BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025290
(255 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 330
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ P ++C GD+HG + L L+ E P + N +FLGDY DRG + E I
Sbjct: 57 LEAPLKIC--GDIHGQYTDLLRLF---EYGGFPPEAN---YLFLGDYVDRGKQSLETICL 108
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L++ KYP + L GNH+
Sbjct: 109 LLAYKIKYP-ENFFLLRGNHE 128
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|C Chain C, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|E Chain E, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|G Chain G, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
Length = 306
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ P ++C GD+HG + +L + E P + N +FLGDY DRG + E I
Sbjct: 54 LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 105
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L++ KYP + L GNH+
Sbjct: 106 LLAYKIKYP-ENFFLLRGNHE 125
>pdb|3N5U|A Chain A, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
pdb|3N5U|B Chain B, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
Length = 300
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ P ++C GD+HG + +L + E P + N +FLGDY DRG + E I
Sbjct: 55 LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 106
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L++ KYP + L GNH+
Sbjct: 107 LLAYKIKYP-ENFFLLRGNHE 126
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7A|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7B|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
pdb|3E7B|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
Length = 299
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ P ++C GD+HG + +L + E P + N +FLGDY DRG + E I
Sbjct: 54 LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 105
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L++ KYP + L GNH+
Sbjct: 106 LLAYKIKYP-ENFFLLRGNHE 125
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin
Hybrid Bound To Okadaic Acid
Length = 293
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ P ++C GD+HG + +L + E P + N +FLGDY DRG + E I
Sbjct: 50 LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESNY---LFLGDYVDRGKQSLETICL 101
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L++ KYP + L GNH+
Sbjct: 102 LLAYKIKYP-ENFFLLRGNHE 121
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
pdb|1FJM|B Chain B, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
Length = 330
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ P ++C GD+HG + +L + E P + N +FLGDY DRG + E I
Sbjct: 55 LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 106
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L++ KYP + L GNH+
Sbjct: 107 LLAYKIKYP-ENFFLLRGNHE 126
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
pdb|4G9J|B Chain B, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
Length = 331
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ P ++C GD+HG + +L + E P + N +FLGDY DRG + E I
Sbjct: 56 LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 107
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L++ KYP + L GNH+
Sbjct: 108 LLAYKIKYP-ENFFLLRGNHE 127
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound
To Protein Phosphatase-1
pdb|1IT6|A Chain A, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|1IT6|B Chain B, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|2BCD|A Chain A, X-Ray Crystal Structure Of Protein Phosphatase-1 With The
Marine Toxin Motuporin Bound
pdb|2BDX|A Chain A, X-Ray Crystal Structure Of Dihydromicrocystin-La Bound To
Protein Phosphatase-1
Length = 323
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ P ++C GD+HG + +L + E P + N +FLGDY DRG + E I
Sbjct: 55 LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 106
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L++ KYP + L GNH+
Sbjct: 107 LLAYKIKYP-ENFFLLRGNHE 126
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8A|B Chain B, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8G|A Chain A, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
pdb|2O8G|B Chain B, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
Length = 329
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ P ++C GD+HG + +L + E P + N +FLGDY DRG + E I
Sbjct: 61 LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 112
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L++ KYP + L GNH+
Sbjct: 113 LLAYKIKYP-ENFFLLRGNHE 132
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGG|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGH|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3EGH|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3HVQ|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
pdb|3HVQ|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
Length = 329
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ P ++C GD+HG + +L + E P + N +FLGDY DRG + E I
Sbjct: 54 LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 105
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L++ KYP + L GNH+
Sbjct: 106 LLAYKIKYP-ENFFLLRGNHE 125
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ ++ GD HG L N++ E + PS+ N IF GD+ DRG + EVI
Sbjct: 209 LKETEKITVCGDTHGQFYDLLNIF---ELNGLPSETNP--YIFNGDFVDRGSFSVEVILT 263
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L YP+ H+ L GNH+
Sbjct: 264 LFGFKLLYPDHFHL-LRGNHE 283
>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
pdb|1S95|B Chain B, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
Length = 333
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ ++ GD HG L N++ E + PS+ N IF GD+ DRG + EVI
Sbjct: 65 LKETEKITVCGDTHGQFYDLLNIF---ELNGLPSETNP--YIFNGDFVDRGSFSVEVILT 119
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L YP+ H+ L GNH+
Sbjct: 120 LFGFKLLYPDHFHL-LRGNHE 139
>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H60|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H61|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H61|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H62|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H62|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H63|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H63|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H64|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H64|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H66|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H66|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H67|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H67|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H68|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H68|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H69|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
pdb|3H69|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
Length = 315
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
+ ++ GD HG L N++ E + PS+ N IF GD+ DRG + EVI
Sbjct: 56 LKETEKITVCGDTHGQFYDLLNIF---ELNGLPSETNP--YIFNGDFVDRGSFSVEVILT 110
Query: 61 LISLPTKYPNQKHVFLSGNHD 81
L YP+ H+ L GNH+
Sbjct: 111 LFGFKLLYPDHFHL-LRGNHE 130
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYL|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYM|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
pdb|2NYM|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
Length = 293
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GDVHG L L++ IG ++ + F+GDY DRG + E + L++
Sbjct: 50 PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTNYL-FMGDYVDRGYYSVETVTLLVA 101
Query: 64 LPTKYPNQKHVFLSGNHD 81
L +Y ++ L GNH+
Sbjct: 102 LKVRY-RERITILRGNHE 118
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a
Length = 304
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GDVHG L L++ IG ++ + F+GDY DRG + E + L++
Sbjct: 51 PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTNYL-FMGDYVDRGYYSVETVTLLVA 102
Query: 64 LPTKYPNQKHVFLSGNHD 81
L +Y ++ L GNH+
Sbjct: 103 LKVRY-RERITILRGNHE 119
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GDVHG L L++ IG ++ + F+GDY DRG + E + L++
Sbjct: 52 PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTNYL-FMGDYVDRGYYSVETVTLLVA 103
Query: 64 LPTKYPNQKHVFLSGNHD 81
L +Y ++ L GNH+
Sbjct: 104 LKVRY-RERITILRGNHE 120
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Okadaic Acid
pdb|2NPP|C Chain C, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|2NPP|F Chain F, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|3DW8|C Chain C, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3DW8|F Chain F, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3K7V|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-1
pdb|3K7W|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-2
Length = 309
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GDVHG L L++ IG ++ + F+GDY DRG + E + L++
Sbjct: 51 PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTNYL-FMGDYVDRGYYSVETVTLLVA 102
Query: 64 LPTKYPNQKHVFLSGNHD 81
L +Y ++ L GNH+
Sbjct: 103 LKVRY-RERITILRGNHE 119
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Tumor- Inducing Toxins
Length = 309
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GDVHG L L++ IG ++ + F+GDY DRG + E + L++
Sbjct: 51 PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTNYL-FMGDYVDRGYYSVETVTLLVA 102
Query: 64 LPTKYPNQKHVFLSGNHD 81
L +Y ++ L GNH+
Sbjct: 103 LKVRY-RERITILRGNHE 119
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer
Length = 521
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GD+HG L L++ +G S N+ + FLGDY DRG + E + +L +
Sbjct: 84 PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 135
Query: 64 LPTKYPNQKHVFLSGNHD 81
L YP + L GNH+
Sbjct: 136 LKILYP-KTLFLLRGNHE 152
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 375
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GD+HG L L++ +G S N+ + FLGDY DRG + E + +L +
Sbjct: 67 PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 118
Query: 64 LPTKYPNQKHVFLSGNHD 81
L YP + L GNH+
Sbjct: 119 LKILYP-KTLFLLRGNHE 135
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 373
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GD+HG L L++ +G S N+ + FLGDY DRG + E + +L +
Sbjct: 65 PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 116
Query: 64 LPTKYPNQKHVFLSGNHD 81
L YP + L GNH+
Sbjct: 117 LKILYP-KTLFLLRGNHE 133
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|C Chain C, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 357
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GD+HG L L++ +G S N+ + FLGDY DRG + E + +L +
Sbjct: 71 PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 122
Query: 64 LPTKYPNQKHVFLSGNHD 81
L YP + L GNH+
Sbjct: 123 LKILYP-KTLFLLRGNHE 139
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|C Chain C, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 383
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GD+HG L L++ +G S N+ + FLGDY DRG + E + +L +
Sbjct: 87 PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 138
Query: 64 LPTKYPNQKHVFLSGNHD 81
L YP + L GNH+
Sbjct: 139 LKILYP-KTLFLLRGNHE 155
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|E Chain E, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 372
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GD+HG L L++ +G S N+ + FLGDY DRG + E + +L +
Sbjct: 84 PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 135
Query: 64 LPTKYPNQKHVFLSGNHD 81
L YP + L GNH+
Sbjct: 136 LKILYP-KTLFLLRGNHE 152
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex
Length = 327
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GD+HG L L++ +G S N+ + FLGDY DRG + E + +L +
Sbjct: 64 PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 115
Query: 64 LPTKYPNQKHVFLSGNHD 81
L YP + L GNH+
Sbjct: 116 LKILYP-KTLFLLRGNHE 132
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme.
pdb|2IAE|F Chain F, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme
Length = 309
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GDVHG L L++ IG ++ + F+GDY +RG + E + L++
Sbjct: 51 PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTNYL-FMGDYVNRGYYSVETVTLLVA 102
Query: 64 LPTKYPNQKHVFLSGNHD 81
L +Y ++ L GNH+
Sbjct: 103 LKVRY-RERITILRGNHE 119
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction
Length = 309
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
P VC GDVHG L L++ IG ++ + F+GDY +RG + E + L++
Sbjct: 51 PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTNYL-FMGDYVNRGYYSVETVTLLVA 102
Query: 64 LPTKYPNQKHVFLSGNHD 81
L +Y ++ L GNH+
Sbjct: 103 LKVRY-RERITILRGNHE 119
>pdb|2QJC|A Chain A, Crystal Structure Of A Putative Diadenosine
Tetraphosphatase
Length = 262
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 6 RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISL 64
RV +GD+HG ++L++L + + G S ++ +GD ++GP++ V+ L L
Sbjct: 20 RVIIVGDIHGCRAQLEDLLRAVSFKQG-----SDTLVAVGDLVNKGPDSFGVVRLLKRL 73
>pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
pdb|3ICF|B Chain B, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
Length = 335
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 6 RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLP 65
++ GD HG + NL++ +GP +F GD+ DRG + EV L
Sbjct: 65 KISVCGDTHGQFYDVLNLFRKF-GKVGPKH----TYLFNGDFVDRGSWSCEVALLFYCLK 119
Query: 66 TKYPNQKHVFLS-GNHD 81
+PN + FL+ GNH+
Sbjct: 120 ILHPN--NFFLNRGNHE 134
>pdb|1G5B|A Chain A, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|B Chain B, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|C Chain C, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
Length = 221
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 2 SRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
S+ R + +GD+HG + L N L+T IG D ++I +GD DRG E ++ L
Sbjct: 10 SKYRNIWVVGDLHGCYTNLMN---KLDT-IG-FDNKKDLLISVGDLVDRGAENVECLE-L 63
Query: 62 ISLP 65
I+ P
Sbjct: 64 ITFP 67
>pdb|2ZBM|A Chain A, Crystal Structure Of I115m Mutant Cold-Active Protein
Tyrosine Phosphatase
Length = 336
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAI----IIFLGDYCDRGPNTREVIDF 60
++V + DVHG L L K + I SD N A ++ GD DRG EV+ F
Sbjct: 71 KKVVALSDVHGQYDVLLTLLK--KQKIIDSDGNWAFGEGHMVMTGDMFDRGHQVNEVLWF 128
Query: 61 LISLPTKYPNQKHV--FLSGNHD 81
+ L + + + L GNH+
Sbjct: 129 MYQLDQQARDAGGMVHLLMGNHE 151
>pdb|1V73|A Chain A, Crystal Structure Of Cold-Active Protein-Tyrosine
Phosphatase Of A Psychrophile Shewanella Sp
Length = 342
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAI----IIFLGDYCDRGPNTREVIDF 60
++V + DVHG L L K + I SD N A ++ GD DRG EV+ F
Sbjct: 71 KKVVALSDVHGQYDVLLTLLK--KQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWF 128
Query: 61 LISLPTKYPNQKHV--FLSGNHD 81
+ L + + + L GNH+
Sbjct: 129 MYQLDQQARDAGGMVHLLMGNHE 151
>pdb|2Z72|A Chain A, New Structure Of Cold-Active Protein Tyrosine Phosphatase
At 1.1 Angstrom
Length = 342
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAI----IIFLGDYCDRGPNTREVIDF 60
++V + DVHG L L K + I SD N A ++ GD DRG EV+ F
Sbjct: 71 KKVVALSDVHGQYDVLLTLLK--KQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWF 128
Query: 61 LISLPTKYPNQKHV--FLSGNHD 81
+ L + + + L GNH+
Sbjct: 129 MYQLDQQARDAGGMVHLLMGNHE 151
>pdb|2K7K|A Chain A, Human Acylphosphatase (Acph) Common Type
Length = 99
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 6 RVCCIGDVHGYISKLQNLWKNLET------HIGPSDFNSAIIIFLGDYCD 49
R G + G ISK++++ + LET HI ++FN+ +I DY D
Sbjct: 45 RGTVQGQLQGPISKVRHMQEWLETRGSPKSHIDKANFNNEKVILKLDYSD 94
>pdb|2VH7|A Chain A, Crystal Structure Of Human Common-Type Acylphosphatase
Length = 99
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 6 RVCCIGDVHGYISKLQNLWKNLET------HIGPSDFNSAIIIFLGDYCD 49
R G + G ISK++++ + LET HI ++FN+ +I DY D
Sbjct: 45 RGTVQGQLQGPISKVRHMQEWLETRGSPKSHIDKANFNNEKVILKLDYSD 94
>pdb|2W4C|A Chain A, Human Common-Type Acylphosphatase Variant, A99
Length = 99
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 6 RVCCIGDVHGYISKLQNLWKNLET------HIGPSDFNSAIIIFLGDYCD 49
R G + G ISK++++ + LET HI ++FN+ +I DY D
Sbjct: 45 RGTVQGQLQGPISKVRHMQEWLETRGSPKSHIDKANFNNEKVILKLDYSD 94
>pdb|2W4P|A Chain A, Human Common-Type Acylphosphatase Variant, A99g
Length = 99
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 6 RVCCIGDVHGYISKLQNLWKNLET------HIGPSDFNSAIIIFLGDYCD 49
R G + G ISK++++ + LET HI ++FN+ +I DY D
Sbjct: 45 RGTVQGQLQGPISKVRHMQEWLETRGSPKSHIDKANFNNEKVILKLDYSD 94
>pdb|1XJO|A Chain A, Structure Of Aminopeptidase
Length = 284
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 115 GWFKGDGYEKMHLQGRRWGGKITVKFN 141
G F G GY K Q ++WGG F+
Sbjct: 217 GLFTGAGYTKSAAQAQKWGGTAGQAFD 243
>pdb|1CP7|A Chain A, Aminopeptidase From Streptomyces Griseus
pdb|1QQ9|A Chain A, Streptomyces Griseus Aminopeptidase Complexed With
Methionine
pdb|1F2O|A Chain A, Crystal Structure Of The Streptomyces Griseus
Aminopeptidase Complexed With L-Leucine
pdb|1F2P|A Chain A, Crystal Structure Of The Streptomyces Griseus
Aminopeptidase Complexed With L-Phenylalanine
pdb|1TF8|A Chain A, Streptomyces Griseus Aminopeptidase Complexed With L-
Tryptophan
pdb|1TF9|A Chain A, Streptomyces Griseus Aminopeptidase Complexed With
P-Iodo-L- Phenylalanine
pdb|1TKF|A Chain A, Streptomyces Griseus Aminopeptidase Complexed With D-
Tryptophan
pdb|1TKH|A Chain A, Streptomyces Griseus Aminopeptidase Complexed With D-
Phenylalanine
pdb|1TKJ|A Chain A, Streptomyces Griseus Aminopeptidase Complexed With D-
Methionine
pdb|1XBU|A Chain A, Streptomyces Griseus Aminopeptidase Complexed With
P-Iodo-D- Phenylalanine
Length = 284
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 115 GWFKGDGYEKMHLQGRRWGGKITVKFN 141
G F G GY K Q ++WGG F+
Sbjct: 217 GLFTGAGYTKSAAQAQKWGGTAGQAFD 243
>pdb|3AJX|A Chain A, Crystal Structure Of 3-Hexulose-6-Phosphate Synthase
pdb|3AJX|B Chain B, Crystal Structure Of 3-Hexulose-6-Phosphate Synthase
pdb|3AJX|C Chain C, Crystal Structure Of 3-Hexulose-6-Phosphate Synthase
pdb|3AJX|D Chain D, Crystal Structure Of 3-Hexulose-6-Phosphate Synthase
Length = 207
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 167 GSAD------LVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKK 220
GSAD VKA H+K + D++ + ED+ K + +HAGL+ K
Sbjct: 85 GSADDSTIAGAVKAAQAHNKGVVVDLIGI--EDKATRAQEVRALGAKFVEMHAGLDEQAK 142
Query: 221 VGEQLE-LLKAKD-TRVPKVEALSGRKNVWDIPEV 253
G L LL A + RVP +++G V IP V
Sbjct: 143 PGFDLNGLLAAGEKARVPF--SVAGGVKVATIPAV 175
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,248,452
Number of Sequences: 62578
Number of extensions: 340815
Number of successful extensions: 732
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 704
Number of HSP's gapped (non-prelim): 46
length of query: 255
length of database: 14,973,337
effective HSP length: 97
effective length of query: 158
effective length of database: 8,903,271
effective search space: 1406716818
effective search space used: 1406716818
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)