998 79999998887776 499999887653 333333 344421 12 2222211 11 1124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|+++|.
T Consensus 85 ~iD~li~nAG~ 95 (256)
T PRK07889 85 GLDGVVHSIGF 95 (256)
T ss_pred CCcEEEEcccc
Confidence 79999999984
No 390
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.48 E-value=0.11 Score=43.64 Aligned_cols=94 Identities=21% Similarity=0.192 Sum_probs=61.0
Q ss_pred ccchhHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccc
Q 025278 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (255)
Q Consensus 131 ~l~~~~~ta~~~l~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 209 (255)
..|++....+..++..++ -.|++|+|+|-+.-+|.-.++++.. .++.|.+..+... ++.
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~-~~atVtv~hs~T~-------------------~l~ 197 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLL-AGCTVTVCHRFTK-------------------NLR 197 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHH-CCCeEEEEECCCC-------------------CHH
Confidence 346666556666665554 3699999999777799999999887 4888887765322 233
Q ss_pred ccCCCccEEEECCCCccceeeeeeccccCCceEEEEee
Q 025278 210 DLPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGL 247 (255)
Q Consensus 210 ~~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~ 247 (255)
+..+.+|++|.++|.+.... ..+.+ ++-.++-+|.
T Consensus 198 ~~~~~ADIvi~avG~p~~v~--~~~vk-~gavVIDvGi 232 (285)
T PRK10792 198 HHVRNADLLVVAVGKPGFIP--GEWIK-PGAIVIDVGI 232 (285)
T ss_pred HHHhhCCEEEEcCCCccccc--HHHcC-CCcEEEEccc
Confidence 33456677777777665322 34444 4555666663
No 391
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.47 E-value=0.11 Score=43.74 Aligned_cols=96 Identities=24% Similarity=0.284 Sum_probs=61.1
Q ss_pred ccchhHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccc
Q 025278 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (255)
Q Consensus 131 ~l~~~~~ta~~~l~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 209 (255)
..|++....+..++..++ -.|++|+|.|.+.-+|.-.+.++.. .+++|....... .+..
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~-~~atVt~~hs~t-------------------~~l~ 196 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQ-AGATVTICHSKT-------------------RDLA 196 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHH-CCCEEEEecCCC-------------------CCHH
Confidence 345555445555555443 4789999999777779999999987 488888754322 2233
Q ss_pred ccCCCccEEEECCCCccceeeeeeccccCCceEEEEeecc
Q 025278 210 DLPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 210 ~~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
+..+..|+|+-++|.+.... ..+++ ++..++.+|...
T Consensus 197 ~~~~~ADIVV~avG~~~~i~--~~~ik-~gavVIDVGin~ 233 (285)
T PRK14189 197 AHTRQADIVVAAVGKRNVLT--ADMVK-PGATVIDVGMNR 233 (285)
T ss_pred HHhhhCCEEEEcCCCcCccC--HHHcC-CCCEEEEccccc
Confidence 33456777777777655322 35554 556666677543
No 392
>PRK09186 flagellin modification protein A; Provisional
Probab=95.46 E-value=0.042 Score=45.03 Aligned_cols=42 Identities=29% Similarity=0.467 Sum_probs=35.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (255)
.+++++|+|++|++|...+..+.. .|.+++++.+++++.+.+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~ 44 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILE-AGGIVIAADIDKEALNEL 44 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEecChHHHHHH
Confidence 578999999999999998888887 499999999888776544
No 393
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.44 E-value=0.047 Score=44.64 Aligned_cols=44 Identities=23% Similarity=0.340 Sum_probs=36.8
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHH
Q 025278 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (255)
Q Consensus 147 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (255)
...++++++|+|++|++|...++.+.. .|++|++++++.++.+.
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~-~G~~Vi~~~r~~~~~~~ 51 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYAR-HGATVILLGRTEEKLEA 51 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHH-CCCcEEEEeCCHHHHHH
Confidence 345788999999999999998888877 48999999998776543
No 394
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.43 E-value=0.0051 Score=45.10 Aligned_cols=95 Identities=18% Similarity=0.174 Sum_probs=48.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEE-ecChh-hH--HHHHHcCCCEEEcCCCccccccCCCccEEEECCCCccce
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTA-KL--DLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMCIS 228 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~-~~--~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~~ 228 (255)
+|.|+|++|-+|...++.+....+.+++.. +++++ .. +...-.|....=-.-..+..+..+.+|++||++......
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT~p~~~~ 81 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFTNPDAVY 81 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES-HHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcCChHHhH
Confidence 689999779999999999998667777755 45441 11 111111111000000022333344588888888443333
Q ss_pred eeeeeccccCCceEEEEeecc
Q 025278 229 IVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 229 ~~~~~~~~~~~G~~v~~G~~~ 249 (255)
.....+. ..|.-+.+|..+
T Consensus 82 ~~~~~~~--~~g~~~ViGTTG 100 (124)
T PF01113_consen 82 DNLEYAL--KHGVPLVIGTTG 100 (124)
T ss_dssp HHHHHHH--HHT-EEEEE-SS
T ss_pred HHHHHHH--hCCCCEEEECCC
Confidence 3333333 246666666533
No 395
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=95.42 E-value=0.034 Score=46.03 Aligned_cols=70 Identities=20% Similarity=0.209 Sum_probs=48.5
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCC-CccEEEECCCCcccee
Q 025278 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPE-KFDVVFDAVGKMCISI 229 (255)
Q Consensus 154 VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~d~vid~~G~~~~~~ 229 (255)
|+|+|++|-+|...++.++. .|..|++++|++.+.+.-...... ..+.+.+... ++|+|||-+|.+-...
T Consensus 1 IliTGgTGlIG~~L~~~L~~-~gh~v~iltR~~~~~~~~~~~~v~-----~~~~~~~~~~~~~DavINLAG~~I~~r 71 (297)
T COG1090 1 ILITGGTGLIGRALTARLRK-GGHQVTILTRRPPKASQNLHPNVT-----LWEGLADALTLGIDAVINLAGEPIAER 71 (297)
T ss_pred CeEeccccchhHHHHHHHHh-CCCeEEEEEcCCcchhhhcCcccc-----ccchhhhcccCCCCEEEECCCCccccc
Confidence 58999999999999999988 599999999988766543221111 1111222222 7999999999665444
No 396
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.074 Score=50.13 Aligned_cols=73 Identities=23% Similarity=0.382 Sum_probs=49.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCCE-EE--cCCCcc-ccc-------cCCCc
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AI--DYTKEN-IED-------LPEKF 215 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~-~~~-------~~~~~ 215 (255)
+++++|+||+|++|...+..+.. .|.+|+++++++++.+.+. +.+... ++ |..+.. ..+ ..+.+
T Consensus 371 ~k~vlItGas~giG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 449 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAE-AGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV 449 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 67899999999999998887777 4999999999888765542 223221 22 222211 111 12368
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|++.|.
T Consensus 450 d~li~~Ag~ 458 (657)
T PRK07201 450 DYLVNNAGR 458 (657)
T ss_pred CEEEECCCC
Confidence 999999984
No 397
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.097 Score=44.15 Aligned_cols=37 Identities=30% Similarity=0.382 Sum_probs=31.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (255)
-.+++++|+||+|++|...+..+.. .|.+|+++.+++
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~-~G~~V~l~~r~~ 80 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAK-EGADIAIVYLDE 80 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCc
Confidence 3578999999999999998887777 499999888764
No 398
>PRK09135 pteridine reductase; Provisional
Probab=95.41 E-value=0.12 Score=42.10 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (255)
.+++++|+|++|.+|..++..+.. .|++|++++++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~-~g~~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHA-AGYRVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCC
Confidence 457899999999999998888877 499999998753
No 399
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.075 Score=43.52 Aligned_cols=40 Identities=25% Similarity=0.309 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEE-ecChhhHH
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLD 190 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~ 190 (255)
.+.+++|+|++|++|...++.+.. .|.++++. .++.++.+
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~-~G~~v~i~~~r~~~~~~ 45 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLAN-DGALVAIHYGRNKQAAD 45 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCCHHHHH
Confidence 357999999999999999988877 48888775 56665543
No 400
>PLN02214 cinnamoyl-CoA reductase
Probab=95.37 E-value=0.061 Score=46.54 Aligned_cols=75 Identities=20% Similarity=0.320 Sum_probs=48.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHH--HHHHcC---CC-EEE--cCCC-ccccccCCCccEEE
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD--LLRSLG---AD-LAI--DYTK-ENIEDLPEKFDVVF 219 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~--~~~~~g---~~-~v~--~~~~-~~~~~~~~~~d~vi 219 (255)
..+++|+|+||+|.+|...+..+.. .|.+|++++++.++.. .++.+. .. ..+ |..+ ..+.+..+++|+||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 86 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLE-RGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF 86 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-CcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence 3577999999999999998888877 4899999988765422 122221 11 122 2212 12233345899999
Q ss_pred ECCCC
Q 025278 220 DAVGK 224 (255)
Q Consensus 220 d~~G~ 224 (255)
.+++.
T Consensus 87 h~A~~ 91 (342)
T PLN02214 87 HTASP 91 (342)
T ss_pred EecCC
Confidence 99874
No 401
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.35 E-value=0.16 Score=42.86 Aligned_cols=61 Identities=23% Similarity=0.334 Sum_probs=50.1
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEe---cChhhHHHHHHcCCCEEEcCC
Q 025278 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT---SSTAKLDLLRSLGADLAIDYT 204 (255)
Q Consensus 142 ~l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~---~~~~~~~~~~~~g~~~v~~~~ 204 (255)
+.+...+++|. .+|-+.+|..|...+.+|+. +|.+++++. .+.+|++.++.+|+..+....
T Consensus 53 Ae~~G~l~pG~-tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 53 AEKRGLLKPGG-TIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHHcCCCCCCC-EEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 34566799999 55677799999999999998 599999885 488899999999998776554
No 402
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=95.35 E-value=0.07 Score=45.50 Aligned_cols=73 Identities=21% Similarity=0.299 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHH---HHHHcC-CC---EEEcCC---CccccccCCCccEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD---LLRSLG-AD---LAIDYT---KENIEDLPEKFDVVF 219 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~---~~~~~g-~~---~v~~~~---~~~~~~~~~~~d~vi 219 (255)
.+..|+|+||+|=+|...+..+.. +|.+|.+++|++++.+ .++++. +. .++..+ ...+.+..+|+|.||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~-rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLS-RGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHh-CCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence 678999999999999999999988 5999999999887633 355554 22 222221 122334456899999
Q ss_pred ECCC
Q 025278 220 DAVG 223 (255)
Q Consensus 220 d~~G 223 (255)
-++.
T Consensus 84 H~As 87 (327)
T KOG1502|consen 84 HTAS 87 (327)
T ss_pred EeCc
Confidence 8766
No 403
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.33 E-value=0.12 Score=41.83 Aligned_cols=37 Identities=30% Similarity=0.424 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~ 187 (255)
.+++++|+|++|++|...+..+.. .|++|+++.++++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~-~G~~v~~~~~~~~ 40 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAA-QGANVVINYASSE 40 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCch
Confidence 457899999999999999988887 4999977776544
No 404
>PRK09134 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.13 Score=42.33 Aligned_cols=74 Identities=19% Similarity=0.253 Sum_probs=46.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec-ChhhHHHH-H---HcCCCE-EE--cCCCcc-ccc-------cCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL-R---SLGADL-AI--DYTKEN-IED-------LPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~-~---~~g~~~-v~--~~~~~~-~~~-------~~~ 213 (255)
.+++++|+||+|++|...++.+.. .|.+++++.+ +.++.+.+ + +.+... .+ |..+.. ..+ ..+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAA-HGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467999999999999998887776 4888987765 34444322 2 224321 22 322211 111 124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
++|++|.+.|.
T Consensus 87 ~iD~vi~~ag~ 97 (258)
T PRK09134 87 PITLLVNNASL 97 (258)
T ss_pred CCCEEEECCcC
Confidence 68999999984
No 405
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.29 E-value=0.082 Score=42.33 Aligned_cols=72 Identities=24% Similarity=0.259 Sum_probs=45.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh-hHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKM 225 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~ 225 (255)
.|++|+|.| .|.+|..-++.+... |++|++++.+.. .++.+.+.|--..+.. +.. .....++|+||-++|.+
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~~-ga~VtVvsp~~~~~l~~l~~~~~i~~~~~-~~~-~~dl~~~~lVi~at~d~ 80 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLKA-GAQLRVIAEELESELTLLAEQGGITWLAR-CFD-ADILEGAFLVIAATDDE 80 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHC-CCEEEEEcCCCCHHHHHHHHcCCEEEEeC-CCC-HHHhCCcEEEEECCCCH
Confidence 467999999 899999988888884 999998876443 3333333331112211 111 11234677777777765
No 406
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.29 E-value=0.26 Score=39.46 Aligned_cols=98 Identities=15% Similarity=0.028 Sum_probs=59.0
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH----HcCCCE--EEcCCCccccccCCCcc
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFD 216 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~--v~~~~~~~~~~~~~~~d 216 (255)
+...+++++++||=.| +| .|..+..+++. ..+++.++.+++..+.++ +++.+. +...+........+.+|
T Consensus 71 ~~~l~~~~~~~VLeiG-~G-sG~~t~~la~~--~~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 146 (212)
T PRK00312 71 TELLELKPGDRVLEIG-TG-SGYQAAVLAHL--VRRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWPAYAPFD 146 (212)
T ss_pred HHhcCCCCCCEEEEEC-CC-ccHHHHHHHHH--hCEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCCcCCCcC
Confidence 3556788999999998 44 36666666665 358999999988776664 334322 22222111111124699
Q ss_pred EEEECCCCccceeeeeeccccCCceEEEE
Q 025278 217 VVFDAVGKMCISIVYQKCDKFQEKSLINF 245 (255)
Q Consensus 217 ~vid~~G~~~~~~~~~~~~~~~~G~~v~~ 245 (255)
+|+-..........+...++ ++|+++..
T Consensus 147 ~I~~~~~~~~~~~~l~~~L~-~gG~lv~~ 174 (212)
T PRK00312 147 RILVTAAAPEIPRALLEQLK-EGGILVAP 174 (212)
T ss_pred EEEEccCchhhhHHHHHhcC-CCcEEEEE
Confidence 98865544433444556666 78887653
No 407
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.28 E-value=0.15 Score=42.79 Aligned_cols=94 Identities=16% Similarity=0.224 Sum_probs=58.8
Q ss_pred ccchhHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccc
Q 025278 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (255)
Q Consensus 131 ~l~~~~~ta~~~l~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 209 (255)
..|++....+..++..++ -.|++|+|.|.+.-+|.-.+.++.. .++.|.+....... ..
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~-~~atVtv~hs~T~~-------------------l~ 202 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLN-RNATVSVCHVFTDD-------------------LK 202 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHH-CCCEEEEEeccCCC-------------------HH
Confidence 346665555556665554 4799999999777799999999987 48888777643222 22
Q ss_pred ccCCCccEEEECCCCccceeeeeeccccCCceEEEEee
Q 025278 210 DLPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGL 247 (255)
Q Consensus 210 ~~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~ 247 (255)
+..+.+|++|.++|.+... -..+.+ ++-.++-+|.
T Consensus 203 ~~~~~ADIvv~AvG~p~~i--~~~~vk-~gavVIDvGi 237 (287)
T PRK14176 203 KYTLDADILVVATGVKHLI--KADMVK-EGAVIFDVGI 237 (287)
T ss_pred HHHhhCCEEEEccCCcccc--CHHHcC-CCcEEEEecc
Confidence 2234566666666655432 233444 4455555655
No 408
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.26 E-value=0.038 Score=42.45 Aligned_cols=68 Identities=25% Similarity=0.288 Sum_probs=45.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCcc
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~ 226 (255)
.+|.++| .|.+|...+.-+... |.+|.+.++++++.+.+.+.|+..+ + +..+..+..|+||-|+....
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~g~~~~-~----s~~e~~~~~dvvi~~v~~~~ 69 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLAKA-GYEVTVYDRSPEKAEALAEAGAEVA-D----SPAEAAEQADVVILCVPDDD 69 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHT-TTEEEEEESSHHHHHHHHHTTEEEE-S----SHHHHHHHBSEEEE-SSSHH
T ss_pred CEEEEEc-hHHHHHHHHHHHHhc-CCeEEeeccchhhhhhhHHhhhhhh-h----hhhhHhhcccceEeecccch
Confidence 3688999 999999988877774 9999999999999998887775332 2 11222234566666666433
No 409
>PRK07574 formate dehydrogenase; Provisional
Probab=95.25 E-value=0.057 Score=47.47 Aligned_cols=67 Identities=19% Similarity=0.234 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G 223 (255)
.|++|.|+| .|.+|...++.++.. |.+|++.+++....+..+++|.... .++.+..+..|+|+-+..
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~f-G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell~~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKPF-DVKLHYTDRHRLPEEVEQELGLTYH-----VSFDSLVSVCDVVTIHCP 257 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCCCCchhhHhhcCceec-----CCHHHHhhcCCEEEEcCC
Confidence 578999999 999999999999985 9999999987644444445554211 123444567788888776
No 410
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.24 E-value=0.0087 Score=53.78 Aligned_cols=43 Identities=23% Similarity=0.425 Sum_probs=36.2
Q ss_pred HhcccCCCCEEE----EEcCCchHHHHHHHHHHHhcCCcEEEEecChh
Q 025278 144 ERSAFSAGKSIL----VLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (255)
Q Consensus 144 ~~~~~~~g~~Vl----I~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~ 187 (255)
...+.++|++++ |+||+|++|.+++|+++.+ |++|+.+...+.
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-g~~v~~~~~~~~ 73 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGL-GYDVVANNDGGL 73 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhC-CCeeeecCcccc
Confidence 356678889888 8888999999999999996 999998766554
No 411
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.062 Score=43.41 Aligned_cols=69 Identities=17% Similarity=0.308 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCC-EEEcCCCcc-cccc------CCCccEEEEC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKEN-IEDL------PEKFDVVFDA 221 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~-~~~~------~~~~d~vid~ 221 (255)
.+++++|+|++|++|...++.+.. .|.+|+++.++.++. +... ...|..+.. ..+. ..++|++|.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~-~G~~v~~~~r~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLAN-LGHQVIGIARSAIDD-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-CCCEEEEEeCCcccc-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 367899999999999998888877 499999998876541 1111 112322221 1111 1268999999
Q ss_pred CCC
Q 025278 222 VGK 224 (255)
Q Consensus 222 ~G~ 224 (255)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 884
No 412
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.21 E-value=0.059 Score=44.38 Aligned_cols=101 Identities=21% Similarity=0.242 Sum_probs=60.6
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEecChhhHHHHH----HcCCCE--EE-cCCC--cccc-cc
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADL--AI-DYTK--ENIE-DL 211 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~--v~-~~~~--~~~~-~~ 211 (255)
+....++||++|+=.| + |.|.++..+++..+ ..+|+..+.++++.+.++ .+|... .+ +.+- +.+. +.
T Consensus 33 ~~~l~i~pG~~VlEaG-t-GSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~ 110 (247)
T PF08704_consen 33 LMRLDIRPGSRVLEAG-T-GSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEEL 110 (247)
T ss_dssp HHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-
T ss_pred HHHcCCCCCCEEEEec-C-CcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccccc
Confidence 4577899999998776 4 44888888888763 368999999999888774 455431 12 2211 1121 11
Q ss_pred CCCccEEEECCC-Cccceeeeeecc-ccCCceEEEEe
Q 025278 212 PEKFDVVFDAVG-KMCISIVYQKCD-KFQEKSLINFG 246 (255)
Q Consensus 212 ~~~~d~vid~~G-~~~~~~~~~~~~-~~~~G~~v~~G 246 (255)
...+|.||==.. .......+.+.+ + ++|+++.|.
T Consensus 111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~-~gG~i~~fs 146 (247)
T PF08704_consen 111 ESDFDAVFLDLPDPWEAIPHAKRALKK-PGGRICCFS 146 (247)
T ss_dssp TTSEEEEEEESSSGGGGHHHHHHHE-E-EEEEEEEEE
T ss_pred cCcccEEEEeCCCHHHHHHHHHHHHhc-CCceEEEEC
Confidence 246898884444 444555556666 5 789998874
No 413
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.20 E-value=0.12 Score=43.37 Aligned_cols=94 Identities=21% Similarity=0.258 Sum_probs=57.5
Q ss_pred ccchhHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccc
Q 025278 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (255)
Q Consensus 131 ~l~~~~~ta~~~l~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 209 (255)
..|++....+..++..++ -.|++|+|.|.+..+|.-.+.++.. .++.|.+.......++
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~-~gAtVtv~hs~t~~l~------------------- 195 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLN-AGASVSVCHILTKDLS------------------- 195 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHH-CCCEEEEEeCCcHHHH-------------------
Confidence 346665555555555444 3699999999777999999999987 4898887754332221
Q ss_pred ccCCCccEEEECCCCccceeeeeeccccCCceEEEEee
Q 025278 210 DLPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGL 247 (255)
Q Consensus 210 ~~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~ 247 (255)
+..+..|+|+-++|.+... -..+.+ ++..++-+|.
T Consensus 196 ~~~~~ADIvV~AvG~p~~i--~~~~vk-~GavVIDvGi 230 (285)
T PRK14191 196 FYTQNADIVCVGVGKPDLI--KASMVK-KGAVVVDIGI 230 (285)
T ss_pred HHHHhCCEEEEecCCCCcC--CHHHcC-CCcEEEEeec
Confidence 2223456666666655432 133333 4455555554
No 414
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=95.19 E-value=0.13 Score=42.35 Aligned_cols=74 Identities=23% Similarity=0.306 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh-hhHHHH----HHcCCCE-E--EcCCCcc-ccc-------cCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLL----RSLGADL-A--IDYTKEN-IED-------LPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~----~~~g~~~-v--~~~~~~~-~~~-------~~~ 213 (255)
.+++++|+||+|++|...++.+.. .|++++++.++. ++.+.+ ++.+... . .|..+.. ..+ ...
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~-~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGK-EKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999988877 489888877643 333222 2334321 2 2332221 111 124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|.+.|.
T Consensus 85 ~id~lv~~ag~ 95 (261)
T PRK08936 85 TLDVMINNAGI 95 (261)
T ss_pred CCCEEEECCCC
Confidence 68999999984
No 415
>PLN03139 formate dehydrogenase; Provisional
Probab=95.18 E-value=0.049 Score=47.86 Aligned_cols=67 Identities=24% Similarity=0.374 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G 223 (255)
.|++|.|+| .|.+|...++.++.+ |.++++.+++..+.+..++.|+... .++.+.....|+|+-++.
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~af-G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~sDvV~l~lP 264 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKPF-NCNLLYHDRLKMDPELEKETGAKFE-----EDLDAMLPKCDVVVINTP 264 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHHC-CCEEEEECCCCcchhhHhhcCceec-----CCHHHHHhhCCEEEEeCC
Confidence 578999999 999999999999985 9999999887544444555554321 123444456788887766
No 416
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.17 E-value=0.018 Score=41.94 Aligned_cols=80 Identities=24% Similarity=0.230 Sum_probs=48.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh-hHHHHH-HcC-----CCEEEcCCCccccccCCCccEEEECCCCc
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLR-SLG-----ADLAIDYTKENIEDLPEKFDVVFDAVGKM 225 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~~-~~g-----~~~v~~~~~~~~~~~~~~~d~vid~~G~~ 225 (255)
+|.|.||+|-+|...++++......+++.+..++. .-+.+. .+. .+..+.. .+... ..++|+||.|++..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~Dvvf~a~~~~ 77 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEE-LSDVDVVFLALPHG 77 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHH-HTTESEEEE-SCHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhH-hhcCCEEEecCchh
Confidence 58999999999999999998866677776654433 222222 221 1222221 12222 26899999999976
Q ss_pred cceeeeeecc
Q 025278 226 CISIVYQKCD 235 (255)
Q Consensus 226 ~~~~~~~~~~ 235 (255)
.+........
T Consensus 78 ~~~~~~~~~~ 87 (121)
T PF01118_consen 78 ASKELAPKLL 87 (121)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6555554444
No 417
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.15 E-value=0.15 Score=41.34 Aligned_cols=72 Identities=25% Similarity=0.322 Sum_probs=45.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec-ChhhHHHH-HH---cCCC-EE--EcCCCcc-cc-------ccCCCc
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL-RS---LGAD-LA--IDYTKEN-IE-------DLPEKF 215 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~-~~---~g~~-~v--~~~~~~~-~~-------~~~~~~ 215 (255)
++++|+|++|++|...+..+.. .|++++++.+ ++++.+.. .+ .+.. .. .|..+.. .. +..+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAK-DGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999998888877 4899988877 44443322 22 2211 12 2222211 11 112468
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|.+.|.
T Consensus 80 d~vi~~ag~ 88 (242)
T TIGR01829 80 DVLVNNAGI 88 (242)
T ss_pred cEEEECCCC
Confidence 999999984
No 418
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=95.14 E-value=0.13 Score=43.77 Aligned_cols=64 Identities=27% Similarity=0.354 Sum_probs=53.0
Q ss_pred HHHHH----HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEe---cChhhHHHHHHcCCCEEEcC
Q 025278 139 AYEGL----ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT---SSTAKLDLLRSLGADLAIDY 203 (255)
Q Consensus 139 a~~~l----~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~---~~~~~~~~~~~~g~~~v~~~ 203 (255)
||..+ ....+.||.++||-.-+|..|...+.+++. .|.+++++. .+.||...++.+|+..+...
T Consensus 87 a~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~-~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp 157 (362)
T KOG1252|consen 87 AWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAAL-RGYKCIITMPEKMSKEKRILLRALGAEIILTP 157 (362)
T ss_pred HHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHH-cCceEEEEechhhhHHHHHHHHHcCCEEEecC
Confidence 55554 357799999999999999999999999988 599999885 46788889999999876543
No 419
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=95.14 E-value=0.063 Score=42.21 Aligned_cols=96 Identities=21% Similarity=0.199 Sum_probs=54.6
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHh-cCCcEEEEecChhhHHHHHHcCCCEE-EcCCCccc-c----cc-CCCccE
Q 025278 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSLGADLA-IDYTKENI-E----DL-PEKFDV 217 (255)
Q Consensus 146 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~-~----~~-~~~~d~ 217 (255)
..+++|++||.+| +|+-+. +..+++.. ...++++++.++++ +..+.+.+ .|..+.+. . .. .+++|+
T Consensus 28 ~~i~~g~~VLDiG-~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~ 101 (188)
T TIGR00438 28 KLIKPGDTVLDLG-AAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEVLNKIRERVGDDKVDV 101 (188)
T ss_pred cccCCCCEEEEec-CCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhHHHHHHHHhCCCCccE
Confidence 5578999999999 666554 44444443 24679999998764 11233322 12222111 0 11 246999
Q ss_pred EEE-C----CCC------------ccceeeeeeccccCCceEEEEeec
Q 025278 218 VFD-A----VGK------------MCISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 218 vid-~----~G~------------~~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
|+. . .|. ......+.+.++ ++|+++.....
T Consensus 102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lvi~~~~ 148 (188)
T TIGR00438 102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLK-PKGNFVVKVFQ 148 (188)
T ss_pred EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHcc-CCCEEEEEEcc
Confidence 995 3 222 122333456666 89999986543
No 420
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=95.13 E-value=0.055 Score=43.58 Aligned_cols=44 Identities=30% Similarity=0.448 Sum_probs=35.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHc
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL 195 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~ 195 (255)
|+++++.|++|++|+.....+.. .+.++.+++.+.|+.+...+|
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~-kgik~~~i~~~~En~~a~akL 48 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLE-KGIKVLVIDDSEENPEAIAKL 48 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHH-cCchheeehhhhhCHHHHHHH
Confidence 89999999999999998777776 599999998777776655444
No 421
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=95.13 E-value=0.044 Score=48.03 Aligned_cols=75 Identities=16% Similarity=0.144 Sum_probs=47.5
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEE-EcCCCc-cccccCCCccEEEECCC
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-NIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~~~~~~d~vid~~G 223 (255)
+..+++|+|+|++|-+|..++..+... |.+|+++++..........++...+ .|..+. .+.....++|+||.+++
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~-G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAE-GHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhC-CCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 346789999999999999999999884 8999999875432110011122211 122211 12223457899999986
No 422
>PLN02928 oxidoreductase family protein
Probab=95.11 E-value=0.06 Score=46.75 Aligned_cols=35 Identities=26% Similarity=0.462 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (255)
.|+++.|+| .|.+|..+++.++.+ |.+|++.+++.
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~af-G~~V~~~dr~~ 192 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLRPF-GVKLLATRRSW 192 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhC-CCEEEEECCCC
Confidence 578999999 999999999999985 99999998863
No 423
>PLN00198 anthocyanidin reductase; Provisional
Probab=95.11 E-value=0.093 Score=45.15 Aligned_cols=73 Identities=25% Similarity=0.354 Sum_probs=47.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH---HHc---CCCEEE--cCCCc-cccccCCCccEEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSL---GADLAI--DYTKE-NIEDLPEKFDVVFD 220 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~---~~~---g~~~v~--~~~~~-~~~~~~~~~d~vid 220 (255)
.+++|+|+||+|.+|...+..+... |.+|+++.++.++.... ..+ +.-.++ |-.+. ...+..+++|+||.
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQK-GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 4689999999999999999888874 88998887765443221 111 111222 22222 12233457899999
Q ss_pred CCC
Q 025278 221 AVG 223 (255)
Q Consensus 221 ~~G 223 (255)
+++
T Consensus 87 ~A~ 89 (338)
T PLN00198 87 VAT 89 (338)
T ss_pred eCC
Confidence 987
No 424
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.10 E-value=0.056 Score=44.18 Aligned_cols=73 Identities=27% Similarity=0.372 Sum_probs=49.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCCCE-E--EcCCCcc-c-------cccCCCc
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL-A--IDYTKEN-I-------EDLPEKF 215 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~-v--~~~~~~~-~-------~~~~~~~ 215 (255)
++++||+|++|.+|...+..+... |.+|+++++++++.+.+.+ .+... . .|..+.. + .+..+++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA-GANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 358999999999999998887774 8999999998877655432 23221 1 2322221 1 1113468
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|.+.|.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999998874
No 425
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.09 E-value=0.055 Score=46.88 Aligned_cols=74 Identities=20% Similarity=0.256 Sum_probs=47.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcC--CCE-EE--cCCCc-cccccCC--CccEEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLG--ADL-AI--DYTKE-NIEDLPE--KFDVVFD 220 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g--~~~-v~--~~~~~-~~~~~~~--~~d~vid 220 (255)
.+++|||+||+|.+|..++..+... |.+|+++++++...... +.++ ... .+ |-.+. .+.+..+ ++|+||.
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLEL-GAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHC-CCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 4689999999999999999888874 89999998766543222 2222 111 12 22211 1112122 5799999
Q ss_pred CCCC
Q 025278 221 AVGK 224 (255)
Q Consensus 221 ~~G~ 224 (255)
+++.
T Consensus 82 ~A~~ 85 (349)
T TIGR02622 82 LAAQ 85 (349)
T ss_pred CCcc
Confidence 9883
No 426
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.09 E-value=0.21 Score=37.38 Aligned_cols=54 Identities=26% Similarity=0.298 Sum_probs=39.1
Q ss_pred cchhHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh
Q 025278 132 LPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (255)
Q Consensus 132 l~~~~~ta~~~l~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (255)
+|+.....+..++..+ --.|++|+|+|.+..+|.-.+.++.. .++.|....+..
T Consensus 8 ~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~-~gatV~~~~~~t 62 (140)
T cd05212 8 VSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQR-DGATVYSCDWKT 62 (140)
T ss_pred cccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHH-CCCEEEEeCCCC
Confidence 4444443444454443 34789999999999999999999887 489888887543
No 427
>PRK07023 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.065 Score=43.67 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=30.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhh
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (255)
.+++|+|++|++|...++.+.. .|+++++++++.++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~-~G~~v~~~~r~~~~ 37 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQ-PGIAVLGVARSRHP 37 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHh-CCCEEEEEecCcch
Confidence 3699999999999998888877 49999999887654
No 428
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.06 E-value=0.12 Score=42.16 Aligned_cols=36 Identities=28% Similarity=0.379 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (255)
.+++++|+|++|++|...+..+.. .|.+|++++++.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~-~G~~v~~~~~~~ 42 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVE-AGAKVIGFDQAF 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEecch
Confidence 468999999999999998887777 499999998876
No 429
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=95.04 E-value=0.19 Score=45.70 Aligned_cols=70 Identities=14% Similarity=0.315 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCEEEcCCCccccccCCCccEEEECCCCc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGKM 225 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~ 225 (255)
.+++++|+| +|++|.+++..+... |+++++..+++++.+.+ ++++.. .++..+ ... ...+|+||+|+...
T Consensus 331 ~~k~vlIiG-aGgiG~aia~~L~~~-G~~V~i~~R~~~~~~~la~~~~~~-~~~~~~--~~~-l~~~DiVInatP~g 401 (477)
T PRK09310 331 NNQHVAIVG-AGGAAKAIATTLARA-GAELLIFNRTKAHAEALASRCQGK-AFPLES--LPE-LHRIDIIINCLPPS 401 (477)
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhccc-eechhH--hcc-cCCCCEEEEcCCCC
Confidence 567999999 799999998888874 88888888888877655 344322 222111 111 24789999998743
No 430
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=95.04 E-value=0.17 Score=40.87 Aligned_cols=74 Identities=18% Similarity=0.184 Sum_probs=47.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEE-ecCh----------hhHHHHHHcCCCEEEcC----CCccccccCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSST----------AKLDLLRSLGADLAIDY----TKENIEDLPE 213 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~----------~~~~~~~~~g~~~v~~~----~~~~~~~~~~ 213 (255)
-.|.+|+|.| .|.+|..+++.+... |.+++.+ |.+. +.++..++.+....+.. +.+.+. ..
T Consensus 21 l~g~~vaIqG-fGnVG~~~a~~L~~~-G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~l~--~~ 96 (217)
T cd05211 21 LEGLTVAVQG-LGNVGWGLAKKLAEE-GGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQDYFPGEAIL--GL 96 (217)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCccccCcccccCcccce--ec
Confidence 3688999999 999999999999996 7777755 5665 56666655542221111 001111 12
Q ss_pred CccEEEECCCCcc
Q 025278 214 KFDVVFDAVGKMC 226 (255)
Q Consensus 214 ~~d~vid~~G~~~ 226 (255)
.+|+++.|+....
T Consensus 97 ~~DVlipaA~~~~ 109 (217)
T cd05211 97 DVDIFAPCALGNV 109 (217)
T ss_pred cccEEeeccccCc
Confidence 6788888877543
No 431
>PRK07985 oxidoreductase; Provisional
Probab=95.04 E-value=0.13 Score=43.45 Aligned_cols=74 Identities=19% Similarity=0.223 Sum_probs=46.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh--hhHHHH----HHcCCCE-E--EcCCCcc-cc-------ccC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST--AKLDLL----RSLGADL-A--IDYTKEN-IE-------DLP 212 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~--~~~~~~----~~~g~~~-v--~~~~~~~-~~-------~~~ 212 (255)
.+++++|+||++++|...++.+.. .|++|+++.++. ++.+.+ ++.+... . .|..+.. .. +..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~-~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAR-EGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-CCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 567999999999999998888887 499998876532 233322 2334322 1 2222211 11 112
Q ss_pred CCccEEEECCCC
Q 025278 213 EKFDVVFDAVGK 224 (255)
Q Consensus 213 ~~~d~vid~~G~ 224 (255)
+++|+++.+.|.
T Consensus 127 g~id~lv~~Ag~ 138 (294)
T PRK07985 127 GGLDIMALVAGK 138 (294)
T ss_pred CCCCEEEECCCC
Confidence 468999999884
No 432
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.01 E-value=0.16 Score=41.60 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=29.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (255)
++++|+|++|++|...+..+.. .|+++++++++.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~-~g~~vi~~~r~~ 36 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAA-AGFDLAINDRPD 36 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHH-CCCEEEEEecCc
Confidence 5799999999999998888887 499999988754
No 433
>TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II. All of the members of the seed are characterized. See, for instance. This model is very solid, there are no species falling between trusted and noise at this time. The closest relatives scoring in the noise are the class I GAPDH's.
Probab=94.98 E-value=0.14 Score=44.12 Aligned_cols=97 Identities=24% Similarity=0.165 Sum_probs=60.1
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCcEEEE-ecChhhHHH-HHHcCCCEEEcCCC-------------ccccccCCCccEE
Q 025278 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDL-LRSLGADLAIDYTK-------------ENIEDLPEKFDVV 218 (255)
Q Consensus 154 VlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~-~~~~g~~~v~~~~~-------------~~~~~~~~~~d~v 218 (255)
|.|.| .|.+|...+..+......+++++ +.++++.+. ++.+|.+.+..... .++.+...++|+|
T Consensus 1 VaInG-~GrIGr~varav~~~~d~elVaVnD~~~~~~a~lA~~lgyds~~~~~~~~~~~~~~~l~v~g~~eeLl~~vDiV 79 (333)
T TIGR01546 1 VGVNG-YGTIGKRVADAVTKQDDMKLVGVTKTSPDFEAYRAKELGIPVYAASEEFIPRFEEAGIEVAGTLEDLLEKVDIV 79 (333)
T ss_pred CEEEC-CcHHHHHHHHHHhhCCCcEEEEEecCChHHHHHHHHHhCCCEEeecCCcceEeccCceEecCCHHHHhhcCCEE
Confidence 46888 99999988877665456788866 445554444 45677665431110 1223334589999
Q ss_pred EECCCCccceeeeeeccccCCceEEEEeeccCCC
Q 025278 219 FDAVGKMCISIVYQKCDKFQEKSLINFGLFRQEV 252 (255)
Q Consensus 219 id~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~~~ 252 (255)
++|+|............+ .+-+.++.|....++
T Consensus 80 ve~Tp~~~~~~na~~~~~-~GakaVl~~~p~~~~ 112 (333)
T TIGR01546 80 VDATPGGIGAKNKPLYEK-AGVKAIFQGGEKAEV 112 (333)
T ss_pred EECCCCCCChhhHHHHHh-CCcCEEEECCCCCCC
Confidence 999996665555444443 344567777776654
No 434
>PF00044 Gp_dh_N: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; InterPro: IPR020828 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an important role in glycolysis and gluconeogenesis [] by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate. The enzyme exists as a tetramer of identical subunits, each containing 2 conserved functional domains: an NAD-binding domain, and a highly conserved catalytic domain []. The enzyme has been found to bind to actin and tropomyosin, and may thus have a role in cytoskeleton assembly. Alternatively, the cytoskeleton may provide a framework for precise positioning of the glycolytic enzymes, thus permitting efficient passage of metabolites from enzyme to enzyme []. GAPDH displays diverse non-glycolytic functions as well, its role depending upon its subcellular location. For instance, the translocation of GAPDH to the nucleus acts as a signalling mechanism for programmed cell death, or apoptosis []. The accumulation of GAPDH within the nucleus is involved in the induction of apoptosis, where GAPDH functions in the activation of transcription. The presence of GAPDH is associated with the synthesis of pro-apoptotic proteins like BAX, c-JUN and GAPDH itself. GAPDH has been implicated in certain neurological diseases: GAPDH is able to bind to the gene products from neurodegenerative disorders such as Huntington's disease, Alzheimer's disease, Parkinson's disease and Machado-Joseph disease through stretches encoded by their CAG repeats. Abnormal neuronal apoptosis is associated with these diseases. Propargylamines such as deprenyl increase neuronal survival by interfering with apoptosis signalling pathways via their binding to GAPDH, which decreases the synthesis of pro-apoptotic proteins []. This entry represents the N-terminal domain which is a Rossmann NAD(P) binding fold.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 2G82_Q 1CER_R 1ZNQ_Q 3GPD_G 1U8F_R 3DOC_B 2YYY_A 1GPD_G 4GPD_1 2I5P_O ....
Probab=94.96 E-value=0.035 Score=42.10 Aligned_cols=97 Identities=16% Similarity=0.193 Sum_probs=58.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEE-ec--ChhhHHHHHHcC-------CCE-------EEcCCC------cccc
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAA-TS--STAKLDLLRSLG-------ADL-------AIDYTK------ENIE 209 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~--~~~~~~~~~~~g-------~~~-------v~~~~~------~~~~ 209 (255)
+|.|.| -|-+|..+...+......+++++ +. +.+.+..+.++. .+. +++... .+..
T Consensus 2 kVgING-fGRIGR~v~r~~~~~~~~evvaInd~~~~~~~~a~LlkyDs~~G~~~~~v~~~~~~l~v~G~~I~~~~~~dp~ 80 (151)
T PF00044_consen 2 KVGING-FGRIGRLVLRAALDQPDIEVVAINDPAPDPEYLAYLLKYDSVHGRFPGDVEVDDDGLIVNGKKIKVTEERDPE 80 (151)
T ss_dssp EEEEES-TSHHHHHHHHHHHTSTTEEEEEEEESSSSHHHHHHHHHEETTTESGSSHEEEETTEEEETTEEEEEEHTSSGG
T ss_pred EEEEEC-CCcccHHHHHhhcccceEEEEEEecccccchhhhhhhhccccccceecccccccceeEeecccccchhhhhhc
Confidence 588999 99999999999886556677766 33 345555554431 111 111110 0000
Q ss_pred cc---CCCccEEEECCCCccceeeeeeccccCCceEEEEeeccCC
Q 025278 210 DL---PEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQE 251 (255)
Q Consensus 210 ~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~~ 251 (255)
+. ..++|+|+||+|.......+..-+. .+-+=|+++.++..
T Consensus 81 ~i~W~~~gvDiVvEcTG~f~~~~~~~~hl~-~GakkViisap~~~ 124 (151)
T PF00044_consen 81 EIPWGELGVDIVVECTGKFRTRENAEAHLD-AGAKKVIISAPSKD 124 (151)
T ss_dssp GSTHHHHTESEEEETSSSTHSHHHHTHHHH-TTESEEEESSS-SS
T ss_pred ccccccccccEEEeccccceeccccccccc-ccccceeecccccc
Confidence 00 1289999999997765555544444 35667777777665
No 435
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.96 E-value=0.16 Score=42.04 Aligned_cols=99 Identities=19% Similarity=0.135 Sum_probs=62.5
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCC-EEEcCCCccccccCCCccEEEEC
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDA 221 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~d~vid~ 221 (255)
+....+.++++||=+| +| .|..+..+++...+.++++++.+++-++.+++.-.. .++..+...+. ....+|+|+-.
T Consensus 24 l~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~ 100 (258)
T PRK01683 24 LARVPLENPRYVVDLG-CG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASWQ-PPQALDLIFAN 100 (258)
T ss_pred HhhCCCcCCCEEEEEc-cc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhccC-CCCCccEEEEc
Confidence 3455677889999998 44 477788888775578999999999988888654221 22322222221 12479999865
Q ss_pred CCCc------cceeeeeeccccCCceEEEE
Q 025278 222 VGKM------CISIVYQKCDKFQEKSLINF 245 (255)
Q Consensus 222 ~G~~------~~~~~~~~~~~~~~G~~v~~ 245 (255)
..-. .....+.+.++ ++|+++..
T Consensus 101 ~~l~~~~d~~~~l~~~~~~Lk-pgG~~~~~ 129 (258)
T PRK01683 101 ASLQWLPDHLELFPRLVSLLA-PGGVLAVQ 129 (258)
T ss_pred cChhhCCCHHHHHHHHHHhcC-CCcEEEEE
Confidence 4311 22233345566 78988774
No 436
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.94 E-value=0.049 Score=47.08 Aligned_cols=77 Identities=25% Similarity=0.410 Sum_probs=47.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEecCh---------------------hhH----HHHHHcCCCEEEcC-
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSST---------------------AKL----DLLRSLGADLAIDY- 203 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~---------------------~~~----~~~~~~g~~~v~~~- 203 (255)
..+|+|.| +|++|..++..+..+ |. ++.++|.+. .|. +.+++++.+..+..
T Consensus 24 ~~~VlIiG-~GglGs~va~~La~a-Gvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~ 101 (338)
T PRK12475 24 EKHVLIVG-AGALGAANAEALVRA-GIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV 101 (338)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence 46799999 899999988888776 65 666677653 122 22344443322211
Q ss_pred ----CCccccccCCCccEEEECCCCcccee
Q 025278 204 ----TKENIEDLPEKFDVVFDAVGKMCISI 229 (255)
Q Consensus 204 ----~~~~~~~~~~~~d~vid~~G~~~~~~ 229 (255)
...+..+..+++|+||||+....+..
T Consensus 102 ~~~~~~~~~~~~~~~~DlVid~~D~~~~r~ 131 (338)
T PRK12475 102 VTDVTVEELEELVKEVDLIIDATDNFDTRL 131 (338)
T ss_pred eccCCHHHHHHHhcCCCEEEEcCCCHHHHH
Confidence 11233444568999999998665433
No 437
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=94.92 E-value=0.076 Score=45.33 Aligned_cols=72 Identities=17% Similarity=0.255 Sum_probs=54.2
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCccc
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMCI 227 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~ 227 (255)
.-.|++|.|+| .|.+|...++.++.. |.+|++.++.....+.++..|+.. . +..+..+..|+|+-++..+.+
T Consensus 13 ~LkgKtVGIIG-~GsIG~amA~nL~d~-G~~ViV~~r~~~s~~~A~~~G~~v-~-----sl~Eaak~ADVV~llLPd~~t 84 (335)
T PRK13403 13 LLQGKTVAVIG-YGSQGHAQAQNLRDS-GVEVVVGVRPGKSFEVAKADGFEV-M-----SVSEAVRTAQVVQMLLPDEQQ 84 (335)
T ss_pred hhCcCEEEEEe-EcHHHHHHHHHHHHC-cCEEEEEECcchhhHHHHHcCCEE-C-----CHHHHHhcCCEEEEeCCChHH
Confidence 34688999999 999999999999985 999998877655556667777632 1 344455678999988875433
No 438
>PRK07069 short chain dehydrogenase; Validated
Probab=94.89 E-value=0.12 Score=42.21 Aligned_cols=38 Identities=26% Similarity=0.430 Sum_probs=31.1
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCcEEEEecC-hhhHHHH
Q 025278 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDLL 192 (255)
Q Consensus 154 VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~-~~~~~~~ 192 (255)
++|+|++|++|...++.+.. .|++|++++++ .++++.+
T Consensus 2 ilVtG~~~~iG~~~a~~l~~-~G~~v~~~~r~~~~~~~~~ 40 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAE-QGAKVFLTDINDAAGLDAF 40 (251)
T ss_pred EEEECCCChHHHHHHHHHHH-CCCEEEEEeCCcchHHHHH
Confidence 79999999999998888877 49999999987 5555443
No 439
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=94.89 E-value=0.11 Score=45.94 Aligned_cols=97 Identities=20% Similarity=0.302 Sum_probs=62.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHH-HHHcCCCEEEcCCCccccccCCCccEEEECCCCcc
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDL-LRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~ 226 (255)
-.+.+|||+| +|-+|.+++..+... | .++++.-|+.+|.+. ++++|+..+ ..+ +..+....+|+||-++|.+.
T Consensus 176 L~~~~vlvIG-AGem~~lva~~L~~~-g~~~i~IaNRT~erA~~La~~~~~~~~-~l~--el~~~l~~~DvVissTsa~~ 250 (414)
T COG0373 176 LKDKKVLVIG-AGEMGELVAKHLAEK-GVKKITIANRTLERAEELAKKLGAEAV-ALE--ELLEALAEADVVISSTSAPH 250 (414)
T ss_pred cccCeEEEEc-ccHHHHHHHHHHHhC-CCCEEEEEcCCHHHHHHHHHHhCCeee-cHH--HHHHhhhhCCEEEEecCCCc
Confidence 4678999999 899999988888874 6 556666788887654 578995432 221 22233457999999999775
Q ss_pred ceeeeee---ccccCCc-eEEEEeeccC
Q 025278 227 ISIVYQK---CDKFQEK-SLINFGLFRQ 250 (255)
Q Consensus 227 ~~~~~~~---~~~~~~G-~~v~~G~~~~ 250 (255)
-...-.. .++.+.. .++-+++++.
T Consensus 251 ~ii~~~~ve~a~~~r~~~livDiavPRd 278 (414)
T COG0373 251 PIITREMVERALKIRKRLLIVDIAVPRD 278 (414)
T ss_pred cccCHHHHHHHHhcccCeEEEEecCCCC
Confidence 4333211 1111122 4677777765
No 440
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=94.88 E-value=0.29 Score=37.48 Aligned_cols=59 Identities=27% Similarity=0.261 Sum_probs=37.7
Q ss_pred hccchhHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhH
Q 025278 130 ASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL 189 (255)
Q Consensus 130 a~l~~~~~ta~~~l~~~~-~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~ 189 (255)
..+|++....+..++..+ --.|++|+|.|.+..+|.-.+.++.. .++.|.......+.+
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~-~~atVt~~h~~T~~l 73 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLN-KGATVTICHSKTKNL 73 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHH-TT-EEEEE-TTSSSH
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHh-CCCeEEeccCCCCcc
Confidence 344555555555565543 35789999999888999998888888 488888876654444
No 441
>PLN02650 dihydroflavonol-4-reductase
Probab=94.88 E-value=0.089 Score=45.57 Aligned_cols=73 Identities=21% Similarity=0.276 Sum_probs=47.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHc----CC--C-EEE--cCCCc-cccccCCCccEEE
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA--D-LAI--DYTKE-NIEDLPEKFDVVF 219 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~--~-~v~--~~~~~-~~~~~~~~~d~vi 219 (255)
..++|||+||+|-+|...+..+.. .|.+|++++++.++......+ +. . ..+ |..+. .+.+..+++|.||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLE-RGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHH-CCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 356899999999999998888887 499999988876554433221 11 1 112 22221 2233345789999
Q ss_pred ECCC
Q 025278 220 DAVG 223 (255)
Q Consensus 220 d~~G 223 (255)
.+.+
T Consensus 83 H~A~ 86 (351)
T PLN02650 83 HVAT 86 (351)
T ss_pred EeCC
Confidence 9886
No 442
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.87 E-value=0.09 Score=45.41 Aligned_cols=66 Identities=27% Similarity=0.322 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~ 224 (255)
.|++|.|+| .|.+|...++.++.. |.+|++.+++.+.. ..++.+... .++.+.....|+|+-++..
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~~-G~~V~~~d~~~~~~-~~~~~~~~~------~~l~ell~~aDiV~l~lP~ 214 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKGF-GMRILYYSRTRKPE-AEKELGAEY------RPLEELLRESDFVSLHVPL 214 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCChh-hHHHcCCEe------cCHHHHHhhCCEEEEeCCC
Confidence 578999999 999999999999985 99999998875443 233444321 1233444567888887763
No 443
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=94.86 E-value=0.11 Score=49.09 Aligned_cols=75 Identities=25% Similarity=0.427 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh---------------------hHHHHHHcCCCEEEcCCC--
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---------------------KLDLLRSLGADLAIDYTK-- 205 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~---------------------~~~~~~~~g~~~v~~~~~-- 205 (255)
..+++|+|+| +|+.|+.++..++.. |.+|++++.++. ..+.++++|.+..++..-
T Consensus 191 ~~~k~VaIIG-aGpAGl~aA~~La~~-G~~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~ 268 (652)
T PRK12814 191 KSGKKVAIIG-AGPAGLTAAYYLLRK-GHDVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGR 268 (652)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCcEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccC
Confidence 4578999999 899999999999884 999999986543 134556788766555421
Q ss_pred -ccccccCCCccEEEECCCCc
Q 025278 206 -ENIEDLPEKFDVVFDAVGKM 225 (255)
Q Consensus 206 -~~~~~~~~~~d~vid~~G~~ 225 (255)
.........+|.||-++|..
T Consensus 269 dv~~~~~~~~~DaVilAtGa~ 289 (652)
T PRK12814 269 DITLEELQKEFDAVLLAVGAQ 289 (652)
T ss_pred ccCHHHHHhhcCEEEEEcCCC
Confidence 11222223599999999965
No 444
>PRK12744 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.19 Score=41.34 Aligned_cols=34 Identities=32% Similarity=0.478 Sum_probs=28.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~ 184 (255)
.+++++|+|++|++|...+..+.. .|.+++++.+
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~-~G~~vv~i~~ 40 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAA-QGAKAVAIHY 40 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHH-CCCcEEEEec
Confidence 467999999999999999988877 4899777754
No 445
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=94.85 E-value=0.19 Score=41.64 Aligned_cols=38 Identities=21% Similarity=0.204 Sum_probs=30.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec-ChhhHH
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLD 190 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~ 190 (255)
.+++|+||++++|...++.+.. .|++|+++.+ ++++++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~-~G~~V~~~~~~~~~~~~ 40 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQ-EGYRVVLHYHRSAAAAS 40 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHh-CCCeEEEEcCCcHHHHH
Confidence 4789999999999998888877 4999998764 444443
No 446
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.85 E-value=0.21 Score=40.44 Aligned_cols=37 Identities=30% Similarity=0.373 Sum_probs=30.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~ 187 (255)
+.++++|+||+|.+|...+..+.. .|.+++++.++.+
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~-~g~~v~~~~~~~~ 41 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLAR-AGADVVVHYRSDE 41 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCeEEEEeCCCH
Confidence 356899999999999999988877 4888877665443
No 447
>PRK07041 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.14 Score=41.29 Aligned_cols=69 Identities=29% Similarity=0.394 Sum_probs=45.3
Q ss_pred EEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-Hc--CCC-EEE--cCCCcc-ccc---cCCCccEEEECCCC
Q 025278 155 LVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL--GAD-LAI--DYTKEN-IED---LPEKFDVVFDAVGK 224 (255)
Q Consensus 155 lI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~--g~~-~v~--~~~~~~-~~~---~~~~~d~vid~~G~ 224 (255)
+|+||+|++|...+..+.. .|.+++++++++++.+... ++ +.. +++ |..+.. ..+ ..+.+|++|.+.|.
T Consensus 1 lItGas~~iG~~~a~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~ 79 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAA-EGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAAD 79 (230)
T ss_pred CeecCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 5899999999998888877 4999999999877765542 22 221 222 222211 111 12468999999884
No 448
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.81 E-value=0.15 Score=45.88 Aligned_cols=71 Identities=28% Similarity=0.436 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh-hhH----HHHHHcCCCEEEcCCCccccccCCCccEEEECCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKL----DLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~----~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~ 224 (255)
.+++|+|+| .|.+|+.++..+.. .|++|++++.++ +.. +.+++.|..... .+..+ +..+++|+||.++|.
T Consensus 4 ~~k~v~iiG-~g~~G~~~A~~l~~-~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 4 KGKKVLVVG-AGVSGLALAKFLKK-LGAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPE--EFLEGVDLVVVSPGV 78 (450)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch--hHhhcCCEEEECCCC
Confidence 468999999 67799998888888 499999998864 222 333455654322 22111 223579999999984
Q ss_pred c
Q 025278 225 M 225 (255)
Q Consensus 225 ~ 225 (255)
.
T Consensus 79 ~ 79 (450)
T PRK14106 79 P 79 (450)
T ss_pred C
Confidence 3
No 449
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=94.80 E-value=0.1 Score=47.97 Aligned_cols=70 Identities=29% Similarity=0.388 Sum_probs=47.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HHcCCCEEEcCCCccccccCCCccEEEECCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G 223 (255)
.+++++|+| +|++|.+++..+... |++++++.++.+|.+.+ ++++.. .+...+.. .......|++++|++
T Consensus 378 ~~k~vlIlG-aGGagrAia~~L~~~-G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~~~-~~~~~~~diiINtT~ 448 (529)
T PLN02520 378 AGKLFVVIG-AGGAGKALAYGAKEK-GARVVIANRTYERAKELADAVGGQ-ALTLADLE-NFHPEEGMILANTTS 448 (529)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCc-eeeHhHhh-hhccccCeEEEeccc
Confidence 467899999 699999998888875 78988888988777665 455432 22221110 011235789998876
No 450
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=94.80 E-value=0.14 Score=45.94 Aligned_cols=72 Identities=19% Similarity=0.215 Sum_probs=45.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh-hHHHHHH-cCC--CEEEcCCCccccccCCCccEEEECCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRS-LGA--DLAIDYTKENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~~~-~g~--~~v~~~~~~~~~~~~~~~d~vid~~G 223 (255)
++..+|+|+||+|-+|...+..+.. .|.+|+++++... +.+.... .+. ...++.+. ......++|+||.+++
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~-~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di--~~~~~~~~D~ViHlAa 193 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIG-RGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDV--VEPILLEVDQIYHLAC 193 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHH-CCCEEEEEeCCCCccHhHhhhhccCCceEEEECcc--ccccccCCCEEEECce
Confidence 4567999999999999999998887 4899999986432 1111111 110 11222211 1112357999999987
No 451
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.79 E-value=0.2 Score=40.89 Aligned_cols=74 Identities=23% Similarity=0.365 Sum_probs=45.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec-ChhhHHHH-HHcCCC-EEE--cCCCcc-cccc-------CC-Cc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL-RSLGAD-LAI--DYTKEN-IEDL-------PE-KF 215 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~-~~~g~~-~v~--~~~~~~-~~~~-------~~-~~ 215 (255)
.+++++|+||+|++|...+..+.. .|++++...+ ++++.+.+ .+++.. .++ |..+.. ..+. .+ ++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~-~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAR-EGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI 82 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 357899999999999998887776 4899987654 44444433 334322 122 222211 1111 12 39
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|.+.|.
T Consensus 83 d~li~~ag~ 91 (253)
T PRK08642 83 TTVVNNALA 91 (253)
T ss_pred eEEEECCCc
Confidence 999999874
No 452
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=94.78 E-value=0.16 Score=41.18 Aligned_cols=72 Identities=19% Similarity=0.310 Sum_probs=45.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEE-ecChhhHHHH----HHcCCC-EEE--cCCCcc-ccc-------cCCCc
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL----RSLGAD-LAI--DYTKEN-IED-------LPEKF 215 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~----~~~g~~-~v~--~~~~~~-~~~-------~~~~~ 215 (255)
++++|+||+|++|...+..+.. .|.+|+++ .+++++.+.. ++.+.. ..+ |..+.. ..+ ...++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQ-EGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 4799999999999998888877 48888764 5665554332 233322 122 222221 111 12478
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|.++|.
T Consensus 81 d~vi~~ag~ 89 (247)
T PRK09730 81 AALVNNAGI 89 (247)
T ss_pred CEEEECCCC
Confidence 999999984
No 453
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=94.77 E-value=0.21 Score=35.70 Aligned_cols=75 Identities=20% Similarity=0.236 Sum_probs=54.2
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCcccc---c-cCCCccEEEECCCCcccee
Q 025278 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---D-LPEKFDVVFDAVGKMCISI 229 (255)
Q Consensus 154 VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~-~~~~~d~vid~~G~~~~~~ 229 (255)
|+|.| .|.+|...++.++. .+.++++++.++++.+.+++.|.. ++..+..+.. + ..+.++.++=+++......
T Consensus 1 vvI~G-~g~~~~~i~~~L~~-~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~ 77 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKE-GGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDEENL 77 (116)
T ss_dssp EEEES--SHHHHHHHHHHHH-TTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHHHHH
T ss_pred eEEEc-CCHHHHHHHHHHHh-CCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCCHHHHH
Confidence 57888 89999999999998 577999999999999999988854 4444333322 1 1347899998887654443
Q ss_pred ee
Q 025278 230 VY 231 (255)
Q Consensus 230 ~~ 231 (255)
..
T Consensus 78 ~~ 79 (116)
T PF02254_consen 78 LI 79 (116)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 454
>PLN02206 UDP-glucuronate decarboxylase
Probab=94.77 E-value=0.11 Score=46.67 Aligned_cols=71 Identities=18% Similarity=0.279 Sum_probs=45.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh-hHHHH-HHc---CCCEEEcCCCccccccCCCccEEEECCC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLL-RSL---GADLAIDYTKENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~-~~~---g~~~v~~~~~~~~~~~~~~~d~vid~~G 223 (255)
.++++|||+||+|-+|...++.+.. .|.+|+++++... +.+.. ..+ +.+ .++.+- ......++|+||.+++
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~-~G~~V~~ld~~~~~~~~~~~~~~~~~~~~-~i~~D~--~~~~l~~~D~ViHlAa 192 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMA-RGDSVIVVDNFFTGRKENVMHHFSNPNFE-LIRHDV--VEPILLEVDQIYHLAC 192 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHH-CcCEEEEEeCCCccchhhhhhhccCCceE-EEECCc--cChhhcCCCEEEEeee
Confidence 3568999999999999999998888 4999998875322 11111 111 121 122111 1122347899999987
No 455
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.76 E-value=0.083 Score=43.67 Aligned_cols=71 Identities=23% Similarity=0.218 Sum_probs=53.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEc-CCCc-cccccCCCccEEEECCCC
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID-YTKE-NIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~-~~~~-~~~~~~~~~d~vid~~G~ 224 (255)
.+|||+||+|.+|...++.+... +.+|.+..|++++..... .+.+.+.. ..+. .+....+|+|.++.+++.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~-~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~ 73 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR-GHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGL 73 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC-CCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecc
Confidence 36899999999999999999984 999999999999988877 55554432 2221 222334688888887773
No 456
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.75 E-value=0.072 Score=45.56 Aligned_cols=66 Identities=20% Similarity=0.223 Sum_probs=44.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~ 224 (255)
.|++|.|+| .|.+|...++.++.. |.+|++.+++.++.. +.+... ...++.+.....|+|+.+...
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~af-G~~V~~~~~~~~~~~-----~~~~~~--~~~~l~e~l~~aDvvv~~lPl 200 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQTW-GFPLRCWSRSRKSWP-----GVQSFA--GREELSAFLSQTRVLINLLPN 200 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCCCCCC-----Cceeec--ccccHHHHHhcCCEEEECCCC
Confidence 578999999 999999999999985 999999987654321 211111 112333444567777777663
No 457
>COG0057 GapA Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]
Probab=94.73 E-value=0.17 Score=43.12 Aligned_cols=101 Identities=17% Similarity=0.107 Sum_probs=60.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHhc-CCcEEEEe--cChhhHHHHHH-cCCCE-------------EEcCC--------C-c
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVF-GASKVAAT--SSTAKLDLLRS-LGADL-------------AIDYT--------K-E 206 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~--~~~~~~~~~~~-~g~~~-------------v~~~~--------~-~ 206 (255)
+|.|.| -|-+|..++..+.... ..+|+++. .+++.++.+.+ -+..- +++.. + .
T Consensus 3 kV~ING-fGrIGR~v~ra~~~~~~dieVVaInd~t~~~~~A~LlkyDs~hg~f~~~v~~~~~~~~v~g~~I~v~~~~~p~ 81 (335)
T COG0057 3 KVAING-FGRIGRLVARAALERDGDIEVVAINDLTDPDYLAHLLKYDSVHGRFDGEVEVKDDALVVNGKGIKVLAERDPA 81 (335)
T ss_pred EEEEec-CcHHHHHHHHHHHhCCCCeEEEEEecCCCHHHHHHHHhhcccCCCCCCcccccCCeEEECCceEEEEecCChH
Confidence 689999 9999999999998854 37777773 45565555532 21111 11111 0 0
Q ss_pred cccccCCCccEEEECCCCccceeeeeeccccCCceEEEEeeccCC-CCC
Q 025278 207 NIEDLPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLFRQE-VPK 254 (255)
Q Consensus 207 ~~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~~~~-~~~ 254 (255)
++.....++|+|+||+|.......+.+.+...+-+-|+++.++++ +++
T Consensus 82 ~l~w~d~gvdiVve~Tg~f~~~e~~~~hl~agGaKkV~isap~~~~~~~ 130 (335)
T COG0057 82 NLPWADLGVDIVVECTGKFTGREKAEKHLKAGGAKKVLISAPGKDDVAT 130 (335)
T ss_pred HCCccccCccEEEECCCCccchhhHHHHHHhcCCCEEEEcCCCCCCccE
Confidence 000011278999999997665555554444223577888887775 554
No 458
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.72 E-value=0.2 Score=42.43 Aligned_cols=55 Identities=22% Similarity=0.195 Sum_probs=40.1
Q ss_pred ccchhHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh
Q 025278 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (255)
Q Consensus 131 ~l~~~~~ta~~~l~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (255)
.+|++....+..++..++ -.|++|.|+|.++.+|.-.+.++.. .|+.|++..+..
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~-~gatVtv~~~~t 193 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQ-AHCSVTVVHSRS 193 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHH-CCCEEEEECCCC
Confidence 346665555555554443 5799999999667999998888887 499999886543
No 459
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=94.70 E-value=0.2 Score=40.87 Aligned_cols=72 Identities=22% Similarity=0.302 Sum_probs=44.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEe-cChhhHHHH----HHcCCCE-EE--cCCCcc-ccc-------cCCCc
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLL----RSLGADL-AI--DYTKEN-IED-------LPEKF 215 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~~~----~~~g~~~-v~--~~~~~~-~~~-------~~~~~ 215 (255)
++++|+|++|++|...++.+.. .|.+++++. +++++.+.+ +..+... .+ |..+.. ..+ ..+.+
T Consensus 3 k~ilItGas~giG~~la~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAA-RGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 5899999999999998888877 488887764 455544332 2233222 22 222211 111 12468
Q ss_pred cEEEECCCC
Q 025278 216 DVVFDAVGK 224 (255)
Q Consensus 216 d~vid~~G~ 224 (255)
|++|.++|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06947 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCcc
Confidence 999999983
No 460
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=94.69 E-value=0.23 Score=40.40 Aligned_cols=74 Identities=28% Similarity=0.397 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec-ChhhHHHH----HHcCCCE-EEcCCCccccc----------cCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADL-AIDYTKENIED----------LPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~----------~~~ 213 (255)
.+++++|+|++|++|...+..+.. .|.+++++.+ ++++.+.. ++.+.+. .+..+-.+..+ ..+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~-~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQ-EGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-cCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999998887777 4898887644 44443322 2333222 22222111111 013
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|.++|.
T Consensus 84 ~id~vi~~ag~ 94 (247)
T PRK12935 84 KVDILVNNAGI 94 (247)
T ss_pred CCCEEEECCCC
Confidence 58999999884
No 461
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.69 E-value=0.22 Score=40.63 Aligned_cols=74 Identities=18% Similarity=0.360 Sum_probs=44.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecC-hhhHH----HHHHcCCC-EEE--cCCCcc-cc-------ccCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLD----LLRSLGAD-LAI--DYTKEN-IE-------DLPE 213 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~-~~~~~----~~~~~g~~-~v~--~~~~~~-~~-------~~~~ 213 (255)
.+++++|+||+|.+|...+.-+.. .|.+++...++ .++.. .+++.+.. ..+ |..+.. .. +...
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAK-EGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 367999999999999998877666 48888776643 23222 22334432 122 222211 11 1124
Q ss_pred CccEEEECCCC
Q 025278 214 KFDVVFDAVGK 224 (255)
Q Consensus 214 ~~d~vid~~G~ 224 (255)
.+|++|.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (252)
T PRK06077 84 VADILVNNAGL 94 (252)
T ss_pred CCCEEEECCCC
Confidence 78999999984
No 462
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=94.67 E-value=0.16 Score=43.95 Aligned_cols=93 Identities=22% Similarity=0.089 Sum_probs=55.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEEe-cChhhHHH-HHHcCCCEE---------EcCCC----ccccccCCCccE
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDL-LRSLGADLA---------IDYTK----ENIEDLPEKFDV 217 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~~-~~~~g~~~v---------~~~~~----~~~~~~~~~~d~ 217 (255)
+|.|.| .|.+|...++.+......+++++. .++++.+. +++.|.+.. +.... .+..+...++|+
T Consensus 3 kVaI~G-~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~vDV 81 (341)
T PRK04207 3 KVGVNG-YGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKADI 81 (341)
T ss_pred EEEEEC-CCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccCCE
Confidence 689999 599999988887765577888764 34444443 344553310 00000 112222357999
Q ss_pred EEECCCCccceeeeeeccccCCceEEEEeec
Q 025278 218 VFDAVGKMCISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 218 vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
||||++............+ .|.-+.+...
T Consensus 82 VIdaT~~~~~~e~a~~~~~--aGk~VI~~~~ 110 (341)
T PRK04207 82 VVDATPGGVGAKNKELYEK--AGVKAIFQGG 110 (341)
T ss_pred EEECCCchhhHHHHHHHHH--CCCEEEEcCC
Confidence 9999997766665555554 3554444443
No 463
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.66 E-value=0.093 Score=44.87 Aligned_cols=43 Identities=26% Similarity=0.260 Sum_probs=37.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (255)
-.|.+++|+|+++++|...+..+.. .|++|+...|+.++.+.+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~-~Ga~Vv~~~R~~~~~~~~ 75 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELAL-RGAHVVLACRNEERGEEA 75 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHh-CCCEEEEEeCCHHHHHHH
Confidence 4568999999999999998888877 489999999998777665
No 464
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.65 E-value=0.042 Score=46.41 Aligned_cols=40 Identities=18% Similarity=0.275 Sum_probs=33.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~ 193 (255)
++|.|+| +|.+|...++.+... |.+|++.++++++++.+.
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la~~-G~~V~~~d~~~~~~~~~~ 41 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFAVS-GFQTTLVDIKQEQLESAQ 41 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhC-CCcEEEEeCCHHHHHHHH
Confidence 4789999 899999988877764 999999999998877653
No 465
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.63 E-value=0.25 Score=39.96 Aligned_cols=42 Identities=24% Similarity=0.314 Sum_probs=34.4
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH
Q 025278 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (255)
Q Consensus 147 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (255)
.+.++.+||+.| + |.|.-+..+|.. |.+|++++.++..++.+
T Consensus 34 ~~~~~~rvL~~g-C-G~G~da~~LA~~--G~~V~avD~s~~Ai~~~ 75 (218)
T PRK13255 34 ALPAGSRVLVPL-C-GKSLDMLWLAEQ--GHEVLGVELSELAVEQF 75 (218)
T ss_pred CCCCCCeEEEeC-C-CChHhHHHHHhC--CCeEEEEccCHHHHHHH
Confidence 445678999998 4 568999989873 99999999999887765
No 466
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=94.61 E-value=0.39 Score=38.81 Aligned_cols=103 Identities=21% Similarity=0.123 Sum_probs=61.4
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEecChhhHHHHHHcCC-------CEEEcCCCccccccCCCc
Q 025278 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLGA-------DLAIDYTKENIEDLPEKF 215 (255)
Q Consensus 144 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~g~-------~~v~~~~~~~~~~~~~~~ 215 (255)
......++.+|+-+| +|. |..+..+++... ..++++++.+++..+.+++.-. -.++..+..+.....+.+
T Consensus 45 ~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 122 (239)
T PRK00216 45 KWLGVRPGDKVLDLA-CGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDAEALPFPDNSF 122 (239)
T ss_pred HHhCCCCCCeEEEeC-CCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecccccCCCCCCCc
Confidence 344556788999998 666 888888888742 3899999999988877765311 111221111111112468
Q ss_pred cEEEECCCC------ccceeeeeeccccCCceEEEEeecc
Q 025278 216 DVVFDAVGK------MCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 216 d~vid~~G~------~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
|+|+-..+- ......+...++ ++|+++++....
T Consensus 123 D~I~~~~~l~~~~~~~~~l~~~~~~L~-~gG~li~~~~~~ 161 (239)
T PRK00216 123 DAVTIAFGLRNVPDIDKALREMYRVLK-PGGRLVILEFSK 161 (239)
T ss_pred cEEEEecccccCCCHHHHHHHHHHhcc-CCcEEEEEEecC
Confidence 998753221 111223345566 789988876543
No 467
>PLN03075 nicotianamine synthase; Provisional
Probab=94.58 E-value=0.12 Score=43.66 Aligned_cols=95 Identities=20% Similarity=0.126 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHh-cCCcEEEEecChhhHHHHHHcC-C----CE--EEc-CCCccccccCCCccEEE
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSLG-A----DL--AID-YTKENIEDLPEKFDVVF 219 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~~g-~----~~--v~~-~~~~~~~~~~~~~d~vi 219 (255)
.+.++|+-+| +|+.++.++.+++.+ .+.+++.+|.+++..+.+++.- . .. .+. .+..+.....+++|+||
T Consensus 122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF 200 (296)
T PLN03075 122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF 200 (296)
T ss_pred CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence 4779999999 999999888777543 4668999999999888876532 1 11 111 11111111235799999
Q ss_pred ECCC-------CccceeeeeeccccCCceEEEE
Q 025278 220 DAVG-------KMCISIVYQKCDKFQEKSLINF 245 (255)
Q Consensus 220 d~~G-------~~~~~~~~~~~~~~~~G~~v~~ 245 (255)
-.+= .........+.++ ++|.++.=
T Consensus 201 ~~ALi~~dk~~k~~vL~~l~~~Lk-PGG~Lvlr 232 (296)
T PLN03075 201 LAALVGMDKEEKVKVIEHLGKHMA-PGALLMLR 232 (296)
T ss_pred EecccccccccHHHHHHHHHHhcC-CCcEEEEe
Confidence 7631 1122233355565 66665543
No 468
>PRK13984 putative oxidoreductase; Provisional
Probab=94.58 E-value=0.13 Score=48.19 Aligned_cols=76 Identities=21% Similarity=0.344 Sum_probs=54.2
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh---------------------hhHHHHHHcCCCEEEcCCC-
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST---------------------AKLDLLRSLGADLAIDYTK- 205 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~---------------------~~~~~~~~~g~~~v~~~~~- 205 (255)
.+++++|+|+| +|..|+.++..++.. |.+++++++.+ ...+.++++|.+..++..-
T Consensus 280 ~~~~~~v~IIG-aG~aGl~aA~~L~~~-G~~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 357 (604)
T PRK13984 280 EKKNKKVAIVG-SGPAGLSAAYFLATM-GYEVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVG 357 (604)
T ss_pred ccCCCeEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeC
Confidence 45788999999 899999999999985 99998887543 1235567788776555321
Q ss_pred --ccccccCCCccEEEECCCCc
Q 025278 206 --ENIEDLPEKFDVVFDAVGKM 225 (255)
Q Consensus 206 --~~~~~~~~~~d~vid~~G~~ 225 (255)
.........+|.+|-++|..
T Consensus 358 ~~~~~~~~~~~yD~vilAtGa~ 379 (604)
T PRK13984 358 KDIPLEELREKHDAVFLSTGFT 379 (604)
T ss_pred CcCCHHHHHhcCCEEEEEcCcC
Confidence 11122234799999999953
No 469
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.58 E-value=0.16 Score=42.58 Aligned_cols=68 Identities=15% Similarity=0.117 Sum_probs=48.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCcc
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMC 226 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~ 226 (255)
+|.|+| .|.+|...+..++.. |.+|++.++++++.+.+.+.|...... .+. +.....|+||.|+....
T Consensus 2 ~I~IIG-~G~mG~sla~~L~~~-g~~V~~~d~~~~~~~~a~~~g~~~~~~---~~~-~~~~~aDlVilavp~~~ 69 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLRSL-GHTVYGVSRRESTCERAIERGLVDEAS---TDL-SLLKDCDLVILALPIGL 69 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCCccccc---CCH-hHhcCCCEEEEcCCHHH
Confidence 588999 999999888777764 889999999999988888777421111 111 12356788888877443
No 470
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.57 E-value=0.42 Score=42.76 Aligned_cols=78 Identities=21% Similarity=0.156 Sum_probs=48.5
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH----HHcCCCE-E--EcCCCccccc--cCCC
Q 025278 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-A--IDYTKENIED--LPEK 214 (255)
Q Consensus 144 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~--~~~~ 214 (255)
....+++|++|+=.| +| .|..+.++++.++..++++++.++++++.+ +++|.+. + .+.+...... ....
T Consensus 232 ~~L~~~~g~~VLDlc-ag-~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~~~~~~~ 309 (426)
T TIGR00563 232 TWLAPQNEETILDAC-AA-PGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQWAENEQ 309 (426)
T ss_pred HHhCCCCCCeEEEeC-CC-ccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccccccccc
Confidence 445678899998777 43 366666677665457899999999998766 3456542 2 2222211111 1246
Q ss_pred ccEEEE---CCC
Q 025278 215 FDVVFD---AVG 223 (255)
Q Consensus 215 ~d~vid---~~G 223 (255)
+|.||- |+|
T Consensus 310 fD~VllDaPcSg 321 (426)
T TIGR00563 310 FDRILLDAPCSA 321 (426)
T ss_pred cCEEEEcCCCCC
Confidence 999883 555
No 471
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.55 E-value=0.31 Score=38.21 Aligned_cols=98 Identities=19% Similarity=0.168 Sum_probs=60.0
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCCC--EEEcCCCccccccCCCccE
Q 025278 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFDV 217 (255)
Q Consensus 144 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~d~ 217 (255)
....+.++++||=.| +|. |..+..+++.....++++++.+++.++.+++ ++.. .++..+.. ....+.+|+
T Consensus 25 ~~l~~~~~~~vLDiG-~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~~--~~~~~~~D~ 100 (187)
T PRK08287 25 SKLELHRAKHLIDVG-AGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEAP--IELPGKADA 100 (187)
T ss_pred HhcCCCCCCEEEEEC-CcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCch--hhcCcCCCE
Confidence 455667888999888 444 7777777776445799999999987777643 3322 22222211 122347999
Q ss_pred EEECCCCc---cceeeeeeccccCCceEEEEe
Q 025278 218 VFDAVGKM---CISIVYQKCDKFQEKSLINFG 246 (255)
Q Consensus 218 vid~~G~~---~~~~~~~~~~~~~~G~~v~~G 246 (255)
|+...... .....+.+.++ ++|+++...
T Consensus 101 v~~~~~~~~~~~~l~~~~~~Lk-~gG~lv~~~ 131 (187)
T PRK08287 101 IFIGGSGGNLTAIIDWSLAHLH-PGGRLVLTF 131 (187)
T ss_pred EEECCCccCHHHHHHHHHHhcC-CCeEEEEEE
Confidence 98543211 12233456666 789887643
No 472
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.55 E-value=0.15 Score=43.06 Aligned_cols=49 Identities=27% Similarity=0.316 Sum_probs=41.5
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH-HcC
Q 025278 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG 196 (255)
Q Consensus 147 ~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g 196 (255)
+.++-..++|+|++.++|++.+..++. .|+.|..+.++.+|+..++ +++
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~-~ga~Vti~ar~~~kl~~a~~~l~ 78 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKR-EGADVTITARSGKKLLEAKAELE 78 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHH-ccCceEEEeccHHHHHHHHhhhh
Confidence 344557899999999999999999998 4999999999999998874 444
No 473
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.55 E-value=0.32 Score=40.16 Aligned_cols=98 Identities=19% Similarity=0.150 Sum_probs=65.1
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECC
Q 025278 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 143 l~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~ 222 (255)
+......++++||=+| +|. |..+..+++...+.+++.++.+++-++.+++.+.+.+ ..+..++. ....+|+|+-..
T Consensus 22 l~~l~~~~~~~vLDlG-cG~-G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~-~~d~~~~~-~~~~fD~v~~~~ 97 (255)
T PRK14103 22 LARVGAERARRVVDLG-CGP-GNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDAR-TGDVRDWK-PKPDTDVVVSNA 97 (255)
T ss_pred HHhCCCCCCCEEEEEc-CCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEE-EcChhhCC-CCCCceEEEEeh
Confidence 4455667889999998 554 7788888876446899999999998888887665433 22222221 134799999754
Q ss_pred CC------ccceeeeeeccccCCceEEEE
Q 025278 223 GK------MCISIVYQKCDKFQEKSLINF 245 (255)
Q Consensus 223 G~------~~~~~~~~~~~~~~~G~~v~~ 245 (255)
.- ......+.+.++ ++|++++.
T Consensus 98 ~l~~~~d~~~~l~~~~~~Lk-pgG~l~~~ 125 (255)
T PRK14103 98 ALQWVPEHADLLVRWVDELA-PGSWIAVQ 125 (255)
T ss_pred hhhhCCCHHHHHHHHHHhCC-CCcEEEEE
Confidence 31 122233455566 88998764
No 474
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.48 E-value=0.26 Score=41.73 Aligned_cols=94 Identities=20% Similarity=0.202 Sum_probs=58.8
Q ss_pred ccchhHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEe-cChhhHHHHHHcCCCEEEcCCCccc
Q 025278 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENI 208 (255)
Q Consensus 131 ~l~~~~~ta~~~l~~~~~-~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~~~~~~g~~~v~~~~~~~~ 208 (255)
.+|++....+..++...+ -.|++|+|+|-++.+|.-.+..+.. .|+.|.+.. ++.+ .
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~-~g~tVtv~~~rT~~--------------------l 195 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLA-ANATVTIAHSRTRD--------------------L 195 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHh-CCCEEEEECCCCCC--------------------H
Confidence 346665555555554443 5799999999999999998888887 489898884 4431 1
Q ss_pred cccCCCccEEEECCCCccceeeeeeccccCCceEEEEeec
Q 025278 209 EDLPEKFDVVFDAVGKMCISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 209 ~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
.+..+..|+||-++|.+..... .+++ ++..++.+|..
T Consensus 196 ~e~~~~ADIVIsavg~~~~v~~--~~lk-~GavVIDvGin 232 (296)
T PRK14188 196 PAVCRRADILVAAVGRPEMVKG--DWIK-PGATVIDVGIN 232 (296)
T ss_pred HHHHhcCCEEEEecCChhhcch--heec-CCCEEEEcCCc
Confidence 2223345667766665543222 2233 45556666654
No 475
>PRK08291 ectoine utilization protein EutC; Validated
Probab=94.48 E-value=0.74 Score=39.71 Aligned_cols=94 Identities=12% Similarity=0.079 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHH-HHc----CCCEEEcCCCccccccCCCccEEEECC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSL----GADLAIDYTKENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~-~~~----g~~~v~~~~~~~~~~~~~~~d~vid~~ 222 (255)
+..++++|+| +|+.|.+.+..+....+ .++.+..++++|.+.+ +++ |.. +... .+..+...+.|+|+.|+
T Consensus 130 ~~~~~v~IiG-aG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~--~d~~~al~~aDiVi~aT 205 (330)
T PRK08291 130 EDASRAAVIG-AGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVA--RDVHEAVAGADIIVTTT 205 (330)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEe--CCHHHHHccCCEEEEee
Confidence 4457899999 89999987766664334 5677778998887665 333 432 1111 12333345789999999
Q ss_pred CCccceeeeeeccccCCceEEEEeec
Q 025278 223 GKMCISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 223 G~~~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
.+..-... ...++ ++-.+..+|..
T Consensus 206 ~s~~p~i~-~~~l~-~g~~v~~vg~d 229 (330)
T PRK08291 206 PSEEPILK-AEWLH-PGLHVTAMGSD 229 (330)
T ss_pred CCCCcEec-HHHcC-CCceEEeeCCC
Confidence 86543222 22343 44456666653
No 476
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.47 E-value=0.059 Score=44.25 Aligned_cols=77 Identities=21% Similarity=0.327 Sum_probs=44.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh-------------------hH----HHHHHcCCCEEEcCCC--
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-------------------KL----DLLRSLGADLAIDYTK-- 205 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-------------------~~----~~~~~~g~~~v~~~~~-- 205 (255)
..+|+|.| +|++|..+++.+..++-.+++++|.+.- |. +.+++++.+.-+...+
T Consensus 24 ~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~ 102 (240)
T TIGR02355 24 ASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAK 102 (240)
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEecc
Confidence 36799999 9999999888888763345555553221 11 1223344222222111
Q ss_pred ---ccccccCCCccEEEECCCCccce
Q 025278 206 ---ENIEDLPEKFDVVFDAVGKMCIS 228 (255)
Q Consensus 206 ---~~~~~~~~~~d~vid~~G~~~~~ 228 (255)
++..+..+++|+||||+....+.
T Consensus 103 i~~~~~~~~~~~~DlVvd~~D~~~~r 128 (240)
T TIGR02355 103 LDDAELAALIAEHDIVVDCTDNVEVR 128 (240)
T ss_pred CCHHHHHHHhhcCCEEEEcCCCHHHH
Confidence 12223346899999999876543
No 477
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=94.47 E-value=0.092 Score=45.22 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChh
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~ 187 (255)
++++|||+||+|.+|...++.+... |.+|++++++++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~-G~~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSK-GYEVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHC-CCEEEEEecccc
Confidence 4678999999999999999988884 999999887543
No 478
>PRK06940 short chain dehydrogenase; Provisional
Probab=94.44 E-value=0.23 Score=41.41 Aligned_cols=71 Identities=17% Similarity=0.340 Sum_probs=45.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHH-HH---cCCCE-EE--cCCCcc-ccc------cCCCcc
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RS---LGADL-AI--DYTKEN-IED------LPEKFD 216 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~---~g~~~-v~--~~~~~~-~~~------~~~~~d 216 (255)
+++++|+|+ |++|...+..+. .|.+|+++++++++++.+ ++ .|.+. .+ |-.+.+ ... ..+++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~--~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG--AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 467899995 899999888874 389999999987766543 22 24221 22 322221 111 124699
Q ss_pred EEEECCCC
Q 025278 217 VVFDAVGK 224 (255)
Q Consensus 217 ~vid~~G~ 224 (255)
++|+++|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999984
No 479
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.44 E-value=0.071 Score=46.84 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=26.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (255)
...+|+|.| +|++|..++..+...+-.++.++|.+
T Consensus 134 ~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 456899999 89999988888777633466677765
No 480
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.44 E-value=0.26 Score=40.48 Aligned_cols=35 Identities=26% Similarity=0.242 Sum_probs=28.5
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHhcCCcEEEEecC
Q 025278 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSS 185 (255)
Q Consensus 150 ~g~~VlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (255)
.+++++|+||+ |++|...+..+.. .|++|+++.++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~-~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAA-KGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHH-cCCcEEEEcCC
Confidence 45789999987 4899998877776 48999998876
No 481
>PLN02244 tocopherol O-methyltransferase
Probab=94.43 E-value=0.45 Score=41.23 Aligned_cols=96 Identities=18% Similarity=0.109 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCCC---EEEcCCCccccccCCCccEEEEC
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFDVVFDA 221 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~d~vid~ 221 (255)
+++++||=+| +| .|..+..+++.. ++++++++.+++..+.+++ .|.. ..+..+..+..-..+.+|+|+-.
T Consensus 117 ~~~~~VLDiG-CG-~G~~~~~La~~~-g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~ 193 (340)
T PLN02244 117 KRPKRIVDVG-CG-IGGSSRYLARKY-GANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSM 193 (340)
T ss_pred CCCCeEEEec-CC-CCHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEEC
Confidence 7889999888 44 477888888874 8999999999987766643 2321 11222211111113479999864
Q ss_pred CCCc------cceeeeeeccccCCceEEEEeec
Q 025278 222 VGKM------CISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 222 ~G~~------~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
-... .....+.+.++ ++|++++....
T Consensus 194 ~~~~h~~d~~~~l~e~~rvLk-pGG~lvi~~~~ 225 (340)
T PLN02244 194 ESGEHMPDKRKFVQELARVAA-PGGRIIIVTWC 225 (340)
T ss_pred CchhccCCHHHHHHHHHHHcC-CCcEEEEEEec
Confidence 3311 12233456666 89999987653
No 482
>PRK06123 short chain dehydrogenase; Provisional
Probab=94.43 E-value=0.25 Score=40.19 Aligned_cols=73 Identities=19% Similarity=0.329 Sum_probs=44.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEe-cChhhHHHH----HHcCCCE-EE--cCCCcc-ccc-------cCCC
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLL----RSLGADL-AI--DYTKEN-IED-------LPEK 214 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~~~----~~~g~~~-v~--~~~~~~-~~~-------~~~~ 214 (255)
+++++|+|++|++|...++.+.. .|++++... +++++.+.. ++.+... .+ |..+.. ..+ ..+.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~-~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAE-RGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGR 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-CCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999998887776 488887765 444443322 3334322 22 222211 111 1236
Q ss_pred ccEEEECCCC
Q 025278 215 FDVVFDAVGK 224 (255)
Q Consensus 215 ~d~vid~~G~ 224 (255)
+|++|.+.|.
T Consensus 81 id~li~~ag~ 90 (248)
T PRK06123 81 LDALVNNAGI 90 (248)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 483
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.41 E-value=0.13 Score=41.66 Aligned_cols=71 Identities=18% Similarity=0.241 Sum_probs=44.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCE-EEcCCCc--cccccCCCccEEEECCCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTKE--NIEDLPEKFDVVFDAVGK 224 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~-v~~~~~~--~~~~~~~~~d~vid~~G~ 224 (255)
.+++++|+|++|++|...+..+.. .|++++++++++.... ...... ..|..+. ...+..+.+|++|++.|.
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~-~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLA-QGAQVYGVDKQDKPDL---SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHH-CCCEEEEEeCCccccc---CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence 467899999999999998887777 4899999887654321 001111 1121111 011113478999999884
No 484
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.41 E-value=0.061 Score=37.13 Aligned_cols=76 Identities=22% Similarity=0.273 Sum_probs=51.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcC---CcEEEE-ecChhhHHHH-HHcCCCEEEcCCCccccccCCCccEEEECCCCccc
Q 025278 153 SILVLGGAGGVGTMVIQLAKHVFG---ASKVAA-TSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMCI 227 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a~~~a~~~~g---~~vi~~-~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~ 227 (255)
++.++| +|.+|.+.+.-+... + .+++.+ .+++++.+.+ ++++..... . +..+..+..|+||-|+-....
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~-g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~---~~~~~~~~advvilav~p~~~ 74 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLAS-GIKPHEVIIVSSRSPEKAAELAKEYGVQATA-D---DNEEAAQEADVVILAVKPQQL 74 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHT-TS-GGEEEEEEESSHHHHHHHHHHCTTEEES-E---EHHHHHHHTSEEEE-S-GGGH
T ss_pred CEEEEC-CCHHHHHHHHHHHHC-CCCceeEEeeccCcHHHHHHHHHhhcccccc-C---ChHHhhccCCEEEEEECHHHH
Confidence 467888 999999988887774 7 788855 8999988876 566654332 1 122223468999999987766
Q ss_pred eeeeeec
Q 025278 228 SIVYQKC 234 (255)
Q Consensus 228 ~~~~~~~ 234 (255)
...+.+.
T Consensus 75 ~~v~~~i 81 (96)
T PF03807_consen 75 PEVLSEI 81 (96)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 485
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=94.38 E-value=0.28 Score=39.76 Aligned_cols=34 Identities=26% Similarity=0.285 Sum_probs=29.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecCh
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (255)
++++|+|++|++|..+++.+.. .|.+|+.+++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~-~g~~vi~~~r~~ 36 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLN-DGYRVIATYFSG 36 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHH-cCCEEEEEeCCc
Confidence 4799999999999998888877 489999998874
No 486
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.35 E-value=0.1 Score=44.81 Aligned_cols=65 Identities=23% Similarity=0.341 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCCCccccccCCCccEEEECCC
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G 223 (255)
.|+++.|+| .|.||++.++.++. .|.+++..++++. .+..++.++.++- +.+..+..|++.-.+.
T Consensus 145 ~gktvGIiG-~GrIG~avA~r~~~-Fgm~v~y~~~~~~-~~~~~~~~~~y~~------l~ell~~sDii~l~~P 209 (324)
T COG1052 145 RGKTLGIIG-LGRIGQAVARRLKG-FGMKVLYYDRSPN-PEAEKELGARYVD------LDELLAESDIISLHCP 209 (324)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhc-CCCEEEEECCCCC-hHHHhhcCceecc------HHHHHHhCCEEEEeCC
Confidence 489999999 99999999999997 5999999998865 3334444443321 3333445677665555
No 487
>PRK04457 spermidine synthase; Provisional
Probab=94.35 E-value=0.24 Score=41.24 Aligned_cols=93 Identities=13% Similarity=0.139 Sum_probs=58.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHc-CC----C--EEEcCCCccc-cccCCCccEEE-
Q 025278 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GA----D--LAIDYTKENI-EDLPEKFDVVF- 219 (255)
Q Consensus 149 ~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-g~----~--~v~~~~~~~~-~~~~~~~d~vi- 219 (255)
..+++||++| +|+ |.++..+++...+.++++++.+++-.+.+++. +. + .++..+...+ ....+.+|+|+
T Consensus 65 ~~~~~vL~IG-~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~ 142 (262)
T PRK04457 65 PRPQHILQIG-LGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILV 142 (262)
T ss_pred CCCCEEEEEC-CCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEE
Confidence 4567899999 554 88888888876678999999999999888753 31 1 2232222221 22234789988
Q ss_pred ECCCCc---------cceeeeeeccccCCceEEE
Q 025278 220 DAVGKM---------CISIVYQKCDKFQEKSLIN 244 (255)
Q Consensus 220 d~~G~~---------~~~~~~~~~~~~~~G~~v~ 244 (255)
|+-.+. .....+.+.++ ++|+++.
T Consensus 143 D~~~~~~~~~~l~t~efl~~~~~~L~-pgGvlvi 175 (262)
T PRK04457 143 DGFDGEGIIDALCTQPFFDDCRNALS-SDGIFVV 175 (262)
T ss_pred eCCCCCCCccccCcHHHHHHHHHhcC-CCcEEEE
Confidence 332211 22233445566 7898876
No 488
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.35 E-value=0.22 Score=44.75 Aligned_cols=72 Identities=22% Similarity=0.290 Sum_probs=47.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhh----HHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCc
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK----LDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKM 225 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~----~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~ 225 (255)
.+++++|+| .|++|++++.+++.. |++|++.+.+.+. .+.+++.|..........+. ..+++|+|+.+.|-+
T Consensus 4 ~~k~v~v~G-~g~~G~s~a~~l~~~-G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~--~~~~~d~vV~s~gi~ 79 (447)
T PRK02472 4 QNKKVLVLG-LAKSGYAAAKLLHKL-GANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLEL--LDEDFDLMVKNPGIP 79 (447)
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHH--hcCcCCEEEECCCCC
Confidence 467899999 567999999999985 9999999865422 23345567644332222221 112489999988743
No 489
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.34 E-value=0.13 Score=44.18 Aligned_cols=38 Identities=21% Similarity=0.242 Sum_probs=31.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHH
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (255)
++|.|+| +|.+|...++.+.. .|.+|++.+.+++.++.
T Consensus 8 ~~VaVIG-aG~MG~giA~~~a~-aG~~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIG-SGVIGSGWVARALA-HGLDVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEEC-cCHHHHHHHHHHHh-CCCeEEEEeCCHHHHHH
Confidence 6799999 89999988777776 49999999998876554
No 490
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=94.31 E-value=0.11 Score=43.69 Aligned_cols=86 Identities=19% Similarity=0.244 Sum_probs=54.1
Q ss_pred EEEEEcCCchHHHHH-HHHHHHhcCCcEEEE-ecChhh--HHHHHHcCCCEEEcCCCccccccCCCccEEEECCCCccce
Q 025278 153 SILVLGGAGGVGTMV-IQLAKHVFGASKVAA-TSSTAK--LDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGKMCIS 228 (255)
Q Consensus 153 ~VlI~ga~g~~G~~a-~~~a~~~~g~~vi~~-~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~~~d~vid~~G~~~~~ 228 (255)
+|.|+| +|.+|... ..+.+ ....++..+ +.++++ ++.++++|....++.-+.-.. ..++|+||++++...-.
T Consensus 3 rVAIIG-~G~IG~~h~~~ll~-~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~~~e~ll~--~~dIDaV~iaTp~~~H~ 78 (285)
T TIGR03215 3 KVAIIG-SGNIGTDLMYKLLR-SEHLEMVAMVGIDPESDGLARARELGVKTSAEGVDGLLA--NPDIDIVFDATSAKAHA 78 (285)
T ss_pred EEEEEe-CcHHHHHHHHHHHh-CCCcEEEEEEeCCcccHHHHHHHHCCCCEEECCHHHHhc--CCCCCEEEECCCcHHHH
Confidence 688999 79999865 45554 357788865 455554 566788887655432111111 24799999999977555
Q ss_pred eeeeeccccCCceEEE
Q 025278 229 IVYQKCDKFQEKSLIN 244 (255)
Q Consensus 229 ~~~~~~~~~~~G~~v~ 244 (255)
..+....+ .|+-++
T Consensus 79 e~a~~al~--aGk~VI 92 (285)
T TIGR03215 79 RHARLLAE--LGKIVI 92 (285)
T ss_pred HHHHHHHH--cCCEEE
Confidence 55555543 355543
No 491
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=94.31 E-value=0.25 Score=38.97 Aligned_cols=72 Identities=28% Similarity=0.390 Sum_probs=48.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhh-HHHHHHcCC--CEE-E--cCCCcc-----ccc---cCCCcc
Q 025278 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGA--DLA-I--DYTKEN-----IED---LPEKFD 216 (255)
Q Consensus 151 g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~~~~~g~--~~v-~--~~~~~~-----~~~---~~~~~d 216 (255)
.+..+|+|+++++|.+.++.+.. .|+++.+.+.+.+. .+.++.++. +|. | |..+.. +++ ..+.++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~-~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAK-KGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHh-cCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence 35678999999999999988887 49999999876554 344567764 332 2 222111 111 124689
Q ss_pred EEEECCC
Q 025278 217 VVFDAVG 223 (255)
Q Consensus 217 ~vid~~G 223 (255)
++++|.|
T Consensus 93 vlVncAG 99 (256)
T KOG1200|consen 93 VLVNCAG 99 (256)
T ss_pred EEEEcCc
Confidence 9999999
No 492
>PRK06823 ornithine cyclodeaminase; Validated
Probab=94.28 E-value=1 Score=38.64 Aligned_cols=97 Identities=11% Similarity=0.068 Sum_probs=64.1
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEecChhhHHHH----HHcCCCEEEcCCCccccccCCCccEEEECC
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL----RSLGADLAIDYTKENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~d~vid~~ 222 (255)
.+..+++.|+| +|..+...++.....+. .+|.+..+++++.+.+ ++.+.+...- .+.++...+.|+|+-|+
T Consensus 125 ~~d~~~l~iiG-~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~---~~~~~av~~ADIV~taT 200 (315)
T PRK06823 125 PQHVSAIGIVG-TGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTT---LDAAEVAHAANLIVTTT 200 (315)
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEE---CCHHHHhcCCCEEEEec
Confidence 35667899999 99999887777766544 4566778998887643 2234332211 23344457899999998
Q ss_pred CCccceeeeeeccccCCceEEEEeeccC
Q 025278 223 GKMCISIVYQKCDKFQEKSLINFGLFRQ 250 (255)
Q Consensus 223 G~~~~~~~~~~~~~~~~G~~v~~G~~~~ 250 (255)
++..-.. -...++ ++-.+..+|.+..
T Consensus 201 ~s~~P~~-~~~~l~-~G~hi~~iGs~~p 226 (315)
T PRK06823 201 PSREPLL-QAEDIQ-PGTHITAVGADSP 226 (315)
T ss_pred CCCCcee-CHHHcC-CCcEEEecCCCCc
Confidence 8665332 244565 6668888887654
No 493
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.25 E-value=0.2 Score=39.66 Aligned_cols=98 Identities=20% Similarity=0.126 Sum_probs=56.4
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCCCEEEcCCCccccccCCCccEEEEC
Q 025278 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIEDLPEKFDVVFDA 221 (255)
Q Consensus 146 ~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~d~vid~ 221 (255)
....++.+||-.| + |.|..+..+++. +.+|+++|.+++-++.+++ .+........+.......+.+|+|+.+
T Consensus 26 ~~~~~~~~vLDiG-c-G~G~~a~~la~~--g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~I~~~ 101 (195)
T TIGR00477 26 VKTVAPCKTLDLG-C-GQGRNSLYLSLA--GYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAAALNEDYDFIFST 101 (195)
T ss_pred hccCCCCcEEEeC-C-CCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhccccCCCCEEEEe
Confidence 3444567899888 4 458888888874 7899999999887765532 232211110011101113469999864
Q ss_pred CCC--------ccceeeeeeccccCCceEEEEeec
Q 025278 222 VGK--------MCISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 222 ~G~--------~~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
.-- ......+.+.++ ++|+++++-..
T Consensus 102 ~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lli~~~~ 135 (195)
T TIGR00477 102 VVFMFLQAGRVPEIIANMQAHTR-PGGYNLIVAAM 135 (195)
T ss_pred cccccCCHHHHHHHHHHHHHHhC-CCcEEEEEEec
Confidence 221 122334455566 89996665443
No 494
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=94.24 E-value=0.36 Score=38.30 Aligned_cols=98 Identities=18% Similarity=0.205 Sum_probs=58.2
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCCCE--EEcCCCccccccCCCccEE
Q 025278 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEKFDVV 218 (255)
Q Consensus 145 ~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~~d~v 218 (255)
.....++.+||-.| +|. |..+..+++. +.+|+++|.+++-++.+++ .+... ....+-.++ ...+.+|+|
T Consensus 25 ~l~~~~~~~vLDiG-cG~-G~~a~~La~~--g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I 99 (197)
T PRK11207 25 AVKVVKPGKTLDLG-CGN-GRNSLYLAAN--GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFI 99 (197)
T ss_pred hcccCCCCcEEEEC-CCC-CHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEE
Confidence 33455678899998 544 8888888874 7899999999886666543 23221 111111111 123469999
Q ss_pred EECCCCc--------cceeeeeeccccCCceEEEEeec
Q 025278 219 FDAVGKM--------CISIVYQKCDKFQEKSLINFGLF 248 (255)
Q Consensus 219 id~~G~~--------~~~~~~~~~~~~~~G~~v~~G~~ 248 (255)
+.+..-. .....+.+.++ ++|.++++..+
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~i~~~Lk-pgG~~~~~~~~ 136 (197)
T PRK11207 100 LSTVVLMFLEAKTIPGLIANMQRCTK-PGGYNLIVAAM 136 (197)
T ss_pred EEecchhhCCHHHHHHHHHHHHHHcC-CCcEEEEEEEe
Confidence 9764311 22223455566 89996655444
No 495
>PRK12827 short chain dehydrogenase; Provisional
Probab=94.22 E-value=0.3 Score=39.63 Aligned_cols=34 Identities=24% Similarity=0.454 Sum_probs=28.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEec
Q 025278 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184 (255)
Q Consensus 150 ~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~ 184 (255)
.+.+++|+||+|++|...+..+.. .|.+++++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~-~g~~v~~~~~ 38 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAA-DGADVIVLDI 38 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCeEEEEcC
Confidence 457899999999999998887777 4899888654
No 496
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=94.22 E-value=0.91 Score=39.09 Aligned_cols=96 Identities=9% Similarity=0.068 Sum_probs=61.6
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEecChhhHHHH-H---HcCCCEEEcCCCccccccCCCccEEEECC
Q 025278 148 FSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLL-R---SLGADLAIDYTKENIEDLPEKFDVVFDAV 222 (255)
Q Consensus 148 ~~~g~~VlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~-~---~~g~~~v~~~~~~~~~~~~~~~d~vid~~ 222 (255)
.+...++.|+| +|..|...++.+.... ..++.+.+++.++.+.+ + ++|..... . .+..+..++.|+|+-|+
T Consensus 125 ~~~~~~lgiiG-~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~-~--~~~~eav~~aDiVitaT 200 (325)
T TIGR02371 125 RKDSSVLGIIG-AGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRA-A--TDPREAVEGCDILVTTT 200 (325)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEE-e--CCHHHHhccCCEEEEec
Confidence 34568899999 9999998665555433 45677778998887654 3 34432111 1 23334456899999998
Q ss_pred CCccceeeeeeccccCCceEEEEeecc
Q 025278 223 GKMCISIVYQKCDKFQEKSLINFGLFR 249 (255)
Q Consensus 223 G~~~~~~~~~~~~~~~~G~~v~~G~~~ 249 (255)
.+.. ...-...++ ++-.+..+|.+.
T Consensus 201 ~s~~-P~~~~~~l~-~g~~v~~vGs~~ 225 (325)
T TIGR02371 201 PSRK-PVVKADWVS-EGTHINAIGADA 225 (325)
T ss_pred CCCC-cEecHHHcC-CCCEEEecCCCC
Confidence 7654 222344555 666788898754
No 497
>PRK07402 precorrin-6B methylase; Provisional
Probab=94.20 E-value=0.35 Score=38.21 Aligned_cols=101 Identities=15% Similarity=0.164 Sum_probs=58.0
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHH----cCCC--EEEcCCCcc-ccccCCCcc
Q 025278 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKEN-IEDLPEKFD 216 (255)
Q Consensus 144 ~~~~~~~g~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~-~~~~~~~~d 216 (255)
....++++++|+=.| + +.|..+..+++...+.++++++.+++..+.+++ ++.+ .++..+..+ +.......|
T Consensus 34 ~~l~~~~~~~VLDiG-~-G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d 111 (196)
T PRK07402 34 SQLRLEPDSVLWDIG-A-GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPD 111 (196)
T ss_pred HhcCCCCCCEEEEeC-C-CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCC
Confidence 455677889888777 3 346666677765446899999999988877643 4543 233322211 111122334
Q ss_pred E-EEECCCC-ccceeeeeeccccCCceEEEEee
Q 025278 217 V-VFDAVGK-MCISIVYQKCDKFQEKSLINFGL 247 (255)
Q Consensus 217 ~-vid~~G~-~~~~~~~~~~~~~~~G~~v~~G~ 247 (255)
. +++.... ......+.+.++ ++|+++..-.
T Consensus 112 ~v~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~ 143 (196)
T PRK07402 112 RVCIEGGRPIKEILQAVWQYLK-PGGRLVATAS 143 (196)
T ss_pred EEEEECCcCHHHHHHHHHHhcC-CCeEEEEEee
Confidence 4 4443221 133334455566 7899887754
No 498
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=94.17 E-value=0.11 Score=43.16 Aligned_cols=71 Identities=13% Similarity=0.191 Sum_probs=49.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHHHcCCCEEEcCC-C-cccccc--CCCccEEEECCCC
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT-K-ENIEDL--PEKFDVVFDAVGK 224 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~v~~~~-~-~~~~~~--~~~~d~vid~~G~ 224 (255)
.+|+|+||+|- |...+..+... |.+|+++++++.+.+.+.+.|...+.... + ....+. ..++|+|||++..
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~-g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ-GIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHP 75 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC-CCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence 37999997776 88888766664 89999999999888777777655554222 1 112121 3479999999773
No 499
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.16 E-value=0.29 Score=39.82 Aligned_cols=74 Identities=20% Similarity=0.299 Sum_probs=53.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHHHH--HcCCCEEEcCCCcc---cccc-CCCccEEEECCCCc
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR--SLGADLAIDYTKEN---IEDL-PEKFDVVFDAVGKM 225 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~--~~g~~~v~~~~~~~---~~~~-~~~~d~vid~~G~~ 225 (255)
++++|.| +|.+|...++.+... |..|++++.++++.+... ++.. +++..+..+ +.+. ...+|+++=++|..
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~-g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t~~~~L~~agi~~aD~vva~t~~d 77 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEE-GHNVVLIDRDEERVEEFLADELDT-HVVIGDATDEDVLEEAGIDDADAVVAATGND 77 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhC-CCceEEEEcCHHHHHHHhhhhcce-EEEEecCCCHHHHHhcCCCcCCEEEEeeCCC
Confidence 3688999 999999999999984 999999999999987743 3554 344333322 2222 35799999999975
Q ss_pred cce
Q 025278 226 CIS 228 (255)
Q Consensus 226 ~~~ 228 (255)
...
T Consensus 78 ~~N 80 (225)
T COG0569 78 EVN 80 (225)
T ss_pred HHH
Confidence 443
No 500
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.15 E-value=0.18 Score=42.53 Aligned_cols=38 Identities=16% Similarity=0.288 Sum_probs=32.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEecChhhHHH
Q 025278 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (255)
Q Consensus 152 ~~VlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (255)
.+|.|+| +|.+|.-.++.+.. .|.+|++.++++++++.
T Consensus 6 ~~V~ViG-aG~mG~~iA~~~a~-~G~~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVG-AGQMGAGIAEVCAR-AGVDVLVFETTEELATA 43 (286)
T ss_pred cEEEEEc-ccHHHHHHHHHHHh-CCCEEEEEECCHHHHHH
Confidence 4799999 89999887777766 49999999999998765
Done!