Query 025288
Match_columns 255
No_of_seqs 116 out of 1123
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 07:21:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025288.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025288hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2iq1_A Protein phosphatase 2C 100.0 2.1E-47 7.2E-52 316.9 28.2 247 4-254 7-262 (274)
2 2p8e_A PPM1B beta isoform vari 100.0 3.2E-47 1.1E-51 320.6 27.0 246 3-254 22-298 (307)
3 3qn1_B Protein phosphatase 2C 100.0 1.9E-47 6.6E-52 325.5 24.9 247 5-254 14-328 (337)
4 3kdj_B Protein phosphatase 2C 100.0 1.9E-47 6.6E-52 323.1 22.6 248 1-254 5-305 (316)
5 4da1_A Protein phosphatase 1K, 100.0 2.6E-46 8.8E-51 324.1 27.7 247 4-254 121-376 (389)
6 2i0o_A Ser/Thr phosphatase; be 100.0 3E-46 1E-50 314.3 25.6 245 3-254 21-304 (304)
7 1a6q_A Phosphatase 2C; catalyt 100.0 1.1E-45 3.7E-50 318.8 27.4 246 3-254 20-292 (382)
8 2isn_A NYSGXRC-8828Z, phosphat 100.0 1.8E-44 6.1E-49 309.5 27.7 244 3-254 11-333 (364)
9 2i44_A Serine-threonine phosph 100.0 2.5E-44 8.4E-49 305.3 25.5 249 3-255 20-322 (324)
10 1txo_A Putative bacterial enzy 100.0 4.8E-44 1.7E-48 290.7 25.7 233 1-255 1-237 (237)
11 2pk0_A Serine/threonine protei 100.0 7.8E-44 2.7E-48 291.8 23.9 237 3-254 4-246 (250)
12 3d8k_A PP2C, protein phosphata 100.0 1.3E-43 4.5E-48 305.1 22.2 241 4-254 12-324 (377)
13 2j82_A TPPHA, protein serine-t 100.0 6.7E-43 2.3E-47 284.5 22.6 231 5-253 1-240 (240)
14 2irm_A Mitogen-activated prote 100.0 3.3E-43 1.1E-47 301.8 20.4 236 10-254 25-356 (358)
15 2j4o_A Mitogen-activated prote 100.0 1.1E-43 3.7E-48 308.5 16.8 246 4-254 26-366 (401)
16 2jfr_A Ser-Thr phosphatase MSP 100.0 1.9E-42 6.5E-47 280.8 22.9 227 1-253 2-233 (234)
17 2pnq_A [pyruvate dehydrogenase 100.0 2.8E-40 9.6E-45 291.1 21.9 246 7-254 39-455 (467)
18 3rnr_A Stage II sporulation E 100.0 3.4E-38 1.1E-42 251.8 14.2 197 33-253 7-211 (211)
19 3pu9_A Protein serine/threonin 99.9 3.7E-24 1.3E-28 174.0 23.3 205 1-254 7-224 (242)
20 3t91_A Stage II sporulation pr 99.9 6.6E-25 2.2E-29 178.4 15.5 204 2-254 5-220 (242)
21 3zt9_A Serine phosphatase; hyd 99.9 6.8E-21 2.3E-25 149.4 21.4 189 4-252 3-193 (193)
22 3f79_A Probable two-component 99.8 1E-19 3.6E-24 148.8 19.4 201 5-254 38-253 (255)
23 3ke6_A Protein RV1364C/MT1410; 99.5 5.2E-12 1.8E-16 109.5 24.5 198 5-254 36-257 (399)
24 3eq2_A Probable two-component 99.2 5.5E-10 1.9E-14 96.5 17.9 187 19-254 189-392 (394)
25 3c4z_A Rhodopsin kinase; Ser/T 42.9 0.67 2.3E-05 41.3 -5.7 74 168-249 43-126 (543)
26 2ww6_A Fibritin, T4 fibritin; 33.3 33 0.0011 16.7 2.0 16 119-134 9-24 (27)
27 2nz7_A NOD1, caspase recruitme 30.9 69 0.0024 21.1 4.1 31 210-241 41-71 (98)
28 4e9m_A Nucleotide-binding olig 30.4 68 0.0023 22.8 4.1 31 210-241 55-85 (144)
29 1apy_B Aspartylglucosaminidase 25.9 1.6E+02 0.0055 20.9 5.5 43 210-252 61-103 (141)
30 1dgn_A Iceberg (protease inhib 25.8 1E+02 0.0035 19.7 4.2 33 209-241 32-64 (89)
31 3uhf_A Glutamate racemase; str 21.2 99 0.0034 24.6 4.1 24 37-60 25-49 (274)
32 2drn_C 24-residues peptide fro 21.1 82 0.0028 15.0 2.5 16 225-240 2-17 (26)
No 1
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-47 Score=316.91 Aligned_cols=247 Identities=30% Similarity=0.440 Sum_probs=209.8
Q ss_pred ceeeeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHH
Q 025288 4 HITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMT 83 (255)
Q Consensus 4 ~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 83 (255)
.+++|..|++|.|+ .|||++++.. ...+..+|+|||||||..+|+++++.+.+.+.+......++...|+++|..+
T Consensus 7 ~~~~g~~s~~G~R~-~nED~~~~~~---~~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~~ 82 (274)
T 2iq1_A 7 LENVGCASQIGKRK-ENEDRFDFAQ---LTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEI 82 (274)
T ss_dssp GGGCEEEEECCSSS-SCCEEEEEEE---CSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred CCeEEEEecccCCC-CccceEEEee---CCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHH
Confidence 35689999999976 9999998642 2467789999999999999999999888877654433456789999999999
Q ss_pred HHHHHHhhcc----cCCCccceEEEEEEeC-CEEEEEEeCCceEEEEeCCeeeeCCCCCCCc--hHHHHHHHcCCeEecC
Q 025288 84 DTKILEQAFV----LGKGGSTAVTAILING-QKLVVANVGDSRAVISKNGVAKQLSVDHEPS--KEKRLIESRGGFVSNI 156 (255)
Q Consensus 84 ~~~l~~~~~~----~~~~~~tt~~~~~i~~-~~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~--~e~~~~~~~~g~~~~~ 156 (255)
++.+...... ....+|||++++++.+ .+++++|+||||+|++|++++.+||+||++. .|..|+...+|.+...
T Consensus 83 ~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~Ri~~~gG~v~~~ 162 (274)
T 2iq1_A 83 DKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWN 162 (274)
T ss_dssp HHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHHHHHHHcCCEEEcC
Confidence 9999876521 2356889999988874 6999999999999999999999999999987 7888898889998842
Q ss_pred CCCCCccCCccccccccCCccCcC-CccCCCceEEEEccCC-CeEEEEEeCCCccCCCHHHHHHHHHhcCCHHHHHHHHH
Q 025288 157 PGDVPRVDGQLAVARAFGDKSLKI-HLSSEPDVKVEMITDD-TEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLI 234 (255)
Q Consensus 157 ~~~~~~~~~~~~lt~~lG~~~~~~-~~~~~p~~~~~~l~~~-~d~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~l~ 234 (255)
.....+.++++.+||+||+..+|+ ++..+|++..+++.++ +++||||||||||.++++++.+++....+|+++|+.|+
T Consensus 163 ~~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~~~~~~~~a~~L~ 242 (274)
T 2iq1_A 163 SLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVT 242 (274)
T ss_dssp TTSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHTSSSHHHHHHHHH
T ss_pred CCCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHHcCCHHHHHHHHH
Confidence 211124467899999999988776 3678999999999973 36999999999999999999999998789999999999
Q ss_pred HHHHhCCCCCCceEEEEEec
Q 025288 235 EHAVSRKSKDDISCIVVKFH 254 (255)
Q Consensus 235 ~~a~~~~~~Dn~Tvivv~i~ 254 (255)
+.|+++++.||+|+||+++.
T Consensus 243 ~~A~~~g~~DNiTvivv~~~ 262 (274)
T 2iq1_A 243 EQAIQYGTEDNSTAVVVPFG 262 (274)
T ss_dssp HHHHHTTCCSCEEEEEEECT
T ss_pred HHHHHcCCCCCeEEEEEEcc
Confidence 99999999999999999986
No 2
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=3.2e-47 Score=320.58 Aligned_cols=246 Identities=32% Similarity=0.532 Sum_probs=207.0
Q ss_pred cceeeeEEeecCCCCCCCCceeEeeecccC-CCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCCCC------------
Q 025288 3 KHITHGYHLVKGKSNHAMEDYLVSEFKQEK-DNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFW------------ 69 (255)
Q Consensus 3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~-~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~------------ 69 (255)
..|+||.++++|+|. .|||++++...... ..+..+|+|||||||+.+|+++++.+++.+.+.....
T Consensus 22 ~~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~~ 100 (307)
T 2p8e_A 22 NGLRYGLSSMQGWRV-EMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELS 100 (307)
T ss_dssp TTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------C
T ss_pred CCeeEEEEecCCCCC-cccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhccccccccccc
Confidence 478999999999987 99999987542211 2367899999999999999999999999987632111
Q ss_pred -ccHHHHHHHHHHHHHHHHHHhhcc--cCCCccceEEEEEEeCCEEEEEEeCCceEEEEeCCeeeeCCCCCCCc--hHHH
Q 025288 70 -TDTESAIRRAYHMTDTKILEQAFV--LGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPS--KEKR 144 (255)
Q Consensus 70 -~~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~tt~~~~~i~~~~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~--~e~~ 144 (255)
..+...|+++|..+++.+...... ....+|||++++++.+++++++|+||||+|++|+|++.+||+||++. .|..
T Consensus 101 ~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~E~~ 180 (307)
T 2p8e_A 101 VENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKE 180 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHHHHH
Confidence 234788999999999999875432 23568999999999999999999999999999999999999999988 6777
Q ss_pred HHHHcCCeEecCCCCCCccCCccccccccCCccCcC---------CccCCCceEEEEccCCCeEEEEEeCCCccCCCHHH
Q 025288 145 LIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKI---------HLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQE 215 (255)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~lt~~lG~~~~~~---------~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~~~ 215 (255)
|+...+|.+.. .+..+.+.+||+||+..+|. .+..+|++..+++.+++++||||||||||.+++++
T Consensus 181 rI~~~gg~v~~-----~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~e 255 (307)
T 2p8e_A 181 RIQNAGGSVMI-----QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEE 255 (307)
T ss_dssp HHHHTTCCEET-----TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHH
T ss_pred HHHHcCCEEEe-----CcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHH
Confidence 88888887762 34556789999999988764 35789999999999854589999999999999999
Q ss_pred HHHHHHh----cCCHHHHHHHHHHHHHhCCCCCCceEEEEEec
Q 025288 216 AVDCIKH----VKDAKSAAKHLIEHAVSRKSKDDISCIVVKFH 254 (255)
Q Consensus 216 i~~~~~~----~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~i~ 254 (255)
+.+++.. ..+|+++|+.|++.|+.+++.||+|+|||++.
T Consensus 256 i~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~ 298 (307)
T 2p8e_A 256 LCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFS 298 (307)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC-
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECC
Confidence 9999986 57899999999999999999999999999986
No 3
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=1.9e-47 Score=325.53 Aligned_cols=247 Identities=32% Similarity=0.437 Sum_probs=210.8
Q ss_pred eeeeEEeecCCCCCCCCceeEeeeccc------------------CCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcC-
Q 025288 5 ITHGYHLVKGKSNHAMEDYLVSEFKQE------------------KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKE- 65 (255)
Q Consensus 5 ~~~~~~s~~G~~~~~neD~~~~~~~~~------------------~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~- 65 (255)
-.||.++++|+|. .|||++++..... ...+..+|+|||||||+.++.++++.+.+.|.+.
T Consensus 14 ~~~G~~s~~G~R~-~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~ 92 (337)
T 3qn1_B 14 PLWGTVSIQGNRS-EMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEI 92 (337)
T ss_dssp CCEEEEEECTTSS-SCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeeeCCc-hhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHH
Confidence 3689999999999 9999998743211 1125789999999999999999999888777543
Q ss_pred ---CC----------CCccHHHHHHHHHHHHHHHHHHhhc-------------ccCCCccceEEEEEEeCCEEEEEEeCC
Q 025288 66 ---PD----------FWTDTESAIRRAYHMTDTKILEQAF-------------VLGKGGSTAVTAILINGQKLVVANVGD 119 (255)
Q Consensus 66 ---~~----------~~~~~~~~l~~~~~~~~~~l~~~~~-------------~~~~~~~tt~~~~~i~~~~~~~~~~GD 119 (255)
.. ....+...|+++|..++..+..... .....+|||++++++.+++++++|+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGD 172 (337)
T 3qn1_B 93 ERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGD 172 (337)
T ss_dssp HHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESS
T ss_pred HhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccC
Confidence 11 1234678899999999999986541 123578999999999999999999999
Q ss_pred ceEEEEeCCeeeeCCCCCCCc--hHHHHHHHcCCeEecCCCCCCccCCccccccccCCccCcCCccCCCceEEEEccCCC
Q 025288 120 SRAVISKNGVAKQLSVDHEPS--KEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDT 197 (255)
Q Consensus 120 sr~~~~r~~~~~~lt~dh~~~--~e~~~~~~~~g~~~~~~~~~~~~~~~~~lt~~lG~~~~~~~~~~~p~~~~~~l~~~~ 197 (255)
||+|++|++++.+||+||++. .|..++...+|.+.. .+..+.++.+.++|++|+..+++.+.++|++..+++.+++
T Consensus 173 SR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~--~~~~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~~~~ 250 (337)
T 3qn1_B 173 SRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQ--WQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSRED 250 (337)
T ss_dssp CEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEE--SSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTE
T ss_pred cEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEe--cCCceecCccccccccccccccCCCCCcceEEEEEeCCCC
Confidence 999999999999999999988 778899999998873 3345778889999999999988888899999999997768
Q ss_pred eEEEEEeCCCccCCCHHHHHHHHHh---------------------cCCHHHHHHHHHHHHHhCCCCCCceEEEEEec
Q 025288 198 EFIILASDGIWKVMTNQEAVDCIKH---------------------VKDAKSAAKHLIEHAVSRKSKDDISCIVVKFH 254 (255)
Q Consensus 198 d~lll~SDGl~d~l~~~~i~~~~~~---------------------~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~i~ 254 (255)
|+||||||||||+++++++.++++. ..+++.+|+.|++.|+.+|+.||+|||||+++
T Consensus 251 d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~l~ 328 (337)
T 3qn1_B 251 ECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLK 328 (337)
T ss_dssp EEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECC
T ss_pred CEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEEEEEEEec
Confidence 9999999999999999999999975 35688999999999999999999999999987
No 4
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=1.9e-47 Score=323.13 Aligned_cols=248 Identities=32% Similarity=0.463 Sum_probs=204.9
Q ss_pred CCcceeeeEEeecCCCCCCCCceeEeeeccc-------------CCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcC--
Q 025288 1 MSKHITHGYHLVKGKSNHAMEDYLVSEFKQE-------------KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKE-- 65 (255)
Q Consensus 1 ~~~~~~~~~~s~~G~~~~~neD~~~~~~~~~-------------~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~-- 65 (255)
|..-..||+.+++|+|+ .|||++++..... ...+..+|+|||||||+.+++++++.+.+.+.+.
T Consensus 5 ~~~~~~~g~~s~~G~R~-~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~ 83 (316)
T 3kdj_B 5 FKSVPLYGFTSICGRRP-EMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIA 83 (316)
T ss_dssp -----CEEEEEECTTSS-SCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEEEEeEeCCC-CCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 34557899999999988 9999998742211 1236789999999999999999999988877543
Q ss_pred --CCCC-------ccHHHHHHHHHHHHHHHHHHhhcccCCCccceEEEEEEeCCEEEEEEeCCceEEEEeCCeeeeCCCC
Q 025288 66 --PDFW-------TDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVD 136 (255)
Q Consensus 66 --~~~~-------~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~~~~~~~~~~GDsr~~~~r~~~~~~lt~d 136 (255)
.... ..+...++++|..+++.+.... ...+|||++++++.+++++++|+||||+|++|++++.+||+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~---~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~D 160 (316)
T 3kdj_B 84 KEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVA---PETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVD 160 (316)
T ss_dssp HHCCCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTS---CTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCC
T ss_pred hhhcccccccchHHHHHHHHHHHHHHHHHHHhccc---CCCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCC
Confidence 1111 1246677777877777774332 357999999999999999999999999999999999999999
Q ss_pred CCCc--hHHHHHHHcCCeEecCCCCCCccCCccccccccCCccCcCCccCCCceEEEEccCCCeEEEEEeCCCccCCCHH
Q 025288 137 HEPS--KEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQ 214 (255)
Q Consensus 137 h~~~--~e~~~~~~~~g~~~~~~~~~~~~~~~~~lt~~lG~~~~~~~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~~ 214 (255)
|++. .|..++...+|.+.+ ....+..+...+||++|+..+++.+.++|++..+++..++|+||||||||||+++++
T Consensus 161 H~~~~~~e~~ri~~~~g~v~~--~~~~r~~g~l~~sRalGd~~~~~~~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ 238 (316)
T 3kdj_B 161 HKPDREDEAARIEAAGGKVIQ--WNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDE 238 (316)
T ss_dssp CCTTSHHHHHHHHHTTCCEEE--SSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHTSSCHH
T ss_pred CCCCCHHHHHHHHHcCCeEEe--cCCceEcceeccccccCccccCCCcCCCCceEEEEecCCCCEEEEEccCcccCCCHH
Confidence 9988 778899999998873 223567788899999999999998899999999996665899999999999999999
Q ss_pred HHHHHHHh---------------------------cCCHHHHHHHHHHHHHhCCCCCCceEEEEEec
Q 025288 215 EAVDCIKH---------------------------VKDAKSAAKHLIEHAVSRKSKDDISCIVVKFH 254 (255)
Q Consensus 215 ~i~~~~~~---------------------------~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~i~ 254 (255)
++.++++. ..+|+.+|+.|++.|+.+|+.||+|+|||+++
T Consensus 239 ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~~g~~DNiTvivv~l~ 305 (316)
T 3kdj_B 239 EACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLK 305 (316)
T ss_dssp HHHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECS
T ss_pred HHHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHHHHcCCCCCeEEEEEEcc
Confidence 99999875 24688999999999999999999999999986
No 5
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=2.6e-46 Score=324.11 Aligned_cols=247 Identities=30% Similarity=0.443 Sum_probs=212.9
Q ss_pred ceeeeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHH
Q 025288 4 HITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMT 83 (255)
Q Consensus 4 ~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 83 (255)
.+.+|+.+++|+|+ .|||++++.. ...+..+|+|||||||+.+++++++.+.+.+.+......++...|+++|..+
T Consensus 121 ~~~~g~~s~~G~R~-~NED~~~~~~---~~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~~ 196 (389)
T 4da1_A 121 LENVGCASQIGKRK-ENEDRFDFAQ---LTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEI 196 (389)
T ss_dssp GGGCEEEEECTTSS-SCCEEEEEEE---CSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred ceeEEEecCCCCCC-CCcceeeeee---cCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHH
Confidence 35688999999977 9999998632 2467889999999999999999999998888765545567889999999999
Q ss_pred HHHHHHhhcc----cCCCccceEEEEEEeCC-EEEEEEeCCceEEEEeCCeeeeCCCCCCCc--hHHHHHHHcCCeEecC
Q 025288 84 DTKILEQAFV----LGKGGSTAVTAILINGQ-KLVVANVGDSRAVISKNGVAKQLSVDHEPS--KEKRLIESRGGFVSNI 156 (255)
Q Consensus 84 ~~~l~~~~~~----~~~~~~tt~~~~~i~~~-~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~--~e~~~~~~~~g~~~~~ 156 (255)
+..+...... ....+|||++++++.++ +++++|+||||+|++|++++.+||+||++. .|.+|+...+|.+...
T Consensus 197 n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~ 276 (389)
T 4da1_A 197 DKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWN 276 (389)
T ss_dssp HHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHTCCEECC
T ss_pred HHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcCCeEecc
Confidence 9999876532 12468899888888765 999999999999999999999999999987 5788899999998754
Q ss_pred CCCCCccCCccccccccCCccCcCC-ccCCCceEEEEccCC-CeEEEEEeCCCccCCCHHHHHHHHHhcCCHHHHHHHHH
Q 025288 157 PGDVPRVDGQLAVARAFGDKSLKIH-LSSEPDVKVEMITDD-TEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLI 234 (255)
Q Consensus 157 ~~~~~~~~~~~~lt~~lG~~~~~~~-~~~~p~~~~~~l~~~-~d~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~l~ 234 (255)
....++.++++.+||++|+..+++. +..+|++..+++..+ +++||||||||||+++++++.+++....+|+++|+.|+
T Consensus 277 ~~~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~~~~~~~~a~~Lv 356 (389)
T 4da1_A 277 SLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVT 356 (389)
T ss_dssp ---CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHHHHSSSHHHHHHHHH
T ss_pred cCCCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHhcCCHHHHHHHHH
Confidence 3344577889999999999887763 678999999999864 67999999999999999999999988889999999999
Q ss_pred HHHHhCCCCCCceEEEEEec
Q 025288 235 EHAVSRKSKDDISCIVVKFH 254 (255)
Q Consensus 235 ~~a~~~~~~Dn~Tvivv~i~ 254 (255)
+.|+.+|+.||+|||||++.
T Consensus 357 ~~A~~~g~~DNiTvivv~~~ 376 (389)
T 4da1_A 357 EQAIQYGTEDNSTAVVVPFG 376 (389)
T ss_dssp HHHHHHTCCSCEEEEEEEEC
T ss_pred HHHHHcCCCCCeEEEEEEec
Confidence 99999999999999999986
No 6
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=3e-46 Score=314.27 Aligned_cols=245 Identities=31% Similarity=0.533 Sum_probs=202.0
Q ss_pred cceeeeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCCC-CccHHHHHHHHHH
Q 025288 3 KHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDF-WTDTESAIRRAYH 81 (255)
Q Consensus 3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 81 (255)
.+|+||..+++|.|. .|||++++.... +.+..+|+|||||||+.+++++++.+.+.+.+.... ..++...|+++|.
T Consensus 21 ~~~~~~~~s~~G~R~-~nED~~~~~~~~--~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~l~~a~~ 97 (304)
T 2i0o_A 21 EFLASGSSSMQGWRI-SQEDAHNCILNF--DDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFL 97 (304)
T ss_dssp SSEEEEEEEEEESSS-CCCEEEEEEEEE--ETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHHHTTCHHHHHHHHHH
T ss_pred CceEEEEeecCCCCC-CccCEEEEEecc--CCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhcccccHHHHHHHHHH
Confidence 478999999999987 999999864321 356789999999999999999999999888764211 2356888999999
Q ss_pred HHHHHHHHhh----------------cccCCCccceEEEEEEeCCEEEEEEeCCceEEEEeCCeeeeCCCCCCCc--hHH
Q 025288 82 MTDTKILEQA----------------FVLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPS--KEK 143 (255)
Q Consensus 82 ~~~~~l~~~~----------------~~~~~~~~tt~~~~~i~~~~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~--~e~ 143 (255)
.+++.+.... ......+|||++++++.+++++++|+||||+|++|+|++.+||+||++. .|.
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~e~ 177 (304)
T 2i0o_A 98 GFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEY 177 (304)
T ss_dssp HHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHH
T ss_pred HHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEcCCCcCCcCHHHH
Confidence 9999876432 1124679999999999999999999999999999999999999999988 677
Q ss_pred HHHHHcCCeEecCCCCCCccCCccccccccCCccCcC---------CccCCCceEEEEccCCCeEEEEEeCCCccCCCHH
Q 025288 144 RLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKI---------HLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQ 214 (255)
Q Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~lt~~lG~~~~~~---------~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~~ 214 (255)
.|+...+|.+... .+.++.+.+||+||+..+|. .+..+|++..+++.+++.|||||||||||.++++
T Consensus 178 ~rI~~~gg~v~~~----~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ 253 (304)
T 2i0o_A 178 QRIEKAGGRVTLD----GRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSE 253 (304)
T ss_dssp HHHHHTTCCBCTT----SCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHH
T ss_pred HHHHhCCCEEEeC----CeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCCHH
Confidence 8899988887632 35567889999999988764 3567999999999984346899999999999999
Q ss_pred HHHHHHHh-----cCCHHHHHHHHHHHHHh------CCCCCCceEEEEEec
Q 025288 215 EAVDCIKH-----VKDAKSAAKHLIEHAVS------RKSKDDISCIVVKFH 254 (255)
Q Consensus 215 ~i~~~~~~-----~~~~~~~a~~l~~~a~~------~~~~Dn~Tvivv~i~ 254 (255)
++.+++.. ..+|+++|+.|++.|+. +++.||+|+|||+++
T Consensus 254 ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 254 QVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304 (304)
T ss_dssp HHHHHHHHHHTSTTCCHHHHHHHHHHHHC------------CEEEEEEEEC
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEEeC
Confidence 99999986 47899999999999997 357899999999985
No 7
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=1.1e-45 Score=318.82 Aligned_cols=246 Identities=31% Similarity=0.491 Sum_probs=208.6
Q ss_pred cceeeeEEeecCCCCCCCCceeEeeecccC-CCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCC--------CCCccHH
Q 025288 3 KHITHGYHLVKGKSNHAMEDYLVSEFKQEK-DNELGLFAIFDGHLGHDVANYLQTHLFDNILKEP--------DFWTDTE 73 (255)
Q Consensus 3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~-~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~--------~~~~~~~ 73 (255)
..|.||.++++|+|. .|||++++...... ..+..+|+|||||||+.+|.++++.+++.+.... .....+.
T Consensus 20 ~~l~~g~~s~~G~R~-~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~~~ 98 (382)
T 1a6q_A 20 NGLRYGLSSMQGWRV-EMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVK 98 (382)
T ss_dssp TTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHH
T ss_pred CceEEEEEecCCCCC-CCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCCHHHHH
Confidence 468999999999987 99999987543211 2357899999999999999999999998886421 1123457
Q ss_pred HHHHHHHHHHHHHHHHhhc--ccCCCccceEEEEEEeCCEEEEEEeCCceEEEEeCCeeeeCCCCCCCc--hHHHHHHHc
Q 025288 74 SAIRRAYHMTDTKILEQAF--VLGKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPS--KEKRLIESR 149 (255)
Q Consensus 74 ~~l~~~~~~~~~~l~~~~~--~~~~~~~tt~~~~~i~~~~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~--~e~~~~~~~ 149 (255)
..|+++|..+++.+..... .....+|||++++++.+++++++|+||||+|++|+|++.++|+||++. .|..|+...
T Consensus 99 ~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~RI~~~ 178 (382)
T 1a6q_A 99 NGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNA 178 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHHHHHHhc
Confidence 8899999999999987642 223578999999999999999999999999999999999999999988 677888888
Q ss_pred CCeEecCCCCCCccCCccccccccCCccCcC---------CccCCCceEEEEcc-CCCeEEEEEeCCCccCCCHHHHHHH
Q 025288 150 GGFVSNIPGDVPRVDGQLAVARAFGDKSLKI---------HLSSEPDVKVEMIT-DDTEFIILASDGIWKVMTNQEAVDC 219 (255)
Q Consensus 150 ~g~~~~~~~~~~~~~~~~~lt~~lG~~~~~~---------~~~~~p~~~~~~l~-~~~d~lll~SDGl~d~l~~~~i~~~ 219 (255)
+|.+.+ .+..+.+.+||+||+..+|. .+..+|++..+++. +++++||||||||||.++++++.++
T Consensus 179 gg~v~~-----~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~ 253 (382)
T 1a6q_A 179 GGSVMI-----QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDF 253 (382)
T ss_dssp TCCEET-----TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHH
T ss_pred CcEEec-----ccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHHH
Confidence 888772 35556789999999987763 35689999999999 6567999999999999999999999
Q ss_pred HHh----cCCHHHHHHHHHHHHHhCCCCCCceEEEEEec
Q 025288 220 IKH----VKDAKSAAKHLIEHAVSRKSKDDISCIVVKFH 254 (255)
Q Consensus 220 ~~~----~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~i~ 254 (255)
+.. ..+|+.+|+.|++.|+.+++.||+|+|||++.
T Consensus 254 v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~ 292 (382)
T 1a6q_A 254 VRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFP 292 (382)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECT
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHhcCCcCCEEEEEEEec
Confidence 986 47899999999999999999999999999986
No 8
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-44 Score=309.52 Aligned_cols=244 Identities=28% Similarity=0.405 Sum_probs=199.4
Q ss_pred cceeeeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHH
Q 025288 3 KHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHM 82 (255)
Q Consensus 3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 82 (255)
..+.++..+++|+|. .|||++++........+..+|+|||||||..+|+++++.+.+.+.+... .....|+++|..
T Consensus 11 ~~~~~~~~s~~G~R~-~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~~---~~~~~l~~a~~~ 86 (364)
T 2isn_A 11 WYTTTVAATMLGRRP-TDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSE---FTFAEVKKACLS 86 (364)
T ss_dssp TTEEEEEEEECTTSS-SCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCSS---CCHHHHHHHHHH
T ss_pred CceEEEEEEcCCCCC-cCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhhc---ccHHHHHHHHHH
Confidence 347899999999977 9999998754333356788999999999999999999999998865322 236789999999
Q ss_pred HHHHHHHhhcccCCCccceEEEEEEeC-----------------------------------------------------
Q 025288 83 TDTKILEQAFVLGKGGSTAVTAILING----------------------------------------------------- 109 (255)
Q Consensus 83 ~~~~l~~~~~~~~~~~~tt~~~~~i~~----------------------------------------------------- 109 (255)
+++.+....... ..+|||++++++..
T Consensus 87 ~d~~i~~~~~~~-~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (364)
T 2isn_A 87 LDAEIIRKLGPK-HVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPDVQQ 165 (364)
T ss_dssp HHHHHHHHHCSS-SCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCCCCCEE
T ss_pred HHHHHHHhcccC-CCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhcccccccccccccccccc
Confidence 999997765433 56888888877742
Q ss_pred -------CEEEEEEeCCceEEEE-eCCeeeeCCCCCCCc--hHHHHHHHcCCeEecCCCCCCccCCccccccccCCccCc
Q 025288 110 -------QKLVVANVGDSRAVIS-KNGVAKQLSVDHEPS--KEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLK 179 (255)
Q Consensus 110 -------~~~~~~~~GDsr~~~~-r~~~~~~lt~dh~~~--~e~~~~~~~~g~~~~~~~~~~~~~~~~~lt~~lG~~~~~ 179 (255)
.+++++|+||||+|++ |+|++.+||+||++. .|..|+...+|.+.. ...++..+.+.+||+||+..+|
T Consensus 166 ~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~--~~~~rv~g~l~ltRalGd~~~k 243 (364)
T 2isn_A 166 KTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVET--FDVPRVDGVLALSRAFGDSDFK 243 (364)
T ss_dssp EEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEE--SSSEEETTTBSCSBCEECGGGS
T ss_pred cccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEec--CCCcccCCceeeEEEecchhhc
Confidence 3899999999999999 689999999999988 567788888898873 2233445666899999998876
Q ss_pred C---------CccCCCceEEEEccCCCeEEEEEeCCCccCCC--HHHHHHHH-----HhcCCHHHHHHHHHHHHHhCCCC
Q 025288 180 I---------HLSSEPDVKVEMITDDTEFIILASDGIWKVMT--NQEAVDCI-----KHVKDAKSAAKHLIEHAVSRKSK 243 (255)
Q Consensus 180 ~---------~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~--~~~i~~~~-----~~~~~~~~~a~~l~~~a~~~~~~ 243 (255)
. ++..+|++..+++.+ +|+||||||||||.++ ++++.+++ ....+|+++|+.|++.|+.+++.
T Consensus 244 ~~~~l~~~~~~v~~~Pdv~~~~l~~-~D~llL~SDGl~d~l~~~~~~v~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~ 322 (364)
T 2isn_A 244 MNPNLPPEEQKVIAVPDVRQFYALS-SDLLLLACDGVYEPSGMDWAYVRDLTVAEMQRSKGDLEEVAARVMDYAYDMNSQ 322 (364)
T ss_dssp CCCSSCGGGSSSBCCCEEEEEEECT-TCEEEEECHHHHCSSSCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCC
T ss_pred cccccCcccCceEEEeEEEEEECCC-CCEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCCC
Confidence 2 456899999999998 6899999999999986 66766554 33468999999999999999999
Q ss_pred CCceEEEEEec
Q 025288 244 DDISCIVVKFH 254 (255)
Q Consensus 244 Dn~Tvivv~i~ 254 (255)
||+|+|||++.
T Consensus 323 DNiTvivv~~~ 333 (364)
T 2isn_A 323 DNISVMLVAFH 333 (364)
T ss_dssp SCEEEEEEEEC
T ss_pred CCEEEEEEEcC
Confidence 99999999985
No 9
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=2.5e-44 Score=305.34 Aligned_cols=249 Identities=22% Similarity=0.382 Sum_probs=198.0
Q ss_pred cceeeeEEeecCCCCCCCCceeEeeeccc-CCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCCC-------------
Q 025288 3 KHITHGYHLVKGKSNHAMEDYLVSEFKQE-KDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDF------------- 68 (255)
Q Consensus 3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~-~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~------------- 68 (255)
..|.+++.+++|.|+ .|||++++..... ...+..+|+|||||||+.+++++++.+++.+.+....
T Consensus 20 ~~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~ 98 (324)
T 2i44_A 20 PAFDAAIFTDIGGRK-HQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPA 98 (324)
T ss_dssp TTEEEEEEEECTTSS-SCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCH
T ss_pred cceEEEEEECCCCCC-ccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCc
Confidence 358899999999976 9999998742211 2457789999999999999999999999888653100
Q ss_pred -------CccHHHHHHHHHHHHHHHHHHhhccc---CCCccceEEEEEEeCCEEEEEEeCCceEEEEeC---C-eeeeCC
Q 025288 69 -------WTDTESAIRRAYHMTDTKILEQAFVL---GKGGSTAVTAILINGQKLVVANVGDSRAVISKN---G-VAKQLS 134 (255)
Q Consensus 69 -------~~~~~~~l~~~~~~~~~~l~~~~~~~---~~~~~tt~~~~~i~~~~~~~~~~GDsr~~~~r~---~-~~~~lt 134 (255)
..++...|+++|..+++.+....... ..+++||++ ++.+++++++|+||||+|++|+ | ++.+||
T Consensus 99 ~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~--~i~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT 176 (324)
T 2i44_A 99 TEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTA--VLAKGFVAVGHLGDSRIAMGVETPNGLNCEFLT 176 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEE--EEETTEEEEEEESSCEEEEEEEETTEEEEEESC
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEE--EEECCeEEEEEccCceEEEEeccCCCceEEECC
Confidence 12346789999999999998765322 123444444 3789999999999999999996 7 899999
Q ss_pred CCCCCc--hHHHHHHHcCCeEecCCC---CCCccCCccccccccCC----ccCc----------CCccCCCceEEEEccC
Q 025288 135 VDHEPS--KEKRLIESRGGFVSNIPG---DVPRVDGQLAVARAFGD----KSLK----------IHLSSEPDVKVEMITD 195 (255)
Q Consensus 135 ~dh~~~--~e~~~~~~~~g~~~~~~~---~~~~~~~~~~lt~~lG~----~~~~----------~~~~~~p~~~~~~l~~ 195 (255)
+||++. .|++|+...+|.+..... ......+...++|++|+ ..++ +++..+|++..+++.+
T Consensus 177 ~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l~~ 256 (324)
T 2i44_A 177 VDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTP 256 (324)
T ss_dssp CCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEEECCT
T ss_pred CCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEEEEEEcCC
Confidence 999988 788899999998853211 11123456778888888 3322 2456899999999999
Q ss_pred CCe-EEEEEeCCCccCCCHHHHHHHHHhc----CCHHH--HHHHHHHHHHhCCCCCCceEEEEEecC
Q 025288 196 DTE-FIILASDGIWKVMTNQEAVDCIKHV----KDAKS--AAKHLIEHAVSRKSKDDISCIVVKFHR 255 (255)
Q Consensus 196 ~~d-~lll~SDGl~d~l~~~~i~~~~~~~----~~~~~--~a~~l~~~a~~~~~~Dn~Tvivv~i~~ 255 (255)
+| +||||||||||.++++++.+++... .+|++ +|+.|++.|+.+++.||+|+|||++++
T Consensus 257 -~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~ 322 (324)
T 2i44_A 257 -QHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQSADNITAMTVFFKK 322 (324)
T ss_dssp -TEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEC-
T ss_pred -CCeEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeeC
Confidence 56 9999999999999999999999764 68999 999999999999999999999999863
No 10
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=4.8e-44 Score=290.75 Aligned_cols=233 Identities=20% Similarity=0.304 Sum_probs=196.3
Q ss_pred CCcceeeeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCC--CCCccHHHHHHH
Q 025288 1 MSKHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEP--DFWTDTESAIRR 78 (255)
Q Consensus 1 ~~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 78 (255)
|+++|+++..|++|+.+..|||++++ +..+|+|||||||+.++.++++.+.+.+.+.. ....++...|++
T Consensus 1 ~~~~~~~~~~s~~G~~r~~nED~~~~--------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~l~~ 72 (237)
T 1txo_A 1 MTLVLRYAARSDRGLVRANNEDSVYA--------GARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAKLDA 72 (237)
T ss_dssp --CEEEEEEEEECCSSCSSCCEEEEE--------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHHHHHHH
T ss_pred CceEEEEEEecCCCCCCCcCCCcccc--------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHH
Confidence 78899999999999844499999974 23599999999999999999999998886642 223467889999
Q ss_pred HHHHHHHHHHHhhccc--CCCccceEEEEEEeCCEEEEEEeCCceEEEEeCCeeeeCCCCCCCchHHHHHHHcCCeEecC
Q 025288 79 AYHMTDTKILEQAFVL--GKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNI 156 (255)
Q Consensus 79 ~~~~~~~~l~~~~~~~--~~~~~tt~~~~~i~~~~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~~e~~~~~~~~g~~~~~ 156 (255)
+|..++..+....... ...+|||++++++.+++++++|+||||+|++|++++.++|+||++.++ .+. .|.+.
T Consensus 73 a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~~~~--~~~--~G~i~-- 146 (237)
T 1txo_A 73 AVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQT--LVD--EGRIT-- 146 (237)
T ss_dssp HHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHHHH--HHH--TTSSC--
T ss_pred HHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCHHHH--HHH--cCCCC--
Confidence 9999999998765322 246899999999999999999999999999999999999999976433 232 45555
Q ss_pred CCCCCccCCccccccccCCccCcCCccCCCceEEEEccCCCeEEEEEeCCCccCCCHHHHHHHHHhcCCHHHHHHHHHHH
Q 025288 157 PGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEH 236 (255)
Q Consensus 157 ~~~~~~~~~~~~lt~~lG~~~~~~~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~l~~~ 236 (255)
+.+...++.++.+++++|... .+|++..+++.+ +|+||||||||||.++++++.+++.. .+|+++|+.|++.
T Consensus 147 ~~~~~~~~~~~~~tr~lg~~~------~~p~~~~~~l~~-~d~lvl~SDGl~d~l~~~~i~~~~~~-~~~~~~a~~L~~~ 218 (237)
T 1txo_A 147 PEEAHSHPQRSLIMRALTGHE------VEPTLTMREARA-GDRYLLCSDGLSDPVSDETILEALQI-PEVAESAHRLIEL 218 (237)
T ss_dssp TTGGGGCTTTTCBCCCBSSSC------CCCEEEEEECCT-TCEEEEECHHHHTTSCHHHHHHHHTS-SSHHHHHHHHHHH
T ss_pred HHHHhhCccccceeeccCCCC------ccceEEEEecCC-CCEEEEECCCCCCCCCHHHHHHHHhc-CCHHHHHHHHHHH
Confidence 455556677889999999643 789999999998 69999999999999999999999975 6999999999999
Q ss_pred HHhCCCCCCceEEEEEecC
Q 025288 237 AVSRKSKDDISCIVVKFHR 255 (255)
Q Consensus 237 a~~~~~~Dn~Tvivv~i~~ 255 (255)
|+.+++.||+|+||+++++
T Consensus 219 a~~~g~~DniTvivv~~~~ 237 (237)
T 1txo_A 219 ALRGGGPDNVTVVVADLEH 237 (237)
T ss_dssp HHHTTCCSCEEEEEEEEEC
T ss_pred HHHcCCCCCeEEEEEEeeC
Confidence 9999999999999999874
No 11
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=7.8e-44 Score=291.77 Aligned_cols=237 Identities=22% Similarity=0.332 Sum_probs=197.5
Q ss_pred cceeeeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHH-cCC--CC--CccHHHHHH
Q 025288 3 KHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNIL-KEP--DF--WTDTESAIR 77 (255)
Q Consensus 3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~-~~~--~~--~~~~~~~l~ 77 (255)
..|++++.|++|..+..|||++++... ..+..+|+|||||||+..+.++++.+.+.+. +.. .. ...+...|+
T Consensus 4 ~~~~~~~~s~~G~~r~~neD~~~~~~~---~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~ 80 (250)
T 2pk0_A 4 KYMEISLLTDIGQRRSNNQDFINQFEN---KAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWML 80 (250)
T ss_dssp CCEEEEEEEECCTTCSCCCEEEEEEEC---TTCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHH
T ss_pred ceEEEEEecCCCCCCCcCCCceEeccC---CCCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHH
Confidence 468999999999944499999986432 2467899999999999988888888877775 321 11 234577899
Q ss_pred HHHHHHHHHHHHhhccc-CCCccceEEEEEEeCCEEEEEEeCCceEEEEeCCeeeeCCCCCCCchHHHHHHHcCCeEecC
Q 025288 78 RAYHMTDTKILEQAFVL-GKGGSTAVTAILINGQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNI 156 (255)
Q Consensus 78 ~~~~~~~~~l~~~~~~~-~~~~~tt~~~~~i~~~~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~~e~~~~~~~~g~~~~~ 156 (255)
++|..+++.+....... ...+|||++++++.+++++++|+||||+|++|++++.++|.||++.++ .+ . .|.+.
T Consensus 81 ~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~--~~-~-~g~i~-- 154 (250)
T 2pk0_A 81 VSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNE--LV-K-AGQLT-- 154 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBHHHH--HH-H-TTSSC--
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCHHHH--HH-H-cCCCC--
Confidence 99999999998776432 356899999999999999999999999999999999999999987544 22 2 34444
Q ss_pred CCCCCccCCccccccccCCccCcCCccCCCceEEEEccCCCeEEEEEeCCCccCCCHHHHHHHHHhcCCHHHHHHHHHHH
Q 025288 157 PGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEH 236 (255)
Q Consensus 157 ~~~~~~~~~~~~lt~~lG~~~~~~~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~l~~~ 236 (255)
+.+...+++++.+||++|+.. ..+|++..+++.+ +|+||||||||||.++++++.+++....+|+++++.|++.
T Consensus 155 ~~~~~~~~~~~~ltralG~~~-----~~~p~~~~~~l~~-gd~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~L~~~ 228 (250)
T 2pk0_A 155 EEEAASHPQKNIITQSIGQAN-----PVEPDLGVHLLEE-GDYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITL 228 (250)
T ss_dssp HHHHHTCCSCCCBSCCBSCSS-----CCCCEEEEEECCT-TCEEEEECHHHHTTSCHHHHHHHHTSSSCHHHHHHHHHHH
T ss_pred HHHHHhCCCcceEEeecCCCC-----CccceEEEEEcCC-CCEEEEECCCCCCCcCHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 222335667899999999987 6899999999999 6999999999999999999999998877999999999999
Q ss_pred HHhCCCCCCceEEEEEec
Q 025288 237 AVSRKSKDDISCIVVKFH 254 (255)
Q Consensus 237 a~~~~~~Dn~Tvivv~i~ 254 (255)
|+.+++.||+|+||++++
T Consensus 229 a~~~g~~DniTvivv~~~ 246 (250)
T 2pk0_A 229 ANHRGGLDNITVALVYVE 246 (250)
T ss_dssp HHHTTCCSCEEEEEEEEC
T ss_pred HHHcCCCCCeEEEEEEee
Confidence 999999999999999986
No 12
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-43 Score=305.11 Aligned_cols=241 Identities=23% Similarity=0.335 Sum_probs=198.6
Q ss_pred ceeeeEEeecCCCCCCC-----CceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCCCCccHHHHHHH
Q 025288 4 HITHGYHLVKGKSNHAM-----EDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRR 78 (255)
Q Consensus 4 ~~~~~~~s~~G~~~~~n-----eD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~ 78 (255)
++.++.++++|+|+ .| ||++++........+..+|+|||||||..+|+++++.+.+.+.+.. ..+...|++
T Consensus 12 ~~~~~~~s~~G~R~-~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~---~~~~~al~~ 87 (377)
T 3d8k_A 12 RTVCASATSRNRRP-TSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR---DVNEEEITR 87 (377)
T ss_dssp HHHHHHTTTCEEEE-EECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS---SSSHHHHHH
T ss_pred cEEEEEEEccCCCC-ccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc---ccHHHHHHH
Confidence 46788899999987 65 5555543222235678899999999999999999999999986543 235789999
Q ss_pred HHHHHHHHHHHhhcccCCCccceEEEEEEe--------------------------------------------------
Q 025288 79 AYHMTDTKILEQAFVLGKGGSTAVTAILIN-------------------------------------------------- 108 (255)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~-------------------------------------------------- 108 (255)
+|..+++.+..... .+|||++++++.
T Consensus 88 af~~~d~~l~~~~~----~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~~~ 163 (377)
T 3d8k_A 88 QFERMDGDLRAANL----PGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRAAK 163 (377)
T ss_dssp HHHHHHHHHHHHTC----CCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGGTT
T ss_pred HHHHHHHHHHhccc----CCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeeccccccccc
Confidence 99999999987643 477888777764
Q ss_pred -CCEEEEEEeCCceEEEEeCCeeeeCCCCCCCc--hHHHHHHHcCCeEecCCCCCCccCCccccccccCCccCcC-----
Q 025288 109 -GQKLVVANVGDSRAVISKNGVAKQLSVDHEPS--KEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKI----- 180 (255)
Q Consensus 109 -~~~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~--~e~~~~~~~~g~~~~~~~~~~~~~~~~~lt~~lG~~~~~~----- 180 (255)
+++++++|+||||+|++|+|++.+||+||++. .|+.|+...+|.+....+ ..+..+...+||+||+..+|.
T Consensus 164 ~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g-~~rv~G~l~vtRalGd~~~k~~~~~~ 242 (377)
T 3d8k_A 164 GIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNG-ELLLGGVVPMTRAFGSFDFKKGGQGK 242 (377)
T ss_dssp CEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSS-SEEETTTBSCSBCSSCGGGSCC---C
T ss_pred CCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCC-cEEEcCceecceeecChhhhcccccc
Confidence 14899999999999999999999999999998 588899998888763221 114456678999999988773
Q ss_pred ----CccCCCceEEEEccCCCeEEEEEeCCCccCCCHHHHHHHHHh-----cCCHHHHHHHHHHHHHhCCCCCCceEEEE
Q 025288 181 ----HLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKH-----VKDAKSAAKHLIEHAVSRKSKDDISCIVV 251 (255)
Q Consensus 181 ----~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~~~i~~~~~~-----~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv 251 (255)
.+..+|++..+++.+ +|+||||||||||.++++++...+.. ..+|+.+|+.|++.|+.+++.||+|+|||
T Consensus 243 ~~~~~v~~~Pdv~~~~l~~-~D~llL~SDGl~d~ls~~e~v~~v~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv 321 (377)
T 3d8k_A 243 LQQDLVSAVPDVTTFFAYP-GDDIVAGTAGAFAHFRSHAAIAAAIALYPVSPETVLDAAKAMVVNAKRRKVTKNISTFVR 321 (377)
T ss_dssp CSSCSSBCCCEEEEEEECT-TCEEEEECGGGGCSCSSHHHHHHHHTTSCCCGGGHHHHHHHHHHTTTTSSCCSCCCEEEE
T ss_pred cccCccccCCcEEEEEcCC-CCEEEEEECCcccCCCcHHHHHHHHHHhhccCCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 567899999999999 69999999999999999998765543 46899999999999999999999999999
Q ss_pred Eec
Q 025288 252 KFH 254 (255)
Q Consensus 252 ~i~ 254 (255)
+++
T Consensus 322 ~~~ 324 (377)
T 3d8k_A 322 HLP 324 (377)
T ss_dssp ECC
T ss_pred Eec
Confidence 986
No 13
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=6.7e-43 Score=284.49 Aligned_cols=231 Identities=19% Similarity=0.230 Sum_probs=180.1
Q ss_pred eeeeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCC----C-CccHHHHHHHH
Q 025288 5 ITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPD----F-WTDTESAIRRA 79 (255)
Q Consensus 5 ~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~----~-~~~~~~~l~~~ 79 (255)
|+|+..|++|..+..|||++ +... ..+. +|+|||||||+..+..+++.+.+.+.+... . ...+...|+++
T Consensus 1 ~~~~~~s~~G~~r~~neD~~-~~~~---~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 75 (240)
T 2j82_A 1 MDVAGLTDCGLIRKSNQDAF-YIDE---KHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQA 75 (240)
T ss_dssp CEEEEEEECCSSCSSCCEEE-EECT---TTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred CeEEEeCCCCCCCCcCCCcc-EecC---CCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHH
Confidence 57999999999444999999 5321 2345 999999999998888777777666643210 0 33567889999
Q ss_pred HHHHHHHHHHhhccc--CCCccceEEEEEEe--CCEEEEEEeCCceEEEEeCCeeeeCCCCCCCchHHHHHHHcCCeEec
Q 025288 80 YHMTDTKILEQAFVL--GKGGSTAVTAILIN--GQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSN 155 (255)
Q Consensus 80 ~~~~~~~l~~~~~~~--~~~~~tt~~~~~i~--~~~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~~e~~~~~~~~g~~~~ 155 (255)
|..+++.+....... ..+++||++++++. +++++++|+||||+|++|++++.++|.||++.++ .+ . .|.+.
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~--~~-~-~g~i~- 150 (240)
T 2j82_A 76 FLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQ--AV-Q-LGSLT- 150 (240)
T ss_dssp HHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBHHHH--C----------
T ss_pred HHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcHHHH--HH-H-cCCCC-
Confidence 999999998876432 34579999999999 9999999999999999999999999999987543 22 2 34444
Q ss_pred CCCCCCccCCccccccccCCccCcCCccCCCceEEEEccCCCeEEEEEeCCCccCCCHHHHHHHHHhcCCHHHHHHHHHH
Q 025288 156 IPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIE 235 (255)
Q Consensus 156 ~~~~~~~~~~~~~lt~~lG~~~~~~~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~l~~ 235 (255)
+.+...+++++.+||++|+.. ..+|++..+++.+ +|+||||||||||.++++++.+++. ..+|+++++.|++
T Consensus 151 -~~~~~~~~~~~~ltralG~~~-----~~~p~~~~~~l~~-gd~lll~SDGl~d~l~~~~i~~~l~-~~~~~~~a~~l~~ 222 (240)
T 2j82_A 151 -IEQARQHPWRHVLSQCLGRED-----LSQIDIQPIDLEP-GDRLLLCSDGLTEELTDDVISIYLS-EPNVQKAAAALVD 222 (240)
T ss_dssp ----------CCCBSCCBSCTT-----CCCCEEEEEECCT-TCEEEEECHHHHTTSCHHHHHHHHT-CSSHHHHHHHHHH
T ss_pred -HHHHhcCCCcCeEeecCCCCC-----ceeEEEEEEeeCC-CCEEEEECCCCCCCCCHHHHHHHHc-cCCHHHHHHHHHH
Confidence 344456778899999999987 6899999999999 6999999999999999999999998 6899999999999
Q ss_pred HHHhCCCCCCceEEEEEe
Q 025288 236 HAVSRKSKDDISCIVVKF 253 (255)
Q Consensus 236 ~a~~~~~~Dn~Tvivv~i 253 (255)
.|+.+++.||+|+||+++
T Consensus 223 ~a~~~g~~DniTvivv~~ 240 (240)
T 2j82_A 223 AAKTHGGRDNVTVVVISV 240 (240)
T ss_dssp HHHHTTCCSCEEEEEEEC
T ss_pred HHHHcCCCCCeEEEEEeC
Confidence 999999999999999975
No 14
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=3.3e-43 Score=301.75 Aligned_cols=236 Identities=23% Similarity=0.306 Sum_probs=195.6
Q ss_pred EeecCCCCC--CCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCC----CCCccHHHHHHHHHHHH
Q 025288 10 HLVKGKSNH--AMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEP----DFWTDTESAIRRAYHMT 83 (255)
Q Consensus 10 ~s~~G~~~~--~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~ 83 (255)
++.+|+|+. .|||++++.. .+.+..+|+|||||||+.+|+++++.+.+.+.+.. ....++...|+++|..+
T Consensus 25 ~~~~G~r~~~~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~~~~~~~~~~~l~~a~~~~ 101 (358)
T 2irm_A 25 YKDDGRRCEGYESRDKKCLCI---SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVCNTDEAVKELIRQSFMSV 101 (358)
T ss_dssp ECSSSCEEECSSCCEEEEEEE---CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTTCCSHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCCCCceEEEEE---CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 667999873 5999998642 34678899999999999999999999999987521 12235678899999999
Q ss_pred HHHHHHhhc-------------------------------------ccCCCccceEEEEEEeCCEEEEEEeCCceEEEEe
Q 025288 84 DTKILEQAF-------------------------------------VLGKGGSTAVTAILINGQKLVVANVGDSRAVISK 126 (255)
Q Consensus 84 ~~~l~~~~~-------------------------------------~~~~~~~tt~~~~~i~~~~~~~~~~GDsr~~~~r 126 (255)
++.+..... .....+|||++++++.+++++++|+||||+|++|
T Consensus 102 d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~l~r 181 (358)
T 2irm_A 102 EKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCK 181 (358)
T ss_dssp HHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEE
T ss_pred HHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCeEEEEE
Confidence 998876321 1224699999999999999999999999999999
Q ss_pred C---C--eeeeCCCCCCCc--hHHHHHHHcCCeEecCCCCCCccCCccccccccCCccCcC--------------CccCC
Q 025288 127 N---G--VAKQLSVDHEPS--KEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKI--------------HLSSE 185 (255)
Q Consensus 127 ~---~--~~~~lt~dh~~~--~e~~~~~~~~g~~~~~~~~~~~~~~~~~lt~~lG~~~~~~--------------~~~~~ 185 (255)
+ | ++.+||+||++. .|++|+...+|.+... +..+ ..+||+||+..+|. ++..+
T Consensus 182 ~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~-----r~~g-~llTRalGd~~~K~~~~~~~~~~~~~~~~v~~~ 255 (358)
T 2irm_A 182 TDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNF-----EGVP-LYSTRCIGNYLGKAGYKDCNFLSSATAEPVIFE 255 (358)
T ss_dssp CCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGGG-----TTCT-TCBSBCEECHHHHTTGGGSSSSTTCSSCSSBCC
T ss_pred ecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEecc-----CcCC-EEcccCCcCHHHhccccccccccccCCCCEecc
Confidence 8 8 999999999988 5788999888877631 2223 33999999977653 56789
Q ss_pred CceEE-EEccCCCeEEEEEeCCCccCCC----------HHHHHHHHHhc----CCHHHHHHHHHHHHHh-----------
Q 025288 186 PDVKV-EMITDDTEFIILASDGIWKVMT----------NQEAVDCIKHV----KDAKSAAKHLIEHAVS----------- 239 (255)
Q Consensus 186 p~~~~-~~l~~~~d~lll~SDGl~d~l~----------~~~i~~~~~~~----~~~~~~a~~l~~~a~~----------- 239 (255)
|++.. +++.++++|||||||||||.++ ++++.+++... .+|+++|+.|++.|+.
T Consensus 256 Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~~~~ 335 (358)
T 2irm_A 256 PEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQAHHDTYMQLVE 335 (358)
T ss_dssp CEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhccccc
Confidence 99995 9999865679999999999999 89999999864 7999999999999976
Q ss_pred ----CC--CCCCceEEEEEec
Q 025288 240 ----RK--SKDDISCIVVKFH 254 (255)
Q Consensus 240 ----~~--~~Dn~Tvivv~i~ 254 (255)
+| +.||+|+|||+++
T Consensus 336 ~~~~~Gg~~~DNiTvivv~~~ 356 (358)
T 2irm_A 336 EHRSVTFNSRDDVTLLIRNFN 356 (358)
T ss_dssp SSCCCCCCEECCEEEEEEESC
T ss_pred cccccCCCCCCCeEEEEEeCC
Confidence 46 8899999999986
No 15
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=1.1e-43 Score=308.52 Aligned_cols=246 Identities=23% Similarity=0.318 Sum_probs=200.9
Q ss_pred ceeeeEEeecCCCCC-------CCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCC----CCCccH
Q 025288 4 HITHGYHLVKGKSNH-------AMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEP----DFWTDT 72 (255)
Q Consensus 4 ~~~~~~~s~~G~~~~-------~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~----~~~~~~ 72 (255)
.+.+|.++.+|.|.. .|||++++.. ...+..+|+|||||||+.+|+++++.+.+.|.+.. ....++
T Consensus 26 ~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~ 102 (401)
T 2j4o_A 26 LSGVGSASNRSYSADGKGTESHPPEDSWLKFR---SENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADV 102 (401)
T ss_dssp TEEEEEECCEEECSSSSCEECCCCCEEEEEEE---ETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCCTTSCHHHH
T ss_pred cCceeEEecccccccccccCCCCCCceEEEec---CCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhhcccchhhH
Confidence 578999999999883 5999998642 24678899999999999999999999998886431 112356
Q ss_pred HHHHHHHHHHHHHHHHHhhc------------------------------------ccCCCccceEEEEEEeCCEEEEEE
Q 025288 73 ESAIRRAYHMTDTKILEQAF------------------------------------VLGKGGSTAVTAILINGQKLVVAN 116 (255)
Q Consensus 73 ~~~l~~~~~~~~~~l~~~~~------------------------------------~~~~~~~tt~~~~~i~~~~~~~~~ 116 (255)
...|+++|..+++.+.+... .....+|||++++++.+++++++|
T Consensus 103 ~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~l~van 182 (401)
T 2j4o_A 103 RRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVAN 182 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEECCEEEEEE
Confidence 78899999999888765321 012368999999999999999999
Q ss_pred eCCceEEEEeCC----eeeeCCCCCCCc--hHHHHHHHcCCeEecCCCCCCccCCccccccccCCccCc-----------
Q 025288 117 VGDSRAVISKNG----VAKQLSVDHEPS--KEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLK----------- 179 (255)
Q Consensus 117 ~GDsr~~~~r~~----~~~~lt~dh~~~--~e~~~~~~~~g~~~~~~~~~~~~~~~~~lt~~lG~~~~~----------- 179 (255)
+||||+|++|++ ++.+||.||++. .|+.|+...+|.+.... ..+..+...+||+||+..+|
T Consensus 183 vGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~--~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~ 260 (401)
T 2j4o_A 183 VGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIK--QVGIICGQESTRRIGDYKVKYGYTDIDLLSA 260 (401)
T ss_dssp ESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHH--HHCCBTTBCCSBCEECHHHHHSGGGSTTTTT
T ss_pred ccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeecc--CccccCCcccccccCCHhhcccccccccccc
Confidence 999999999988 999999999998 57888988887653110 11334556899999997655
Q ss_pred ---CCccCCCceEE-EEccCCCeEEEEEeCCCccCC--------CHHHHHHHHHh----cCCHHHHHHHHHHHHHh----
Q 025288 180 ---IHLSSEPDVKV-EMITDDTEFIILASDGIWKVM--------TNQEAVDCIKH----VKDAKSAAKHLIEHAVS---- 239 (255)
Q Consensus 180 ---~~~~~~p~~~~-~~l~~~~d~lll~SDGl~d~l--------~~~~i~~~~~~----~~~~~~~a~~l~~~a~~---- 239 (255)
.++..+|++.. +++.++++|||||||||||.+ +++++.+++.. ..+++.+|+.|++.|+.
T Consensus 261 ~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~~~~ 340 (401)
T 2j4o_A 261 AKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSD 340 (401)
T ss_dssp CSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhh
Confidence 35678999996 999985569999999999999 79999999976 47999999999999885
Q ss_pred ---CCC--------CCCceEEEEEec
Q 025288 240 ---RKS--------KDDISCIVVKFH 254 (255)
Q Consensus 240 ---~~~--------~Dn~Tvivv~i~ 254 (255)
+|+ .||+|||||+++
T Consensus 341 a~~~G~~~~~~~~~~DNiTvivv~~~ 366 (401)
T 2j4o_A 341 TFASGGERARFCPRHEDMTLLVRNFG 366 (401)
T ss_dssp HHHSCSSGGGGCSEECCEEEEEEEEB
T ss_pred hhhcCCcccccCCCCCCeEEEEEEcC
Confidence 665 899999999986
No 16
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=1.9e-42 Score=280.84 Aligned_cols=227 Identities=20% Similarity=0.243 Sum_probs=189.5
Q ss_pred CCcceeeeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCch--HHHHHHHHHHHHHHHcCCCCCccHHHHHHH
Q 025288 1 MSKHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGH--DVANYLQTHLFDNILKEPDFWTDTESAIRR 78 (255)
Q Consensus 1 ~~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~--~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~ 78 (255)
|+..|+++..|++|..+..|||++++ +..+|+|||||||+ .+|.++...+.+.+... .+ ...+++
T Consensus 2 m~~~~~~~~~s~~G~~r~~neD~~~~--------~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~----~~-~~~l~~ 68 (234)
T 2jfr_A 2 MASVLSAATATDQGPVRENNQDACLA--------DGILYAVADGFGARGHHASATALKTLSAGFAAA----PD-RDGLLE 68 (234)
T ss_dssp CCSEEEEEEEEECCSSCSSCCEEEEE--------ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHS----CS-HHHHHH
T ss_pred CceeEEEEEecCCCCCCCcCCCccee--------CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcC----Cc-HHHHHH
Confidence 77889999999999944499999964 34699999999976 66666666666665443 12 788999
Q ss_pred HHHHHHHHHHHhhcccCCCccceEEEEEEeCCE---EEEEEeCCceEEEEeCCeeeeCCCCCCCchHHHHHHHcCCeEec
Q 025288 79 AYHMTDTKILEQAFVLGKGGSTAVTAILINGQK---LVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSN 155 (255)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~tt~~~~~i~~~~---~~~~~~GDsr~~~~r~~~~~~lt~dh~~~~e~~~~~~~~g~~~~ 155 (255)
+|..+++.+..........+|||++++++.++. ++++|+||||+|++|++++.++|+||++..+ .++ .|.+.
T Consensus 69 ~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~--~~~--~g~i~- 143 (234)
T 2jfr_A 69 AVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGE--LVR--MGEIT- 143 (234)
T ss_dssp HHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBHHHH--HHH--TTSSC-
T ss_pred HHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCHHHH--HHH--cCCCC-
Confidence 999999999887654322389999999999888 9999999999999999999999999986543 222 34444
Q ss_pred CCCCCCccCCccccccccCCccCcCCccCCCceEEEEccCCCeEEEEEeCCCccCCCHHHHHHHHHhcCCHHHHHHHHHH
Q 025288 156 IPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIE 235 (255)
Q Consensus 156 ~~~~~~~~~~~~~lt~~lG~~~~~~~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~l~~ 235 (255)
+.+...+++++.+||++|+.. ..+|++..+++.+ +|+||||||||||.++++++.+++ ...+|+++++.|++
T Consensus 144 -~~~~~~~~~~~~~tralG~~~-----~~~~~~~~~~l~~-gd~lll~SDGl~d~~~~~~i~~~~-~~~~~~~~a~~l~~ 215 (234)
T 2jfr_A 144 -RHEARWHPQRHLLTRALGIGP-----HIGPDVFGIDCGP-GDRLLISSDGLFAAADEALIVDAA-TSPDPQVAVRRLVE 215 (234)
T ss_dssp -HHHHTTCTTTTCBSCCBSSSS-----CCCCEEEECCCCT-TCEEEEECGGGGTTSCHHHHHHHH-TCSSHHHHHHHHHH
T ss_pred -HHHHhcCcccceeeecCcCCC-----CceeEEEEEecCC-CCEEEEECCCCccccCHHHHHHHH-ccCCHHHHHHHHHH
Confidence 223345678889999999987 6899999999998 699999999999999999999999 77899999999999
Q ss_pred HHHhCCCCCCceEEEEEe
Q 025288 236 HAVSRKSKDDISCIVVKF 253 (255)
Q Consensus 236 ~a~~~~~~Dn~Tvivv~i 253 (255)
.|+.+++.||+|+|++++
T Consensus 216 ~a~~~g~~DniTvivv~~ 233 (234)
T 2jfr_A 216 VANDAGGSDNTTVVVIDL 233 (234)
T ss_dssp HHHHTTCCSCEEEEEEEE
T ss_pred HHHHcCCCCCeEEEEEEe
Confidence 999999999999999987
No 17
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=2.8e-40 Score=291.10 Aligned_cols=246 Identities=30% Similarity=0.417 Sum_probs=190.6
Q ss_pred eeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcC---------------------
Q 025288 7 HGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKE--------------------- 65 (255)
Q Consensus 7 ~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~--------------------- 65 (255)
.++.+.+|..+..|||++.+.... ..+..+|||||||||+.+|+++++.+++.+...
T Consensus 39 ~~~~s~~g~~R~~nED~~~v~~~~--~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~ 116 (467)
T 2pnq_A 39 LGFDSNRLPANAPIEDRRSATTCL--QTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALL 116 (467)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEES--SSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CC
T ss_pred EEEEeeccCCCCCCCCceeeeecc--CCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccccc
Confidence 445677777666999999764321 245679999999999999999999988766421
Q ss_pred ---------CC-----------------------------CCccHHHHHHHHHHHHHHHHHHhhcc------------cC
Q 025288 66 ---------PD-----------------------------FWTDTESAIRRAYHMTDTKILEQAFV------------LG 95 (255)
Q Consensus 66 ---------~~-----------------------------~~~~~~~~l~~~~~~~~~~l~~~~~~------------~~ 95 (255)
.. ....+...|+++|..+++.+...... ..
T Consensus 117 ~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~ 196 (467)
T 2pnq_A 117 PILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRV 196 (467)
T ss_dssp CCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHH
T ss_pred ccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccC
Confidence 00 01156789999999999999765421 12
Q ss_pred CCccceEEEEEEeCCEEEEEEeCCceEEEEe---CC--eeeeCCCCCCCc--hHHHHHHHcCCeEec-CCCCCCccCCcc
Q 025288 96 KGGSTAVTAILINGQKLVVANVGDSRAVISK---NG--VAKQLSVDHEPS--KEKRLIESRGGFVSN-IPGDVPRVDGQL 167 (255)
Q Consensus 96 ~~~~tt~~~~~i~~~~~~~~~~GDsr~~~~r---~~--~~~~lt~dh~~~--~e~~~~~~~~g~~~~-~~~~~~~~~~~~ 167 (255)
..+|||++++++.++.++++|+||||+|++| +| .+.+||.||++. .|.+|+...++.... .-...++..+.+
T Consensus 197 ~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l 276 (467)
T 2pnq_A 197 AFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLL 276 (467)
T ss_dssp HHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTTB
T ss_pred CCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCcccccc
Confidence 4689999999999999999999999999998 47 799999999987 677888877653210 000123556778
Q ss_pred ccccccCCccCcC---------------------------------CccCCCceEEEEccCCCeEEEEEeCCCccCCCHH
Q 025288 168 AVARAFGDKSLKI---------------------------------HLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQ 214 (255)
Q Consensus 168 ~lt~~lG~~~~~~---------------------------------~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~~ 214 (255)
.+||+||+..+|. .+..+|++..+++.+++.|||||||||||.++++
T Consensus 277 ~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~ 356 (467)
T 2pnq_A 277 MPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQ 356 (467)
T ss_dssp SSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHH
T ss_pred ccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCChH
Confidence 9999999987652 3678999999999995458999999999999999
Q ss_pred HHHHHHHhcC------CH------------------------------HHHHHHHHHHHHhCC-----------------
Q 025288 215 EAVDCIKHVK------DA------------------------------KSAAKHLIEHAVSRK----------------- 241 (255)
Q Consensus 215 ~i~~~~~~~~------~~------------------------------~~~a~~l~~~a~~~~----------------- 241 (255)
++.+++.... +| +.+|..|+..|+.++
T Consensus 357 eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~~~ 436 (467)
T 2pnq_A 357 DVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLP 436 (467)
T ss_dssp HHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC-------------------
T ss_pred HHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhhcCC
Confidence 9999997632 34 567899999999875
Q ss_pred ------CCCCceEEEEEec
Q 025288 242 ------SKDDISCIVVKFH 254 (255)
Q Consensus 242 ------~~Dn~Tvivv~i~ 254 (255)
..||+|||||+++
T Consensus 437 ~~~~R~~~DdITViVv~~~ 455 (467)
T 2pnq_A 437 EELARMYRDDITIIVVQFN 455 (467)
T ss_dssp ------CCSCEEEEEEEEC
T ss_pred ccccccCCCCcEEEEEEeC
Confidence 3899999999985
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00 E-value=3.4e-38 Score=251.83 Aligned_cols=197 Identities=17% Similarity=0.186 Sum_probs=156.2
Q ss_pred CCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHhhcc--cCCCccceEEEEEEe--
Q 025288 33 DNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMTDTKILEQAFV--LGKGGSTAVTAILIN-- 108 (255)
Q Consensus 33 ~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~tt~~~~~i~-- 108 (255)
+++..+|+|||||||+..++.+++.+++.+.+....... +.+++..+|+.+...... ...++|||++++++.
T Consensus 7 ~~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~----~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~ 82 (211)
T 3rnr_A 7 GGDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGS----PLDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLR 82 (211)
T ss_dssp ETTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCC----HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETT
T ss_pred CCCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCC----HHHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeC
Confidence 567789999999999888888887777766543111122 357888888888776532 235799999999999
Q ss_pred CCEEEEEEeCCceEEEEeCCeeeeCCCCCCCchHHHHHHHcCCeEecCCCCCCccCCccccccccCCccCcCCccCCCce
Q 025288 109 GQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDV 188 (255)
Q Consensus 109 ~~~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~lt~~lG~~~~~~~~~~~p~~ 188 (255)
+++++++|+||||+|++|++++.++|+||++.++ .++ .|. + + ..++.++.+|+++|... ..+|++
T Consensus 83 ~~~~~~anvGDSr~yl~r~g~~~~lt~dh~~~~~--~~~--~g~-~--~---~~~~~~~~ltralG~~~-----~~~~~~ 147 (211)
T 3rnr_A 83 DGTLEWASVGDCRVYLFKGGRLSRLSLDHNVSSE--MVL--LGR-G--P---VPGPAGEMITSFIGIEN-----LTEIST 147 (211)
T ss_dssp TTEEEEEEESSCEEEEEETTEEEECCCCCBHHHH--HHH--TTS-C--C---CCSHHHHCBSCCBTCSS-----CCCCEE
T ss_pred CCEEEEEEEccCeEEEEeCCEEEEECCCcHHHHH--HHH--cCC-C--h---hhCCCccEEecccCCCC-----CcceeE
Confidence 9999999999999999999999999999976544 333 344 4 2 46677889999999887 678888
Q ss_pred --EEEEccCCCeEEEEEeCCCccCCCHHHHHHHHHhcCCHHHHHHHHHHHHHhCC--CCCCceEEEEEe
Q 025288 189 --KVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRK--SKDDISCIVVKF 253 (255)
Q Consensus 189 --~~~~l~~~~d~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~--~~Dn~Tvivv~i 253 (255)
..+++.+ +|++|||||||||.++++++.+++....+ |+.|++.|++++ +.||+|+|||++
T Consensus 148 ~~~~~~l~~-gd~llL~SDGl~d~~~~~~i~~~l~~~~~----a~~L~~~a~~~g~~~~DNiTvivv~L 211 (211)
T 3rnr_A 148 SEAPLPLEA-GEGVLVVSDGVYRSLHEDRIAMALSRGSD----ARGILQEVEAQGRPYQDNATLALVIL 211 (211)
T ss_dssp CSSCEECCT-TCEEEEEEC-----CCTTEEEEEECTTSC----HHHHHHHHHHSCTTSCSSCEEEEEEC
T ss_pred ecceecCCC-CCEEEEEcCCCCCCcCHHHHHHHHhcCCh----HHHHHHHHHHcCCCCCCceEEEEEeC
Confidence 7889998 79999999999999999999888876444 999999999999 999999999985
No 19
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.93 E-value=3.7e-24 Score=173.96 Aligned_cols=205 Identities=16% Similarity=0.094 Sum_probs=155.6
Q ss_pred CCcceeeeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHH
Q 025288 1 MSKHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAY 80 (255)
Q Consensus 1 ~~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 80 (255)
|+..+.+++.+.....+..+.|.|.+.. ..++..+++|+||+|++..|..++..+...+......... +.+++
T Consensus 7 m~~~~~~~~~~~~~~~~~vgGD~y~~~~---~~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~~----~~~~l 79 (242)
T 3pu9_A 7 MPVTIELAVAKTHKFGTRESGDTVELVE---RPGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGVR----DGAAA 79 (242)
T ss_dssp CCEEEEEEEEEECCTTCSSCSEEEEEEE---CTTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCC----HHHHH
T ss_pred CCcEEEEEEEecccCccccCCceEEEEE---eCCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHH
Confidence 6667888888888877778999997642 2356678999999999988888877655444321111112 45677
Q ss_pred HHHHHHHHHhhcccCCCccceEEEEEEe--CCEEEEEEeCCceEEEEeCCeeeeCCCCCCCchHHHHHHHcCCeEecCCC
Q 025288 81 HMTDTKILEQAFVLGKGGSTAVTAILIN--GQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPG 158 (255)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~~e~~~~~~~~g~~~~~~~ 158 (255)
..+|+.+..... ..+.+|++++.++ ++.++++|+||+++|++|++++.+++.++.+
T Consensus 80 ~~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~------------------- 137 (242)
T 3pu9_A 80 RAAHDFLYAMRD---GKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGGR------------------- 137 (242)
T ss_dssp HHHHHHHHHHTT---TCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCCC-------------------
T ss_pred HHHHHHHHhccC---CCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCcc-------------------
Confidence 888888865542 3577899888886 6799999999999999999999999887743
Q ss_pred CCCccCCccccccccCCccCcCCccCCCceEEEEccCCCeEEEEEeCCCccCCC-------HHHHHHHHH-hcCCHHHHH
Q 025288 159 DVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMT-------NQEAVDCIK-HVKDAKSAA 230 (255)
Q Consensus 159 ~~~~~~~~~~lt~~lG~~~~~~~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~-------~~~i~~~~~-~~~~~~~~a 230 (255)
+|... ..+++..++++.+ ||.|+||||||++..+ .+++..+.. ...+|++++
T Consensus 138 --------------lG~~~-----~~~~~~~~~~l~~-Gd~lll~TDGl~e~~~~~~~~~g~~~l~~l~~~~~~~~~~~~ 197 (242)
T 3pu9_A 138 --------------IGIYR-----HTRPRVLEFPAEP-GLTVILVSDGIIGAGGRRGQPLEFLATGGRVAGPETPAQAIA 197 (242)
T ss_dssp --------------BSSCT-----TCCCEEEEEECCT-TCEEEEECHHHHTTTTTTTCCCCHHHHHHHHCCTTCCHHHHH
T ss_pred --------------ccccC-----CCCceEEEEEeCC-CCEEEEECcCcccCCCCccccccHHHHHHHHhccCCCHHHHH
Confidence 33222 3567778888988 7999999999998654 477765554 346899999
Q ss_pred HHHHHHHHhCC---CCCCceEEEEEec
Q 025288 231 KHLIEHAVSRK---SKDDISCIVVKFH 254 (255)
Q Consensus 231 ~~l~~~a~~~~---~~Dn~Tvivv~i~ 254 (255)
+.|++.+...+ ..||+|++++++.
T Consensus 198 ~~l~~~~~~~~~~~~~DDiTvlvv~~~ 224 (242)
T 3pu9_A 198 DELLEAALVADDGRAGDDMTVVVLRLR 224 (242)
T ss_dssp HHHHHHHHHHTTTSCSSCEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCCCCeEEEEEEEe
Confidence 99999998765 5799999999984
No 20
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.93 E-value=6.6e-25 Score=178.43 Aligned_cols=204 Identities=16% Similarity=0.163 Sum_probs=142.8
Q ss_pred CcceeeeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHH
Q 025288 2 SKHITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYH 81 (255)
Q Consensus 2 ~~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 81 (255)
.+.+.+++.+.....+..+.|.|.+... .++..+++|+||+|++..|..++..+...+........ .+.+++.
T Consensus 5 ~~~i~~~~~~~~~p~~~v~GD~y~~~~~---~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~~----~~~~~l~ 77 (242)
T 3t91_A 5 SYRVSTGAAHAAKGGGLVSGDSYSMMEL---GARKYAAAISDGMGNGARAHFESNETIKLLEKILESGI----DEKIAIK 77 (242)
T ss_dssp CCEEEEEEEEECTTSCSCCSCEEEEEEE---TTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHTC----CHHHHHH
T ss_pred eEEEEEEeehhcCCccccCCcEEEEEEe---CCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhCC----CHHHHHH
Confidence 4567888888888777799999976321 45667899999999876655544444333322100011 2456777
Q ss_pred HHHHHHHHhhcccCCCccceEEEEEEe--CCEEEEEEeCCceEEEEeCCeeeeCCCCCCCchHHHHHHHcCCeEecCCCC
Q 025288 82 MTDTKILEQAFVLGKGGSTAVTAILIN--GQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGD 159 (255)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~~e~~~~~~~~g~~~~~~~~ 159 (255)
.+|+.+..... ..+.+|+++++++ +++++++|+||+++|++|++++.+++..+.+
T Consensus 78 ~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~-------------------- 134 (242)
T 3t91_A 78 TINSILSLRTT---DEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNLP-------------------- 134 (242)
T ss_dssp HHHHHHTTC-------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC-----------------------
T ss_pred HHHHHHHhcCC---CCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCCCce--------------------
Confidence 77887765422 3577888888886 7899999999999999999999888765532
Q ss_pred CCccCCccccccccCCccCcCCccCCCceEEEEccCCCeEEEEEeCCCccCCC-----HHHHHHHHHh--cCCHHHHHHH
Q 025288 160 VPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMT-----NQEAVDCIKH--VKDAKSAAKH 232 (255)
Q Consensus 160 ~~~~~~~~~lt~~lG~~~~~~~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~-----~~~i~~~~~~--~~~~~~~a~~ 232 (255)
+|... ..+++..++++.+ ||.|+||||||||.++ ...+..++.. ..++++.++.
T Consensus 135 -------------lG~~~-----~~~~~~~~~~l~~-GD~lll~SDGl~e~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 195 (242)
T 3t91_A 135 -------------IGIIN-----EFDVEVVSEQLKA-GDLLIMMSDGIFEGPKHVENHDLWMKRKMKGLKTNDPQEIADL 195 (242)
T ss_dssp ---------------CCC-----TTCEEEEEEECCT-TCEEEEECHHHHTCSTTCSCHHHHHHHHHHTCCCCCHHHHHHH
T ss_pred -------------eEecC-----CCcceEEEEEeCC-CCEEEEECCCcccCCCcccchHHHHHHHHHHhcCCCHHHHHHH
Confidence 22222 3456777888888 7999999999999998 5566777763 4689999999
Q ss_pred HHHHHHhCC-C--CCCceEEEEEec
Q 025288 233 LIEHAVSRK-S--KDDISCIVVKFH 254 (255)
Q Consensus 233 l~~~a~~~~-~--~Dn~Tvivv~i~ 254 (255)
|++.+...+ . .||+|+|++++.
T Consensus 196 l~~~~~~~~~~~~~DDiTvv~i~~~ 220 (242)
T 3t91_A 196 LMEEVIRTRSGQIEDDMTVVVVRID 220 (242)
T ss_dssp HHHHHHHHTTSCCCSCEEEEEEEEE
T ss_pred HHHHHHHHcCCCCCCceEEEEEEEe
Confidence 999998865 3 599999999985
No 21
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.88 E-value=6.8e-21 Score=149.40 Aligned_cols=189 Identities=12% Similarity=0.067 Sum_probs=142.6
Q ss_pred ceeeeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHH
Q 025288 4 HITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMT 83 (255)
Q Consensus 4 ~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 83 (255)
.+.++..+........+.|.|.+.. .++..+++|+||+|.+..|..++..+...+.... ..+ ..+.+..+
T Consensus 3 ~~~~~~~~~p~~~~~v~GD~y~~~~----~~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~~--~~~----p~~il~~l 72 (193)
T 3zt9_A 3 KLEVGIYTRAREGEIACGDACLVKR----VEGVIFLAVGDGIGHGPEAARAAEIAIASMESSM--NTG----LVNIFQLC 72 (193)
T ss_dssp CCCEEEEEECCTTCSSCSEEEEEEE----ETTEEEEEEEEESSSHHHHHHHHHHHHHHHHHHT--TSC----HHHHHHHH
T ss_pred ccEEEEEEeccCCCCCCCCeEEEEE----eCCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcc--cCC----HHHHHHHH
Confidence 5778888888877778999998632 3567899999999999888888888777776532 122 34566677
Q ss_pred HHHHHHhhcccCCCccceEEEEEEe--CCEEEEEEeCCceEEEEeCCeeeeCCCCCCCchHHHHHHHcCCeEecCCCCCC
Q 025288 84 DTKILEQAFVLGKGGSTAVTAILIN--GQKLVVANVGDSRAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVP 161 (255)
Q Consensus 84 ~~~l~~~~~~~~~~~~tt~~~~~i~--~~~~~~~~~GDsr~~~~r~~~~~~lt~dh~~~~e~~~~~~~~g~~~~~~~~~~ 161 (255)
|+.+.. ..+.|++++.++ ++++.++++|+++.|++|+++...+.....
T Consensus 73 n~~l~~-------~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~~g----------------------- 122 (193)
T 3zt9_A 73 HRELRG-------TRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLATPG----------------------- 122 (193)
T ss_dssp HHHHTT-------SSCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCBCC-----------------------
T ss_pred HHHHhc-------cCceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCCCC-----------------------
Confidence 777742 234666677776 679999999999999999987665432220
Q ss_pred ccCCccccccccCCccCcCCccCCCceEEEEccCCCeEEEEEeCCCccCCCHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 025288 162 RVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRK 241 (255)
Q Consensus 162 ~~~~~~~lt~~lG~~~~~~~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 241 (255)
.+|... ..+++..++++.+ ||.|+|+|||+++.+.++++..+. ..+|+++|+.|++.+ .+
T Consensus 123 ----------~lG~~~-----~~~~~~~~~~l~~-gd~l~l~sDGl~e~~~~~~~~~~~--~~~~~~~a~~l~~~~--~~ 182 (193)
T 3zt9_A 123 ----------ILGYNY-----PHQLLIAKGSYQE-GDLFLIHSDGIQEGAVPLALLANY--RLTAEELVRLIGEKY--GR 182 (193)
T ss_dssp ----------BBTTBC-----CSSCCCEEEECCT-TCEEEEECTTSCTTCSCGGGGGCT--TSCHHHHHHHHHHHH--CC
T ss_pred ----------ceeccC-----CccceeEEeccCC-CCEEEEECCCCCCccChhhhhchh--cCCHHHHHHHHHHHh--Cc
Confidence 123211 2256677888988 799999999999999998877655 358999999999997 35
Q ss_pred CCCCceEEEEE
Q 025288 242 SKDDISCIVVK 252 (255)
Q Consensus 242 ~~Dn~Tvivv~ 252 (255)
..||+|++|++
T Consensus 183 ~~Dd~tvlv~r 193 (193)
T 3zt9_A 183 RDDDVAVIVAR 193 (193)
T ss_dssp TTSCEEEEEEC
T ss_pred CCCCeEEEEEC
Confidence 78999999985
No 22
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.85 E-value=1e-19 Score=148.79 Aligned_cols=201 Identities=15% Similarity=0.061 Sum_probs=129.8
Q ss_pred eeeeEEeecCCCCCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHH---cC-CCCCccHHHHHHHHH
Q 025288 5 ITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNIL---KE-PDFWTDTESAIRRAY 80 (255)
Q Consensus 5 ~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~---~~-~~~~~~~~~~l~~~~ 80 (255)
+.+++...... ....|.|.++. ..++..+++|+||+|++..|..++..+...+. .. ..........+.+++
T Consensus 38 ~~~~~~~~p~~--~vgGD~yd~~~---~~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~l 112 (255)
T 3f79_A 38 LEFSHRIIPSL--YLSGDFVDYFR---VDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVL 112 (255)
T ss_dssp EEEEEEEECSS--SSCSEEEEEEE---ETTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC----CHHHHH
T ss_pred EEEEEEEeEhh--hcCceEEeEEE---eCCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCHHHHH
Confidence 44555554442 36889885432 24567899999999977666666555443332 11 000111233466788
Q ss_pred HHHHHHHHHhhcccCCCccceEEEEEEe--CCEEEEEEeCCc-eEEEEeCCeeeeCCCCCCCchHHHHHHHcCCeEecCC
Q 025288 81 HMTDTKILEQAFVLGKGGSTAVTAILIN--GQKLVVANVGDS-RAVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIP 157 (255)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~tt~~~~~i~--~~~~~~~~~GDs-r~~~~r~~~~~~lt~dh~~~~e~~~~~~~~g~~~~~~ 157 (255)
..+|+.+... ..++++|+++++++ +++++++|+|++ +.|++++|++.+++.++.+
T Consensus 113 ~~ln~~l~~~----~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~------------------ 170 (255)
T 3f79_A 113 AHINRGLINT----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP------------------ 170 (255)
T ss_dssp HHHHHHHBTT----BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC----------------------
T ss_pred HHHHHHHHhc----CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCCce------------------
Confidence 8888888642 25688999999995 789999999995 5899999999988876632
Q ss_pred CCCCccCCccccccccCCccCcCCccCCCceEEEEccCCCeEEEEEeCCCccCCCHHH-------HHHHHHh-cCCHHHH
Q 025288 158 GDVPRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTNQE-------AVDCIKH-VKDAKSA 229 (255)
Q Consensus 158 ~~~~~~~~~~~lt~~lG~~~~~~~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~~~-------i~~~~~~-~~~~~~~ 229 (255)
+|... ..+++..++++.+ ||.|+||||||++.++.++ +.+++.. ..+++++
T Consensus 171 ---------------lG~~~-----~~~~~~~~~~l~~-gd~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~~~~~~~~ 229 (255)
T 3f79_A 171 ---------------VGLFD-----DATYDDRVMELPP-SFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDGL 229 (255)
T ss_dssp ----------------CCSS-----CCCCCC---BCCS-SEEEEEECSCCCCCSCC---CCTTTSSHHHHHHHSCSSHHH
T ss_pred ---------------EEEcC-----CCceEEEEEEECC-CCEEEEECCCcCcccCCCcchhhHHHHHHHHHhcCCCHHHH
Confidence 33222 3455666778888 7999999999999998777 7777764 3467888
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEec
Q 025288 230 AKHLIEHAVSRKSKDDISCIVVKFH 254 (255)
Q Consensus 230 a~~l~~~a~~~~~~Dn~Tvivv~i~ 254 (255)
++.|. .+...+..||+|+++++.+
T Consensus 230 ~~~l~-~~~~~~~~DDiTvl~v~~~ 253 (255)
T 3f79_A 230 RQVFG-LANLAEMPDDIALLVLSRN 253 (255)
T ss_dssp HHHC------CCSSSCEEEEEEEEC
T ss_pred HHHHH-hccCCCCCCCEEEEEEEec
Confidence 88877 5667788899999999864
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.53 E-value=5.2e-12 Score=109.51 Aligned_cols=198 Identities=11% Similarity=0.095 Sum_probs=122.6
Q ss_pred eeeeEEeecCCC-CCCCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHH
Q 025288 5 ITHGYHLVKGKS-NHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEPDFWTDTESAIRRAYHMT 83 (255)
Q Consensus 5 ~~~~~~s~~G~~-~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 83 (255)
+.++........ .....|.|.+.. .++..+++|+|++|.+-.|..++..+...+........+ ..+++..+
T Consensus 36 ~~~~~~y~P~~~~~~vgGD~y~~~~----~~~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~~~~----p~~il~~l 107 (399)
T 3ke6_A 36 ADIAAEYLVAAEDTAAGGDWFDALA----LGDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAGYT----VVEALEAV 107 (399)
T ss_dssp EEEEEEEECSSSSCSCCSEEEEEEE----CSSEEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHTTCC----HHHHHHHH
T ss_pred eEEEEEEEECCCCCCCCCceEEEEE----ECCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCC----HHHHHHHH
Confidence 445554444432 236789887543 233789999999997666655555444433321111122 23455555
Q ss_pred HHHHHHhhcccCCCccceEEEEEEe--CCEEEEEEeCCceEEEEe-CCeeeeCCCCCCCchHHHHHHHcCCeEecCCCCC
Q 025288 84 DTKILEQAFVLGKGGSTAVTAILIN--GQKLVVANVGDSRAVISK-NGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDV 160 (255)
Q Consensus 84 ~~~l~~~~~~~~~~~~tt~~~~~i~--~~~~~~~~~GDsr~~~~r-~~~~~~lt~dh~~~~e~~~~~~~~g~~~~~~~~~ 160 (255)
|. +... ....+.+|++++.++ ++.+.++++|+...|+++ +|+...+..++..
T Consensus 108 n~-~~~~---~~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~~~--------------------- 162 (399)
T 3ke6_A 108 DR-FHKQ---VPGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAG--------------------- 162 (399)
T ss_dssp HH-HGGG---STTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCSCC---------------------
T ss_pred HH-HHHh---cCCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCCCc---------------------
Confidence 65 3222 224567788877776 689999999999999998 6777776655421
Q ss_pred CccCCccccccccCCccCcCCccCCCceEEEEccCCCeEEEEEeCCCccCCCH------HHHHHHHHhc--C-------C
Q 025288 161 PRVDGQLAVARAFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTN------QEAVDCIKHV--K-------D 225 (255)
Q Consensus 161 ~~~~~~~~lt~~lG~~~~~~~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~------~~i~~~~~~~--~-------~ 225 (255)
.+|.. ......++++.+ ||.|+|+|||+.|.... +.+.+++... . +
T Consensus 163 -----------plG~~-------~~~~~~~~~l~~-Gd~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~ 223 (399)
T 3ke6_A 163 -----------PLGSG-------TGFPVRSEVLNI-GDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDA 223 (399)
T ss_dssp -----------CTTSS-------CCCCCEEEECCT-TCEEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC---------
T ss_pred -----------ceECC-------CCceeEEEEECC-CCEEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccccccccC
Confidence 12221 234556788888 79999999999998765 4555555431 1 3
Q ss_pred HHHHHHHHHHHHHh-----CCCCCCceEEEEEec
Q 025288 226 AKSAAKHLIEHAVS-----RKSKDDISCIVVKFH 254 (255)
Q Consensus 226 ~~~~a~~l~~~a~~-----~~~~Dn~Tvivv~i~ 254 (255)
|+..++.+++.+++ ....||+|+++++++
T Consensus 224 ~~~~~~~l~~~~~~~~~~~~~~~DDitvl~vr~~ 257 (399)
T 3ke6_A 224 PARPIDRLCSDTLELLLRSTGYNDDVTLLAMQRR 257 (399)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCCSSCEEEEEEEEC
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCceEEEEEEee
Confidence 44444455554443 456799999999976
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=99.23 E-value=5.5e-10 Score=96.51 Aligned_cols=187 Identities=17% Similarity=0.102 Sum_probs=104.0
Q ss_pred CCCceeEeeecccCCCceEEEEEEeCCCchHHHHHHHH---HHHHHHHcC-CCCCccHHHHHHHHHHHHHHHHHHhhccc
Q 025288 19 AMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQT---HLFDNILKE-PDFWTDTESAIRRAYHMTDTKILEQAFVL 94 (255)
Q Consensus 19 ~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~---~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 94 (255)
...|.|.++. ..++...++|+|+.|.+-.|...+. .+++.+... ..............+..+|..+...
T Consensus 189 vgGD~yd~~~---~~~~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~l~~~---- 261 (394)
T 3eq2_A 189 LSGDFVDYFR---VDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINT---- 261 (394)
T ss_dssp -CCCEEECCE---ETTTEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCCHHHHHHHHHHHHHHT----
T ss_pred cCccEEeEEE---eCCCcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCCHHHHHHHHHHHHhcc----
Confidence 6788885422 2456789999997774433333332 333333221 1100000112345666777777632
Q ss_pred CCCccceEEEEEEe--CCEEEEEEeCCce-EEEEeCCeeeeCCCCCCCchHHHHHHHcCCeEecCCCCCCccCCcccccc
Q 025288 95 GKGGSTAVTAILIN--GQKLVVANVGDSR-AVISKNGVAKQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVAR 171 (255)
Q Consensus 95 ~~~~~tt~~~~~i~--~~~~~~~~~GDsr-~~~~r~~~~~~lt~dh~~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~lt~ 171 (255)
......|++.+.++ ++.+.++++|... .++.++|++..+.....+
T Consensus 262 ~~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~p-------------------------------- 309 (394)
T 3eq2_A 262 KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP-------------------------------- 309 (394)
T ss_dssp TCCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC--C--------------------------------
T ss_pred CcCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCce--------------------------------
Confidence 13456777777776 6899999999865 677788888776543321
Q ss_pred ccCCccCcCCccCCCceEEEEccCCCeEEEEEeCCCccCCCH-------HHHHHHHHhcCCHHHHHHHHHHHHHh---CC
Q 025288 172 AFGDKSLKIHLSSEPDVKVEMITDDTEFIILASDGIWKVMTN-------QEAVDCIKHVKDAKSAAKHLIEHAVS---RK 241 (255)
Q Consensus 172 ~lG~~~~~~~~~~~p~~~~~~l~~~~d~lll~SDGl~d~l~~-------~~i~~~~~~~~~~~~~a~~l~~~a~~---~~ 241 (255)
+|... .......++++.+ ||.|+|+|||+.|.... +.+.+.+..... ..+.|.+.... ..
T Consensus 310 -lG~~~-----~~~~~~~~~~l~~-gd~l~l~TDG~~e~~~~~~~~~~~~~l~~~l~~~~~---~~~~l~~~~~~~~~~~ 379 (394)
T 3eq2_A 310 -VGLFD-----DATYDDRVMELPP-SFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGG---TLDGLRQVFGLANLAE 379 (394)
T ss_dssp -CSCCC-----CC--CCEEEECCS-SCEEEECSSCCCC-----CCSTTTTTSHHHHHTTC-----CHHHHHHHSCCCSCC
T ss_pred -eEecC-----CCceEEEEEEeCC-CCEEEEECCCcccccCcccchhhHHHHHHHHHhcch---hHHHHHHHhcccCCCC
Confidence 22211 2344566788888 79999999999997543 344555544222 13334443333 23
Q ss_pred CCCCceEEEEEec
Q 025288 242 SKDDISCIVVKFH 254 (255)
Q Consensus 242 ~~Dn~Tvivv~i~ 254 (255)
..||+|+++++.+
T Consensus 380 ~~DDit~l~i~~~ 392 (394)
T 3eq2_A 380 MPDDIALLVLSRN 392 (394)
T ss_dssp --CCCEEEEEC--
T ss_pred CCCceEEEEEecc
Confidence 4699999999864
No 25
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=42.89 E-value=0.67 Score=41.34 Aligned_cols=74 Identities=7% Similarity=-0.063 Sum_probs=54.1
Q ss_pred ccccccCCccCcCCccCCCceEEEEccCC-Ce----EEEEEeCCCccCCCHHHHHHHHHhc-----CCHHHHHHHHHHHH
Q 025288 168 AVARAFGDKSLKIHLSSEPDVKVEMITDD-TE----FIILASDGIWKVMTNQEAVDCIKHV-----KDAKSAAKHLIEHA 237 (255)
Q Consensus 168 ~lt~~lG~~~~~~~~~~~p~~~~~~l~~~-~d----~lll~SDGl~d~l~~~~i~~~~~~~-----~~~~~~a~~l~~~a 237 (255)
.++||+|-.. ..+.++....+..+ |+ -+++++ ++.+...++.+++... .+.+..++.|++.+
T Consensus 43 ~l~~~~~l~~-----~~~~d~~~~~~~~~ig~~~~~~f~~t~---~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~~ 114 (543)
T 3c4z_A 43 PLSKCEALRE-----SLDLGFEGMCLEQPIGKRLFQQFLRTH---EQHGPALQLWKDIEDYDTADDALRPQKAQALRAAY 114 (543)
T ss_dssp CGGGGHHHHH-----HSCCCHHHHHTSSHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHH
T ss_pred CchHHHHHHh-----ccccCHHHhhccCcccHHHHHHHHhcC---CchhHHHHHHhhhhhhccCchhhHHHHHHHHHHHh
Confidence 5677777655 45666666666552 45 344555 8888887777777552 47889999999999
Q ss_pred HhCCCCCCceEE
Q 025288 238 VSRKSKDDISCI 249 (255)
Q Consensus 238 ~~~~~~Dn~Tvi 249 (255)
+..++.||++.+
T Consensus 115 ~~~~~~d~~~~~ 126 (543)
T 3c4z_A 115 LEPQAQLFCSFL 126 (543)
T ss_dssp TSTTCTTCCTTS
T ss_pred hCchhhhhhccC
Confidence 999999998875
No 26
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=33.26 E-value=33 Score=16.68 Aligned_cols=16 Identities=38% Similarity=0.326 Sum_probs=12.9
Q ss_pred CceEEEEeCCeeeeCC
Q 025288 119 DSRAVISKNGVAKQLS 134 (255)
Q Consensus 119 Dsr~~~~r~~~~~~lt 134 (255)
|..+|+.++|.|..++
T Consensus 9 Dg~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 9 DAQAYVRKFGEWVLLS 24 (27)
T ss_dssp SSCEEEEETTEEEEGG
T ss_pred CcceeEEEcCeEEEcc
Confidence 6788999999887664
No 27
>2nz7_A NOD1, caspase recruitment domain-containing protein 4, CARD4; helix swapped, disulfide bond, apoptosis; 1.90A {Homo sapiens} PDB: 2nsn_A
Probab=30.91 E-value=69 Score=21.11 Aligned_cols=31 Identities=3% Similarity=0.198 Sum_probs=25.6
Q ss_pred CCCHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 025288 210 VMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRK 241 (255)
Q Consensus 210 ~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 241 (255)
.++.++ ..+......+...++.|++.+..+|
T Consensus 41 VL~~ee-~~I~~~~~T~~~kaR~Lld~v~~KG 71 (98)
T 2nz7_A 41 YFSAED-AEIVCACPTQPDKVRKILDLVQSKG 71 (98)
T ss_dssp SSCHHH-HHHHHTCCSHHHHHHHHHHHHHHHC
T ss_pred CCCHHH-HHHHccCCCcHHHHHHHHHHHHHHh
Confidence 567888 7777766899999999999887765
No 28
>4e9m_A Nucleotide-binding oligomerization domain-contain protein 1; innate immunity, RIPK2, protein binding; HET: FLC; 2.15A {Homo sapiens} PDB: 2b1w_A 2dbd_A
Probab=30.40 E-value=68 Score=22.81 Aligned_cols=31 Identities=6% Similarity=0.222 Sum_probs=25.3
Q ss_pred CCCHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 025288 210 VMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRK 241 (255)
Q Consensus 210 ~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 241 (255)
+++.+|. +++....++...+++|++.+..+|
T Consensus 55 vLs~EE~-EiV~~~~T~~dKaRrLLDlV~sKG 85 (144)
T 4e9m_A 55 YFSAEDA-EIVCACPTQPDKVRKILDLVQSKG 85 (144)
T ss_dssp SSCHHHH-HHHHTSSSHHHHHHHHHHHHHHHC
T ss_pred CCCHHHH-HHHhccCChHHHHHHHHHHHHHhh
Confidence 6778888 566667899999999999988765
No 29
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=25.92 E-value=1.6e+02 Score=20.86 Aligned_cols=43 Identities=14% Similarity=0.155 Sum_probs=29.7
Q ss_pred CCCHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCceEEEEE
Q 025288 210 VMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRKSKDDISCIVVK 252 (255)
Q Consensus 210 ~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~ 252 (255)
.+.-.++.+.++...+|+++++..+++..++-......+|++.
T Consensus 61 ~~~A~~iv~~m~~G~~~~~A~~~~i~~~~~~~~~~~ggvIa~d 103 (141)
T 1apy_B 61 FLPSYQAVEYMRRGEDPTIACQKVISRIQKHFPEFFGAVICAN 103 (141)
T ss_dssp GCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTCCEEEEEEE
T ss_pred HhHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 3445677778887789999999988776664333455666654
No 30
>1dgn_A Iceberg (protease inhibitor); antiparallel six-helix bundle, greek-KEY, hydrolase inhibitor; NMR {Homo sapiens} SCOP: a.77.1.3
Probab=25.83 E-value=1e+02 Score=19.74 Aligned_cols=33 Identities=12% Similarity=0.213 Sum_probs=26.0
Q ss_pred cCCCHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 025288 209 KVMTNQEAVDCIKHVKDAKSAAKHLIEHAVSRK 241 (255)
Q Consensus 209 d~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 241 (255)
+.+..+|...+-.....++..++.|++.+.++|
T Consensus 32 ~VLn~~E~e~i~~~~~t~~dkar~LiD~V~~KG 64 (89)
T 1dgn_A 32 EVISQEDMNKVRDENDTVMDKARVLIDLVTGKG 64 (89)
T ss_dssp TCSCHHHHHHHHTCCSSHHHHHHHHHHHHHHTC
T ss_pred CcccHHHHHHHHhccCchHHHHHHHHHHHHHHh
Confidence 366778877777665678999999999988765
No 31
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=21.20 E-value=99 Score=24.61 Aligned_cols=24 Identities=25% Similarity=0.195 Sum_probs=18.6
Q ss_pred EEEEEEe-CCCchHHHHHHHHHHHH
Q 025288 37 GLFAIFD-GHLGHDVANYLQTHLFD 60 (255)
Q Consensus 37 ~l~~V~D-G~Gg~~~a~~~~~~~~~ 60 (255)
.-.|||| |+||-.+++.+.+.+..
T Consensus 25 ~~IgvfDSGvGGLtv~~~i~~~lP~ 49 (274)
T 3uhf_A 25 MKIGVFDSGVGGLSVLKSLYEARLF 49 (274)
T ss_dssp CEEEEEESSSTTHHHHHHHHHTTCC
T ss_pred CeEEEEECCCChHHHHHHHHHHCCC
Confidence 3589999 89999888877666643
No 32
>2drn_C 24-residues peptide from AN A-kinase anchoring protein; AKAP, PKA, signal transduction, 4-helix bundle, helix- loop-helix; NMR {Rattus norvegicus}
Probab=21.12 E-value=82 Score=14.98 Aligned_cols=16 Identities=13% Similarity=0.310 Sum_probs=12.3
Q ss_pred CHHHHHHHHHHHHHhC
Q 025288 225 DAKSAAKHLIEHAVSR 240 (255)
Q Consensus 225 ~~~~~a~~l~~~a~~~ 240 (255)
+.+++|.++++.+.+.
T Consensus 2 sIEEaA~RIVdaVi~q 17 (26)
T 2drn_C 2 LIEEAASRIVDAVIEQ 17 (26)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHH
Confidence 5688888888887763
Done!