Query 025282
Match_columns 255
No_of_seqs 244 out of 1742
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 04:16:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025282.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025282hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1330 Sugar transporter/spin 99.9 1.7E-26 3.7E-31 194.0 9.0 188 42-246 26-215 (493)
2 TIGR02332 HpaX 4-hydroxyphenyl 99.9 4.4E-25 9.4E-30 191.4 17.2 181 47-244 6-193 (412)
3 COG2814 AraJ Arabinose efflux 99.9 4.4E-24 9.6E-29 179.4 19.6 155 87-241 34-189 (394)
4 PRK14995 methyl viologen resis 99.9 3.4E-24 7.4E-29 189.9 17.9 181 47-244 4-186 (495)
5 PRK03545 putative arabinose tr 99.9 3.6E-23 7.7E-28 178.1 18.3 156 88-243 31-187 (390)
6 TIGR00903 2A0129 major facilit 99.9 1.3E-23 2.7E-28 179.4 14.8 161 85-246 10-171 (368)
7 PRK10213 nepI ribonucleoside t 99.9 1E-22 2.3E-27 175.5 19.6 157 88-244 42-199 (394)
8 TIGR01299 synapt_SV2 synaptic 99.9 3.1E-23 6.8E-28 189.1 16.6 184 47-248 165-362 (742)
9 COG2271 UhpC Sugar phosphate p 99.9 3.2E-24 7E-29 178.8 8.9 183 46-245 26-211 (448)
10 PRK11663 regulatory protein Uh 99.9 6.1E-23 1.3E-27 179.1 15.1 180 48-244 22-202 (434)
11 PRK11551 putative 3-hydroxyphe 99.9 1.8E-22 3.9E-27 174.4 17.3 183 46-245 12-195 (406)
12 PRK15403 multidrug efflux syst 99.9 3.8E-22 8.2E-27 173.0 19.0 160 85-244 35-195 (413)
13 PRK09556 uhpT sugar phosphate 99.9 1.6E-23 3.6E-28 184.3 9.5 180 47-243 27-215 (467)
14 PRK10091 MFS transport protein 99.9 3.8E-22 8.2E-27 171.4 17.2 157 88-244 25-182 (382)
15 TIGR00891 2A0112 putative sial 99.9 3.2E-22 6.9E-27 172.2 16.2 181 46-244 9-192 (405)
16 TIGR00711 efflux_EmrB drug res 99.9 2.2E-22 4.8E-27 177.6 15.2 177 50-243 3-180 (485)
17 TIGR00710 efflux_Bcr_CflA drug 99.9 7.1E-22 1.5E-26 169.1 17.6 158 87-244 26-184 (385)
18 PRK10406 alpha-ketoglutarate t 99.9 4.8E-22 1E-26 173.4 16.2 179 49-245 22-223 (432)
19 PF07690 MFS_1: Major Facilita 99.9 9.4E-22 2E-26 166.1 16.1 154 89-242 19-174 (352)
20 TIGR00894 2A0114euk Na(+)-depe 99.9 8.3E-22 1.8E-26 173.4 15.8 199 46-244 16-223 (465)
21 PRK12307 putative sialic acid 99.9 1.2E-21 2.5E-26 170.4 16.2 165 47-228 16-181 (426)
22 PRK09705 cynX putative cyanate 99.9 2.5E-21 5.3E-26 167.0 17.7 147 87-234 30-178 (393)
23 TIGR00890 2A0111 Oxalate/Forma 99.9 1.5E-21 3.2E-26 166.2 15.3 153 88-241 25-178 (377)
24 PRK10077 xylE D-xylose transpo 99.9 1.8E-21 4E-26 171.6 16.3 181 48-246 11-220 (479)
25 TIGR00893 2A0114 d-galactonate 99.9 5.3E-22 1.1E-26 169.6 12.4 156 88-243 16-172 (399)
26 PRK03699 putative transporter; 99.9 5.1E-21 1.1E-25 165.0 17.7 173 48-237 6-180 (394)
27 PRK10642 proline/glycine betai 99.9 2.4E-21 5.1E-26 171.6 15.9 180 48-245 15-217 (490)
28 PRK15402 multidrug efflux syst 99.9 4.1E-21 8.9E-26 166.1 16.9 158 87-244 34-192 (406)
29 TIGR00879 SP MFS transporter, 99.9 2.7E-21 5.9E-26 169.4 15.5 156 88-244 50-220 (481)
30 PLN00028 nitrate transmembrane 99.9 9.9E-21 2.1E-25 167.0 18.9 153 88-241 58-220 (476)
31 PRK11652 emrD multidrug resist 99.9 7.4E-21 1.6E-25 163.9 17.7 158 87-244 29-187 (394)
32 PRK11102 bicyclomycin/multidru 99.9 4.8E-21 1E-25 163.9 15.9 160 85-244 10-170 (377)
33 TIGR00898 2A0119 cation transp 99.9 3.9E-21 8.5E-26 170.8 15.8 157 87-246 110-269 (505)
34 TIGR00887 2A0109 phosphate:H+ 99.9 5.2E-21 1.1E-25 169.9 15.8 183 47-247 14-231 (502)
35 PRK03893 putative sialic acid 99.9 1.2E-20 2.6E-25 167.3 17.7 165 47-228 18-183 (496)
36 PRK10504 putative transporter; 99.9 1.3E-20 2.8E-25 166.0 17.7 156 88-243 32-188 (471)
37 TIGR00881 2A0104 phosphoglycer 99.9 1.4E-21 3E-26 166.4 9.7 156 88-243 17-174 (379)
38 PRK11273 glpT sn-glycerol-3-ph 99.9 6.2E-21 1.3E-25 167.3 13.9 179 48-244 28-212 (452)
39 TIGR00886 2A0108 nitrite extru 99.9 1.6E-20 3.5E-25 159.9 15.8 155 88-243 23-191 (366)
40 TIGR00900 2A0121 H+ Antiporter 99.9 3.1E-20 6.7E-25 157.5 17.3 150 90-239 23-178 (365)
41 TIGR00895 2A0115 benzoate tran 99.9 6.4E-21 1.4E-25 163.5 13.1 179 48-243 16-195 (398)
42 PRK10473 multidrug efflux syst 99.9 3.9E-20 8.5E-25 159.3 17.7 157 88-244 25-182 (392)
43 PRK15075 citrate-proton sympor 99.9 2.1E-20 4.6E-25 163.1 16.0 166 46-228 12-200 (434)
44 TIGR00806 rfc RFC reduced fola 99.9 5.4E-20 1.2E-24 157.6 17.6 136 89-225 49-185 (511)
45 TIGR00892 2A0113 monocarboxyla 99.8 5.5E-20 1.2E-24 161.4 17.9 152 89-241 42-195 (455)
46 PRK11043 putative transporter; 99.8 6.6E-20 1.4E-24 158.3 17.1 155 87-241 27-182 (401)
47 PRK15034 nitrate/nitrite trans 99.8 8.8E-20 1.9E-24 158.1 17.5 177 48-242 33-234 (462)
48 KOG2532 Permease of the major 99.8 3.9E-20 8.4E-25 161.1 15.3 152 93-244 65-220 (466)
49 PRK09952 shikimate transporter 99.8 3.5E-20 7.6E-25 161.9 15.1 181 46-245 19-224 (438)
50 KOG2533 Permease of the major 99.8 1.1E-20 2.3E-25 165.2 11.5 186 44-245 40-232 (495)
51 PRK05122 major facilitator sup 99.8 5.5E-20 1.2E-24 158.7 15.8 143 89-231 38-190 (399)
52 PRK12382 putative transporter; 99.8 2.1E-19 4.5E-24 154.8 18.7 142 88-229 37-188 (392)
53 PRK10054 putative transporter; 99.8 1.4E-19 3E-24 156.2 17.4 153 90-242 32-184 (395)
54 TIGR00712 glpT glycerol-3-phos 99.8 4.1E-20 8.8E-25 161.5 13.6 179 48-244 26-210 (438)
55 KOG0254 Predicted transporter 99.8 2.1E-19 4.5E-24 160.0 16.9 148 102-250 90-239 (513)
56 TIGR00885 fucP L-fucose:H+ sym 99.8 3.2E-19 6.8E-24 154.6 17.4 151 87-237 24-204 (410)
57 PRK11646 multidrug resistance 99.8 4.5E-19 9.9E-24 153.2 18.2 153 90-242 35-187 (400)
58 PRK10133 L-fucose transporter; 99.8 5.6E-19 1.2E-23 154.3 18.6 125 88-212 48-175 (438)
59 TIGR00805 oat sodium-independe 99.8 4E-20 8.7E-25 167.7 11.5 152 88-239 55-280 (633)
60 PRK09874 drug efflux system pr 99.8 6.7E-19 1.5E-23 152.1 18.5 155 88-243 36-196 (408)
61 PRK10207 dipeptide/tripeptide 99.8 4.7E-19 1E-23 156.5 15.4 139 90-228 39-182 (489)
62 PRK11195 lysophospholipid tran 99.8 9.1E-19 2E-23 151.0 16.0 151 90-244 27-177 (393)
63 KOG0255 Synaptic vesicle trans 99.8 4.3E-19 9.3E-24 158.4 14.4 156 93-251 110-265 (521)
64 TIGR00899 2A0120 sugar efflux 99.8 1.7E-18 3.7E-23 147.8 17.1 155 91-245 23-181 (375)
65 PRK03633 putative MFS family t 99.8 1.6E-18 3.6E-23 148.7 17.0 127 88-214 28-154 (381)
66 PF06609 TRI12: Fungal trichot 99.8 2.4E-18 5.3E-23 152.4 15.7 153 88-242 66-220 (599)
67 KOG3764 Vesicular amine transp 99.8 1.2E-18 2.6E-23 144.3 12.2 148 94-241 99-248 (464)
68 TIGR00896 CynX cyanate transpo 99.8 4.4E-18 9.6E-23 144.6 16.0 144 86-231 20-166 (355)
69 TIGR00924 yjdL_sub1_fam amino 99.8 4.8E-18 1E-22 149.8 16.3 145 91-235 36-187 (475)
70 cd06174 MFS The Major Facilita 99.8 3E-18 6.6E-23 144.2 14.5 150 88-237 21-171 (352)
71 TIGR00897 2A0118 polyol permea 99.8 9.8E-18 2.1E-22 145.0 17.6 150 90-239 37-192 (402)
72 PTZ00207 hypothetical protein; 99.8 2.8E-17 6E-22 146.4 18.5 148 90-240 51-205 (591)
73 COG2223 NarK Nitrate/nitrite t 99.8 5.9E-18 1.3E-22 141.6 13.1 177 49-244 14-197 (417)
74 PRK10489 enterobactin exporter 99.7 2.2E-17 4.7E-22 143.4 14.0 153 90-243 41-199 (417)
75 KOG2504 Monocarboxylate transp 99.7 2.6E-17 5.7E-22 145.1 14.0 152 90-242 70-223 (509)
76 PRK15011 sugar efflux transpor 99.7 2.2E-16 4.8E-21 136.1 19.3 154 90-244 40-198 (393)
77 TIGR00880 2_A_01_02 Multidrug 99.7 2.8E-17 6E-22 120.3 11.5 136 107-242 4-140 (141)
78 PRK09584 tppB putative tripept 99.7 1.2E-16 2.5E-21 141.9 17.3 144 90-233 46-194 (500)
79 TIGR00889 2A0110 nucleoside tr 99.7 1.6E-16 3.5E-21 138.1 17.7 154 101-254 251-416 (418)
80 KOG2615 Permease of the major 99.7 4.8E-17 1E-21 134.2 11.8 117 97-214 64-180 (451)
81 TIGR00901 2A0125 AmpG-related 99.7 1.6E-16 3.4E-21 135.1 14.4 155 87-243 9-181 (356)
82 PRK15462 dipeptide/tripeptide 99.7 2.9E-16 6.4E-21 137.6 16.3 145 91-235 35-184 (493)
83 TIGR00883 2A0106 metabolite-pr 99.7 1.9E-16 4.2E-21 135.5 12.4 153 91-244 18-194 (394)
84 PRK06814 acylglycerophosphoeth 99.7 1.3E-15 2.8E-20 147.6 16.9 142 101-243 52-197 (1140)
85 PRK08633 2-acyl-glycerophospho 99.7 1.5E-15 3.2E-20 147.2 17.2 154 91-244 35-203 (1146)
86 COG0738 FucP Fucose permease [ 99.7 5.5E-15 1.2E-19 123.3 17.5 154 87-240 34-210 (422)
87 PRK15011 sugar efflux transpor 99.7 6.6E-15 1.4E-19 127.0 18.8 148 91-239 242-390 (393)
88 KOG0252 Inorganic phosphate tr 99.7 7.7E-17 1.7E-21 135.9 5.7 181 48-247 40-252 (538)
89 PRK11010 ampG muropeptide tran 99.7 4.2E-15 9.2E-20 131.7 17.1 153 88-243 34-197 (491)
90 TIGR00902 2A0127 phenyl propri 99.7 2.1E-15 4.5E-20 129.6 14.3 140 87-228 25-167 (382)
91 PF00083 Sugar_tr: Sugar (and 99.7 7.7E-19 1.7E-23 153.9 -7.5 150 100-250 45-201 (451)
92 PRK05122 major facilitator sup 99.7 7E-15 1.5E-19 126.9 17.0 147 94-242 244-391 (399)
93 KOG0569 Permease of the major 99.7 3.7E-15 8.1E-20 129.3 15.1 145 103-248 62-212 (485)
94 TIGR01299 synapt_SV2 synaptic 99.6 3.7E-15 8.1E-20 136.5 15.6 141 103-244 597-737 (742)
95 PRK11902 ampG muropeptide tran 99.6 6.1E-15 1.3E-19 127.5 16.2 153 88-243 21-184 (402)
96 PRK09528 lacY galactoside perm 99.6 1E-15 2.3E-20 133.0 11.1 147 96-242 257-405 (420)
97 TIGR00882 2A0105 oligosacchari 99.6 5.8E-15 1.3E-19 127.4 15.5 151 91-243 28-186 (396)
98 TIGR00899 2A0120 sugar efflux 99.6 1.6E-14 3.5E-19 123.2 18.0 147 91-238 225-372 (375)
99 PRK11551 putative 3-hydroxyphe 99.6 7.1E-15 1.5E-19 127.1 14.9 150 90-239 244-395 (406)
100 TIGR00890 2A0111 Oxalate/Forma 99.6 3.1E-15 6.6E-20 127.3 12.3 142 91-232 230-374 (377)
101 PRK11128 putative 3-phenylprop 99.6 2.6E-15 5.5E-20 129.1 11.7 151 87-242 25-180 (382)
102 PRK10642 proline/glycine betai 99.6 2E-14 4.3E-19 127.5 17.2 157 91-248 276-437 (490)
103 PRK10489 enterobactin exporter 99.6 1.6E-14 3.6E-19 125.4 15.6 154 91-244 249-403 (417)
104 TIGR00902 2A0127 phenyl propri 99.6 3.9E-14 8.5E-19 121.7 17.3 143 91-235 230-374 (382)
105 PRK09528 lacY galactoside perm 99.6 2E-14 4.2E-19 125.1 14.7 154 90-243 35-194 (420)
106 KOG0253 Synaptic vesicle trans 99.6 4E-15 8.7E-20 122.5 9.6 156 90-248 102-258 (528)
107 PRK03699 putative transporter; 99.6 5E-14 1.1E-18 121.6 16.7 149 90-239 230-379 (394)
108 cd06174 MFS The Major Facilita 99.6 2.1E-14 4.6E-19 120.8 14.0 146 92-237 202-349 (352)
109 PRK12382 putative transporter; 99.6 3.5E-14 7.7E-19 122.3 15.4 144 94-239 244-388 (392)
110 TIGR00893 2A0114 d-galactonate 99.6 1.7E-14 3.6E-19 123.2 13.0 147 91-238 241-397 (399)
111 PRK09874 drug efflux system pr 99.6 1.9E-14 4.2E-19 124.3 12.3 138 103-240 260-398 (408)
112 TIGR00879 SP MFS transporter, 99.6 3.8E-14 8.3E-19 124.2 14.3 155 90-244 308-474 (481)
113 PRK03545 putative arabinose tr 99.6 1.9E-13 4.1E-18 117.7 18.0 149 90-240 230-380 (390)
114 PRK09556 uhpT sugar phosphate 99.6 5.3E-14 1.2E-18 124.1 14.6 150 90-239 283-448 (467)
115 PRK09705 cynX putative cyanate 99.6 1.9E-13 4.1E-18 118.0 17.6 158 91-250 230-391 (393)
116 PRK03633 putative MFS family t 99.6 1.7E-13 3.7E-18 117.7 16.6 146 90-238 224-370 (381)
117 KOG2325 Predicted transporter/ 99.5 1.6E-13 3.6E-18 118.5 14.9 185 45-246 30-235 (488)
118 TIGR00891 2A0112 putative sial 99.5 8.2E-14 1.8E-18 119.9 11.9 135 90-224 263-400 (405)
119 PF05977 MFS_3: Transmembrane 99.5 7.4E-13 1.6E-17 117.5 17.5 151 91-241 35-191 (524)
120 TIGR01301 GPH_sucrose GPH fami 99.5 4.5E-13 9.8E-18 117.2 15.5 155 90-244 28-222 (477)
121 TIGR00883 2A0106 metabolite-pr 99.5 7.1E-14 1.5E-18 119.6 10.4 139 91-229 245-390 (394)
122 COG2807 CynX Cyanate permease 99.5 1E-12 2.2E-17 108.4 16.1 149 87-237 33-183 (395)
123 PRK11663 regulatory protein Uh 99.5 3.4E-13 7.4E-18 117.9 14.3 149 91-240 269-424 (434)
124 TIGR00792 gph sugar (Glycoside 99.5 1.8E-13 3.9E-18 119.4 12.4 155 90-244 24-198 (437)
125 TIGR00892 2A0113 monocarboxyla 99.5 2E-13 4.3E-18 120.1 12.0 146 90-235 265-416 (455)
126 PRK10077 xylE D-xylose transpo 99.5 2.1E-13 4.5E-18 120.5 11.9 156 90-245 295-462 (479)
127 COG2271 UhpC Sugar phosphate p 99.5 7.3E-14 1.6E-18 117.2 8.4 177 47-239 250-433 (448)
128 TIGR00889 2A0110 nucleoside tr 99.5 6E-13 1.3E-17 115.7 13.8 147 90-244 27-183 (418)
129 TIGR00895 2A0115 benzoate tran 99.5 5.6E-13 1.2E-17 114.3 13.3 124 90-213 274-397 (398)
130 PRK11273 glpT sn-glycerol-3-ph 99.5 3.1E-13 6.7E-18 118.7 11.7 150 90-239 278-434 (452)
131 PRK03893 putative sialic acid 99.5 8.3E-13 1.8E-17 117.2 14.4 141 91-231 301-444 (496)
132 PRK11128 putative 3-phenylprop 99.5 2.3E-12 5.1E-17 110.7 16.7 140 91-232 230-371 (382)
133 TIGR00897 2A0118 polyol permea 99.5 2.7E-12 5.8E-17 111.1 16.9 148 90-239 246-400 (402)
134 COG3104 PTR2 Dipeptide/tripept 99.5 4.1E-13 8.9E-18 115.1 11.4 144 96-239 56-205 (498)
135 PRK09952 shikimate transporter 99.5 1.2E-12 2.6E-17 114.5 14.6 149 91-239 276-432 (438)
136 PF05977 MFS_3: Transmembrane 99.5 4.1E-12 9E-17 112.8 17.9 150 90-239 242-393 (524)
137 TIGR00887 2A0109 phosphate:H+ 99.5 2.1E-12 4.5E-17 115.0 15.2 156 90-246 312-494 (502)
138 COG2814 AraJ Arabinose efflux 99.4 5E-12 1.1E-16 107.0 15.7 150 89-240 235-386 (394)
139 TIGR00898 2A0119 cation transp 99.4 3.4E-12 7.4E-17 113.6 15.3 139 105-245 359-499 (505)
140 TIGR00712 glpT glycerol-3-phos 99.4 1E-12 2.2E-17 115.0 10.9 155 90-244 276-437 (438)
141 TIGR00900 2A0121 H+ Antiporter 99.4 1.1E-12 2.5E-17 111.1 10.7 125 90-214 235-361 (365)
142 PF11700 ATG22: Vacuole efflux 99.4 7.8E-12 1.7E-16 109.9 16.1 149 91-239 307-467 (477)
143 PRK11010 ampG muropeptide tran 99.4 1.3E-11 2.8E-16 109.5 17.7 151 90-240 247-403 (491)
144 TIGR02718 sider_RhtX_FptX side 99.4 9.7E-12 2.1E-16 107.1 16.4 156 87-242 22-186 (390)
145 TIGR00882 2A0105 oligosacchari 99.4 3.6E-12 7.7E-17 110.0 12.4 141 97-237 250-392 (396)
146 PRK10504 putative transporter; 99.4 2.5E-11 5.5E-16 107.1 17.1 122 93-214 289-413 (471)
147 TIGR00881 2A0104 phosphoglycer 99.4 1.1E-12 2.4E-17 111.6 8.2 132 91-222 242-379 (379)
148 PRK15402 multidrug efflux syst 99.4 5.5E-11 1.2E-15 102.9 18.6 145 91-236 241-391 (406)
149 PRK08633 2-acyl-glycerophospho 99.4 1.2E-11 2.7E-16 120.1 15.9 145 90-234 257-404 (1146)
150 PRK12307 putative sialic acid 99.4 1.1E-11 2.4E-16 107.9 14.1 134 90-223 255-391 (426)
151 TIGR01272 gluP glucose/galacto 99.4 2.9E-11 6.4E-16 101.0 15.6 130 95-227 172-302 (310)
152 PRK15075 citrate-proton sympor 99.4 1.6E-11 3.4E-16 107.4 14.4 129 91-219 264-398 (434)
153 TIGR00792 gph sugar (Glycoside 99.4 2.9E-11 6.4E-16 105.5 16.0 123 95-218 252-383 (437)
154 PRK10406 alpha-ketoglutarate t 99.4 1.7E-11 3.6E-16 107.2 14.5 149 90-238 268-422 (432)
155 TIGR00788 fbt folate/biopterin 99.4 1.1E-11 2.3E-16 109.4 13.2 151 90-243 50-211 (468)
156 PLN00028 nitrate transmembrane 99.4 1.8E-11 4E-16 108.2 14.6 148 91-239 278-432 (476)
157 KOG0569 Permease of the major 99.4 1.9E-11 4E-16 106.4 14.2 154 91-245 295-459 (485)
158 TIGR02718 sider_RhtX_FptX side 99.4 4.7E-11 1E-15 102.9 16.7 144 91-234 233-385 (390)
159 PRK10054 putative transporter; 99.4 2.4E-11 5.1E-16 105.0 14.4 143 94-237 237-381 (395)
160 PF03825 Nuc_H_symport: Nucleo 99.3 6.9E-11 1.5E-15 101.9 16.8 151 92-242 233-397 (400)
161 PF01306 LacY_symp: LacY proto 99.3 5.8E-11 1.3E-15 101.4 15.9 148 98-245 256-405 (412)
162 KOG2563 Permease of the major 99.3 5.4E-11 1.2E-15 100.9 14.6 183 43-243 39-238 (480)
163 PRK10091 MFS transport protein 99.3 1.5E-10 3.2E-15 99.6 16.9 149 90-240 224-376 (382)
164 PF05631 DUF791: Protein of un 99.3 1.7E-10 3.8E-15 95.8 16.3 154 91-245 59-221 (354)
165 PRK11646 multidrug resistance 99.3 1.3E-10 2.8E-15 100.6 16.3 146 90-235 232-383 (400)
166 PRK11902 ampG muropeptide tran 99.3 1.7E-10 3.8E-15 99.8 17.0 146 90-239 234-389 (402)
167 PRK10213 nepI ribonucleoside t 99.3 1.9E-10 4.1E-15 99.4 17.2 144 90-234 241-385 (394)
168 PRK11195 lysophospholipid tran 99.3 2.1E-10 4.5E-15 99.1 17.3 145 91-236 231-376 (393)
169 PF06813 Nodulin-like: Nodulin 99.3 1.6E-10 3.5E-15 92.7 14.6 149 90-240 26-182 (250)
170 COG2223 NarK Nitrate/nitrite t 99.3 4.5E-11 9.8E-16 100.6 11.7 148 91-239 244-400 (417)
171 PRK06814 acylglycerophosphoeth 99.3 6.5E-11 1.4E-15 115.1 14.4 147 90-236 250-418 (1140)
172 TIGR00894 2A0114euk Na(+)-depe 99.3 3.2E-11 6.9E-16 106.3 10.9 161 91-252 287-463 (465)
173 KOG2504 Monocarboxylate transp 99.3 4.8E-11 1E-15 105.6 11.7 150 90-239 322-475 (509)
174 TIGR00710 efflux_Bcr_CflA drug 99.3 2.6E-10 5.6E-15 97.6 15.6 132 91-224 232-370 (385)
175 COG2270 Permeases of the major 99.2 6.2E-11 1.3E-15 99.9 10.5 145 91-235 278-424 (438)
176 PRK09669 putative symporter Ya 99.2 9.2E-11 2E-15 102.9 11.8 153 90-242 34-206 (444)
177 TIGR02332 HpaX 4-hydroxyphenyl 99.2 1.5E-10 3.2E-15 100.6 12.9 140 90-229 266-410 (412)
178 TIGR00711 efflux_EmrB drug res 99.2 2.3E-10 5E-15 101.1 14.3 124 91-214 281-408 (485)
179 TIGR00896 CynX cyanate transpo 99.2 2.2E-10 4.9E-15 97.3 13.5 124 90-214 221-346 (355)
180 PRK10473 multidrug efflux syst 99.2 4.3E-10 9.2E-15 96.9 14.9 132 91-227 229-361 (392)
181 PRK10133 L-fucose transporter; 99.2 7.9E-10 1.7E-14 96.8 16.0 136 93-231 287-424 (438)
182 KOG4686 Predicted sugar transp 99.2 5.4E-10 1.2E-14 89.7 13.3 162 43-225 261-427 (459)
183 PRK09848 glucuronide transport 99.2 8.3E-10 1.8E-14 96.9 15.9 124 91-214 254-386 (448)
184 PRK14995 methyl viologen resis 99.2 5.9E-10 1.3E-14 99.1 13.9 124 91-214 285-411 (495)
185 TIGR00901 2A0125 AmpG-related 99.2 7.4E-10 1.6E-14 94.2 13.5 110 91-200 234-355 (356)
186 KOG0253 Synaptic vesicle trans 99.2 1.2E-10 2.5E-15 96.6 8.0 134 109-244 389-522 (528)
187 PF07690 MFS_1: Major Facilita 99.2 2.6E-10 5.7E-15 96.2 10.3 116 92-207 233-352 (352)
188 PF03137 OATP: Organic Anion T 99.1 4.6E-12 1E-16 112.9 -0.9 151 89-239 26-249 (539)
189 PRK11102 bicyclomycin/multidru 99.1 3E-09 6.5E-14 91.0 15.8 121 91-212 220-345 (377)
190 TIGR00924 yjdL_sub1_fam amino 99.1 2.3E-09 5E-14 94.8 14.8 139 103-241 314-469 (475)
191 PRK11043 putative transporter; 99.1 8.8E-09 1.9E-13 89.0 17.8 124 90-214 227-355 (401)
192 TIGR00903 2A0129 major facilit 99.1 2.8E-09 6.2E-14 91.2 14.1 143 90-237 216-362 (368)
193 PF13347 MFS_2: MFS/sugar tran 99.1 2.8E-10 6.1E-15 99.3 7.8 153 90-242 26-200 (428)
194 PRK09669 putative symporter Ya 99.1 5.6E-09 1.2E-13 91.6 15.8 114 101-214 264-386 (444)
195 PF13347 MFS_2: MFS/sugar tran 99.1 5.2E-09 1.1E-13 91.4 14.8 123 91-214 250-382 (428)
196 KOG3626 Organic anion transpor 99.1 5.5E-10 1.2E-14 100.7 8.7 151 89-239 120-342 (735)
197 COG0477 ProP Permeases of the 99.0 4E-09 8.7E-14 86.2 12.7 142 90-231 26-176 (338)
198 PRK10429 melibiose:sodium symp 99.0 4.4E-09 9.6E-14 93.0 13.7 154 90-243 31-204 (473)
199 PRK10429 melibiose:sodium symp 99.0 4.9E-09 1.1E-13 92.7 13.8 124 91-214 256-391 (473)
200 KOG3762 Predicted transporter 99.0 2.4E-09 5.1E-14 92.8 11.2 147 93-239 398-546 (618)
201 PRK09584 tppB putative tripept 99.0 1.7E-08 3.6E-13 90.0 16.8 139 103-241 318-480 (500)
202 PRK15034 nitrate/nitrite trans 99.0 1E-08 2.2E-13 89.6 14.9 133 107-239 292-453 (462)
203 TIGR00788 fbt folate/biopterin 99.0 5.5E-09 1.2E-13 92.3 13.0 125 93-217 280-415 (468)
204 COG2807 CynX Cyanate permease 99.0 2E-08 4.3E-13 83.4 15.1 151 90-241 232-386 (395)
205 PF03825 Nuc_H_symport: Nucleo 99.0 2.3E-08 5E-13 86.3 14.6 152 90-244 26-183 (400)
206 TIGR00926 2A1704 Peptide:H+ sy 98.9 1.6E-08 3.5E-13 92.1 13.3 150 90-239 12-181 (654)
207 PF01306 LacY_symp: LacY proto 98.9 6E-09 1.3E-13 89.2 8.8 151 91-243 33-191 (412)
208 PRK11652 emrD multidrug resist 98.9 1.4E-07 3E-12 81.4 17.4 129 91-220 233-365 (394)
209 PF03209 PUCC: PUCC protein; 98.9 1.5E-07 3.2E-12 79.8 16.7 148 90-237 233-395 (403)
210 PRK11462 putative transporter; 98.9 4.2E-08 9.1E-13 86.5 14.2 154 90-243 34-207 (460)
211 KOG3764 Vesicular amine transp 98.9 1.4E-08 3E-13 85.2 9.3 148 92-239 297-453 (464)
212 TIGR00885 fucP L-fucose:H+ sym 98.9 8.4E-08 1.8E-12 83.4 14.8 128 97-227 265-399 (410)
213 PF06779 DUF1228: Protein of u 98.9 6.5E-09 1.4E-13 68.6 5.8 73 85-157 11-83 (85)
214 PF00083 Sugar_tr: Sugar (and 98.8 1.2E-11 2.7E-16 108.4 -10.2 156 90-247 277-443 (451)
215 PRK10207 dipeptide/tripeptide 98.8 4.7E-08 1E-12 86.8 12.5 141 103-243 311-479 (489)
216 TIGR00886 2A0108 nitrite extru 98.8 2E-08 4.2E-13 85.5 8.8 111 91-202 251-365 (366)
217 PRK09848 glucuronide transport 98.8 1.3E-07 2.9E-12 83.0 14.3 124 90-213 33-174 (448)
218 KOG2816 Predicted transporter 98.8 2.4E-07 5.1E-12 81.2 14.4 131 111-246 72-205 (463)
219 KOG4686 Predicted sugar transp 98.8 6.9E-10 1.5E-14 89.1 -1.3 124 91-214 69-196 (459)
220 PF03092 BT1: BT1 family; Int 98.8 8.8E-08 1.9E-12 83.7 11.1 154 88-242 12-177 (433)
221 COG0738 FucP Fucose permease [ 98.7 2.4E-07 5.2E-12 78.1 12.5 140 91-233 262-402 (422)
222 COG2211 MelB Na+/melibiose sym 98.7 8.2E-07 1.8E-11 77.1 15.3 121 93-213 264-393 (467)
223 KOG0254 Predicted transporter 98.7 7.1E-07 1.5E-11 79.9 15.0 156 90-246 319-489 (513)
224 PRK11462 putative transporter; 98.7 1.1E-06 2.3E-11 77.7 15.7 114 101-214 263-385 (460)
225 PF05978 UNC-93: Ion channel r 98.7 2.2E-07 4.8E-12 69.2 9.3 114 98-212 34-147 (156)
226 KOG2532 Permease of the major 98.6 7.5E-08 1.6E-12 84.5 7.5 145 90-239 283-446 (466)
227 TIGR01272 gluP glucose/galacto 98.6 3.6E-07 7.9E-12 76.4 10.7 91 149-239 5-112 (310)
228 TIGR01301 GPH_sucrose GPH fami 98.6 2.1E-06 4.6E-11 75.6 14.7 140 105-244 309-475 (477)
229 PRK15403 multidrug efflux syst 98.6 4.6E-06 9.9E-11 72.6 16.8 144 91-235 244-392 (413)
230 PF03209 PUCC: PUCC protein; 98.6 5.7E-06 1.2E-10 70.3 15.9 123 91-214 5-149 (403)
231 PF01770 Folate_carrier: Reduc 98.5 2.1E-05 4.5E-10 67.5 18.1 149 90-239 28-181 (412)
232 KOG0252 Inorganic phosphate tr 98.5 1.5E-07 3.2E-12 80.5 4.9 133 112-245 359-502 (538)
233 COG2211 MelB Na+/melibiose sym 98.5 4.8E-06 1E-10 72.4 14.1 154 91-244 38-211 (467)
234 PF11700 ATG22: Vacuole efflux 98.5 9.4E-06 2E-10 71.8 16.2 144 102-245 71-252 (477)
235 KOG2816 Predicted transporter 98.4 3.4E-05 7.3E-10 67.8 16.3 123 91-214 267-390 (463)
236 KOG2615 Permease of the major 98.3 4.5E-06 9.7E-11 70.1 9.8 135 93-227 289-427 (451)
237 PF06609 TRI12: Fungal trichot 98.3 1.8E-05 4E-10 71.2 13.0 110 102-211 350-462 (599)
238 KOG0255 Synaptic vesicle trans 98.2 4.6E-05 1E-09 68.3 14.7 140 104-245 353-497 (521)
239 PF00854 PTR2: POT family; In 98.2 1.2E-05 2.5E-10 69.1 10.2 108 132-239 2-122 (372)
240 KOG0637 Sucrose transporter an 98.2 1.4E-05 3.1E-10 68.6 10.0 125 90-214 56-203 (498)
241 KOG2533 Permease of the major 98.2 1.6E-05 3.5E-10 70.4 9.9 138 90-227 297-443 (495)
242 PTZ00207 hypothetical protein; 98.1 3.7E-05 8E-10 69.5 11.7 148 90-239 377-551 (591)
243 PF02487 CLN3: CLN3 protein; 98.1 0.00011 2.3E-09 63.1 13.1 116 96-213 276-394 (402)
244 PRK15462 dipeptide/tripeptide 98.1 0.00013 2.8E-09 64.8 13.7 137 103-239 310-477 (493)
245 TIGR00769 AAA ADP/ATP carrier 98.0 0.0013 2.8E-08 58.1 19.1 125 90-214 27-189 (472)
246 PRK03612 spermidine synthase; 98.0 0.00072 1.6E-08 60.6 17.1 141 91-233 40-190 (521)
247 PF12832 MFS_1_like: MFS_1 lik 97.9 1.7E-05 3.8E-10 51.7 4.7 52 90-141 24-75 (77)
248 COG3104 PTR2 Dipeptide/tripept 97.8 0.00093 2E-08 58.4 13.4 143 102-244 325-491 (498)
249 COG2270 Permeases of the major 97.7 0.001 2.2E-08 57.0 11.9 144 101-244 58-224 (438)
250 KOG1237 H+/oligopeptide sympor 97.6 0.00076 1.7E-08 60.9 11.8 150 89-238 61-243 (571)
251 KOG2325 Predicted transporter/ 97.3 0.00027 5.8E-09 62.0 4.7 83 154-236 387-471 (488)
252 PF03092 BT1: BT1 family; Int 97.3 0.0028 6.1E-08 55.6 11.2 145 98-243 252-415 (433)
253 PF06963 FPN1: Ferroportin1 (F 97.3 0.0016 3.4E-08 56.9 9.3 122 92-213 284-415 (432)
254 PF02487 CLN3: CLN3 protein; 97.3 0.0068 1.5E-07 52.2 12.4 134 103-241 61-196 (402)
255 PF03137 OATP: Organic Anion T 97.0 0.00019 4.2E-09 64.5 0.0 125 90-214 330-512 (539)
256 KOG3098 Uncharacterized conser 96.9 0.0049 1.1E-07 54.0 8.5 108 103-211 51-159 (461)
257 KOG2563 Permease of the major 96.9 0.0012 2.6E-08 57.0 4.5 149 95-243 295-453 (480)
258 KOG4332 Predicted sugar transp 96.9 0.0012 2.5E-08 53.5 3.9 89 91-183 62-154 (454)
259 TIGR00939 2a57 Equilibrative N 96.8 0.03 6.5E-07 49.2 12.7 107 104-211 310-429 (437)
260 TIGR00805 oat sodium-independe 96.6 0.013 2.9E-07 53.9 9.4 125 90-214 355-579 (633)
261 KOG3574 Acetyl-CoA transporter 96.5 0.064 1.4E-06 45.8 11.5 141 49-209 31-188 (510)
262 KOG3098 Uncharacterized conser 96.4 0.12 2.7E-06 45.4 13.3 109 104-213 282-411 (461)
263 COG3202 ATP/ADP translocase [E 96.3 0.73 1.6E-05 40.7 17.5 124 91-214 48-208 (509)
264 KOG3762 Predicted transporter 96.2 0.004 8.6E-08 55.0 3.2 65 87-151 32-97 (618)
265 KOG1330 Sugar transporter/spin 96.0 0.035 7.7E-07 48.4 7.9 127 93-219 275-417 (493)
266 PF03219 TLC: TLC ATP/ADP tran 96.0 1.1 2.4E-05 40.1 17.9 116 99-214 56-204 (491)
267 KOG3626 Organic anion transpor 95.9 0.034 7.3E-07 51.4 7.8 125 90-214 417-647 (735)
268 PF01770 Folate_carrier: Reduc 95.7 0.15 3.3E-06 44.2 10.6 97 102-198 286-384 (412)
269 PF01733 Nucleoside_tran: Nucl 95.4 0.0048 1E-07 51.6 0.4 106 106-211 187-305 (309)
270 KOG4332 Predicted sugar transp 95.1 0.85 1.8E-05 37.4 12.2 135 103-237 284-428 (454)
271 KOG1479 Nucleoside transporter 93.9 0.49 1.1E-05 40.9 8.8 108 101-209 282-398 (406)
272 TIGR00806 rfc RFC reduced fola 93.6 0.94 2E-05 40.3 10.2 97 103-199 300-398 (511)
273 PF13000 Acatn: Acetyl-coenzym 92.6 2.5 5.3E-05 37.7 11.1 121 90-210 24-174 (544)
274 KOG3810 Micronutrient transpor 92.0 0.26 5.7E-06 41.7 4.4 124 90-214 29-154 (433)
275 KOG1479 Nucleoside transporter 91.7 8.4 0.00018 33.5 13.2 37 153-190 116-152 (406)
276 COG4262 Predicted spermidine s 91.4 8 0.00017 33.1 12.4 85 97-181 39-132 (508)
277 PF06963 FPN1: Ferroportin1 (F 91.4 9.6 0.00021 33.6 15.6 133 104-237 41-197 (432)
278 KOG3097 Predicted membrane pro 91.4 1.3 2.8E-05 37.3 7.7 73 111-184 68-140 (390)
279 KOG0637 Sucrose transporter an 89.3 1 2.3E-05 39.5 5.8 128 104-231 335-487 (498)
280 KOG3810 Micronutrient transpor 89.0 3.5 7.5E-05 35.2 8.4 95 104-198 274-370 (433)
281 COG5336 Uncharacterized protei 87.1 1.7 3.8E-05 29.8 4.6 25 104-128 45-69 (116)
282 PF12805 FUSC-like: FUSC-like 86.8 13 0.00027 30.7 10.7 39 135-173 3-42 (284)
283 KOG3880 Predicted small molecu 86.7 1.9 4.1E-05 36.1 5.5 133 103-240 64-199 (409)
284 TIGR00939 2a57 Equilibrative N 86.6 20 0.00042 31.8 12.2 95 109-208 53-155 (437)
285 KOG3880 Predicted small molecu 86.1 2.6 5.6E-05 35.3 6.0 105 101-211 288-399 (409)
286 PF07672 MFS_Mycoplasma: Mycop 85.6 16 0.00034 29.9 10.1 91 103-193 143-245 (267)
287 TIGR01666 YCCS hypothetical me 83.1 28 0.00061 32.8 12.1 56 118-173 40-100 (704)
288 TIGR01667 YCCS_YHJK integral m 83.1 28 0.0006 32.9 12.1 57 118-174 40-101 (701)
289 PRK10263 DNA translocase FtsK; 82.7 16 0.00036 36.6 10.6 11 202-212 143-153 (1355)
290 PF13000 Acatn: Acetyl-coenzym 80.8 38 0.00081 30.6 11.3 55 157-211 408-462 (544)
291 PF03219 TLC: TLC ATP/ADP tran 80.5 44 0.00095 30.1 15.1 73 162-234 290-364 (491)
292 PF06912 DUF1275: Protein of u 79.1 28 0.00061 27.1 13.7 41 107-147 52-95 (209)
293 TIGR00926 2A1704 Peptide:H+ sy 75.4 25 0.00053 33.0 9.2 84 153-236 564-648 (654)
294 TIGR00769 AAA ADP/ATP carrier 74.6 64 0.0014 28.9 16.1 70 162-231 274-345 (472)
295 PF11299 DUF3100: Protein of u 72.5 4.2 9E-05 32.3 3.0 124 59-213 106-229 (241)
296 KOG3574 Acetyl-CoA transporter 72.1 18 0.00039 31.5 6.8 119 93-213 292-428 (510)
297 PF11947 DUF3464: Protein of u 70.5 14 0.0003 27.4 5.2 51 152-205 95-145 (153)
298 TIGR00880 2_A_01_02 Multidrug 67.1 27 0.00058 24.1 6.3 43 102-144 88-130 (141)
299 PF02694 UPF0060: Uncharacteri 64.6 16 0.00035 25.1 4.2 49 101-149 54-102 (107)
300 PF02632 BioY: BioY family; I 63.7 46 0.001 24.6 6.9 25 108-132 60-84 (148)
301 COG2119 Predicted membrane pro 63.7 65 0.0014 24.7 8.4 71 55-145 107-178 (190)
302 PRK02237 hypothetical protein; 60.3 29 0.00063 24.0 4.8 47 102-148 57-103 (109)
303 COG1268 BioY Uncharacterized c 60.0 63 0.0014 24.9 7.2 23 108-130 89-111 (184)
304 KOG1237 H+/oligopeptide sympor 57.6 32 0.0007 31.6 6.2 62 153-214 457-518 (571)
305 PF06123 CreD: Inner membrane 56.7 1.4E+02 0.0031 26.4 11.1 63 127-193 322-384 (430)
306 PF06779 DUF1228: Protein of u 56.2 56 0.0012 21.6 7.2 62 164-228 4-66 (85)
307 COG2233 UraA Xanthine/uracil p 54.2 1.6E+02 0.0035 26.2 9.8 99 92-190 40-141 (451)
308 PF07760 DUF1616: Protein of u 50.5 1.4E+02 0.0031 24.6 9.4 57 157-214 22-78 (287)
309 PRK14229 camphor resistance pr 50.2 84 0.0018 21.8 7.2 48 138-185 33-80 (108)
310 PRK11715 inner membrane protei 48.6 2E+02 0.0043 25.6 11.0 63 128-194 329-391 (436)
311 PF11151 DUF2929: Protein of u 48.0 61 0.0013 19.6 4.7 38 200-237 12-50 (57)
312 PF09527 ATPase_gene1: Putativ 48.0 57 0.0012 19.2 5.6 34 108-141 7-41 (55)
313 COG1230 CzcD Co/Zn/Cd efflux s 47.1 1.7E+02 0.0037 24.5 10.1 53 91-149 50-105 (296)
314 COG2076 EmrE Membrane transpor 46.8 96 0.0021 21.5 8.4 68 116-183 15-83 (106)
315 PLN02776 prenyltransferase 46.3 1.9E+02 0.0041 24.7 9.4 25 129-153 74-98 (341)
316 PF07672 MFS_Mycoplasma: Mycop 44.0 28 0.00061 28.4 3.2 54 186-239 2-61 (267)
317 PF10183 ESSS: ESSS subunit of 41.8 48 0.001 22.9 3.7 30 215-244 56-85 (105)
318 COG3202 ATP/ADP translocase [E 36.0 3.4E+02 0.0073 24.7 14.9 76 162-237 292-370 (509)
319 PF04226 Transgly_assoc: Trans 35.8 90 0.0019 18.0 4.3 35 201-235 6-41 (48)
320 COG4769 Predicted membrane pro 35.4 1.2E+02 0.0026 22.9 5.1 53 109-167 81-133 (181)
321 PRK03818 putative transporter; 34.2 3.8E+02 0.0081 24.7 9.3 80 102-182 436-516 (552)
322 TIGR00844 c_cpa1 na(+)/h(+) an 32.2 4.8E+02 0.01 25.3 11.0 29 101-129 9-37 (810)
323 PF04281 Tom22: Mitochondrial 32.0 1.7E+02 0.0036 21.4 5.3 24 179-202 60-83 (137)
324 PF03741 TerC: Integral membra 31.5 2.4E+02 0.0052 21.6 6.8 61 169-230 11-71 (183)
325 PF10225 DUF2215: Uncharacteri 31.1 2.9E+02 0.0062 22.4 10.0 53 149-205 29-81 (249)
326 TIGR00986 3a0801s05tom22 mitoc 30.6 1.4E+02 0.003 22.0 4.6 23 179-201 58-80 (145)
327 TIGR03173 pbuX xanthine permea 30.5 3.7E+02 0.0079 23.4 11.3 97 94-191 21-118 (406)
328 PTZ00370 STEVOR; Provisional 30.4 2.3E+02 0.0049 23.5 6.3 32 216-247 255-287 (296)
329 PF11833 DUF3353: Protein of u 29.2 2.7E+02 0.006 21.6 6.5 30 185-214 136-165 (194)
330 TIGR00801 ncs2 uracil-xanthine 28.5 4.1E+02 0.0088 23.3 10.2 97 93-191 30-131 (415)
331 PF00854 PTR2: POT family; In 28.1 2.4E+02 0.0052 24.0 6.7 62 90-151 56-122 (372)
332 PLN02332 membrane bound O-acyl 27.4 4.5E+02 0.0098 23.5 11.4 29 130-158 340-368 (465)
333 COG1480 Predicted membrane-ass 27.4 5.4E+02 0.012 24.4 9.2 62 116-177 385-455 (700)
334 PF04346 EutH: Ethanolamine ut 27.3 4E+02 0.0087 22.9 11.5 105 116-222 61-169 (354)
335 PF06570 DUF1129: Protein of u 27.2 3E+02 0.0065 21.4 10.8 18 222-239 180-197 (206)
336 COG5547 Small integral membran 27.0 1.5E+02 0.0033 17.9 5.4 38 133-170 10-47 (62)
337 PF06826 Asp-Al_Ex: Predicted 26.8 2.8E+02 0.0061 20.9 9.2 80 101-182 56-136 (169)
338 PF11511 RhodobacterPufX: Intr 26.6 1.7E+02 0.0037 18.3 4.7 31 217-247 29-59 (67)
339 TIGR03802 Asp_Ala_antiprt aspa 26.4 4.7E+02 0.01 24.1 8.5 41 102-144 451-491 (562)
340 TIGR00836 amt ammonium transpo 26.2 2.6E+02 0.0055 24.6 6.5 49 162-210 283-331 (403)
341 COG4177 LivM ABC-type branched 25.8 4.1E+02 0.0088 22.4 11.2 60 154-214 208-267 (314)
342 PRK10666 ammonium transporter; 25.6 3.7E+02 0.0081 23.8 7.4 49 162-210 307-355 (428)
343 PF13829 DUF4191: Domain of un 25.2 1.4E+02 0.003 23.8 4.2 31 202-232 33-65 (224)
344 PF06783 UPF0239: Uncharacteri 24.9 1.2E+02 0.0026 20.0 3.2 23 218-240 22-44 (85)
345 PF05631 DUF791: Protein of un 24.4 4.6E+02 0.01 22.6 13.9 101 112-212 174-300 (354)
346 PF13334 DUF4094: Domain of un 23.3 1.1E+02 0.0024 20.7 2.9 19 130-148 2-20 (95)
347 PF13940 Ldr_toxin: Toxin Ldr, 23.3 1.3E+02 0.0029 15.9 3.2 20 108-127 15-34 (35)
348 PRK10457 hypothetical protein; 23.2 2.3E+02 0.0049 18.6 5.8 16 199-214 36-51 (82)
349 PRK14230 camphor resistance pr 22.8 2.8E+02 0.0061 19.6 6.5 48 137-184 36-83 (119)
350 PF00909 Ammonium_transp: Ammo 22.2 4.6E+02 0.0099 22.9 7.4 49 162-210 278-326 (399)
351 PF11298 DUF3099: Protein of u 22.1 2E+02 0.0044 18.4 3.8 30 125-154 11-40 (73)
352 PRK14214 camphor resistance pr 22.0 2.9E+02 0.0063 19.4 7.3 49 137-185 38-86 (118)
353 PF13937 DUF4212: Domain of un 21.5 2.5E+02 0.0054 18.4 5.0 32 204-235 27-61 (81)
354 PTZ00265 multidrug resistance 21.5 9.8E+02 0.021 25.3 14.8 17 112-128 74-90 (1466)
355 TIGR02230 ATPase_gene1 F0F1-AT 21.4 2.8E+02 0.0061 19.0 6.3 31 112-142 53-84 (100)
356 COG1289 Predicted membrane pro 21.4 4.2E+02 0.0091 25.0 7.4 36 134-171 62-97 (674)
357 PRK04972 putative transporter; 21.3 6.6E+02 0.014 23.2 8.7 110 102-213 63-184 (558)
358 TIGR03716 R_switched_YkoY inte 21.2 4.2E+02 0.0092 21.0 7.6 25 170-194 9-33 (215)
359 PF09605 Trep_Strep: Hypotheti 21.1 3.9E+02 0.0084 20.5 10.0 55 109-166 36-90 (186)
360 PF11990 DUF3487: Protein of u 21.0 2.4E+02 0.0052 20.0 4.4 42 187-228 18-60 (121)
361 PF10785 NADH-u_ox-rdase: NADH 20.9 2.6E+02 0.0057 18.4 5.7 41 113-153 30-77 (86)
362 PRK11715 inner membrane protei 20.8 6.1E+02 0.013 22.6 10.0 71 161-239 334-404 (436)
363 PRK10692 hypothetical protein; 20.7 2.7E+02 0.0058 18.5 5.0 17 130-146 3-19 (92)
364 PF00860 Xan_ur_permease: Perm 20.4 2.3E+02 0.0049 24.6 5.1 95 95-193 28-129 (389)
365 COG5336 Uncharacterized protei 20.1 3.2E+02 0.0069 19.1 4.9 52 186-237 38-92 (116)
No 1
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.7e-26 Score=194.02 Aligned_cols=188 Identities=40% Similarity=0.737 Sum_probs=175.2
Q ss_pred CCCcCchhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHH
Q 025282 42 PSWFTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIF 121 (255)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 121 (255)
..++..++.+.++++..++.+.|++.+...+ +.+++.||++++..|++.+.+.+.+.++++++
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~-----------------~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~ 88 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVL-----------------KEVQTYFNISDSELGLLQTVFIVVFMIASPLF 88 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhh-----------------HHHHHhcCCCchhccchhHHHHHHHHHHHHHH
Confidence 5666777788999999999999999987633 68899999999999999999999999999999
Q ss_pred HhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhh
Q 025282 122 ASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS 201 (255)
Q Consensus 122 g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 201 (255)
|+++||+.||+++.+|..++.++.++++++..+|++.++|.+.|+|.+.+.++.+++++|.+|.++|++++++++.+..+
T Consensus 89 gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipv 168 (493)
T KOG1330|consen 89 GYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPV 168 (493)
T ss_pred HHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhc-c-chhHHHHHHHHHHHHHHHHHHHHhccCcccc
Q 025282 202 GYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAVLGFVMKPLQLKG 246 (255)
Q Consensus 202 g~~~g~~~~~~l~-~-~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~ 246 (255)
|..+|.+.+..+. . ..|||.|++.+++++++.++.+++.+|..+.
T Consensus 169 GsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 169 GSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred ccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccc
Confidence 9999999999988 3 4499999999999999999998887766543
No 2
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=4.4e-25 Score=191.36 Aligned_cols=181 Identities=18% Similarity=0.297 Sum_probs=164.1
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc
Q 025282 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (255)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 126 (255)
+|+.+..+++.++..++++..++.. .|.+++|+|++.++.+++.+++.+++.+++++.|++.|
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~-----------------~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d 68 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFA-----------------GLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLA 68 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHH-----------------HHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4567778888889999999988763 37899999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhh
Q 025282 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIG 206 (255)
Q Consensus 127 r~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 206 (255)
|+|||+++..++++.+++.+++++++|++.+++.|++.|++.+...+....++.|++|+++|++++++++....+|..++
T Consensus 69 r~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~ 148 (412)
T TIGR02332 69 IIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALG 148 (412)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhc-------cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 207 YVYGGWVG-------HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 207 ~~~~~~l~-------~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
+++++++. ..|||+.|++.+++.++..++.+++.||++
T Consensus 149 ~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 149 LILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred HHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 99998774 259999999998888776666666666665
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=4.4e-24 Score=179.43 Aligned_cols=155 Identities=23% Similarity=0.374 Sum_probs=150.7
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 166 (255)
+.+|.+.+|+|.|..+.|+..++|.++..++.++...+.||+.||++++..+.++.++++++++++||+.++++|++.|+
T Consensus 34 gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~ 113 (394)
T COG2814 34 GLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGL 113 (394)
T ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhcc
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p 241 (255)
..|.+++....+..++.|+++|++++++...+..++.++|.+++.++. ..|||+.|++.+.++++..+..+...|
T Consensus 114 a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 114 AHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999 999999999999999998888888888
No 4
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.92 E-value=3.4e-24 Score=189.90 Aligned_cols=181 Identities=18% Similarity=0.191 Sum_probs=163.4
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc
Q 025282 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (255)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 126 (255)
+|..+..+++..++..+|+...+. ++|.+.+|+|.+.++.+|+.+.+.++..+++++.|+++|
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~-----------------a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D 66 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHV-----------------AAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGD 66 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677888899999999988875 448999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcC-cccchhHHHHHHHhhhhhhhhh
Q 025282 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNA-PVAKKTAWLGVFYMCLPSGYAI 205 (255)
Q Consensus 127 r~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~ 205 (255)
|+|||++++++.++++++.+++++++|++.++++|+++|++.+...+.....+.+.+ |+++|+++++++.....+|..+
T Consensus 67 ~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 67 RIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999888888887765 6789999999999999999999
Q ss_pred hhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 206 GYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 206 g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
||.+++++. +.+|||.|++...+.++..++.++..|+++
T Consensus 147 gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 147 GPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999998 889999999988877777666666667654
No 5
>PRK03545 putative arabinose transporter; Provisional
Probab=99.91 E-value=3.6e-23 Score=178.13 Aligned_cols=156 Identities=19% Similarity=0.234 Sum_probs=144.8
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
.+|.+++++|.+.++.++..+.+.+++.+++++.|++.||+|||+++..+.++.+++++.+++++|++.+++.|+++|++
T Consensus 31 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~ 110 (390)
T PRK03545 31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFA 110 (390)
T ss_pred chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
.+...+...+++.|++|+++|++++++.+....+|..++|++++.+. ..|||+.|++.+++.++..+..+...|+.
T Consensus 111 ~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 111 HAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999988 78999999999988777666655555554
No 6
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.91 E-value=1.3e-23 Score=179.40 Aligned_cols=161 Identities=11% Similarity=0.043 Sum_probs=138.0
Q ss_pred CCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 025282 85 TCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 164 (255)
+.|.+|.+++|+|++.++.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+.....++++.+++.|++.
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~ 89 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLA 89 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34677899999999999999999999999999999999999999999887666555545443333337999999999999
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
|++.+. .......++|++|+++|++++++.+.+..+|.++++++++++. +.|||+.|++.+++.++..++.+++.||+
T Consensus 90 G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~ 168 (368)
T TIGR00903 90 ALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPAL 168 (368)
T ss_pred HhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999986 4556666799999999999999999999999999999999998 89999999998888887777777777877
Q ss_pred ccc
Q 025282 244 LKG 246 (255)
Q Consensus 244 ~~~ 246 (255)
+++
T Consensus 169 p~~ 171 (368)
T TIGR00903 169 PFQ 171 (368)
T ss_pred CCC
Confidence 654
No 7
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.91 E-value=1e-22 Score=175.52 Aligned_cols=157 Identities=17% Similarity=0.180 Sum_probs=143.7
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
.+|.+.+++|.++++.++..+++.++..+++++.|++.||+|||+.++.+.++.+++.+++.++++++.+++.|++.|++
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 121 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLA 121 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHh
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
.+...+...+++.|++|+++|++++++.....++|..++|++++.+. ..+||+.|++.+++.++..+......||.+
T Consensus 122 ~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 122 LGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred hHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999999999999999999999999998 889999999988777665555444456543
No 8
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.91 E-value=3.1e-23 Score=189.06 Aligned_cols=184 Identities=15% Similarity=0.143 Sum_probs=156.1
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc
Q 025282 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (255)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 126 (255)
.|.+++++++..+...++...++. ++|.+.++++++..+.+++.+++.++.+++++++|+++|
T Consensus 165 ~~~l~~i~~l~~~~~g~d~~~is~-----------------ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsD 227 (742)
T TIGR01299 165 QWALFFVLGLALMADGVEVFVVGF-----------------VLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLAD 227 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555666666666655543 447899999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhh
Q 025282 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIG 206 (255)
Q Consensus 127 r~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 206 (255)
|+|||+++++++++.+++.++++++++++.++++|++.|++.|...+....++.|++|+++|++.+++...++.+|.+++
T Consensus 228 R~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila 307 (742)
T TIGR01299 228 KLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYA 307 (742)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhc-c-------------chhHHHHHHHHHHHHHHHHHHHHhccCcccccc
Q 025282 207 YVYGGWVG-H-------------YNWRYAFWGEAILMFPFAVLGFVMKPLQLKGAC 248 (255)
Q Consensus 207 ~~~~~~l~-~-------------~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 248 (255)
+.++..+. . .+||+.+++.+++.++.. +..++.||+|++..
T Consensus 308 ~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~~~lPESPrwL~ 362 (742)
T TIGR01299 308 AAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAI-GALTFMPESPRFFL 362 (742)
T ss_pred HHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHH
Confidence 88765543 2 369999988877665544 44556799987743
No 9
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.90 E-value=3.2e-24 Score=178.77 Aligned_cols=183 Identities=19% Similarity=0.233 Sum_probs=169.9
Q ss_pred CchhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhh
Q 025282 46 TPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLA 125 (255)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 125 (255)
.+++++..+++++...|+.|..++. ++|.+.+|.++|.+|.|.+.+.+.+++.++..+.|.++
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~-----------------a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~s 88 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNL-----------------AMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLS 88 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhh-----------------ccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 4456778888999999999998876 45899999999999999999999999999999999999
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhh
Q 025282 126 RSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI 205 (255)
Q Consensus 126 dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 205 (255)
||.++|+.+..++++.++.+++++++++.+.+.+..++.|..+|...|.+...+..|+++++||+..++++.+.++|..+
T Consensus 89 Dr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal 168 (448)
T COG2271 89 DRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGAL 168 (448)
T ss_pred ccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhh--hhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCccc
Q 025282 206 GYVYG--GWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 206 g~~~~--~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
.|++. +++. +.+||..|++.++++++..++.++..+++|+
T Consensus 169 ~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 169 APLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 99988 7777 7899999999999999988888777555543
No 10
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.90 E-value=6.1e-23 Score=179.10 Aligned_cols=180 Identities=18% Similarity=0.261 Sum_probs=156.3
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc
Q 025282 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS 127 (255)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 127 (255)
+++....++.++..++++..++. .+|.+.+++|++..+.+++.+.+.+++.+++++.|++.||
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr 84 (434)
T PRK11663 22 RHILITMYLGYALFYFTRKSFNA-----------------AMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR 84 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHH-----------------hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh
Confidence 34555556666666666655543 3478999999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhh
Q 025282 128 VNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGY 207 (255)
Q Consensus 128 ~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 207 (255)
+|||+++.++.++.+++.++++++++++.+++.|++.|++.|..++....++.|++|+++|++++++.+....+|..++|
T Consensus 85 ~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~ 164 (434)
T PRK11663 85 SNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIP 164 (434)
T ss_pred cCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred hhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 208 VYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 208 ~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
++.+++. ..|||+.|++.+++.++..++..+..||++
T Consensus 165 ~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p 202 (434)
T PRK11663 165 LVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKP 202 (434)
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999988 889999999988877665555544445443
No 11
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.90 E-value=1.8e-22 Score=174.44 Aligned_cols=183 Identities=19% Similarity=0.242 Sum_probs=160.7
Q ss_pred CchhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhh
Q 025282 46 TPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLA 125 (255)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 125 (255)
++|....+.++..+..+++....+. ..|.+.+++|.++++.+++.+.+.++..+++++.|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~ 74 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGV-----------------AAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLA 74 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666777777788887776654 34789999999999999999999999999999999999
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhh
Q 025282 126 RSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI 205 (255)
Q Consensus 126 dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 205 (255)
||+|||+++..+.++..++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+
T Consensus 75 dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 154 (406)
T PRK11551 75 DRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGAL 154 (406)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCccc
Q 025282 206 GYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 206 g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
++.+++.+. ..+||+.|++.+++.++..++..++.||+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 195 (406)
T PRK11551 155 ASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRA 195 (406)
T ss_pred HHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 999988877 8899999999887766665555555566543
No 12
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.90 E-value=3.8e-22 Score=173.03 Aligned_cols=160 Identities=14% Similarity=0.142 Sum_probs=145.7
Q ss_pred CCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 025282 85 TCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 164 (255)
+.|.+|.+.++++.+..+.++..+++.+++.+++++.|+++||+|||++++.+.++.+++.+++.++++++.++++|+++
T Consensus 35 ~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 114 (413)
T PRK15403 35 IQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQ 114 (413)
T ss_pred hccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
|++.+...+....++.|++|+++|++++++......+|..+||.+++.+. ..|||+.|++.+++.++..+..++..||+
T Consensus 115 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 115 GTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99988777777888999999999999999999999999999999999888 78999999999988777666555556765
Q ss_pred c
Q 025282 244 L 244 (255)
Q Consensus 244 ~ 244 (255)
+
T Consensus 195 ~ 195 (413)
T PRK15403 195 V 195 (413)
T ss_pred c
Confidence 4
No 13
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.89 E-value=1.6e-23 Score=184.32 Aligned_cols=180 Identities=15% Similarity=0.131 Sum_probs=155.5
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc
Q 025282 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (255)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 126 (255)
.+.++..+++.++..+.++..++. +.|.+.+|+|++..+.|++.+++.+++.+++++.|+++|
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~-----------------~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~D 89 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKA-----------------AQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYAD 89 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhh-----------------hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhh
Confidence 445667777888889999988875 347999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhh
Q 025282 127 SVNPFRLIGVGLTVWTLAVVGCGF-----SFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS 201 (255)
Q Consensus 127 r~G~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 201 (255)
|+|||+++..+.++.++..+..++ +++++.+++.|++.|++.+...+....+++|++|+++||+++|+++....+
T Consensus 90 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~l 169 (467)
T PRK09556 90 GKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNL 169 (467)
T ss_pred ccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccch
Confidence 999999999888888877776665 589999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhc-c---chhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 202 GYAIGYVYGGWVG-H---YNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 202 g~~~g~~~~~~l~-~---~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
|.++++++..++. . .+||..|.+.+++.++..++.+++.+++
T Consensus 170 G~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~ 215 (467)
T PRK09556 170 GGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDS 215 (467)
T ss_pred hhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999998887665 3 2699999988888777666666554433
No 14
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.89 E-value=3.8e-22 Score=171.36 Aligned_cols=157 Identities=18% Similarity=0.270 Sum_probs=144.5
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
.+|.+++|+|.+.++.++..+.+.++..+++++.|++.||+|||+++..+.++.+++.++++++++++.+++.|++.|++
T Consensus 25 ~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~ 104 (382)
T PRK10091 25 VLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFP 104 (382)
T ss_pred ChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
.+...+....++.|++|+++|++++++...+..+|..++|++++++. ..+||+.|++.+++.++..+..++..||.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 105 HGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred hHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99988888899999999999999999999999999999999999888 789999999998887766665555567643
No 15
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.89 E-value=3.2e-22 Score=172.22 Aligned_cols=181 Identities=15% Similarity=0.185 Sum_probs=157.7
Q ss_pred CchhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhh
Q 025282 46 TPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLA 125 (255)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 125 (255)
.+++.+..+++.++..+++....+. +.|.+++++|++..+.+++.+++.++..+++++.|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~ 71 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVAL-----------------VLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWG 71 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556777778888888888877764 44789999999999999999999999999999999999
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhh
Q 025282 126 RSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI 205 (255)
Q Consensus 126 dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 205 (255)
||+|||++++++.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+
T Consensus 72 Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~ 151 (405)
T TIGR00891 72 DRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVV 151 (405)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhc-cch--hHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 206 GYVYGGWVG-HYN--WRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 206 g~~~~~~l~-~~~--w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
++.+++.+. ..+ ||+.|++.++..++.. +.....||++
T Consensus 152 ~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~ 192 (405)
T TIGR00891 152 AAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAE 192 (405)
T ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCCh
Confidence 999999887 544 9999988765554433 3333446543
No 16
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.89 E-value=2.2e-22 Score=177.62 Aligned_cols=177 Identities=20% Similarity=0.372 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccC
Q 025282 50 LLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN 129 (255)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G 129 (255)
.+..+++..++..++...... ++|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-----------------~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 65 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNV-----------------AIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFG 65 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhC
Confidence 445556666777777665543 448999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhh
Q 025282 130 PFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVY 209 (255)
Q Consensus 130 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 209 (255)
||+.++++.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|+++++++.....+|..+||.+
T Consensus 66 ~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 145 (485)
T TIGR00711 66 TRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTL 145 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 210 GGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 210 ~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
++++. +.+||+.|++.+.+.++..++.+++.|++
T Consensus 146 ~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 146 GGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred HhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCc
Confidence 99998 89999999998888777666666665654
No 17
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.89 E-value=7.1e-22 Score=169.13 Aligned_cols=158 Identities=15% Similarity=0.238 Sum_probs=146.0
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 166 (255)
|.+|.+.+++|.++++.+++.+++.++..+++++.|++.||+|||+.+..+.++.+++.+++.++++++.+++.|++.|+
T Consensus 26 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 105 (385)
T TIGR00710 26 PAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAF 105 (385)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
+.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+. ..+||+.|++.+++.++..+..++..||++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 106 GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999888 789999999988887777666666556544
No 18
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.89 E-value=4.8e-22 Score=173.42 Aligned_cols=179 Identities=12% Similarity=0.053 Sum_probs=140.0
Q ss_pred hHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCccccccccc---CCcchhHHHH---HHHHHHHHhHhhHHH
Q 025282 49 RLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFD---LNNFQDGVLS---SAFMVGLLVASPIFA 122 (255)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~~~~~---~~~~~~~~~~~~~~g 122 (255)
+.+...+++.++.++|+..++.. .|.+.++++ .+..+.+... +...++..++++++|
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~-----------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G 84 (432)
T PRK10406 22 WAIVGASSGNLVEWFDFYVYSFC-----------------SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFG 84 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667788899998887653 368888884 4444444443 444555559999999
Q ss_pred hhhcccCchHHHHHHHHHHHHHHHHHHHhhhHH--------HHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHH
Q 025282 123 SLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFW--------MIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGV 194 (255)
Q Consensus 123 ~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~ 194 (255)
+++||+|||+++.++.++++++++++++++++. .+++.|+++|++.|..++...++++|++|+++|+++.++
T Consensus 85 ~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~ 164 (432)
T PRK10406 85 RIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASF 164 (432)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHH
Confidence 999999999999999999999999999988764 588999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhhhhhhhhhhc---------cchhHHHHHHHHHHHHHHHHHHHHhccCccc
Q 025282 195 FYMCLPSGYAIGYVYGGWVG---------HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 195 ~~~~~~~g~~~g~~~~~~l~---------~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
.+.+...|..+++.+...+. ..|||+.|++.+++.++... .....||+++
T Consensus 165 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~ 223 (432)
T PRK10406 165 QYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQ 223 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCch
Confidence 88888888888776654432 47999999988777655432 2233455543
No 19
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.88 E-value=9.4e-22 Score=166.12 Aligned_cols=154 Identities=27% Similarity=0.472 Sum_probs=139.4
Q ss_pred cc-cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 89 GT-GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 89 ~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
+| .+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++..++++.+.+++.|++.|++
T Consensus 19 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 98 (352)
T PF07690_consen 19 LPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIG 98 (352)
T ss_dssp HH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccc
Confidence 36 78899999999999999999999999999999999999999999999999999977766778888999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccC
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~ 242 (255)
.+...+....++.|++|+++|++++++.+....+|..++|.+++.+. ..+||+.|++.+++.++..++..++.++
T Consensus 99 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~ 174 (352)
T PF07690_consen 99 SGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPE 174 (352)
T ss_dssp HHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC--
T ss_pred cccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhh
Confidence 99999999999999999999999999999999999999999999998 8899999999999888877754444443
No 20
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.88 E-value=8.3e-22 Score=173.41 Aligned_cols=199 Identities=17% Similarity=0.198 Sum_probs=160.6
Q ss_pred CchhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCC-----CCCCcccccccccCCcchhHHHHHHHHHHHHhHhhH
Q 025282 46 TPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANG-----TCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPI 120 (255)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 120 (255)
.++.+..++++...+.+.++..++.......-.+.++.. ..|.......|++++..+.|++.+.+.+++.+++++
T Consensus 16 ~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~ 95 (465)
T TIGR00894 16 FRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIP 95 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcc
Confidence 445566677778888999999887754322111111100 011112223378999999999999999999999999
Q ss_pred HHhhhcccCchHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhh
Q 025282 121 FASLARSVNPFRLIGVGLTVWTLAVVGCGFS--FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMC 198 (255)
Q Consensus 121 ~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 198 (255)
.|+++||+|||+++..+.++.+++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++...+
T Consensus 96 ~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 175 (465)
T TIGR00894 96 VGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSG 175 (465)
T ss_pred hHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887654 46888999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhc-c-chhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 199 LPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 199 ~~~g~~~g~~~~~~l~-~-~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
..+|.++++++++.+. . .+||+.|++.+++.++..++.+.+.++++
T Consensus 176 ~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p 223 (465)
T TIGR00894 176 FQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDP 223 (465)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCc
Confidence 9999999999999988 6 49999999999988777766666555443
No 21
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.88 E-value=1.2e-21 Score=170.41 Aligned_cols=165 Identities=18% Similarity=0.222 Sum_probs=148.2
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc
Q 025282 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (255)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 126 (255)
+++.+..+.+.++...++...... ++|.+++++|+++.+.++..+++.++..+++++.|+++|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~d 78 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFY-----------------IMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLAD 78 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666777777777766543 457899999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhh
Q 025282 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIG 206 (255)
Q Consensus 127 r~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 206 (255)
|+|||+++.++.++.+++.++++++++++.++++|++.|++.+..++....++.|++|+++|+++.++...+..+|.+++
T Consensus 79 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~ 158 (426)
T PRK12307 79 KFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIA 158 (426)
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhc-cchhHHHHHHHHHH
Q 025282 207 YVYGGWVG-HYNWRYAFWGEAIL 228 (255)
Q Consensus 207 ~~~~~~l~-~~~w~~~f~~~~~~ 228 (255)
+.+.+.+. ..+||+.|++....
T Consensus 159 ~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 159 AYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HHHHHHHcccCCHHHHHHHHHHH
Confidence 99988887 78999999885543
No 22
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.88 E-value=2.5e-21 Score=166.95 Aligned_cols=147 Identities=13% Similarity=0.104 Sum_probs=135.1
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 166 (255)
|++|.+++|+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+..+++++.++++++++++.+++.|++.|+
T Consensus 30 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gi 109 (393)
T PRK09705 30 PLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGV 109 (393)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHh
Confidence 46689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c-chhHHHHHHHHHHHHHHHH
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAV 234 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-~~w~~~f~~~~~~~~~~~~ 234 (255)
+.+...+....++.|++| ++|+++++++..+...|..+|+.+++++. + .+||+.+.+.++..++..+
T Consensus 110 g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 110 GIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF 178 (393)
T ss_pred HHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 88999999999999999999999998887 4 4899988877666544433
No 23
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.88 E-value=1.5e-21 Score=166.15 Aligned_cols=153 Identities=16% Similarity=0.072 Sum_probs=138.4
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
.+|.+++++|++..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++
T Consensus 25 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 104 (377)
T TIGR00890 25 LAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAG 104 (377)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 44799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhcc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p 241 (255)
.+..++.....+.|++| ++|+++.++......+|..+++++.+.+. ..+||+.|++.+++.++..+..+++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 178 (377)
T TIGR00890 105 VGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIG 178 (377)
T ss_pred HHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhee
Confidence 99988888888999987 68999999999999999887766666666 789999999999888777766655543
No 24
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.88 E-value=1.8e-21 Score=171.64 Aligned_cols=181 Identities=16% Similarity=0.228 Sum_probs=147.2
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccc--------cCCcchhHHHHHHHHHHHHhHhh
Q 025282 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDF--------DLNNFQDGVLSSAFMVGLLVASP 119 (255)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~~~~~~~~~ 119 (255)
.+...+..+..+...++...++. .+|.+++++ +.+..+.+++.+++.++..++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~ 73 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISG-----------------TVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGA 73 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehH-----------------hHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHH
Confidence 34455555666666666655543 335566655 88889999999999999999999
Q ss_pred HHHhhhcccCchHHHHHHHHHHHHHHHHHHHh------------hhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccc
Q 025282 120 IFASLARSVNPFRLIGVGLTVWTLAVVGCGFS------------FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAK 187 (255)
Q Consensus 120 ~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~ 187 (255)
++|+++||+|||++++++.++.+++.+++++. ..++.++++|++.|++.|...+...++++|++|+++
T Consensus 74 ~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~ 153 (479)
T PRK10077 74 LGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI 153 (479)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh
Confidence 99999999999999999999999988887763 235678899999999999999999999999999999
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhhhhhc---------cchhHHHHHHHHHHHHHHHHHHHHhccCcccc
Q 025282 188 KTAWLGVFYMCLPSGYAIGYVYGGWVG---------HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKG 246 (255)
Q Consensus 188 r~~~~~~~~~~~~~g~~~g~~~~~~l~---------~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~ 246 (255)
|++++++.+.+..+|.++++.++..+. ..+||+.|++.+++.++..+. .++.||++++
T Consensus 154 rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~ 220 (479)
T PRK10077 154 RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRY 220 (479)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHH
Confidence 999999999999999998887765432 468999999988877766544 4456777643
No 25
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.87 E-value=5.3e-22 Score=169.62 Aligned_cols=156 Identities=24% Similarity=0.332 Sum_probs=144.4
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
+.|.+++++|.+..+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++
T Consensus 16 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 95 (399)
T TIGR00893 16 AAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAA 95 (399)
T ss_pred hHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 44789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
.+...+....++.|++|+++|++++++.+....+|..+++.+++.+. ..+||+.|++.+++.++..+..+++.|++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (399)
T TIGR00893 96 EAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDP 172 (399)
T ss_pred HHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCC
Confidence 99999999999999999999999999999999999999999999887 88999999999888777666665554443
No 26
>PRK03699 putative transporter; Provisional
Probab=99.87 E-value=5.1e-21 Score=164.99 Aligned_cols=173 Identities=16% Similarity=0.104 Sum_probs=149.6
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc
Q 025282 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS 127 (255)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 127 (255)
++.....++.++....+...++. .+|.+++++|+|+++.+++.+.+.+++.+++++.|++.||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~-----------------~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr 68 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGM-----------------VMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEI 68 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh-----------------hhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555666666665554543 4479999999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhh
Q 025282 128 VNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGY 207 (255)
Q Consensus 128 ~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 207 (255)
+|||+++..+.++.+++.++++++++++.+++.|++.|++.+...+....++.|++|+++|+.+++..+....+|..++|
T Consensus 69 ~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 148 (394)
T PRK03699 69 IPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFP 148 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999889999999999999999999999888899999999
Q ss_pred hhhhhhc--cchhHHHHHHHHHHHHHHHHHHH
Q 025282 208 VYGGWVG--HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 208 ~~~~~l~--~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
.+.+.+. ..+||+.|.+.+++.++..++.+
T Consensus 149 ~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 149 IIAAYLLARSIEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 8888765 57999999998887766555444
No 27
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.87 E-value=2.4e-21 Score=171.62 Aligned_cols=180 Identities=12% Similarity=0.134 Sum_probs=144.2
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcch-hHHH-----HHHHHHHHHhHhhHH
Q 025282 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQ-DGVL-----SSAFMVGLLVASPIF 121 (255)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~~-----~~~~~~~~~~~~~~~ 121 (255)
++.+....++.++.++|...++.. .|.+.++++.+.++ .+++ .++..++..+++++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~ 77 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFV-----------------AYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFF 77 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666778888899988877653 36888888644322 2222 477788999999999
Q ss_pred HhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHH--------HHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHH
Q 025282 122 ASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWM--------IAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLG 193 (255)
Q Consensus 122 g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~ 193 (255)
|+++||+|||+++.+++++++++++++++++|++. +++.|+++|++.|..++....+++|++|+++||++.+
T Consensus 78 G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~ 157 (490)
T PRK10642 78 GMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGS 157 (490)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHH
Confidence 99999999999999999999999999999999874 8899999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhhhhhhhc---------cchhHHHHHHHHHHHHHHHHHHHHhccCccc
Q 025282 194 VFYMCLPSGYAIGYVYGGWVG---------HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 194 ~~~~~~~~g~~~g~~~~~~l~---------~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
+.+.+..+|..+|+.+...+. .+|||+.|++.+++.++ .++.....||+++
T Consensus 158 ~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~ 217 (490)
T PRK10642 158 WLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPA 217 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChh
Confidence 999888888888876554331 47999999997765554 3333344577654
No 28
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.87 E-value=4.1e-21 Score=166.12 Aligned_cols=158 Identities=14% Similarity=0.088 Sum_probs=143.5
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 166 (255)
|.+|.+.+++|.+..+.++..+.+.+++.+++++.|+++||+|||++++.+..+.+++.+++.++++++.+++.|++.|+
T Consensus 34 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 113 (406)
T PRK15402 34 PGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGI 113 (406)
T ss_pred cchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 45578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
+.+...+...+.+.|.+|+++|.++.++......+|..++|.+++.+. ..+||+.|++.+++.++..+..++..||++
T Consensus 114 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 114 GLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred HhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999988889999999999999999999998888889999999999888 789999999988887776666555566654
No 29
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.87 E-value=2.7e-21 Score=169.42 Aligned_cols=156 Identities=17% Similarity=0.236 Sum_probs=134.2
Q ss_pred CcccccccccCC--------cchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh---hHHH
Q 025282 88 PGTGIQGDFDLN--------NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF---SFWM 156 (255)
Q Consensus 88 ~~~~~~~~~~~s--------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~---~~~~ 156 (255)
+++.+..+++.+ ..+.+++.+++.++..+++++.|+++||+|||++++++.++..++.+++.+.. +++.
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (481)
T TIGR00879 50 ALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEM 129 (481)
T ss_pred hhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHH
Confidence 346777777766 78999999999999999999999999999999999999999999998886543 4568
Q ss_pred HHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhh---hhhc-cchhHHHHHHHHHHHHHH
Q 025282 157 IAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG---GWVG-HYNWRYAFWGEAILMFPF 232 (255)
Q Consensus 157 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~l~-~~~w~~~f~~~~~~~~~~ 232 (255)
+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|..+++.++ .... ..+||+.|++.++..++.
T Consensus 130 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~ 209 (481)
T TIGR00879 130 LIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL 209 (481)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 6655 789999999976655544
Q ss_pred HHHHHHhccCcc
Q 025282 233 AVLGFVMKPLQL 244 (255)
Q Consensus 233 ~~~~~~~~p~~~ 244 (255)
.+. .++.||++
T Consensus 210 ~~~-~~~l~~~~ 220 (481)
T TIGR00879 210 FLG-LFFLPESP 220 (481)
T ss_pred HHH-HhcCCCCh
Confidence 433 34456654
No 30
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.87 E-value=9.9e-21 Score=167.01 Aligned_cols=153 Identities=15% Similarity=0.083 Sum_probs=131.8
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
.+|.+++++|++.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++
T Consensus 58 ~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~ 137 (476)
T PLN00028 58 LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFS 137 (476)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc----------cchhHHHHHHHHHHHHHHHHHHH
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG----------HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~----------~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
.+... ....++.|++|+++|++++++......+|..+++.+.+.+. ..|||+.|++.+++.++..++.+
T Consensus 138 ~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~ 216 (476)
T PLN00028 138 LATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVL 216 (476)
T ss_pred HHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 88654 45668899999999999999998877777777766554432 14899999999998877776666
Q ss_pred Hhcc
Q 025282 238 VMKP 241 (255)
Q Consensus 238 ~~~p 241 (255)
++.+
T Consensus 217 ~~~~ 220 (476)
T PLN00028 217 TLGQ 220 (476)
T ss_pred HHcC
Confidence 5543
No 31
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.87 E-value=7.4e-21 Score=163.86 Aligned_cols=158 Identities=13% Similarity=0.151 Sum_probs=143.0
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 166 (255)
|.+|.+.+++|.++.+.++..+++.++..+++++.|+++||+|||+.+..+.++..++.+++.++++++.+++.|++.|+
T Consensus 29 p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 108 (394)
T PRK11652 29 PAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGL 108 (394)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
+.+...+....+..|.+++++++++.++.+.+..++..++|.+++.+. ..+||+.|++.+++.++..+...++.||++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 109 GTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999888888889999999999999999999999999999999999888 789999999988877666555555556653
No 32
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=4.8e-21 Score=163.88 Aligned_cols=160 Identities=21% Similarity=0.341 Sum_probs=147.3
Q ss_pred CCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 025282 85 TCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 164 (255)
+.|.+|.+.+++|+++.+.+++.+++.++..+++++.|+++||+|||+.+..+.++.+++.+++.++++++.+++.|++.
T Consensus 10 ~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 89 (377)
T PRK11102 10 YLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLH 89 (377)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+. ..+||+.|++.+++.++..+...+..||+
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (377)
T PRK11102 90 GLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPET 169 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999999999999999888 78999999998888777666665555654
Q ss_pred c
Q 025282 244 L 244 (255)
Q Consensus 244 ~ 244 (255)
+
T Consensus 170 ~ 170 (377)
T PRK11102 170 L 170 (377)
T ss_pred C
Confidence 3
No 33
>TIGR00898 2A0119 cation transport protein.
Probab=99.87 E-value=3.9e-21 Score=170.76 Aligned_cols=157 Identities=19% Similarity=0.279 Sum_probs=143.2
Q ss_pred CCcccccccccCC---cchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 025282 87 TPGTGIQGDFDLN---NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRML 163 (255)
Q Consensus 87 ~~~~~~~~~~~~s---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 163 (255)
+..+.+.+|+|++ ..+.++..+++.++..+++++.|+++||+|||++++++.++.+++.++.+++++++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 5678999999998 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 164 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
.|++.+...+....++.|++|+++|+++.++.+.+..+|.++++.++..+ .+||+.|++.+++.++..+.. ++.||+
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~~wr~~~~~~~i~~~~~~~~~-~~~~es 266 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI--PDWRWLQLAVSLPTFLFFLLS-WFVPES 266 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 99999999999999999999999999999999999999999999887666 459999999998877666555 456777
Q ss_pred ccc
Q 025282 244 LKG 246 (255)
Q Consensus 244 ~~~ 246 (255)
+++
T Consensus 267 p~~ 269 (505)
T TIGR00898 267 PRW 269 (505)
T ss_pred hHH
Confidence 653
No 34
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.86 E-value=5.2e-21 Score=169.93 Aligned_cols=183 Identities=19% Similarity=0.135 Sum_probs=150.5
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCccccccc-----ccCCcchhHHHHHHHHHHHHhHhhHH
Q 025282 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGD-----FDLNNFQDGVLSSAFMVGLLVASPIF 121 (255)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~s~~~~~~~~~~~~~~~~~~~~~~ 121 (255)
.++.+.++.++.+..+++...++.. +|.+..+ .+.+..+.+++.+.+.++..++++++
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~ 76 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLV-----------------TKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFF 76 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666777788888888776642 2444443 23456677899999999999999999
Q ss_pred HhhhcccCchHHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHH
Q 025282 122 ASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS------FWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVF 195 (255)
Q Consensus 122 g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~ 195 (255)
|+++||+|||+.+.+++++..++.++++++++ ++.+++.|++.|++.|...+....+++|++|+++|++++++.
T Consensus 77 g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~ 156 (502)
T TIGR00887 77 GWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAV 156 (502)
T ss_pred HHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHH
Confidence 99999999999999999999999998888765 789999999999999999999999999999999999999999
Q ss_pred Hhhhhhhhhhhhhhhhhhc------------------------cchhHHHHHHHHHHHHHHHHHHHHhccCccccc
Q 025282 196 YMCLPSGYAIGYVYGGWVG------------------------HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKGA 247 (255)
Q Consensus 196 ~~~~~~g~~~g~~~~~~l~------------------------~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 247 (255)
+....+|.++++.++..+. ..+||+.|.+.+++.++..+. .++.||++++.
T Consensus 157 ~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESpr~l 231 (502)
T TIGR00887 157 FAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIPETPRYT 231 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCCCCHHHH
Confidence 9999999999988876542 247999998887776654444 34569998763
No 35
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.86 E-value=1.2e-20 Score=167.26 Aligned_cols=165 Identities=18% Similarity=0.300 Sum_probs=149.1
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc
Q 025282 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (255)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 126 (255)
+++.+..+++..++..++....+. .+|.+.+++|++..+.+++.+.+.++..+++++.|+++|
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 80 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITL-----------------VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGD 80 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666777777777777766653 347899999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhh
Q 025282 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIG 206 (255)
Q Consensus 127 r~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 206 (255)
|+|||+.++.+.++.+++.++++++++++.+++.|++.|++.+..++....++.|++|+++|++++++......+|..++
T Consensus 81 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 160 (496)
T PRK03893 81 RYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVA 160 (496)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhc-cchhHHHHHHHHHH
Q 025282 207 YVYGGWVG-HYNWRYAFWGEAIL 228 (255)
Q Consensus 207 ~~~~~~l~-~~~w~~~f~~~~~~ 228 (255)
|.+.+.+. ..+||+.|++.++.
T Consensus 161 ~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 161 AQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHhccCCHHHHHHHHHHH
Confidence 99999888 89999999875443
No 36
>PRK10504 putative transporter; Provisional
Probab=99.86 E-value=1.3e-20 Score=166.02 Aligned_cols=156 Identities=16% Similarity=0.206 Sum_probs=142.6
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.+++.++++++.+++.|+++|++
T Consensus 32 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~ 111 (471)
T PRK10504 32 ALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVG 111 (471)
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhh
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
.+...+....++.|++|+++|+++.++.....++|..+||.+++.+. ..+||+.|++...+..+..+......|+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 112 GAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred hHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999988 88999999998877766666665555543
No 37
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.86 E-value=1.4e-21 Score=166.43 Aligned_cols=156 Identities=16% Similarity=0.259 Sum_probs=141.8
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
++|.+++++|++..+.+++.+++.++..+++++.|+++||+|||+.+.++.++.+++.+++.++++++.+++.|++.|++
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 96 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIF 96 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 44789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhh-hhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGY-VYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
.+...+...+++.|++|+++|++++++.+.+..+|..++| .+++.+. ..+||+.|++.+++.++..++.+++.|++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 97 QGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred ccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCC
Confidence 9999999999999999999999999999999999999999 4666666 78999999998887777666665555543
No 38
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.86 E-value=6.2e-21 Score=167.33 Aligned_cols=179 Identities=14% Similarity=0.092 Sum_probs=145.3
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc
Q 025282 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS 127 (255)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 127 (255)
|.++...++.....+.++..++. .+|++.++ |++..+.++..+.+.++..+++++.|+++||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr 89 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFAL-----------------AMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR 89 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------------hhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 44444455556666666554443 33688888 9999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhh
Q 025282 128 VNPFRLIGVGLTVWTLAVVGCGFSF----SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGY 203 (255)
Q Consensus 128 ~G~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 203 (255)
+|||++++++.++.+++.+.+++.+ +++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+..+|.
T Consensus 90 ~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 169 (452)
T PRK11273 90 SNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGG 169 (452)
T ss_pred cCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999998888763 788889999999999999888888889999999999999999999999887
Q ss_pred h-hhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 204 A-IGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 204 ~-~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
. .+|+++..+. ..+||+.|++.+++.++..++.+++.||++
T Consensus 170 ~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 170 GLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 4 4555544444 569999999998887776666666556543
No 39
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.86 E-value=1.6e-20 Score=159.86 Aligned_cols=155 Identities=19% Similarity=0.208 Sum_probs=130.2
Q ss_pred Cccc-ccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHH
Q 025282 88 PGTG-IQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVG 165 (255)
Q Consensus 88 ~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G 165 (255)
.+|. +++++|+++.+.+++.+++.++..+++++.|+++||+|||+.++++.++.+++.+++++++ +++.+++.|++.|
T Consensus 23 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g 102 (366)
T TIGR00886 23 LAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIG 102 (366)
T ss_pred hhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4464 8999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c----------chhHHHH-HHHHHHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H----------YNWRYAF-WGEAILMFPFA 233 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~----------~~w~~~f-~~~~~~~~~~~ 233 (255)
++.+. .+....++.|++|+++|++++++.....++|..+++.+++.+. . .+||+.| ...+++..+..
T Consensus 103 ~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 181 (366)
T TIGR00886 103 IAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPA 181 (366)
T ss_pred Hhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHH
Confidence 98654 4667889999999999999999999888888888877776554 1 3799999 44455554444
Q ss_pred HHHHHhccCc
Q 025282 234 VLGFVMKPLQ 243 (255)
Q Consensus 234 ~~~~~~~p~~ 243 (255)
++.+.+.+++
T Consensus 182 ~~~~~~~~~~ 191 (366)
T TIGR00886 182 LLIFFVGADT 191 (366)
T ss_pred HHHHHhcccC
Confidence 4444444443
No 40
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.85 E-value=3.1e-20 Score=157.50 Aligned_cols=150 Identities=17% Similarity=0.121 Sum_probs=137.6
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-----SFWMIAICRMLV 164 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~ 164 (255)
|.+..+++.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..+.. +++.+++.|++.
T Consensus 23 ~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (365)
T TIGR00900 23 PLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGIL 102 (365)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 677788999999999999999999999999999999999999999999999999888888887 999999999999
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
|++.+...+...+++.|++|+++|++++++.+....+|..+||.+++.+. ..+||+.|++.++..++..+..+..
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 103 AIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988 8899999998887666555544444
No 41
>TIGR00895 2A0115 benzoate transport.
Probab=99.85 E-value=6.4e-21 Score=163.54 Aligned_cols=179 Identities=21% Similarity=0.387 Sum_probs=153.6
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc
Q 025282 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS 127 (255)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 127 (255)
++.+...++..+...++....+. ..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 78 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGF-----------------AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADR 78 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----------------hHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34444455555555555444432 3378899999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhh
Q 025282 128 VNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGY 207 (255)
Q Consensus 128 ~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 207 (255)
+|||+.+..+.++.+++.+++.+.++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++
T Consensus 79 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 158 (398)
T TIGR00895 79 IGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGG 158 (398)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 208 VYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 208 ~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
.+++.+. ..+||+.|++.+++.++..++.+.+.|+.
T Consensus 159 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 159 FLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred HHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 9999988 88999999998766666666555555654
No 42
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.85 E-value=3.9e-20 Score=159.26 Aligned_cols=157 Identities=15% Similarity=0.182 Sum_probs=144.1
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
++|.+.+++|.+..+.++..+.+.++..+++++.|+++||+|||+.+..+.++.+++.+++.++++++.+++.|++.|++
T Consensus 25 ~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~ 104 (392)
T PRK10473 25 GLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIG 104 (392)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
.+...+....++.|++|+++|+++.++.+....+|..++|.+++.+. ..+||+.|++.+++.++..++.++..||++
T Consensus 105 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 105 AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999998887 789999999998887777766655556543
No 43
>PRK15075 citrate-proton symporter; Provisional
Probab=99.85 E-value=2.1e-20 Score=163.13 Aligned_cols=166 Identities=13% Similarity=0.120 Sum_probs=137.8
Q ss_pred CchhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHH-HHHH-----HHHHHhHhh
Q 025282 46 TPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVL-SSAF-----MVGLLVASP 119 (255)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~-----~~~~~~~~~ 119 (255)
.+++.....++..++.++|+..++. +.|.+.+|++.++.+.+.. .+.. .++..++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~-----------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~ 74 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGF-----------------YATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAI 74 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHH
Confidence 3455677778899999999998876 3479999999887775543 3322 222347889
Q ss_pred HHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHH--------HHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHH
Q 025282 120 IFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFW--------MIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAW 191 (255)
Q Consensus 120 ~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~ 191 (255)
+.|+++||+|||+.++.+.++.+++.++++++++++ .+++.|+++|++.+...+....+++|++|+++|+++
T Consensus 75 ~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~ 154 (434)
T PRK15075 75 VLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFY 154 (434)
T ss_pred HHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHH
Confidence 999999999999999999999999999999999877 468899999999999999889999999999999999
Q ss_pred HHHHHhhhhhhhhhhhhhhhhh--------c-cchhHHHHHHHHHH
Q 025282 192 LGVFYMCLPSGYAIGYVYGGWV--------G-HYNWRYAFWGEAIL 228 (255)
Q Consensus 192 ~~~~~~~~~~g~~~g~~~~~~l--------~-~~~w~~~f~~~~~~ 228 (255)
+++.+....+|..+++.+++.+ . ..|||+.|++..+.
T Consensus 155 ~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~ 200 (434)
T PRK15075 155 TSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLI 200 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHH
Confidence 9999998888888888777765 2 57999999875443
No 44
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.85 E-value=5.4e-20 Score=157.59 Aligned_cols=136 Identities=10% Similarity=0.013 Sum_probs=128.8
Q ss_pred cccccccccCCcch-hHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 89 GTGIQGDFDLNNFQ-DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 89 ~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
.|++.+|+|++.++ .|.+.+++..++++.+++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|++
T Consensus 49 ~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGva 128 (511)
T TIGR00806 49 TPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVT 128 (511)
T ss_pred HHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHH
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGE 225 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~ 225 (255)
.|..+ ....++..++|+++|+++.++...+..+|.++++++++++...|||+-+...
T Consensus 129 EA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln 185 (511)
T TIGR00806 129 MAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLN 185 (511)
T ss_pred HHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHH
Confidence 99999 9999999999999999999999999999999999999994478999765543
No 45
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.85 E-value=5.5e-20 Score=161.43 Aligned_cols=152 Identities=16% Similarity=0.171 Sum_probs=135.4
Q ss_pred cccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHhh
Q 025282 89 GTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAI-CRMLVGVG 167 (255)
Q Consensus 89 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~~ 167 (255)
+|.+.+++|++.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++++.+++ .|++.|++
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~ 121 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLG 121 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 36899999999999999999999999999999999999999999999999999999999999999998875 56899999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhcc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p 241 (255)
.+...+....++.++++ ++|+++.++.+.+..+|..++|++++.+. ..|||+.|++.+++.++..+..+++.+
T Consensus 122 ~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 122 LAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred chhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 98877777788899996 88999999999999999999999999888 889999999999887766555544443
No 46
>PRK11043 putative transporter; Provisional
Probab=99.84 E-value=6.6e-20 Score=158.32 Aligned_cols=155 Identities=17% Similarity=0.276 Sum_probs=140.6
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 166 (255)
|.+|.+++++|.++++.++..+++.++..+++++.|+++||+|||+.+..+.++..++.+++.++++++.+++.|++.|+
T Consensus 27 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 106 (401)
T PRK11043 27 PAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAV 106 (401)
T ss_pred hhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 45578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhcc
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p 241 (255)
+.+...+...+++.|+++++++++..+.......+|..++|.+++++. ..+||+.|++.+++.++..+..++..|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 107 GVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKP 182 (401)
T ss_pred hhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 998888888899999999999999999998888999999999999988 889999999988887776665554433
No 47
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.84 E-value=8.8e-20 Score=158.15 Aligned_cols=177 Identities=15% Similarity=0.039 Sum_probs=144.4
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccc-cccCCcchhHHHHHHHHHHHHhHhhHHHhhhc
Q 025282 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQG-DFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (255)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 126 (255)
++.+....+...+.+.....++. +.+.+.+ ++|+|.+|.+++.+++.+++.+.+++.|++.|
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~-----------------l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~D 95 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSA-----------------VTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVP 95 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666666777766666654 3356655 89999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhh
Q 025282 127 SVNPFRLIGVGLTVWTLAVVGCGFS-----FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS 201 (255)
Q Consensus 127 r~G~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 201 (255)
|+|+|+++.++.++.++.+++.+++ ++++.+++.|++.|++ +..++.....+++++|+++||+++|+.....++
T Consensus 96 r~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~ 174 (462)
T PRK15034 96 IFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNL 174 (462)
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhh
Confidence 9999999999999999999999987 8999999999999998 778899999999999999999999999777777
Q ss_pred hhhhhhhhhhhhc-------------------cchhHHHHHHHHHHHHHHHHHHHHhccC
Q 025282 202 GYAIGYVYGGWVG-------------------HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (255)
Q Consensus 202 g~~~g~~~~~~l~-------------------~~~w~~~f~~~~~~~~~~~~~~~~~~p~ 242 (255)
|..+++++...+. ..+||..+++..++.++..++.+++.++
T Consensus 175 G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 175 GVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7765554443211 2348888888888877777776666544
No 48
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=3.9e-20 Score=161.13 Aligned_cols=152 Identities=16% Similarity=0.301 Sum_probs=141.3
Q ss_pred cccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhhhhh
Q 025282 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--SFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 93 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~g~ 170 (255)
+.+++++.++.+++.+.+..|+++++++.|++.||+|.|+++..+.++.++++++...+. +++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 568999999999999999999999999999999999999999999999999999999875 456779999999999999
Q ss_pred HhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c-chhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
.++....+.++|+|++||++..++...+..+|.+++-+++|++. . .||++.|++.++++++..++++++..++|
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P 220 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSP 220 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999998 5 89999999999999998888777644433
No 49
>PRK09952 shikimate transporter; Provisional
Probab=99.84 E-value=3.5e-20 Score=161.95 Aligned_cols=181 Identities=13% Similarity=0.106 Sum_probs=141.0
Q ss_pred CchhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcc-cccccc--cCCcchhHHHH-----HHHHHHHHhH
Q 025282 46 TPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGT-GIQGDF--DLNNFQDGVLS-----SAFMVGLLVA 117 (255)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~s~~~~~~~~-----~~~~~~~~~~ 117 (255)
++++......+..++.++|...++... | .+.+++ +.++. .+++. ++..++..++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~-----------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g 80 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITA-----------------ALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLG 80 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhH
Confidence 334566777788889999988776421 2 344454 56655 45553 3455667789
Q ss_pred hhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHH--------HHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchh
Q 025282 118 SPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFW--------MIAICRMLVGVGEASFISLAAPFIDDNAPVAKKT 189 (255)
Q Consensus 118 ~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~ 189 (255)
+++.|+++||+|||+++.++.+++++++++++++++++ .+++.|+++|++.|..++....++.|++|+++|+
T Consensus 81 ~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg 160 (438)
T PRK09952 81 GVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKA 160 (438)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999999999999999987 5888999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhc---------cchhHHHHHHHHHHHHHHHHHHHHhccCccc
Q 025282 190 AWLGVFYMCLPSGYAIGYVYGGWVG---------HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 190 ~~~~~~~~~~~~g~~~g~~~~~~l~---------~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
+..+..+.+..+|.+++..+...+. ..|||+.|++.+++.++. +......||+++
T Consensus 161 ~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~ 224 (438)
T PRK09952 161 FYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAE 224 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChh
Confidence 9999999999999888876665543 369999999887765432 222223456543
No 50
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.1e-20 Score=165.19 Aligned_cols=186 Identities=20% Similarity=0.303 Sum_probs=164.5
Q ss_pred CcCchhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHh
Q 025282 44 WFTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFAS 123 (255)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~ 123 (255)
++....++..++..++..+.++..++...+ -.+.+|.++...+.+.+.+++.+++++++++++.
T Consensus 40 ~K~dl~i~~~~~~~y~~~~~d~~si~~a~l----------------~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~ 103 (495)
T KOG2533|consen 40 RKLDLFILPFLCYLYFHAYLDKSSIVNASL----------------SGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGL 103 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhcchhHHH----------------cCCccccchhhhhhhhHHHHHHHHHHHHHhhHHH
Confidence 333344556667778888888877765322 3467889999999999999999999999999999
Q ss_pred hhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhh
Q 025282 124 LARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGY 203 (255)
Q Consensus 124 l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 203 (255)
+.||++..+.+....+++++..++....+|++.+++.|++.|+.++..+|....+++.|+.+++|++.++++..+.++|+
T Consensus 104 L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~ 183 (495)
T KOG2533|consen 104 LGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGN 183 (495)
T ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhh
Confidence 99999999999999999988888888899999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhh------c-cchhHHHHHHHHHHHHHHHHHHHHhccCccc
Q 025282 204 AIGYVYGGWV------G-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 204 ~~g~~~~~~l------~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
++|.+++..+ . ..||||.|++.++++++..++.+++.|+.|.
T Consensus 184 i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 184 IFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999885 3 6899999999999999999998888887765
No 51
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.84 E-value=5.5e-20 Score=158.65 Aligned_cols=143 Identities=15% Similarity=0.130 Sum_probs=127.1
Q ss_pred ccc-ccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh--------hhHHHHHH
Q 025282 89 GTG-IQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS--------FSFWMIAI 159 (255)
Q Consensus 89 ~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 159 (255)
+|. +++++|.+..+.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+.+.++ .+++.+++
T Consensus 38 l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 117 (399)
T PRK05122 38 LPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLL 117 (399)
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHH
Confidence 344 678999999999999999999999999999999999999999999999888876665543 25778899
Q ss_pred HHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHH
Q 025282 160 CRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFP 231 (255)
Q Consensus 160 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~ 231 (255)
.|++.|++.+...+....++.|+.|+++|++++++.+....+|.++|+.+++.+. ..||++.+++.+++.++
T Consensus 118 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~ 190 (399)
T PRK05122 118 GRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALL 190 (399)
T ss_pred HHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988 88999988877665443
No 52
>PRK12382 putative transporter; Provisional
Probab=99.84 E-value=2.1e-19 Score=154.77 Aligned_cols=142 Identities=15% Similarity=0.153 Sum_probs=124.0
Q ss_pred Ccc-cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH--------hhhHHHHH
Q 025282 88 PGT-GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF--------SFSFWMIA 158 (255)
Q Consensus 88 ~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 158 (255)
.+| ++++++|+|.++.|++.+++.++..+++++.|+++||+|||+++..+.+...++.+.+.. .++++.++
T Consensus 37 ~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (392)
T PRK12382 37 VIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLV 116 (392)
T ss_pred hhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHH
Confidence 345 467899999999999999999999999999999999999999999998877765543221 35889999
Q ss_pred HHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHH
Q 025282 159 ICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILM 229 (255)
Q Consensus 159 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~ 229 (255)
+.|+++|++.+...+...+++.|++|+|+|++++++.+.+...|..+||++++.+. ..|||+.+.+..+..
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 188 (392)
T PRK12382 117 VGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLP 188 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 99999999999988888999999999999999999999999999999999999888 789998776655443
No 53
>PRK10054 putative transporter; Provisional
Probab=99.84 E-value=1.4e-19 Score=156.17 Aligned_cols=153 Identities=16% Similarity=0.159 Sum_probs=137.2
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 169 (255)
+++++++|++..+.|+..+.+.++..+++++.|+++||+|||++++++.++.+++.++.++.++++.+++.|++.|.+.+
T Consensus 32 ~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 111 (395)
T PRK10054 32 IYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYS 111 (395)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhccC
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~~p~ 242 (255)
...+....+..|..|+++|++++++.+...++|..++|.+++++...+|+..|++.+++.++..++..++.|+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 112 VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQR 184 (395)
T ss_pred HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888899999999999999999999999999999999999998776689999998888776665555444443
No 54
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.84 E-value=4.1e-20 Score=161.55 Aligned_cols=179 Identities=15% Similarity=0.082 Sum_probs=146.9
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc
Q 025282 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS 127 (255)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 127 (255)
++.+....+.+...+.++..+.. ..|.+++ +|+++++.+++.+++.++..+++++.|+++||
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr 87 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFAL-----------------AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR 87 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHh-----------------hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc
Confidence 33444445555666665554432 2256765 59999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhh
Q 025282 128 VNPFRLIGVGLTVWTLAVVGCGFS----FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGY 203 (255)
Q Consensus 128 ~G~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 203 (255)
+|||+.+..+.++.+++.+++++. .+++.+.+.|++.|++.+..++.....+.|++|+++|++++++.+....+|.
T Consensus 88 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~ 167 (438)
T TIGR00712 88 SNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGG 167 (438)
T ss_pred cCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHh
Confidence 999999999999999998887764 4677888999999999999988889999999999999999999999999999
Q ss_pred hhhhhhhhhhc--cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 204 AIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 204 ~~g~~~~~~l~--~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
.+++.+.+... ..+||+.|++.+++.++..+..+++.||++
T Consensus 168 ~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 168 GIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 99988776544 579999999999888776666666656543
No 55
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=2.1e-19 Score=160.02 Aligned_cols=148 Identities=18% Similarity=0.297 Sum_probs=135.7
Q ss_pred hhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhh
Q 025282 102 QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDD 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~ 181 (255)
+.+|+.+++.++..+++++.|+++|++|||+.++++.+++.++.+++++++|+++++++|++.|+|.|....+.+.+++|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence 44899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccchhHHHHHHHhhhhhhhhhhhhhhhhhcc--chhHHHHHHHHHHHHHHHHHHHHhccCcccccccc
Q 025282 182 NAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGH--YNWRYAFWGEAILMFPFAVLGFVMKPLQLKGACFL 250 (255)
Q Consensus 182 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 250 (255)
..|++.||...+..+.+..+|..++..++....+ .+||..+.+..+.+++..+. +++.||+|++..++
T Consensus 170 iap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~ 239 (513)
T KOG0254|consen 170 IAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEK 239 (513)
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHc
Confidence 9999999999999999999999999666655543 48999999999998888888 77789999876553
No 56
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.83 E-value=3.2e-19 Score=154.56 Aligned_cols=151 Identities=19% Similarity=0.180 Sum_probs=135.5
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHH
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF---SFSFWMIAICRML 163 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 163 (255)
|.+|.+++++|++..+.|++.+.+.+++.+++++.|++.||+|||+.+.+++++++++.+++.. .++++.+++.|++
T Consensus 24 ~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l 103 (410)
T TIGR00885 24 PMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFI 103 (410)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 4558999999999999999999999999999999999999999999999999999999888654 3589999999999
Q ss_pred HHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c--------------------------c
Q 025282 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H--------------------------Y 216 (255)
Q Consensus 164 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~--------------------------~ 216 (255)
.|+|.|...+....++.+..|+++|++.+++.+...++|..++|.+++.+. . .
T Consensus 104 ~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (410)
T TIGR00885 104 LTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLA 183 (410)
T ss_pred HHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988764 1 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 025282 217 NWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 217 ~w~~~f~~~~~~~~~~~~~~~ 237 (255)
+||+.|++.+++.++..++..
T Consensus 184 ~w~~~fl~~a~~~~~~~~~~~ 204 (410)
T TIGR00885 184 SVQTPYMIIGAVVLAVALLIM 204 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 699999998887766554443
No 57
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.83 E-value=4.5e-19 Score=153.20 Aligned_cols=153 Identities=14% Similarity=0.205 Sum_probs=139.7
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 169 (255)
+++++++|++..+.|+..+...+...+.+++.|+++||+|||+++.++.++.+++.+++.+.++++.+++.|++.|++.+
T Consensus 35 ~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~ 114 (400)
T PRK11646 35 IRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGT 114 (400)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhccC
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~~p~ 242 (255)
...+...+++.|++|+++|++++++.+....+|..+||.+++++...+||+.|++.++..++..++..+..|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 115 LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 8889999999999999999999999999999999999999998887799999999888776665555455554
No 58
>PRK10133 L-fucose transporter; Provisional
Probab=99.83 E-value=5.6e-19 Score=154.27 Aligned_cols=125 Identities=21% Similarity=0.263 Sum_probs=115.5
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHHH
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGC---GFSFSFWMIAICRMLV 164 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~ 164 (255)
.+|.+++++|+++.+.++..+.+.+++.+++++.|++.||+|||+++..+..+++++.+++ .++++++.++++|+++
T Consensus 48 ~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~ 127 (438)
T PRK10133 48 LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFII 127 (438)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3479999999999999999999999999999999999999999999999999999999875 4678999999999999
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhh
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGW 212 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 212 (255)
|++.+...+....++.|+.++++|...+++.+..+.+|..+++.+++.
T Consensus 128 G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~ 175 (438)
T PRK10133 128 AAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQS 175 (438)
T ss_pred HHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998877777778999999999999999988764
No 59
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.82 E-value=4e-20 Score=167.66 Aligned_cols=152 Identities=19% Similarity=0.361 Sum_probs=135.9
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh---------------
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--------------- 152 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--------------- 152 (255)
+++.++++|+++..+.|++.+.+.++++++.++.++++||+|||+++.++.++++++.+++++.+
T Consensus 55 ~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~ 134 (633)
T TIGR00805 55 SLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSST 134 (633)
T ss_pred hchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccc
Confidence 45799999999999999999999999999999999999999999999999999999999988763
Q ss_pred ------------------------------------hHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHH
Q 025282 153 ------------------------------------SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFY 196 (255)
Q Consensus 153 ------------------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~ 196 (255)
.+..++++|+++|+|.+..++...+++.|++|+++|++++++++
T Consensus 135 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~ 214 (633)
T TIGR00805 135 GNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILE 214 (633)
T ss_pred ccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHH
Confidence 24567889999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhhhc-cc----------------------hhHHHHHHHHHHHHHHHHHHHHh
Q 025282 197 MCLPSGYAIGYVYGGWVG-HY----------------------NWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 197 ~~~~~g~~~g~~~~~~l~-~~----------------------~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
....+|..+|+++++++. .+ +|+..|++.+++.++.++..+++
T Consensus 215 ~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 215 SIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999876 21 37888999888877766654444
No 60
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.82 E-value=6.7e-19 Score=152.10 Aligned_cols=155 Identities=20% Similarity=0.235 Sum_probs=135.8
Q ss_pred CcccccccccCCcch-----hHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 025282 88 PGTGIQGDFDLNNFQ-----DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRM 162 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (255)
.+|.+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+.++.+.++.+++.+++.+.++++.+++.|+
T Consensus 36 ~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (408)
T PRK09874 36 FLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRA 115 (408)
T ss_pred hHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 447888889988654 488899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhcc
Q 025282 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (255)
Q Consensus 163 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p 241 (255)
+.|++.+ ..+....++.|.+|+++|+++.++......+|..++|.+++.+. ..+||+.|++.+++.++..+..+++.|
T Consensus 116 ~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (408)
T PRK09874 116 LLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIR 194 (408)
T ss_pred HHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999755 45777788999999999999999999999999999999999988 789999999998887776666655555
Q ss_pred Cc
Q 025282 242 LQ 243 (255)
Q Consensus 242 ~~ 243 (255)
+.
T Consensus 195 ~~ 196 (408)
T PRK09874 195 EN 196 (408)
T ss_pred cC
Confidence 43
No 61
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.81 E-value=4.7e-19 Score=156.47 Aligned_cols=139 Identities=16% Similarity=0.129 Sum_probs=126.2
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc-cCchHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSFSFWM-IAICRMLVGVG 167 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~~ 167 (255)
.++++++|++.++.+++.+.+.....+..++.|+++|| +|||++++++.++++++.++++++.+... ++++|+++|+|
T Consensus 39 ~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig 118 (489)
T PRK10207 39 VFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVG 118 (489)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhc
Confidence 47788999999999999999998888889999999999 99999999999999999999999876444 55789999999
Q ss_pred hhhHhhhhHhhhhhcCccc--chhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHH
Q 025282 168 EASFISLAAPFIDDNAPVA--KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAIL 228 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~ 228 (255)
.|...+...+++.|.+|++ +|+.++++++...++|..+||.+++++. +.|||+.|++.++.
T Consensus 119 ~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~ 182 (489)
T PRK10207 119 NGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAG 182 (489)
T ss_pred cccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHH
Confidence 9999999999999999877 4578999999999999999999999999 88999999987653
No 62
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.81 E-value=9.1e-19 Score=151.00 Aligned_cols=151 Identities=17% Similarity=0.160 Sum_probs=129.1
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 169 (255)
+.+.++++.+..+.+++.+.+.+++.+.+++.|+++||+|||++++++.++.+++.+++.+..+. ++.|+++|++.+
T Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a 103 (393)
T PRK11195 27 IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAA 103 (393)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 45678889898999999999999999999999999999999999999999999988887777664 678999999999
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
...|...+++.|++|+++|++++++.+....+|.++||.+++++....|+..+.+.+...++. .+..+..||.+
T Consensus 104 ~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 104 AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 999999999999999999999999999999999999999999998445777777666544333 23334456543
No 63
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.81 E-value=4.3e-19 Score=158.39 Aligned_cols=156 Identities=18% Similarity=0.228 Sum_probs=138.1
Q ss_pred cccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHh
Q 025282 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFI 172 (255)
Q Consensus 93 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~ 172 (255)
.+.+..+.....+..+++.+|..+|++++|+++||+|||+++++++++..++.++.++++|++.+++.|++.|++.+...
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 35667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhccCccccccccC
Q 025282 173 SLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQLKGACFLH 251 (255)
Q Consensus 173 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 251 (255)
.....++.|++++++|+.+..+ ..+...++.++++.++++.. +||+.+++..++.++..++ +++.||++++...+.
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g 265 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKG 265 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcC
Confidence 9999999999999999999999 77777777777777777654 9999999999988776666 555578888765443
No 64
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.81 E-value=1.7e-18 Score=147.77 Aligned_cols=155 Identities=11% Similarity=0.132 Sum_probs=131.9
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHH-HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGV-GLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 169 (255)
++++++|.+..+.|++.+.+.+...+.+++.|+++||+|||+.++. +..+.+++.++++++++++.+++.|++.|.+.+
T Consensus 23 ~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 102 (375)
T TIGR00899 23 FLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFAS 102 (375)
T ss_pred HHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhh
Confidence 4678999999999999999999999999999999999999887654 566666777888899999999999999998888
Q ss_pred hHhhhhHhhhhhcCcccchhHH--HHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCccc
Q 025282 170 SFISLAAPFIDDNAPVAKKTAW--LGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
...+...+++.|+.|+++|++. .+......++|.++||++++.+. ..+||+.|++.+++.++..++.+++.||.++
T Consensus 103 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 103 TANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred hhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 8888888889999887777654 57888888999999999999988 8899999999988877776666665676543
No 65
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.81 E-value=1.6e-18 Score=148.74 Aligned_cols=127 Identities=18% Similarity=0.252 Sum_probs=120.8
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
.+|.+.+++|.|..+.|++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.++++++++++.++++|++.|++
T Consensus 28 ~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 107 (381)
T PRK03633 28 LVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIG 107 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
.+...+.....+.+..++++|++++++++...++|..+||.+++.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 108 CAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99998888888888999999999999999999999999999999887
No 66
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.79 E-value=2.4e-18 Score=152.42 Aligned_cols=153 Identities=18% Similarity=0.119 Sum_probs=131.9
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
+++.+..|+|-+ +...|+.+.+.++..++.++.|+++|.||||+.++.+.++..+|.++++.++|...++++..+.|+|
T Consensus 66 ~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gvg 144 (599)
T PF06609_consen 66 ILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVG 144 (599)
T ss_pred HHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHh
Confidence 447888999965 5678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh-ccC
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM-KPL 242 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~-~p~ 242 (255)
.|.... ....++|..|.|.|+.+.++...........++.++..+. +.+|||.|++..++..+.+++.+++ .|+
T Consensus 145 aG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 145 AGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred hHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 877764 4666899999999999888888777676677888888777 8899999999998877666554443 443
No 67
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.79 E-value=1.2e-18 Score=144.26 Aligned_cols=148 Identities=22% Similarity=0.258 Sum_probs=139.0
Q ss_pred ccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhh
Q 025282 94 GDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFIS 173 (255)
Q Consensus 94 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~ 173 (255)
++.+-+.++.|++.+...+...+..++.|.+.||+|+|..+++|++.+.+.++++++.+++++++++|.++|+|.+...+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 34556788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhhhhcCccc-chhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhcc
Q 025282 174 LAAPFIDDNAPVA-KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (255)
Q Consensus 174 ~~~~~~~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p 241 (255)
...++++|.+|.+ +|++++|+...+.++|..+||+.||.+. ..|.+..|++.++++++-..+.++..+
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 9999999999987 5899999999999999999999999999 899999999999999888888777654
No 68
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.79 E-value=4.4e-18 Score=144.63 Aligned_cols=144 Identities=19% Similarity=0.204 Sum_probs=129.1
Q ss_pred CCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 025282 86 CTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVG 165 (255)
Q Consensus 86 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 165 (255)
.|.+|.+++++|++.++.+++.+++.++..+++++.|++.||+|||+.+.++.++.+++.+.+ ..++++.+++.|++.|
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g 98 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIG 98 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999888888877 7788999999999999
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cc--hhHHHHHHHHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY--NWRYAFWGEAILMFP 231 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~--~w~~~f~~~~~~~~~ 231 (255)
++.+...+....++.|+++ ++|++++++.+....+|..+++.+++.+. .. +||+.|.+.+++.++
T Consensus 99 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 99 VGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 9999988888889999986 68999999999999999999999988876 33 499998877665443
No 69
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.79 E-value=4.8e-18 Score=149.82 Aligned_cols=145 Identities=14% Similarity=0.108 Sum_probs=131.6
Q ss_pred ccccc--ccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc-cCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 91 GIQGD--FDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 91 ~~~~~--~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
++.++ +|++..+.+++.+.+.++..+++++.|+++|| +|||+++.++.++.+++.++.+++++++.+++++++.|++
T Consensus 36 yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g 115 (475)
T TIGR00924 36 YLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVG 115 (475)
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhc
Confidence 55565 89999999999999999999999999999999 8999999999999999999999998999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccc---hhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHH
Q 025282 168 EASFISLAAPFIDDNAPVAK---KTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVL 235 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~ 235 (255)
.|...+...++++|++|+++ |+++.++++...++|.++||++++++. +.||++.|.+.++..++..+.
T Consensus 116 ~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 116 SGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred cccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 99999999999999998754 888999999999999999999999998 789999999988655544333
No 70
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.78 E-value=3e-18 Score=144.22 Aligned_cols=150 Identities=27% Similarity=0.445 Sum_probs=139.5
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
..|.+.+++|.+..+.++..+...++..+++++.|+++||+|||+.+..+.++..++.++..+.++++.+++.|++.|++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 100 (352)
T cd06174 21 ALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLG 100 (352)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcc
Confidence 44688888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHH
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
.+...+...+++.|++|+|+|++.+++.+....+|..++|.+++.+. ..+||+.|++.+++.++..+...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
T cd06174 101 GGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLL 171 (352)
T ss_pred cccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988 77899999998887766655543
No 71
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.78 E-value=9.8e-18 Score=144.97 Aligned_cols=150 Identities=13% Similarity=0.248 Sum_probs=124.1
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHH---Hh-hhHHHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG---FS-FSFWMIAICRMLVG 165 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~l~G 165 (255)
+.+.+++|.++++.++..+.+.++..+++++.|++.||+|||+++..+.++.+++.+++. +. .+++.+++.|++.|
T Consensus 37 ~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G 116 (402)
T TIGR00897 37 SPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRG 116 (402)
T ss_pred HHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHH
Confidence 455688999999999999999999999999999999999999999999999988876553 32 57888899999999
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhh-hhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGY-AIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
++.+...+.....+.+++|+++|++++|+.+...++|. .++|.+++++. ..||+..++.......+..++.+++
T Consensus 117 ~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 192 (402)
T TIGR00897 117 LGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFS 192 (402)
T ss_pred cchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhc
Confidence 99988888888889999999999999999999999997 58999988887 7787666555444333333333333
No 72
>PTZ00207 hypothetical protein; Provisional
Probab=99.77 E-value=2.8e-17 Score=146.39 Aligned_cols=148 Identities=14% Similarity=0.130 Sum_probs=127.5
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS------FSFWMIAICRML 163 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l 163 (255)
+.+++++|++..+.+++.++. ......+++.|++.||+|||++++++.+++++++++++++ .+++.+++.|++
T Consensus 51 ~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l 129 (591)
T PTZ00207 51 GAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGL 129 (591)
T ss_pred HHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHH
Confidence 689999999999999998773 4455678889999999999999999999999999999997 689999999999
Q ss_pred HHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhh-hhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhc
Q 025282 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI-GYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMK 240 (255)
Q Consensus 164 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~~ 240 (255)
.|++.+...+.....+.+++| ++||++.|+...+.++|.++ +++..+++ ..+|+..|++.+++.++..++.+.+.
T Consensus 130 ~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~-~~~~~~~fl~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 130 MTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF-SDNTSAYFFFLMSFALVVGILAIVFM 205 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhe
Confidence 999999999999999999997 88999999999999999976 44444444 35788889888888877777666653
No 73
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.77 E-value=5.9e-18 Score=141.58 Aligned_cols=177 Identities=16% Similarity=0.185 Sum_probs=149.3
Q ss_pred hHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhccc
Q 025282 49 RLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV 128 (255)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 128 (255)
+.+.+.......++.....++.. .+.+++++++|+.|.+++.++..+...+..++.|.+.||+
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l-----------------~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf 76 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPL-----------------GVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF 76 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------------HhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc
Confidence 34444444555555555555542 2588899999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhh
Q 025282 129 NPFRLIGVGLTVWTLAVVGCGFSFS---FWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI 205 (255)
Q Consensus 129 G~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 205 (255)
|.|++.+++.++..+-++..+++.+ ++++++.+.+.|++ |..++..+..+++++|++++|.++|++. ..++|..+
T Consensus 77 GgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av 154 (417)
T COG2223 77 GGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAV 154 (417)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHH
Confidence 9999999999999999999998854 55999999999997 5566889999999999999999999999 89999999
Q ss_pred hhhhhhhhc-cch---hHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 206 GYVYGGWVG-HYN---WRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 206 g~~~~~~l~-~~~---w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
...++..+. ..+ |+....+..+..++..+..++...+.+
T Consensus 155 ~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p 197 (417)
T COG2223 155 AQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVP 197 (417)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCh
Confidence 998888888 667 999999998888887887777754443
No 74
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.75 E-value=2.2e-17 Score=143.41 Aligned_cols=153 Identities=12% Similarity=-0.015 Sum_probs=132.0
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF-----SFSFWMIAICRMLV 164 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~ 164 (255)
|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..+. .++++.+++.|++.
T Consensus 41 ~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 120 (417)
T PRK10489 41 PVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWD 120 (417)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 6777888889999999999999999999999999999999999999888887777665442 46788999999999
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
|++.+...+...+++.|+.|+++|+++.++.+....+|..+||.+++.+. ..+|++.|++.++..++..+..+ ..|+.
T Consensus 121 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 199 (417)
T PRK10489 121 GFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL-RLPAL 199 (417)
T ss_pred HHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hCCCC
Confidence 99999888888999999999999999999999999999999999999988 78999999888776665554443 33543
No 75
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.74 E-value=2.6e-17 Score=145.08 Aligned_cols=152 Identities=18% Similarity=0.209 Sum_probs=141.4
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHHHHhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAIC-RMLVGVGE 168 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~~~ 168 (255)
+.++++++-+..+.+|+.++......+.+++.+.+.||+|.|.+.+.|.++.+++.++.++++++|++++. -++.|+|.
T Consensus 70 ~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~ 149 (509)
T KOG2504|consen 70 EELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGL 149 (509)
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999988876 58889999
Q ss_pred hhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccC
Q 025282 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~ 242 (255)
|+.+.....++..+|+ |+|+.++|+...+.++|.++-|.+..++. .+|||+.+++.+.+.+-..+.....+|.
T Consensus 150 ~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~ 223 (509)
T KOG2504|consen 150 GLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPL 223 (509)
T ss_pred hhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999987 88999999999999999999999999888 9999999999999887777777777773
No 76
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.74 E-value=2.2e-16 Score=136.13 Aligned_cols=154 Identities=8% Similarity=0.108 Sum_probs=119.7
Q ss_pred ccccccccCCcchhHHHHHHHHH-HHHhHhhHHHhhhcccCchHHH-HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMV-GLLVASPIFASLARSVNPFRLI-GVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
+++++++|+++++.|++.+...+ +..+++++.++ .||+|||+.+ ..+.+..+++..+.+++++++.+++.+.+.|..
T Consensus 40 ~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 118 (393)
T PRK15011 40 IFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSF 118 (393)
T ss_pred HHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 35788999999999999876555 55566655666 9999999875 455666667777888899999887766665555
Q ss_pred hhhHhhhhHhhhhhcCcccch--hHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 168 EASFISLAAPFIDDNAPVAKK--TAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
.+...+....++.|+.+++.| +...++.+...++|.++||++++++. +.|||..|++.++..++..+..+++.||.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 119 GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 567778888888888776655 34557888899999999999999998 889999999998887777766666666553
No 77
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.74 E-value=2.8e-17 Score=120.33 Aligned_cols=136 Identities=25% Similarity=0.354 Sum_probs=122.5
Q ss_pred HHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCccc
Q 025282 107 SSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVA 186 (255)
Q Consensus 107 ~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~ 186 (255)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+.....++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34566788899999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred chhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccC
Q 025282 187 KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (255)
Q Consensus 187 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~ 242 (255)
+|++..++.+....+|..++|.+.+.+. ..+|++.|++.+.+.++..+..+++.||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999988 7899999999888877776666665554
No 78
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.74 E-value=1.2e-16 Score=141.85 Aligned_cols=144 Identities=15% Similarity=0.193 Sum_probs=123.9
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc-cCchHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVGVG 167 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~ 167 (255)
.++++++|++..+.+++.+.+........++.|+++|| +|||+.+.++.++.+++.+++++++ +.+.+++.+++.|++
T Consensus 46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig 125 (500)
T PRK09584 46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVG 125 (500)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 47778999999998888888776666667899999999 5999999999999999999998874 566777889999999
Q ss_pred hhhHhhhhHhhhhhcCcccc--hhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHH
Q 025282 168 EASFISLAAPFIDDNAPVAK--KTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFA 233 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~ 233 (255)
.|...+...+++.|++|+++ |..++++++.+.++|..+||.+++++. ..|||+.|.+.++..++..
T Consensus 126 ~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 126 NGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred hhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 99999999999999998643 456888999999999999999999998 8899999999876544443
No 79
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.74 E-value=1.6e-16 Score=138.08 Aligned_cols=154 Identities=15% Similarity=0.221 Sum_probs=131.6
Q ss_pred chhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHHHhhhhhHhhhhH
Q 025282 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF----SFWMIAICRMLVGVGEASFISLAA 176 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~G~~~g~~~~~~~ 176 (255)
...+...++..++.+++.++.|++.||+|+|+++.++.++.+++..+..... +++.+++.+++.|++.+...+...
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~ 330 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGS 330 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5668999999999999999999999999999999999999988877666632 346677889999999999889989
Q ss_pred hhhhhcCcccchhHHHHHHH-hhhhhhhhhhhhhhhhhc-c------chhHHHHHHHHHHHHHHHHHHHHhccCcccccc
Q 025282 177 PFIDDNAPVAKKTAWLGVFY-MCLPSGYAIGYVYGGWVG-H------YNWRYAFWGEAILMFPFAVLGFVMKPLQLKGAC 248 (255)
Q Consensus 177 ~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~-~------~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 248 (255)
.++.|.+|+++|++++++.+ ....+|..+||+++|++. . .||+..|.+.+++.++..++.+++.+|+.+..+
T Consensus 331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~~ 410 (418)
T TIGR00889 331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAIK 410 (418)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 99999999999999999997 678899999999999887 4 479999999999888888888777777765555
Q ss_pred ccCCCC
Q 025282 249 FLHSDF 254 (255)
Q Consensus 249 ~~~~~~ 254 (255)
.++||.
T Consensus 411 ~~~~~~ 416 (418)
T TIGR00889 411 VDDRDV 416 (418)
T ss_pred Cccccc
Confidence 555553
No 80
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.72 E-value=4.8e-17 Score=134.19 Aligned_cols=117 Identities=19% Similarity=0.302 Sum_probs=109.1
Q ss_pred cCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhH
Q 025282 97 DLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAA 176 (255)
Q Consensus 97 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~ 176 (255)
+.+..-.|.+.+.+.++.++.++.+|.++||+|||.++.++++..++...+.++++|+..++.+|++.|+..|.. .+..
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~r 142 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIR 142 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHH
Confidence 345556799999999999999999999999999999999999999999999999999977778899999988876 5679
Q ss_pred hhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 177 PFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 177 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
++++|.+++|+|+.+++..+..+++|.++||.+|+++.
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla 180 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLA 180 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHH
Confidence 99999999999999999999999999999999999987
No 81
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.72 E-value=1.6e-16 Score=135.12 Aligned_cols=155 Identities=10% Similarity=0.037 Sum_probs=127.5
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhccc-----CchHH-HHHHHHHHHHHHHHHHHh---hhHHHH
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV-----NPFRL-IGVGLTVWTLAVVGCGFS---FSFWMI 157 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----G~r~~-~~~~~~~~~~~~~~~~~~---~~~~~~ 157 (255)
+++|.+.+|+|+|.++.++.... .+...+ .+++|++.||+ ||||. ++.+.++.++.....++. .+.+.+
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l 86 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLL 86 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHH
Confidence 46689999999999999999755 444444 99999999998 89887 456777777777777776 466677
Q ss_pred HHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cch--------hHHHHHHHHHH
Q 025282 158 AICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN--------WRYAFWGEAIL 228 (255)
Q Consensus 158 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~--------w~~~f~~~~~~ 228 (255)
.+..++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.+++.+. ..+ ||..|++.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~ 166 (356)
T TIGR00901 87 AGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALL 166 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHH
Confidence 777888888888888999999999999999999999999999999999999998887 667 99999999887
Q ss_pred HHHHHHHHHHhccCc
Q 025282 229 MFPFAVLGFVMKPLQ 243 (255)
Q Consensus 229 ~~~~~~~~~~~~p~~ 243 (255)
.++..+..++..||+
T Consensus 167 ~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 167 ILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHhccCC
Confidence 766555544445553
No 82
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.72 E-value=2.9e-16 Score=137.60 Aligned_cols=145 Identities=17% Similarity=0.160 Sum_probs=121.3
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhccc-CchHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV-NPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVGVGE 168 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~ 168 (255)
++.+++|++..+.+.+.+.+.....++.++.|+++||+ |||+.+.++.++..++.++++... +...+++...+.+++.
T Consensus 35 yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~ 114 (493)
T PRK15462 35 YLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGY 114 (493)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhc
Confidence 56778999999999999999999999999999999999 999999999999999987776543 2233444555556677
Q ss_pred hhHhhhhHhhhhhcCccc--chhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHH
Q 025282 169 ASFISLAAPFIDDNAPVA--KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVL 235 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~ 235 (255)
|...+...++++|.+|++ +|..++++.+...++|..++|.+.+++. ..||++.|.+.++..++..+.
T Consensus 115 G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 115 GLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred ccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHH
Confidence 777788889999999976 7999999999999999999999999998 889999999877654443333
No 83
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.70 E-value=1.9e-16 Score=135.47 Aligned_cols=153 Identities=14% Similarity=0.155 Sum_probs=119.4
Q ss_pred ccccccc--CCcchhHHHHHH-----HHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHH--------
Q 025282 91 GIQGDFD--LNNFQDGVLSSA-----FMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFW-------- 155 (255)
Q Consensus 91 ~~~~~~~--~s~~~~~~~~~~-----~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~-------- 155 (255)
.+.+++. .++++.+...+. ..++..+++++.|+++||+|||+++..+.++.+++.++++++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (394)
T TIGR00883 18 LVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPI 97 (394)
T ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHH
Confidence 4444432 445555555443 3333457889999999999999999999999999999999988865
Q ss_pred HHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc---------cchhHHHHHHHH
Q 025282 156 MIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG---------HYNWRYAFWGEA 226 (255)
Q Consensus 156 ~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---------~~~w~~~f~~~~ 226 (255)
.+++.|+++|++.+...+....++.|++|+++|++..++.+.+..+|.++++.++..+. ..+||+.|.+.+
T Consensus 98 ~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 177 (394)
T TIGR00883 98 LLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSA 177 (394)
T ss_pred HHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999988766542 468999998877
Q ss_pred HHHHHHHHHHHHhccCcc
Q 025282 227 ILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 227 ~~~~~~~~~~~~~~p~~~ 244 (255)
++.++..++. ...||++
T Consensus 178 ~~~~~~~~~~-~~~~~~~ 194 (394)
T TIGR00883 178 VLVLIGLYLR-RNLEETP 194 (394)
T ss_pred HHHHHHHHHH-HhcCCCh
Confidence 6655443332 2334443
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.68 E-value=1.3e-15 Score=147.63 Aligned_cols=142 Identities=11% Similarity=0.018 Sum_probs=114.1
Q ss_pred chhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHH---HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHh
Q 025282 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGV---GLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAP 177 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~ 177 (255)
...++..+++.+.+++.++++|+++||+|||+++.. ..++.++..+.....++++.++++|+++|++.+...+...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 457888889999999999999999999999997533 22222333333334589999999999999999999999999
Q ss_pred hhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 178 FIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 178 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
++.+++++++|++++++.++...+|.++||++++++. ..+|++.|.+.+++.++..+ ..+..|+.
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 197 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWL-ASLFIPKT 197 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-HHhhCCCC
Confidence 9999999999999999999999999999999999998 88999998554444444333 33333443
No 85
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.68 E-value=1.5e-15 Score=147.20 Aligned_cols=154 Identities=11% Similarity=0.026 Sum_probs=120.8
Q ss_pred cccccccCCc--chhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHHH
Q 025282 91 GIQGDFDLNN--FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG---FSFSFWMIAICRMLVG 165 (255)
Q Consensus 91 ~~~~~~~~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~G 165 (255)
.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++.+++.++.. ..++++.+++.|++.|
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 114 (1146)
T PRK08633 35 TLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLG 114 (1146)
T ss_pred HHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 4555566543 3468899999999999999999999999999999998877665555433 4578999999999999
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c--------c-hhHHHHHHHHHHHHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H--------Y-NWRYAFWGEAILMFPFAVL 235 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~--------~-~w~~~f~~~~~~~~~~~~~ 235 (255)
++.+...+...+++.|++|+++|++++++.+.+..+|.++|+++++++. . . +|++.+.+..+...+..++
T Consensus 115 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1146)
T PRK08633 115 AQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLI 194 (1146)
T ss_pred HHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999887 4 2 3444444444333333333
Q ss_pred HHHhccCcc
Q 025282 236 GFVMKPLQL 244 (255)
Q Consensus 236 ~~~~~p~~~ 244 (255)
..+..|+.+
T Consensus 195 ~~~~~~~~~ 203 (1146)
T PRK08633 195 FAYRLPKVP 203 (1146)
T ss_pred HHhcCcCCC
Confidence 333345543
No 86
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.67 E-value=5.5e-15 Score=123.27 Aligned_cols=154 Identities=18% Similarity=0.165 Sum_probs=139.7
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHH
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG---FSFSFWMIAICRML 163 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l 163 (255)
+.+|.+++.|+++..+++++...+..++.+.+++.|++.+|+|+|+.++.|+.++++++.++. ...++..++++-++
T Consensus 34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFi 113 (422)
T COG0738 34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFI 113 (422)
T ss_pred hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Confidence 355899999999999999999999999999999999999999999999999999999999885 55689999999999
Q ss_pred HHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c-------------------chhHHHHH
Q 025282 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-------------------YNWRYAFW 223 (255)
Q Consensus 164 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-------------------~~w~~~f~ 223 (255)
.|.|.+...+...+++..+.++++..+-+++.+.++++|..++|++++.+. . ..|++.|.
T Consensus 114 la~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl 193 (422)
T COG0738 114 LASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYL 193 (422)
T ss_pred HHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHH
Confidence 999999999999999999999999999999999999999999999998775 2 13888999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 025282 224 GEAILMFPFAVLGFVMK 240 (255)
Q Consensus 224 ~~~~~~~~~~~~~~~~~ 240 (255)
..+...++..+.....+
T Consensus 194 ~~~~~lvll~v~~~~~k 210 (422)
T COG0738 194 ILAGLLVLLAVLILLSK 210 (422)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 88888777777666554
No 87
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.67 E-value=6.6e-15 Score=126.98 Aligned_cols=148 Identities=14% Similarity=0.116 Sum_probs=124.1
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
++++++|++..+.+++.+...++..++.++.|+++||+|||+.+..+.+...+........++++.+++.+++.+++.+.
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGI 321 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 56678899999999988888888888999999999999999988877766666555555667888888889999888888
Q ss_pred HhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
..+....+..|.+| ++|+++.++++....+|..++|.+++.+. ..||+..|++.+++.++..+..++.
T Consensus 322 ~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 322 LGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 77777888899998 56999999999999999999999999988 7899999998887777666555543
No 88
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.66 E-value=7.7e-17 Score=135.88 Aligned_cols=181 Identities=16% Similarity=0.178 Sum_probs=138.7
Q ss_pred hhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCccccccc-cc-------CCcchhHHHHHHHHHHHHhHhh
Q 025282 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGD-FD-------LNNFQDGVLSSAFMVGLLVASP 119 (255)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~s~~~~~~~~~~~~~~~~~~~~ 119 (255)
.+.+.+..++++...+|...++. +.|.+... ++ .++...+.+..+..+|.++||+
T Consensus 40 fk~i~iAG~GfftDsYDlF~I~l-----------------Vt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl 102 (538)
T KOG0252|consen 40 FKAIIIAGMGFFTDSYDLFSISL-----------------VTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQL 102 (538)
T ss_pred HHHHHHhhhhhcccchhhhhHHH-----------------HHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHH
Confidence 34455566777777777666543 22333322 22 4556678999999999999999
Q ss_pred HHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHH
Q 025282 120 IFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-------SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWL 192 (255)
Q Consensus 120 ~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~ 192 (255)
++|+++||+|||+++...++++.+++++++++. -..++.+.|++.|+|.|+.+|+..+..+|....++||...
T Consensus 103 ~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~i 182 (538)
T KOG0252|consen 103 FFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFI 182 (538)
T ss_pred HHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcccccee
Confidence 999999999999999999999999999887753 2678899999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhhhhhhhhc----------------cchhHHHHHHHHHHHHHHHHHHHHh-ccCccccc
Q 025282 193 GVFYMCLPSGYAIGYVYGGWVG----------------HYNWRYAFWGEAILMFPFAVLGFVM-KPLQLKGA 247 (255)
Q Consensus 193 ~~~~~~~~~g~~~g~~~~~~l~----------------~~~w~~~f~~~~~~~~~~~~~~~~~-~p~~~~~~ 247 (255)
+....+.+.|...|.+++-.+. ..-||..|.+.+++.+... .+++ +||+.+..
T Consensus 183 aavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l--y~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 183 AAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL--YFRLKMPETARYT 252 (538)
T ss_pred EEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH--HhhhcCCcchhHH
Confidence 9888888888877776665442 1249998888777665433 3333 57766543
No 89
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.66 E-value=4.2e-15 Score=131.71 Aligned_cols=153 Identities=14% Similarity=0.155 Sum_probs=126.0
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhccc-----CchHH-HHHHHHHHHHHHHHHHHh---hhHHHHH
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV-----NPFRL-IGVGLTVWTLAVVGCGFS---FSFWMIA 158 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----G~r~~-~~~~~~~~~~~~~~~~~~---~~~~~~~ 158 (255)
.+|.+.++.|.+.++.+.+ +.....+ ++++++|+++||+ |||+. +.++.+..+++...+++. ++++.+.
T Consensus 34 ~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~ 111 (491)
T PRK11010 34 TLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLA 111 (491)
T ss_pred HHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHH
Confidence 3467788889999888886 3333443 6899999999999 99885 667777777777777665 4788899
Q ss_pred HHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c-chhHHHHHHHHHHHHHHHHHH
Q 025282 159 ICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAVLG 236 (255)
Q Consensus 159 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-~~w~~~f~~~~~~~~~~~~~~ 236 (255)
+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.++. . .|||..|++.+++.++..+..
T Consensus 112 ~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~ 191 (491)
T PRK11010 112 ALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIAT 191 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988887 3 599999999988776665554
Q ss_pred HHhccCc
Q 025282 237 FVMKPLQ 243 (255)
Q Consensus 237 ~~~~p~~ 243 (255)
++ .||.
T Consensus 192 ~~-~~e~ 197 (491)
T PRK11010 192 LL-APEP 197 (491)
T ss_pred Hh-cCCC
Confidence 44 4554
No 90
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.66 E-value=2.1e-15 Score=129.62 Aligned_cols=140 Identities=11% Similarity=0.017 Sum_probs=114.7
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHH-HHHHHH-HHHHHhhhHHHHHHHHHHH
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLT-VWTLAV-VGCGFSFSFWMIAICRMLV 164 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~ 164 (255)
|.+|.+.+++|.|..+.|++.+++.++..++++++|+++||+|||......+. ...+.. ..+..+++++.+++.|++.
T Consensus 25 p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~ 104 (382)
T TIGR00902 25 PFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLF 104 (382)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 45578889999999999999999999999999999999999998543322211 111121 2344678999999999999
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHH
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAIL 228 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~ 228 (255)
|.+.+...+...++..++ .++|++.+|......++|.+++|++++++. ..|||..|.+.+..
T Consensus 105 ~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 105 ALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 999888888888887765 478899999999999999999999999998 88999999887655
No 91
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.65 E-value=7.7e-19 Score=153.89 Aligned_cols=150 Identities=21% Similarity=0.323 Sum_probs=133.1
Q ss_pred cchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHhhhhhHhhhhH
Q 025282 100 NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF---SFWMIAICRMLVGVGEASFISLAA 176 (255)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~~g~~~~~~~ 176 (255)
..+.++..+...++..+|+++.|+++||+|||+.+.++.++..++.++.++++ +++.+.++|++.|++.|...+...
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34678999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c---chhHHHHHHHHHHHHHHHHHHHHhccCcccccccc
Q 025282 177 PFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H---YNWRYAFWGEAILMFPFAVLGFVMKPLQLKGACFL 250 (255)
Q Consensus 177 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~---~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 250 (255)
.++.|..|+++|++..++.+..+.+|..++..++..+. . .+||+.+.+.+++.++..+.. ++.||+|++...+
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~ 201 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSK 201 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccceeccc
Confidence 99999999999999999999999999998887776554 2 459999999888876655444 5569998876443
No 92
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.65 E-value=7e-15 Score=126.90 Aligned_cols=147 Identities=19% Similarity=0.191 Sum_probs=126.1
Q ss_pred ccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhh
Q 025282 94 GDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFIS 173 (255)
Q Consensus 94 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~ 173 (255)
.+.+. ++.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++.|++.+..++
T Consensus 244 ~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 321 (399)
T PRK05122 244 AARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFP 321 (399)
T ss_pred HHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHH
Confidence 34454 3456677888889999999999999999999999999888888888888888888888899999999999888
Q ss_pred hhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccC
Q 025282 174 LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (255)
Q Consensus 174 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~ 242 (255)
.....+.|..|+++|+++.++++....+|..+++++.+.+. ..||++.|++.+++.++..+..+++.++
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 322 ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 88888889999999999999999999999999999999888 7899999999888877776666555443
No 93
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.65 E-value=3.7e-15 Score=129.25 Aligned_cols=145 Identities=21% Similarity=0.194 Sum_probs=125.1
Q ss_pred hHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHhhhhhHhhhhHhhh
Q 025282 103 DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS---FSFWMIAICRMLVGVGEASFISLAAPFI 179 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~ 179 (255)
.+.+.+++.+|.++|+++.++++||+|||..+.++.++..++.++..++ +++.+++++|++.|+..|........++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3666889999999999999999999999999999988888877776654 6899999999999999999999999999
Q ss_pred hhcCcccchhHHHHHHHhhhhhhhhhhhhhhh--hhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcccccc
Q 025282 180 DDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGG--WVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKGAC 248 (255)
Q Consensus 180 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~--~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 248 (255)
.|..|.+.||..-.+.+.+..+|.+++..++. .+. ...|++.+.+..+++++..+.. .+.||+||+.-
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l-~~~PESPk~Ll 212 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALL-PFLPESPKYLL 212 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHH-hcCCCCcchHH
Confidence 99999999999999999999999999966654 333 6779999999988877666555 44599998753
No 94
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.65 E-value=3.7e-15 Score=136.49 Aligned_cols=141 Identities=11% Similarity=-0.007 Sum_probs=122.0
Q ss_pred hHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhc
Q 025282 103 DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDN 182 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~ 182 (255)
..+...+..++.+++.++.|+++||+|||++++++.++.+++.++.++.++...+++.+++.|++.+..++....+++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677889999999999999999999999999999999999999998888888889999998888899999999999
Q ss_pred CcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 183 APVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 183 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
+|+++|++++|+.++...+|.++||++++.+...+...+|++.+++.++.+++.++ .||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~-LPET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALK-LPDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-CCCCc
Confidence 99999999999999999999999999999876445667888887777666655554 47654
No 95
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.65 E-value=6.1e-15 Score=127.55 Aligned_cols=153 Identities=15% Similarity=0.087 Sum_probs=127.6
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhccc-----CchH-HHHHHHHHHHHHHHHHHHh---hhHHHHH
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV-----NPFR-LIGVGLTVWTLAVVGCGFS---FSFWMIA 158 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----G~r~-~~~~~~~~~~~~~~~~~~~---~~~~~~~ 158 (255)
++|.+.++.|++.++.|++..+... .+.++++|+++||+ |||| .+.++.++.+++..+..+. .+++.++
T Consensus 21 ~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~ 98 (402)
T PRK11902 21 TLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLA 98 (402)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHH
Confidence 4578888889999999999777665 69999999999999 8765 6888888888887777776 3577788
Q ss_pred HHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c-chhHHHHHHHHHHHHHHHHHH
Q 025282 159 ICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAVLG 236 (255)
Q Consensus 159 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-~~w~~~f~~~~~~~~~~~~~~ 236 (255)
+..++.+++.+...+...+++.|++|+++|+++.++...+..+|..+++.++..+. . .|||..|++.+++.++..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~ 178 (402)
T PRK11902 99 GLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT 178 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999999999999999999999888887 4 599999999888776554443
Q ss_pred HHhccCc
Q 025282 237 FVMKPLQ 243 (255)
Q Consensus 237 ~~~~p~~ 243 (255)
+..||+
T Consensus 179 -~~~~e~ 184 (402)
T PRK11902 179 -LWAPEP 184 (402)
T ss_pred -HhcCCC
Confidence 344544
No 96
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.65 E-value=1e-15 Score=133.03 Aligned_cols=147 Identities=12% Similarity=0.059 Sum_probs=127.5
Q ss_pred ccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhh
Q 025282 96 FDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLA 175 (255)
Q Consensus 96 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~ 175 (255)
.+.+..+.+++.++..++..++.++.|++.||+|+|+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+..
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566778999999999999999999999999999999999999999998999999999999999999999988888888
Q ss_pred HhhhhhcCcccchhHHHHH-HHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccC
Q 025282 176 APFIDDNAPVAKKTAWLGV-FYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (255)
Q Consensus 176 ~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~ 242 (255)
..++.|.+|++.|++..+. ++....+|.+++|.+.|++. ..||+..|.+.+++.++..++.++..++
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8999999999999887665 67778899999999999998 7899999999888877666555555433
No 97
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.64 E-value=5.8e-15 Score=127.39 Aligned_cols=151 Identities=12% Similarity=0.088 Sum_probs=117.4
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHH---Hh-----hhHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG---FS-----FSFWMIAICRM 162 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~ 162 (255)
++.+++|.++.+.+++.+++.++..+++++.|+++||+|||+.++.+....++...... +. +.+..+++.++
T Consensus 28 ~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (396)
T TIGR00882 28 WLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGL 107 (396)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 55678999999999999999999999999999999999999999887766655443321 11 12334566788
Q ss_pred HHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhccC
Q 025282 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (255)
Q Consensus 163 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~~p~ 242 (255)
+.|++.+...+....+..|.. ++++...+......++|.++||++++.+...+||..|++.+++.++..++.+...|+
T Consensus 108 ~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (396)
T TIGR00882 108 YLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMFAKPK 185 (396)
T ss_pred HHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888888887787777777653 334567778888889999999999998776799999999988887776666555454
Q ss_pred c
Q 025282 243 Q 243 (255)
Q Consensus 243 ~ 243 (255)
.
T Consensus 186 ~ 186 (396)
T TIGR00882 186 A 186 (396)
T ss_pred C
Confidence 3
No 98
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.64 E-value=1.6e-14 Score=123.25 Aligned_cols=147 Identities=12% Similarity=0.157 Sum_probs=125.4
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
++.+++|.++.+.+++.+.......++.++.|++.||+|||+.+.++.++..+......+.++.+.+++.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55678899999999988888777888899999999999999999888777766666666777888888889999999998
Q ss_pred HhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHH
Q 025282 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFV 238 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~ 238 (255)
..+....++.|..|+ ++++++++++....+|..++|.+++.+. ..||+..|++.+++.++..+..++
T Consensus 305 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 305 LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 888888899999875 5679999999999999999999999988 789999999988877666655443
No 99
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.63 E-value=7.1e-15 Score=127.09 Aligned_cols=150 Identities=13% Similarity=0.067 Sum_probs=126.3
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 169 (255)
|.+.++.|.++.+.++..+...++..++.++.|++.||+|||+.+..+.+..+++.++..+.++.+.+.+..++.|++.+
T Consensus 244 p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 323 (406)
T PRK11551 244 PSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVV 323 (406)
T ss_pred HHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 45666789999999999999999999999999999999999999988777777777777777788778888888999888
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c-chhHHHHHHHHHHHHHHHHHHHHh
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
...+...+++.|.+|+++|++++++.+....+|..+||.+.+.+. + .+|...+++.....++..+..++.
T Consensus 324 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 324 GGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999999999999999999999999987 3 466666766666555555444444
No 100
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.63 E-value=3.1e-15 Score=127.30 Aligned_cols=142 Identities=13% Similarity=0.067 Sum_probs=123.5
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHHHHhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSF--WMIAICRMLVGVGE 168 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~G~~~ 168 (255)
.+.++++.+..+.+++.+.+.++..+++++.|++.||+|||+.+.++.++.+++.++..+.++. ..+++..++.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 309 (377)
T TIGR00890 230 PYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTW 309 (377)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHh
Confidence 4557788888889999999999999999999999999999999999999888888877776643 33445678888888
Q ss_pred hhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHH
Q 025282 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPF 232 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~ 232 (255)
+...+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+. ..||++.|.+.+++.++.
T Consensus 310 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 310 GGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred ccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 8888888889999999999999999999999999999999999988 889999999888776554
No 101
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.63 E-value=2.6e-15 Score=129.05 Aligned_cols=151 Identities=14% Similarity=0.117 Sum_probs=118.1
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCch----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPF----RLIGVGLTVWTLAVVGCGFSFSFWMIAICRM 162 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (255)
|.+|.+.+++|.|..+.|++.+++.++..+++++.|++.||+||| +.+.+...+. ........++++.+++.|+
T Consensus 25 p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~ 102 (382)
T PRK11128 25 PFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIG 102 (382)
T ss_pred hhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHH
Confidence 445677888999999999999999999999999999999999984 3332222221 2223344578999999999
Q ss_pred HHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhcc
Q 025282 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (255)
Q Consensus 163 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p 241 (255)
+.|++.+...+...+++.++ .++|+++.+.......+|..+||++++++. +.|||..|++.++..++..+. .+..|
T Consensus 103 l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~ 179 (382)
T PRK11128 103 LFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLG-QLLRP 179 (382)
T ss_pred HHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHccC
Confidence 99999888888888887776 366888888889999999999999999998 889999998877654443333 33344
Q ss_pred C
Q 025282 242 L 242 (255)
Q Consensus 242 ~ 242 (255)
|
T Consensus 180 ~ 180 (382)
T PRK11128 180 T 180 (382)
T ss_pred C
Confidence 4
No 102
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.63 E-value=2e-14 Score=127.54 Aligned_cols=157 Identities=11% Similarity=0.073 Sum_probs=118.6
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHH---HHHhhhHHHHHHHHHHHHhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVG---CGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~G~~ 167 (255)
++++++|.+..+.++......++..++.++.|+++||+|||+.+..+.++..+..+. ...+++...+++++++.|++
T Consensus 276 ~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 355 (490)
T PRK10642 276 YLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVI 355 (490)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 455678888888888888889999999999999999999999988887654433322 22234577788889999988
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c-chhHHHHHHHHHHHHHHHHHHHHhccCccc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
.+........++.|.+|++.|++++++.+....++..++|.+.+++. . .+|+..+++..+++++..+..+ +.||+++
T Consensus 356 ~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~ 434 (490)
T PRK10642 356 LNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETAN 434 (490)
T ss_pred HHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccC
Confidence 88777778888899999999999999754445566678888888876 3 4577777766666665555544 4488876
Q ss_pred ccc
Q 025282 246 GAC 248 (255)
Q Consensus 246 ~~~ 248 (255)
+..
T Consensus 435 ~~~ 437 (490)
T PRK10642 435 RPL 437 (490)
T ss_pred CCC
Confidence 543
No 103
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.62 E-value=1.6e-14 Score=125.41 Aligned_cols=154 Identities=19% Similarity=0.094 Sum_probs=133.3
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
+.++.+|.+..+.+++.+...++..++.++.+++.||.++++.+..+..+.+++.++..+.++.+.+.+..++.|++.+.
T Consensus 249 ~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 328 (417)
T PRK10489 249 LADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAI 328 (417)
T ss_pred HHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 44445899999999999999999999999999999998888888888888888888888888888888889999999888
Q ss_pred HhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
..+...+++.|..|++.||+++++++....+|..+||.+.|.+. ..|++..+++.+.+.++..++..+..|+.+
T Consensus 329 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 329 SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 88888899999999999999999999999999999999999998 788998888888776666666655555543
No 104
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.61 E-value=3.9e-14 Score=121.71 Aligned_cols=143 Identities=13% Similarity=0.033 Sum_probs=128.0
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
.+.+++|.++.+.|++.+...++.+++.++.+++.||+|+|+.+.++.++..+..++.++.++.+.+++.+++.|+..+.
T Consensus 230 ~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~ 309 (382)
T TIGR00902 230 IYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAV 309 (382)
T ss_pred HHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHH
Confidence 33456999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHhhhhhcCcccchhHHHHHHH-hhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHH
Q 025282 171 FISLAAPFIDDNAPVAKKTAWLGVFY-MCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVL 235 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~ 235 (255)
..+....++.+. |+++|++++++++ ...++|..+|+.++|++. ..|+ ..|++.+++.++..++
T Consensus 310 ~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 310 CHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 999999999998 8899999999986 567899999999999998 7786 6677777777655444
No 105
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.60 E-value=2e-14 Score=125.07 Aligned_cols=154 Identities=16% Similarity=0.067 Sum_probs=104.9
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHH---HhhhHH-HHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG---FSFSFW-MIAICRMLVG 165 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~l~G 165 (255)
.++++++|++..+.|++.+++.++..+++++.|+++||+|||++++++..+.+++..... .++... .......+.+
T Consensus 35 ~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (420)
T PRK09528 35 IWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGG 114 (420)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 366777999999999999999999999999999999999999999887666554433221 111111 0111122223
Q ss_pred hhhhhHhhhhHhhhhhcCc--ccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 166 VGEASFISLAAPFIDDNAP--VAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
+..+.........+.++.+ .+++++.++.......+|..++|++++.+...+|++.|++.+++.++..++.++..+++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 115 IYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred HHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhcccccc
Confidence 3333322222222333322 24567788888888999999999999988766999999998887776666655554443
No 106
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.60 E-value=4e-15 Score=122.52 Aligned_cols=156 Identities=15% Similarity=0.164 Sum_probs=138.9
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 169 (255)
|.+.+.++.+..|..++.....++..+++..+|..+|++|||+.+.+.....++..++.+.++|+..+++.|.+.|+|.|
T Consensus 102 ~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~g 181 (528)
T KOG0253|consen 102 PALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVG 181 (528)
T ss_pred HHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCC
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcccccc
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKGAC 248 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 248 (255)
+ .|...++-.|..|..+|..-+-.. ..+.+|.++...+.-.+. ..||||.......+..+.+.+ .++.||+++...
T Consensus 182 g-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f-~~w~~ESpRf~~ 258 (528)
T KOG0253|consen 182 G-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARF-LVWVYESPRFYL 258 (528)
T ss_pred C-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHH-HhhcccCcchhh
Confidence 9 788899999999999998877666 899999999998888777 889999988888665554444 456788887543
No 107
>PRK03699 putative transporter; Provisional
Probab=99.60 E-value=5e-14 Score=121.56 Aligned_cols=149 Identities=13% Similarity=0.099 Sum_probs=125.5
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 169 (255)
+++++++|++..+.+++.+.+.++..++.++.|+++||++||+.+.....+..+...+....++.+.+.+..++.|++.+
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 309 (394)
T PRK03699 230 EYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSS 309 (394)
T ss_pred HHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 35567889999999999999999999999999999999999999988888777777777677777777778888999888
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
..++...++..|..| ++++...+.......+|..++|.+.+++. ..|++..+++.+++.++..+...+.
T Consensus 310 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 310 AIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 888888888888776 55678888888889999999999999998 8899999998888776665544333
No 108
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.60 E-value=2.1e-14 Score=120.76 Aligned_cols=146 Identities=21% Similarity=0.229 Sum_probs=134.9
Q ss_pred ccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchH-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 92 IQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFR-LIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 92 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
..+.+|.+..+.++..+...++..++.++.+++.||+|||+ .+..+..+..++.+.....++.+.+.+..++.|++.+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~ 281 (352)
T cd06174 202 LQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGF 281 (352)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhc
Confidence 33445889999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHH
Q 025282 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
..+....++.|..|+++|++.+++.+....+|..+++.+.+.+. ..+|+..+.+.+++.++..+..+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 282 AFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred cchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999999999999999999999999999999998 88999999999988877666543
No 109
>PRK12382 putative transporter; Provisional
Probab=99.60 E-value=3.5e-14 Score=122.26 Aligned_cols=144 Identities=14% Similarity=0.168 Sum_probs=125.3
Q ss_pred ccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhh
Q 025282 94 GDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFIS 173 (255)
Q Consensus 94 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~ 173 (255)
++.+.+ ..++....+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++.|++.+...+
T Consensus 244 ~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 321 (392)
T PRK12382 244 ASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFP 321 (392)
T ss_pred HhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHH
Confidence 444544 346667778888899999999999999999999999999888888888888888888899999999998888
Q ss_pred hhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 174 LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 174 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
.....+.|.+|+++|+++.++++....+|..++|.+.+++. ..||++.|.+.+++.++..+..+++
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 322 ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 88888999999999999999999999999999999999998 8899999999998877776665544
No 110
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.59 E-value=1.7e-14 Score=123.24 Aligned_cols=147 Identities=15% Similarity=0.019 Sum_probs=109.9
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchH--HHH------HHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFR--LIG------VGLTVWTLAVVGCGFSFSFWMIAICRM 162 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (255)
++++++|.+..+.+++.+...++..++.++.|++.||+|||+ ... .+.++..+........++.+.......
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVA 320 (399)
T ss_pred HHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 556778999999999999999999999999999999999986 111 111111111222222234444444444
Q ss_pred HHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cch-hHHHHHHHHHHHHHHHHHHHH
Q 025282 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN-WRYAFWGEAILMFPFAVLGFV 238 (255)
Q Consensus 163 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~-w~~~f~~~~~~~~~~~~~~~~ 238 (255)
+.+.+.+ ..+...+++.|.+|+++|++++++.+....+|..++|.+.+.+. ..| |+..|.+.+++.++..+..++
T Consensus 321 ~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 321 LGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 4444444 77889999999999999999999999999999999999999998 777 999999888877666655443
No 111
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.58 E-value=1.9e-14 Score=124.30 Aligned_cols=138 Identities=17% Similarity=0.247 Sum_probs=122.3
Q ss_pred hHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhc
Q 025282 103 DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDN 182 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~ 182 (255)
.+.+.++..++..++.+..|++.||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+...+...+++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45666677788889999999999999999999999988888888877788888888999999999999999999999999
Q ss_pred CcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhc
Q 025282 183 APVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMK 240 (255)
Q Consensus 183 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~ 240 (255)
.|+++||+.+++.+....+|..+||.+++.+. ..||++.|++.+++.++..++.++..
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988 88999999999988887777665543
No 112
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.58 E-value=3.8e-14 Score=124.19 Aligned_cols=155 Identities=8% Similarity=-0.091 Sum_probs=122.2
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh-----h------hHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-----F------SFWMIA 158 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-----~------~~~~~~ 158 (255)
|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.+++++.+++.++.++. + +...+.
T Consensus 308 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (481)
T TIGR00879 308 PTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIV 387 (481)
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHH
Confidence 56778889988888999999999999999999999999999999999988888777766621 1 222333
Q ss_pred HHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHH
Q 025282 159 ICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 159 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
...++.+.......+....++.|.+|+++|++++++.+....+|.+++|.+.+.+. ..+|++.|++.++++++..+..+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 388 FILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVY 467 (481)
T ss_pred HHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHh
Confidence 33333332222334566677899999999999999999999999999999999888 78999999999888887777776
Q ss_pred HhccCcc
Q 025282 238 VMKPLQL 244 (255)
Q Consensus 238 ~~~p~~~ 244 (255)
++.||.+
T Consensus 468 ~~~~~~~ 474 (481)
T TIGR00879 468 FFLPETK 474 (481)
T ss_pred eecccCC
Confidence 6666543
No 113
>PRK03545 putative arabinose transporter; Provisional
Probab=99.58 E-value=1.9e-13 Score=117.72 Aligned_cols=149 Identities=15% Similarity=0.125 Sum_probs=122.4
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHH-HHHHHhhhHHHHHHHHHHHHhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAV-VGCGFSFSFWMIAICRMLVGVGE 168 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~G~~~ 168 (255)
|.+++++|.+..+.+++.+...++..+++++.|+++||+|||+.. .+..+..++. .+....++.+.+++..++.|++.
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~ 308 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAI 308 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 456677899999999999999999999999999999999988754 4444444443 33455677888888899999988
Q ss_pred hhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhc
Q 025282 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMK 240 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~ 240 (255)
+...+.....+.+..| ++|++++++++....+|..+||+++|.+. +.|++..|++.+++.++..+......
T Consensus 309 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 309 MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred hcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 7777777788888876 68899999999999999999999999999 99999999999988877666665553
No 114
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.57 E-value=5.3e-14 Score=124.05 Aligned_cols=150 Identities=14% Similarity=0.024 Sum_probs=114.9
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHH--HHHHhhhHHHHHHHHHHHHhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVV--GCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~G~~ 167 (255)
+++++++|++..+.++..+...++..++.++.|+++||+|||+.+.....+..++.. .....++.+.+.+.+++.|++
T Consensus 283 ~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 362 (467)
T PRK09556 283 VYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFL 362 (467)
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 366788999999999999999999999999999999999999877665444443332 222335666677788888865
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhh-hhhhhhhhhhhhcc-------------chhHHHHHHHHHHHHHHH
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS-GYAIGYVYGGWVGH-------------YNWRYAFWGEAILMFPFA 233 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~-------------~~w~~~f~~~~~~~~~~~ 233 (255)
...........+.|.+|++.||++.|+.+...++ |..++|.+.|++.. .+|+..|++.++..++..
T Consensus 363 ~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~ 442 (467)
T PRK09556 363 VFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCI 442 (467)
T ss_pred HhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHH
Confidence 4444333446677999999999999999998886 77889988888764 579999999877777766
Q ss_pred HHHHHh
Q 025282 234 VLGFVM 239 (255)
Q Consensus 234 ~~~~~~ 239 (255)
+..++.
T Consensus 443 ~~~~~~ 448 (467)
T PRK09556 443 CLMAIV 448 (467)
T ss_pred HHHHHH
Confidence 555444
No 115
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.57 E-value=1.9e-13 Score=117.98 Aligned_cols=158 Identities=11% Similarity=0.108 Sum_probs=123.7
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVGVGEA 169 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~g 169 (255)
.+.+++|.+..+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++..+....+ +...+ .-++.|++.+
T Consensus 230 ~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g 307 (393)
T PRK09705 230 AFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLG 307 (393)
T ss_pred HHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhcc
Confidence 44456899999999999999999999999999999999999999988888777766554333 22222 2346688888
Q ss_pred hHhhhhHhhhhhcCc-ccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cc-hhHHHHHHHHHHHHHHHHHHHHhccCcccc
Q 025282 170 SFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY-NWRYAFWGEAILMFPFAVLGFVMKPLQLKG 246 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~-~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~ 246 (255)
...+.......+..+ +++|++..++.+....++..++|.+.+++. .. +|...|.+.++.+++..+....+.||++..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 308 GAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred chHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 887877777777775 578999999999999999999999999998 54 488888888887777776667777776554
Q ss_pred cccc
Q 025282 247 ACFL 250 (255)
Q Consensus 247 ~~~~ 250 (255)
+..+
T Consensus 388 ~~~~ 391 (393)
T PRK09705 388 LWVK 391 (393)
T ss_pred hhcc
Confidence 4333
No 116
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.56 E-value=1.7e-13 Score=117.67 Aligned_cols=146 Identities=11% Similarity=0.090 Sum_probs=120.2
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 169 (255)
|.+.++.|.+.++.+++.+...++..+++++.|++.||+|+|+++..+.++.+++.+... . ........++.|++.+
T Consensus 224 p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~ 300 (381)
T PRK03633 224 PLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGF 300 (381)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHH
Confidence 455566788988999999999999999999999999999999999888888777665443 2 2334456777888777
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHH
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFV 238 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~ 238 (255)
...+....++.|..|+++++.+.+..+...++|..+||.++|++. +.+|++.|.+.+.+.++..+..++
T Consensus 301 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 301 TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 788999999999999888888888888899999999999999998 889999999988877655544443
No 117
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.55 E-value=1.6e-13 Score=118.46 Aligned_cols=185 Identities=16% Similarity=0.155 Sum_probs=142.8
Q ss_pred cCchhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccc-cccCCcchhHHHHHHHHHHHHhHhhHHHh
Q 025282 45 FTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQG-DFDLNNFQDGVLSSAFMVGLLVASPIFAS 123 (255)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~ 123 (255)
+.+||.+.+..+..++.....+.+..... |++++ |.+.+.+..|++.++..++.+++++.+|+
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~w----------------pYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~ 93 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMW----------------PYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGI 93 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecc----------------hhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcc
Confidence 34556677777777777666665544322 56655 67778889999999999999999999999
Q ss_pred hhcccCc-hHHHHHHHHHHHHHHHHH-HHh---h-hHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHh
Q 025282 124 LARSVNP-FRLIGVGLTVWTLAVVGC-GFS---F-SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYM 197 (255)
Q Consensus 124 l~dr~G~-r~~~~~~~~~~~~~~~~~-~~~---~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 197 (255)
...|.+. |+.++.+.++..+++++. ++. + ..+.++++|++.|+|.|.. ...-+++++....++|.++++....
T Consensus 94 Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~ 172 (488)
T KOG2325|consen 94 WSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSG 172 (488)
T ss_pred cccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhh
Confidence 9999986 888999999999999988 332 3 6888999999999997776 5568899998888999999999999
Q ss_pred hhhhhhhhhhhhhhhhc---cch-----------hHHHHHHHHHHHHHHHHHHHHhccCcccc
Q 025282 198 CLPSGYAIGYVYGGWVG---HYN-----------WRYAFWGEAILMFPFAVLGFVMKPLQLKG 246 (255)
Q Consensus 198 ~~~~g~~~g~~~~~~l~---~~~-----------w~~~f~~~~~~~~~~~~~~~~~~p~~~~~ 246 (255)
+..+|.++||.++..+. ..| +..+-|+.+++.++..+..+++.+|..+.
T Consensus 173 ~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 173 GFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 88999999998887664 222 23455667777777666666665555443
No 118
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.53 E-value=8.2e-14 Score=119.91 Aligned_cols=135 Identities=13% Similarity=0.155 Sum_probs=112.5
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHHHHHHhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVV-GCGFSFSFWMIAICRMLVGVGE 168 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~G~~~ 168 (255)
+++.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++..+..+..+ +....++.+.+.+..++.|++.
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLV 342 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 456678899999999999999999999999999999999999998888776543333 3334456666777777788777
Q ss_pred hhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cch-hHHHHHH
Q 025282 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN-WRYAFWG 224 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~-w~~~f~~ 224 (255)
+...+....++.|.+|+++|++++|+.+....+|..++|++.+.+. ..| |+..+..
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 343 QGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred ccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 7777888899999999999999999999999999999999999998 667 7765554
No 119
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.52 E-value=7.4e-13 Score=117.53 Aligned_cols=151 Identities=18% Similarity=0.196 Sum_probs=128.0
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-----FSFWMIAICRMLVG 165 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G 165 (255)
.+..+..-|+...+++..+..+..++.++++|.++||++||++++.+-++.++..+..++. .+.+.+++..++.|
T Consensus 35 wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g 114 (524)
T PF05977_consen 35 WLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLG 114 (524)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 3444556678889999999999999999999999999999999999988876655544432 37889999999999
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhcc
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p 241 (255)
++.+...|..++++.|..|+++...++++.+...++..++||.++|.+. ..|-.+.|.+.++.-++..+....+++
T Consensus 115 ~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 115 IGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999999999999999999999999988 788889999887765554444444443
No 120
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.52 E-value=4.5e-13 Score=117.20 Aligned_cols=155 Identities=14% Similarity=0.176 Sum_probs=124.2
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc----ccCchHHHHHH-HHHHHHHHHHHHHhhhHH---------
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR----SVNPFRLIGVG-LTVWTLAVVGCGFSFSFW--------- 155 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~G~r~~~~~~-~~~~~~~~~~~~~~~~~~--------- 155 (255)
+.+.+++|.+....+++..+..+...+.+++.|+++| |+|||+.++++ .+...++.++.++++++.
T Consensus 28 ~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~ 107 (477)
T TIGR01301 28 TPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDK 107 (477)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccc
Confidence 4566889999999999999999999999999999999 59999998875 666666667777765542
Q ss_pred --------HHHHHHHHHHhhhhhHhhhhHhhhhhcCcccch--hHHHHHHHhhhhhhhhhhhhhhhhhc---c-------
Q 025282 156 --------MIAICRMLVGVGEASFISLAAPFIDDNAPVAKK--TAWLGVFYMCLPSGYAIGYVYGGWVG---H------- 215 (255)
Q Consensus 156 --------~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~---~------- 215 (255)
.++++-.+..++.....+...++++|..|+++| +.+.++.+.+.++|.++|+.+++... .
T Consensus 108 ~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~ 187 (477)
T TIGR01301 108 KTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTE 187 (477)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccc
Confidence 233334455567788888889999999998865 68999999999999999999998652 1
Q ss_pred ------chhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 216 ------YNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 216 ------~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
.+.|+.|++.+++.++..++..+..+|.+
T Consensus 188 ~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 188 ACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 27789999988888887777777767754
No 121
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.52 E-value=7.1e-14 Score=119.59 Aligned_cols=139 Identities=9% Similarity=0.027 Sum_probs=111.3
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHH--HHHHH--hhhHHHHHHHHHHHHh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAV--VGCGF--SFSFWMIAICRMLVGV 166 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~l~G~ 166 (255)
++++++|.++.+.++......++..++.++.|+++||+|||+.+.....+..+.. +...+ .++.+.+++..++.|+
T Consensus 245 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 324 (394)
T TIGR00883 245 YLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLAL 324 (394)
T ss_pred HHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 4557789999999999999999999999999999999999998775555444333 22222 2466777778889999
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHH-HHhhhhhhhhhhhhhhhhhc-cch-hHHHHHHHHHHH
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGV-FYMCLPSGYAIGYVYGGWVG-HYN-WRYAFWGEAILM 229 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~-~~~-w~~~f~~~~~~~ 229 (255)
+.+...+...+++.|.+|+++|+++.++ ++....+|..++|.+++.+. +.| |+..++......
T Consensus 325 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 325 IGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 9989999999999999999999999997 45666788899999999988 666 887776665543
No 122
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.51 E-value=1e-12 Score=108.38 Aligned_cols=149 Identities=19% Similarity=0.221 Sum_probs=137.4
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 166 (255)
|.++.+++|+|+|.++.|++.++..++..+.+++..++++|+|.++.+..++++.+++.++-... +.+.++.+..+.|.
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~ 111 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGA 111 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHh
Confidence 68889999999999999999999999999999999999999999999999999999999998877 88889999999999
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cc-hhHHHHHHHHHHHHHHHHHHH
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY-NWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~-~w~~~f~~~~~~~~~~~~~~~ 237 (255)
+.+....+.++++-+.|| |+-+..+|+|.....+|..+++.+...+. +. +||....+-+.++++..+.++
T Consensus 112 gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 112 GIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL 183 (395)
T ss_pred hHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999 78999999999999999999998888887 44 799999999888877665554
No 123
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.51 E-value=3.4e-13 Score=117.87 Aligned_cols=149 Identities=13% Similarity=-0.010 Sum_probs=106.0
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhccc--Cch-HHHHH---HHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV--NPF-RLIGV---GLTVWTLAVVGCGFSFSFWMIAICRMLV 164 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--G~r-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 164 (255)
++.+++|++..+.++..+.+.++..++.++.|+++||+ ++| ..... +..+..+...... ..+...+.+..+..
T Consensus 269 ~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 347 (434)
T PRK11663 269 YMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACFFTI 347 (434)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHH
Confidence 55577899999999999999999999999999999998 333 32222 1111111111111 22333333444444
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhc
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMK 240 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~ 240 (255)
|++...........+.|.+|+++|++++|+.+....+|..++|.+.+++. ..||+..|++.+++.++..+..+...
T Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 348 GFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred HHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 54333233334456789999999999999999999999999999999988 88999999999888877766665543
No 124
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.51 E-value=1.8e-13 Score=119.41 Aligned_cols=155 Identities=11% Similarity=-0.005 Sum_probs=123.7
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc----cCchH-HHHHHHHHHHHHHHHHHHhhh------HHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS----VNPFR-LIGVGLTVWTLAVVGCGFSFS------FWMIA 158 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r~-~~~~~~~~~~~~~~~~~~~~~------~~~~~ 158 (255)
+++.+++|+++.+.|++.++..+..++..++.|+++|| +|||| .++.+....+++.+++...++ ...++
T Consensus 24 ~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 103 (437)
T TIGR00792 24 FFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAY 103 (437)
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 57788999999999999999999999999999999998 67744 566787888888777766543 45667
Q ss_pred HHHHHHHhhhhhHhhhhHhhhhhcC-cccchhHHHHHHHhhhhhhhhhhhhhhhhhc--------cchhHHHHHHHHHHH
Q 025282 159 ICRMLVGVGEASFISLAAPFIDDNA-PVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--------HYNWRYAFWGEAILM 229 (255)
Q Consensus 159 ~~~~l~G~~~g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--------~~~w~~~f~~~~~~~ 229 (255)
+.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+. ..+||+.+.+.+++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~ 183 (437)
T TIGR00792 104 ITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIG 183 (437)
T ss_pred HHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHH
Confidence 7788889888887777788888887 5689999999998888888777665544332 358999999999888
Q ss_pred HHHHHHHHHhccCcc
Q 025282 230 FPFAVLGFVMKPLQL 244 (255)
Q Consensus 230 ~~~~~~~~~~~p~~~ 244 (255)
++..++.++..||++
T Consensus 184 ~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 184 VVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHcCCEecC
Confidence 777766666556554
No 125
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.50 E-value=2e-13 Score=120.06 Aligned_cols=146 Identities=15% Similarity=0.185 Sum_probs=121.0
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc--cCchHHHHH--HHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS--VNPFRLIGV--GLTVWTLAVVGCGFSFSFWMIAICRMLVG 165 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr--~G~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 165 (255)
|.+.+++|.+..+.+++.++..++..+++++.|+++|| +++|+...+ +.++.+++.+++.+.++++.+++.+++.|
T Consensus 265 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G 344 (455)
T TIGR00892 265 VPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFG 344 (455)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 34456789999999999999999999999999999997 344443333 33444555566677788999999999999
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cc-hhHHHHHHHHHHHHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY-NWRYAFWGEAILMFPFAVL 235 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~-~w~~~f~~~~~~~~~~~~~ 235 (255)
++.+...+...+++.|.+|++++++++++++....+|..+||.+++.+. .. +|++.|++.+++.++..+.
T Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 345 LSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888 55 6999999988876655543
No 126
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.50 E-value=2.1e-13 Score=120.48 Aligned_cols=156 Identities=10% Similarity=0.004 Sum_probs=118.3
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh--hH--HHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--SF--WMIAICRMLVG 165 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~l~G 165 (255)
|.+.++.|.+.....+......+..+++.++.+++.||+|||+.++.+.++.+++.+++.... +. .....+.++.+
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 374 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV 374 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 566778888877777777788888999999999999999999999999999888887765432 11 12233344444
Q ss_pred hhhhhH-hhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhh------hhc-cchhHHHHHHHHHHHHHHHHHHH
Q 025282 166 VGEASF-ISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGG------WVG-HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 166 ~~~g~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~------~l~-~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
++.+.. .+....++.|.+|+++|++++++.+....+|..+++.+.+ ++. ..+|++.|++.++++++..++.+
T Consensus 375 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (479)
T PRK10077 375 AAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMW 454 (479)
T ss_pred HHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHH
Confidence 444432 3667889999999999999999999999988888865544 333 67889999998888777777766
Q ss_pred HhccCccc
Q 025282 238 VMKPLQLK 245 (255)
Q Consensus 238 ~~~p~~~~ 245 (255)
++.||+++
T Consensus 455 ~~~~e~~~ 462 (479)
T PRK10077 455 KFVPETKG 462 (479)
T ss_pred hccccCCC
Confidence 66676543
No 127
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.50 E-value=7.3e-14 Score=117.24 Aligned_cols=177 Identities=15% Similarity=0.094 Sum_probs=140.3
Q ss_pred chhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc
Q 025282 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (255)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 126 (255)
+.+.+..+++.+++.+..|..+. .+.| -++.|+.|.+..++++..+.+-++...|.+++|+++|
T Consensus 250 ~Nk~iW~la~a~vfvYivR~gi~-----dW~p-----------~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSD 313 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRYGIN-----DWGP-----------LYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSD 313 (448)
T ss_pred cChHHHHHHHHHHHHHHHHHHHh-----hhHH-----------HHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34566777888888888887664 3444 4788999999999999999999999999999999999
Q ss_pred cc--CchHHHHH-HHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhh
Q 025282 127 SV--NPFRLIGV-GLTVWTLAVVGCGFSF--SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS 201 (255)
Q Consensus 127 r~--G~r~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 201 (255)
|+ |||...-+ .++...++.+..-+++ |+++..++.+..|+..-+..-+.-....|..|++--|++.|+.+.+..+
T Consensus 314 klfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl 393 (448)
T COG2271 314 KLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYL 393 (448)
T ss_pred HhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHH
Confidence 94 66665543 3444444444444554 5688888899999888887777777789999999999999999999999
Q ss_pred -hhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 202 -GYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 202 -g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
|.+.+....+++. .+||...|.+..+.++++.++....
T Consensus 394 ~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 394 IGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 8888888888887 7899999998887776666655443
No 128
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.49 E-value=6e-13 Score=115.74 Aligned_cols=147 Identities=9% Similarity=-0.043 Sum_probs=109.5
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCc-hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNP-FRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 168 (255)
+++++++|++..+.|++.+++.++..++++++|+++||+|| |+++.++.++.++...+..+.++++.+++.|++.|++.
T Consensus 27 ~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 106 (418)
T TIGR00889 27 SYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAY 106 (418)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 57888999999999999999999999999999999999965 77888888888888888888899999999999999987
Q ss_pred hhHhhhhHhhhh--------hcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 169 ASFISLAAPFID--------DNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 169 g~~~~~~~~~~~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
+...+...++.. |......|.+..| .+|.++||.+++.+. ...|+. |++.++..++..++ .+.
T Consensus 107 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~~-f~~~~~~~~~~~~~-~~~ 178 (418)
T TIGR00889 107 MPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNIQ-LYITAGSSALLGVF-ALT 178 (418)
T ss_pred ccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhHH-HHHHHHHHHHHHHH-Hhc
Confidence 776666555432 2222223444443 468888888888776 445653 44555555544443 334
Q ss_pred ccCcc
Q 025282 240 KPLQL 244 (255)
Q Consensus 240 ~p~~~ 244 (255)
.||.+
T Consensus 179 ~~e~~ 183 (418)
T TIGR00889 179 LPDIP 183 (418)
T ss_pred CCCCC
Confidence 56653
No 129
>TIGR00895 2A0115 benzoate transport.
Probab=99.48 E-value=5.6e-13 Score=114.29 Aligned_cols=124 Identities=18% Similarity=0.079 Sum_probs=104.6
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 169 (255)
|.+.+++|.+..+.++..+...++..++.++.|++.||+|||+......+......++.....+.+.+++..++.|++.+
T Consensus 274 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (398)
T TIGR00895 274 PKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVN 353 (398)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 56778889999999999999999999999999999999999955444444333333333335677778888899999999
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhh
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (255)
...+...+++.|.+|+++|++++|+......+|..+||.++|++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 354 GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999999998875
No 130
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.48 E-value=3.1e-13 Score=118.74 Aligned_cols=150 Identities=11% Similarity=-0.024 Sum_probs=105.9
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhccc--CchHHH-HHHHHHHHHHHHHHHH--hhhHHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV--NPFRLI-GVGLTVWTLAVVGCGF--SFSFWMIAICRMLV 164 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--G~r~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~ 164 (255)
.++++++|++..+.++....+.++..++.++.|+++||+ +||+.. .....+..++.++..+ ..+.+..++..++.
T Consensus 278 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (452)
T PRK11273 278 TYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVI 357 (452)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHH
Confidence 355667889888899999999999999999999999999 555432 2222333333332222 23444444555555
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhh-hhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYA-IGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
|.+..........++.|.+|+++||++.|+.+....+|.. ++|.+.+.+. +.||+..|++.++.+++..+....+
T Consensus 358 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 358 GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 5543333333345678999999999999999988888765 4799999988 8899999998888777766665544
No 131
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.48 E-value=8.3e-13 Score=117.17 Aligned_cols=141 Identities=12% Similarity=0.079 Sum_probs=111.2
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS--FSFWMIAICRMLVGVGE 168 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~ 168 (255)
++++++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++..+..++.... .+.+.+.+..++.+...
T Consensus 301 ~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (496)
T PRK03893 301 YLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLG 380 (496)
T ss_pred HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHh
Confidence 4446899999999999999999999999999999999999999888877766665544333 34444444455544433
Q ss_pred hhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHH
Q 025282 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFP 231 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~ 231 (255)
....+....++.|.+|+++|++++++.+....+|..+||.+++.+. ..||+..+...+....+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 381 QGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred cccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 3445667788999999999999999999999999999999999998 88999888666554433
No 132
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.48 E-value=2.3e-12 Score=110.71 Aligned_cols=140 Identities=15% Similarity=0.076 Sum_probs=119.1
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
.+.+|.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+..++.+.+++..++.|++.+.
T Consensus 230 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 309 (382)
T PRK11128 230 IYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTV 309 (382)
T ss_pred HHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 33366899988999999999999999999999999999999999999999999888888899999999999999999999
Q ss_pred HhhhhHhhhhhcCcccchhHHHHHHH-hhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHH
Q 025282 171 FISLAAPFIDDNAPVAKKTAWLGVFY-MCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPF 232 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~ 232 (255)
..+....++.+. +++++++..+.++ ....+|..+||.++|.+. ..|+ ..|+..+++.++.
T Consensus 310 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 310 CHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 989999998887 5566788899876 556778899999999998 6677 4666666655443
No 133
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.48 E-value=2.7e-12 Score=111.10 Aligned_cols=148 Identities=14% Similarity=0.107 Sum_probs=115.8
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHH-HHHHHHHHHHHHHHH-----hhhHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIG-VGLTVWTLAVVGCGF-----SFSFWMIAICRML 163 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l 163 (255)
|.+.+++|.+..+.+++.+...++..++.+..|+++||+|||+.+. .+.+..++..+.+.. .++.+.+++..++
T Consensus 246 p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (402)
T TIGR00897 246 PMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIA 325 (402)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHH
Confidence 4556778999999999999999999999999999999999988764 333333333333222 2456677778888
Q ss_pred HHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 164 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
.|++.+...+ ....+.|..| ++|++++|+.+....+|..++|.+++.+. ..||+..|++.+++.++..++.++.
T Consensus 326 ~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 326 LGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 8988887655 3556677655 68999999999999999999999999998 7899999999988877766666554
No 134
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.47 E-value=4.1e-13 Score=115.11 Aligned_cols=144 Identities=19% Similarity=0.200 Sum_probs=129.3
Q ss_pred ccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc-cCchHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhhhhhHh
Q 025282 96 FDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSF--SFWMIAICRMLVGVGEASFI 172 (255)
Q Consensus 96 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~ 172 (255)
+|++++++.-+.+.|..-.-+..++.||++|| +|+|+.++.|.++..++.++.+.+. +...++++..+.++|.|..-
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 44999988888888888888999999999999 6999999999999999999999884 78899999999999999999
Q ss_pred hhhHhhhhhcCccc--chhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 173 SLAAPFIDDNAPVA--KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 173 ~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
+...++++|.+|++ +|-.+++++++..++|+.++|++.+++. .+||...|...++-..+..+..++.
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999875 5788899999999999999999999999 9999999999988777666665554
No 135
>PRK09952 shikimate transporter; Provisional
Probab=99.47 E-value=1.2e-12 Score=114.52 Aligned_cols=149 Identities=15% Similarity=0.068 Sum_probs=111.1
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH---h-hhHHHHHHHHHHHHh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF---S-FSFWMIAICRMLVGV 166 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~l~G~ 166 (255)
++++++|.+......+.....+...++.++.|+++||+|||+.+..+.++..++.+.+.. . ++.+.+++..++.++
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 556778888776655666667777888999999999999999988887766554433322 1 234444556677788
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHh-hhhhhhhhhhhhhhhhc-c--chhHHHHHHHHHHHHHHHHHHHHh
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYM-CLPSGYAIGYVYGGWVG-H--YNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~-~--~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
+.+...+...+++.|.+|++.|+.+.++.+. ...+|..++|.+.+++. . .+|+..+...+++.++..+..+..
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 8888888889999999999999999988544 45588899999999886 2 358888887777777666665443
No 136
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.47 E-value=4.1e-12 Score=112.80 Aligned_cols=150 Identities=19% Similarity=0.286 Sum_probs=135.6
Q ss_pred ccc-cccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 025282 90 TGI-QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (255)
Q Consensus 90 ~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 168 (255)
|.+ ++++|.++...|++.+.+.+|.+++.++.+++.+|+++++.+..+.+.++++.+..+++++.+..++..++.|++.
T Consensus 242 Pl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~ 321 (524)
T PF05977_consen 242 PLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAW 321 (524)
T ss_pred hHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 444 4678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
....+...+.+.+..|++.||+.++++++....+..+|.++.|.+. ..|-+..+.+.++..++..++.+..
T Consensus 322 ~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 322 IIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 8899999988877665555555443
No 137
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.46 E-value=2.1e-12 Score=115.00 Aligned_cols=156 Identities=12% Similarity=0.014 Sum_probs=104.2
Q ss_pred ccccccccCCcchhHH------------HHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhh----
Q 025282 90 TGIQGDFDLNNFQDGV------------LSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS---- 153 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~---- 153 (255)
|.+.++.|.+..+.+. ...+..++..++.++.+++.||+|||+.++++..+.+++.++.++..+
T Consensus 312 p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~ 391 (502)
T TIGR00887 312 KVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLST 391 (502)
T ss_pred HHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 4555667765442211 233444566678899999999999999998888887777665554321
Q ss_pred HHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c----------chhHHHH
Q 025282 154 FWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H----------YNWRYAF 222 (255)
Q Consensus 154 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~----------~~w~~~f 222 (255)
...+...-+...++.....+....+.+|.+|++.|++++++.+....+|.+++|.+.+.+. . .++...|
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 471 (502)
T TIGR00887 392 HGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVL 471 (502)
T ss_pred hHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHH
Confidence 1111111111112222234556677899999999999999999999999999999988876 2 2446677
Q ss_pred HHHHHHHHHHHHHHHHhccCcccc
Q 025282 223 WGEAILMFPFAVLGFVMKPLQLKG 246 (255)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~p~~~~~ 246 (255)
++.++++++..+.. ++.||+++.
T Consensus 472 ~i~~~~~~~~~i~~-~~lpEt~~~ 494 (502)
T TIGR00887 472 EIFALFMFLGILFT-LLIPETKGK 494 (502)
T ss_pred HHHHHHHHHHHHHh-eEeccCCCC
Confidence 88877776665544 456876543
No 138
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.44 E-value=5e-12 Score=106.95 Aligned_cols=150 Identities=15% Similarity=0.114 Sum_probs=128.5
Q ss_pred cccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHhh
Q 025282 89 GTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-FSFWMIAICRMLVGVG 167 (255)
Q Consensus 89 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~ 167 (255)
-|.+++..|++.+..+++.-.+.++..+|..+.|++.|| +.|+.+.....+.++..+.+.+. ++.+..++.-++.|+.
T Consensus 235 ~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a 313 (394)
T COG2814 235 RPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFA 313 (394)
T ss_pred HHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 378899999999999999999999999999999999999 99999988878877777766655 4566666677778888
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMK 240 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~ 240 (255)
.+.........+++ .-+|.+..+.+++....++|..+|..++|.+. +.|+....++.+++.++..++.+...
T Consensus 314 ~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 314 FSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred hhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777777777 44589999999999999999999999999999 99999999999998887777765543
No 139
>TIGR00898 2A0119 cation transport protein.
Probab=99.44 E-value=3.4e-12 Score=113.57 Aligned_cols=139 Identities=14% Similarity=-0.022 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHHHHhhhhhHhhhhHhhhhhc
Q 025282 105 VLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSF--WMIAICRMLVGVGEASFISLAAPFIDDN 182 (255)
Q Consensus 105 ~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~G~~~g~~~~~~~~~~~~~ 182 (255)
+...+..+..+++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++..++.+++.+..++....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445567778889999999999999999999999988888887776543 4555566677777788888889999999
Q ss_pred CcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhccCccc
Q 025282 183 APVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 183 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
+|++.|++++|+.+....+|.+++|.+.+ +...++...+.+.++..++..++.+ +.||+.+
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~~ 499 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGILTL-FLPETKG 499 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHHHHHH-cCcCCCC
Confidence 99999999999999999999999999988 4466677788888877776666654 4476543
No 140
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.43 E-value=1e-12 Score=114.96 Aligned_cols=155 Identities=12% Similarity=-0.015 Sum_probs=107.4
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHH---HHHHHHHH--hhhHHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWT---LAVVGCGF--SFSFWMIAICRMLV 164 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~l~ 164 (255)
+++++..|.+..+.++...++.++..++.++.|++.||+++++....+..+.. ++.+.... ..+.+......++.
T Consensus 276 ~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (438)
T TIGR00712 276 TYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVI 355 (438)
T ss_pred HHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 35566689999999999999999999999999999999965432222322221 11121112 12334333444455
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhh-hhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccC
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSG-YAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~ 242 (255)
|++.............|.+|+++|+++.|+.+....+| ..++|.+.|.+. +.||...|.+.+++.++..+..++++||
T Consensus 356 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (438)
T TIGR00712 356 GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIG 435 (438)
T ss_pred HHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 54432222222356789999999999999998887776 478999999988 7899999998888777777777777776
Q ss_pred cc
Q 025282 243 QL 244 (255)
Q Consensus 243 ~~ 244 (255)
++
T Consensus 436 ~~ 437 (438)
T TIGR00712 436 EK 437 (438)
T ss_pred cc
Confidence 54
No 141
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.42 E-value=1.1e-12 Score=111.09 Aligned_cols=125 Identities=17% Similarity=0.271 Sum_probs=113.1
Q ss_pred ccccc-cccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHhh
Q 025282 90 TGIQG-DFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS-FWMIAICRMLVGVG 167 (255)
Q Consensus 90 ~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~ 167 (255)
|.+.+ .+|.+..+.+++.....++..++.++.+++.||+|||+.+..+..+.+++.++..+.++ .+.+++..++.|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 314 (365)
T TIGR00900 235 PYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVG 314 (365)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Confidence 45554 48999999999999999999999999999999999999999888888888888777774 88888899999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
.+...+...+++.|..|+++|+++.++.+....+|..++|.+++.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~ 361 (365)
T TIGR00900 315 YGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLA 361 (365)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998875
No 142
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.42 E-value=7.8e-12 Score=109.90 Aligned_cols=149 Identities=16% Similarity=0.220 Sum_probs=129.5
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCch--HHHHHHHHHHHHHHHHHHH--------hhhHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPF--RLIGVGLTVWTLAVVGCGF--------SFSFWMIAIC 160 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 160 (255)
+..+++|++..+...+..+..+..++|.+++|++.||+|.| +++.++++++.+..+...+ .++.+.+++.
T Consensus 307 ~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~ 386 (477)
T PF11700_consen 307 YATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVL 386 (477)
T ss_pred HHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHH
Confidence 55679999999999999999999999999999999999999 8888888887666555555 5688889999
Q ss_pred HHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc--cchhHHHHHHHHHHHHHHHHHHHH
Q 025282 161 RMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFV 238 (255)
Q Consensus 161 ~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~f~~~~~~~~~~~~~~~~ 238 (255)
-++.|++.|..++..-++.+|+.|+++.+..+|++.........+||++.+.+. ..+-|+.+....++.++..++.++
T Consensus 387 a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 387 AVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999988 445888888877776666655544
Q ss_pred h
Q 025282 239 M 239 (255)
Q Consensus 239 ~ 239 (255)
.
T Consensus 467 v 467 (477)
T PF11700_consen 467 V 467 (477)
T ss_pred c
Confidence 3
No 143
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.42 E-value=1.3e-11 Score=109.54 Aligned_cols=151 Identities=9% Similarity=0.070 Sum_probs=119.2
Q ss_pred ccccccccCCcchhHHHHH-HHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHH---HHh-hhHHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSS-AFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGC---GFS-FSFWMIAICRMLV 164 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~l~ 164 (255)
|++.+++|++.++.+++.. ...++.+++.++.|++.||+|+|+.+.++.++.++..+.. +.. ++.+.+.+.-++.
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~ 326 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFE 326 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 4666779999999999974 5668999999999999999999988777666555544322 232 3555555566676
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhc
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMK 240 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~ 240 (255)
.++.|...+...++..+..+++.+++..++.+....+|..+++.+.|++. ..||+..|.+.++++++..++....+
T Consensus 327 ~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 327 NLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667666777888899999999999999999999999998888899888 78999999999888887766665553
No 144
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.42 E-value=9.7e-12 Score=107.13 Aligned_cols=156 Identities=9% Similarity=-0.114 Sum_probs=115.5
Q ss_pred CCcccccccccCCcchhHHHH--HHHHHHHHhHhhHH-HhhhcccCchHHHHHHHHHH-HHHHHHHH---Hhhh-HHHHH
Q 025282 87 TPGTGIQGDFDLNNFQDGVLS--SAFMVGLLVASPIF-ASLARSVNPFRLIGVGLTVW-TLAVVGCG---FSFS-FWMIA 158 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~--~~~~~~~~~~~~~~-g~l~dr~G~r~~~~~~~~~~-~~~~~~~~---~~~~-~~~~~ 158 (255)
|.+|.+.++.|.+.++.|++. +...+...+.++++ ++..||+||||..++.+.+. ++.....+ ...+ ..+++
T Consensus 22 p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (390)
T TIGR02718 22 DALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAV 101 (390)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHH
Confidence 456889999999999999974 56677777888888 45799999998876665332 21222222 2222 33444
Q ss_pred HHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHH
Q 025282 159 ICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 159 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
...++.++..+...+....+..|..++++++.+.+....+..+|.++|+...+++. ..|||..|++.+++.++..+..+
T Consensus 102 ~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~ 181 (390)
T TIGR02718 102 GLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVL 181 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 45555667777777788888899999888898888888888999999998888888 88999999999988777666655
Q ss_pred HhccC
Q 025282 238 VMKPL 242 (255)
Q Consensus 238 ~~~p~ 242 (255)
+..|+
T Consensus 182 ~~~~~ 186 (390)
T TIGR02718 182 WLKDR 186 (390)
T ss_pred HcCCC
Confidence 55444
No 145
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.40 E-value=3.6e-12 Score=110.04 Aligned_cols=141 Identities=9% Similarity=0.070 Sum_probs=121.1
Q ss_pred cCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhH
Q 025282 97 DLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAA 176 (255)
Q Consensus 97 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~ 176 (255)
+.+....|.+.++..+...++.+..|++.||+|+|+.+.++.++.++...+....++.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556678888998999999999999999999999999999999998888878888999999999999999877777777
Q ss_pred hhhhhcCcccchhHHHHH-HHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHH
Q 025282 177 PFIDDNAPVAKKTAWLGV-FYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 177 ~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
.++.+..+++.+++..+. .+....+|..+++.++|++. ..||+..|.+.+++.++..+...
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 788888888888877766 67888999999999999998 78999999999888777666543
No 146
>PRK10504 putative transporter; Provisional
Probab=99.38 E-value=2.5e-11 Score=107.06 Aligned_cols=122 Identities=12% Similarity=0.150 Sum_probs=104.9
Q ss_pred cccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHhhhh
Q 025282 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS---FSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 93 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~G~~~g 169 (255)
+..+|.++.+.++......++..++.++.+++.||+|||+++..+..+.++..++..+. ++.+.+.+..++.|++.+
T Consensus 289 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 368 (471)
T PRK10504 289 QIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNS 368 (471)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHH
Confidence 44688899999999999999999999999999999999999999988888777666553 334445556778889999
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
...+....++.+..|+++++.+.++.+....+|..+|+.+++.+.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll 413 (471)
T PRK10504 369 TRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLL 413 (471)
T ss_pred HHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888999999999999999999999999999999999998875
No 147
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.38 E-value=1.1e-12 Score=111.65 Aligned_cols=132 Identities=14% Similarity=0.082 Sum_probs=99.1
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccC-chHHHH-HHH-HHHHHHHHHHHH--hhhHHHHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN-PFRLIG-VGL-TVWTLAVVGCGF--SFSFWMIAICRMLVG 165 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-~r~~~~-~~~-~~~~~~~~~~~~--~~~~~~~~~~~~l~G 165 (255)
++.+++|.++.+.++..+.+.++..++.++.|++.||.+ +|+... ... ....++...... ..+...+.+..++.|
T Consensus 242 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 321 (379)
T TIGR00881 242 YLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALG 321 (379)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence 556778999999999999999999999999999999863 333222 222 111222222222 235555666677777
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAF 222 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f 222 (255)
+......+....++.|.+|+++|+++.++.+....+|..++|.+.+.+. ..||++.|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 322 FLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 7666666666788999999999999999999999999999999999998 88888754
No 148
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.38 E-value=5.5e-11 Score=102.94 Aligned_cols=145 Identities=11% Similarity=-0.014 Sum_probs=114.0
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-----FSFWMIAICRMLVG 165 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G 165 (255)
.+.+++|.++.+.++......++..++.++.|++.||+++|+.+.++.++.+++.++..+. .+.+.+++..++.|
T Consensus 241 ~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g 320 (406)
T PRK15402 241 ILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYA 320 (406)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHH
Confidence 4467789999899998888888899999999999999999999999888887777766653 35666778888999
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLG 236 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~ 236 (255)
++.+...+......... ++++||+..++.+....+|..+|+.+.+.+. ..++....+..++..++..++.
T Consensus 321 ~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK15402 321 FGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLV 391 (406)
T ss_pred HHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 99988877666665444 4489999999999999999999999999987 6666655555544444443433
No 149
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.38 E-value=1.2e-11 Score=120.10 Aligned_cols=145 Identities=16% Similarity=0.079 Sum_probs=124.6
Q ss_pred ccccccccCCcc-hhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 025282 90 TGIQGDFDLNNF-QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (255)
Q Consensus 90 ~~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 168 (255)
+++.+++|++.. +.+++.+...++.+++.++.|++.||+++++.+.++.++.+++.++..+..+.+.+++..++.|++.
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 336 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSA 336 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 356678899988 8999999999999999999999999999999999998888888888888889888889999999999
Q ss_pred hhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc--cchhHHHHHHHHHHHHHHHH
Q 025282 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAV 234 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~f~~~~~~~~~~~~ 234 (255)
+...+...+++.+..|+++||+++++.++...+|.++++.+++.+. ..++...|++.+.+.++..+
T Consensus 337 ~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 404 (1146)
T PRK08633 337 GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTL 404 (1146)
T ss_pred HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 9998999999999999999999999999999999988888877665 34566667666655444333
No 150
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.38 E-value=1.1e-11 Score=107.87 Aligned_cols=134 Identities=13% Similarity=0.110 Sum_probs=100.4
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh--
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG-- 167 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~-- 167 (255)
|.+.++.|.+..+.+...+...++..++.++.|++.||+|||+.+..+.++..+..++....++.....+.-++.|++
T Consensus 255 ~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (426)
T PRK12307 255 PTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMAT 334 (426)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 345556788888899999999999999999999999999999999888877766655444332211122222333332
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHH
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFW 223 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~ 223 (255)
.....+..+.++.|.+|+++||+++|+......+|..++|.+.+++. ..|+....+
T Consensus 335 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~ 391 (426)
T PRK12307 335 NVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALT 391 (426)
T ss_pred cccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHH
Confidence 22334556678899999999999999999999999999999999998 777665433
No 151
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.37 E-value=2.9e-11 Score=101.02 Aligned_cols=130 Identities=12% Similarity=0.081 Sum_probs=106.2
Q ss_pred cccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhh
Q 025282 95 DFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISL 174 (255)
Q Consensus 95 ~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~ 174 (255)
.+|+++.+.++..+.+..+..++.+..+++.||+|+|+.+.++..+.+++.++....++...+ ..-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999988888888777666555543333 3556889999999999
Q ss_pred hHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHH
Q 025282 175 AAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAI 227 (255)
Q Consensus 175 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~ 227 (255)
..+...+..|+ +.+.+.++. .+..+|..++|++.|.+. ..|.+..|++..+
T Consensus 251 ~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 251 IFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence 99999998874 455666665 566789999999999988 7888888875543
No 152
>PRK15075 citrate-proton symporter; Provisional
Probab=99.37 E-value=1.6e-11 Score=107.42 Aligned_cols=129 Identities=11% Similarity=0.004 Sum_probs=95.5
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHH-HHH---HhhhHHHHHHHHHHHHh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVV-GCG---FSFSFWMIAICRMLVGV 166 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~l~G~ 166 (255)
++++.+|++..+.++....+.++..++.++.|+++||+|||+.+..+..+..+..+ ... ..+++..+....++.|+
T Consensus 264 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (434)
T PRK15075 264 FGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSF 343 (434)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 45566899988889998899999999999999999999999998876554433221 111 12344444455666677
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhh-hhhhhhhhhhhhhhc-cchhH
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCL-PSGYAIGYVYGGWVG-HYNWR 219 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~g~~~~~~l~-~~~w~ 219 (255)
+.+...+....++.|.+|+++|+++.++.+... .++..++|.+.+++. ..|++
T Consensus 344 ~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 344 LYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 777777777788999999999999999865444 445778999999887 56653
No 153
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.36 E-value=2.9e-11 Score=105.50 Aligned_cols=123 Identities=16% Similarity=0.152 Sum_probs=103.1
Q ss_pred cccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHhhhhhHhh
Q 025282 95 DFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-FSFWMIAICRMLVGVGEASFIS 173 (255)
Q Consensus 95 ~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~ 173 (255)
.++ +..+.+++.+...++.+++.++++++.||+|+|+.+.++.++.+++.++..+. ++.+.+++..++.|++.+...+
T Consensus 252 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 330 (437)
T TIGR00792 252 VLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTG 330 (437)
T ss_pred ecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHH
Confidence 344 45567788888899999999999999999999999999998888887776665 4667777788899999999999
Q ss_pred hhHhhhhhcCc-------ccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchh
Q 025282 174 LAAPFIDDNAP-------VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNW 218 (255)
Q Consensus 174 ~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w 218 (255)
...++++|..+ ++++|.+.++.+....+|..+++.+.+.+. ..||
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 331 LVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999998875 456799999999999999999999998876 4444
No 154
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.36 E-value=1.7e-11 Score=107.15 Aligned_cols=149 Identities=9% Similarity=-0.002 Sum_probs=97.6
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHH--H--hhhHHHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG--F--SFSFWMIAICRMLVG 165 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~l~G 165 (255)
+++++++|.+..+.++..++..++..+++++.|+++||+|||+.+.++.++.++..+... . ..+....+..-.+.+
T Consensus 268 ~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (432)
T PRK10406 268 KYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCAL 347 (432)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 355677899988889988888888889999999999999999988776665443332221 1 123332222222333
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhh-hhhhhhhhhhhhccch-hHHHHHHHHHHHHHHHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS-GYAIGYVYGGWVGHYN-WRYAFWGEAILMFPFAVLGFV 238 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~-w~~~f~~~~~~~~~~~~~~~~ 238 (255)
++.+...+....++.|++|++.|++++|+.+...++ +....|.+.+.+...| |...++..++..++..+..++
T Consensus 348 ~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 348 LIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 344444455677889999999999999998776554 2334777777554334 555565555555555544444
No 155
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.36 E-value=1.1e-11 Score=109.39 Aligned_cols=151 Identities=12% Similarity=0.015 Sum_probs=114.9
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccC-----chHHHHHHHHHHH-HHHHHHHHhhhHHHH-HHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN-----PFRLIGVGLTVWT-LAVVGCGFSFSFWMI-AICRM 162 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----~r~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~ 162 (255)
+.+++++|++.++.+...+...+...+-.+ +|.++||++ ||+.++++.++.+ +.....+..++.... .+..+
T Consensus 50 ~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~ 128 (468)
T TIGR00788 50 PMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIF 128 (468)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 688889999999999999999999988555 999999997 7887788877663 443444444454444 44788
Q ss_pred HHHhhhhhHhhhhHhhhhhcCcccchhHHH---HHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHH
Q 025282 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWL---GVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFV 238 (255)
Q Consensus 163 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~---~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~ 238 (255)
+.+++.+...+..-++..|..+ +++.... +.......+|..+|+.+++.+. ..+|+..|++.+.+.++..+. .+
T Consensus 129 l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~-~~ 206 (468)
T TIGR00788 129 LAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFV-SN 206 (468)
T ss_pred HHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH-HH
Confidence 9999999999999999999998 5554433 3333444589999999999988 789999999998887766333 34
Q ss_pred hccCc
Q 025282 239 MKPLQ 243 (255)
Q Consensus 239 ~~p~~ 243 (255)
+.+|+
T Consensus 207 ~~~E~ 211 (468)
T TIGR00788 207 LSKER 211 (468)
T ss_pred hcccc
Confidence 44654
No 156
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.36 E-value=1.8e-11 Score=108.20 Aligned_cols=148 Identities=10% Similarity=-0.045 Sum_probs=107.2
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCch-------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPF-------RLIGVGLTVWTLAVVGCGFSFSFWMIAICRML 163 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 163 (255)
++.+++|++..+.+++.+++.++..++.++.|+++||+||| ....+..++.++..++....++.+...+..++
T Consensus 278 ~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l 357 (476)
T PLN00028 278 YFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMIL 357 (476)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 55677899999999999999999999999999999999865 23333333344444445555666666666677
Q ss_pred HHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 164 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
.+++.+...+...+++.+..| ++||...|+.+.+..+|..++|.+.+.-...+|+..|++.+++.++..++.++.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 358 FSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 777766666666677777655 789999999888777777777665431114579999999988877776666554
No 157
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.36 E-value=1.9e-11 Score=106.43 Aligned_cols=154 Identities=12% Similarity=-0.006 Sum_probs=120.5
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh---h-H--H---HHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF---S-F--W---MIAICR 161 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~---~-~--~---~~~~~~ 161 (255)
.+-++-|++..++.+.+....+...+..+++.++.||+|||+.++.+..++.+..+++.... + . | ..+++.
T Consensus 295 ~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~ 374 (485)
T KOG0569|consen 295 SIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAI 374 (485)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 56677789999999999999999999999999999999999999999999988888766542 1 1 1 123344
Q ss_pred HHHHhhhhh-HhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 162 MLVGVGEAS-FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 162 ~l~G~~~g~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
++..+..+. ..|...-+.+|.+|++.|..++++......+..++-...-..+. ..|- +.|..+.+++++..+..++.
T Consensus 375 ~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~ 453 (485)
T KOG0569|consen 375 FLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRY 453 (485)
T ss_pred HHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHh
Confidence 444444443 35777888999999999999999999888887776555544444 3444 78888989998888888899
Q ss_pred ccCccc
Q 025282 240 KPLQLK 245 (255)
Q Consensus 240 ~p~~~~ 245 (255)
.||++.
T Consensus 454 lPETkg 459 (485)
T KOG0569|consen 454 LPETKG 459 (485)
T ss_pred CcccCC
Confidence 999864
No 158
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.36 E-value=4.7e-11 Score=102.88 Aligned_cols=144 Identities=12% Similarity=-0.063 Sum_probs=110.6
Q ss_pred cccccccCCcchhHHHHHHHHH-HHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH------hhhHHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMV-GLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF------SFSFWMIAICRML 163 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l 163 (255)
.+.+|.|+++++.+++...... ...++.++.|++.||+|+|+.+..+..+.++..+.... .++...++....+
T Consensus 233 ~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (390)
T TIGR02718 233 LYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAF 312 (390)
T ss_pred HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHH
Confidence 3445689999999999888764 66677899999999999999998877665333322221 1233444555566
Q ss_pred HHhhhhhHhhhhHhhhhhcCcc-cchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHH
Q 025282 164 VGVGEASFISLAAPFIDDNAPV-AKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAV 234 (255)
Q Consensus 164 ~G~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~ 234 (255)
.+++.+...+.......+..++ +++++.+++.+...++|..+||.++|.+. ..|++..|.+.+++.++..+
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 313 GSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 6777788878888887777776 78999999999999999999999999998 78999999888776655443
No 159
>PRK10054 putative transporter; Provisional
Probab=99.35 E-value=2.4e-11 Score=105.02 Aligned_cols=143 Identities=18% Similarity=0.112 Sum_probs=117.7
Q ss_pred ccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHhhhhhHh
Q 025282 94 GDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-FSFWMIAICRMLVGVGEASFI 172 (255)
Q Consensus 94 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~g~~~ 172 (255)
++.+.+....+++...+.+.....+++.|++.||+++|+.+..++.+..++.....+. ++.+.+.+..++.|++.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 3456666677888888888888888999999999999999999998888888777764 577777788899999999888
Q ss_pred hhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHH
Q 025282 173 SLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 173 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
+.....+.+..|++.|+++.+..+ ...+|..+||.++|.+. +.|....|++.+....+..++.+
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 888899999999999999988765 55689999999999998 88888888887666554444443
No 160
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.34 E-value=6.9e-11 Score=101.94 Aligned_cols=151 Identities=17% Similarity=0.226 Sum_probs=120.5
Q ss_pred cccccc-CCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh-hhHHHHHH----HHHHHH
Q 025282 92 IQGDFD-LNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-FSFWMIAI----CRMLVG 165 (255)
Q Consensus 92 ~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~l~G 165 (255)
..++.| .+....+.+.++..++.++.-...+++..|+|.|+++.++.+..++=..+.+.. ++.+...+ ...+.|
T Consensus 233 yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG 312 (400)
T PF03825_consen 233 YLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHG 312 (400)
T ss_pred HHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhh
Confidence 345555 676777888888889999999999999999999999999999999999998887 55444333 345699
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhh-hhhhhhhhhhhhhhhc-cch------hHHHHHHHHHHHHHHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMC-LPSGYAIGYVYGGWVG-HYN------WRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~-~~~------w~~~f~~~~~~~~~~~~~~~ 237 (255)
+..+..+.....++.+..|++.|++++++++.. .++|..+|..++|++. ..| |...+.+.+++.++..++.+
T Consensus 313 ~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 313 LTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFV 392 (400)
T ss_pred HHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998765 6899999999999987 544 44555666666555555554
Q ss_pred HhccC
Q 025282 238 VMKPL 242 (255)
Q Consensus 238 ~~~p~ 242 (255)
++.+|
T Consensus 393 ~~fk~ 397 (400)
T PF03825_consen 393 ILFKP 397 (400)
T ss_pred hhccC
Confidence 44333
No 161
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.34 E-value=5.8e-11 Score=101.44 Aligned_cols=148 Identities=14% Similarity=0.172 Sum_probs=128.7
Q ss_pred CCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHh
Q 025282 98 LNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAP 177 (255)
Q Consensus 98 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~ 177 (255)
.+....|.+.+...+..++...+..++.+|+|.|+.++++..+.++=.++++++++.+.+.+.+.+.|+-.+........
T Consensus 256 ~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fk 335 (412)
T PF01306_consen 256 QGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFK 335 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCcccchhHHHHHH-Hhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCccc
Q 025282 178 FIDDNAPVAKKTAWLGVF-YMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 178 ~~~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
++.+.+|+|..++...+. +...++|..+.+.++|.+. +.|.+.+|++.+.+.++..++..+..+++++
T Consensus 336 YI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 336 YITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 999999998888888874 7888999999999999999 9999999999999888877777776655443
No 162
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.33 E-value=5.4e-11 Score=100.87 Aligned_cols=183 Identities=13% Similarity=0.082 Sum_probs=133.4
Q ss_pred CCcCchhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHH
Q 025282 43 SWFTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFA 122 (255)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g 122 (255)
-++++|.+++++++..+.+.+....++ |...+....|+ +....-|+.-+|++.++...+++-
T Consensus 39 Vy~rRW~vLl~~slL~~SN~~qWI~ya-----------------~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~m 100 (480)
T KOG2563|consen 39 VYPRRWVVLLAFSLLNFSNGMQWIQYA-----------------PINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAM 100 (480)
T ss_pred cchhHhHHHHHHHHHHhcCcchheeeh-----------------hHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHH
Confidence 344555555555555555544433332 23346667778 777788999999999999999999
Q ss_pred hhhcccCchHHHHHHHHHHHHHHHHHHHhh------hHH--HHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHH
Q 025282 123 SLARSVNPFRLIGVGLTVWTLAVVGCGFSF------SFW--MIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGV 194 (255)
Q Consensus 123 ~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~ 194 (255)
|+.||+|-|..++++..+.+++..+-..+. .++ ....++.+.+.++-....+-..+..-||++++|..+..+
T Consensus 101 w~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~ 180 (480)
T KOG2563|consen 101 WILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVL 180 (480)
T ss_pred HhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhH
Confidence 999999999999999999999998866653 344 666888888888877777777888999999999999999
Q ss_pred HHhhhhhhhhhhhhhhhhhc-cc------hhHH--HHHHHHHHHHHHHHHHHHhccCc
Q 025282 195 FYMCLPSGYAIGYVYGGWVG-HY------NWRY--AFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 195 ~~~~~~~g~~~g~~~~~~l~-~~------~w~~--~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
-.++..+|.++|.++...+. +. .|.. .|+..+.+..+..++..+.++++
T Consensus 181 ~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~ 238 (480)
T KOG2563|consen 181 GVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKK 238 (480)
T ss_pred HHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999988888776 32 3443 34444444444444444444443
No 163
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.31 E-value=1.5e-10 Score=99.55 Aligned_cols=149 Identities=14% Similarity=0.066 Sum_probs=111.0
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF-SFSFWMIAICRMLVGVGE 168 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~ 168 (255)
|++.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+...+..++.+++.
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~ 303 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGL 303 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4666778999999999999999999999999999999999999999888888877765543 455556666666677765
Q ss_pred hhHhhhhH-hhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc--cchhHHHHHHHHHHHHHHHHHHHHhc
Q 025282 169 ASFISLAA-PFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFVMK 240 (255)
Q Consensus 169 g~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~f~~~~~~~~~~~~~~~~~~ 240 (255)
....+... ....+..+++.++.+ ..+....+|..+||.+++++. ..+|++.+.+.+++.++.......+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 304 FALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred HhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 55444334 344454454555544 346677899999999999987 46899999988877665555544443
No 164
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.31 E-value=1.7e-10 Score=95.78 Aligned_cols=154 Identities=13% Similarity=0.085 Sum_probs=112.3
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
.+-+++|+++.|++.+...-.....+.+.+.|.++||+|||+..+..+++.+++++ +-..++++.++++|++.|++...
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSL 137 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSL 137 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHH
Confidence 44568999999999999999999999999999999999999999999999998885 55568999999999999999999
Q ss_pred HhhhhHhhh-hhcC----cccchhHHHHHHH-hhhhhhhhhhhhhhhhhc-cc--hhHHHHHHHHHHHHHHHHHHHHhcc
Q 025282 171 FISLAAPFI-DDNA----PVAKKTAWLGVFY-MCLPSGYAIGYVYGGWVG-HY--NWRYAFWGEAILMFPFAVLGFVMKP 241 (255)
Q Consensus 171 ~~~~~~~~~-~~~~----~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~-~~--~w~~~f~~~~~~~~~~~~~~~~~~p 241 (255)
.+..--++. .|.- |++..+..++... ..+++-.+++..++.++. .. |-..+|....++.++..+++...-+
T Consensus 138 LfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 138 LFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWP 217 (354)
T ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccc
Confidence 998888875 4543 2222233333222 122222334444554544 33 3477888888877777776665445
Q ss_pred Cccc
Q 025282 242 LQLK 245 (255)
Q Consensus 242 ~~~~ 245 (255)
|+..
T Consensus 218 ENyg 221 (354)
T PF05631_consen 218 ENYG 221 (354)
T ss_pred ccCC
Confidence 6543
No 165
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.30 E-value=1.3e-10 Score=100.62 Aligned_cols=146 Identities=15% Similarity=0.084 Sum_probs=113.2
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc-ccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR-SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 168 (255)
|.+.++.+.++.+.+++.+...++...+..+.+++.| |++.++.+..++++.+++.++.++.++++.+.+..++.|++.
T Consensus 232 p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~ 311 (400)
T PRK11646 232 PIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGS 311 (400)
T ss_pred hhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3444444446678888888888777766666677665 567677778888888888888888888888888888899998
Q ss_pred hhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cc---h-hHHHHHHHHHHHHHHHHH
Q 025282 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY---N-WRYAFWGEAILMFPFAVL 235 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~---~-w~~~f~~~~~~~~~~~~~ 235 (255)
+...+...+++.+..|+++||+++++.+....+|..+||.++|++. .. + ....+.+.++.+++..+.
T Consensus 312 ~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 312 IIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 8888899999999999999999999999999999999999999987 32 2 245555555554444433
No 166
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.30 E-value=1.7e-10 Score=99.79 Aligned_cols=146 Identities=14% Similarity=0.212 Sum_probs=106.0
Q ss_pred ccccccccCCcchhHHHHHHHH-HHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHH---HHh-hhHHHHHHHHH--
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFM-VGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGC---GFS-FSFWMIAICRM-- 162 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~-- 162 (255)
+.+.+++|+++++.+++..... ++..++.++.|++.||+|+|+.+.++.++..+..+.. ++. ++.+.+++..+
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 4567778999999999886654 5688999999999999999998877777666554433 343 35565555543
Q ss_pred --HHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 163 --LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 163 --l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
..|++.+...+....++.+.+|.+++ ++.+...++|..+++.++|.+. ..||+..|.+.++++++..++.+..
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 45566667777777888888876654 4444455667766667888888 8999999999988887766555443
No 167
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.30 E-value=1.9e-10 Score=99.36 Aligned_cols=144 Identities=11% Similarity=0.020 Sum_probs=115.3
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 169 (255)
|.+.+++|++.++.+++...+.++..++.++.+++.||.+++..+....+......++....++.+.+.+..++.|++.+
T Consensus 241 p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~ 320 (394)
T PRK10213 241 PVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFA 320 (394)
T ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 56677889999999999999999999999999999999654444443333344444555566778888888999999999
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHH
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAV 234 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~ 234 (255)
...+...+++.+..| +++++..++.....++|..+|+.++|.+. ..|++..+...+.+.++..+
T Consensus 321 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 321 LVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred hhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHH
Confidence 999988889988887 66778888888888999999999999998 88999888887766554443
No 168
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.30 E-value=2.1e-10 Score=99.11 Aligned_cols=145 Identities=11% Similarity=0.026 Sum_probs=113.4
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
.+++.+|.++.+.|++.+...++..++++..+++.||.++|+.+..+.. .++..++.++.++++...+..++.|++.+.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~ 309 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGF 309 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhh
Confidence 5567789999999999999999999999999999999999988887753 445555566677777777888899999998
Q ss_pred HhhhhHhhhhhcCcccc-hhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 025282 171 FISLAAPFIDDNAPVAK-KTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLG 236 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~ 236 (255)
..+...+.+.+..|++. +|++.++.+....+|..++..+.+.+...|-+..+.+.+...++...+.
T Consensus 310 ~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 310 FVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred hhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 88888888888766654 7999999999999999999988886665554544444333333333333
No 169
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.29 E-value=1.6e-10 Score=92.71 Aligned_cols=149 Identities=13% Similarity=0.092 Sum_probs=114.5
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-------FSFWMIAICRM 162 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 162 (255)
|.+++.+|+|.+|...+.+.-.+|..+ +++.|.+.|++|++.++.+|.+...++..+...+ .++|.+.+..+
T Consensus 26 ~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~ 104 (250)
T PF06813_consen 26 PQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLF 104 (250)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHH
Confidence 699999999999999999999999976 5899999999999999999999999999887764 35778888888
Q ss_pred HHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhc
Q 025282 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMK 240 (255)
Q Consensus 163 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~ 240 (255)
+.|.+.+...+.......+.|| ++||++.|+.-...++++.+-..+...+. ...-+..+.......++..+..++.+
T Consensus 105 l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 105 LGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred HHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhee
Confidence 8888877777777777788998 68999999999999998877655554444 32233333333333444444444443
No 170
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.28 E-value=4.5e-11 Score=100.60 Aligned_cols=148 Identities=16% Similarity=0.006 Sum_probs=118.9
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-------SFWMIAICRML 163 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l 163 (255)
+++++|+++..+.|.....+.+...+..+..|+++||+|.+|++.+....++++..+.++.. +....++..+.
T Consensus 244 ~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 323 (417)
T COG2223 244 YLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLA 323 (417)
T ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHH
Confidence 77889999999999999999999999999999999999999999999999988888877653 34444444444
Q ss_pred HHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cc-hhHHHHHHHHHHHHHHHHHHHHh
Q 025282 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY-NWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 164 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~-~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
.+++.|........++..++| ++-|.+.|+.....++|..+-|..-+... .. .+...|++...+.+++.++.+..
T Consensus 324 l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 324 LFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444445666777776 58999999999999999988888877776 44 59999999998888877766655
No 171
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.28 E-value=6.5e-11 Score=115.09 Aligned_cols=147 Identities=13% Similarity=0.078 Sum_probs=119.8
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh------------------
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS------------------ 151 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~------------------ 151 (255)
+++++.+|.+..+.|++.+.+.++.++++++.|++.|+.++++.+..+.++.+++.+...+.
T Consensus 250 ~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 329 (1140)
T PRK06814 250 LLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFL 329 (1140)
T ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhh
Confidence 35566789999999999999999999999999999998887776666666665555544442
Q ss_pred --hhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc--cchhHHHHHHHHH
Q 025282 152 --FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAI 227 (255)
Q Consensus 152 --~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~f~~~~~ 227 (255)
.+.+.+++..++.|++.+...+...+++.+.+|++.||+++|+.++...+|..+++++.+.+. ..++...+++.++
T Consensus 330 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 330 SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 677788888999999999999999999999999999999999999999999999999988876 4567777766665
Q ss_pred HHHHHHHHH
Q 025282 228 LMFPFAVLG 236 (255)
Q Consensus 228 ~~~~~~~~~ 236 (255)
+.++..+..
T Consensus 410 ~~~~~~~~~ 418 (1140)
T PRK06814 410 ANLIVAILI 418 (1140)
T ss_pred HHHHHHHHH
Confidence 544444333
No 172
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.27 E-value=3.2e-11 Score=106.31 Aligned_cols=161 Identities=16% Similarity=0.027 Sum_probs=107.6
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHH--------HHHHHHHH--HHHHHHHHH-hhhHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRL--------IGVGLTVW--TLAVVGCGF-SFSFWMIAI 159 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~--------~~~~~~~~--~~~~~~~~~-~~~~~~~~~ 159 (255)
++++++|.+..+.++..++..++..++.++.|+++||+++|+. +..+.... ++..+.... ..+....++
T Consensus 287 ~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (465)
T TIGR00894 287 FISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTII 366 (465)
T ss_pred HHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 5567789999999999999999999999999999998764421 11111111 111111122 234444444
Q ss_pred HHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c---chhHHHHHHHHHHHHHHHHH
Q 025282 160 CRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H---YNWRYAFWGEAILMFPFAVL 235 (255)
Q Consensus 160 ~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~---~~w~~~f~~~~~~~~~~~~~ 235 (255)
.-.+.+.+.+...+.......|..| +.+|.+.++.+....+|..++|.+.+.+. . .+|+..|.+.++..++..++
T Consensus 367 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~ 445 (465)
T TIGR00894 367 ILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIF 445 (465)
T ss_pred HHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555667776 58999999999999999999999999876 3 34999999998887776666
Q ss_pred HHHhcc-CccccccccCC
Q 025282 236 GFVMKP-LQLKGACFLHS 252 (255)
Q Consensus 236 ~~~~~p-~~~~~~~~~~~ 252 (255)
..+..+ |..++..++++
T Consensus 446 ~~~~~~~~~~~w~~~~~~ 463 (465)
T TIGR00894 446 YLIFGSAERQDWAKEEKD 463 (465)
T ss_pred eeeeecceecCCCCCccc
Confidence 554432 33334444433
No 173
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.27 E-value=4.8e-11 Score=105.61 Aligned_cols=150 Identities=20% Similarity=0.208 Sum_probs=135.8
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccC--chHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN--PFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
|.+.++.+.++.+.+.+.++..+...++.++.|+++|+.. ++.+..++++..+++.+.+.++++++.++...++.|++
T Consensus 322 ~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~ 401 (509)
T KOG2504|consen 322 PSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFC 401 (509)
T ss_pred HHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 5677799999999999999999999999999999999987 66667788888889999999999999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc--cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
.|.........+.|+.+.++-..+.|+...+.+++.++||++++++. ..+|...|+.+++..++..+..++.
T Consensus 402 ~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 402 VGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred HHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHh
Confidence 99999998899999999999999999999999999999999999887 4459999999999887777665544
No 174
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.26 E-value=2.6e-10 Score=97.64 Aligned_cols=132 Identities=16% Similarity=0.216 Sum_probs=102.0
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-----FSFWMIAICRMLVG 165 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G 165 (255)
.+++++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.+++.+. ++.+.+++..++.|
T Consensus 232 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 311 (385)
T TIGR00710 232 VYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVG 311 (385)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 4556889999999999999999999999999999999999999988888877777666543 23445566678889
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhh-hhhhhhhhhhhhc-cchhHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS-GYAIGYVYGGWVG-HYNWRYAFWG 224 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~-~~~w~~~f~~ 224 (255)
++.+...+.......|..| ++|+++.++.+..... |.+.++.++ .+. ..+|...+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 312 IGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hccccChHHHHHHH
Confidence 9999988888888888887 6899999998877655 555555544 444 4455544433
No 175
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.24 E-value=6.2e-11 Score=99.92 Aligned_cols=145 Identities=14% Similarity=0.112 Sum_probs=127.8
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
+-.+++|++..+..++.....+..+++++++|++.||+|.|+++.+++++..+.++..-+.....-+++.-.+.|...|.
T Consensus 278 fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~ 357 (438)
T COG2270 278 FGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGG 357 (438)
T ss_pred HHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcch
Confidence 34569999999999999999999999999999999999999999999999999988888887777788888999999999
Q ss_pred HhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc--cchhHHHHHHHHHHHHHHHHH
Q 025282 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVL 235 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~f~~~~~~~~~~~~~ 235 (255)
.++.+-++.++..|+++-++.+|++......+..+||.+-+.+. ..+-|..+....++..+..++
T Consensus 358 ~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 358 AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 99999999999999999999999999999999999999988887 556777766665554444433
No 176
>PRK09669 putative symporter YagG; Provisional
Probab=99.23 E-value=9.2e-11 Score=102.86 Aligned_cols=153 Identities=12% Similarity=0.008 Sum_probs=114.5
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc----cCch-HHHHHHHHHHHHHHHHHHHhh------hHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS----VNPF-RLIGVGLTVWTLAVVGCGFSF------SFWMIA 158 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r-~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 158 (255)
.++.+++|++..+.|.+..+..+..++..++.|+++|| +||| +.++++.+..++..++....+ ....++
T Consensus 34 ~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~ 113 (444)
T PRK09669 34 YFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYAC 113 (444)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 47788899999999999999999999999999999998 7874 555567677777665544443 255666
Q ss_pred HHHHHHHhhhhhHhhhhHhhhhhcC-cccchhHHHHHHHhhhhhhhhhhhhhhhh----hc----cchhHHHHHHHHHHH
Q 025282 159 ICRMLVGVGEASFISLAAPFIDDNA-PVAKKTAWLGVFYMCLPSGYAIGYVYGGW----VG----HYNWRYAFWGEAILM 229 (255)
Q Consensus 159 ~~~~l~G~~~g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~----l~----~~~w~~~f~~~~~~~ 229 (255)
+..++.+++.......-.++.+|+. ++++|.+..+....+..+|..+++.+... +. ..+|+..+.+.+++.
T Consensus 114 ~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~ 193 (444)
T PRK09669 114 VTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLG 193 (444)
T ss_pred HHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 6777778777777777778999988 56789988888888878877776654332 21 347888888888877
Q ss_pred HHHHHHHHHhccC
Q 025282 230 FPFAVLGFVMKPL 242 (255)
Q Consensus 230 ~~~~~~~~~~~p~ 242 (255)
++..+..++..+|
T Consensus 194 ~v~~~~~~~~~~e 206 (444)
T PRK09669 194 VVLFFCCFFMTKE 206 (444)
T ss_pred HHHHHHHhCCeEE
Confidence 6666555544444
No 177
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.23 E-value=1.5e-10 Score=100.59 Aligned_cols=140 Identities=11% Similarity=0.076 Sum_probs=96.3
Q ss_pred ccccccc--cCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHH-HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 025282 90 TGIQGDF--DLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRL-IGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (255)
Q Consensus 90 ~~~~~~~--~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 166 (255)
|.+.+++ +.+..+.++......++..++.+..|+++||+++|+. .....++..++.++.....+....+++-.+.++
T Consensus 266 p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (412)
T TIGR02332 266 PQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASM 345 (412)
T ss_pred HHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3444543 6677788999999999999999999999999997774 344444444433322222222222222223333
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cc-hhHHHHHHHHHHH
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY-NWRYAFWGEAILM 229 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~-~w~~~f~~~~~~~ 229 (255)
+.....+.......|.+|+++|++++|+.+....+|..++|.+.+.+. .. +|++.|++.+++.
T Consensus 346 g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 346 GSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 333333344455578899999999999999999999999999999888 55 5999988776643
No 178
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.23 E-value=2.3e-10 Score=101.15 Aligned_cols=124 Identities=18% Similarity=0.237 Sum_probs=109.2
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF----SFSFWMIAICRMLVGV 166 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~G~ 166 (255)
++++.+|.++.+.++......++..++.++.|++.||+|||+.+.++..+.+++..+..+ ..+++.+....++.|+
T Consensus 281 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 360 (485)
T TIGR00711 281 YLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGF 360 (485)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHH
Confidence 556678999999999999999999999999999999999999999999888888877663 2356677777899999
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
+.+...+.......+..|+++|+.+.++.+....+|..+|+.+.+.+.
T Consensus 361 g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~ 408 (485)
T TIGR00711 361 GMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTIL 408 (485)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988877888888899999999999999999999999999988875
No 179
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.23 E-value=2.2e-10 Score=97.33 Aligned_cols=124 Identities=17% Similarity=0.162 Sum_probs=99.9
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhccc-CchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV-NPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 168 (255)
|.+.++.|.+..+.+++.+.+.++.++++++.|++.||+ +||+.+.++.++.+++.+.+.+.++..... ..++.|++.
T Consensus 221 p~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~ 299 (355)
T TIGR00896 221 PAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQ 299 (355)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhh
Confidence 455566899999999999999999999999999999999 567777788788877777666655433222 456789999
Q ss_pred hhHhhhhHhhhhhcC-cccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 169 ASFISLAAPFIDDNA-PVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 169 g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
+..++...+.+.+.. ++++++...++.+....+|..++|.+.+++.
T Consensus 300 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 300 GGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred hhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888777776555 4567899999999888899999999999887
No 180
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.22 E-value=4.3e-10 Score=96.92 Aligned_cols=132 Identities=12% Similarity=-0.008 Sum_probs=90.7
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
.+++++|.++.+.+.+.+...++..++.++.+++.||+|||+.+.++..+..++.+...+.++.+..+..-.+.+.+.+.
T Consensus 229 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 308 (392)
T PRK10473 229 LLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSV 308 (392)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45577899998999999999999999999999999999999999999998888888877776665555555555555544
Q ss_pred HhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHH
Q 025282 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAI 227 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~ 227 (255)
..+.. ...+..|.++|+ +.......++..+|+.+++++. ..|+.....+.+.
T Consensus 309 ~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 309 GFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGI 361 (392)
T ss_pred HhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 44332 333444544443 3333344456666666666666 5566554444444
No 181
>PRK10133 L-fucose transporter; Provisional
Probab=99.20 E-value=7.9e-10 Score=96.82 Aligned_cols=136 Identities=11% Similarity=-0.098 Sum_probs=110.2
Q ss_pred cccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHh
Q 025282 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFI 172 (255)
Q Consensus 93 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~ 172 (255)
++.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++.+++.++..+.++.. .+..-.+.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999988888777766666655532 3456778999999999
Q ss_pred hhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cch-hHHHHHHHHHHHHH
Q 025282 173 SLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN-WRYAFWGEAILMFP 231 (255)
Q Consensus 173 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~-w~~~f~~~~~~~~~ 231 (255)
|...+...|..++ +.+.+.++..+ ..+|..++|++.+.+. ..| -|..|++..+..+.
T Consensus 366 P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 366 PTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV 424 (438)
T ss_pred HHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 9999999999874 56777777764 4467888888888887 666 78888766554433
No 182
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.20 E-value=5.4e-10 Score=89.71 Aligned_cols=162 Identities=18% Similarity=0.201 Sum_probs=118.7
Q ss_pred CCcCchhHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHH
Q 025282 43 SWFTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFA 122 (255)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g 122 (255)
.++.+...+.++|+.+.........++. -..++.||+|+..++.+.+......++.+++.|
T Consensus 261 ~f~ppfw~~~iicv~yyva~fPFi~lg~-------------------~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg 321 (459)
T KOG4686|consen 261 TFYPPFWVLVIICVLYYVAWFPFITLGP-------------------MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFG 321 (459)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHhhhhH-------------------HHHHHhhCCChhhccchhhhhhhhhhhhhhhHH
Confidence 3444455566666666655554444433 256899999999999999988888899999999
Q ss_pred hhhcccCchHHHHHHHH-HHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhh
Q 025282 123 SLARSVNPFRLIGVGLT-VWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS 201 (255)
Q Consensus 123 ~l~dr~G~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 201 (255)
.++||+|++...+.+.. .+.++..+..++ ++.=+.+..+.|+............++...|+++.|++.|..+...++
T Consensus 322 ~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNL 399 (459)
T KOG4686|consen 322 AISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNL 399 (459)
T ss_pred HhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhh
Confidence 99999999887665543 344444444433 222245567788877777666788889999999999999999999999
Q ss_pred hhhhhhhhhhhhc-c---chhHHHHHHH
Q 025282 202 GYAIGYVYGGWVG-H---YNWRYAFWGE 225 (255)
Q Consensus 202 g~~~g~~~~~~l~-~---~~w~~~f~~~ 225 (255)
|-.+-|++++.+. + +.|--.|.+.
T Consensus 400 gla~i~Iiag~i~d~~g~y~~le~ffl~ 427 (459)
T KOG4686|consen 400 GLAFIPIIAGFIADGDGSYDNLEAFFLI 427 (459)
T ss_pred hhhHHhhhhheeecCCCchhhHHHHHHH
Confidence 9999999999998 3 3344444443
No 183
>PRK09848 glucuronide transporter; Provisional
Probab=99.20 E-value=8.3e-10 Score=96.93 Aligned_cols=124 Identities=10% Similarity=0.103 Sum_probs=101.0
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--SFWMIAICRMLVGVGE 168 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~ 168 (255)
++++.+|.+....++......++.+++.++.+++.||+|+|+.+.++.++.+++.++..+.+ +++.+++..++.|+|.
T Consensus 254 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~ 333 (448)
T PRK09848 254 YVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQ 333 (448)
T ss_pred eEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 44556777665555555555677888999999999999999999999998888877776643 6677777788999999
Q ss_pred hhHhhhhHhhhhhcCccc-------chhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 169 ASFISLAAPFIDDNAPVA-------KKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
+...+...++.+|..|.+ ++|...++.+....+|..+|+.+.+.+.
T Consensus 334 ~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 334 GVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988754 3589999999999999999998887664
No 184
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.17 E-value=5.9e-10 Score=99.13 Aligned_cols=124 Identities=20% Similarity=0.182 Sum_probs=109.0
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS---FSFWMIAICRMLVGVG 167 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~G~~ 167 (255)
++++.+|.++.+.|+....+.++..++.++.|++.||+|+|+.+..+.++.+++.++.... ++.+...+..++.|++
T Consensus 285 ~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g 364 (495)
T PRK14995 285 ELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFS 364 (495)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Confidence 5677789999999999999999999999999999999999999998988888777665543 3566667788999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
.|...+.....+.+..|+++++.+.++.++...+|..+|+.+.+.+.
T Consensus 365 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 365 AASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888999999999999999999999999999999998887663
No 185
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.16 E-value=7.4e-10 Score=94.16 Aligned_cols=110 Identities=10% Similarity=-0.001 Sum_probs=92.8
Q ss_pred cccccccCCcchhHHHHHHHH-HHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh-----------hhHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFM-VGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-----------FSFWMIA 158 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 158 (255)
.+.+++|++.++.+.+..+.. ++..++.+++|++.||+|||+.+..+.++.++...+..+. ++.+.+.
T Consensus 234 ~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (356)
T TIGR00901 234 LFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLF 313 (356)
T ss_pred HHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHH
Confidence 444458999999998887766 5778999999999999999999998888887776655543 3456777
Q ss_pred HHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhh
Q 025282 159 ICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLP 200 (255)
Q Consensus 159 ~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 200 (255)
.+.++.+++.+...+...+++.|.+|+++||+.+++.++..+
T Consensus 314 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 314 LTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 888999999999999999999999999999999999887654
No 186
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.16 E-value=1.2e-10 Score=96.57 Aligned_cols=134 Identities=7% Similarity=0.010 Sum_probs=100.5
Q ss_pred HHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccch
Q 025282 109 AFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKK 188 (255)
Q Consensus 109 ~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r 188 (255)
+..+..+.|.++.+++.||+|||+.+..++++++++.++...+.+--.+.+.-+..-++..+.+.+.+.+..|.+|++.|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavR 468 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVR 468 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhh
Confidence 45567779999999999999999999999999999998887775433333333333344555667789999999999999
Q ss_pred hHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 189 TAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 189 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
+.+.|....+..+|+++.|.++ ......-..+..+.+.+.++..+...++ |-++
T Consensus 469 atgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~~~ilagIavcff-PiEt 522 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGALFILAGIAVCFF-PIET 522 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHHHHHHHHHHHheee-eecc
Confidence 9999999999999999999998 2223333345556666666666665554 5443
No 187
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.15 E-value=2.6e-10 Score=96.16 Aligned_cols=116 Identities=20% Similarity=0.220 Sum_probs=102.5
Q ss_pred ccccccCC-cchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHhh
Q 025282 92 IQGDFDLN-NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF---SFWMIAICRMLVGVG 167 (255)
Q Consensus 92 ~~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~ 167 (255)
+.+++|.+ ..+.+++.++..+...++.++.|++.||+|+|+..........+..+...+.. +....+...++.|++
T Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 312 (352)
T PF07690_consen 233 LQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFG 312 (352)
T ss_dssp CCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHH
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 48889999 78899999999999999999999999999998888877777777766655543 557777788899999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhh
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGY 207 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 207 (255)
.+...+....++.|..|+++||++.++.+...++|..+||
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 313 FGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999887
No 188
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.14 E-value=4.6e-12 Score=112.85 Aligned_cols=151 Identities=25% Similarity=0.441 Sum_probs=3.0
Q ss_pred cccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH------------------
Q 025282 89 GTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF------------------ 150 (255)
Q Consensus 89 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~------------------ 150 (255)
+++++++|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-+|.++.+++.+++++
T Consensus 26 lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~ 105 (539)
T PF03137_consen 26 LTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNG 105 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccc
Confidence 36999999999999999999999999999999999999999999999999999999998775
Q ss_pred --------h------------------------hhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhh
Q 025282 151 --------S------------------------FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMC 198 (255)
Q Consensus 151 --------~------------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 198 (255)
. .-+..+++++++.|+|....+++..+++-|..++++-+.+.|+....
T Consensus 106 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~ 185 (539)
T PF03137_consen 106 NSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAM 185 (539)
T ss_dssp ----------------------------------------------SSS-------------------------------
T ss_pred ccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHH
Confidence 0 01457788999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhc-c----------------------chhHHHHHHHHHHHHHHHHHHHHh
Q 025282 199 LPSGYAIGYVYGGWVG-H----------------------YNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 199 ~~~g~~~g~~~~~~l~-~----------------------~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
..+|.++|.++++.+. . ..|...|++.+.+.++.++..+++
T Consensus 186 ~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F 249 (539)
T PF03137_consen 186 SILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF 249 (539)
T ss_dssp ----------------------------------------------------------------
T ss_pred hhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999988663 1 137778888888877777766665
No 189
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.13 E-value=3e-09 Score=91.02 Aligned_cols=121 Identities=15% Similarity=0.068 Sum_probs=87.3
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHH---HHh-hhHHHHHHHHHHHHh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGC---GFS-FSFWMIAICRMLVGV 166 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~l~G~ 166 (255)
.+.+++|.++.+.+++.+...++..++.++.|++.||+|||+.+..+..+..+..+.. ... .+++.+.++..+.+.
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVG 299 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4566789999999999999999999999999999999999999988877654433222 222 244555555555555
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhh-hhhhhhhhhhhhhh
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMC-LPSGYAIGYVYGGW 212 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~ 212 (255)
+.+.........+.|..| ++++.+.++.+.. ..+|..+++++++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 300 CVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 556666666677788776 8899999987654 34666666666543
No 190
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.11 E-value=2.3e-09 Score=94.82 Aligned_cols=139 Identities=17% Similarity=0.226 Sum_probs=115.3
Q ss_pred hHHHHHHHHHHHHhHhhHHH----hhhcc-cCchHHH--HHHHHHHHHHHHHHHH---------hhhHHHHHHHHHHHHh
Q 025282 103 DGVLSSAFMVGLLVASPIFA----SLARS-VNPFRLI--GVGLTVWTLAVVGCGF---------SFSFWMIAICRMLVGV 166 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g----~l~dr-~G~r~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~G~ 166 (255)
.+++.+...+..++.+++.. ++.+| .+++... .+|+++.+++.+..++ ..|+++++...++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 67888888888888887755 45554 3344444 7888888888877765 4589999999999999
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhcc
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p 241 (255)
|.....|...+++.+..|++.||+++|++.....+|..+++.+..... ..+|...|...++..++..++.++..|
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998888776 668998888888887777777666544
No 191
>PRK11043 putative transporter; Provisional
Probab=99.10 E-value=8.8e-09 Score=89.03 Aligned_cols=124 Identities=8% Similarity=-0.033 Sum_probs=97.1
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHH---HH--hhhHHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGC---GF--SFSFWMIAICRMLV 164 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~l~ 164 (255)
|.+.+++|.+..+.++......++..++.+..+++.||+|+|+.+.......+++.+.. .. .++.+.+++...+.
T Consensus 227 p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (401)
T PRK11043 227 PFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVM 306 (401)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHH
Confidence 45666789999999998888889999999999999999999987766555544443322 22 23555566667788
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
|++.+..++.......|..| +++|++.++.+.....+...++.+.+.+.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~ 355 (401)
T PRK11043 307 AAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALI 355 (401)
T ss_pred HHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999988888888878776 68999999999988888888888887776
No 192
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.09 E-value=2.8e-09 Score=91.21 Aligned_cols=143 Identities=9% Similarity=-0.050 Sum_probs=97.9
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCc---hHHHHH-HHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNP---FRLIGV-GLTVWTLAVVGCGFSFSFWMIAICRMLVG 165 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~---r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 165 (255)
|.+.++.|.+.. .+....+..+...++ .++++||..| |+.... ..++.++.....++..+....++.-.+.|
T Consensus 216 p~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~ 291 (368)
T TIGR00903 216 EAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAG 291 (368)
T ss_pred HHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHH
Confidence 344466677654 555555555544444 4677777654 343332 34444444444455555555555566677
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
++.....+...++.+|.+|++.|+++.|+.+....+|.+++|++.+.+. .+-+..|.+.+++.++..+..+
T Consensus 292 ~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 292 LLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI-SSAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHH
Confidence 7777777778899999999999999999999999999999998887664 3677788888887777666654
No 193
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.09 E-value=2.8e-10 Score=99.32 Aligned_cols=153 Identities=12% Similarity=0.050 Sum_probs=122.4
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc----ccCchHHHH-HHHHHHHHHHHHHHHh-h-------hHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR----SVNPFRLIG-VGLTVWTLAVVGCGFS-F-------SFWM 156 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~G~r~~~~-~~~~~~~~~~~~~~~~-~-------~~~~ 156 (255)
+++.+..|+++...|++..+..+..++..++.|.++| |+||||..+ ++....+++.+++... + ....
T Consensus 26 ~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~ 105 (428)
T PF13347_consen 26 YFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVW 105 (428)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHH
Confidence 5777888999999999999999999999999999999 799766655 6778888877777655 3 2344
Q ss_pred HHHHHHHHHhhhhhHhhhhHhhhhhcCc-ccchhHHHHHHHhhhhhhhhhhhhhhhhh----c--c--chhHHHHHHHHH
Q 025282 157 IAICRMLVGVGEASFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYGGWV----G--H--YNWRYAFWGEAI 227 (255)
Q Consensus 157 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~--~--~~w~~~f~~~~~ 227 (255)
+.+..++..++.........++..|+.+ +++|.+..+.-..+..+|..+...+.+.+ . . .+|++...+.++
T Consensus 106 ~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~i 185 (428)
T PF13347_consen 106 LFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAI 185 (428)
T ss_pred HHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHH
Confidence 5677777789989988888999999997 57899999998888888886555444433 2 1 279999999999
Q ss_pred HHHHHHHHHHHhccC
Q 025282 228 LMFPFAVLGFVMKPL 242 (255)
Q Consensus 228 ~~~~~~~~~~~~~p~ 242 (255)
+.++..++..+..+|
T Consensus 186 v~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 186 VGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHhhhhhheeee
Confidence 888877777777666
No 194
>PRK09669 putative symporter YagG; Provisional
Probab=99.08 E-value=5.6e-09 Score=91.61 Aligned_cols=114 Identities=14% Similarity=0.138 Sum_probs=89.7
Q ss_pred chhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHhhhhhHhhhhHhh
Q 025282 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF--SFSFWMIAICRMLVGVGEASFISLAAPF 178 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~g~~~~~~~~~ 178 (255)
+..+.+.....+..+++.++++++.||+|+|+.+.++.++.++..+...+ .++.+.+++..++.|++.+...+...++
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566667778888899999999999999998887766654433222 3567778888899999999999999999
Q ss_pred hhhcCcc-------cchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 179 IDDNAPV-------AKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 179 ~~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
++|..+. ++.|...+..+....+|..+|+.+++.+.
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll 386 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWIL 386 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998862 23466788888899999999999988765
No 195
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.06 E-value=5.2e-09 Score=91.40 Aligned_cols=123 Identities=17% Similarity=0.228 Sum_probs=106.7
Q ss_pred cccc-cccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhh
Q 025282 91 GIQG-DFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--SFWMIAICRMLVGVG 167 (255)
Q Consensus 91 ~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~ 167 (255)
++.+ .++.+ ...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++..+.+ +.+.+++..++.|++
T Consensus 250 y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~ 328 (428)
T PF13347_consen 250 YYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIG 328 (428)
T ss_pred HHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhh
Confidence 4433 34544 5678888899999999999999999999999999999999999999888886 999999999999999
Q ss_pred hhhHhhhhHhhhhhcCcc-------cchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 168 EASFISLAAPFIDDNAPV-------AKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
.+.......++++|..+. ++.|...++.+....+|..+++.+.+.+.
T Consensus 329 ~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l 382 (428)
T PF13347_consen 329 YGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLL 382 (428)
T ss_pred hcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence 999999999999999874 34588899999999999999988877664
No 196
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.06 E-value=5.5e-10 Score=100.74 Aligned_cols=151 Identities=25% Similarity=0.408 Sum_probs=133.9
Q ss_pred cccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh-----------------
Q 025282 89 GTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS----------------- 151 (255)
Q Consensus 89 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~----------------- 151 (255)
+..+++.|+++.++.|++.+.+-++..+...+..++.-|..|-+.+-+|+++++++.+++++-
T Consensus 120 IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~ 199 (735)
T KOG3626|consen 120 ITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQS 199 (735)
T ss_pred hhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcc
Confidence 358999999999999999999999999999999999999999999999999999999998861
Q ss_pred ---h------------------------------h-HH-HHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHH
Q 025282 152 ---F------------------------------S-FW-MIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFY 196 (255)
Q Consensus 152 ---~------------------------------~-~~-~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~ 196 (255)
+ + ++ .+++++++.|+|....+++..+++-|...+++-+.++|+..
T Consensus 200 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~ 279 (735)
T KOG3626|consen 200 VENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILY 279 (735)
T ss_pred ccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHH
Confidence 0 0 22 56778999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhhhc--c------------------chhHHHHHHHHHHHHHHHHHHHHh
Q 025282 197 MCLPSGYAIGYVYGGWVG--H------------------YNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 197 ~~~~~g~~~g~~~~~~l~--~------------------~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
....+|.++|.++++++. + ..|...|++.+.+.++.++..+++
T Consensus 280 ~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~f 342 (735)
T KOG3626|consen 280 SMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFF 342 (735)
T ss_pred HHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999998874 1 148888889998888887777666
No 197
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.05 E-value=4e-09 Score=86.19 Aligned_cols=142 Identities=21% Similarity=0.383 Sum_probs=116.5
Q ss_pred ccccccccCCc--chhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhh--HHHHHHHHHHHH
Q 025282 90 TGIQGDFDLNN--FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS--FWMIAICRMLVG 165 (255)
Q Consensus 90 ~~~~~~~~~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~G 165 (255)
+.+..+++.+. .+.++..+.+.++..++.++.|.+.||+|||+.+..+.....++.+++.+..+ .+.+++.|++.|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 105 (338)
T COG0477 26 PLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQG 105 (338)
T ss_pred HHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 45556665554 47899999999999999999999999999998888888766666667777665 899999999999
Q ss_pred hhhhhHhhhhHhhhhhcCcc-cchhHHHHHHHh-hhhhhhhhhhhhhhhhc-c--chhHHHHHHHHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPV-AKKTAWLGVFYM-CLPSGYAIGYVYGGWVG-H--YNWRYAFWGEAILMFP 231 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~-~--~~w~~~f~~~~~~~~~ 231 (255)
++.+...+....++.|+.|+ ++|+...+.... ...+|..+++.+++.+. . .+||+.|.+.......
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 106 LGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred hhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 99999999999999999997 688999998888 57888888887777766 2 5899977776665543
No 198
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.04 E-value=4.4e-09 Score=93.04 Aligned_cols=154 Identities=7% Similarity=-0.065 Sum_probs=112.7
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc----ccCc-hHHHHHHHHHHHHHHHHHHHhh------hHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR----SVNP-FRLIGVGLTVWTLAVVGCGFSF------SFWMIA 158 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~G~-r~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 158 (255)
.++.+.+|++....|.+..+..+..++..++.|+++| |+|| |+.++++....+++.+++...+ .+..++
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~ 110 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVC 110 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 4677888999999999999999999999999999999 5698 5666677777777766554322 244556
Q ss_pred HHHHHHHhhhhhHhhhhHhhhhhcC-cccchhHHHHHHHhhhhhhhhhhhhhhhh----hc----cchhHHHHHHHHHHH
Q 025282 159 ICRMLVGVGEASFISLAAPFIDDNA-PVAKKTAWLGVFYMCLPSGYAIGYVYGGW----VG----HYNWRYAFWGEAILM 229 (255)
Q Consensus 159 ~~~~l~G~~~g~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~----l~----~~~w~~~f~~~~~~~ 229 (255)
+..++.+++.........++..|+. ++++|.+..+.-..+.++|..+.+.+... +. ..+|+....+.+++.
T Consensus 111 ~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~ 190 (473)
T PRK10429 111 VTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFF 190 (473)
T ss_pred HHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 6667778888888888889999998 68899998888677667665555443332 11 236777777777766
Q ss_pred HHHHHHHHHhccCc
Q 025282 230 FPFAVLGFVMKPLQ 243 (255)
Q Consensus 230 ~~~~~~~~~~~p~~ 243 (255)
++..+..++..+|.
T Consensus 191 ~~~~~~~~~~~~e~ 204 (473)
T PRK10429 191 IVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHcCceec
Confidence 65555555545554
No 199
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.04 E-value=4.9e-09 Score=92.75 Aligned_cols=124 Identities=18% Similarity=0.054 Sum_probs=96.1
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF-----SFSFWMIAICRMLVG 165 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G 165 (255)
++.++..-+.+..+++.+...++.+++.++++++.||+|+|+.+.++.++..++.+...+ ..+.+.+++..++.|
T Consensus 256 y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g 335 (473)
T PRK10429 256 YYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLN 335 (473)
T ss_pred eEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 343333334556677777777888999999999999999999999888776666555432 345667777888899
Q ss_pred hhhhhHhhhhHhhhhhcCc-------ccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 166 VGEASFISLAAPFIDDNAP-------VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
++.+...+...++++|..+ .++.|..++......-+|..+++.+.+++.
T Consensus 336 ~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 336 IGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999966 334566888999999999999998888764
No 200
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.04 E-value=2.4e-09 Score=92.79 Aligned_cols=147 Identities=17% Similarity=0.172 Sum_probs=132.7
Q ss_pred cccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHh
Q 025282 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFI 172 (255)
Q Consensus 93 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~ 172 (255)
.+|.+..+...|........+-++.-++.+++.+|+|+-+++.+++.+.++=.+..+...|.|+.+...+++|+..+..+
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliW 477 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIW 477 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHH
Confidence 46777777778888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhhcCcccchhHHHHHHHh-hhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 173 SLAAPFIDDNAPVAKKTAWLGVFYM-CLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 173 ~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
....++++...||+-|..+.++.+. ..++|-.+|.+++|.+. ..+-|..|.++++.+++.+++....
T Consensus 478 aa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 478 AAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999997755 46889999999999999 8999999999998887776665544
No 201
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.03 E-value=1.7e-08 Score=89.98 Aligned_cols=139 Identities=13% Similarity=0.136 Sum_probs=107.3
Q ss_pred hHHHHHHHHHHHHhHhhHH----HhhhcccCchHHHHHHHHHHHHHHHHHHHhhh---------HHHHHHHHHHHHhhhh
Q 025282 103 DGVLSSAFMVGLLVASPIF----ASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS---------FWMIAICRMLVGVGEA 169 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~----g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~G~~~g 169 (255)
.+++.++..+...+..++. +++.+|++.++.+.+|+++.+++.+..++..+ .++++...++.|+|..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5666677776666665555 77788888888899999999999988877765 4688889999999999
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-----------cchhHHHHHHHHHHHHHHHHHHHH
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-----------HYNWRYAFWGEAILMFPFAVLGFV 238 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-----------~~~w~~~f~~~~~~~~~~~~~~~~ 238 (255)
...|...+++.+..|++.||+++|++.....+|..++..+.+... ..+..+.|...++.+++..++.+.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988877777777665554211 124678888888776655555544
Q ss_pred hcc
Q 025282 239 MKP 241 (255)
Q Consensus 239 ~~p 241 (255)
..|
T Consensus 478 ~~~ 480 (500)
T PRK09584 478 TAP 480 (500)
T ss_pred HHH
Confidence 433
No 202
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.03 E-value=1e-08 Score=89.60 Aligned_cols=133 Identities=10% Similarity=-0.161 Sum_probs=94.8
Q ss_pred HHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHH-Hh-----hhHHHHHHHHHHHHhhhhhHhhhhHhhhh
Q 025282 107 SSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG-FS-----FSFWMIAICRMLVGVGEASFISLAAPFID 180 (255)
Q Consensus 107 ~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 180 (255)
..+..+...+..++.|+++||+|+|+++.++.+...+...... .. .+++.+.+..+...++.|........++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 4445677788899999999999999999988887776654322 22 24555555554444444444444555666
Q ss_pred hcCcc---------------------cchhHHHHHHHhhhhhhhhhhhhhhhhhc--cchhHHHHHHHHHHHHHHHHHHH
Q 025282 181 DNAPV---------------------AKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 181 ~~~~~---------------------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
+++|+ ++-|.+.|+.+....+|..+-|.+-+... ..++...|++..+..+++.++.+
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 66653 26778899999999999999887766655 56688889888888887777776
Q ss_pred Hh
Q 025282 238 VM 239 (255)
Q Consensus 238 ~~ 239 (255)
..
T Consensus 452 ~~ 453 (462)
T PRK15034 452 LV 453 (462)
T ss_pred HH
Confidence 55
No 203
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.01 E-value=5.5e-09 Score=92.26 Aligned_cols=125 Identities=10% Similarity=-0.016 Sum_probs=108.9
Q ss_pred cccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHH
Q 025282 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS----------FSFWMIAICRM 162 (255)
Q Consensus 93 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 162 (255)
.+..|.++.+.|.+.....++.+++....+++.+|++.|+++.++.++.+++.+..... ++.+.+....+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 35689999999999999999999999999999999999999999999998887554311 33445566778
Q ss_pred HHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cch
Q 025282 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN 217 (255)
Q Consensus 163 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~ 217 (255)
+.+++.+..+.....++.+..|++++|+..++.++..++|..+++.+++.+. ..|
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999998887 444
No 204
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.01 E-value=2e-08 Score=83.39 Aligned_cols=151 Identities=21% Similarity=0.167 Sum_probs=123.9
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc-cCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 168 (255)
|.+..|.|+|+.+.|++.+...+.....++....+.+| -.+|+..+....++.++.+.+.+.+....+.- -++.|+|.
T Consensus 232 P~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~ 310 (395)
T COG2807 232 PAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQ 310 (395)
T ss_pred HHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCcc
Confidence 68899999999999999999999999999999999996 45788888888888888888888764333322 48999999
Q ss_pred hhHhhhhHhhhhhcCc-ccchhHHHHHHHhhhhhhhhhhhhhhhhhc--cchhHHHHHHHHHHHHHHHHHHHHhcc
Q 025282 169 ASFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~f~~~~~~~~~~~~~~~~~~p 241 (255)
|..++....++.+..+ +++-+.-.++.|....+=..+||.+.|++. ..+|+......+...++..+.-+..-|
T Consensus 311 G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 311 GGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGR 386 (395)
T ss_pred chHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcch
Confidence 9999999999987765 345566666777777777788999999998 778999988888877777766665544
No 205
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.96 E-value=2.3e-08 Score=86.35 Aligned_cols=152 Identities=18% Similarity=0.221 Sum_probs=108.9
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccC-chHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN-PFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 168 (255)
+.+-++.|+|.+|+|.+.+...+..+++++++|.++||.+ +|+.+.+..++.++........++++.+++..++..+..
T Consensus 26 ~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~ 105 (400)
T PF03825_consen 26 PLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFF 105 (400)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 4666778899999999999999999999999999999986 677777777877777777778889998888888888888
Q ss_pred hhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhh-hhhhc-cc---hhHHHHHHHHHHHHHHHHHHHHhccCc
Q 025282 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVY-GGWVG-HY---NWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~-~~~l~-~~---~w~~~f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
....+...++..+... +++.-.|-.....++|.+++... +..+. .. +....+++.+...++.....+. .|+.
T Consensus 106 ~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~-lp~~ 182 (400)
T PF03825_consen 106 SPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALF-LPKT 182 (400)
T ss_pred ccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHh-CCCC
Confidence 8888888888888875 34444555556666676666433 22222 22 2234555555554444433333 3554
Q ss_pred c
Q 025282 244 L 244 (255)
Q Consensus 244 ~ 244 (255)
+
T Consensus 183 ~ 183 (400)
T PF03825_consen 183 P 183 (400)
T ss_pred c
Confidence 4
No 206
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.94 E-value=1.6e-08 Score=92.07 Aligned_cols=150 Identities=16% Similarity=0.137 Sum_probs=123.4
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc-cCchHHHHHHHHHHHHHHHHHHHhhh--------HHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSFS--------FWMIAIC 160 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 160 (255)
.++.+.+|++.+.+..+...+....-+.+++.|+++|+ +|+++.+.++.++..++.++.++... ....+++
T Consensus 12 lYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~g 91 (654)
T TIGR00926 12 LYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLG 91 (654)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHH
Confidence 36677788888888888888888888999999999996 89999999999999999988876421 2345677
Q ss_pred HHHHHhhhhhHhhhhHhhhhhcCccc---chhHHHHHHHhhhhhhhhhhhhhhhhhc-cc-------hhHHHHHHHHHHH
Q 025282 161 RMLVGVGEASFISLAAPFIDDNAPVA---KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY-------NWRYAFWGEAILM 229 (255)
Q Consensus 161 ~~l~G~~~g~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~-------~w~~~f~~~~~~~ 229 (255)
-.+..+|.|++-++..+...|.++++ +|-..+.++..+.++|+.+++++.+++. .. +|...|.+.++.+
T Consensus 92 LaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m 171 (654)
T TIGR00926 92 LALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILM 171 (654)
T ss_pred HHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHH
Confidence 78888999999999999999999754 3677888999999999999998888875 32 6999999998888
Q ss_pred HHHHHHHHHh
Q 025282 230 FPFAVLGFVM 239 (255)
Q Consensus 230 ~~~~~~~~~~ 239 (255)
++..+.....
T Consensus 172 ~ia~lvf~~g 181 (654)
T TIGR00926 172 ILALIVFMAG 181 (654)
T ss_pred HHHHHHHHHh
Confidence 7776665443
No 207
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.91 E-value=6e-09 Score=89.23 Aligned_cols=151 Identities=17% Similarity=0.189 Sum_probs=94.0
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHH--HHH-HHHHHh----hhHH-HHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWT--LAV-VGCGFS----FSFW-MIAICRM 162 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~--~~~-~~~~~~----~~~~-~~~~~~~ 162 (255)
.++++.|++.++.|.+.++..+...+.+++.|.++||+|.||-++..+.+.. .+. +...+. .|.+ ..+++-+
T Consensus 33 WL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i 112 (412)
T PF01306_consen 33 WLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGI 112 (412)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTT
T ss_pred HHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445689999999999999999999999999999999996665443332222 122 222222 2322 2223333
Q ss_pred HHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhccC
Q 025282 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (255)
Q Consensus 163 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~~p~ 242 (255)
..|++.....++.-+++.++. ++.+.-.|-..+.+++|.+++..++|.+...+-+..|++....+++..++.++.+|+
T Consensus 113 ~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~ 190 (412)
T PF01306_consen 113 YLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPD 190 (412)
T ss_dssp TTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---
T ss_pred HHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 344444455555555555553 445566677778888999999999998875566778887776666666555555554
Q ss_pred c
Q 025282 243 Q 243 (255)
Q Consensus 243 ~ 243 (255)
.
T Consensus 191 ~ 191 (412)
T PF01306_consen 191 V 191 (412)
T ss_dssp S
T ss_pred C
Confidence 3
No 208
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.91 E-value=1.4e-07 Score=81.38 Aligned_cols=129 Identities=9% Similarity=0.038 Sum_probs=97.4
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHH-HHHHHHHH--hhhHHHHHHHHHHHHhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWT-LAVVGCGF--SFSFWMIAICRMLVGVG 167 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~l~G~~ 167 (255)
.+++.+|.+..+.+++.....++..++..+.+++.||++++........... +....... ..+.+.+.+..++.|++
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 312 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFG 312 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 4555689999999999999999999999999999999984433322222222 22222222 23566777788999999
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHH
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRY 220 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~ 220 (255)
.+...+....+..|.+| ++++.+.++.+....+|..+++.+++.+. ...+..
T Consensus 313 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 365 (394)
T PRK11652 313 AGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFSL 365 (394)
T ss_pred HHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHHH
Confidence 99999999999999987 67899999999999999999999998886 444443
No 209
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.90 E-value=1.5e-07 Score=79.79 Aligned_cols=148 Identities=18% Similarity=0.165 Sum_probs=124.0
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc-ccCchHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR-SVNPFRLIGVGLTVWTLAVVGCGF---SFSFWMIAICRMLVG 165 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~G~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~G 165 (255)
|+=.+.||++..+...++.....|..++....|++.. |.++++...+++....++..+..+ ..+.+.+...-++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 5556789999999999999999999999999998888 688888888888888877766444 457889999999999
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-----------cchhHHHHHHHHHHHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-----------HYNWRYAFWGEAILMFPFAV 234 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-----------~~~w~~~f~~~~~~~~~~~~ 234 (255)
++.|.+.....+...+...+++.|..+|.++....++..++..+++.+. ..+|...|.+.++..++...
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998888888888663 13577778777776655544
Q ss_pred HHH
Q 025282 235 LGF 237 (255)
Q Consensus 235 ~~~ 237 (255)
+..
T Consensus 393 ll~ 395 (403)
T PF03209_consen 393 LLG 395 (403)
T ss_pred HHH
Confidence 443
No 210
>PRK11462 putative transporter; Provisional
Probab=98.90 E-value=4.2e-08 Score=86.52 Aligned_cols=154 Identities=10% Similarity=-0.042 Sum_probs=116.3
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc----cCchHHH-HHHHHHHHHHHHHHHHhhh------HHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS----VNPFRLI-GVGLTVWTLAVVGCGFSFS------FWMIA 158 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r~~~-~~~~~~~~~~~~~~~~~~~------~~~~~ 158 (255)
.++.+..|+++..+|.+..+.-+--++.-++.|+++|| +||||.. +++.+..+++.+++...++ ...+.
T Consensus 34 ~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~ 113 (460)
T PRK11462 34 FFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAA 113 (460)
T ss_pred HHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 36677889999999999999999999999999999996 7876554 4666777777766554432 44566
Q ss_pred HHHHHHHhhhhhHhhhhHhhhhhcCc-ccchhHHHHHHHhhhhhhhhhhhhhhhhhc--------cchhHHHHHHHHHHH
Q 025282 159 ICRMLVGVGEASFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--------HYNWRYAFWGEAILM 229 (255)
Q Consensus 159 ~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--------~~~w~~~f~~~~~~~ 229 (255)
+.-++..++.......-.++..|+.+ +++|.+..++...+..+|..+++.+...+. ..+|+....+.+++.
T Consensus 114 ~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~ 193 (460)
T PRK11462 114 ITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVA 193 (460)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 66777788888888888899999987 689999999999998888877766644332 136888777777776
Q ss_pred HHHHHHHHHhccCc
Q 025282 230 FPFAVLGFVMKPLQ 243 (255)
Q Consensus 230 ~~~~~~~~~~~p~~ 243 (255)
+++.++.+...+|.
T Consensus 194 ~i~~~i~~~~~kE~ 207 (460)
T PRK11462 194 FMMLAFCFFTTKER 207 (460)
T ss_pred HHHHHHHHhcceec
Confidence 66655554444443
No 211
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.87 E-value=1.4e-08 Score=85.20 Aligned_cols=148 Identities=14% Similarity=0.119 Sum_probs=123.0
Q ss_pred ccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccC--chHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 025282 92 IQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN--PFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 92 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 169 (255)
+.|.+..+..+.|+..--..+.+.++..+.|.++||++ |......+++..++......+++++..+++-++..|++.+
T Consensus 297 m~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~ 376 (464)
T KOG3764|consen 297 MLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIG 376 (464)
T ss_pred HHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHH
Confidence 45667766668888888888999999999999999999 6555566677777777778889999999999999999888
Q ss_pred hHhhhhHhhhhhcCccc------chhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 170 SFISLAAPFIDDNAPVA------KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
...+.......+..+.+ ..|...++....+.+|..+||.++|.+. ..|++|...+.++..++-.-+..++
T Consensus 377 ~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 377 LADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777776666666543 4578889999999999999999999999 9999999999999888777665554
No 212
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.87 E-value=8.4e-08 Score=83.37 Aligned_cols=128 Identities=11% Similarity=-0.031 Sum_probs=98.9
Q ss_pred cCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhH
Q 025282 97 DLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAA 176 (255)
Q Consensus 97 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~ 176 (255)
+.+....+...+.+..+..++.++.+++.||+++|+++.+...+.++..++..+.++... ...-++.|++.+..+|...
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~ 343 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIY 343 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHH
Confidence 444444455666777888999999999999999999999998888888888888776544 5667788899999999999
Q ss_pred hhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cc------hhHHHHHHHHH
Q 025282 177 PFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY------NWRYAFWGEAI 227 (255)
Q Consensus 177 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~------~w~~~f~~~~~ 227 (255)
++..+..+++.+..+.++... .+|..+.|++.|++. .. +.+..|++..+
T Consensus 344 sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~ 399 (410)
T TIGR00885 344 GIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLL 399 (410)
T ss_pred HHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHH
Confidence 999999986654334444333 389999999999988 43 57777776544
No 213
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.86 E-value=6.5e-09 Score=68.57 Aligned_cols=73 Identities=30% Similarity=0.386 Sum_probs=68.7
Q ss_pred CCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 025282 85 TCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMI 157 (255)
Q Consensus 85 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
|+|.+|.+++|.++|.++.+++.+.+.+|+.+|.+...++.++..+++.+..+++...+..+.+++.++.+.+
T Consensus 11 yTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 11 YTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 5688999999999999999999999999999999999999999999999999999999999999999887654
No 214
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.84 E-value=1.2e-11 Score=108.40 Aligned_cols=156 Identities=12% Similarity=0.024 Sum_probs=105.7
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHH--H--hhhH-----HHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG--F--SFSF-----WMIAIC 160 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~--~--~~~~-----~~~~~~ 160 (255)
+.+.+..+.+.. -+......+...++.++..++.||+|||+.++.+.++.++..+..+ . ..+. ...++.
T Consensus 277 ~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 354 (451)
T PF00083_consen 277 PSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVF 354 (451)
T ss_pred cccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccee
Confidence 466666676655 2223344455566777778999999999999999988888777664 1 1111 111122
Q ss_pred HHHHHhhhh-hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHH
Q 025282 161 RMLVGVGEA-SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFV 238 (255)
Q Consensus 161 ~~l~G~~~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~ 238 (255)
-.+...+.+ ...+....+..|.+|++.|+++.++......++..+++.+...+. ..+-...+.+.++++++..+..++
T Consensus 355 ~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~ 434 (451)
T PF00083_consen 355 LALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYF 434 (451)
T ss_pred eeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeE
Confidence 222222222 334566688899999999999999999999999999888877766 444345666666777777777777
Q ss_pred hccCccccc
Q 025282 239 MKPLQLKGA 247 (255)
Q Consensus 239 ~~p~~~~~~ 247 (255)
+.||+.+..
T Consensus 435 ~lpET~g~~ 443 (451)
T PF00083_consen 435 FLPETKGKT 443 (451)
T ss_pred EEeeCCCCC
Confidence 789886543
No 215
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.84 E-value=4.7e-08 Score=86.78 Aligned_cols=141 Identities=18% Similarity=0.272 Sum_probs=109.8
Q ss_pred hHHHHHHHHHHHHhHhhHHHhhhcccCchHH-------HHHHHHHHHHHHHHHH-----Hh-----hhHHHHHHHHHHHH
Q 025282 103 DGVLSSAFMVGLLVASPIFASLARSVNPFRL-------IGVGLTVWTLAVVGCG-----FS-----FSFWMIAICRMLVG 165 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~-------~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~l~G 165 (255)
.+++.+.+.+..++..++.+++.||+++|+. +.+|+++.+++.+..+ +. .++++++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 4566777777788889999999999998863 6677777776664321 21 35778888899999
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-----------cchhHHHHHHHHHHHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-----------HYNWRYAFWGEAILMFPFAV 234 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-----------~~~w~~~f~~~~~~~~~~~~ 234 (255)
+|.+...+...+++.+..|++.+|.+++++.....+|..+|..++.... .....+.|...++.+++..+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988876552 11356777777777776666
Q ss_pred HHHHhccCc
Q 025282 235 LGFVMKPLQ 243 (255)
Q Consensus 235 ~~~~~~p~~ 243 (255)
+.+...|.-
T Consensus 471 ~~~~~~~~~ 479 (489)
T PRK10207 471 VMALMVPWL 479 (489)
T ss_pred HHHHHHHHH
Confidence 665554433
No 216
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.81 E-value=2e-08 Score=85.51 Aligned_cols=111 Identities=10% Similarity=-0.038 Sum_probs=86.4
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH--hh--hHHHHHHHHHHHHh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF--SF--SFWMIAICRMLVGV 166 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~l~G~ 166 (255)
++++.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+......+..+..+ .. +.+.+.+...+.++
T Consensus 251 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (366)
T TIGR00886 251 FFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFF 330 (366)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHH
Confidence 556778999999999999999999999999999999999998887777666665554443 22 55555555566666
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhh
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSG 202 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 202 (255)
+.|...+...+++.+..| +++|.+.|+.+...++|
T Consensus 331 ~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 331 FSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred Hhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 666666667777888887 79999999998887776
No 217
>PRK09848 glucuronide transporter; Provisional
Probab=98.81 E-value=1.3e-07 Score=83.01 Aligned_cols=124 Identities=11% Similarity=-0.050 Sum_probs=85.3
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhccc----CchHHH-HHHHHHHHHHHHHH-HH----hh--hHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV----NPFRLI-GVGLTVWTLAVVGC-GF----SF--SFWMI 157 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----G~r~~~-~~~~~~~~~~~~~~-~~----~~--~~~~~ 157 (255)
.++++.+|++..+.|.+..+..+..++..++.|+++||. |||+.. .++.+...+..++. .. .. ....+
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 477888999999999999999999999999999999996 777755 45555444433332 21 11 23334
Q ss_pred HHHHHHHHhhhhhHhhhhHhhhhhcCc-ccchhHHHHHHHhhh-----hhhhhhhhhhhhhh
Q 025282 158 AICRMLVGVGEASFISLAAPFIDDNAP-VAKKTAWLGVFYMCL-----PSGYAIGYVYGGWV 213 (255)
Q Consensus 158 ~~~~~l~G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~-----~~g~~~g~~~~~~l 213 (255)
+...++.+++.+...+...++..+... +++|.+..++-..+. .++..++|.+.+..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 455667788888888777777776664 467888766655432 34555566665543
No 218
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.77 E-value=2.4e-07 Score=81.18 Aligned_cols=131 Identities=17% Similarity=0.257 Sum_probs=109.4
Q ss_pred HHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh--hhhHhhhhHhhhhhcCcccch
Q 025282 111 MVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG--EASFISLAAPFIDDNAPVAKK 188 (255)
Q Consensus 111 ~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~--~g~~~~~~~~~~~~~~~~~~r 188 (255)
.+...+..+..|.++||+|||..+.+..+...+..+...+.. +| +++ +.|+. .+.......++++|....++|
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~-~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R 146 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YW-FFL---LLGLSGGFSAIFSVGFAYVADISSEEER 146 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HH-Hhh---hcccccchhhhhhhhhhheeeccchhHH
Confidence 667789999999999999999999999998888887777666 33 333 44432 344567788899999999999
Q ss_pred hHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhccCcccc
Q 025282 189 TAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKG 246 (255)
Q Consensus 189 ~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~ 246 (255)
....|+.......+..++|.+++.+. ..|.-.+|.+..+..++..+..+++.||+...
T Consensus 147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~ 205 (463)
T KOG2816|consen 147 SSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE 205 (463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc
Confidence 99999999999999999999999998 88999999999998888888887778876543
No 219
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.77 E-value=6.9e-10 Score=89.09 Aligned_cols=124 Identities=13% Similarity=0.044 Sum_probs=107.2
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc-cCchHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGF---SFSFWMIAICRMLVGV 166 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~G~ 166 (255)
+.+.+.++..++.-++.++|..-.++-+++.|++.|| +|.|+..++-+....++-++++. .+.+|.+.++|++.|+
T Consensus 69 ~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGI 148 (459)
T KOG4686|consen 69 DFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGI 148 (459)
T ss_pred hhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeecc
Confidence 5566667778888999999999999999999999996 78888877777777777776654 6799999999999999
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
|.-........++.-|+..|+.+.++|+..+...+|..+.-.+.+++.
T Consensus 149 GgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly 196 (459)
T KOG4686|consen 149 GGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLY 196 (459)
T ss_pred CchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHH
Confidence 988888889999999999999999999999999999887766666654
No 220
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.75 E-value=8.8e-08 Score=83.74 Aligned_cols=154 Identities=14% Similarity=0.082 Sum_probs=122.1
Q ss_pred CcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhccc-----CchHHHHHHHHHHHHHHHHHHHh----hhHHHHH
Q 025282 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV-----NPFRLIGVGLTVWTLAVVGCGFS----FSFWMIA 158 (255)
Q Consensus 88 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----G~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 158 (255)
..+.+++++|+++.+...+.+...+.. ...++.|.++|-+ .||+.++++.++..++.+.++.. .+.....
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~ 90 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV 90 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence 336889999999999888888777766 5678999999985 36666777777776666655553 3566677
Q ss_pred HHHHHHHhhhhhHhhhhHhhhhhcCcc--cchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHH
Q 025282 159 ICRMLVGVGEASFISLAAPFIDDNAPV--AKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVL 235 (255)
Q Consensus 159 ~~~~l~G~~~g~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~ 235 (255)
+.-++..+|......+.-+++.|.... +.||...+.......+|.+++..++|.+. ..+++..|.+.+.+..+..+.
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIV 170 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHH
Confidence 777888899999999999999998843 34788888888899999999999999888 888999999988877776666
Q ss_pred HHHhccC
Q 025282 236 GFVMKPL 242 (255)
Q Consensus 236 ~~~~~p~ 242 (255)
.+++.+|
T Consensus 171 ~~~~~~e 177 (433)
T PF03092_consen 171 ALFLLEE 177 (433)
T ss_pred HHHhhhh
Confidence 6666554
No 221
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.73 E-value=2.4e-07 Score=78.10 Aligned_cols=140 Identities=16% Similarity=0.141 Sum_probs=113.4
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
++.+..|+++.+.+...+.+..+.++|.+...++..|+...+.+.+..++..+.++..++.++... +.+-++.|+..+.
T Consensus 262 y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~-~~~l~~ig~F~si 340 (422)
T COG0738 262 YLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVA-LYALFLIGLFNSI 340 (422)
T ss_pred HHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHH-HHHHHHHHHHhHH
Confidence 444458899999999999999999999999999999999999999999988888888888888444 4456788999999
Q ss_pred HhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHH
Q 025282 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFA 233 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~ 233 (255)
.+|...+...+..| +.....+..-.+..+|+++-|++.|++. ..|-...+.....+|.+..
T Consensus 341 mfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 341 MFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 99999999999998 3334444445556779999999999998 8888877775555544433
No 222
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.70 E-value=8.2e-07 Score=77.15 Aligned_cols=121 Identities=17% Similarity=0.214 Sum_probs=99.8
Q ss_pred cccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhhhhh
Q 025282 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--SFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 93 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~g~ 170 (255)
+--.|.++....+.......+.+++.+++.++.+|+|+|+++.++.++.+++.++..+.+ +.+.+++..++.+++.+.
T Consensus 264 ~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~ 343 (467)
T COG2211 264 TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGI 343 (467)
T ss_pred EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhc
Confidence 334566666677778888888888899999999999999999999999999999888876 788888899999999999
Q ss_pred HhhhhHhhhhhcCcc-------cchhHHHHHHHhhhhhhhhhhhhhhhhh
Q 025282 171 FISLAAPFIDDNAPV-------AKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (255)
..+...++++|..+- ++-|...+....+.-+|..++..+.++.
T Consensus 344 ~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 344 ANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred cccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887753 2336777777777778888877666655
No 223
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.68 E-value=7.1e-07 Score=79.88 Aligned_cols=156 Identities=10% Similarity=-0.051 Sum_probs=102.2
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhH-------------HH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSF-------------WM 156 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 156 (255)
+.+-+.-+.+... .+...+..+...++..+..++.||+|||+.++.+...+.++.++++..... ..
T Consensus 319 ~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (513)
T KOG0254|consen 319 TTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLA 397 (513)
T ss_pred HHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHH
Confidence 3555555655443 555666777777888888999999999999999999999999887764221 12
Q ss_pred HHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHH-
Q 025282 157 IAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAV- 234 (255)
Q Consensus 157 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~- 234 (255)
+....+..........++...+.+|.+|.+.|+++.++......+...+-......+. ..++...|...+..+.+...
T Consensus 398 ~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~ 477 (513)
T KOG0254|consen 398 IVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLII 477 (513)
T ss_pred HHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 2222222333333344556678899999999999999887776665544322222222 22245667777766666666
Q ss_pred HHHHhccCcccc
Q 025282 235 LGFVMKPLQLKG 246 (255)
Q Consensus 235 ~~~~~~p~~~~~ 246 (255)
.++++.||+...
T Consensus 478 fv~~~~pETkg~ 489 (513)
T KOG0254|consen 478 FVFFFVPETKGL 489 (513)
T ss_pred HheEEcccCCCC
Confidence 566677887643
No 224
>PRK11462 putative transporter; Provisional
Probab=98.68 E-value=1.1e-06 Score=77.67 Aligned_cols=114 Identities=13% Similarity=0.091 Sum_probs=78.7
Q ss_pred chhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhhhhhHhhhhHhh
Q 025282 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--SFWMIAICRMLVGVGEASFISLAAPF 178 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~ 178 (255)
...+.+...+.++.+++.+++++++||+|+|+.+..+..+.++..++..+.+ +...+++.-++.|++.+...+...++
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m 342 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677788888899999999999999999987765554444333333322 23344455567788877777777778
Q ss_pred hhhcCc-------ccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 179 IDDNAP-------VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 179 ~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
++|..+ .++-|...+.......+|..+++.+++.+.
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766 233355567777788888888887777654
No 225
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.66 E-value=2.2e-07 Score=69.23 Aligned_cols=114 Identities=11% Similarity=0.156 Sum_probs=92.9
Q ss_pred CCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHh
Q 025282 98 LNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAP 177 (255)
Q Consensus 98 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~ 177 (255)
+++..--.-.++......+++++.+.+.+++|.|+.++++.+...+-.... +-++.+.++.+-++.|++.+..++....
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ 112 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGT 112 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhH
Confidence 333333444566777778888899999999999999999999988655443 5677889999999999999999999999
Q ss_pred hhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhh
Q 025282 178 FIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGW 212 (255)
Q Consensus 178 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 212 (255)
++.+..++++|++..+++......+.++|.++.-.
T Consensus 113 ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 113 YLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888877777777655443
No 226
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.65 E-value=7.5e-08 Score=84.53 Aligned_cols=145 Identities=13% Similarity=0.110 Sum_probs=104.0
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCc---------hHHHHHHHHHHHHHHHHHHHhhh--H-H--
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNP---------FRLIGVGLTVWTLAVVGCGFSFS--F-W-- 155 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~---------r~~~~~~~~~~~~~~~~~~~~~~--~-~-- 155 (255)
.++++.+|.+..+.|++.++..+...+..+++|+++||.-+ |..=.++....+++.+..++.++ . .
T Consensus 283 tY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~ 362 (466)
T KOG2532|consen 283 TYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAV 362 (466)
T ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHH
Confidence 57788899999999999999999999999999999998744 33334555555666666666552 2 1
Q ss_pred -HHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c---chhHHHHHHHHHHHH
Q 025282 156 -MIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H---YNWRYAFWGEAILMF 230 (255)
Q Consensus 156 -~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~---~~w~~~f~~~~~~~~ 230 (255)
.+.++..+.|+..++. ..-..+.. +++-+..+|+.+....+...++|.+.+.+. + ..||+.|++.+++.+
T Consensus 363 ~~l~~~~~~~g~~~~Gf----~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~ 437 (466)
T KOG2532|consen 363 ILLTIAIGLSGFNISGF----YKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILI 437 (466)
T ss_pred HHHHHHHHHcccchhhh----Hhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHH
Confidence 1112222222222222 22222324 488999999999999999999999999887 4 389999999999888
Q ss_pred HHHHHHHHh
Q 025282 231 PFAVLGFVM 239 (255)
Q Consensus 231 ~~~~~~~~~ 239 (255)
+..++..++
T Consensus 438 ~~~i~f~~f 446 (466)
T KOG2532|consen 438 VGNIIFLFF 446 (466)
T ss_pred HhchheeEe
Confidence 777665555
No 227
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.63 E-value=3.6e-07 Score=76.42 Aligned_cols=91 Identities=11% Similarity=0.104 Sum_probs=78.3
Q ss_pred HHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-c------------
Q 025282 149 GFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H------------ 215 (255)
Q Consensus 149 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~------------ 215 (255)
...++++.++++-++.|.|.+..++..+.++++..++|++.+.+++.+.++++|..++|.+++.+. .
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 345789999999999999999999999999999999999999999999999999999999999776 2
Q ss_pred ----chhHHHHHHHHHHHHHHHHHHHHh
Q 025282 216 ----YNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 216 ----~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
..|+++|++.+.+.++..+++.+.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~ 112 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFL 112 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 379999997777655555544433
No 228
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.58 E-value=2.1e-06 Score=75.60 Aligned_cols=140 Identities=16% Similarity=0.037 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHhHhhHHHhhhcccC-chHHHHHHHHHHHHHHHHHHHhhh---------------------HHHHHHHHH
Q 025282 105 VLSSAFMVGLLVASPIFASLARSVN-PFRLIGVGLTVWTLAVVGCGFSFS---------------------FWMIAICRM 162 (255)
Q Consensus 105 ~~~~~~~~~~~~~~~~~g~l~dr~G-~r~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~ 162 (255)
+....+.+...+.+++.-++.+|+| ||++..++.++.+++.....+.++ .+..++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 4444555555677788889999999 477778998888888877776543 367778889
Q ss_pred HHHhhhhhHhhhhHhhhhhcCcc--cchhHHHHHHHhhhhhhhhhhhhhhhhhc---cchhHHHHHHHHHHHHHHHHHHH
Q 025282 163 LVGVGEASFISLAAPFIDDNAPV--AKKTAWLGVFYMCLPSGYAIGYVYGGWVG---HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 163 l~G~~~g~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
+.|+..+.....-++++++..++ ++.|..+|+++.+..+.+++..+..|.+. ..+-.+.+.+.++..++.+++.+
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999995 45599999999999999999887777644 33456788889999999999988
Q ss_pred HhccCcc
Q 025282 238 VMKPLQL 244 (255)
Q Consensus 238 ~~~p~~~ 244 (255)
+..|+.+
T Consensus 469 ~~~~~~~ 475 (477)
T TIGR01301 469 ILLPRPR 475 (477)
T ss_pred HhCCCCC
Confidence 8888754
No 229
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.58 E-value=4.6e-06 Score=72.62 Aligned_cols=144 Identities=13% Similarity=0.051 Sum_probs=94.5
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF-----SFSFWMIAICRMLVG 165 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G 165 (255)
.+++.+|.++.+.++.......+..++..+.+++.++..+++.+.....+..++.++... .++++..++..++.+
T Consensus 244 ~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~ 323 (413)
T PRK15403 244 ILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYA 323 (413)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 455667999999999988888888888888888765544444433322232333222221 234444567888889
Q ss_pred hhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 025282 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVL 235 (255)
Q Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~ 235 (255)
+|.+...+......-+- ....+|++.++.+.....+..+++..++++...+-++.|...+++..+....
T Consensus 324 ~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (413)
T PRK15403 324 FGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGVIVVF 392 (413)
T ss_pred HHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 99888887777543221 2235799999998888888888888888876335566666665554444333
No 230
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.56 E-value=5.7e-06 Score=70.27 Aligned_cols=123 Identities=11% Similarity=0.078 Sum_probs=97.5
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccC-----chHHHH-HHHHHHHHHHHHHHHh-----h-------
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN-----PFRLIG-VGLTVWTLAVVGCGFS-----F------- 152 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G-----~r~~~~-~~~~~~~~~~~~~~~~-----~------- 152 (255)
.+..|++++..-.+.+.+...+.. ...+.+|+.+|+.+ ||..++ .|....+.+..+..++ .
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 566789999888888888877766 57999999999988 776665 4455555555544432 2
Q ss_pred h----HHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 153 S----FWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 153 ~----~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
+ ......+..+.|+|.+...+...+++.|..|+|+|+++.++...+..+|.+++..+.+.+.
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL 149 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLL 149 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1 1233455678899999999999999999999999999999999999999999999988776
No 231
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.50 E-value=2.1e-05 Score=67.49 Aligned_cols=149 Identities=9% Similarity=-0.010 Sum_probs=119.7
Q ss_pred cccccc-ccCCcchhH-HHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 90 TGIQGD-FDLNNFQDG-VLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 90 ~~~~~~-~~~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
|++.+. .|++.+|.. -+.-...-.+....++...+.|..+.|++++++.+...+...+.-+.++...+-+..++.|++
T Consensus 28 ~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~ 107 (412)
T PF01770_consen 28 PYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLA 107 (412)
T ss_pred HHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHH
Confidence 677765 888887763 444455566778888999999999999999999999999999999999999999999999998
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc---cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG---HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
.+. ..+-.+++--..|+++-.++.+.......+|..++.++|..+. ...++....+......+..++.+++
T Consensus 108 ~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 108 TAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 776 4667788888889999999999999999999999999988776 4556666656555444444444444
No 232
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.49 E-value=1.5e-07 Score=80.49 Aligned_cols=133 Identities=10% Similarity=-0.027 Sum_probs=96.5
Q ss_pred HHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHh-hhhhHhhhhHhhhhhcCccc
Q 025282 112 VGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS----FWMIAICRMLVGV-GEASFISLAAPFIDDNAPVA 186 (255)
Q Consensus 112 ~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~G~-~~g~~~~~~~~~~~~~~~~~ 186 (255)
++++.+-.+...+.|+.|||+..+.+.+++++..+..+..-| -..+++...+..+ +.-+.......+.+|.+|.+
T Consensus 359 ~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPar 438 (538)
T KOG0252|consen 359 CSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPAR 438 (538)
T ss_pred HccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHH
Confidence 344456677889999999999999999999999988887655 1122222222222 11222233344569999999
Q ss_pred chhHHHHHHHhhhhhhhhhhhhhhhhhc------cchhHHHHHHHHHHHHHHHHHHHHhccCccc
Q 025282 187 KKTAWLGVFYMCLPSGYAIGYVYGGWVG------HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 187 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~------~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
.|++.-|+...+.-+|.++|...-..+. ..+.|+.|++.+.++++..+..+++ ||+.+
T Consensus 439 vR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk~ 502 (538)
T KOG0252|consen 439 VRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETKG 502 (538)
T ss_pred HhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe-ecccc
Confidence 9999999999999999999987777665 3578999999999887766665544 66643
No 233
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.49 E-value=4.8e-06 Score=72.44 Aligned_cols=154 Identities=10% Similarity=0.007 Sum_probs=121.0
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc----cCc-hHHHHHHHHHHHHHHHHHHHhh------hHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS----VNP-FRLIGVGLTVWTLAVVGCGFSF------SFWMIAI 159 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~-r~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 159 (255)
++.+.+|+++..+|.+..+.-+--++.-++.|.+.|| +|| |+.++++.+..++.+.++-.++ +....++
T Consensus 38 fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v 117 (467)
T COG2211 38 FYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV 117 (467)
T ss_pred HHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH
Confidence 6678889999999999999999999999999999996 786 4556677788888888887766 3556677
Q ss_pred HHHHHHhhhhhHhhhhHhhhhhcCc-ccchhHHHHHHHhhhhhhhhhhhhhhh----hhc----cchhHHHHHHHHHHHH
Q 025282 160 CRMLVGVGEASFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYGG----WVG----HYNWRYAFWGEAILMF 230 (255)
Q Consensus 160 ~~~l~G~~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~----~l~----~~~w~~~f~~~~~~~~ 230 (255)
...+.+++.......-.++..|+.+ ++||.+..+.-+.+..+|..+...+.. .+. ..||+.+..+.+++.+
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~ 197 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV 197 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence 7888999999988888888888875 579999999999998888665544433 222 3488888888888877
Q ss_pred HHHHHHHHhccCcc
Q 025282 231 PFAVLGFVMKPLQL 244 (255)
Q Consensus 231 ~~~~~~~~~~p~~~ 244 (255)
+..+..++-.+|+.
T Consensus 198 i~~l~~~~~v~ER~ 211 (467)
T COG2211 198 ILLLFCFFNVKERV 211 (467)
T ss_pred HHHHHHHHHhhccc
Confidence 77777666655554
No 234
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.48 E-value=9.4e-06 Score=71.77 Aligned_cols=144 Identities=14% Similarity=0.054 Sum_probs=108.0
Q ss_pred hhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHH-HHHHHHHHHHHHHh-h-hHHHHHHHHHHHHhhhhhHhhhhHhh
Q 025282 102 QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVG-LTVWTLAVVGCGFS-F-SFWMIAICRMLVGVGEASFISLAAPF 178 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~-~~~~~~~~~~~~~~-~-~~~~~~~~~~l~G~~~g~~~~~~~~~ 178 (255)
..++..++..+..++..++.|.++|+-|+||.++.. ..+..+.+.++.+. + +++...+..++.-++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346778889999999999999999998876666554 44445566666664 3 44444555556667888888889999
Q ss_pred hhhcCcccch--------------------------hHHHHHHHhhhhhhhhhhhhhhhhhc--c-------chhHHHHH
Q 025282 179 IDDNAPVAKK--------------------------TAWLGVFYMCLPSGYAIGYVYGGWVG--H-------YNWRYAFW 223 (255)
Q Consensus 179 ~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~--~-------~~w~~~f~ 223 (255)
+.|..+++++ ++..+.-....++|.++.-.+.-.+. . .+-|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999999888 88888888888888887666554442 1 23588899
Q ss_pred HHHHHHHHHHHHHHHhccCccc
Q 025282 224 GEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 224 ~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
+.++.-++..+..+++.|+.++
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCC
Confidence 9998888888888887777654
No 235
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.35 E-value=3.4e-05 Score=67.80 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=110.2
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHH-hhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFA-SLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 169 (255)
+++..++++.++.+.+.+.......+++.+.. .+...+|-|+.+..|++.-.+.....+++++.|+++....+.++. +
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~ 345 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-G 345 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-c
Confidence 67788999999999999988888888888777 777889999999999999999999999999999999998887774 6
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
...+...++++.+.+++++|+++++....-.+..+++|.+-+.+.
T Consensus 346 ~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 667888999999999999999999999999999999998877664
No 236
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.34 E-value=4.5e-06 Score=70.07 Aligned_cols=135 Identities=15% Similarity=0.140 Sum_probs=117.1
Q ss_pred cccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccC--chHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN--PFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 93 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
.+.+|.++.|.|.+.+...+...+.+....+..||.. -+-.+..++.++.-..++.+.++....++.+..+-.+..+.
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHH
Confidence 4779999999999999999999999999999999987 77888888888888888888899889999999999999899
Q ss_pred HhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc--cchhHHHHHHHHH
Q 025282 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAI 227 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~f~~~~~ 227 (255)
.-+....++....|.++||..+|+..+...++-++||+++|.+. ..+-+.++...+.
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~ 427 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGA 427 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHH
Confidence 98999999999999999999999999999999999999998775 3344444444433
No 237
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.27 E-value=1.8e-05 Score=71.16 Aligned_cols=110 Identities=16% Similarity=0.045 Sum_probs=88.3
Q ss_pred hhHHHHHHHHHHHHhHhhHHHhhhcccCc-hHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHhhhhhHhhhhHhh
Q 025282 102 QDGVLSSAFMVGLLVASPIFASLARSVNP-FRLIGVGLTVWTLAVVGCGFS--FSFWMIAICRMLVGVGEASFISLAAPF 178 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~ 178 (255)
..++....+.++..+++.+.|.+..+++| |+.++++..++.+++.+++.. +|....++..++.|++.|.........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 56788888999999999999999988876 555567776766654444443 355666778889999999998888888
Q ss_pred hhhcCcccchhHHHHHHHhhhhhhhhhhhhhhh
Q 025282 179 IDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGG 211 (255)
Q Consensus 179 ~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 211 (255)
+.-..|.++-+.+.++..+...+|+.+|..+..
T Consensus 430 ~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 430 AQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred eEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 888889999999999999999999888877653
No 238
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.22 E-value=4.6e-05 Score=68.32 Aligned_cols=140 Identities=11% Similarity=-0.045 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHH---HHHHHHHHHHhhhhhHhhhhHhhhh
Q 025282 104 GVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFW---MIAICRMLVGVGEASFISLAAPFID 180 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~G~~~g~~~~~~~~~~~ 180 (255)
.............+....+.+.|++|||.....+.++..++.+..++..... ...+...+...+.+..+.....+.+
T Consensus 353 ~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (521)
T KOG0255|consen 353 YLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSA 432 (521)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445566667778999999999999999999999999999876433 3556666666777777777799999
Q ss_pred hcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhcc--chhHHHHHHHHHHHHHHHHHHHHhccCccc
Q 025282 181 DNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGH--YNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (255)
Q Consensus 181 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--~~w~~~f~~~~~~~~~~~~~~~~~~p~~~~ 245 (255)
|++|+..|..+.+.......+|.+++|.+...... ..+... +.+....+..++..++.||+..
T Consensus 433 el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 433 ELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLI--LFGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHH--HHHHHHHHHHHHHHhcCcccCC
Confidence 99999999999999999999999999988765542 222222 2355555555555566677643
No 239
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.21 E-value=1.2e-05 Score=69.07 Aligned_cols=108 Identities=20% Similarity=0.252 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCccc---chhHHHHHHHhhh
Q 025282 132 RLIGVGLTVWTLAVVGCGFSF---------SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVA---KKTAWLGVFYMCL 199 (255)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~ 199 (255)
|.+.++.++..+|.++..++. +.+.++++..+.++|.|+.-++..++.+|.++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888899999988855542 2367889999999999999999999999999875 5778888999999
Q ss_pred hhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 200 PSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 200 ~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
++|..+++.+.+++. +.+|.+.|.+.++..++..+..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 999999999999998 9999999999998877666554443
No 240
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.19 E-value=1.4e-05 Score=68.55 Aligned_cols=125 Identities=14% Similarity=0.200 Sum_probs=98.0
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc----cCchHHHHHH-HHHHHHHHHHHHHhhh-----------
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS----VNPFRLIGVG-LTVWTLAVVGCGFSFS----------- 153 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r~~~~~~-~~~~~~~~~~~~~~~~----------- 153 (255)
|++..+.|++....+.+-..--+...+.+++.|..+|| |||||.++.. .+...++.++.+++.+
T Consensus 56 tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~ 135 (498)
T KOG0637|consen 56 TPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERK 135 (498)
T ss_pred cHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCccc
Confidence 46667789998888888777777888999999999996 8988887755 4455566666666543
Q ss_pred ------HHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhH-HHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 154 ------FWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTA-WLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 154 ------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
...++++.-+.=++.-..+...-+++.|....+++.+ +++.+..+..+|+++|..++++..
T Consensus 136 ~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~ 203 (498)
T KOG0637|consen 136 PVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLG 203 (498)
T ss_pred ccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccC
Confidence 3344555556666777788888999999998887777 999999999999999999998764
No 241
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.15 E-value=1.6e-05 Score=70.37 Aligned_cols=138 Identities=14% Similarity=0.063 Sum_probs=90.1
Q ss_pred cccccc-ccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc----cCchHHHHHHHHHHHHHH-HHHHHhhhHHHHHHHHHH
Q 025282 90 TGIQGD-FDLNNFQDGVLSSAFMVGLLVASPIFASLARS----VNPFRLIGVGLTVWTLAV-VGCGFSFSFWMIAICRML 163 (255)
Q Consensus 90 ~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~G~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l 163 (255)
|.+.++ .|.+..+.+.+.+.+.++.+++.+++|+++|| ..+|..+...+.+..+.. +......+.......-+.
T Consensus 297 pl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~ 376 (495)
T KOG2533|consen 297 PLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLI 376 (495)
T ss_pred HHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHh
Confidence 455555 56899999999999999999999999999999 677777766666655443 444444444444444444
Q ss_pred HHhhhhhHhhhhHhhhhhcCcccchh-HHHHHHHhhhhhhhhhhh-hhhhhhc-cchhHHHHHHHHH
Q 025282 164 VGVGEASFISLAAPFIDDNAPVAKKT-AWLGVFYMCLPSGYAIGY-VYGGWVG-HYNWRYAFWGEAI 227 (255)
Q Consensus 164 ~G~~~g~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~g~~~g~-~~~~~l~-~~~w~~~f~~~~~ 227 (255)
.+.+.....+.....+++....+.|. ...+....+.+.++.++| ...+... .++|...|.+...
T Consensus 377 ~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~ 443 (495)
T KOG2533|consen 377 GPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVA 443 (495)
T ss_pred cchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHH
Confidence 55556666777788888777665443 344444444555544444 3333334 5788888844333
No 242
>PTZ00207 hypothetical protein; Provisional
Probab=98.12 E-value=3.7e-05 Score=69.47 Aligned_cols=148 Identities=7% Similarity=-0.099 Sum_probs=106.6
Q ss_pred ccccccc-cC-Ccch-hHHHHHHHHHHHHhHhhHHHhhh----c-----ccCchHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 025282 90 TGIQGDF-DL-NNFQ-DGVLSSAFMVGLLVASPIFASLA----R-----SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMI 157 (255)
Q Consensus 90 ~~~~~~~-~~-s~~~-~~~~~~~~~~~~~~~~~~~g~l~----d-----r~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
.+|.+.+ |. .+++ ...+.+++.++.++|.+..|++. + |+.|-..+.+..+ +.++.+++.+.-....+
T Consensus 377 ~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L 455 (591)
T PTZ00207 377 RFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAAL 455 (591)
T ss_pred HHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHh
Confidence 4666666 54 2222 22278888888889998888877 1 1333333444444 66666666666444689
Q ss_pred HHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhh-hhhhhhhc--------------cchhHHHH
Q 025282 158 AICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIG-YVYGGWVG--------------HYNWRYAF 222 (255)
Q Consensus 158 ~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g-~~~~~~l~--------------~~~w~~~f 222 (255)
++..++.|++.|..+++....++|+|. |+-|+...+......+|..+- -.+.|.+. ..-+|.+|
T Consensus 456 ~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~ 534 (591)
T PTZ00207 456 PLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPL 534 (591)
T ss_pred HHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHH
Confidence 999999999999999999999999999 999999988888888887664 44555443 11378899
Q ss_pred HHHHHHHHHHHHHHHHh
Q 025282 223 WGEAILMFPFAVLGFVM 239 (255)
Q Consensus 223 ~~~~~~~~~~~~~~~~~ 239 (255)
++.+.+++...+....+
T Consensus 535 ~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 535 AFLLGLSFLAFITSTYV 551 (591)
T ss_pred HHHHHHHHHHHHHHhhe
Confidence 99988888777765544
No 243
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.08 E-value=0.00011 Score=63.11 Aligned_cols=116 Identities=11% Similarity=0.118 Sum_probs=83.6
Q ss_pred ccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHH---HHHhhhHHHHHHHHHHHHhhhhhHh
Q 025282 96 FDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVG---CGFSFSFWMIAICRMLVGVGEASFI 172 (255)
Q Consensus 96 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~G~~~g~~~ 172 (255)
+.-..++..+....|.+|..++.--...+ |+-+-+.+.+--.+..+..++ .-+.++.|.+++.-+..|+..|..+
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHH
Confidence 44345678888889998888776543322 342222222222222222222 3345789999999999999999999
Q ss_pred hhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhh
Q 025282 173 SLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (255)
Q Consensus 173 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (255)
......+.|-.++++|-.++|.....-++|..++.+++-.+
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888776654
No 244
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.06 E-value=0.00013 Score=64.78 Aligned_cols=137 Identities=10% Similarity=0.057 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHHHhHhhHHHhhhcccCc--h----H-HHHHHHHHHHHHHHHHHHh---------hhHHHHHHHHHHHHh
Q 025282 103 DGVLSSAFMVGLLVASPIFASLARSVNP--F----R-LIGVGLTVWTLAVVGCGFS---------FSFWMIAICRMLVGV 166 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~--r----~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~G~ 166 (255)
.+|.++++.+..++.+++.+++=.|.+| | . =+.+|+++.+++.+.+.++ .+.+++++..+++++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 5788888888888888877776555422 1 1 1567888888887766542 267788999999999
Q ss_pred hhhhHhhhhHhhhhhcCcccchhHHHHHHHhhh-hhhhhhhhhhhhhhc-c------------chhHHHHHHHHHHHHHH
Q 025282 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCL-PSGYAIGYVYGGWVG-H------------YNWRYAFWGEAILMFPF 232 (255)
Q Consensus 167 ~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~g~~~~~~l~-~------------~~w~~~f~~~~~~~~~~ 232 (255)
|.-...|+..+++++..|++.||..+|.+.... .+|..++..+++... . ..+...|...+...+++
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999986643 566666665555442 0 13556777777766655
Q ss_pred -HHHHHHh
Q 025282 233 -AVLGFVM 239 (255)
Q Consensus 233 -~~~~~~~ 239 (255)
.++.+.+
T Consensus 470 ~~~~~~~~ 477 (493)
T PRK15462 470 VGVVLMIW 477 (493)
T ss_pred HHHHHHHH
Confidence 4444433
No 245
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.02 E-value=0.0013 Score=58.07 Aligned_cols=125 Identities=10% Similarity=0.085 Sum_probs=93.3
Q ss_pred ccccccccC-----CcchhHHHHHHHHHHHHhH-hhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh----h-------
Q 025282 90 TGIQGDFDL-----NNFQDGVLSSAFMVGLLVA-SPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS----F------- 152 (255)
Q Consensus 90 ~~~~~~~~~-----s~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~----~------- 152 (255)
..+++.+.. +.+...++-+...+...+. .++.+++++|++|++++-+....+.+..+++++. +
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~ 106 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTA 106 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcH
Confidence 466777655 3356788888777766666 8899999999999999988777777776666654 1
Q ss_pred --------------------hHHHHHHHHHHHHhhhhhHhh-hhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhh
Q 025282 153 --------------------SFWMIAICRMLVGVGEASFIS-LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGG 211 (255)
Q Consensus 153 --------------------~~~~~~~~~~l~G~~~g~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 211 (255)
+.|...+..+...+-.....+ +-++++.|.++.++-.|..++.+.+.++|..+++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~ 186 (472)
T TIGR00769 107 LADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK 186 (472)
T ss_pred HHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333333444454445554 77889999999999999999999999999999998877
Q ss_pred hhc
Q 025282 212 WVG 214 (255)
Q Consensus 212 ~l~ 214 (255)
++.
T Consensus 187 ~~~ 189 (472)
T TIGR00769 187 YFS 189 (472)
T ss_pred HHH
Confidence 764
No 246
>PRK03612 spermidine synthase; Provisional
Probab=97.98 E-value=0.00072 Score=60.61 Aligned_cols=141 Identities=11% Similarity=-0.031 Sum_probs=85.2
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHH---HHHH----HHhhhH-HHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLA---VVGC----GFSFSF-WMIAICRM 162 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~---~~~~----~~~~~~-~~~~~~~~ 162 (255)
.+.--+|-+..+.+.+.+++..|..+|+.+.+++.++.-+ +...+.+.+..++ ..+. .+.... ..++...+
T Consensus 40 ~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~-~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 118 (521)
T PRK03612 40 LASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAA-GFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVL 118 (521)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344567788888999999999999999999988744322 2222221111111 1111 111111 12233455
Q ss_pred HHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc--cchhHHHHHHHHHHHHHHH
Q 025282 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFA 233 (255)
Q Consensus 163 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~f~~~~~~~~~~~ 233 (255)
+.++..|+..|....+..+... ++-+...|-.+....+|.++|.++.+++. ..|-....++.+.+.++.+
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 6778888888887776655432 23566778888888889999998888776 5665544445555444444
No 247
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.95 E-value=1.7e-05 Score=51.75 Aligned_cols=52 Identities=21% Similarity=0.197 Sum_probs=45.7
Q ss_pred ccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHH
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVW 141 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 141 (255)
|...++.|++..+.|.+.++..+...++++++|.++||+++++.++....++
T Consensus 24 ~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 24 PLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 4666789999999999999999999999999999999999988877665543
No 248
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.76 E-value=0.00093 Score=58.37 Aligned_cols=143 Identities=17% Similarity=0.233 Sum_probs=108.2
Q ss_pred hhHHHHHHHHHHHHhHhhHHHhhhcccCch-------HHHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHH
Q 025282 102 QDGVLSSAFMVGLLVASPIFASLARSVNPF-------RLIGVGLTVWTLAVVGCGFS----------FSFWMIAICRMLV 164 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r-------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~ 164 (255)
..++.++...+..++.+++..++-.+.+++ .=+-+++++++.+.++.... .+.++++...+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 357788888888888888888777774433 23456667776666655543 2688999999999
Q ss_pred HhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhh-------hccchhHHHHHHHHHHHHHHHHHHH
Q 025282 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGW-------VGHYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 165 G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~-------l~~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
++|.=...|+..+++....|+.-.+..++.+......|+.++..+.+. .........|+..+...++..+..+
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988888888777772 1144556677777777777666665
Q ss_pred HhccCcc
Q 025282 238 VMKPLQL 244 (255)
Q Consensus 238 ~~~p~~~ 244 (255)
...|+..
T Consensus 485 ~~~~~~~ 491 (498)
T COG3104 485 LLSPKLN 491 (498)
T ss_pred HhhHHHH
Confidence 5555433
No 249
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.66 E-value=0.001 Score=57.01 Aligned_cols=144 Identities=11% Similarity=-0.025 Sum_probs=104.6
Q ss_pred chhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHH-HHHHHHHHHHHHHhhh---HHHHHHHHHHHHhhhhhHhhhhH
Q 025282 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVG-LTVWTLAVVGCGFSFS---FWMIAICRMLVGVGEASFISLAA 176 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~l~G~~~g~~~~~~~ 176 (255)
...+...++..+..++-.++.|.++|+.|+||..+.. ..+..++..+..+.++ ++...+..++..++.......-.
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 3457778888888999999999999999976665544 4445556666666654 44455567788888888888999
Q ss_pred hhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhh--h----------------c-cchhHHHHHHHHHHHHHHHHHHH
Q 025282 177 PFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGW--V----------------G-HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 177 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~--l----------------~-~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
+++.+..++++-++.-++-.....+|+.+.-+..-. . . ...-|..+.+.++..++..+..+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 999999999888888777777777777654433211 1 0 23578889999988888888777
Q ss_pred HhccCcc
Q 025282 238 VMKPLQL 244 (255)
Q Consensus 238 ~~~p~~~ 244 (255)
+..++.+
T Consensus 218 ~~v~~~~ 224 (438)
T COG2270 218 LNVHDAE 224 (438)
T ss_pred hcccccc
Confidence 7655544
No 250
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.65 E-value=0.00076 Score=60.93 Aligned_cols=150 Identities=15% Similarity=0.138 Sum_probs=117.8
Q ss_pred cccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc-cCchHHHHHHHHHHHHHHHHHHHhhh--------------
Q 025282 89 GTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSFS-------------- 153 (255)
Q Consensus 89 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~~-------------- 153 (255)
+.++.++++.+...+.-..+.+.-......+..++++|- +||-+.+.++.++..++.++..++..
T Consensus 61 v~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~ 140 (571)
T KOG1237|consen 61 VTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPG 140 (571)
T ss_pred HHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCC
Confidence 357888888887777777888888888888999999996 68999999999998888766554321
Q ss_pred -----------HHHHHHHHHHHHhhhhhHhhhhHhhhhhcCc---cc-ch--hHHHHHHHhhhhhhhhhhhhhhhhhc-c
Q 025282 154 -----------FWMIAICRMLVGVGEASFISLAAPFIDDNAP---VA-KK--TAWLGVFYMCLPSGYAIGYVYGGWVG-H 215 (255)
Q Consensus 154 -----------~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~---~~-~r--~~~~~~~~~~~~~g~~~g~~~~~~l~-~ 215 (255)
...++.+.-+..+|.|+.-+...++-+|-++ ++ ++ ...+.++....+.|..++..+..+.- +
T Consensus 141 ~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~ 220 (571)
T KOG1237|consen 141 GNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDN 220 (571)
T ss_pred CCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhc
Confidence 2356666777888999999999999999998 32 22 36778888888999988888877876 8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH
Q 025282 216 YNWRYAFWGEAILMFPFAVLGFV 238 (255)
Q Consensus 216 ~~w~~~f~~~~~~~~~~~~~~~~ 238 (255)
.+|.+.|.+..+...+..++++.
T Consensus 221 ~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 221 VGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred ccceeeccHHHHHHHHHHHHHHc
Confidence 99999999998887666555443
No 251
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.35 E-value=0.00027 Score=61.99 Aligned_cols=83 Identities=12% Similarity=0.062 Sum_probs=63.1
Q ss_pred HHHHHHHH-HHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHH
Q 025282 154 FWMIAICR-MLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFP 231 (255)
Q Consensus 154 ~~~~~~~~-~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~ 231 (255)
.+.+++.. ++.|++.-.......++-+|...+++++.+.++++.....+..+||++..... ..|.|+...+.....++
T Consensus 387 ~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~ 466 (488)
T KOG2325|consen 387 LILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLV 466 (488)
T ss_pred hhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHH
Confidence 34445543 45677776677778888999999999999999999999999999999988877 77777776666555444
Q ss_pred HHHHH
Q 025282 232 FAVLG 236 (255)
Q Consensus 232 ~~~~~ 236 (255)
...++
T Consensus 467 ~~~l~ 471 (488)
T KOG2325|consen 467 VAALW 471 (488)
T ss_pred HHHHH
Confidence 44433
No 252
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.35 E-value=0.0028 Score=55.63 Aligned_cols=145 Identities=13% Similarity=0.025 Sum_probs=105.5
Q ss_pred CCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHHHhh
Q 025282 98 LNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS----------FSFWMIAICRMLVGVG 167 (255)
Q Consensus 98 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~G~~ 167 (255)
+++...+.+..+..++..++..+..++..+..-|+++.+..++.++..+.-... ++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 788888999988999999999999988888888999888887776665542211 1223344455677777
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cch--------hHHHHHHHHHHHHHHHHHHHH
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN--------WRYAFWGEAILMFPFAVLGFV 238 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~--------w~~~f~~~~~~~~~~~~~~~~ 238 (255)
.+..+-....+++|+.|+..-|+..++..+..++|..++..++..+. ..+ -.+..++..+..++...+..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 77777788889999999999999999999999999999988888775 222 334455555555433333333
Q ss_pred hccCc
Q 025282 239 MKPLQ 243 (255)
Q Consensus 239 ~~p~~ 243 (255)
.|++
T Consensus 412 -Lp~~ 415 (433)
T PF03092_consen 412 -LPPQ 415 (433)
T ss_pred -cCCC
Confidence 4543
No 253
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.33 E-value=0.0016 Score=56.85 Aligned_cols=122 Identities=15% Similarity=0.029 Sum_probs=89.6
Q ss_pred ccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH---h---h----hHHHHHHHH
Q 025282 92 IQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF---S---F----SFWMIAICR 161 (255)
Q Consensus 92 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~---~---~----~~~~~~~~~ 161 (255)
+....|+++...|..-+...+....+.+...++.+|+|..+.-++++..-.....++.. . + +...++.+-
T Consensus 284 yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi 363 (432)
T PF06963_consen 284 YLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGI 363 (432)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHH
Confidence 33344999999999999999999999999999999999988887776654433333222 1 1 333444444
Q ss_pred HHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhh
Q 025282 162 MLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (255)
Q Consensus 162 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (255)
++.=+|.=++.-....++.|..|+++||...|.-.+..++-..+-..++-.+
T Consensus 364 ~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 364 ALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4444555566677788899999999999999999888888777766554433
No 254
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.28 E-value=0.0068 Score=52.23 Aligned_cols=134 Identities=14% Similarity=0.050 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhc
Q 025282 103 DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDN 182 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~ 182 (255)
.+.+.-+-.+-..+..+.+.++.+|+.-+.=+....++.+++.++.+++++.+.-+++-++.+++.|........+.. .
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-F 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-h
Confidence 344555555666677788888899887555556677788889999999999999889999999999988887777755 4
Q ss_pred CcccchhHHHHHHHhhhhhhhhhhhhhhhhhc--cchhHHHHHHHHHHHHHHHHHHHHhcc
Q 025282 183 APVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (255)
Q Consensus 183 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~f~~~~~~~~~~~~~~~~~~p 241 (255)
+++ ...+.+.++.+.++++|+..-..+. ...-|..+.+...+.++..+..++..|
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~ 196 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLP 196 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 442 3567777777777888776654444 345577777777666555544444433
No 255
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.96 E-value=0.00019 Score=64.50 Aligned_cols=125 Identities=13% Similarity=0.124 Sum_probs=0.0
Q ss_pred ccccccccCCcchhHHHHHHHHH-HHHhHhhHHHhhhcccC--chHHHHHHHHHHHHHHHHHH---H-----------h-
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMV-GLLVASPIFASLARSVN--PFRLIGVGLTVWTLAVVGCG---F-----------S- 151 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G--~r~~~~~~~~~~~~~~~~~~---~-----------~- 151 (255)
.+++.+|++++.+++++..+..+ +.++|.++.|++..|+. .|..+.+..+...+..+... + .
T Consensus 330 KylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~ 409 (539)
T PF03137_consen 330 KYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTV 409 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecC
Confidence 57788999999999999877666 66788899999999874 45554444444333333211 0 0
Q ss_pred ---------------------------------------hhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHH
Q 025282 152 ---------------------------------------FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWL 192 (255)
Q Consensus 152 ---------------------------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~ 192 (255)
..+..+++..++.-+..+.........+-+..++++|+.++
T Consensus 410 ~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~Al 489 (539)
T PF03137_consen 410 PYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFAL 489 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhh
Confidence 01234444445555555556666666777889999999999
Q ss_pred HHHHhhhhh-hhhhhhhhhhhhc
Q 025282 193 GVFYMCLPS-GYAIGYVYGGWVG 214 (255)
Q Consensus 193 ~~~~~~~~~-g~~~g~~~~~~l~ 214 (255)
|+......+ |.+-||++-|.+.
T Consensus 490 Gv~~~~~rllg~IPgPIifG~ii 512 (539)
T PF03137_consen 490 GVQWLIIRLLGFIPGPIIFGAII 512 (539)
T ss_dssp -----------------------
T ss_pred hHHHHHHHhhcCcchHHHHhHHH
Confidence 998776554 7777898888775
No 256
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.94 E-value=0.0049 Score=53.98 Aligned_cols=108 Identities=16% Similarity=0.205 Sum_probs=90.5
Q ss_pred hHHH-HHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhh
Q 025282 103 DGVL-SSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDD 181 (255)
Q Consensus 103 ~~~~-~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~ 181 (255)
.|+. .++....+.+.+++.+.+.|+.|+|+.+.++........+.+-+. |-+.++++..+.|+|.+..+...-.++.|
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~ 129 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTS 129 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhh
Confidence 3444 777888889999999999999999999999999988877766544 46677888999999999999999999999
Q ss_pred cCcccchhHHHHHHHhhhhhhhhhhhhhhh
Q 025282 182 NAPVAKKTAWLGVFYMCLPSGYAIGYVYGG 211 (255)
Q Consensus 182 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 211 (255)
..+++.+.+..++.-.....+.++|..+..
T Consensus 130 ~st~~tie~Nisi~Wai~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 130 NSTRETIERNISIFWAIGQSSLIIGGIILF 159 (461)
T ss_pred cCChhhHHHHHHHHHHHHHHHHHhhhHhhe
Confidence 999999999988887777777777655443
No 257
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.94 E-value=0.0012 Score=57.02 Aligned_cols=149 Identities=8% Similarity=-0.066 Sum_probs=92.2
Q ss_pred cccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCc-hHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHhhhh
Q 025282 95 DFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNP-FRLIGVGLTVWTLAVVGCGFS----FSFWMIAICRMLVGVGEA 169 (255)
Q Consensus 95 ~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~-r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~G~~~g 169 (255)
.-|.+....|+......++.++++...|.+.||... |....+......++.+..... ...+.++....+.|.+..
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~ 374 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGT 374 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhc
Confidence 344455778999999999999999999999999874 444445555444553222222 234456666778888888
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cch---hHHH-HHHHHHHHHHHHHHHHHhccCc
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN---WRYA-FWGEAILMFPFAVLGFVMKPLQ 243 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~---w~~~-f~~~~~~~~~~~~~~~~~~p~~ 243 (255)
...|....+-.|..-|..-+...|+.+....+-.++-..+.+... ..+ |... -+.....+++..++..+++|+.
T Consensus 375 ~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y 453 (480)
T KOG2563|consen 375 GYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDY 453 (480)
T ss_pred CCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhH
Confidence 888988888887765565556666666555544444444444444 222 3332 2233334444555555665543
No 258
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.89 E-value=0.0012 Score=53.46 Aligned_cols=89 Identities=16% Similarity=0.165 Sum_probs=70.1
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHhh
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF---SFSFWMIAICRMLVGVG 167 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~G~~ 167 (255)
++-..++..+.++|.+...-.-..++.+.+.|.+.||-|||+..+. +++..+++.. ++.|-.++++|++-|+.
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvt----ycitYiLsCiTKhSpqYkVLmVGR~LGGia 137 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT----YCITYILSCITKHSPQYKVLMVGRVLGGIA 137 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceee----ehHHHHHHHHhhcCCceEEEeehhhhhhHH
Confidence 6677888888898888777777778888899999999999997544 4444444444 56788899999999999
Q ss_pred hhhHhhhhHhh-hhhcC
Q 025282 168 EASFISLAAPF-IDDNA 183 (255)
Q Consensus 168 ~g~~~~~~~~~-~~~~~ 183 (255)
.+..++..-++ +.|.-
T Consensus 138 TsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 138 TSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99998887776 45654
No 259
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.85 E-value=0.03 Score=49.19 Aligned_cols=107 Identities=12% Similarity=0.050 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHhHhhHHHhhhcccCch--HHHHHHH--HHHHHHHHHHHH---------hhhHHHHHHHHHHHHhhhhh
Q 025282 104 GVLSSAFMVGLLVASPIFASLARSVNPF--RLIGVGL--TVWTLAVVGCGF---------SFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r--~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~~~l~G~~~g~ 170 (255)
-.....++++-.+|..+..+.. .-++| ++.+.+. +++....++|.. -++-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4556788888888888665431 11222 3332221 122222233332 24666777889999999999
Q ss_pred HhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhh
Q 025282 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGG 211 (255)
Q Consensus 171 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 211 (255)
..+..+.+..+..++++|-.+..+...+..+|-.+|..++-
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988988888888888776643
No 260
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.64 E-value=0.013 Score=53.94 Aligned_cols=125 Identities=8% Similarity=0.032 Sum_probs=88.5
Q ss_pred ccccccccCCcchhHHHHHHHHH-HHHhHhhHHHhhhcccC--chHHHHHHHHHHHHHHHHHH-----------------
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMV-GLLVASPIFASLARSVN--PFRLIGVGLTVWTLAVVGCG----------------- 149 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G--~r~~~~~~~~~~~~~~~~~~----------------- 149 (255)
.++++++|+++.+++++.+...+ +.+++.++.|++.||++ .|+.+.+++++..++.++..
T Consensus 355 ~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~~ 434 (633)
T TIGR00805 355 KYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCESAPVAGVNN 434 (633)
T ss_pred HHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCCCccceeec
Confidence 46677899999999999988776 67899999999999998 55666666666655543311
Q ss_pred -------------H-------------------------------------------------------------h----
Q 025282 150 -------------F-------------------------------------------------------------S---- 151 (255)
Q Consensus 150 -------------~-------------------------------------------------------------~---- 151 (255)
- +
T Consensus 435 ~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~C 514 (633)
T TIGR00805 435 PSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPPC 514 (633)
T ss_pred cCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCcCCCCCccc
Confidence 0 0
Q ss_pred hh-HHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhh-hhhhhhhhhhhhc
Q 025282 152 FS-FWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS-GYAIGYVYGGWVG 214 (255)
Q Consensus 152 ~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~ 214 (255)
.+ +..+++..++..+..+.........+-+..|+++|..++|+......+ |.+-+|++-|++.
T Consensus 515 ~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~i 579 (633)
T TIGR00805 515 ATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLI 579 (633)
T ss_pred chhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhh
Confidence 01 223333444444444455555666677889999999999998877654 7788999998875
No 261
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.49 E-value=0.064 Score=45.82 Aligned_cols=141 Identities=11% Similarity=0.050 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhc--
Q 025282 49 RLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR-- 126 (255)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-- 126 (255)
+-+..+.+.++.++...+..+ .+|.+.+.-|.|.++.+....++. -..--+++.++.|
T Consensus 31 ~~illLl~LYllQGiP~GL~~------------------~iP~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~ 90 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG------------------AIPLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSV 90 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh------------------hhHHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHH
Confidence 345556667777766555443 237888878888777655433321 1234567778888
Q ss_pred ---ccCchHHHHH-HHHHHHHHHHHHHH-----------hhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHH
Q 025282 127 ---SVNPFRLIGV-GLTVWTLAVVGCGF-----------SFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAW 191 (255)
Q Consensus 127 ---r~G~r~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~ 191 (255)
|+||||.-++ +..+.+..+.+.+. .++...+....++.=+..+.-..+.-.+.-.+..+++-|.+
T Consensus 91 y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgya 170 (510)
T KOG3574|consen 91 YSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYA 170 (510)
T ss_pred HHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCch
Confidence 9999886443 23333333333332 23344444455566666677677778888888888998888
Q ss_pred HHHHHhhhhhhhhhhhhh
Q 025282 192 LGVFYMCLPSGYAIGYVY 209 (255)
Q Consensus 192 ~~~~~~~~~~g~~~g~~~ 209 (255)
......+...|.+++..+
T Consensus 171 ST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 171 STCQSVGQTAGYFLGNVV 188 (510)
T ss_pred hHHHHHHHhhhHHhhcce
Confidence 877777777777776544
No 262
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.39 E-value=0.12 Score=45.41 Aligned_cols=109 Identities=14% Similarity=0.259 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHhHhhHHHhhhcc---cCchHHHHHHHHHHHHHHHHHHHh------------------hhHHHHHHHHH
Q 025282 104 GVLSSAFMVGLLVASPIFASLARS---VNPFRLIGVGLTVWTLAVVGCGFS------------------FSFWMIAICRM 162 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~g~l~dr---~G~r~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 162 (255)
+...-...++..+++.+.+.+++| +||++.+.++..+..++.++.-.. +++....+.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 333444556667777777777765 899999999999988888776543 24667777889
Q ss_pred HHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhh
Q 025282 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (255)
Q Consensus 163 l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (255)
+.|++-+......+.++.+.. +++|..+.+++..-..++..++-......
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999999999 48888888888777777666554444433
No 263
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.28 E-value=0.73 Score=40.73 Aligned_cols=124 Identities=9% Similarity=0.125 Sum_probs=88.5
Q ss_pred cccccccC---CcchhHHHHHHHHH-HHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh---------------
Q 025282 91 GIQGDFDL---NNFQDGVLSSAFMV-GLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS--------------- 151 (255)
Q Consensus 91 ~~~~~~~~---s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--------------- 151 (255)
.+++.+.+ .++...++-+..-+ +.++..++..++.+++.+++++-+-+..+....+++++.
T Consensus 48 ~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~ 127 (509)
T COG3202 48 SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFS 127 (509)
T ss_pred HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHH
Confidence 55666544 45566777777766 677888999999999999999988888777777777752
Q ss_pred h-----------------hHHHHHHHHHHHHhhhhhHhh-hhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhh
Q 025282 152 F-----------------SFWMIAICRMLVGVGEASFIS-LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (255)
Q Consensus 152 ~-----------------~~~~~~~~~~l~G~~~g~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (255)
+ +.|...+..+..=+-.....+ .-..+..|....++-.|..++++...+++..++..+..++
T Consensus 128 ~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 128 RDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred HHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 012222222222232233333 4567789999999999999999999999999888887777
Q ss_pred c
Q 025282 214 G 214 (255)
Q Consensus 214 ~ 214 (255)
.
T Consensus 208 ~ 208 (509)
T COG3202 208 S 208 (509)
T ss_pred h
Confidence 5
No 264
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.22 E-value=0.004 Score=55.04 Aligned_cols=65 Identities=18% Similarity=0.081 Sum_probs=52.8
Q ss_pred CCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHH-HHHHHHHHHHHHHHHh
Q 025282 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIG-VGLTVWTLAVVGCGFS 151 (255)
Q Consensus 87 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~-~~~~~~~~~~~~~~~~ 151 (255)
|.++.+-+++|+++.+.|.+.+.--+..+++.+++|+++||+-+||.++ .+++....+.++..+.
T Consensus 32 pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv 97 (618)
T KOG3762|consen 32 PLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFV 97 (618)
T ss_pred hHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeec
Confidence 4566788999999999999999999999999999999999998655555 4555556666666654
No 265
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.01 E-value=0.035 Score=48.36 Aligned_cols=127 Identities=10% Similarity=0.017 Sum_probs=75.5
Q ss_pred cccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCc----hHHHHHHHHHHHH------HHHHHH--HhhhHHHHHHH
Q 025282 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNP----FRLIGVGLTVWTL------AVVGCG--FSFSFWMIAIC 160 (255)
Q Consensus 93 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~----r~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~ 160 (255)
.+-.|.+..+..++..++..+..+|.++.|.++||+.| -....+.-+..+. ..+.+. +..+...+...
T Consensus 275 ~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~i 354 (493)
T KOG1330|consen 275 YELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLI 354 (493)
T ss_pred HHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHH
Confidence 33345566666777788888889999999999998422 1111222221111 111111 12233334444
Q ss_pred HHHHHhhhhh-HhhhhHhhhhhcCcccchhHHHHHHHhhhhh-hhhhhhhhhhhhc--cchhH
Q 025282 161 RMLVGVGEAS-FISLAAPFIDDNAPVAKKTAWLGVFYMCLPS-GYAIGYVYGGWVG--HYNWR 219 (255)
Q Consensus 161 ~~l~G~~~g~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~--~~~w~ 219 (255)
.++.|+.... .++....+..|..|+++|..+.++......+ |..-+|.+.|.+. ..||+
T Consensus 355 l~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 355 LFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 5555654443 3445556778999999999999988766554 5555665777776 55666
No 266
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.98 E-value=1.1 Score=40.06 Aligned_cols=116 Identities=10% Similarity=0.116 Sum_probs=78.8
Q ss_pred CcchhHHHHHHHHH-HHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh--------------------------
Q 025282 99 NNFQDGVLSSAFMV-GLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-------------------------- 151 (255)
Q Consensus 99 s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-------------------------- 151 (255)
.++...++-....+ +.++...+..+++++++|.+++-+....+.....++++.
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 44555565554333 445667889999999999999887777766666665542
Q ss_pred -----hhHHHHHHHHHHHHhhhhhHhh-hhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 152 -----FSFWMIAICRMLVGVGEASFIS-LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 152 -----~~~~~~~~~~~l~G~~~g~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
-+.|.+....+..-+-.....+ .-+.++.|..+.++-.+..++++.+.++|.+++..+..++.
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~ 204 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFS 204 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0123333333333333333333 45788999999999999999999999999988877766554
No 267
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.93 E-value=0.034 Score=51.37 Aligned_cols=125 Identities=13% Similarity=0.055 Sum_probs=85.9
Q ss_pred ccccccccCCcchhHHHHHHHHH-HHHhHhhHHHhhhccc--CchHHHHHHHHHHHHHHHHHH---H-------------
Q 025282 90 TGIQGDFDLNNFQDGVLSSAFMV-GLLVASPIFASLARSV--NPFRLIGVGLTVWTLAVVGCG---F------------- 150 (255)
Q Consensus 90 ~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~--G~r~~~~~~~~~~~~~~~~~~---~------------- 150 (255)
.+++.+|+.+...+..+.+...+ +.++|.++.|++..|+ ..|....+.++...+..+... +
T Consensus 417 KyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~ 496 (735)
T KOG3626|consen 417 KYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTN 496 (735)
T ss_pred HHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceec
Confidence 57778999999999998866555 4568888999999986 455555555555444444311 1
Q ss_pred ------------------------------------------------------------------hh------------
Q 025282 151 ------------------------------------------------------------------SF------------ 152 (255)
Q Consensus 151 ------------------------------------------------------------------~~------------ 152 (255)
.+
T Consensus 497 ~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G 576 (735)
T KOG3626|consen 497 SYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKG 576 (735)
T ss_pred CCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceeecC
Confidence 00
Q ss_pred --------hHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhh-hhhhhhhhhhhhc
Q 025282 153 --------SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS-GYAIGYVYGGWVG 214 (255)
Q Consensus 153 --------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~ 214 (255)
.+..+++..++.-+..+...+..+.++-+..++++|..++|+..+...+ |.+-+|++-|++.
T Consensus 577 ~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~I 647 (735)
T KOG3626|consen 577 YCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVI 647 (735)
T ss_pred CCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhH
Confidence 0123444444444555555566777888999999999999998777654 7777999988874
No 268
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.74 E-value=0.15 Score=44.17 Aligned_cols=97 Identities=11% Similarity=0.060 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhh
Q 025282 102 QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIG--VGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFI 179 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~ 179 (255)
--|.+.++..+..+++.+..|++..++.+..-+. ...++.+...++++..+|.|..+++.++.+.......+.+..-+
T Consensus 286 YNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qI 365 (412)
T PF01770_consen 286 YNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQI 365 (412)
T ss_pred cchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3488888888888899999999977777644444 33444456666778889999999999998888888878888778
Q ss_pred hhcCcccchhHHHHHHHhh
Q 025282 180 DDNAPVAKKTAWLGVFYMC 198 (255)
Q Consensus 180 ~~~~~~~~r~~~~~~~~~~ 198 (255)
+.....++-+..+|+....
T Consensus 366 A~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 366 AKNLSEERYALVFGINTFV 384 (412)
T ss_pred HHhccccceeeeeeeHHHH
Confidence 8777777777777665554
No 269
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.40 E-value=0.0048 Score=51.62 Aligned_cols=106 Identities=18% Similarity=0.131 Sum_probs=3.8
Q ss_pred HHHHHHHHHHhHhhHHHhhhcc-cCchHHHHHHHH--HHHHHHHHHH----------HhhhHHHHHHHHHHHHhhhhhHh
Q 025282 106 LSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLT--VWTLAVVGCG----------FSFSFWMIAICRMLVGVGEASFI 172 (255)
Q Consensus 106 ~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~~~~~l~G~~~g~~~ 172 (255)
....++++-.+|..+.++..-+ ..+|++.+.+.. ++....++|. +.+|-+..++..++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4567889999999888764321 134444432211 1122222221 22355677788899999999999
Q ss_pred hhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhh
Q 025282 173 SLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGG 211 (255)
Q Consensus 173 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 211 (255)
+..+.+..+..++++|..+-.+...+..+|-.+|..++-
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp HHHH-----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888888888888777766543
No 270
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.12 E-value=0.85 Score=37.44 Aligned_cols=135 Identities=15% Similarity=0.045 Sum_probs=89.1
Q ss_pred hHHHHHHHHHHHHhHhhHHHhhhcccCch--HHHHHHHHHHHHHHHHHHH----hh---hHHHHHHHHHHHHhhhhhHhh
Q 025282 103 DGVLSSAFMVGLLVASPIFASLARSVNPF--RLIGVGLTVWTLAVVGCGF----SF---SFWMIAICRMLVGVGEASFIS 173 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r--~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~l~G~~~g~~~~ 173 (255)
-|.+.+.++++..+|+-+..++..|-.+| ..+.+..+...+...+..+ ++ +...=+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 37888899999999999988887765433 3344444444333333222 11 233335666677788899999
Q ss_pred hhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHH
Q 025282 174 LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 174 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
..+.+=+++.|.+.|...+.++....++-..++-..--.-. ..+-|.+|-++..+..+..+..-
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~ 428 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQR 428 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHHH
Confidence 99999999999999999998887766654443322111111 45667888888887766655543
No 271
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.89 E-value=0.49 Score=40.89 Aligned_cols=108 Identities=20% Similarity=0.126 Sum_probs=73.0
Q ss_pred chhHHHHHH-HHHHHHhHhhHHHhhhcccCchHHHHHHHHHH-HHHHHH-H------HHhhhHHHHHHHHHHHHhhhhhH
Q 025282 101 FQDGVLSSA-FMVGLLVASPIFASLARSVNPFRLIGVGLTVW-TLAVVG-C------GFSFSFWMIAICRMLVGVGEASF 171 (255)
Q Consensus 101 ~~~~~~~~~-~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~-~~~~~~-~------~~~~~~~~~~~~~~l~G~~~g~~ 171 (255)
.-.-..... +++...+|.+.+.++-++- ||...+..+.=. .+-.+. | .+-++-+++++...+.|+..|-.
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYl 360 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYL 360 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchH
Confidence 334455556 8888889977777776554 333333322222 122221 1 22356778889999999999999
Q ss_pred hhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhh
Q 025282 172 ISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVY 209 (255)
Q Consensus 172 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 209 (255)
.++.+.+..+-.+++++-.+-.+...+...|..+|..+
T Consensus 361 tsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 361 TSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred hhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99999999999999988777777777777676666544
No 272
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=93.56 E-value=0.94 Score=40.29 Aligned_cols=97 Identities=14% Similarity=0.066 Sum_probs=75.3
Q ss_pred hHHHHHHHHHHHHhHhhHHHhhhcccCch--HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhh
Q 025282 103 DGVLSSAFMVGLLVASPIFASLARSVNPF--RLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFID 180 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 180 (255)
-|.+.++..+..++..+..|++-.++.+- ..+.+..++.+...++++..+|+|..+++.++.+.......+.+..-++
T Consensus 300 NG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA 379 (511)
T TIGR00806 300 NGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIA 379 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36667777777888999999998777552 3333444455555667778899999999999999999999999999899
Q ss_pred hcCcccchhHHHHHHHhhh
Q 025282 181 DNAPVAKKTAWLGVFYMCL 199 (255)
Q Consensus 181 ~~~~~~~r~~~~~~~~~~~ 199 (255)
+....+..|..+|+.....
T Consensus 380 ~~L~~~~~aLvFGiNtfvA 398 (511)
T TIGR00806 380 SSLSKELCALVFGINTFVA 398 (511)
T ss_pred HHhcccceEEEEecHHHHH
Confidence 8888777788888776653
No 273
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.55 E-value=2.5 Score=37.75 Aligned_cols=121 Identities=7% Similarity=-0.014 Sum_probs=63.5
Q ss_pred cccccc--ccCCcchhHHHHH---HHHHHHHhHhhHHHhhhcccCchHHHHHHH-HHHHHHHHHHHHhh-----------
Q 025282 90 TGIQGD--FDLNNFQDGVLSS---AFMVGLLVASPIFASLARSVNPFRLIGVGL-TVWTLAVVGCGFSF----------- 152 (255)
Q Consensus 90 ~~~~~~--~~~s~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~-~~~~~~~~~~~~~~----------- 152 (255)
|.+.++ .+.|.+|.+.+.- -|.+=..=+.++=.....|+||||.-++-. .+.++..+..+..-
T Consensus 24 PflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~~~~d 103 (544)
T PF13000_consen 24 PFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFDGVDD 103 (544)
T ss_pred hhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhcccccch
Confidence 677776 6777777655422 222222233334445566899998765432 22222222222111
Q ss_pred -------------hHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhh
Q 025282 153 -------------SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG 210 (255)
Q Consensus 153 -------------~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 210 (255)
+...+....++.=+..+.--.+.-.+.-.+..+++++.+-.....+.++|..++..+-
T Consensus 104 ~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvF 174 (544)
T PF13000_consen 104 ALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVF 174 (544)
T ss_pred hhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHH
Confidence 0112222222222333344445556667777888888887777777777777666543
No 274
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=91.95 E-value=0.26 Score=41.67 Aligned_cols=124 Identities=12% Similarity=-0.012 Sum_probs=92.7
Q ss_pred cccc-ccccCCcchhH-HHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 90 TGIQ-GDFDLNNFQDG-VLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 90 ~~~~-~~~~~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
|++. .+.++++.+.. -+.-+..-.+.+.-++.=.+.|..--|++++.-.+.......+.-+.++.+.+-+..++.|..
T Consensus 29 pyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~ 108 (433)
T KOG3810|consen 29 PYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPA 108 (433)
T ss_pred hhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChH
Confidence 4444 34566655432 112222333445555666788988888888888888888888888999999999999998886
Q ss_pred hhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
.+. ..+-++++-+..+++++.++.+-.....-.|...|..++..+.
T Consensus 109 tAa-EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLv 154 (433)
T KOG3810|consen 109 TAA-EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLV 154 (433)
T ss_pred HHH-HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHh
Confidence 544 4567888888999999999999999988888888888888776
No 275
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.69 E-value=8.4 Score=33.51 Aligned_cols=37 Identities=16% Similarity=0.086 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhH
Q 025282 153 SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTA 190 (255)
Q Consensus 153 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~ 190 (255)
.+...++.-.+.+++.|..+.......++. |++.-..
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ytqa 152 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYTQA 152 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHHHH
Confidence 466666777788888888877777777765 4454433
No 276
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=91.42 E-value=8 Score=33.09 Aligned_cols=85 Identities=12% Similarity=0.119 Sum_probs=57.7
Q ss_pred cCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHH-------HHHHHH--hhhHHHHHHHHHHHHhh
Q 025282 97 DLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLA-------VVGCGF--SFSFWMIAICRMLVGVG 167 (255)
Q Consensus 97 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~l~G~~ 167 (255)
|-.--|.+.+.+.|..+..+|+...-++.|.--.-+.+..-.++..++ .+.+++ .++-+.+++..+++|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 445567888999999999999988888887644433333333332221 111121 24677888899999999
Q ss_pred hhhHhhhhHhhhhh
Q 025282 168 EASFISLAAPFIDD 181 (255)
Q Consensus 168 ~g~~~~~~~~~~~~ 181 (255)
.|.-.|+.+.++..
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999999888765
No 277
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=91.38 E-value=9.6 Score=33.60 Aligned_cols=133 Identities=14% Similarity=0.054 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHH------Hh--h----hHHHH---HHHHHHHHhhh
Q 025282 104 GVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG------FS--F----SFWMI---AICRMLVGVGE 168 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~------~~--~----~~~~~---~~~~~l~G~~~ 168 (255)
+...-.-.+..++.++..|.+.||..|.+++-.+.+.--++..+.+ +. . +.+.. ++.-.+.|...
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 120 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIE 120 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHH
Confidence 3334444556678889999999999999987777655433222211 11 1 11222 22222222211
Q ss_pred hhHhhhhHhh--hhhc----C--cccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHH
Q 025282 169 ASFISLAAPF--IDDN----A--PVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 169 g~~~~~~~~~--~~~~----~--~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
-. ...+..+ --|| . +++.+.+.++...-.=.+-.+++|++.|.+. ..+.+....+.++..++...+=+
T Consensus 121 ~L-as~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 121 RL-ASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred HH-HHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHH
Confidence 11 1122221 1233 2 2233444444443334456788999999988 78888888888887776665433
No 278
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=91.38 E-value=1.3 Score=37.28 Aligned_cols=73 Identities=8% Similarity=0.169 Sum_probs=54.6
Q ss_pred HHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCc
Q 025282 111 MVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAP 184 (255)
Q Consensus 111 ~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~ 184 (255)
.+..+..+++.+.+.+++|-|+.++++...+..... .-+-+.+..++.+-...|++.+..+..--+++.+...
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 344556666777999999999999888777655422 2334678889999999999999988877777766654
No 279
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=89.28 E-value=1 Score=39.49 Aligned_cols=128 Identities=12% Similarity=0.031 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcC
Q 025282 104 GVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNA 183 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~ 183 (255)
.|-..++.+...+.+...-++.+|+|-|+.+..+...+.++..+.++.++.+.....+-..|+-.+....+-...++++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 45566777778889999999999999777777777778888888888888888888888887655555444444433322
Q ss_pred cc-----------------------cchhHHHHHHHhhhhhhhhhhhhhhhhhc--cchhHHHHHHHHHHHHH
Q 025282 184 PV-----------------------AKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFP 231 (255)
Q Consensus 184 ~~-----------------------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~f~~~~~~~~~ 231 (255)
-. ..+|...|+.+....+.+++.....|.+. ..+-+..-++.+.+.+.
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~ 487 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALL 487 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHH
Confidence 11 12345555666666666665544444433 33444444444444333
No 280
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=88.98 E-value=3.5 Score=35.20 Aligned_cols=95 Identities=16% Similarity=0.049 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHhHhhHHHhhhcccCchHHH--HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhh
Q 025282 104 GVLSSAFMVGLLVASPIFASLARSVNPFRLI--GVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDD 181 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~ 181 (255)
|..-++..+..+++.+..|++.-++.|+.-+ .++.+.-+...++++-++++|..+++.++...-.....+++..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 5556677777789999999998887766333 34444445555566677899999999988888888888888888888
Q ss_pred cCcccchhHHHHHHHhh
Q 025282 182 NAPVAKKTAWLGVFYMC 198 (255)
Q Consensus 182 ~~~~~~r~~~~~~~~~~ 198 (255)
..+.+.-|..+|+....
T Consensus 354 nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV 370 (433)
T ss_pred hhhhhhheeeeehHHHH
Confidence 88888888888876654
No 281
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.06 E-value=1.7 Score=29.82 Aligned_cols=25 Identities=8% Similarity=-0.020 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhHhhHHHhhhccc
Q 025282 104 GVLSSAFMVGLLVASPIFASLARSV 128 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~g~l~dr~ 128 (255)
++-.+.=.++..+.....||+.|||
T Consensus 45 a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334455566667777889999986
No 282
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=86.76 E-value=13 Score=30.74 Aligned_cols=39 Identities=15% Similarity=0.100 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHhhhhhHhh
Q 025282 135 GVGLTVWTLAVVGCGFS-FSFWMIAICRMLVGVGEASFIS 173 (255)
Q Consensus 135 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~ 173 (255)
+.+++++++..++..+. ++.+.+.+.-++.+++.++...
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml~~ 42 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGMLGV 42 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 34445554444444444 4555555566666666555543
No 283
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=86.69 E-value=1.9 Score=36.09 Aligned_cols=133 Identities=11% Similarity=-0.044 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhc
Q 025282 103 DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDN 182 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~ 182 (255)
.|.+.-+-.+-..+..+.+..+.||+--..=+.+..++.+.+.++.+++++.++-+.+-.+..++.|.....-.++.+.+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY 143 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC
Confidence 34444455556667777778888885432223456677788888889999999888888888887777665555554433
Q ss_pred CcccchhHHHHHHHhhhhhhhhhhhhhhhhhc---cchhHHHHHHHHHHHHHHHHHHHHhc
Q 025282 183 APVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG---HYNWRYAFWGEAILMFPFAVLGFVMK 240 (255)
Q Consensus 183 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---~~~w~~~f~~~~~~~~~~~~~~~~~~ 240 (255)
- ....+.++++.+.++.+|..--..+. ...-|.+.++...+-.+.+...++..
T Consensus 144 ~-----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL 199 (409)
T KOG3880|consen 144 P-----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLL 199 (409)
T ss_pred C-----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhee
Confidence 2 23344445555555555554433333 34567777777666555555555543
No 284
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=86.55 E-value=20 Score=31.75 Aligned_cols=95 Identities=11% Similarity=-0.019 Sum_probs=50.2
Q ss_pred HHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHH-HHH-------hhhHHHHHHHHHHHHhhhhhHhhhhHhhhh
Q 025282 109 AFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVG-CGF-------SFSFWMIAICRMLVGVGEASFISLAAPFID 180 (255)
Q Consensus 109 ~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 180 (255)
...+...+..+..-.+..|+..|.=+..++++..+..++ ..+ ...++..++.-++.|++.+..+.....+.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 344444444555556666666433333343332222221 111 124666677778889998888888888877
Q ss_pred hcCcccchhHHHHHHHhhhhhhhhhhhh
Q 025282 181 DNAPVAKKTAWLGVFYMCLPSGYAIGYV 208 (255)
Q Consensus 181 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 208 (255)
.+|++ .++.+..+.+++++++.+
T Consensus 133 -~fp~~----~~~a~~~G~g~aGv~~s~ 155 (437)
T TIGR00939 133 -VFPST----YSSAVMSGQGLAGVLTSL 155 (437)
T ss_pred -cCCHH----HHHHHHhcchhHHHHHHH
Confidence 44544 334444444455444443
No 285
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=86.09 E-value=2.6 Score=35.33 Aligned_cols=105 Identities=10% Similarity=0.029 Sum_probs=72.7
Q ss_pred chhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHH-------HHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhh
Q 025282 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTV-------WTLAVVGCGFSFSFWMIAICRMLVGVGEASFIS 173 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~ 173 (255)
.|.-|....|.+|..+..--...+ -.+ .+..+.+ +.+.-....+.++++..++.-+.-|+-.|..+.
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~~----~~p--~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYV 361 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINLF----TMP--YLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYV 361 (409)
T ss_pred hcchhhheeeeeeEEEEeccceEE----ech--HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHH
Confidence 357788888888765543222111 112 2222222 223333456678999988889999999899998
Q ss_pred hhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhh
Q 025282 174 LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGG 211 (255)
Q Consensus 174 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 211 (255)
...--+.+-.++++|-.+++.....-.+|..++..++-
T Consensus 362 NTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 362 NTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 88888888888899999999998888888777665543
No 286
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=85.63 E-value=16 Score=29.85 Aligned_cols=91 Identities=14% Similarity=0.175 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHHHhHhhHHHhhhcc-cCchHHHH----HHHHHHHHHHHHHHH-h----hhHHHHHHHHHHHHhhhhhHh
Q 025282 103 DGVLSSAFMVGLLVASPIFASLARS-VNPFRLIG----VGLTVWTLAVVGCGF-S----FSFWMIAICRMLVGVGEASFI 172 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g~l~dr-~G~r~~~~----~~~~~~~~~~~~~~~-~----~~~~~~~~~~~l~G~~~g~~~ 172 (255)
......++.+|..+|.+..|.+... +.||+.+. .+.++..+..+.... . .+...+++.-++.|++.=+.+
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 3555667777788888888888874 55665544 223333333333211 1 146667777788887665555
Q ss_pred hhhHhhhhhcC--cccchhHHHH
Q 025282 173 SLAAPFIDDNA--PVAKKTAWLG 193 (255)
Q Consensus 173 ~~~~~~~~~~~--~~~~r~~~~~ 193 (255)
++...+--|.= +|++-|...|
T Consensus 223 ~ViL~lPhEyK~~~pk~ig~~Fg 245 (267)
T PF07672_consen 223 GVILNLPHEYKGYNPKKIGIQFG 245 (267)
T ss_pred HHHhcChhhhcCCCcceehhHHH
Confidence 55444444432 3344444433
No 287
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=83.14 E-value=28 Score=32.84 Aligned_cols=56 Identities=16% Similarity=0.220 Sum_probs=35.7
Q ss_pred hhHHHhhhcc----cCchHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhhhhHhh
Q 025282 118 SPIFASLARS----VNPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVGVGEASFIS 173 (255)
Q Consensus 118 ~~~~g~l~dr----~G~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~ 173 (255)
+.+++-++|. -||.+-++++.++++++.+...+.. ..+.+..+.++.+++.++...
T Consensus 40 G~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlga 100 (704)
T TIGR01666 40 GIIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLGA 100 (704)
T ss_pred HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 3444667775 4566777788888877777666554 555566666666666665544
No 288
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=83.12 E-value=28 Score=32.90 Aligned_cols=57 Identities=18% Similarity=0.236 Sum_probs=37.3
Q ss_pred hhHHHhhhcc----cCchHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhhhhHhhh
Q 025282 118 SPIFASLARS----VNPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVGVGEASFISL 174 (255)
Q Consensus 118 ~~~~g~l~dr----~G~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~ 174 (255)
+.+++-+.|. -||.+-++++.++++++.+...+.. ..+.+....++.+++.++....
T Consensus 40 G~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlga~ 101 (701)
T TIGR01667 40 GIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLGAL 101 (701)
T ss_pred hhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHh
Confidence 3445556665 3567778888888888887777654 4555556666677766665444
No 289
>PRK10263 DNA translocase FtsK; Provisional
Probab=82.74 E-value=16 Score=36.58 Aligned_cols=11 Identities=27% Similarity=0.274 Sum_probs=4.3
Q ss_pred hhhhhhhhhhh
Q 025282 202 GYAIGYVYGGW 212 (255)
Q Consensus 202 g~~~g~~~~~~ 212 (255)
|+++|..++..
T Consensus 143 GGIIG~lLs~l 153 (1355)
T PRK10263 143 GGVIGSLLSTT 153 (1355)
T ss_pred cchHHHHHHHH
Confidence 33444443333
No 290
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=80.85 E-value=38 Score=30.60 Aligned_cols=55 Identities=9% Similarity=0.013 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhh
Q 025282 157 IAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGG 211 (255)
Q Consensus 157 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 211 (255)
+++..++..+.....+...+++-+++.+|..-|++|.+.+...++|+---..+.-
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL 462 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVL 462 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHH
Confidence 3444567778888888999999999999999999999999999999876554443
No 291
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=80.49 E-value=44 Score=30.12 Aligned_cols=73 Identities=14% Similarity=0.132 Sum_probs=49.8
Q ss_pred HHHHhhhhhHhhhhHhhhhhcCcc-cchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHH
Q 025282 162 MLVGVGEASFISLAAPFIDDNAPV-AKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAV 234 (255)
Q Consensus 162 ~l~G~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~ 234 (255)
+..|+........--..+.+.+|. +++...+|-++...++-..+-..+++.+. ..||+..-.+.-++.++..+
T Consensus 290 i~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~ 364 (491)
T PF03219_consen 290 IAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGL 364 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHH
Confidence 445566666666666667777764 46778888777777776666667777777 88999888776665554443
No 292
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=79.14 E-value=28 Score=27.12 Aligned_cols=41 Identities=7% Similarity=0.048 Sum_probs=20.6
Q ss_pred HHHHHHHHHhHhhHHHhh---hcccCchHHHHHHHHHHHHHHHH
Q 025282 107 SSAFMVGLLVASPIFASL---ARSVNPFRLIGVGLTVWTLAVVG 147 (255)
Q Consensus 107 ~~~~~~~~~~~~~~~g~l---~dr~G~r~~~~~~~~~~~~~~~~ 147 (255)
......++.+|..+.+.+ .++..+|+.....+.+-.+..+.
T Consensus 52 ~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll~~ 95 (209)
T PF06912_consen 52 YLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILLLI 95 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH
Confidence 344455556666666666 23344445544444444443333
No 293
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=75.43 E-value=25 Score=32.95 Aligned_cols=84 Identities=15% Similarity=0.180 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHH
Q 025282 153 SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFP 231 (255)
Q Consensus 153 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~ 231 (255)
+.++.+.-.++.+++.........-+..+-.|++-|....+++.....+|.++...+...-. ..-|--.+...++..++
T Consensus 564 ~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (654)
T TIGR00926 564 SILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFENFSVQAAEFFLFASLMLVV 643 (654)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHH
Confidence 45666667788888888888888888889999999999999999999999888777665543 23333333333333333
Q ss_pred HHHHH
Q 025282 232 FAVLG 236 (255)
Q Consensus 232 ~~~~~ 236 (255)
+.++.
T Consensus 644 ~~~f~ 648 (654)
T TIGR00926 644 MAIFS 648 (654)
T ss_pred HHHHH
Confidence 33333
No 294
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=74.58 E-value=64 Score=28.91 Aligned_cols=70 Identities=16% Similarity=0.151 Sum_probs=51.3
Q ss_pred HHHHhhhhhHhhhhHhhhhhcCcc-cchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHH
Q 025282 162 MLVGVGEASFISLAAPFIDDNAPV-AKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFP 231 (255)
Q Consensus 162 ~l~G~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~ 231 (255)
++.|+........--..+.+.+|. ++|...+|-++...++..++..++++.+. ..||.....+..++.++
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 445666666666666777777764 47899999888888887766666667777 89999887776665554
No 295
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=72.49 E-value=4.2 Score=32.27 Aligned_cols=124 Identities=16% Similarity=0.182 Sum_probs=75.3
Q ss_pred HHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHH
Q 025282 59 LLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGL 138 (255)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~ 138 (255)
+...+.|-.++. |.+..+-|.+..+.|.||++..+.-=+.+.|.+|..+|.++.+.++.-+
T Consensus 106 llLGlkREaIGa---------t~SI~REp~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~---------- 166 (241)
T PF11299_consen 106 LLLGLKREAIGA---------TFSIGREPNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLL---------- 166 (241)
T ss_pred HHhcccHHhhcc---------eeecccCcceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHH----------
Confidence 455555655554 2344566777888899998877766666777778777777766554211
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhh
Q 025282 139 TVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (255)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (255)
..+. +-.=.+.-.-.|+|.|...+.+..-+.+.+| +......++....+.+..+.|-...-++
T Consensus 167 ---------a~~~--~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 167 ---------ASLG--IFHPYALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred ---------Hhcc--CCCHHHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0100 0001122344678888888888888888887 6666666666665555555554444333
No 296
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=72.12 E-value=18 Score=31.54 Aligned_cols=119 Identities=8% Similarity=-0.005 Sum_probs=71.8
Q ss_pred cccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHH------HHHHHHHHHHHHHHH-----------hhhHH
Q 025282 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIG------VGLTVWTLAVVGCGF-----------SFSFW 155 (255)
Q Consensus 93 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~------~~~~~~~~~~~~~~~-----------~~~~~ 155 (255)
.-|.|++.++.+++.-...-..++.+...|+++.. +|+... .=.+...+.+.+.-. ...+.
T Consensus 292 Lle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~--~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~ 369 (510)
T KOG3574|consen 292 LLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAG--PRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYY 369 (510)
T ss_pred HHHcCCChhHheeeeeehhhHHHhhhhhheeecCC--CCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechH
Confidence 45789998888777644444444444455544442 122111 111111111111111 11233
Q ss_pred H-HHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhh
Q 025282 156 M-IAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (255)
Q Consensus 156 ~-~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (255)
. .+....+.+......+...+++.+++.||..-|+.|.+.+...++|...-..+..++
T Consensus 370 il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l 428 (510)
T KOG3574|consen 370 ILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWL 428 (510)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHh
Confidence 3 333466777777788888999999999999999999999999999887655555554
No 297
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=70.45 E-value=14 Score=27.41 Aligned_cols=51 Identities=10% Similarity=0.094 Sum_probs=34.8
Q ss_pred hhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhh
Q 025282 152 FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI 205 (255)
Q Consensus 152 ~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 205 (255)
+++..++....+.|+|.- .+.+.+++--.++++-|..+|+-..-.+++.+.
T Consensus 95 P~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 345556555555555433 356777777888888999998888877776543
No 298
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=67.09 E-value=27 Score=24.06 Aligned_cols=43 Identities=19% Similarity=0.106 Sum_probs=28.9
Q ss_pred hhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHH
Q 025282 102 QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLA 144 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 144 (255)
..+.......++..++..+.+.+.|..|.+..+.+...+..+.
T Consensus 88 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 88 ALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 3456666777788888888888888887766655544444333
No 299
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=64.59 E-value=16 Score=25.14 Aligned_cols=49 Identities=22% Similarity=0.158 Sum_probs=39.8
Q ss_pred chhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHH
Q 025282 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG 149 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~ 149 (255)
+..|-..++|.-.+++.++++++..|+.-+-+.=.+|..++.++..+.-
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheE
Confidence 4568888999999999999999999999887777777777766655443
No 300
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=63.73 E-value=46 Score=24.56 Aligned_cols=25 Identities=24% Similarity=0.448 Sum_probs=20.6
Q ss_pred HHHHHHHHhHhhHHHhhhcccCchH
Q 025282 108 SAFMVGLLVASPIFASLARSVNPFR 132 (255)
Q Consensus 108 ~~~~~~~~~~~~~~g~l~dr~G~r~ 132 (255)
.-|.+++.+...+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 3567788899999999999988764
No 301
>COG2119 Predicted membrane protein [Function unknown]
Probab=63.71 E-value=65 Score=24.75 Aligned_cols=71 Identities=13% Similarity=0.087 Sum_probs=45.1
Q ss_pred HHHHHHHHhhhccccccccCCCCCCCCCCCCCCCcccccccccCCc-chhHHHHHHHHHHHHhHhhHHHhhhcccCchHH
Q 025282 55 CFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNN-FQDGVLSSAFMVGLLVASPIFASLARSVNPFRL 133 (255)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~ 133 (255)
...++....|++.+++. .+..+++... ...|.. ....++..++-+...++++|+..|.+
T Consensus 107 i~~FlaE~GDKTQiATI-------------------aLaA~~~~~~~V~~Gt~-lg~~l~s~laVl~G~~ia~ki~~r~l 166 (190)
T COG2119 107 ITFFLAELGDKTQIATI-------------------ALAADYHSPWAVFAGTT-LGMILASVLAVLLGKLIAGKLPERLL 166 (190)
T ss_pred HHHHHHHhccHHHHHHH-------------------HHhhcCCCceeeehhhH-HHHHHHHHHHHHHHHHHHccCCHHHH
Confidence 34555666777777652 4556666532 222332 23445666778888899999999998
Q ss_pred HHHHHHHHHHHH
Q 025282 134 IGVGLTVWTLAV 145 (255)
Q Consensus 134 ~~~~~~~~~~~~ 145 (255)
-.++.+++.+..
T Consensus 167 ~~~aallFl~fa 178 (190)
T COG2119 167 RFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHH
Confidence 887766665544
No 302
>PRK02237 hypothetical protein; Provisional
Probab=60.26 E-value=29 Score=24.02 Aligned_cols=47 Identities=15% Similarity=0.123 Sum_probs=38.5
Q ss_pred hhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHH
Q 025282 102 QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGC 148 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 148 (255)
..|-...+|.-.+++.++++++..|+.-+-+.=.+|..++.++..+.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 47888999999999999999999999988777777777766665544
No 303
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=59.98 E-value=63 Score=24.88 Aligned_cols=23 Identities=17% Similarity=0.551 Sum_probs=19.3
Q ss_pred HHHHHHHHhHhhHHHhhhcccCc
Q 025282 108 SAFMVGLLVASPIFASLARSVNP 130 (255)
Q Consensus 108 ~~~~~~~~~~~~~~g~l~dr~G~ 130 (255)
.-|.+++.++..+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 35677888999999999999875
No 304
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=57.58 E-value=32 Score=31.59 Aligned_cols=62 Identities=19% Similarity=0.179 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 153 SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 153 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
|..+++--.++.|++.........-+.-+-+|++-|+.+++++.....+|..+...+.....
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~ 518 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQ 518 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777788899999999999999999999999999999999999999999999988876555
No 305
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=56.66 E-value=1.4e+02 Score=26.39 Aligned_cols=63 Identities=13% Similarity=0.150 Sum_probs=37.7
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHH
Q 025282 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLG 193 (255)
Q Consensus 127 r~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~ 193 (255)
|+.+-..+++|+.+...-.++.+++.+...-.+-- ++...+..+...++.-....++|+..++
T Consensus 322 ~iHpiQY~LVGlAl~lFYlLLLSlSEhi~F~~AYl----iAa~a~i~Li~~Y~~~vl~~~k~~~~~~ 384 (430)
T PF06123_consen 322 RIHPIQYLLVGLALVLFYLLLLSLSEHIGFNLAYL----IAALACIGLISLYLSSVLKSWKRGLIFA 384 (430)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHH----HHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 34455557788888888888888887654333322 2223333445566666666667766554
No 306
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=56.24 E-value=56 Score=21.58 Aligned_cols=62 Identities=18% Similarity=0.238 Sum_probs=35.6
Q ss_pred HHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHH
Q 025282 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAIL 228 (255)
Q Consensus 164 ~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~ 228 (255)
.|++--...|..+.++.|.--.. ...+...+.+.+|..+|.+....+. +...+..+....+.
T Consensus 4 mGigRFayTplLP~M~~~~~ls~---~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~ 66 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSL---SQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLL 66 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 35555556677777776654322 3344556666777777777777665 44444444444333
No 307
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=54.16 E-value=1.6e+02 Score=26.23 Aligned_cols=99 Identities=8% Similarity=-0.148 Sum_probs=65.6
Q ss_pred ccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHhhh
Q 025282 92 IQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF---SFWMIAICRMLVGVGE 168 (255)
Q Consensus 92 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~~ 168 (255)
+....+++.++...+.++-.+...++.++--.-..++|-|.....+.....++.+...... .....+.+-+..|+..
T Consensus 40 vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~ 119 (451)
T COG2233 40 VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVY 119 (451)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH
Confidence 3567899999999999999999999988877644456666666666555555554444332 3666666666666655
Q ss_pred hhHhhhhHhhhhhcCcccchhH
Q 025282 169 ASFISLAAPFIDDNAPVAKKTA 190 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~r~~ 190 (255)
-...+.....+.+.+||-.-|.
T Consensus 120 ~li~~~~~~~l~rlfPPvVtG~ 141 (451)
T COG2233 120 FLISPIVKIRLARLFPPVVTGP 141 (451)
T ss_pred HHHHHHHHHHHHHhCCCceEEe
Confidence 5443333327778888765543
No 308
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=50.53 E-value=1.4e+02 Score=24.62 Aligned_cols=57 Identities=12% Similarity=0.082 Sum_probs=31.9
Q ss_pred HHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 157 IAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 157 ~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
.-..|.+.|+-. ..+..+++++.-.||.+++--..--.....+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455687777754 344667888888888554322222222333334455566655554
No 309
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=50.16 E-value=84 Score=21.78 Aligned_cols=48 Identities=10% Similarity=0.039 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcc
Q 025282 138 LTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPV 185 (255)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~ 185 (255)
+++..+++++.++......---.|.+.+.|.-+.++.-.++..|...-
T Consensus 33 l~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 33 LIANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHhhHccccccHHHHHHHHHHH
Confidence 344455555554432211001123344444445556667777766653
No 310
>PRK11715 inner membrane protein; Provisional
Probab=48.58 E-value=2e+02 Score=25.60 Aligned_cols=63 Identities=11% Similarity=0.126 Sum_probs=37.4
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHH
Q 025282 128 VNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGV 194 (255)
Q Consensus 128 ~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~ 194 (255)
+.+-..+++|+.+...-.++.+++.+...-.+.-+ +...+......++.-.....+||..++.
T Consensus 329 iHpiQYlLVGlAl~lFYLLLLSlSEHigF~~AYli----Aa~a~v~li~~Y~~~vl~~~k~g~~~~~ 391 (436)
T PRK11715 329 IHPVQYLLVGLALVLFYLLLLSLSEHIGFTLAYLI----AALACVLLIGFYLSAVLRSWKRGLLFAA 391 (436)
T ss_pred ecHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHH----HHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 44555577888888888888888876544333321 2222333445566666666777666543
No 311
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=48.03 E-value=61 Score=19.57 Aligned_cols=38 Identities=24% Similarity=0.234 Sum_probs=23.5
Q ss_pred hhhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHH
Q 025282 200 PSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 200 ~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
-+|.++|...+.... .++++....+..+++++..++..
T Consensus 12 il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 346666666665555 67777776666666655555544
No 312
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=48.02 E-value=57 Score=19.24 Aligned_cols=34 Identities=3% Similarity=-0.114 Sum_probs=20.0
Q ss_pred HHHHHHHHhHhhHHHhhhcc-cCchHHHHHHHHHH
Q 025282 108 SAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVW 141 (255)
Q Consensus 108 ~~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~ 141 (255)
....+..++.....|+..|+ ++.++...+..++.
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~ll 41 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLL 41 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 34455566677778888885 66645544443333
No 313
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=47.06 E-value=1.7e+02 Score=24.45 Aligned_cols=53 Identities=11% Similarity=-0.027 Sum_probs=28.2
Q ss_pred cccccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcc---cCchHHHHHHHHHHHHHHHHHH
Q 025282 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS---VNPFRLIGVGLTVWTLAVVGCG 149 (255)
Q Consensus 91 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~G~r~~~~~~~~~~~~~~~~~~ 149 (255)
-+.+.++...+..++..+.. +..++.+-.++ ||.||.=+++.+..++..+..+
T Consensus 50 LLADa~Hml~D~~al~lal~------A~~~a~r~~~~~~TfGy~R~eiLaa~~nav~Li~~s 105 (296)
T COG1230 50 LLADALHMLSDALALLLALI------AIKLARRPATKRFTFGYKRLEILAAFLNALLLIVVS 105 (296)
T ss_pred HHHhHHHHHHHHHHHHHHHH------HHHHhcCCCCCCCCccHhHHHHHHHHHHHHHHHHHH
Confidence 45555665555444444332 22333344443 7888877777666665555444
No 314
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=46.81 E-value=96 Score=21.49 Aligned_cols=68 Identities=6% Similarity=0.072 Sum_probs=40.2
Q ss_pred hHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhhhhHhhhhHhhhhhcC
Q 025282 116 VASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVGVGEASFISLAAPFIDDNA 183 (255)
Q Consensus 116 ~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~ 183 (255)
+..-..-+.+|.+.|+...+...+..+++..+.+.+- +.+.=.+--+-.|+|..........+-.|-.
T Consensus 15 V~~~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l 83 (106)
T COG2076 15 VVGTTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESL 83 (106)
T ss_pred HHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 3444555888888888888877777777777766653 3333333444455555554444444444443
No 315
>PLN02776 prenyltransferase
Probab=46.28 E-value=1.9e+02 Score=24.75 Aligned_cols=25 Identities=8% Similarity=-0.007 Sum_probs=14.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhh
Q 025282 129 NPFRLIGVGLTVWTLAVVGCGFSFS 153 (255)
Q Consensus 129 G~r~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
.++..+.++.++..++..+..+..|
T Consensus 74 s~~~A~~~~~~l~~~g~~~l~~~~n 98 (341)
T PLN02776 74 SVPHAVAWAVVVGAAGVALLAYKTN 98 (341)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556666777766666655444334
No 316
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=44.04 E-value=28 Score=28.42 Aligned_cols=54 Identities=17% Similarity=0.134 Sum_probs=34.6
Q ss_pred cchhHHHHHHHhhhhhhhhhhh--hhhh---hhc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 186 AKKTAWLGVFYMCLPSGYAIGY--VYGG---WVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 186 ~~r~~~~~~~~~~~~~g~~~g~--~~~~---~l~-~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
|+|+....+...+.++|.++.. .+.+ .-. ..+|++.+.+.+++.++-+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555666666667777776543 2222 111 5679999999988877766666655
No 317
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=41.79 E-value=48 Score=22.86 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=22.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhccCcc
Q 025282 215 HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (255)
Q Consensus 215 ~~~w~~~f~~~~~~~~~~~~~~~~~~p~~~ 244 (255)
..+|+.+|++...++++.+.+.+.+.|+..
T Consensus 56 ~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 56 WEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 568999998877777777777777778653
No 318
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=35.96 E-value=3.4e+02 Score=24.66 Aligned_cols=76 Identities=18% Similarity=0.152 Sum_probs=51.1
Q ss_pred HHHHhhhhhHhhhhHhhhhhcCcc-cchhHHHHHHHhhhhhh-hhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHH
Q 025282 162 MLVGVGEASFISLAAPFIDDNAPV-AKKTAWLGVFYMCLPSG-YAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 162 ~l~G~~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~~~ 237 (255)
...|++.......--+-+.+.+|. +++...+|-++...++- .++.-.+++.+. ..||-+.-.+.-++.++..++++
T Consensus 292 l~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~lFF 370 (509)
T COG3202 292 LAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVLFF 370 (509)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 344555555666656667777775 36888888887777776 444556677777 88999887777776666554443
No 319
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=35.85 E-value=90 Score=18.01 Aligned_cols=35 Identities=14% Similarity=0.082 Sum_probs=16.5
Q ss_pred hhhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHH
Q 025282 201 SGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVL 235 (255)
Q Consensus 201 ~g~~~g~~~~~~l~-~~~w~~~f~~~~~~~~~~~~~ 235 (255)
+|+.+|..+.+.+. ..++.+.-++.+++..+..+.
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~ 41 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLF 41 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHH
Confidence 34555555555444 334444444555554444333
No 320
>COG4769 Predicted membrane protein [Function unknown]
Probab=35.41 E-value=1.2e+02 Score=22.86 Aligned_cols=53 Identities=17% Similarity=0.218 Sum_probs=33.7
Q ss_pred HHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 025282 109 AFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (255)
Q Consensus 109 ~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 167 (255)
++.+...+.+...-++..++|+|..-.+|... .-++.+|..++++++++.+-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhcc
Confidence 34444455566666788888888764444332 235677888888888776643
No 321
>PRK03818 putative transporter; Validated
Probab=34.22 E-value=3.8e+02 Score=24.70 Aligned_cols=80 Identities=11% Similarity=0.060 Sum_probs=38.9
Q ss_pred hhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhhhhHhhhhHhhhh
Q 025282 102 QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVGVGEASFISLAAPFID 180 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 180 (255)
+.|+...++.+|.-.|.-+..-+.+..|.+..+ ++.++..+..++..... ...-+-..+.+-.++.+...+.....+.
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~ 514 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWIG-YGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFAN 514 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHh
Confidence 356666666666666666666655556665544 44444443333333221 1111112222223444445556666666
Q ss_pred hc
Q 025282 181 DN 182 (255)
Q Consensus 181 ~~ 182 (255)
|.
T Consensus 515 ~~ 516 (552)
T PRK03818 515 NL 516 (552)
T ss_pred cc
Confidence 64
No 322
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=32.25 E-value=4.8e+02 Score=25.35 Aligned_cols=29 Identities=10% Similarity=-0.110 Sum_probs=16.8
Q ss_pred chhHHHHHHHHHHHHhHhhHHHhhhcccC
Q 025282 101 FQDGVLSSAFMVGLLVASPIFASLARSVN 129 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G 129 (255)
+..-+...+......+.+++..++.+|..
T Consensus 9 ~~~~l~~~~lG~~lll~~l~s~~lkeRl~ 37 (810)
T TIGR00844 9 TKAHVAYSCVGIFSSIFSLVSLFVKEKLY 37 (810)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 33444555555555566666667776654
No 323
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=31.95 E-value=1.7e+02 Score=21.38 Aligned_cols=24 Identities=8% Similarity=-0.033 Sum_probs=18.1
Q ss_pred hhhcCcccchhHHHHHHHhhhhhh
Q 025282 179 IDDNAPVAKKTAWLGVFYMCLPSG 202 (255)
Q Consensus 179 ~~~~~~~~~r~~~~~~~~~~~~~g 202 (255)
+.|++|+..|....+.+.......
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHH
Confidence 469999999988887776655443
No 324
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=31.53 E-value=2.4e+02 Score=21.62 Aligned_cols=61 Identities=8% Similarity=0.012 Sum_probs=31.7
Q ss_pred hhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHH
Q 025282 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMF 230 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~ 230 (255)
+.......+++.+..|+++|.++.-+--.+-.+-..+.-..+.++.+. |++..++.|++.+
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~-~~~i~~igG~~Ll 71 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI-FPWILLIGGLFLL 71 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 445556667777788988776665433222222223333334444322 3556666665543
No 325
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=31.12 E-value=2.9e+02 Score=22.42 Aligned_cols=53 Identities=17% Similarity=0.189 Sum_probs=30.0
Q ss_pred HHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhh
Q 025282 149 GFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI 205 (255)
Q Consensus 149 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 205 (255)
.++.|...++.+-+..|+..... ...-..++..| +|+....+...++..|..+
T Consensus 29 ~LS~s~~FyY~sg~~lGv~~s~l--i~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~ 81 (249)
T PF10225_consen 29 SLSRSVLFYYSSGISLGVLASLL--ILLFQLSKLLP--RKSMFYAVLYGGWSFGLYF 81 (249)
T ss_pred HhccChhHHHhhhHHHHHHHHHH--HHHHHHHHHcc--CcchhHHHHhhhhHHHHHH
Confidence 34567777777777777754332 34445678888 3444444444444554433
No 326
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=30.56 E-value=1.4e+02 Score=21.96 Aligned_cols=23 Identities=9% Similarity=0.031 Sum_probs=17.1
Q ss_pred hhhcCcccchhHHHHHHHhhhhh
Q 025282 179 IDDNAPVAKKTAWLGVFYMCLPS 201 (255)
Q Consensus 179 ~~~~~~~~~r~~~~~~~~~~~~~ 201 (255)
+.|++|+..|...-..+......
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s~ 80 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTNF 80 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHH
Confidence 46999999998877776665443
No 327
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=30.55 E-value=3.7e+02 Score=23.45 Aligned_cols=97 Identities=12% Similarity=-0.084 Sum_probs=58.8
Q ss_pred ccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHhhhhhHh
Q 025282 94 GDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG-FSFSFWMIAICRMLVGVGEASFI 172 (255)
Q Consensus 94 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~G~~~g~~~ 172 (255)
+..|++.++...+.+...+...++.++-.+-.-++|-|..+..+.....+...... ....+.....+-++.|+..-...
T Consensus 21 ~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~illg 100 (406)
T TIGR03173 21 GALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVILLA 100 (406)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 44688888877777887788888887765333356767666655544333332222 22355556666666666544433
Q ss_pred hhhHhhhhhcCcccchhHH
Q 025282 173 SLAAPFIDDNAPVAKKTAW 191 (255)
Q Consensus 173 ~~~~~~~~~~~~~~~r~~~ 191 (255)
.....+.+.+|+.-.|..
T Consensus 101 -~~~~~l~~~iPp~v~G~~ 118 (406)
T TIGR03173 101 -PFFSKLVRFFPPVVTGTV 118 (406)
T ss_pred -HHHHHHHHHCCcHHHHHH
Confidence 355567888887665543
No 328
>PTZ00370 STEVOR; Provisional
Probab=30.45 E-value=2.3e+02 Score=23.54 Aligned_cols=32 Identities=16% Similarity=0.109 Sum_probs=13.3
Q ss_pred chhHHHHHHHHHHHHHHHHHH-HHhccCccccc
Q 025282 216 YNWRYAFWGEAILMFPFAVLG-FVMKPLQLKGA 247 (255)
Q Consensus 216 ~~w~~~f~~~~~~~~~~~~~~-~~~~p~~~~~~ 247 (255)
..|-..-++..++.++..++. |+.+++...|.
T Consensus 255 ~Pygiaalvllil~vvliilYiwlyrrRK~swk 287 (296)
T PTZ00370 255 YPYGIAALVLLILAVVLIILYIWLYRRRKNSWK 287 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 444444444444444444333 33334333443
No 329
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=29.19 E-value=2.7e+02 Score=21.59 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=22.7
Q ss_pred ccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 185 VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 185 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
.++.+++.++.-.+..+|.++|..+..++.
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~ 165 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLP 165 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 356677887777777888888888877775
No 330
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=28.55 E-value=4.1e+02 Score=23.33 Aligned_cols=97 Identities=10% Similarity=-0.052 Sum_probs=56.0
Q ss_pred cccccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHH-HHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhH
Q 025282 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLT-VWTLAVVGCGFSFSFWMIAICRMLVGVGEASF 171 (255)
Q Consensus 93 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~ 171 (255)
.... +++++...+.+...+...++.++-+....+. -|.....+.. .+....+......++.....+-++.|+.....
T Consensus 30 ~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll 107 (415)
T TIGR00801 30 GLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLVYTLL 107 (415)
T ss_pred hccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 3445 7888889999999999999999988877654 1222222222 22111111222234555555566666555444
Q ss_pred hhh----hHhhhhhcCcccchhHH
Q 025282 172 ISL----AAPFIDDNAPVAKKTAW 191 (255)
Q Consensus 172 ~~~----~~~~~~~~~~~~~r~~~ 191 (255)
... ...++.+.+|+.-.+..
T Consensus 108 ~~~~~~~~~~~i~~~~Pp~v~g~i 131 (415)
T TIGR00801 108 SLLIKKLGPRWLMKLFPPVVTGPV 131 (415)
T ss_pred HHHHHHhhHHHHHhcCCchhHHHh
Confidence 322 23456788888877763
No 331
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=28.09 E-value=2.4e+02 Score=23.97 Aligned_cols=62 Identities=11% Similarity=0.041 Sum_probs=44.6
Q ss_pred ccccccccCC-cch----hHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh
Q 025282 90 TGIQGDFDLN-NFQ----DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS 151 (255)
Q Consensus 90 ~~~~~~~~~s-~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~ 151 (255)
|...++++-+ +.+ ..|.....++|..++..+.+++.|++|....+.+..+...++.+.+...
T Consensus 56 ~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 56 PFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 3455556533 222 3567778888888888999999999999998888888887777766553
No 332
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=27.44 E-value=4.5e+02 Score=23.53 Aligned_cols=29 Identities=14% Similarity=-0.063 Sum_probs=16.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 025282 130 PFRLIGVGLTVWTLAVVGCGFSFSFWMIA 158 (255)
Q Consensus 130 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (255)
.|+...-.++-+.++.+.-++..++....
T Consensus 340 ~~~~~~~~~~t~~~sa~WHG~~~gYyl~f 368 (465)
T PLN02332 340 KKPGFFQLLATQTVSAVWHGLYPGYILFF 368 (465)
T ss_pred cchhHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 33434334455556667777776665544
No 333
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=27.37 E-value=5.4e+02 Score=24.38 Aligned_cols=62 Identities=19% Similarity=-0.004 Sum_probs=31.1
Q ss_pred hHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHh------hh---HHHHHHHHHHHHhhhhhHhhhhHh
Q 025282 116 VASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS------FS---FWMIAICRMLVGVGEASFISLAAP 177 (255)
Q Consensus 116 ~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~l~G~~~g~~~~~~~~ 177 (255)
+.++-...+..+..||..++...+..++..++..++ .+ .....+.-++.|++.+........
T Consensus 385 ~s~~~~~~~l~~~s~rs~i~~~g~~~~~~~m~~~l~l~~~~~~~~~~~~~~~~~~flsGl~s~il~iGllP 455 (700)
T COG1480 385 LSSFSALVLLRKMSRRSDILKSGLFLALMNMLLLLSLIFAFTLSWYDALQDAIFAFLSGLLSGILVLGLLP 455 (700)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444455566677777766666555554443332 12 222334455666665554333333
No 334
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=27.34 E-value=4e+02 Score=22.91 Aligned_cols=105 Identities=12% Similarity=0.096 Sum_probs=56.2
Q ss_pred hHhhHHHhhhcccCchHHHHHHHHHHH---HHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCccc-chhHH
Q 025282 116 VASPIFASLARSVNPFRLIGVGLTVWT---LAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVA-KKTAW 191 (255)
Q Consensus 116 ~~~~~~g~l~dr~G~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~-~r~~~ 191 (255)
+-.++.+++.+.+|.-+.++.+.++.. --.+...++.|......+-.+.|.-.|....-.....-...+++ ++-.+
T Consensus 61 ~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVaLgii~k~D~~y~a 140 (354)
T PF04346_consen 61 FLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVALGIIEKEDHKYLA 140 (354)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhhhhhcChhhhHHHH
Confidence 344566777788888888877766643 23344556667777777767777666655443344444444433 33344
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhccchhHHHH
Q 025282 192 LGVFYMCLPSGYAIGYVYGGWVGHYNWRYAF 222 (255)
Q Consensus 192 ~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f 222 (255)
.|+.... +..-+|-++++.+...++...+
T Consensus 141 ~Gil~Gi--itIPiG~~vggl~~g~~~~~il 169 (354)
T PF04346_consen 141 KGILAGI--ITIPIGCFVGGLIAGFDIGMIL 169 (354)
T ss_pred HHHHHHH--hhhCHHHHHHHHHHhCCHHHHH
Confidence 4443322 2223444444444333444333
No 335
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=27.21 E-value=3e+02 Score=21.39 Aligned_cols=18 Identities=22% Similarity=0.217 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 025282 222 FWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 222 f~~~~~~~~~~~~~~~~~ 239 (255)
.++..+++++...+-+++
T Consensus 180 ~~~~iiig~i~~~~~~~l 197 (206)
T PF06570_consen 180 PWVYIIIGVIAFALRFYL 197 (206)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444444444444444
No 336
>COG5547 Small integral membrane protein [Function unknown]
Probab=26.96 E-value=1.5e+02 Score=17.91 Aligned_cols=38 Identities=26% Similarity=0.200 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhh
Q 025282 133 LIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (255)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~ 170 (255)
.++.+++...++.++..+.---..+++...+.|++.|.
T Consensus 10 pIIgglvglliAili~t~GfwKtilviil~~lGv~iGl 47 (62)
T COG5547 10 PIIGGLVGLLIAILILTFGFWKTILVIILILLGVYIGL 47 (62)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444333332222344444555555554
No 337
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=26.80 E-value=2.8e+02 Score=20.94 Aligned_cols=80 Identities=16% Similarity=0.076 Sum_probs=43.5
Q ss_pred chhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh-hhhhHhhhhHhhh
Q 025282 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV-GEASFISLAAPFI 179 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~-~~g~~~~~~~~~~ 179 (255)
.+.++...++.+|.-.+.-+..-+.+. |-|. +..+.++..+..+.......+..=+=.-...|. +.+...+......
T Consensus 56 ~~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~~-~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~G~~aGa~T~tp~L~~A 133 (169)
T PF06826_consen 56 RQLGLALFLAAVGLSAGPGFFSSLKRG-GLKL-LLLGVIITLVPLLIALVIGRYLFKLNPGIAAGILAGALTSTPALAAA 133 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccccCcHHHHHH
Confidence 367888888888888888777777655 5544 345555554444443332221110111123343 3334455666666
Q ss_pred hhc
Q 025282 180 DDN 182 (255)
Q Consensus 180 ~~~ 182 (255)
.|.
T Consensus 134 ~~~ 136 (169)
T PF06826_consen 134 QEA 136 (169)
T ss_pred HHh
Confidence 777
No 338
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=26.58 E-value=1.7e+02 Score=18.33 Aligned_cols=31 Identities=10% Similarity=0.085 Sum_probs=15.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCccccc
Q 025282 217 NWRYAFWGEAILMFPFAVLGFVMKPLQLKGA 247 (255)
Q Consensus 217 ~w~~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 247 (255)
||-..+++...+.++..-.+-.+.||+.+..
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~~a 59 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSRQA 59 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCSS-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhcccC
Confidence 4555555554444444444445568765543
No 339
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=26.36 E-value=4.7e+02 Score=24.11 Aligned_cols=41 Identities=17% Similarity=0.180 Sum_probs=22.5
Q ss_pred hhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHH
Q 025282 102 QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLA 144 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 144 (255)
+.|+...++.+|...|.-+..-+.+ .|-+.. +++.+++.+.
T Consensus 451 ~~GL~lFla~vG~~aG~~f~~~l~~-~G~~~~-~~g~~~~~~~ 491 (562)
T TIGR03802 451 DLGLALFIAVVGLSAGPQAVTAIKE-MGLTLF-LLGIVVTILP 491 (562)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHHH-HHHHHHHHHH
Confidence 3566666666777666666665533 444443 3444444443
No 340
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=26.22 E-value=2.6e+02 Score=24.60 Aligned_cols=49 Identities=10% Similarity=0.099 Sum_probs=29.4
Q ss_pred HHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhh
Q 025282 162 MLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG 210 (255)
Q Consensus 162 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 210 (255)
++.|+..|........++.+...-++---+..++..+..+|.++.++..
T Consensus 283 ~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 283 IIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 3445544554444444455566556655677777777777777666554
No 341
>COG4177 LivM ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]
Probab=25.83 E-value=4.1e+02 Score=22.44 Aligned_cols=60 Identities=10% Similarity=0.075 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhc
Q 025282 154 FWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (255)
Q Consensus 154 ~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (255)
...+.++-++.|++.+..-.-......|.+. -..+...=+.....+.|...||.++..+.
T Consensus 208 l~aF~isa~~AGiAGaL~a~~~~~v~p~~f~-~~~S~~~l~~vvlGG~Gt~~G~v~Ga~l~ 267 (314)
T COG4177 208 LLAFVISAAIAGIAGALYALYLGFVSPESFS-FTLSIEVLAMVVLGGAGTLFGALLGAVLV 267 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhceeChhhcc-HHHHHHHHHHHHHcCccccHHHHHHHHHH
Confidence 3456666777777655443333333334443 23333344455556778889998888775
No 342
>PRK10666 ammonium transporter; Provisional
Probab=25.65 E-value=3.7e+02 Score=23.85 Aligned_cols=49 Identities=14% Similarity=0.193 Sum_probs=26.6
Q ss_pred HHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhh
Q 025282 162 MLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG 210 (255)
Q Consensus 162 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 210 (255)
++.|+-.|........++.+.+.-++---+..++..+..+|.++.++.+
T Consensus 307 ~iiG~vag~v~~~~~~~l~~~~~iDD~~~a~~vHgv~Gi~G~l~~glfa 355 (428)
T PRK10666 307 LIIGVVAGLAGLWGVTMLKRWLRVDDPCDVFGVHGVCGIVGCILTGIFA 355 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcCccHhhhHhHHHHHHHHHHhh
Confidence 3445444544444444454445445555666777776666666555443
No 343
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=25.16 E-value=1.4e+02 Score=23.83 Aligned_cols=31 Identities=13% Similarity=-0.023 Sum_probs=15.4
Q ss_pred hhhhhhhhhhhhc--cchhHHHHHHHHHHHHHH
Q 025282 202 GYAIGYVYGGWVG--HYNWRYAFWGEAILMFPF 232 (255)
Q Consensus 202 g~~~g~~~~~~l~--~~~w~~~f~~~~~~~~~~ 232 (255)
+.++++++.+.+. ..++.|.+.+.+++..+.
T Consensus 33 ~a~l~~~~v~v~ig~l~~~~~~~~i~gi~~g~l 65 (224)
T PF13829_consen 33 GAFLGPIAVFVLIGLLFGSWWYWLIIGILLGLL 65 (224)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 4444444444333 345556666666654433
No 344
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=24.85 E-value=1.2e+02 Score=19.99 Aligned_cols=23 Identities=17% Similarity=0.196 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc
Q 025282 218 WRYAFWGEAILMFPFAVLGFVMK 240 (255)
Q Consensus 218 w~~~f~~~~~~~~~~~~~~~~~~ 240 (255)
-|+..++.+++-+++.+.+.+..
T Consensus 22 lRYGLf~GAIFQliCilAiI~~~ 44 (85)
T PF06783_consen 22 LRYGLFVGAIFQLICILAIILPI 44 (85)
T ss_pred HHHHHHHHHHHHHHHHHheeeec
Confidence 37778888888877766655543
No 345
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=24.39 E-value=4.6e+02 Score=22.59 Aligned_cols=101 Identities=19% Similarity=0.149 Sum_probs=58.1
Q ss_pred HHHHhHhhHHHhhhccc--CchHHHHHHHHHHHHHHHHHHHh--hh-------------HH--HHHHH---H-HHHHhhh
Q 025282 112 VGLLVASPIFASLARSV--NPFRLIGVGLTVWTLAVVGCGFS--FS-------------FW--MIAIC---R-MLVGVGE 168 (255)
Q Consensus 112 ~~~~~~~~~~g~l~dr~--G~r~~~~~~~~~~~~~~~~~~~~--~~-------------~~--~~~~~---~-~l~G~~~ 168 (255)
+..+.+++++-.+.|.. |++..+..+..+..++.++.... .| .. .-.+. | .+.|+.+
T Consensus 174 ~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~q 253 (354)
T PF05631_consen 174 VVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQ 253 (354)
T ss_pred HHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHH
Confidence 34455566666777765 46777877777777766654421 11 11 01111 1 3678888
Q ss_pred hhHhhhhHhhhhhcCcccc---hhHHHHHHHhhhhhhhhhhhhhhhh
Q 025282 169 ASFISLAAPFIDDNAPVAK---KTAWLGVFYMCLPSGYAIGYVYGGW 212 (255)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~ 212 (255)
+......+.++-.|.|.-+ +..=.|+...+.....++|..+...
T Consensus 254 slFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~ 300 (354)
T PF05631_consen 254 SLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSR 300 (354)
T ss_pred HHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888887533 3333444444444445555544433
No 346
>PF13334 DUF4094: Domain of unknown function (DUF4094)
Probab=23.29 E-value=1.1e+02 Score=20.72 Aligned_cols=19 Identities=0% Similarity=-0.055 Sum_probs=12.1
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 025282 130 PFRLIGVGLTVWTLAVVGC 148 (255)
Q Consensus 130 ~r~~~~~~~~~~~~~~~~~ 148 (255)
+|++++++++.+++|.++.
T Consensus 2 ~kw~l~Lc~~SF~~G~lft 20 (95)
T PF13334_consen 2 RKWVLLLCIASFCAGMLFT 20 (95)
T ss_pred chHHHHHHHHHHHHHHHHh
Confidence 5677777766666665543
No 347
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=23.28 E-value=1.3e+02 Score=15.91 Aligned_cols=20 Identities=25% Similarity=0.242 Sum_probs=13.7
Q ss_pred HHHHHHHHhHhhHHHhhhcc
Q 025282 108 SAFMVGLLVASPIFASLARS 127 (255)
Q Consensus 108 ~~~~~~~~~~~~~~g~l~dr 127 (255)
.+..++.++.+++.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 45566667777777877665
No 348
>PRK10457 hypothetical protein; Provisional
Probab=23.15 E-value=2.3e+02 Score=18.57 Aligned_cols=16 Identities=19% Similarity=0.179 Sum_probs=9.1
Q ss_pred hhhhhhhhhhhhhhhc
Q 025282 199 LPSGYAIGYVYGGWVG 214 (255)
Q Consensus 199 ~~~g~~~g~~~~~~l~ 214 (255)
.-+|..+|..+...+.
T Consensus 36 GiiGA~iGg~l~~~~g 51 (82)
T PRK10457 36 GIVGAVVGGWISTFFG 51 (82)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 3456666666655543
No 349
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=22.82 E-value=2.8e+02 Score=19.55 Aligned_cols=48 Identities=10% Similarity=-0.042 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCc
Q 025282 137 GLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAP 184 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~ 184 (255)
.+++..+++++.++......---.|.+.+.|.-+.++.-.++..|...
T Consensus 36 Tl~VNi~GsfllG~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~e~~~ 83 (119)
T PRK14230 36 NLFANWTGALLIGIFAETVNHPQWKLLLITGFLGSLTTLSGFSLETVT 83 (119)
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHhchHhhHHHHHHHHHH
Confidence 344555555555544321100012444444444445566666666654
No 350
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=22.22 E-value=4.6e+02 Score=22.87 Aligned_cols=49 Identities=8% Similarity=0.083 Sum_probs=30.0
Q ss_pred HHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhh
Q 025282 162 MLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG 210 (255)
Q Consensus 162 ~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 210 (255)
++.|+..|........++.+...-++---+..++..+..+|.+..++..
T Consensus 278 ~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 326 (399)
T PF00909_consen 278 LLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLFA 326 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHHC
T ss_pred HHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHHHHHh
Confidence 4455555555444444566666666666788888887777777665554
No 351
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=22.14 E-value=2e+02 Score=18.38 Aligned_cols=30 Identities=7% Similarity=-0.022 Sum_probs=20.7
Q ss_pred hcccCchHHHHHHHHHHHHHHHHHHHhhhH
Q 025282 125 ARSVNPFRLIGVGLTVWTLAVVGCGFSFSF 154 (255)
Q Consensus 125 ~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
-|+-.|++-+.+.+.+-..+.++..+....
T Consensus 11 ~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~ 40 (73)
T PF11298_consen 11 QDQRRRRRRYLIMMGIRIPCFVLAAVVYRL 40 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 355667777877777777777776666554
No 352
>PRK14214 camphor resistance protein CrcB; Provisional
Probab=22.05 E-value=2.9e+02 Score=19.42 Aligned_cols=49 Identities=12% Similarity=0.101 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhhcCcc
Q 025282 137 GLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPV 185 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~~~~~ 185 (255)
.+++..+++++.++......---.|.+.+.|.-+.++.-.++..|...-
T Consensus 38 Tl~vNv~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l 86 (118)
T PRK14214 38 TFFINITGSFLLGFLVSSALGPVWQLFLGTGFMGGYTTFSTFKVESMEL 86 (118)
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHcccchhHHHHHHHHHHH
Confidence 3455566666665543221101124444444444455666666666643
No 353
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=21.50 E-value=2.5e+02 Score=18.39 Aligned_cols=32 Identities=16% Similarity=0.288 Sum_probs=18.9
Q ss_pred hhhhhhhhhhc---cchhHHHHHHHHHHHHHHHHH
Q 025282 204 AIGYVYGGWVG---HYNWRYAFWGEAILMFPFAVL 235 (255)
Q Consensus 204 ~~g~~~~~~l~---~~~w~~~f~~~~~~~~~~~~~ 235 (255)
.+|++.+..+. ..||...|++.+=-+++..++
T Consensus 27 g~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fvi 61 (81)
T PF13937_consen 27 GVGILFADELNQITFGGFPLGFWFAAQGSIIVFVI 61 (81)
T ss_pred HHHHHHHHHHcCCeeCCCChHHHHHHHhHHHHHHH
Confidence 34455555553 468888888866555444443
No 354
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=21.47 E-value=9.8e+02 Score=25.28 Aligned_cols=17 Identities=12% Similarity=0.225 Sum_probs=10.8
Q ss_pred HHHHhHhhHHHhhhccc
Q 025282 112 VGLLVASPIFASLARSV 128 (255)
Q Consensus 112 ~~~~~~~~~~g~l~dr~ 128 (255)
+...+...+.|.+.|.+
T Consensus 74 ~~~p~~~~i~g~iid~~ 90 (1466)
T PTZ00265 74 GTLPFFVSVFGVIMKNM 90 (1466)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34445556777777865
No 355
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=21.35 E-value=2.8e+02 Score=18.98 Aligned_cols=31 Identities=0% Similarity=-0.267 Sum_probs=16.6
Q ss_pred HHHHhHhhHHHhhhcc-cCchHHHHHHHHHHH
Q 025282 112 VGLLVASPIFASLARS-VNPFRLIGVGLTVWT 142 (255)
Q Consensus 112 ~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~ 142 (255)
+.-.+.+.+.|...|+ ++-+..+.+.+++.+
T Consensus 53 v~pil~G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 3344556666777775 665554444444333
No 356
>COG1289 Predicted membrane protein [Function unknown]
Probab=21.35 E-value=4.2e+02 Score=25.01 Aligned_cols=36 Identities=8% Similarity=-0.058 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhH
Q 025282 134 IGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASF 171 (255)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~ 171 (255)
++++++.+.++.++....-+..++++ .+.++..+.+
T Consensus 62 li~tlig~~~~~~~~~~~~~~p~~f~--~~~~~~~~l~ 97 (674)
T COG1289 62 LIGTLIGFAVALLLVALLAQEPWLFL--LLLTLWLGLC 97 (674)
T ss_pred HHHHHHHHHHHHHHHHHHccCcHHHH--HHHHHHHHHH
Confidence 44555555555555544433333333 4444444444
No 357
>PRK04972 putative transporter; Provisional
Probab=21.26 E-value=6.6e+02 Score=23.20 Aligned_cols=110 Identities=13% Similarity=-0.013 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHhhhhHhhhhh
Q 025282 102 QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDD 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~~ 181 (255)
+.++...++.+|.-.|.-++.-+.+ .-.+..+++.+...++.+.......+.-+=.....-.++.+...+.......|
T Consensus 63 ~~gl~lF~~~vG~~~Gp~F~~~l~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aGa~T~tp~l~~a~~ 140 (558)
T PRK04972 63 NLGFMLFIFCVGVEAGPNFFSIFFR--DGKNYLMLALVMVGSALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGD 140 (558)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccccCcHHHHHHHH
Q ss_pred cCcc------------cchhHHHHHHHhhhhhhhhhhhhhhhhh
Q 025282 182 NAPV------------AKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (255)
Q Consensus 182 ~~~~------------~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (255)
.... ++-..++++.+....++.++-..+...+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~vgYa~~y~~g~i~~i~~~~~~p~l 184 (558)
T PRK04972 141 TLRHSGAESRQLSLALDNLSLGYALTYLIGLVSLIVGARYLPKL 184 (558)
T ss_pred HHhccCccccchhcccCccchhHHhHHHHHHHHHHHHHHHHHHH
No 358
>TIGR03716 R_switched_YkoY integral membrane protein, YkoY family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains proteins YceF and YkoY from Bacillus subtilis. A transport function is proposed.
Probab=21.19 E-value=4.2e+02 Score=20.96 Aligned_cols=25 Identities=12% Similarity=0.024 Sum_probs=16.0
Q ss_pred hHhhhhHhhhhhcCcccchhHHHHH
Q 025282 170 SFISLAAPFIDDNAPVAKKTAWLGV 194 (255)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~r~~~~~~ 194 (255)
.......+++.+..|+++|.++.-+
T Consensus 9 ~DN~~via~~~~~LP~~~r~~al~~ 33 (215)
T TIGR03716 9 ADNALVLAVMVKHLPEKQRKKALFY 33 (215)
T ss_pred hhHHHHHHHHHhhCCHHHHHHHHHH
Confidence 3444555666667888887776654
No 359
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=21.08 E-value=3.9e+02 Score=20.48 Aligned_cols=55 Identities=13% Similarity=0.140 Sum_probs=36.4
Q ss_pred HHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 025282 109 AFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (255)
Q Consensus 109 ~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 166 (255)
...+...+++++.-.+..|.++|-.+.+-.++.++..++.+ +.|...+..++.|+
T Consensus 36 ~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G---~~~~~~~~~iv~gl 90 (186)
T PF09605_consen 36 MPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG---HGWPMLIVCIVGGL 90 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHH
Confidence 34455567777888899999999998877777776655443 22444444444444
No 360
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=21.00 E-value=2.4e+02 Score=20.04 Aligned_cols=42 Identities=17% Similarity=0.138 Sum_probs=19.0
Q ss_pred chhHHHHHHHhhhhhhhhhhhhhhhhhc-cchhHHHHHHHHHH
Q 025282 187 KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAIL 228 (255)
Q Consensus 187 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~f~~~~~~ 228 (255)
.||....=......+|.++|-+++-.+. ..+|-.+....+++
T Consensus 18 ~rGlT~~El~~~a~~~~~~g~~~gl~la~~~g~~a~~pt~~ll 60 (121)
T PF11990_consen 18 FRGLTADELGLAAGVGFVAGLVVGLPLALLTGWWAMIPTGALL 60 (121)
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444334444445555544444444 45664433333333
No 361
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=20.90 E-value=2.6e+02 Score=18.44 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=25.8
Q ss_pred HHHhHhhHHHhhhcccCc-------hHHHHHHHHHHHHHHHHHHHhhh
Q 025282 113 GLLVASPIFASLARSVNP-------FRLIGVGLTVWTLAVVGCGFSFS 153 (255)
Q Consensus 113 ~~~~~~~~~g~l~dr~G~-------r~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
+...+.+.++++.+|..+ ++.+..+.++...+.++++..++
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 334555666677776554 66777777777777776666544
No 362
>PRK11715 inner membrane protein; Provisional
Probab=20.81 E-value=6.1e+02 Score=22.63 Aligned_cols=71 Identities=20% Similarity=0.238 Sum_probs=32.6
Q ss_pred HHHHHhhhhhHhhhhHhhhhhcCcccchhHHHHHHHhhhhhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 025282 161 RMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVM 239 (255)
Q Consensus 161 ~~l~G~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~f~~~~~~~~~~~~~~~~~ 239 (255)
..+.|++...++-+..++ +| +-|...+..-.....-..++-.+... ..+||....+.+.+..+-.++..++
T Consensus 334 YlLVGlAl~lFYLLLLSl-SE-----HigF~~AYliAa~a~v~li~~Y~~~v--l~~~k~g~~~~~~L~~LYg~Ly~lL 404 (436)
T PRK11715 334 YLLVGLALVLFYLLLLSL-SE-----HIGFTLAYLIAALACVLLIGFYLSAV--LRSWKRGLLFAAALAALYGVLYGLL 404 (436)
T ss_pred HHHHHHHHHHHHHHHHHH-Hh-----hhchHHHHHHHHHHHHHHHHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHHH
Confidence 456666666665443332 33 33344433333222222222222222 3577777666666655544444433
No 363
>PRK10692 hypothetical protein; Provisional
Probab=20.66 E-value=2.7e+02 Score=18.49 Aligned_cols=17 Identities=18% Similarity=0.071 Sum_probs=8.8
Q ss_pred chHHHHHHHHHHHHHHH
Q 025282 130 PFRLIGVGLTVWTLAVV 146 (255)
Q Consensus 130 ~r~~~~~~~~~~~~~~~ 146 (255)
||...++|-++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (92)
T PRK10692 3 RKNASLLGNVLMGLGLV 19 (92)
T ss_pred chhhHHHhhHHHHHHHH
Confidence 44555555555555544
No 364
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=20.40 E-value=2.3e+02 Score=24.60 Aligned_cols=95 Identities=12% Similarity=-0.065 Sum_probs=43.0
Q ss_pred cccCCcchhHHHHHHHHHHHHhHhhHHHhhhcccCchHHHHHHHHHHHHHHHHHH------HhhhHHHHHHHHHHHHhhh
Q 025282 95 DFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG------FSFSFWMIAICRMLVGVGE 168 (255)
Q Consensus 95 ~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~G~~~ 168 (255)
.+|. ..+...+.+...+...++.++-+. +.|.|..+.-+.....+...... ...++.....+-++.|+..
T Consensus 28 ~~g~-~~~~~~li~at~l~sgi~Tllq~~---~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g~~~i~gi~~ 103 (389)
T PF00860_consen 28 AFGL-DADTAALISATFLVSGIATLLQGL---PAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALGAVLISGILF 103 (389)
T ss_dssp ------------HHHHHHHHHHHHHHHHH---HTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHHHHHHHHHHH
T ss_pred cccc-cchhhHHHHHHHHHHHHHHHHHHh---cCCCceecccccchhhhhhhhcccccccchhhchhhhhhHHHHHHHHH
Confidence 3466 445556777777777888888887 66766666655544444422222 1235555666666666654
Q ss_pred hhHhhhhH-hhhhhcCcccchhHHHH
Q 025282 169 ASFISLAA-PFIDDNAPVAKKTAWLG 193 (255)
Q Consensus 169 g~~~~~~~-~~~~~~~~~~~r~~~~~ 193 (255)
-....... ..+.+++|+..++....
T Consensus 104 ~~l~~~g~~~~l~~~~pp~v~g~v~~ 129 (389)
T PF00860_consen 104 ILLGLTGLRKRLRRLFPPVVKGAVVL 129 (389)
T ss_dssp HHHHTT-SH-HHHHH--HHHHHHHHH
T ss_pred HHHHHhchHHHHHHHhChhheEeeEe
Confidence 44332222 36778888776655443
No 365
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.08 E-value=3.2e+02 Score=19.08 Aligned_cols=52 Identities=13% Similarity=-0.066 Sum_probs=23.3
Q ss_pred cchhHHHHHHHhhhhhhhh-hhhhhhhhhc-cch-hHHHHHHHHHHHHHHHHHHH
Q 025282 186 AKKTAWLGVFYMCLPSGYA-IGYVYGGWVG-HYN-WRYAFWGEAILMFPFAVLGF 237 (255)
Q Consensus 186 ~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~-~~~-w~~~f~~~~~~~~~~~~~~~ 237 (255)
+.++.+.++--+.=.++.+ +|..++-++- ..| =.|..++..++++...++..
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv 92 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNV 92 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 4566666655444444443 4444433332 222 23444445445444444443
Done!