Query 025280
Match_columns 255
No_of_seqs 179 out of 1031
Neff 3.6
Searched_HMMs 46136
Date Fri Mar 29 04:14:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025280.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025280hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02800 imidazoleglycerol-pho 100.0 1.5E-90 3.2E-95 627.0 20.8 220 23-254 12-239 (261)
2 COG0131 HisB Imidazoleglycerol 100.0 8.7E-90 1.9E-94 599.3 17.6 175 79-253 2-176 (195)
3 PRK13598 hisB imidazoleglycero 100.0 1.2E-88 2.6E-93 593.4 18.8 173 81-253 3-175 (193)
4 PRK00951 hisB imidazoleglycero 100.0 2.4E-88 5.2E-93 592.3 18.7 174 80-253 2-175 (195)
5 cd07914 IGPD Imidazoleglycerol 100.0 2.2E-87 4.7E-92 584.4 17.4 171 83-253 1-171 (190)
6 PRK05446 imidazole glycerol-ph 100.0 3.4E-80 7.3E-85 577.7 18.6 174 79-254 164-337 (354)
7 PF00475 IGPD: Imidazoleglycer 100.0 1.9E-76 4E-81 497.8 12.5 144 110-253 1-144 (145)
8 KOG3143 Imidazoleglycerol-phos 100.0 1.2E-72 2.6E-77 490.5 10.8 194 45-253 6-199 (219)
9 PRK05446 imidazole glycerol-ph 97.4 0.00037 8E-09 66.4 6.8 78 81-162 254-341 (354)
10 PLN02800 imidazoleglycerol-pho 97.3 0.00046 1E-08 64.0 6.4 79 81-162 153-243 (261)
11 PRK13598 hisB imidazoleglycero 97.3 0.00054 1.2E-08 61.2 6.5 71 89-162 99-180 (193)
12 cd07914 IGPD Imidazoleglycerol 97.3 0.0006 1.3E-08 60.7 6.6 79 81-162 87-176 (190)
13 PRK00951 hisB imidazoleglycero 97.2 0.00087 1.9E-08 59.9 6.7 79 81-162 91-180 (195)
14 PF00475 IGPD: Imidazoleglycer 96.9 0.0051 1.1E-07 52.9 8.3 76 80-158 59-145 (145)
15 COG0131 HisB Imidazoleglycerol 96.4 0.0082 1.8E-07 53.9 6.0 71 89-162 100-181 (195)
16 KOG3143 Imidazoleglycerol-phos 86.8 1.2 2.6E-05 40.3 4.9 73 89-164 123-206 (219)
17 TIGR00321 dhys deoxyhypusine s 64.8 7.2 0.00016 37.2 3.5 68 95-181 47-125 (301)
18 PRK02492 deoxyhypusine synthas 58.9 7.6 0.00016 37.7 2.6 70 92-179 57-139 (347)
19 PRK02301 putative deoxyhypusin 56.3 8.3 0.00018 37.0 2.3 76 91-181 55-138 (316)
20 PRK00805 putative deoxyhypusin 56.3 8.6 0.00019 37.1 2.4 75 92-181 45-127 (329)
21 PRK03971 putative deoxyhypusin 55.4 12 0.00025 36.3 3.2 73 92-181 65-146 (334)
22 PRK01221 putative deoxyhypusin 54.2 2.9 6.3E-05 40.0 -1.1 72 95-180 56-135 (312)
23 KOG3414 Component of the U4/U6 48.1 8.1 0.00018 33.4 0.8 38 154-191 11-55 (142)
24 COG1899 DYS1 Deoxyhypusine syn 47.2 9.7 0.00021 36.8 1.2 82 84-179 45-134 (318)
25 PRK00770 deoxyhypusine synthas 42.5 22 0.00048 35.0 2.9 72 92-180 50-133 (384)
26 COG2100 Predicted Fe-S oxidore 42.5 72 0.0015 31.9 6.3 112 95-242 160-274 (414)
27 cd00419 Ferrochelatase_C Ferro 36.0 71 0.0015 26.4 4.6 46 113-159 77-122 (135)
28 PF09918 DUF2148: Uncharacteri 31.0 31 0.00068 26.7 1.6 16 146-161 11-26 (69)
29 PF13558 SbcCD_C: Putative exo 29.4 29 0.00063 26.6 1.2 33 149-182 42-74 (90)
30 PF10747 DUF2522: Protein of u 28.2 1.9E+02 0.004 25.1 5.9 69 152-231 56-126 (142)
31 COG1255 Uncharacterized protei 27.0 69 0.0015 27.5 3.0 30 102-133 13-42 (129)
32 PRK00132 rpsI 30S ribosomal pr 25.3 1.5E+02 0.0033 25.1 4.8 51 83-137 8-70 (130)
33 cd01209 SHC SHC phosphotyrosin 24.5 33 0.00072 30.2 0.8 71 90-160 73-156 (160)
34 PF14433 SUKH-3: SUKH-3 immuni 24.2 1.6E+02 0.0034 24.0 4.7 95 111-221 32-137 (142)
35 PF09974 DUF2209: Uncharacteri 23.4 35 0.00075 29.3 0.6 19 210-228 54-72 (128)
36 COG4324 Predicted aminopeptida 23.1 39 0.00085 32.9 1.0 43 155-198 78-121 (376)
37 cd04483 hOBFC1_like hOBFC1_lik 22.9 1.2E+02 0.0025 23.7 3.5 21 85-106 7-27 (92)
38 PF03719 Ribosomal_S5_C: Ribos 22.6 1.7E+02 0.0036 22.3 4.2 35 216-250 26-61 (74)
39 cd01273 CED-6 CED-6 Phosphotyr 22.5 52 0.0011 27.4 1.5 69 92-161 55-137 (142)
No 1
>PLN02800 imidazoleglycerol-phosphate dehydratase
Probab=100.00 E-value=1.5e-90 Score=627.00 Aligned_cols=220 Identities=68% Similarity=0.981 Sum_probs=200.7
Q ss_pred eeccCcccccccccccccccccc-------ccccccccCCccCCCCCCCCCCCCCCCCCCCCCCCceEEEEeeeCCeEEE
Q 025280 23 LVKPKTNLSRKLLPISTQYCSST-------RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVS 95 (255)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~a~i~R~TkET~I~ 95 (255)
++||+++ ++.++|.++++.++. ++++. +++++++|++ ..+++..+.|+++++|+|+||+|+
T Consensus 12 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~R~a~v~R~TkET~I~ 79 (261)
T PLN02800 12 LLRPKLS-FIDLLPRRAAIVSSPSSSLPRFLRMES--QLRQSISCAA---------SSSSSNALGRIGEVKRVTKETNVS 79 (261)
T ss_pred hcCCCcc-ccccccccccccccccccccccccccc--ccCCCccccc---------ccCCCCccceeEEEEecccceEEE
Confidence 4789999 888888888866653 23333 4455555544 233444467999999999999999
Q ss_pred EEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHHHHhcCCccccceecceec
Q 025280 96 VKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTA 175 (255)
Q Consensus 96 v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al~~ALGdK~GI~RyG~a~v 175 (255)
|+|||||+|+++|+||||||||||+||++||+|||+|+|+||++||+|||||||||+|||||+||||||+||+|||++++
T Consensus 80 v~l~LDG~G~~~i~TGi~FlDHML~~~a~Hg~fdL~V~a~GDl~vD~HHtvEDvgI~LG~Al~~ALGdk~GI~RyG~a~v 159 (261)
T PLN02800 80 VKINLDGTGVADSSTGIPFLDHMLDQLASHGLFDVHVKATGDLWIDDHHTNEDVALAIGTALLKALGDRKGINRFGDFSA 159 (261)
T ss_pred EEEEeCCCCceeeecCccHHHHHHHHHHHHcCCCeEEEEecCccccCCCchhhhhhhHHHHHHHHhcCccccceeEeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeEEEEEcCCCceeEEeccCCcceecccccccHHHHHHHHHHhcCCeEEEEec-ccCChhHHHHHHHHHhhhccc
Q 025280 176 PLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQL-KRGSTTILILHGIHGLGMGFF 254 (255)
Q Consensus 176 PMDEALa~vavDlSGRpylv~~~~f~~~~iG~f~teLv~eFf~sfa~~a~~TLHI~~l-~G~N~HH~iEA~FKAlG~Al~ 254 (255)
||||||++|+|||||||||+|+++|+.++||+|++||++|||+||+++++|||||+++ ||+|+||++||+|||||+||-
T Consensus 160 PMDEALa~vavDlSGRpylv~~~~~~~~~iG~~~telv~hFf~s~a~~a~~tLHi~~l~~G~N~HH~~EA~FKAfgrALr 239 (261)
T PLN02800 160 PLDEALIEVVLDLSGRPYLGYNLEIPTERVGDLDTEMVEHFFQSLVNNSGMTVHIRQLAAGKNSHHIIEATAKAFGRALR 239 (261)
T ss_pred cccceeEEEEEECCCCCceeecCCCCccccCCCchHHHHHHHHHHHhcCCCEEEEEecccCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988 999999999999999999984
No 2
>COG0131 HisB Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.7e-90 Score=599.31 Aligned_cols=175 Identities=49% Similarity=0.812 Sum_probs=173.4
Q ss_pred CCceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHHH
Q 025280 79 SGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALL 158 (255)
Q Consensus 79 ~~R~a~i~R~TkET~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al~ 158 (255)
.+|++++.|+|+||+|+|+|||||+|+++|+||||||||||+||++||+|||+|+|+||++||+|||||||||+|||||+
T Consensus 2 ~~R~a~v~R~T~ET~I~V~i~lDg~G~~~i~TGv~FfDHML~~~a~H~~~dl~V~a~GDl~iDdHHtvED~gIaLGqAl~ 81 (195)
T COG0131 2 AMRTAEVTRKTKETDIEVSLDLDGTGKSKIDTGVGFFDHMLDQLARHGGFDLEVSAKGDLHIDDHHTVEDTGIALGQALK 81 (195)
T ss_pred CCceeEEEecccceEEEEEEEcCCCCceeecCCCchHHHHHHHHHHhCCCceEEEEccCccccccchHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCccccceecceecccccceeEEEEEcCCCceeEEeccCCcceecccccccHHHHHHHHHHhcCCeEEEEecccCCh
Q 025280 159 QALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGST 238 (255)
Q Consensus 159 ~ALGdK~GI~RyG~a~vPMDEALa~vavDlSGRpylv~~~~f~~~~iG~f~teLv~eFf~sfa~~a~~TLHI~~l~G~N~ 238 (255)
||||||+||+|||++++||||||++|+|||||||||+|+++|++++||+|+|||++|||++||++++||||++++||+|+
T Consensus 82 ~AlGdk~GI~Rfg~~~vPMDEaL~~~~vDlSGRp~lv~~~~f~~~~vG~~~te~v~hFf~sla~~a~itlHi~~~~G~N~ 161 (195)
T COG0131 82 EALGDKRGIRRFGSAYVPMDEALARVAVDLSGRPYLVFNAEFTREKVGDFDTELVEHFFRSLANNAGITLHLSVLYGKND 161 (195)
T ss_pred HHhcccccceecccccccchhhhheeEEecCCCeeEEEecccCccccCCcchhhHHHHHHHHHHhcCcEEEEEeccCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhcc
Q 025280 239 TILILHGIHGLGMGF 253 (255)
Q Consensus 239 HH~iEA~FKAlG~Al 253 (255)
||++||+|||||+||
T Consensus 162 HH~iEa~FKA~arAL 176 (195)
T COG0131 162 HHIIEALFKAFARAL 176 (195)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999997
No 3
>PRK13598 hisB imidazoleglycerol-phosphate dehydratase; Provisional
Probab=100.00 E-value=1.2e-88 Score=593.38 Aligned_cols=173 Identities=40% Similarity=0.618 Sum_probs=172.0
Q ss_pred ceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHHHHh
Q 025280 81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQA 160 (255)
Q Consensus 81 R~a~i~R~TkET~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al~~A 160 (255)
|+++++|+|+||+|+|+|||||+|+++|+||||||||||++||+||+|||+|+|+||++||+|||||||||+|||||+||
T Consensus 3 R~a~i~R~T~ET~I~v~l~Ldg~g~~~i~TGi~FlDHML~~~a~H~~~dL~v~a~GDl~vD~HHtvEDvgI~LG~al~~A 82 (193)
T PRK13598 3 RNANITRETKETKIEVFLDIDRKGEIKVSTPVPFFNHMLITLLTYMNSTATVSATDKLPYDDHHIVEDVAITLGLAIKEA 82 (193)
T ss_pred ceEEEEEcccceEEEEEEEeCCCCceEEecCCchHHHHHHHHHHHcCCCeEEEEecCccccCCCchhhhhhhHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccceecceecccccceeEEEEEcCCCceeEEeccCCcceecccccccHHHHHHHHHHhcCCeEEEEecccCChhH
Q 025280 161 LGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTI 240 (255)
Q Consensus 161 LGdK~GI~RyG~a~vPMDEALa~vavDlSGRpylv~~~~f~~~~iG~f~teLv~eFf~sfa~~a~~TLHI~~l~G~N~HH 240 (255)
||||+||+|||++++||||||++|+||||||||++|+++|++++||+|++||++|||+|||+++++||||+++||+|+||
T Consensus 83 lgdk~gI~RyG~a~vPMDEaLa~~~vDlsGRpylv~~~~~~~~~iG~~~~elv~~Ff~s~a~~a~~tlHi~~~~G~N~HH 162 (193)
T PRK13598 83 LGDKRGIKRFSHQIIPMDEALVLVSLDISGRGMAFVNLNLKRSEIGGLATENIPHFFQSFAYNSGVTLHISQLSGYNTHH 162 (193)
T ss_pred hcCcccceeeecceecchheeeEEEEEcCCCCeEEEccccCccccCCCchhhHHHHHHHHHhcCCCeEEEEEccCCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcc
Q 025280 241 LILHGIHGLGMGF 253 (255)
Q Consensus 241 ~iEA~FKAlG~Al 253 (255)
++||+|||||+||
T Consensus 163 ~~EA~FKA~g~AL 175 (193)
T PRK13598 163 IIEASFKGLGLAL 175 (193)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999997
No 4
>PRK00951 hisB imidazoleglycerol-phosphate dehydratase; Validated
Probab=100.00 E-value=2.4e-88 Score=592.34 Aligned_cols=174 Identities=51% Similarity=0.858 Sum_probs=172.5
Q ss_pred CceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHHHH
Q 025280 80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQ 159 (255)
Q Consensus 80 ~R~a~i~R~TkET~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al~~ 159 (255)
+|+++++|+|+||+|+|+|||||+|+++|+||||||||||++||+||+|||+|+|+||++||+|||||||||+|||||+|
T Consensus 2 ~R~a~v~R~T~ET~I~v~l~LDG~g~~~i~TGi~FlDHML~~~a~H~~~dL~v~a~GDl~vD~HHtvEDvgI~LG~al~~ 81 (195)
T PRK00951 2 MRTAEVERKTKETDISVELNLDGTGKSDIDTGVGFLDHMLDQFARHGLFDLTVKAKGDLHIDDHHTVEDVGIVLGQALKE 81 (195)
T ss_pred CceEEEEEcccceEEEEEEEeCCCCccceeCCccHHHHHHHHHHHHcCCCeEEEEecCccccCCchHHHHHHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCccccceecceecccccceeEEEEEcCCCceeEEeccCCcceecccccccHHHHHHHHHHhcCCeEEEEecccCChh
Q 025280 160 ALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTT 239 (255)
Q Consensus 160 ALGdK~GI~RyG~a~vPMDEALa~vavDlSGRpylv~~~~f~~~~iG~f~teLv~eFf~sfa~~a~~TLHI~~l~G~N~H 239 (255)
|||||+||+|||++++||||||++|+||||||||++|+++|++++||+|++||++|||+|||+++++||||+++||+|+|
T Consensus 82 aLgdk~GI~Ryg~a~~PMDEaL~~v~vDlSGRpyl~~~~~~~~~~iG~~~tel~~~Ff~s~a~~a~~tlHi~~~~G~N~H 161 (195)
T PRK00951 82 ALGDKKGIRRYGHAYVPMDEALARVAVDLSGRPYLVFDVEFTREKIGTFDTELVREFFEAFANNAGITLHIRVLYGRNAH 161 (195)
T ss_pred HhcCccccceeEeeeechhheeEEEEEECCCCCeEEEecCCCccccCCCchHHHHHHHHHHHhcCCCeEEEEecccCChH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcc
Q 025280 240 ILILHGIHGLGMGF 253 (255)
Q Consensus 240 H~iEA~FKAlG~Al 253 (255)
|++||+|||||+||
T Consensus 162 H~~Ea~FKa~g~AL 175 (195)
T PRK00951 162 HIIEALFKAFARAL 175 (195)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999997
No 5
>cd07914 IGPD Imidazoleglycerol-phosphate dehydratase. Imidazoleglycerol-phosphate dehydratase (IGPD; EC 4.2.1.19) catalyzes the dehydration of imidazole glycerol phosphate to imidazole acetol phosphate, the sixth step of histidine biosynthesis in plants and microorganisms where the histidine is synthesized de novo. There is an internal repeat in the protein domain that is related by pseudo-dyad symmetry, perhaps as a result of an ancient gene duplication. The apo-form of IGPD exists as a catalytically inactive trimer which, in the presence of specific divalent metal cations such as manganese (Mn2+), cobalt (Co2+), cadmium (Cd2+), nickel (Ni2+), iron (Fe2+) and zinc (Zn2+), assembles to form a biologically active high molecular weight metalloenzyme; a 24-mer with 4-3-2 symmetry. Each 24-mer has 24 active sites, and contains around 1.5 metal ions per monomer, each monomer contributing residues to three separate active sites. IGPD enzymes are monofunctional in fungi, plants, archaea and s
Probab=100.00 E-value=2.2e-87 Score=584.37 Aligned_cols=171 Identities=47% Similarity=0.822 Sum_probs=169.4
Q ss_pred EEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHHHHhcC
Q 025280 83 GEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALG 162 (255)
Q Consensus 83 a~i~R~TkET~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al~~ALG 162 (255)
++++|+|+||+|+|+|||||+|+++|+||||||||||+||++||+|||+|+|+||++||+|||||||||+|||||+||||
T Consensus 1 a~v~R~T~ET~I~v~l~LDg~g~~~i~TGi~FlDHML~~~a~H~~~dL~v~a~GDl~vD~HHtvEDvgI~LG~al~~aLg 80 (190)
T cd07914 1 AEIERKTKETDIEVELNLDGTGKSKIDTGIGFFDHMLTLFARHGGFDLTVKAKGDLEVDDHHTVEDVGIVLGQALKKALG 80 (190)
T ss_pred CeeEecccceEEEEEEEeCCCCccceecCCcHHHHHHHHHHHHcCCCeEEEEecCccccCCcchhhhHhhHHHHHHHHhc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceecceecccccceeEEEEEcCCCceeEEeccCCcceecccccccHHHHHHHHHHhcCCeEEEEecccCChhHHH
Q 025280 163 DRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTILI 242 (255)
Q Consensus 163 dK~GI~RyG~a~vPMDEALa~vavDlSGRpylv~~~~f~~~~iG~f~teLv~eFf~sfa~~a~~TLHI~~l~G~N~HH~i 242 (255)
||+||+|||++++||||||++|+||||||||++|+++|++++||+|++||++|||+|||++++|||||+++||+|+||++
T Consensus 81 dk~GI~RyG~a~~PMDEal~~v~vDlsGRp~l~~~~~~~~~~iG~~~telv~~Ff~s~a~~a~~tlHi~~~~G~N~HH~~ 160 (190)
T cd07914 81 DKKGIRRYGSALVPMDEALARVAVDLSGRPYLVFDAEFPREKIGDFDTELVEEFFRSFANNAGITLHIRVLYGRNDHHII 160 (190)
T ss_pred CccccceeEccccccchhheEEEEECCCCCeEEEecCcCcCccCCCChHHHHHHHHHHHhcCCCeEEEEEeecCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcc
Q 025280 243 LHGIHGLGMGF 253 (255)
Q Consensus 243 EA~FKAlG~Al 253 (255)
||+|||||+||
T Consensus 161 Ea~FKalgrAL 171 (190)
T cd07914 161 EAIFKAFARAL 171 (190)
T ss_pred HHHHHHHHHHH
Confidence 99999999997
No 6
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=100.00 E-value=3.4e-80 Score=577.73 Aligned_cols=174 Identities=44% Similarity=0.727 Sum_probs=171.3
Q ss_pred CCceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHHH
Q 025280 79 SGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALL 158 (255)
Q Consensus 79 ~~R~a~i~R~TkET~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al~ 158 (255)
.+|+++++|+|+||+|+|+|||||+|+++|+||||||||||++|++||+|||+|+|+||++||+|||||||||||||||+
T Consensus 164 ~~r~~~~~R~t~et~i~~~l~ldg~g~~~i~tgi~f~dhml~~~~~h~~~~l~v~~~gd~~vd~hh~~ed~~i~lG~a~~ 243 (354)
T PRK05446 164 RDRYAHVVRNTKETDIDVEVWLDREGKSKINTGIGFFDHMLDQIATHGGFRLEIKVKGDLHIDDHHTVEDTALALGEALK 243 (354)
T ss_pred CCceEEEEecccceEEEEEEEeCCCCceeeecCCcHHHHHHHHHHHHcCCCeEEEEecCccccCCchHHHHHHHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCccccceecceecccccceeEEEEEcCCCceeEEeccCCcceecccccccHHHHHHHHHHhcCCeEEEEecccCCh
Q 025280 159 QALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGST 238 (255)
Q Consensus 159 ~ALGdK~GI~RyG~a~vPMDEALa~vavDlSGRpylv~~~~f~~~~iG~f~teLv~eFf~sfa~~a~~TLHI~~l~G~N~ 238 (255)
+|||||+||+|||+ ++||||||++|+||+|||||++|+.+|++++||+|++||++|||+|||+++++||||. +||+|+
T Consensus 244 ~alg~~~gi~r~g~-~~pmdeal~~~~~d~sgr~~~~~~~~~~~~~~g~~~~e~~~~f~~~~~~~~~~tlh~~-~~g~n~ 321 (354)
T PRK05446 244 QALGDKRGIGRFGF-VLPMDECLARCALDISGRPYLVFKAEFKRERVGDMSTEMVEHFFRSLSDAMGCTLHLK-TKGKND 321 (354)
T ss_pred HHhcCccccceeee-ccchhheeeEEEEECCCCCeeEEccCCCccccCCCCchHHHHHHHHHHhcCCCEEEEE-eccCCh
Confidence 99999999999999 9999999999999999999999999999999999999999999999999999999998 899999
Q ss_pred hHHHHHHHHHhhhccc
Q 025280 239 TILILHGIHGLGMGFF 254 (255)
Q Consensus 239 HH~iEA~FKAlG~Al~ 254 (255)
||++||+|||||+||-
T Consensus 322 hh~~ea~fKa~~~al~ 337 (354)
T PRK05446 322 HHKVESLFKAFGRALR 337 (354)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999973
No 7
>PF00475 IGPD: Imidazoleglycerol-phosphate dehydratase; InterPro: IPR000807 Imidazoleglycerol-phosphate dehydratase is the enzyme that catalyses the seventh step in the biosynthesis of histidine in bacteria, fungi and plants. In most organisms it is a monofunctional protein of about 22 to 29 kD. In some bacteria such as Escherichia coli, it is the C-terminal domain of a bifunctional protein that include a histidinol-phosphatase domain [].; GO: 0004424 imidazoleglycerol-phosphate dehydratase activity, 0000105 histidine biosynthetic process; PDB: 2F1D_G 2AE8_A 1RHY_B.
Probab=100.00 E-value=1.9e-76 Score=497.75 Aligned_cols=144 Identities=52% Similarity=0.895 Sum_probs=130.3
Q ss_pred cCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHHHHhcCCccccceecceecccccceeEEEEEcC
Q 025280 110 TCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLS 189 (255)
Q Consensus 110 TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al~~ALGdK~GI~RyG~a~vPMDEALa~vavDlS 189 (255)
||||||||||+||++||+|||+|+|+||++||+|||||||||+|||||+||||||+||+|||++++||||||++|+||||
T Consensus 1 TGi~F~DHML~~la~h~~~dl~v~a~GDl~vD~HHtvEDvgI~LG~al~~aLgdk~GI~Ryg~a~~PMDEaL~~v~vDls 80 (145)
T PF00475_consen 1 TGIGFFDHMLEQLAKHGGFDLSVKAKGDLEVDDHHTVEDVGIVLGQALRQALGDKRGINRYGSASVPMDEALARVAVDLS 80 (145)
T ss_dssp -S-HHHHHHHHHHHHHHT-EEEEEEEC-TTT-CHHHHHHHHHHHHHHHHHHHTT-TTB--EEEEEEEETTEEEEEEEEES
T ss_pred CCCchHHHHHHHHHHHCCCCEEEEEeCCCCcCcceehhhHHHHHHHHHHHHhccccCceeeeccccchhhhhheeEEEec
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEeccCCcceecccccccHHHHHHHHHHhcCCeEEEEecccCChhHHHHHHHHHhhhcc
Q 025280 190 GRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTILILHGIHGLGMGF 253 (255)
Q Consensus 190 GRpylv~~~~f~~~~iG~f~teLv~eFf~sfa~~a~~TLHI~~l~G~N~HH~iEA~FKAlG~Al 253 (255)
||||++|+.+|++++||+|++||++|||+|||++++|||||+++||+|+||++||+|||||+||
T Consensus 81 GRp~l~~~~~~~~~~iG~~~~el~~~F~~sla~~~~~tlHi~~~~G~N~HH~~Ea~FKa~grAL 144 (145)
T PF00475_consen 81 GRPYLVFNGEFPREKIGDFDTELVEHFFRSLANNAGITLHIRVLYGENDHHIIEAIFKAFGRAL 144 (145)
T ss_dssp SS-EEEEE---SSSEETTEETTHHHHHHHHHHHHHTEEEEEEEEE-SSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecccCccccCCCChhhHHHHHHHHHHhCCceEEEEEEeCCChHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999997
No 8
>KOG3143 consensus Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-72 Score=490.54 Aligned_cols=194 Identities=54% Similarity=0.815 Sum_probs=186.6
Q ss_pred cccccccccCCccCCCCCCCCCCCCCCCCCCCCCCCceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHh
Q 025280 45 TRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLAS 124 (255)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~a~i~R~TkET~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~ 124 (255)
.+.|+++.+.+.|+.|+ ..+.|.++..|.|+||.+++..|+||.+..+++|||||||||+++||+
T Consensus 6 alV~r~tnetkisiaia---------------ld~apl~ee~~~~~E~~~s~~anq~g~qVi~v~TGIgFLDHM~haLAk 70 (219)
T KOG3143|consen 6 ALVMRSTNETKISIAIA---------------LDNAPLGEEKRETKETNVSVKANQDGHQVIDVSTGIGFLDHMLHALAK 70 (219)
T ss_pred hHHhcccccccceEEEe---------------cCCCccchhhccccchhheeeecccCceeeecccCcchHHHHHHHHHh
Confidence 46788899999999884 234467889999999999999999999999999999999999999999
Q ss_pred hcCcceEEEEecCccccCCccchhhhhhHHHHHHHhcCCccccceecceecccccceeEEEEEcCCCceeEEeccCCcce
Q 025280 125 HGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQR 204 (255)
Q Consensus 125 Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al~~ALGdK~GI~RyG~a~vPMDEALa~vavDlSGRpylv~~~~f~~~~ 204 (255)
||||+|.|+|+||++||||||.||+||+||+||+||||+++||+|||.++.|+||||.+++||||||||++|++++++++
T Consensus 71 H~gwsl~v~~~GDlhIDDHHT~ED~aiAlG~Afk~AlG~~~GvkRFG~~~aPLDEALsr~vvDLSgRPYav~~Lgl~rek 150 (219)
T KOG3143|consen 71 HGGWSLHVRATGDLHIDDHHTNEDVAIALGTAFKKALGERKGVKRFGDFTAPLDEALSRVVVDLSGRPYAVYNLGLPREK 150 (219)
T ss_pred cCCceEEEEecCceeecccccchhHHHHHHHHHHHHHhhhhchhhcccccCcHHHHHhHheeccCCCeeEEEecCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccccHHHHHHHHHHhcCCeEEEEecccCChhHHHHHHHHHhhhcc
Q 025280 205 VGTYDTQLVEHFFQSLVNTSGMTLHIRQLKRGSTTILILHGIHGLGMGF 253 (255)
Q Consensus 205 iG~f~teLv~eFf~sfa~~a~~TLHI~~l~G~N~HH~iEA~FKAlG~Al 253 (255)
||++++|||+|||+||++.+||||||+|++|+|+||++|++||||++|+
T Consensus 151 VG~lscemipHfl~Sf~~asgiTLHv~cL~GkNdHHr~EsaFKalAvAl 199 (219)
T KOG3143|consen 151 VGTLSCEMIPHFLQSFVNASGITLHVRCLAGKNDHHRIESAFKALAVAL 199 (219)
T ss_pred cccchHhhHHHHHHHHHhhcCcEEEEEeecCCCchhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999986
No 9
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.40 E-value=0.00037 Score=66.45 Aligned_cols=78 Identities=23% Similarity=0.317 Sum_probs=65.3
Q ss_pred ceEEEEeeeCCeEEEEEEEeCCCceeeeecCC----------ccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhh
Q 025280 81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCI----------PFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVG 150 (255)
Q Consensus 81 R~a~i~R~TkET~I~v~LnLDG~G~~~I~TGI----------gFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvG 150 (255)
|-+. .=---|+-+.+.|++.|.+-...+.+. .-+.|.+..|+.|+++.|.|+..|+ ++||.+|-+-
T Consensus 254 r~g~-~~pmdeal~~~~~d~sgr~~~~~~~~~~~~~~g~~~~e~~~~f~~~~~~~~~~tlh~~~~g~---n~hh~~ea~f 329 (354)
T PRK05446 254 RFGF-VLPMDECLARCALDISGRPYLVFKAEFKRERVGDMSTEMVEHFFRSLSDAMGCTLHLKTKGK---NDHHKVESLF 329 (354)
T ss_pred eeee-ccchhheeeEEEEECCCCCeeEEccCCCccccCCCCchHHHHHHHHHHhcCCCEEEEEeccC---ChHHHHHHHH
Confidence 4444 345689999999999998865554433 2478999999999999999998897 7899999999
Q ss_pred hhHHHHHHHhcC
Q 025280 151 LAIGTALLQALG 162 (255)
Q Consensus 151 I~LG~Al~~ALG 162 (255)
-+||.||++|+.
T Consensus 330 Ka~~~al~~a~~ 341 (354)
T PRK05446 330 KAFGRALRQAIR 341 (354)
T ss_pred HHHHHHHHHHhc
Confidence 999999999995
No 10
>PLN02800 imidazoleglycerol-phosphate dehydratase
Probab=97.33 E-value=0.00046 Score=64.05 Aligned_cols=79 Identities=27% Similarity=0.456 Sum_probs=65.2
Q ss_pred ceEEEEeeeCCeEEEEEEEeCCCceeeeecCCc----------cHHHHHHHHHhhcCcceEEEE--ecCccccCCccchh
Q 025280 81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIP----------FLDHMLDQLASHGLFDVHVRA--TGDIHIDDHHTNED 148 (255)
Q Consensus 81 R~a~i~R~TkET~I~v~LnLDG~G~~~I~TGIg----------FlDHML~~~a~Hg~fdL~i~a--~GDl~VD~HHtVED 148 (255)
|-+...--=-|+-+.+.|||.|.+-...+-+++ -+.|++..|+.++++.|.|++ .|+ ++||.+|-
T Consensus 153 RyG~a~vPMDEALa~vavDlSGRpylv~~~~~~~~~iG~~~telv~hFf~s~a~~a~~tLHi~~l~~G~---N~HH~~EA 229 (261)
T PLN02800 153 RFGDFSAPLDEALIEVVLDLSGRPYLGYNLEIPTERVGDLDTEMVEHFFQSLVNNSGMTVHIRQLAAGK---NSHHIIEA 229 (261)
T ss_pred eeEeeeecccceeEEEEEECCCCCceeecCCCCccccCCCchHHHHHHHHHHHhcCCCEEEEEecccCC---cHHHHHHH
Confidence 444444455899999999999987655444332 478999999999999999986 686 67999999
Q ss_pred hhhhHHHHHHHhcC
Q 025280 149 VGLAIGTALLQALG 162 (255)
Q Consensus 149 vGI~LG~Al~~ALG 162 (255)
+--++|+||++|+.
T Consensus 230 ~FKAfgrALr~A~~ 243 (261)
T PLN02800 230 TAKAFGRALRQCAE 243 (261)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999995
No 11
>PRK13598 hisB imidazoleglycerol-phosphate dehydratase; Provisional
Probab=97.32 E-value=0.00054 Score=61.19 Aligned_cols=71 Identities=24% Similarity=0.344 Sum_probs=60.2
Q ss_pred eCCeEEEEEEEeCCCceeeeecCC----------ccHHHHHHHHHhhcCcceEEE-EecCccccCCccchhhhhhHHHHH
Q 025280 89 TKETNVSVKINVDGSGVADSSTCI----------PFLDHMLDQLASHGLFDVHVR-ATGDIHIDDHHTNEDVGLAIGTAL 157 (255)
Q Consensus 89 TkET~I~v~LnLDG~G~~~I~TGI----------gFlDHML~~~a~Hg~fdL~i~-a~GDl~VD~HHtVEDvGI~LG~Al 157 (255)
=-|+-+.+.|+|.|.+-+..+-+. .-+.|.+..||.++++.|.|+ .+|+ ++||.+|-+--+||.||
T Consensus 99 MDEaLa~~~vDlsGRpylv~~~~~~~~~iG~~~~elv~~Ff~s~a~~a~~tlHi~~~~G~---N~HH~~EA~FKA~g~AL 175 (193)
T PRK13598 99 MDEALVLVSLDISGRGMAFVNLNLKRSEIGGLATENIPHFFQSFAYNSGVTLHISQLSGY---NTHHIIEASFKGLGLAL 175 (193)
T ss_pred chheeeEEEEEcCCCCeEEEccccCccccCCCchhhHHHHHHHHHhcCCCeEEEEEccCC---ChHHHHHHHHHHHHHHH
Confidence 469999999999988765544322 246799999999999999997 6686 78999999999999999
Q ss_pred HHhcC
Q 025280 158 LQALG 162 (255)
Q Consensus 158 ~~ALG 162 (255)
++|+.
T Consensus 176 r~A~~ 180 (193)
T PRK13598 176 YEATR 180 (193)
T ss_pred HHHhc
Confidence 99995
No 12
>cd07914 IGPD Imidazoleglycerol-phosphate dehydratase. Imidazoleglycerol-phosphate dehydratase (IGPD; EC 4.2.1.19) catalyzes the dehydration of imidazole glycerol phosphate to imidazole acetol phosphate, the sixth step of histidine biosynthesis in plants and microorganisms where the histidine is synthesized de novo. There is an internal repeat in the protein domain that is related by pseudo-dyad symmetry, perhaps as a result of an ancient gene duplication. The apo-form of IGPD exists as a catalytically inactive trimer which, in the presence of specific divalent metal cations such as manganese (Mn2+), cobalt (Co2+), cadmium (Cd2+), nickel (Ni2+), iron (Fe2+) and zinc (Zn2+), assembles to form a biologically active high molecular weight metalloenzyme; a 24-mer with 4-3-2 symmetry. Each 24-mer has 24 active sites, and contains around 1.5 metal ions per monomer, each monomer contributing residues to three separate active sites. IGPD enzymes are monofunctional in fungi, plants, archaea and s
Probab=97.31 E-value=0.0006 Score=60.72 Aligned_cols=79 Identities=23% Similarity=0.310 Sum_probs=64.8
Q ss_pred ceEEEEeeeCCeEEEEEEEeCCCceeeeecC----------CccHHHHHHHHHhhcCcceEEE-EecCccccCCccchhh
Q 025280 81 RIGEVKRVTKETNVSVKINVDGSGVADSSTC----------IPFLDHMLDQLASHGLFDVHVR-ATGDIHIDDHHTNEDV 149 (255)
Q Consensus 81 R~a~i~R~TkET~I~v~LnLDG~G~~~I~TG----------IgFlDHML~~~a~Hg~fdL~i~-a~GDl~VD~HHtVEDv 149 (255)
|-+...--=-|+-+.+.|+|.|.+-...+.+ ..-+.|.+..|+.++++.|.|+ .+|+ ++||.+|-+
T Consensus 87 RyG~a~~PMDEal~~v~vDlsGRp~l~~~~~~~~~~iG~~~telv~~Ff~s~a~~a~~tlHi~~~~G~---N~HH~~Ea~ 163 (190)
T cd07914 87 RYGSALVPMDEALARVAVDLSGRPYLVFDAEFPREKIGDFDTELVEEFFRSFANNAGITLHIRVLYGR---NDHHIIEAI 163 (190)
T ss_pred eeEccccccchhheEEEEECCCCCeEEEecCcCcCccCCCChHHHHHHHHHHHhcCCCeEEEEEeecC---ChHHHHHHH
Confidence 4444444567899999999999886555432 2347899999999999999997 7797 789999999
Q ss_pred hhhHHHHHHHhcC
Q 025280 150 GLAIGTALLQALG 162 (255)
Q Consensus 150 GI~LG~Al~~ALG 162 (255)
--+||+||++|+.
T Consensus 164 FKalgrALr~A~~ 176 (190)
T cd07914 164 FKAFARALRQAVA 176 (190)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999995
No 13
>PRK00951 hisB imidazoleglycerol-phosphate dehydratase; Validated
Probab=97.23 E-value=0.00087 Score=59.92 Aligned_cols=79 Identities=20% Similarity=0.266 Sum_probs=65.9
Q ss_pred ceEEEEeeeCCeEEEEEEEeCCCceeeeecCC----------ccHHHHHHHHHhhcCcceEEE-EecCccccCCccchhh
Q 025280 81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCI----------PFLDHMLDQLASHGLFDVHVR-ATGDIHIDDHHTNEDV 149 (255)
Q Consensus 81 R~a~i~R~TkET~I~v~LnLDG~G~~~I~TGI----------gFlDHML~~~a~Hg~fdL~i~-a~GDl~VD~HHtVEDv 149 (255)
|-+...--=-|+-+.+.|++.|.+-...+-+. .-+.|.+..|+.++++.|.|+ ..|+ ++||.+|-+
T Consensus 91 Ryg~a~~PMDEaL~~v~vDlSGRpyl~~~~~~~~~~iG~~~tel~~~Ff~s~a~~a~~tlHi~~~~G~---N~HH~~Ea~ 167 (195)
T PRK00951 91 RYGHAYVPMDEALARVAVDLSGRPYLVFDVEFTREKIGTFDTELVREFFEAFANNAGITLHIRVLYGR---NAHHIIEAL 167 (195)
T ss_pred eeEeeeechhheeEEEEEECCCCCeEEEecCCCccccCCCchHHHHHHHHHHHhcCCCeEEEEecccC---ChHHHHHHH
Confidence 55555556789999999999998865544322 347899999999999999997 6786 789999999
Q ss_pred hhhHHHHHHHhcC
Q 025280 150 GLAIGTALLQALG 162 (255)
Q Consensus 150 GI~LG~Al~~ALG 162 (255)
--++|+||++|+.
T Consensus 168 FKa~g~ALr~A~~ 180 (195)
T PRK00951 168 FKAFARALRMAVE 180 (195)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999994
No 14
>PF00475 IGPD: Imidazoleglycerol-phosphate dehydratase; InterPro: IPR000807 Imidazoleglycerol-phosphate dehydratase is the enzyme that catalyses the seventh step in the biosynthesis of histidine in bacteria, fungi and plants. In most organisms it is a monofunctional protein of about 22 to 29 kD. In some bacteria such as Escherichia coli, it is the C-terminal domain of a bifunctional protein that include a histidinol-phosphatase domain [].; GO: 0004424 imidazoleglycerol-phosphate dehydratase activity, 0000105 histidine biosynthetic process; PDB: 2F1D_G 2AE8_A 1RHY_B.
Probab=96.92 E-value=0.0051 Score=52.86 Aligned_cols=76 Identities=26% Similarity=0.419 Sum_probs=61.1
Q ss_pred CceEEEEeeeCCeEEEEEEEeCCCceeeeecCCc----------cHHHHHHHHHhhcCcceEEEEe-cCccccCCccchh
Q 025280 80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIP----------FLDHMLDQLASHGLFDVHVRAT-GDIHIDDHHTNED 148 (255)
Q Consensus 80 ~R~a~i~R~TkET~I~v~LnLDG~G~~~I~TGIg----------FlDHML~~~a~Hg~fdL~i~a~-GDl~VD~HHtVED 148 (255)
.|-+...----|+-+.+.|++.|++-...+-+.+ -+.|.+..|+.++++.|.|++. |+ ++||.+|=
T Consensus 59 ~Ryg~a~~PMDEaL~~v~vDlsGRp~l~~~~~~~~~~iG~~~~el~~~F~~sla~~~~~tlHi~~~~G~---N~HH~~Ea 135 (145)
T PF00475_consen 59 NRYGSASVPMDEALARVAVDLSGRPYLVFNGEFPREKIGDFDTELVEHFFRSLANNAGITLHIRVLYGE---NDHHIIEA 135 (145)
T ss_dssp --EEEEEEEETTEEEEEEEEESSS-EEEEE---SSSEETTEETTHHHHHHHHHHHHHTEEEEEEEEE-S---SHHHHHHH
T ss_pred eeeeccccchhhhhheeEEEecCCceEEEecccCccccCCCChhhHHHHHHHHHHhCCceEEEEEEeCC---ChHHHHHH
Confidence 3777778888999999999999988665554433 4789999999999999999998 85 67999999
Q ss_pred hhhhHHHHHH
Q 025280 149 VGLAIGTALL 158 (255)
Q Consensus 149 vGI~LG~Al~ 158 (255)
+--++|+||+
T Consensus 136 ~FKa~grALR 145 (145)
T PF00475_consen 136 IFKAFGRALR 145 (145)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9999999986
No 15
>COG0131 HisB Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]
Probab=96.37 E-value=0.0082 Score=53.87 Aligned_cols=71 Identities=24% Similarity=0.327 Sum_probs=57.5
Q ss_pred eCCeEEEEEEEeCCCceeeeecC----------CccHHHHHHHHHhhcCcceEEEE-ecCccccCCccchhhhhhHHHHH
Q 025280 89 TKETNVSVKINVDGSGVADSSTC----------IPFLDHMLDQLASHGLFDVHVRA-TGDIHIDDHHTNEDVGLAIGTAL 157 (255)
Q Consensus 89 TkET~I~v~LnLDG~G~~~I~TG----------IgFlDHML~~~a~Hg~fdL~i~a-~GDl~VD~HHtVEDvGI~LG~Al 157 (255)
--|+-..+.+++.|..-...+-. .--+-|.+..||.|+++.|.+.+ .|+ ++||-+|-+-=++|.||
T Consensus 100 MDEaL~~~~vDlSGRp~lv~~~~f~~~~vG~~~te~v~hFf~sla~~a~itlHi~~~~G~---N~HH~iEa~FKA~arAL 176 (195)
T COG0131 100 MDEALARVAVDLSGRPYLVFNAEFTREKVGDFDTELVEHFFRSLANNAGITLHLSVLYGK---NDHHIIEALFKAFARAL 176 (195)
T ss_pred chhhhheeEEecCCCeeEEEecccCccccCCcchhhHHHHHHHHHHhcCcEEEEEeccCC---ChHHHHHHHHHHHHHHH
Confidence 35788888888888764332211 22467999999999999999999 785 67999999999999999
Q ss_pred HHhcC
Q 025280 158 LQALG 162 (255)
Q Consensus 158 ~~ALG 162 (255)
++|+-
T Consensus 177 r~A~~ 181 (195)
T COG0131 177 RQAVE 181 (195)
T ss_pred HHHhc
Confidence 99984
No 16
>KOG3143 consensus Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]
Probab=86.78 E-value=1.2 Score=40.28 Aligned_cols=73 Identities=29% Similarity=0.384 Sum_probs=60.7
Q ss_pred eCCeEEEEEEEeCCCceeeeecCCc----------cHHHHHHHHHhhcCcceEEEEe-cCccccCCccchhhhhhHHHHH
Q 025280 89 TKETNVSVKINVDGSGVADSSTCIP----------FLDHMLDQLASHGLFDVHVRAT-GDIHIDDHHTNEDVGLAIGTAL 157 (255)
Q Consensus 89 TkET~I~v~LnLDG~G~~~I~TGIg----------FlDHML~~~a~Hg~fdL~i~a~-GDl~VD~HHtVEDvGI~LG~Al 157 (255)
-.|.-+.+.++|.|..-..++-|++ ..-|.|..|+.-+|+-|.|+|- | -++||.+|-.--+|-.|+
T Consensus 123 LDEALsr~vvDLSgRPYav~~Lgl~rekVG~lscemipHfl~Sf~~asgiTLHv~cL~G---kNdHHr~EsaFKalAvAl 199 (219)
T KOG3143|consen 123 LDEALSRVVVDLSGRPYAVYNLGLPREKVGTLSCEMIPHFLQSFVNASGITLHVRCLAG---KNDHHRIESAFKALAVAL 199 (219)
T ss_pred HHHHHhHheeccCCCeeEEEecCCchhhcccchHhhHHHHHHHHHhhcCcEEEEEeecC---CCchhHHHHHHHHHHHHH
Confidence 3466678888888887666777765 5679999999999999999996 4 367999999999999999
Q ss_pred HHhcCCc
Q 025280 158 LQALGDR 164 (255)
Q Consensus 158 ~~ALGdK 164 (255)
++|-..+
T Consensus 200 R~ATsp~ 206 (219)
T KOG3143|consen 200 RQATSPR 206 (219)
T ss_pred HHhcCCC
Confidence 9998654
No 17
>TIGR00321 dhys deoxyhypusine synthase. This family of apparent orthologs has an unusual UPGMA difference tree, in which the members from the archaea M. jannaschii and P. horikoshii cluster with the known eukaryotic deoxyhypusine synthases. Separated by a fairly deep branch, although still strongly related, is a small cluster of proteins from Methanobacterium thermoautotrophicum and Archeoglobus fulgidus, the latter of which has two.
Probab=64.76 E-value=7.2 Score=37.19 Aligned_cols=68 Identities=26% Similarity=0.470 Sum_probs=51.7
Q ss_pred EEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHH-----------HHHHHhcCC
Q 025280 95 SVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIG-----------TALLQALGD 163 (255)
Q Consensus 95 ~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG-----------~Al~~ALGd 163 (255)
.|-|.+-|. -+++|++ ..+..+.+|+.+|+-|+--|-++ ||+.=++| ..|+
T Consensus 47 ~ifLt~tg~---mvsaGlr---~ii~~Li~~g~Vd~ivtTganl~-------hD~~~~~g~~~~g~f~~dd~~Lr----- 108 (301)
T TIGR00321 47 TIFMGYAGN---LVPSGMR---EIIAYLIQHGMIDALVTTGANLE-------HDLIEALGPTHLGDFAVDDKKLR----- 108 (301)
T ss_pred eEEEEeccc---cchhhHH---HHHHHHHHcCCeeEEEeCCCchH-------HHHHHHcCcccccCCCCChHHHH-----
Confidence 335555453 4788887 88999999999999999888765 56666664 3333
Q ss_pred ccccceecceecccccce
Q 025280 164 RKGINRFGDFTAPLDEAL 181 (255)
Q Consensus 164 K~GI~RyG~a~vPMDEAL 181 (255)
++||+|-|.-++|- |++
T Consensus 109 ~~ginRI~dv~ip~-e~y 125 (301)
T TIGR00321 109 EEGINRIGDVFVPN-ENF 125 (301)
T ss_pred HcCCCccceecCCH-HHH
Confidence 68999999999995 655
No 18
>PRK02492 deoxyhypusine synthase-like protein; Provisional
Probab=58.92 E-value=7.6 Score=37.74 Aligned_cols=70 Identities=24% Similarity=0.238 Sum_probs=52.2
Q ss_pred eEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCc-cccCCccchhhhhhHH------------HHHH
Q 025280 92 TNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDI-HIDDHHTNEDVGLAIG------------TALL 158 (255)
Q Consensus 92 T~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl-~VD~HHtVEDvGI~LG------------~Al~ 158 (255)
.+..+-|.+-|. -+++|++ ..+..+.+|+.+|+-|+--|-+ + ||+.=++| ..|+
T Consensus 57 ~~~~ifL~~tga---mvsaGlr---~~i~~Li~~~~VD~iVTTganl~e-------eD~~k~~g~~~y~G~f~~dd~~Lr 123 (347)
T PRK02492 57 KECAVILTLAGS---LSSAGCM---QVYIDLVRNNMVDAIVATGANIVD-------QDFFEALGFKHYQGSPFVDDAVLR 123 (347)
T ss_pred CCCeEEEEeccc---hHHHHHH---HHHHHHHHcCCeeEEEECCCCchH-------HHHHHHcCCCeecCCCCCCHHHHH
Confidence 344445655553 4789987 7999999999999999887754 3 56665665 3444
Q ss_pred HhcCCccccceecceeccccc
Q 025280 159 QALGDRKGINRFGDFTAPLDE 179 (255)
Q Consensus 159 ~ALGdK~GI~RyG~a~vPMDE 179 (255)
++||+|-|..++|-|+
T Consensus 124 -----~~ginRIgdv~ip~e~ 139 (347)
T PRK02492 124 -----DLYIDRIYDTYIDEEE 139 (347)
T ss_pred -----HcCCCcccccccChHH
Confidence 6799999999999655
No 19
>PRK02301 putative deoxyhypusine synthase; Provisional
Probab=56.33 E-value=8.3 Score=37.04 Aligned_cols=76 Identities=25% Similarity=0.349 Sum_probs=54.5
Q ss_pred CeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHH--------HHhcC
Q 025280 91 ETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTAL--------LQALG 162 (255)
Q Consensus 91 ET~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al--------~~ALG 162 (255)
+.+..+-|.+-|. -+++|++ -.+..|.+|+.+|+-|+--|-++ ||+.=++|.-. .+.|
T Consensus 55 ~~~~~ifL~~tg~---mvsaGlr---~ii~~Li~~~~VD~iVtTganie-------hD~~~~lg~~~y~G~~~~dd~~L- 120 (316)
T PRK02301 55 DDDVTKFFGLAGA---MVPAGMR---GIVSDLIRDGHIDVLVTTGANLT-------HDVIEAIGGHHHHGTAHAHDEEL- 120 (316)
T ss_pred CCCCeEEEEcccc---hhHHHHH---HHHHHHHHcCCeeEEEcCCCchH-------HHHHHHcCCCeeccCCCCCHHHH-
Confidence 3444556666553 4788887 89999999999999999888765 67777776111 1111
Q ss_pred Cccccceecceecccccce
Q 025280 163 DRKGINRFGDFTAPLDEAL 181 (255)
Q Consensus 163 dK~GI~RyG~a~vPMDEAL 181 (255)
-++||+|-|.-++|- |++
T Consensus 121 r~~ginRIgd~~ip~-e~y 138 (316)
T PRK02301 121 RDEGIDRIYDVYLPQ-EHF 138 (316)
T ss_pred HHcCCCccceeCCCh-HHH
Confidence 167999999999995 555
No 20
>PRK00805 putative deoxyhypusine synthase; Provisional
Probab=56.29 E-value=8.6 Score=37.13 Aligned_cols=75 Identities=21% Similarity=0.290 Sum_probs=53.8
Q ss_pred eEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHH--------HHhcCC
Q 025280 92 TNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTAL--------LQALGD 163 (255)
Q Consensus 92 T~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al--------~~ALGd 163 (255)
.+-.|-|.+-|. -+++|++ ..+..+.+|+.+|+-|+--|-++ ||+.=++|.-. .+.| -
T Consensus 45 ~~~~ifL~~tg~---mvsaGlr---~~i~~Li~~g~VD~iVTTgani~-------hD~~~~lg~~~y~g~f~~dd~~L-r 110 (329)
T PRK00805 45 PDNTIFMGLSGA---MVPAGMR---KIIKWLIRNRYVDVLVSTGANIF-------HDIHEALGFKHYKGSHHVDDEEL-F 110 (329)
T ss_pred CCCeEEEEeccc---hHHHHHH---HHHHHHHHcCCeeEEEeCCCchH-------HHHHHHcCCCeeccCCCCCHHHH-H
Confidence 344445555553 4788887 79999999999999999988764 67777776111 1111 1
Q ss_pred ccccceecceecccccce
Q 025280 164 RKGINRFGDFTAPLDEAL 181 (255)
Q Consensus 164 K~GI~RyG~a~vPMDEAL 181 (255)
++||+|-|..++|- |++
T Consensus 111 ~~ginRIgdv~ip~-e~y 127 (329)
T PRK00805 111 KEGIDRIYDVFAYE-EEF 127 (329)
T ss_pred HcCCCcccccccCH-HHH
Confidence 67999999999995 555
No 21
>PRK03971 putative deoxyhypusine synthase; Provisional
Probab=55.39 E-value=12 Score=36.31 Aligned_cols=73 Identities=26% Similarity=0.405 Sum_probs=53.7
Q ss_pred eEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHHHHhcCC--------
Q 025280 92 TNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGD-------- 163 (255)
Q Consensus 92 T~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al~~ALGd-------- 163 (255)
.+-.|-|.+-|. -++||++ -.+..|.+|+.+|+-|.--|-++ ||+.=++|.- . +|+
T Consensus 65 ~~~~ifL~~tg~---misaGlr---~~i~~Li~~~~Vd~iVtTganle-------hDi~~~l~~~-~--~G~f~~dd~~L 128 (334)
T PRK03971 65 EEATVFLGYTSN---IVSSGLR---EIIAYLVKEKKVDVIVTTAGGVE-------EDFIKCLKPF-I--LGEWDVDGAEL 128 (334)
T ss_pred CCCeEEEEcccc---ccchhHH---HHHHHHHHcCCeeEEEeCCCchH-------HHHHHHhccc-c--cCCCCCCHHHH
Confidence 344445555553 4788987 89999999999999999888765 6777777621 1 333
Q ss_pred -ccccceecceecccccce
Q 025280 164 -RKGINRFGDFTAPLDEAL 181 (255)
Q Consensus 164 -K~GI~RyG~a~vPMDEAL 181 (255)
++||+|.|.-++|-| ++
T Consensus 129 r~~ginRIgnv~ip~e-~y 146 (334)
T PRK03971 129 REKGINRIGNIFVPND-RY 146 (334)
T ss_pred HHcCCCccceeeeChH-HH
Confidence 689999999999965 44
No 22
>PRK01221 putative deoxyhypusine synthase; Provisional
Probab=54.23 E-value=2.9 Score=39.99 Aligned_cols=72 Identities=22% Similarity=0.406 Sum_probs=52.9
Q ss_pred EEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHH--------HHhcCCccc
Q 025280 95 SVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTAL--------LQALGDRKG 166 (255)
Q Consensus 95 ~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al--------~~ALGdK~G 166 (255)
.+-|.+-|. -|+||+ -..+..|.+|+.+|+-|+--|-++ ||+.=+||... ...| -++|
T Consensus 56 ~ifL~~tg~---mvs~Gl---r~ii~~Li~~~~VD~iVtTgani~-------hD~~~~lg~~~y~G~~~~dd~~L-r~~G 121 (312)
T PRK01221 56 LRFLSFTAN---LVSTGL---RGLIADLIKRGLFNVVITTCGTLD-------HDIARSFGGVYYKGSFDIDDAML-KDLG 121 (312)
T ss_pred eEEEEecch---hHHHHH---HHHHHHHHHcCCeeEEEeCCCchH-------HHHHHHcCCCeEecCCCCChHHH-HHcC
Confidence 556666553 468885 499999999999999999988765 67777775411 1111 2679
Q ss_pred cceecceecccccc
Q 025280 167 INRFGDFTAPLDEA 180 (255)
Q Consensus 167 I~RyG~a~vPMDEA 180 (255)
|+|-|..++|-|+-
T Consensus 122 inRIgdv~ip~e~y 135 (312)
T PRK01221 122 IHRLGNVLIPVESY 135 (312)
T ss_pred CCcceeeccChHHH
Confidence 99999999997664
No 23
>KOG3414 consensus Component of the U4/U6.U5 snRNP/mitosis protein DIM1 [RNA processing and modification; Cell cycle control, cell division, chromosome partitioning]
Probab=48.09 E-value=8.1 Score=33.44 Aligned_cols=38 Identities=32% Similarity=0.312 Sum_probs=28.5
Q ss_pred HHHHHHhcCC---ccccceecce----ecccccceeEEEEEcCCC
Q 025280 154 GTALLQALGD---RKGINRFGDF----TAPLDEALIHVSLDLSGR 191 (255)
Q Consensus 154 G~Al~~ALGd---K~GI~RyG~a----~vPMDEALa~vavDlSGR 191 (255)
|.+.+||+++ |-=+-|||.- -+-|||.|+..+.|+|+=
T Consensus 11 ~~~VdqaI~~t~~rlvViRFGr~~Dp~C~~mD~~L~~i~~~vsnf 55 (142)
T KOG3414|consen 11 GWEVDQAILSTEERLVVIRFGRDWDPTCMKMDELLSSIAEDVSNF 55 (142)
T ss_pred HHHHHHHHhcccceEEEEEecCCCCchHhhHHHHHHHHHHHHhhc
Confidence 5677777765 4446799953 366999999999999873
No 24
>COG1899 DYS1 Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones]
Probab=47.20 E-value=9.7 Score=36.85 Aligned_cols=82 Identities=30% Similarity=0.485 Sum_probs=58.7
Q ss_pred EEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHH-H-----
Q 025280 84 EVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTA-L----- 157 (255)
Q Consensus 84 ~i~R~TkET~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~A-l----- 157 (255)
+|-|+-.|-++.+-|.+-|+ -|+||+ -+.+..+-+++.+|+-|+--|-++ ||+.=+||-. +
T Consensus 45 ~I~~~m~~~~~tvfl~~tg~---~vssGl---R~iia~LIr~~~idvvVTTgg~l~-------hDi~~~lg~~~~~G~~~ 111 (318)
T COG1899 45 EILREMLESRVTVFLGLTGN---LVSSGL---REIIADLIRNGLIDVVVTTGGNLD-------HDIIKALGGPHYCGSFE 111 (318)
T ss_pred HHHHHHHhhcCEEEEecccc---ccchhH---HHHHHHHHHcCCeEEEEecCCchh-------HHHHHHcCCCeeccCcC
Confidence 34444444445566666553 478887 699999999999999999998654 8888888811 1
Q ss_pred --HHhcCCccccceecceeccccc
Q 025280 158 --LQALGDRKGINRFGDFTAPLDE 179 (255)
Q Consensus 158 --~~ALGdK~GI~RyG~a~vPMDE 179 (255)
...|- ..||+|-|..++|-|+
T Consensus 112 ~dD~~Lr-~~gi~RIgnv~vp~e~ 134 (318)
T COG1899 112 VDDVELR-EEGINRIGNVFVPNEE 134 (318)
T ss_pred CCHHHHH-HhccccccceecChHH
Confidence 11221 4699999999999765
No 25
>PRK00770 deoxyhypusine synthase-like protein; Provisional
Probab=42.47 E-value=22 Score=35.00 Aligned_cols=72 Identities=22% Similarity=0.334 Sum_probs=52.6
Q ss_pred eEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHH------------HHHHH
Q 025280 92 TNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIG------------TALLQ 159 (255)
Q Consensus 92 T~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG------------~Al~~ 159 (255)
.+..|-|.+-|. -|++|++- -.|..|.+|+.+|.-|.--|-++ ||+..+|| ..|+
T Consensus 50 ~~~tvfLtltga---misaGLr~--~ii~~LIr~g~VD~IVTTGAnl~-------hD~~~alg~~~y~G~~~~dd~~Lr- 116 (384)
T PRK00770 50 DGVTVGLTLSGA---MTPAGFGV--SALAPLIEAGFIDWIISTGANLY-------HDLHYALGLPLFAGHPFVDDVKLR- 116 (384)
T ss_pred cCCcEEEEeccc---hhhhhcCh--HHHHHHHHcCCccEEEcCCccHH-------HHHHHHhCCCcccCCCCCCHHHHH-
Confidence 334445555553 57888840 27889999999999998888654 79988885 3333
Q ss_pred hcCCccccceecceecccccc
Q 025280 160 ALGDRKGINRFGDFTAPLDEA 180 (255)
Q Consensus 160 ALGdK~GI~RyG~a~vPMDEA 180 (255)
++||+|-|..++|-|+.
T Consensus 117 ----~~GinRI~dv~ip~e~~ 133 (384)
T PRK00770 117 ----EEGIIRIYDIIFDYDVL 133 (384)
T ss_pred ----HcCCCcccccCcChHHH
Confidence 67999999999996554
No 26
>COG2100 Predicted Fe-S oxidoreductase [General function prediction only]
Probab=42.45 E-value=72 Score=31.86 Aligned_cols=112 Identities=23% Similarity=0.395 Sum_probs=81.3
Q ss_pred EEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcce-EEEEecCccccCCccchhhhhhHHHHHHHhcCCccccceecce
Q 025280 95 SVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDV-HVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDF 173 (255)
Q Consensus 95 ~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fdL-~i~a~GDl~VD~HHtVEDvGI~LG~Al~~ALGdK~GI~RyG~a 173 (255)
-++.-|||+|+ -+=-||+--++.++..|-+.++ +++..| -.|-.-+-++|. +.|+.|+.-.
T Consensus 160 glEaHlDGqGE---P~lYP~l~~lVqalk~~~~v~vVSmQTng--------------~~L~~~lv~eLe-eAGLdRiNlS 221 (414)
T COG2100 160 GLEAHLDGQGE---PLLYPHLVDLVQALKEHKGVEVVSMQTNG--------------VLLSKKLVDELE-EAGLDRINLS 221 (414)
T ss_pred CeEEEecCCCC---CccchhHHHHHHHHhcCCCceEEEEeeCc--------------eeccHHHHHHHH-HhCCceEEee
Confidence 36677899997 4557888899999999977764 344444 334455555553 5699999988
Q ss_pred ecccccceeEEEEEcCCCceeEEeccCCcceecccccccHHHHHHHHHHhcCCeEEEE--ecccCChhHHH
Q 025280 174 TAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIR--QLKRGSTTILI 242 (255)
Q Consensus 174 ~vPMDEALa~vavDlSGRpylv~~~~f~~~~iG~f~teLv~eFf~sfa~~a~~TLHI~--~l~G~N~HH~i 242 (255)
+=-+|+.+|.. |.|| -+||.+-|.|--+.+++ ++|.+=|. .+-|-|+-.+.
T Consensus 222 v~aLDpk~Ak~---L~G~--------------~dYdv~kvle~aE~i~~-a~idvlIaPv~lPG~ND~E~~ 274 (414)
T COG2100 222 VDALDPKLAKM---LAGR--------------KDYDVKKVLEVAEYIAN-AGIDVLIAPVWLPGVNDDEMP 274 (414)
T ss_pred cccCCHHHHHH---hcCc--------------cccCHHHHHHHHHHHHh-CCCCEEEeeeecCCcChHHHH
Confidence 88888888754 2333 26788889999898888 99998875 45799997643
No 27
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=36.02 E-value=71 Score=26.43 Aligned_cols=46 Identities=24% Similarity=0.283 Sum_probs=37.4
Q ss_pred ccHHHHHHHHHhhcCcceEEEEecCccccCCccchhhhhhHHHHHHH
Q 025280 113 PFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQ 159 (255)
Q Consensus 113 gFlDHML~~~a~Hg~fdL~i~a~GDl~VD~HHtVEDvGI~LG~Al~~ 159 (255)
|..+.+|..++.-|-=.+.|-+-|=+ .|..||.+|+.+-+.+.+.+
T Consensus 77 P~~~~~l~~l~~~G~~~i~v~p~gF~-~D~~Etl~di~~e~~~~~~~ 122 (135)
T cd00419 77 PSTDDALEELAKEGVKNVVVVPIGFV-SDHLETLYELDIEYRELAEE 122 (135)
T ss_pred CCHHHHHHHHHHcCCCeEEEECCccc-cccHHHHHHHHHHHHHHHHH
Confidence 66889999999998778888887732 45569999999999987764
No 28
>PF09918 DUF2148: Uncharacterized protein containing a ferredoxin domain (DUF2148); InterPro: IPR019224 This domain, found in various hypothetical bacterial and archaeal proteins containing a ferredoxin domain, has no known function.
Probab=31.00 E-value=31 Score=26.72 Aligned_cols=16 Identities=38% Similarity=0.596 Sum_probs=14.0
Q ss_pred chhhhhhHHHHHHHhc
Q 025280 146 NEDVGLAIGTALLQAL 161 (255)
Q Consensus 146 VEDvGI~LG~Al~~AL 161 (255)
.=|+||+||.|.+.|-
T Consensus 11 ~~DLGIAlgSAv~~A~ 26 (69)
T PF09918_consen 11 AIDLGIALGSAVKTAS 26 (69)
T ss_pred ccchhHHHHHHHHHHH
Confidence 4699999999999875
No 29
>PF13558 SbcCD_C: Putative exonuclease SbcCD, C subunit; PDB: 3QG5_B 3QF7_A 3THO_A 3EUK_H 3EUJ_A 3AV0_B 3AUY_B 3AUX_A.
Probab=29.41 E-value=29 Score=26.56 Aligned_cols=33 Identities=27% Similarity=0.179 Sum_probs=24.6
Q ss_pred hhhhHHHHHHHhcCCccccceecceeccccccee
Q 025280 149 VGLAIGTALLQALGDRKGINRFGDFTAPLDEALI 182 (255)
Q Consensus 149 vGI~LG~Al~~ALGdK~GI~RyG~a~vPMDEALa 182 (255)
+.++|.-|+...++...| ++-+.-++.+|||..
T Consensus 42 ~~l~l~aal~~~~~~~~~-~~~~~~~l~lDEaF~ 74 (90)
T PF13558_consen 42 FYLALAAALAALYSSSSG-RGDSPRLLFLDEAFS 74 (90)
T ss_dssp HHHHHHHHHHHHHHTTST-S-TTBSEEEEESTTT
T ss_pred HHHHHHHHHHHHHhhhcC-CCCCcCEEEEeCCCC
Confidence 678888999999988765 444555788999863
No 30
>PF10747 DUF2522: Protein of unknown function (DUF2522); InterPro: IPR019683 This entry represents the Sporulation inhibitor of replication (sirA) family of proteins from Bacillus sp. Induction of sporulation in rapidly growing cells inhibits replication; this is thought to be through the action of SirA protein and independent of phosphorylated Spo0A; however SirA protein synthesis is induced by Spo0A [].
Probab=28.23 E-value=1.9e+02 Score=25.09 Aligned_cols=69 Identities=29% Similarity=0.384 Sum_probs=47.6
Q ss_pred hHHHHHHHhcCCccccceecceec--ccccceeEEEEEcCCCceeEEeccCCcceecccccccHHHHHHHHHHhcCCeEE
Q 025280 152 AIGTALLQALGDRKGINRFGDFTA--PLDEALIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLVNTSGMTLH 229 (255)
Q Consensus 152 ~LG~Al~~ALGdK~GI~RyG~a~v--PMDEALa~vavDlSGRpylv~~~~f~~~~iG~f~teLv~eFf~sfa~~a~~TLH 229 (255)
-|=+.|.++|..+.|..|.|..+. |-+..- +.|=+-.|--. -..-|+++.|.+ ||++|..-..+-|=
T Consensus 56 ~l~~~L~q~ls~~~~~~~~~n~~~L~~~~k~~--a~l~i~~~~i~-------l~~~Gs~~aet~--~FevLrk~~~~FlA 124 (142)
T PF10747_consen 56 KLHQRLKQALSGKKGYNREGNTYRLLPNEKGE--AALYIKDRRIQ-------LNCSGSYDAETD--FFEVLRKISPCFLA 124 (142)
T ss_pred HHHHHHHHHhcccCCeEeeccEEEEEeCCCce--EEEEEEccEEE-------EEecCCHHHHHH--HHHHHHhCCCceEE
Confidence 356789999999999999998654 333333 33333223222 123588898887 99999999998886
Q ss_pred EE
Q 025280 230 IR 231 (255)
Q Consensus 230 I~ 231 (255)
++
T Consensus 125 vd 126 (142)
T PF10747_consen 125 VD 126 (142)
T ss_pred Ee
Confidence 65
No 31
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=27.00 E-value=69 Score=27.52 Aligned_cols=30 Identities=30% Similarity=0.408 Sum_probs=24.9
Q ss_pred CCceeeeecCCccHHHHHHHHHhhcCcceEEE
Q 025280 102 GSGVADSSTCIPFLDHMLDQLASHGLFDVHVR 133 (255)
Q Consensus 102 G~G~~~I~TGIgFlDHML~~~a~Hg~fdL~i~ 133 (255)
+.|+ .++-|||||--.-..|++|| ||+...
T Consensus 13 ~~gk-VvEVGiG~~~~VA~~L~e~g-~dv~at 42 (129)
T COG1255 13 ARGK-VVEVGIGFFLDVAKRLAERG-FDVLAT 42 (129)
T ss_pred cCCc-EEEEccchHHHHHHHHHHcC-CcEEEE
Confidence 4554 47999999999999999999 887654
No 32
>PRK00132 rpsI 30S ribosomal protein S9; Reviewed
Probab=25.27 E-value=1.5e+02 Score=25.08 Aligned_cols=51 Identities=29% Similarity=0.391 Sum_probs=33.3
Q ss_pred EEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHH---------H---HHHHHhhcCcceEEEEecC
Q 025280 83 GEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDH---------M---LDQLASHGLFDVHVRATGD 137 (255)
Q Consensus 83 a~i~R~TkET~I~v~LnLDG~G~~~I~TGIgFlDH---------M---L~~~a~Hg~fdL~i~a~GD 137 (255)
+.-.|||.=..+.+. .|+|+..|+ |.++.+. + |...-..+.||+.++++|=
T Consensus 8 ~~GrRK~a~A~v~l~---~G~G~i~IN-g~~~~~yf~~~~~r~~i~~Pl~~~~~~~~~Di~i~V~GG 70 (130)
T PRK00132 8 GTGRRKTAVARVRLK---PGSGKITVN-GRDLEEYFPRETLRMVVRQPLELTETEGKFDVYVTVKGG 70 (130)
T ss_pred EEeeCCCeEEEEEEE---cCccEEEEC-CEeHHHHcCCHHHHHHHHHHHHHhCccCceeEEEEEEcC
Confidence 456677654444443 799998876 6664442 1 2333357899999999983
No 33
>cd01209 SHC SHC phosphotyrosine-binding (PTB) domain. SHC phosphotyrosine-binding (PTB) domain. SHC is a substrate for receptor tyrosine kinases, which can interact with phosphoproteins at NPXY motifs. SHC contains an PTB domain followed by an SH2 domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=24.53 E-value=33 Score=30.22 Aligned_cols=71 Identities=13% Similarity=0.083 Sum_probs=40.3
Q ss_pred CCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcc--e----EEEEe-cCccccCC------ccchhhhhhHHHH
Q 025280 90 KETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFD--V----HVRAT-GDIHIDDH------HTNEDVGLAIGTA 156 (255)
Q Consensus 90 kET~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fd--L----~i~a~-GDl~VD~H------HtVEDvGI~LG~A 156 (255)
..|+|++.+.-+|=-...++|+--..||=|..++.=++-| . .--|+ .|-+--.| -+.+||..+||||
T Consensus 73 ~~~~V~l~IS~~~v~~~~~~t~~ii~~H~l~~ISfaa~gd~d~~~~~ayIAKd~~~~r~ChVf~~~~~lAq~Ii~TIGQA 152 (160)
T cd01209 73 AGMPITINVSSSSLNLMAQDCKQIIANHHMQSISFASGGDPDTAEYVAYIAKNPDNQRACHVLECPEGLAQDLISTIGQA 152 (160)
T ss_pred cCceEEEEEEeeEEEEeccCchhHHhcCCCcceEEEeCCCCCcceeEEEEEcCCCCCceeEEEEcCCchHHHHHHHHHHH
Confidence 4566777776665556677787766666666655555311 1 11112 11000011 2478999999999
Q ss_pred HHHh
Q 025280 157 LLQA 160 (255)
Q Consensus 157 l~~A 160 (255)
|.=|
T Consensus 153 F~la 156 (160)
T cd01209 153 FELR 156 (160)
T ss_pred HHHH
Confidence 9854
No 34
>PF14433 SUKH-3: SUKH-3 immunity protein
Probab=24.24 E-value=1.6e+02 Score=24.04 Aligned_cols=95 Identities=20% Similarity=0.263 Sum_probs=57.6
Q ss_pred CCccHHHHHHHHHhhcCcceEEEE-------ecCccccCCccch-hhhhhHHHHHHHhcCCccccceecceecccccc--
Q 025280 111 CIPFLDHMLDQLASHGLFDVHVRA-------TGDIHIDDHHTNE-DVGLAIGTALLQALGDRKGINRFGDFTAPLDEA-- 180 (255)
Q Consensus 111 GIgFlDHML~~~a~Hg~fdL~i~a-------~GDl~VD~HHtVE-DvGI~LG~Al~~ALGdK~GI~RyG~a~vPMDEA-- 180 (255)
|.+-|+.-..-|+.+||+.+.... ..+..+|..+..- +..-.+. .+.+++|.+ ++|.-+.
T Consensus 32 g~~~~paa~~fL~efGgL~i~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~-~~~~~~~~~---------l~PiG~~~~ 101 (142)
T PF14433_consen 32 GYPVFPAAVEFLAEFGGLRINPSGPYGRQDAPSDFDFDPLEALGIHDAETLA-ELEEALGTK---------LFPIGEEHD 101 (142)
T ss_pred CCCCCHHHHHHHHHcCCeEEeccCccccccCCceEEeChhhhcccchHHHHH-HHHHHhCCc---------EEEEEEecC
Confidence 888899999999999999996433 3566777766431 1122222 233334433 4554443
Q ss_pred -eeEEEEEcCCCceeEEeccCCcceecccccccHHHHHHHHH
Q 025280 181 -LIHVSLDLSGRPHLNYDLQIPTQRVGTYDTQLVEHFFQSLV 221 (255)
Q Consensus 181 -La~vavDlSGRpylv~~~~f~~~~iG~f~teLv~eFf~sfa 221 (255)
=+.++||-+||-|...+.. .-++| +.+.+.+..|.
T Consensus 102 ~~~~l~ide~Grvy~~~~~~--~~~lG----~~~~~al~~Li 137 (142)
T PF14433_consen 102 GHAILAIDESGRVYGLDDTG--LWYLG----DDIDEALENLI 137 (142)
T ss_pred CCEEEEEeCCCCEEEecCCe--eEEeC----CCHHHHHHHHH
Confidence 3568899999999877641 12334 34555555554
No 35
>PF09974 DUF2209: Uncharacterized protein conserved in archaea (DUF2209); InterPro: IPR014514 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=23.36 E-value=35 Score=29.29 Aligned_cols=19 Identities=26% Similarity=0.134 Sum_probs=12.2
Q ss_pred cccHHHHHHHHHHhcCCeE
Q 025280 210 TQLVEHFFQSLVNTSGMTL 228 (255)
Q Consensus 210 teLv~eFf~sfa~~a~~TL 228 (255)
+++++++...+.....-++
T Consensus 54 v~~v~e~v~~~~~~~eg~I 72 (128)
T PF09974_consen 54 VQEVEEAVSKLSEDFEGTI 72 (128)
T ss_pred HHHHHHHHhccccccCceE
Confidence 5667777777765555554
No 36
>COG4324 Predicted aminopeptidase [General function prediction only]
Probab=23.09 E-value=39 Score=32.87 Aligned_cols=43 Identities=26% Similarity=0.425 Sum_probs=32.7
Q ss_pred HHHHHhcCCccccceecceeccc-ccceeEEEEEcCCCceeEEec
Q 025280 155 TALLQALGDRKGINRFGDFTAPL-DEALIHVSLDLSGRPHLNYDL 198 (255)
Q Consensus 155 ~Al~~ALGdK~GI~RyG~a~vPM-DEALa~vavDlSGRpylv~~~ 198 (255)
..|++-|-+.+.|+||.+--+-+ |..--++-.|| ||||.+|++
T Consensus 78 ~rLr~rL~~A~aiR~fAseeL~LPDN~SYR~YadI-gRp~vvwnV 121 (376)
T COG4324 78 ERLRARLTSASAIRRFASEELALPDNSSYRSYADI-GRPDVVWNV 121 (376)
T ss_pred HHHHHHHhhHHHHHHHHHHhccCCCCcceeeeecc-CCcceeeee
Confidence 46777777888899999753332 45556788899 899999996
No 37
>cd04483 hOBFC1_like hOBFC1_like: A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be involved in all aspects of DNA metabolism including replication, recombination, and repair. RPA also mediates specific interactions of various nuclear proteins. In animals, plants, and fungi, RPA is a heterotrimer with subunits of 70KDa (RPA1), 32kDa (RPA2), and 14 KDa (RPA3). The OB fold domain of RPA2 has dual roles in ssDNA binding and trimerization.
Probab=22.92 E-value=1.2e+02 Score=23.70 Aligned_cols=21 Identities=43% Similarity=0.637 Sum_probs=16.7
Q ss_pred EEeeeCCeEEEEEEEeCCCcee
Q 025280 85 VKRVTKETNVSVKINVDGSGVA 106 (255)
Q Consensus 85 i~R~TkET~I~v~LnLDG~G~~ 106 (255)
+.+++++|.+..+|+ ||+|..
T Consensus 7 ~sv~~~~~~~~~tLd-DgTG~I 27 (92)
T cd04483 7 VSRRERETFYSFGVD-DGTGVV 27 (92)
T ss_pred EEEEecCCeEEEEEe-cCCceE
Confidence 456788899888887 899964
No 38
>PF03719 Ribosomal_S5_C: Ribosomal protein S5, C-terminal domain; InterPro: IPR005324 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This is a family of proteins related to the 30S ribosomal protein S5P from Sulfolobus acidocaldarius (O05641 from SWISSPROT). Ribosomal protein S5 is one of the proteins from the small ribosomal subunit. In Escherichia coli, S5 is known to be important in the assembly and function of the 30S ribosomal subunit. Mutations in S5 have been shown to increase translational error frequencies.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2XZN_E 2XZM_E 2WDK_E 3KNJ_E 3HUY_E 2B9M_E 2Y18_E 1XMQ_E 1IBM_E 3TVF_H ....
Probab=22.59 E-value=1.7e+02 Score=22.26 Aligned_cols=35 Identities=6% Similarity=0.151 Sum_probs=26.9
Q ss_pred HHHHHHHhcCCe-EEEEecccCChhHHHHHHHHHhh
Q 025280 216 FFQSLVNTSGMT-LHIRQLKRGSTTILILHGIHGLG 250 (255)
Q Consensus 216 Ff~sfa~~a~~T-LHI~~l~G~N~HH~iEA~FKAlG 250 (255)
-.+.+.+-+|++ +..++.--.|.+..+-|.|+||-
T Consensus 26 ~vr~il~laGI~Dv~~K~~Gs~n~~n~v~A~~~aL~ 61 (74)
T PF03719_consen 26 AVRAILELAGIKDVYAKSRGSRNPINVVKATFKALK 61 (74)
T ss_dssp HHHHHHHHTTESSEEEEEESBSSHHHHHHHHHHHHH
T ss_pred hHHHHHHhcccccEEeeccCCCChhhHHHHHHHHHH
Confidence 456677778874 66665555699999999999985
No 39
>cd01273 CED-6 CED-6 Phosphotyrosine-binding (PTB) domain. CED-6 Phosphotyrosine-binding (PTB) domain. CED6 is an adaptor protein involved in the engulfment of apoptotic cells. It has a C-terminal PTB domain, which can bind to NPXY motifs. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=22.46 E-value=52 Score=27.41 Aligned_cols=69 Identities=25% Similarity=0.341 Sum_probs=37.9
Q ss_pred eEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcc---eEE--EEecC-----cc----ccCCccchhhhhhHHHHH
Q 025280 92 TNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFD---VHV--RATGD-----IH----IDDHHTNEDVGLAIGTAL 157 (255)
Q Consensus 92 T~I~v~LnLDG~G~~~I~TGIgFlDHML~~~a~Hg~fd---L~i--~a~GD-----l~----VD~HHtVEDvGI~LG~Al 157 (255)
++|.+++..+|=-..+.+|+-...+|=|..++.=+. | .++ -...| -+ .+.-...|||..++||||
T Consensus 55 ~~V~L~IS~~GI~v~d~~t~~~~~~~~i~~ISfca~-d~~~~r~FayIak~~~~~~~~~ChvF~s~~~A~~I~~tigqAF 133 (142)
T cd01273 55 QKVEIRISIDGVIIAEPKTKAPMHTFPLGRISFCAD-DKDDKRMFSFIAKAEGASGKHSCFVFTSEKLAEDITLTIGQAF 133 (142)
T ss_pred cEEEEEEECCeEEEEEcCCCcEEEEcCcceEEEEec-CCCCCeEEEEEecCCCCCCcEEEEEEeccchHHHHHHHHHHHH
Confidence 566677766665555666776666666555443221 1 000 00000 00 111246899999999999
Q ss_pred HHhc
Q 025280 158 LQAL 161 (255)
Q Consensus 158 ~~AL 161 (255)
.-|.
T Consensus 134 ~~ay 137 (142)
T cd01273 134 DLAY 137 (142)
T ss_pred HHHH
Confidence 8764
Done!