Query 025286
Match_columns 255
No_of_seqs 71 out of 73
Neff 3.4
Searched_HMMs 13730
Date Mon Mar 25 07:18:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025286.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025286hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2d7ma1 b.1.18.10 (A:8-109) Fi 19.0 1.3E+02 0.0095 20.3 6.2 78 66-147 2-85 (102)
2 d1x8da1 d.58.4.21 (A:1-104) L- 16.5 11 0.00079 27.1 -0.6 40 89-130 39-78 (104)
3 d2di8a1 b.1.18.10 (A:8-105) Fi 14.6 1.7E+02 0.012 19.6 5.6 72 67-141 3-77 (98)
4 d2diaa1 b.1.18.10 (A:8-107) Fi 14.4 1.6E+02 0.011 19.5 5.3 77 66-146 2-82 (100)
5 d2nqca1 b.1.18.10 (A:2482-2578 11.2 2.1E+02 0.016 18.9 5.3 72 66-140 2-75 (97)
6 d1vjta2 d.162.1.2 (A:192-469) 10.0 2.2E+02 0.016 22.4 5.7 51 134-186 186-250 (278)
7 d1ddga1 b.43.4.1 (A:226-446) S 8.9 99 0.0072 23.8 2.9 38 68-108 143-182 (221)
8 d1f20a1 b.43.4.1 (A:963-1232) 8.8 94 0.0068 24.9 2.8 30 80-109 202-233 (270)
9 d1wida_ b.142.1.2 (A:) DNA-bin 8.2 68 0.0049 22.3 1.5 24 92-115 10-33 (117)
10 d1wiba_ d.47.1.1 (A:) 60S ribo 7.6 1.5E+02 0.011 21.1 3.1 28 60-88 6-36 (92)
No 1
>d2d7ma1 b.1.18.10 (A:8-109) Filamin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.01 E-value=1.3e+02 Score=20.30 Aligned_cols=78 Identities=18% Similarity=0.228 Sum_probs=44.6
Q ss_pred CCCCcceEEEecCCCCCCCC--CCCceeeeccCCc-CcceEEEE-ehhcchhhhccccccce-EEEEEE-ecCCeeEEEE
Q 025286 66 FEASKLKVVFLGEGMNDYSR--ILPRTYILSHCDF-TANLTLTI-SNVINLEQLRGWYIKDD-VVAEWK-KVRDDMCLHV 139 (255)
Q Consensus 66 Fnp~KLsV~f~~~~~t~~~P--iipRrYTLTHsD~-T~~LfLtI-g~~fn~dql~~w~~RDE-VlAEW~-~~~g~~~LhV 139 (255)
+||+|.+|. |.|+.+..- -.|-.+|+.=.|- -++|...| |.+=..-..+-..++|- ...+|. +..|.|.++|
T Consensus 2 ~D~skv~v~--G~Gl~~~~v~~g~~~~F~Vd~~~aG~g~l~v~i~~p~g~~~~~~v~~~~dg~y~v~y~P~~~G~h~i~V 79 (102)
T d2d7ma1 2 HDASKVRAS--GPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITI 79 (102)
T ss_dssp CCGGGEEEE--SSTTCSSCEESSSCEEEEEEESSSCSSCEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEE
T ss_pred CCCCeeEEE--CCCcCcCCccCCCeEEEEEEeCCCCCCcEEEEEEeCCCCEeeeEEEeCCCcEEEEEEEECCCEeEEEEE
Confidence 789998886 677755432 2356788854554 67888877 33222112221134554 567886 4556777766
Q ss_pred EEEEeCCC
Q 025286 140 HCYVSGPS 147 (255)
Q Consensus 140 yc~VsG~~ 147 (255)
. .+|.+
T Consensus 80 ~--~~g~~ 85 (102)
T d2d7ma1 80 K--YGGDE 85 (102)
T ss_dssp E--ESSCB
T ss_pred E--ECCEE
Confidence 5 44543
No 2
>d1x8da1 d.58.4.21 (A:1-104) L-rhamnose mutarotase YiiL {Escherichia coli [TaxId: 562]}
Probab=16.49 E-value=11 Score=27.13 Aligned_cols=40 Identities=15% Similarity=0.122 Sum_probs=32.0
Q ss_pred ceeeeccCCcCcceEEEEehhcchhhhccccccceEEEEEEe
Q 025286 89 RTYILSHCDFTANLTLTISNVINLEQLRGWYIKDDVVAEWKK 130 (255)
Q Consensus 89 RrYTLTHsD~T~~LfLtIg~~fn~dql~~w~~RDEVlAEW~~ 130 (255)
|.||+-+.+.+.-||--++.++..+ +.. ...++|..||-+
T Consensus 39 ~nysIf~~~~~~~Lf~y~e~~~~~~-~~~-~a~~~~~~~W~~ 78 (104)
T d1x8da1 39 HNYAIYLDKARNLLFAMVEIESEER-WNA-VASTDVCQRWWK 78 (104)
T ss_dssp EEEEEEEETTTTEEEEEEEESCHHH-HHH-GGGSHHHHHHHH
T ss_pred eEEEEEEECCCCEEEEEEEECcHHh-HHH-hhCChHHHHHHH
Confidence 7899999999999999999888655 332 457999999964
No 3
>d2di8a1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.63 E-value=1.7e+02 Score=19.59 Aligned_cols=72 Identities=14% Similarity=0.216 Sum_probs=42.0
Q ss_pred CCCcceEEEecCCCCCCCCCCCceeeeccCCc-CcceEEEEehhcchhhhccccccce-EEEEEE-ecCCeeEEEEEE
Q 025286 67 EASKLKVVFLGEGMNDYSRILPRTYILSHCDF-TANLTLTISNVINLEQLRGWYIKDD-VVAEWK-KVRDDMCLHVHC 141 (255)
Q Consensus 67 np~KLsV~f~~~~~t~~~PiipRrYTLTHsD~-T~~LfLtIg~~fn~dql~~w~~RDE-VlAEW~-~~~g~~~LhVyc 141 (255)
||+|..|. |.++....--.+-.+|+.=.|. .|+|...|-.- +...++-..+.|- ...++. ...|.|.++|.+
T Consensus 3 D~skv~v~--G~Gl~~~~vg~~~~F~V~~~~aG~g~l~v~i~gp-~~~~v~v~~~~dg~y~v~y~P~~~G~y~i~V~~ 77 (98)
T d2di8a1 3 DARRAKVY--GRGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGP-SKVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKF 77 (98)
T ss_dssp CGGGCEEE--ESTTTEEETTCCEEEEEECTTTCBCCEEEEEESS-SCCCEECCBCTTSCEEEEECCCSCSEEEEEEEE
T ss_pred CCCeeEEE--CCCcCceECCCCEEEEEEeCCCCCCceEEEEEeC-CCceEEEEECCCCEEEEEEEECCCceEEEEEEE
Confidence 67887774 5666654444556677765554 67888888532 1112222134454 457886 555777777654
No 4
>d2diaa1 b.1.18.10 (A:8-107) Filamin b {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.36 E-value=1.6e+02 Score=19.52 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=44.4
Q ss_pred CCCCcceEEEecCCCCCCCCCCCceeeeccCCc-CcceEEEEehhcch-hhhccccccc-eEEEEEE-ecCCeeEEEEEE
Q 025286 66 FEASKLKVVFLGEGMNDYSRILPRTYILSHCDF-TANLTLTISNVINL-EQLRGWYIKD-DVVAEWK-KVRDDMCLHVHC 141 (255)
Q Consensus 66 Fnp~KLsV~f~~~~~t~~~PiipRrYTLTHsD~-T~~LfLtIg~~fn~-dql~~w~~RD-EVlAEW~-~~~g~~~LhVyc 141 (255)
+||+|..|. |.|+....--.+-..++.=.|. -++|...|-..-.. -.++-+.++| ....+|. +..|.+.++|.
T Consensus 2 ~Dpskv~v~--G~Gl~~~~vg~~~~f~V~~~~ag~~~l~v~i~~~~g~~~~~~v~~~~dg~y~v~y~P~~~G~h~i~V~- 78 (100)
T d2diaa1 2 FDPSKVVAS--GPGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMK- 78 (100)
T ss_dssp CCGGGEEEE--SGGGTCEETTCCCCEEEEESSCCSCCEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEE-
T ss_pred CCcCceEEE--CCccCcEeCCCeEEEEEEeCCCCCCcEEEEEEeCCCCEeeEEEEECCCCEEEEEEEeCcCccEEEEEE-
Confidence 789999885 5666544333456777766665 46777766543211 1222223444 5677886 44466666665
Q ss_pred EEeCC
Q 025286 142 YVSGP 146 (255)
Q Consensus 142 ~VsG~ 146 (255)
++|.
T Consensus 79 -~~g~ 82 (100)
T d2diaa1 79 -YGGE 82 (100)
T ss_dssp -ETTE
T ss_pred -ECCE
Confidence 4443
No 5
>d2nqca1 b.1.18.10 (A:2482-2578) Filamin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.16 E-value=2.1e+02 Score=18.87 Aligned_cols=72 Identities=13% Similarity=0.190 Sum_probs=39.8
Q ss_pred CCCCcceEEEecCCCCCCCCCCCceeeeccCCc-CcceEEEEehhcchhhhccccccceEEEEEE-ecCCeeEEEEE
Q 025286 66 FEASKLKVVFLGEGMNDYSRILPRTYILSHCDF-TANLTLTISNVINLEQLRGWYIKDDVVAEWK-KVRDDMCLHVH 140 (255)
Q Consensus 66 Fnp~KLsV~f~~~~~t~~~PiipRrYTLTHsD~-T~~LfLtIg~~fn~dql~~w~~RDEVlAEW~-~~~g~~~LhVy 140 (255)
.||+|.++. |.|+....--.+-.+|+.=+|. .++|...|-..=. ..+....+.|-...+|. +..|.+.++|.
T Consensus 2 ~D~skv~~~--G~GL~~~~vg~~~~F~V~~~~ag~~~l~v~v~~p~~-~~~~~~~~~~~y~v~y~P~~~G~h~i~V~ 75 (97)
T d2nqca1 2 GDPGLVSAY--GPGLEGGTTGVSSEFIVNTLNAGSGALSVTIDGPSK-VQLDCRECPEGHVVTYTPMAPGNYLIAIK 75 (97)
T ss_dssp CCGGGCEEE--SGGGTEEETTSCEEEEEECTTSCSCCEEEEEESSSC-CEEEEEEETTEEEEEEECCSCEEEEEEEE
T ss_pred CCCCccEEE--CCCcCcccCCCcEEEEEEcCCCCCCceEEEEEcCCC-ceEEEEECCCcEEEEEEeCCCEeEEEEEE
Confidence 578887776 6666543323445566654444 6788887754322 22222123455667776 44466666654
No 6
>d1vjta2 d.162.1.2 (A:192-469) Putative alpha-glucosidase TM0752 {Thermotoga maritima [TaxId: 2336]}
Probab=9.95 E-value=2.2e+02 Score=22.38 Aligned_cols=51 Identities=18% Similarity=0.214 Sum_probs=31.5
Q ss_pred eeEEEEEEEEeCC--------CcchhhHHH--HHHHHHHhhhhhhHHHHHhcchhh----hccCccc
Q 025286 134 DMCLHVHCYVSGP--------SLLRDLAAE--FRYHIFTKEMPLVLKAVLHGDSML----FRENPEL 186 (255)
Q Consensus 134 ~~~LhVyc~VsG~--------~~~~~~~a~--~Ry~IFrkELPLaLkAI~yGDr~l----F~~~PeL 186 (255)
+.+.-|=|.|++. ....+..+. ++..|=+.| |+++|++.||+.+ |..||--
T Consensus 186 davVEVpc~Vd~~Gi~P~~vg~~~p~~~~~~~l~~~v~~~e--L~veAa~~gd~~~a~~Al~~~Plv 250 (278)
T d1vjta2 186 DVVMELPVWVDCCGIHREKVEPDLTHRIKIFYLWPRILRME--WNLEAYISRDRKVLEEILIRDPRT 250 (278)
T ss_dssp SSEEEEEEEEETTEEEECCCCSCCCHHHHHHTHHHHHHHHH--HHHHHHHHTCHHHHHHHHHTCTTC
T ss_pred hhheEeEEEEeCCceeeeecCCCChHHHHHHHHHHHHHHHH--HHHHHHHhCCHHHHHHHHHhCCCC
Confidence 5678899999963 111111111 345553445 6899999999986 4445543
No 7
>d1ddga1 b.43.4.1 (A:226-446) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]}
Probab=8.89 E-value=99 Score=23.78 Aligned_cols=38 Identities=18% Similarity=0.347 Sum_probs=25.9
Q ss_pred CCcceEEEecCCCCCCCCCCCceeeeccCC--cCcceEEEEeh
Q 025286 68 ASKLKVVFLGEGMNDYSRILPRTYILSHCD--FTANLTLTISN 108 (255)
Q Consensus 68 p~KLsV~f~~~~~t~~~PiipRrYTLTHsD--~T~~LfLtIg~ 108 (255)
+-|+.++++ +.-.+|+.||-|++.=|- .-+++-|+|+.
T Consensus 143 ~~~~pl~~l---l~~lp~l~PR~YSIsSSp~~~p~~i~ltv~v 182 (221)
T d1ddga1 143 PAQLDAEAL---INLLRPLTPRLYSIASSQAEVENEVHVTVGV 182 (221)
T ss_dssp CCCCCHHHH---HHHSCBCCCEEEEBCCCTTTSCSEEEEEEEE
T ss_pred cCCCCHHHH---HHhhhccCceeeeeccccccCCCeeeEEEEE
Confidence 445555554 445689999999998665 34567777765
No 8
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=8.77 E-value=94 Score=24.92 Aligned_cols=30 Identities=27% Similarity=0.382 Sum_probs=21.9
Q ss_pred CCCCCCCCCceeeeccCCcC--cceEEEEehh
Q 025286 80 MNDYSRILPRTYILSHCDFT--ANLTLTISNV 109 (255)
Q Consensus 80 ~t~~~PiipRrYTLTHsD~T--~~LfLtIg~~ 109 (255)
+.-.+|+.||-|++.=|-.. +++-|+|+..
T Consensus 202 l~~lp~L~PR~YSIsSSp~~~p~~v~Ltv~vV 233 (270)
T d1f20a1 202 LTQLSLLQPRYYSISSSPDMYPDEVHLTVAIV 233 (270)
T ss_dssp HHHSCBCCCEEEECCSCTTTSTTEEEEEEECC
T ss_pred HHhccccccceeEEecCccCCCCEEEEEEEEE
Confidence 44467899999999866543 6777777753
No 9
>d1wida_ b.142.1.2 (A:) DNA-binding protein RAV1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=8.24 E-value=68 Score=22.29 Aligned_cols=24 Identities=13% Similarity=0.070 Sum_probs=19.7
Q ss_pred eeccCCcCcceEEEEehhcchhhh
Q 025286 92 ILSHCDFTANLTLTISNVINLEQL 115 (255)
Q Consensus 92 TLTHsD~T~~LfLtIg~~fn~dql 115 (255)
+||+||++..-.|.|-..++.+.+
T Consensus 10 ~Lt~sDv~~~~rL~iP~~~~~~~l 33 (117)
T d1wida_ 10 AVTPSDVGKLNRLVIPKHHAEKHF 33 (117)
T ss_dssp ECCTTTTSSSCCEEECHHHHTTTS
T ss_pred EecchhcCCCCEEEECHHHHHHhC
Confidence 799999977667999988887655
No 10
>d1wiba_ d.47.1.1 (A:) 60S ribosomal protein L12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=7.56 E-value=1.5e+02 Score=21.05 Aligned_cols=28 Identities=36% Similarity=0.751 Sum_probs=17.6
Q ss_pred hCCCCCCCCCcceEEE---ecCCCCCCCCCCC
Q 025286 60 LGPPASFEASKLKVVF---LGEGMNDYSRILP 88 (255)
Q Consensus 60 lgpp~~Fnp~KLsV~f---~~~~~t~~~Piip 88 (255)
.+|| +|||+-..+.. .|...++.+|+-|
T Consensus 6 ~~pp-K~dp~~v~~Ikl~v~gG~A~p~PplgP 36 (92)
T d1wiba_ 6 SGPP-KFDPNEVKVVYLRCTGGEVGATSALAP 36 (92)
T ss_dssp CCCC-CCCSSSCEEEEEEEETTCCCCSSCSHH
T ss_pred CCCC-CCCCCceEEEEEEEecCccCCCCCccc
Confidence 4665 99998555443 3455677666644
Done!