Query 025290
Match_columns 255
No_of_seqs 192 out of 1651
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 04:21:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025290.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025290hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07421 MPP_Rhilphs Rhilph pho 100.0 1.1E-50 2.4E-55 362.5 19.5 251 4-254 1-251 (304)
2 PHA02239 putative protein phos 100.0 2.4E-29 5.2E-34 220.9 12.0 160 5-233 1-185 (235)
3 PRK13625 bis(5'-nucleosyl)-tet 99.9 3.9E-26 8.5E-31 201.7 12.7 143 5-219 1-146 (245)
4 cd07420 MPP_RdgC Drosophila me 99.9 9.5E-26 2.1E-30 205.8 12.8 135 5-226 51-185 (321)
5 cd07413 MPP_PA3087 Pseudomonas 99.9 1.2E-25 2.5E-30 196.0 12.1 140 8-216 2-143 (222)
6 TIGR00668 apaH bis(5'-nucleosy 99.9 2.4E-25 5.3E-30 198.9 13.3 134 5-226 1-134 (279)
7 cd07423 MPP_PrpE Bacillus subt 99.9 6.5E-25 1.4E-29 192.5 11.4 139 5-219 1-143 (234)
8 PRK11439 pphA serine/threonine 99.9 6.4E-25 1.4E-29 190.7 10.8 75 4-90 16-90 (218)
9 PRK00166 apaH diadenosine tetr 99.9 9.2E-25 2E-29 195.9 11.6 131 5-223 1-131 (275)
10 cd07422 MPP_ApaH Escherichia c 99.9 2.2E-24 4.9E-29 191.6 11.3 129 7-223 1-129 (257)
11 KOG0372 Serine/threonine speci 99.9 3.5E-24 7.7E-29 185.0 8.6 156 5-254 43-199 (303)
12 cd07418 MPP_PP7 PP7, metalloph 99.9 1.2E-23 2.6E-28 195.0 12.7 77 5-87 66-142 (377)
13 cd07417 MPP_PP5_C PP5, C-termi 99.9 1E-23 2.2E-28 192.4 11.8 77 5-87 60-136 (316)
14 smart00156 PP2Ac Protein phosp 99.9 1.7E-23 3.7E-28 187.5 12.6 154 5-252 28-181 (271)
15 cd07416 MPP_PP2B PP2B, metallo 99.9 1.5E-23 3.3E-28 190.6 11.9 155 5-253 43-197 (305)
16 PTZ00239 serine/threonine prot 99.9 1.4E-23 3.1E-28 190.4 10.8 156 5-253 43-198 (303)
17 PTZ00244 serine/threonine-prot 99.9 1.4E-23 2.9E-28 189.9 10.1 155 5-253 52-206 (294)
18 cd07415 MPP_PP2A_PP4_PP6 PP2A, 99.9 1.5E-23 3.3E-28 188.9 10.3 156 5-253 42-197 (285)
19 cd07414 MPP_PP1_PPKL PP1, PPKL 99.9 2.2E-23 4.7E-28 188.6 9.9 155 5-253 50-204 (293)
20 PTZ00480 serine/threonine-prot 99.9 4.8E-23 1E-27 187.8 11.1 155 5-253 59-213 (320)
21 cd07419 MPP_Bsu1_C Arabidopsis 99.9 9E-23 1.9E-27 186.1 12.9 83 5-88 48-132 (311)
22 KOG0373 Serine/threonine speci 99.9 1.5E-23 3.2E-28 178.9 6.3 155 5-253 46-201 (306)
23 cd00144 MPP_PPP_family phospho 99.9 9.4E-22 2E-26 169.9 11.4 135 8-224 1-135 (225)
24 PRK09968 serine/threonine-spec 99.9 2.4E-21 5.2E-26 168.4 11.9 74 4-89 14-87 (218)
25 cd07425 MPP_Shelphs Shewanella 99.9 1.9E-21 4.2E-26 167.9 10.3 80 8-87 1-84 (208)
26 KOG0371 Serine/threonine prote 99.8 1.7E-21 3.7E-26 169.5 7.3 162 4-209 59-282 (319)
27 cd07424 MPP_PrpA_PrpB PrpA and 99.8 7.8E-21 1.7E-25 163.6 11.3 73 5-89 1-73 (207)
28 KOG0374 Serine/threonine speci 99.8 9.5E-21 2.1E-25 173.4 7.5 154 5-253 59-215 (331)
29 KOG0375 Serine-threonine phosp 99.8 1.3E-19 2.7E-24 164.0 6.8 154 5-253 88-242 (517)
30 KOG0377 Protein serine/threoni 99.6 6.7E-17 1.5E-21 149.5 -1.2 77 5-87 165-241 (631)
31 PRK09453 phosphodiesterase; Pr 99.3 5.5E-12 1.2E-16 106.3 8.4 70 5-85 1-78 (182)
32 KOG0376 Serine-threonine phosp 99.2 4E-11 8.7E-16 113.0 6.7 155 4-253 213-370 (476)
33 cd07388 MPP_Tt1561 Thermus the 99.1 1.4E-10 3E-15 101.4 8.5 77 3-87 3-79 (224)
34 TIGR00040 yfcE phosphoesterase 99.0 9.1E-10 2E-14 90.5 7.2 65 5-84 1-65 (158)
35 PF00149 Metallophos: Calcineu 99.0 1.4E-09 3E-14 85.9 7.1 74 5-87 1-82 (200)
36 PF12850 Metallophos_2: Calcin 98.9 1.5E-09 3.3E-14 87.7 6.3 61 5-84 1-61 (156)
37 cd00841 MPP_YfcE Escherichia c 98.9 2.2E-09 4.8E-14 87.5 6.5 60 6-84 1-60 (155)
38 cd07385 MPP_YkuE_C Bacillus su 98.8 1.7E-08 3.7E-13 86.8 8.1 72 4-84 1-77 (223)
39 PRK11340 phosphodiesterase Yae 98.8 2E-08 4.3E-13 90.0 8.5 71 4-83 49-125 (271)
40 cd07392 MPP_PAE1087 Pyrobaculu 98.8 2E-08 4.4E-13 83.5 6.9 65 7-84 1-66 (188)
41 cd07379 MPP_239FB Homo sapiens 98.7 3E-08 6.4E-13 79.4 5.7 62 6-84 1-64 (135)
42 cd07397 MPP_DevT Myxococcus xa 98.7 5.3E-08 1.2E-12 85.8 7.6 65 5-85 1-65 (238)
43 PRK05340 UDP-2,3-diacylglucosa 98.7 3.1E-08 6.7E-13 87.1 5.6 75 5-85 1-85 (241)
44 cd07404 MPP_MS158 Microscilla 98.6 4.9E-08 1.1E-12 80.6 4.0 67 7-83 1-68 (166)
45 TIGR03729 acc_ester putative p 98.6 1.7E-07 3.7E-12 82.2 7.5 68 6-83 1-74 (239)
46 TIGR00619 sbcd exonuclease Sbc 98.4 9.4E-07 2E-11 78.5 8.0 72 5-83 1-88 (253)
47 cd07402 MPP_GpdQ Enterobacter 98.4 1.2E-06 2.7E-11 76.0 7.8 69 6-83 1-83 (240)
48 cd07396 MPP_Nbla03831 Homo sap 98.3 1.6E-06 3.4E-11 77.4 8.1 69 6-85 2-88 (267)
49 PRK11148 cyclic 3',5'-adenosin 98.3 1.4E-06 3E-11 78.0 7.6 70 4-82 14-97 (275)
50 cd07390 MPP_AQ1575 Aquifex aeo 98.3 2E-06 4.4E-11 71.5 7.5 70 7-86 1-85 (168)
51 PHA02546 47 endonuclease subun 98.3 9.5E-07 2.1E-11 81.8 6.0 71 5-83 1-89 (340)
52 TIGR01854 lipid_A_lpxH UDP-2,3 98.3 1.1E-06 2.3E-11 77.0 5.8 72 7-84 1-82 (231)
53 cd00838 MPP_superfamily metall 98.3 1.8E-06 4E-11 66.2 6.5 66 8-81 1-69 (131)
54 cd07394 MPP_Vps29 Homo sapiens 98.3 2.4E-06 5.2E-11 72.1 7.1 62 6-83 1-65 (178)
55 cd07400 MPP_YydB Bacillus subt 98.2 3E-06 6.5E-11 68.0 6.9 68 7-82 1-80 (144)
56 cd07391 MPP_PF1019 Pyrococcus 98.2 2.6E-06 5.7E-11 71.1 6.4 73 8-88 1-93 (172)
57 cd00840 MPP_Mre11_N Mre11 nucl 98.2 2.1E-06 4.6E-11 73.4 5.6 72 6-85 1-91 (223)
58 COG2129 Predicted phosphoester 98.2 6.9E-06 1.5E-10 71.3 7.8 72 3-85 2-79 (226)
59 cd07393 MPP_DR1119 Deinococcus 98.1 6.9E-06 1.5E-10 71.9 7.5 67 7-82 1-83 (232)
60 cd07403 MPP_TTHA0053 Thermus t 98.1 3.9E-06 8.5E-11 67.0 5.1 57 8-82 1-57 (129)
61 COG4186 Predicted phosphoester 98.1 1.3E-05 2.8E-10 66.0 7.9 71 4-83 3-86 (186)
62 PRK10966 exonuclease subunit S 98.1 7.4E-06 1.6E-10 77.7 7.1 71 5-83 1-87 (407)
63 TIGR00583 mre11 DNA repair pro 98.1 1E-05 2.2E-10 76.7 7.9 50 3-58 2-63 (405)
64 cd07399 MPP_YvnB Bacillus subt 98.1 8.5E-06 1.9E-10 70.5 6.9 68 6-82 2-81 (214)
65 TIGR00024 SbcD_rel_arch putati 98.1 1.2E-05 2.7E-10 70.3 7.8 73 5-84 15-103 (225)
66 cd08165 MPP_MPPE1 human MPPE1 98.1 6.7E-06 1.5E-10 67.9 5.7 46 38-83 39-89 (156)
67 cd07395 MPP_CSTP1 Homo sapiens 98.1 1.8E-05 3.8E-10 70.1 8.7 75 2-83 2-99 (262)
68 COG1408 Predicted phosphohydro 98.1 1.2E-05 2.5E-10 72.9 7.6 73 4-85 44-120 (284)
69 COG1409 Icc Predicted phosphoh 98.1 1.8E-05 3.9E-10 69.9 8.6 75 5-88 1-83 (301)
70 PRK04036 DNA polymerase II sma 98.1 1.4E-05 3.1E-10 77.7 8.4 78 4-84 243-344 (504)
71 COG0622 Predicted phosphoester 98.0 1.2E-05 2.6E-10 67.7 6.3 66 4-85 1-67 (172)
72 COG0420 SbcD DNA repair exonuc 98.0 1.3E-05 2.7E-10 75.3 6.5 72 5-84 1-89 (390)
73 cd07383 MPP_Dcr2 Saccharomyces 98.0 3.1E-05 6.8E-10 65.8 8.0 69 4-81 2-87 (199)
74 PF14582 Metallophos_3: Metall 97.9 2E-05 4.3E-10 68.8 6.1 73 4-87 5-106 (255)
75 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.9 3.6E-05 7.8E-10 68.9 7.5 72 7-83 1-86 (262)
76 cd07386 MPP_DNA_pol_II_small_a 97.9 4.7E-05 1E-09 66.9 8.0 72 8-83 2-94 (243)
77 cd07398 MPP_YbbF-LpxH Escheric 97.9 1.8E-05 3.8E-10 67.7 4.8 48 38-87 31-86 (217)
78 COG2908 Uncharacterized protei 97.8 3.4E-05 7.4E-10 67.6 4.9 70 8-86 1-83 (237)
79 cd07401 MPP_TMEM62_N Homo sapi 97.8 0.0001 2.2E-09 65.5 8.0 70 7-83 2-89 (256)
80 cd00845 MPP_UshA_N_like Escher 97.7 0.0001 2.2E-09 64.8 7.4 67 6-83 2-82 (252)
81 cd00839 MPP_PAPs purple acid p 97.7 4.4E-05 9.6E-10 68.4 5.2 75 3-84 3-82 (294)
82 cd08166 MPP_Cdc1_like_1 unchar 97.4 0.00025 5.5E-09 60.8 5.3 46 38-83 43-93 (195)
83 cd07410 MPP_CpdB_N Escherichia 97.4 0.00041 8.9E-09 62.1 6.6 66 6-83 2-95 (277)
84 cd07384 MPP_Cdc1_like Saccharo 97.3 0.00044 9.5E-09 57.9 5.8 47 38-84 46-101 (171)
85 KOG0373 Serine/threonine speci 97.2 0.00018 3.9E-09 62.4 2.2 117 71-226 157-284 (306)
86 cd07380 MPP_CWF19_N Schizosacc 97.2 0.0014 3.1E-08 53.9 7.4 68 8-81 1-68 (150)
87 KOG0372 Serine/threonine speci 97.2 8.8E-05 1.9E-09 65.2 -0.3 104 70-210 153-266 (303)
88 PLN02533 probable purple acid 97.1 0.00097 2.1E-08 63.7 6.3 70 4-83 139-211 (427)
89 COG1768 Predicted phosphohydro 97.0 0.0011 2.3E-08 56.1 4.9 72 5-85 1-88 (230)
90 COG1407 Predicted ICC-like pho 97.0 0.0026 5.7E-08 55.9 7.6 75 4-88 19-115 (235)
91 cd07408 MPP_SA0022_N Staphyloc 97.0 0.0022 4.8E-08 56.9 7.1 66 6-83 2-82 (257)
92 cd08163 MPP_Cdc1 Saccharomyces 96.9 0.002 4.3E-08 57.5 5.8 45 38-82 46-96 (257)
93 cd07412 MPP_YhcR_N Bacillus su 96.8 0.0035 7.6E-08 56.7 6.6 67 6-83 2-88 (288)
94 cd08164 MPP_Ted1 Saccharomyces 96.7 0.0058 1.3E-07 52.4 7.1 67 12-83 24-111 (193)
95 cd07378 MPP_ACP5 Homo sapiens 96.7 0.0061 1.3E-07 54.1 7.4 69 6-83 2-83 (277)
96 cd07406 MPP_CG11883_N Drosophi 96.6 0.0063 1.4E-07 54.1 7.1 67 6-83 2-83 (257)
97 TIGR00282 metallophosphoestera 96.6 0.0083 1.8E-07 53.9 7.7 68 5-83 1-71 (266)
98 cd07411 MPP_SoxB_N Thermus the 96.5 0.0084 1.8E-07 53.4 7.3 65 6-83 2-95 (264)
99 PF06874 FBPase_2: Firmicute f 96.4 0.0025 5.5E-08 62.8 3.6 46 38-89 185-230 (640)
100 KOG3662 Cell division control 96.4 0.0091 2E-07 56.5 6.9 46 38-83 94-144 (410)
101 cd00842 MPP_ASMase acid sphing 96.2 0.0096 2.1E-07 53.6 5.8 73 10-86 43-125 (296)
102 PRK09419 bifunctional 2',3'-cy 96.2 0.013 2.9E-07 62.6 7.5 66 5-82 661-735 (1163)
103 cd07409 MPP_CD73_N CD73 ecto-5 96.2 0.02 4.4E-07 51.5 7.8 67 6-83 2-94 (281)
104 cd07382 MPP_DR1281 Deinococcus 96.1 0.024 5.2E-07 50.6 7.7 68 6-84 1-71 (255)
105 cd08162 MPP_PhoA_N Synechococc 95.7 0.036 7.9E-07 50.8 7.1 70 6-82 2-90 (313)
106 KOG1432 Predicted DNA repair e 95.4 0.048 1E-06 50.4 6.7 43 38-82 101-146 (379)
107 PRK09420 cpdB bifunctional 2', 95.0 0.068 1.5E-06 53.8 7.2 69 4-83 25-122 (649)
108 cd07407 MPP_YHR202W_N Saccharo 94.9 0.059 1.3E-06 48.8 6.0 73 4-83 5-97 (282)
109 cd07405 MPP_UshA_N Escherichia 94.9 0.084 1.8E-06 47.6 7.0 71 6-83 2-87 (285)
110 TIGR01390 CycNucDiestase 2',3' 94.9 0.071 1.5E-06 53.5 7.0 68 5-83 3-99 (626)
111 COG3855 Fbp Uncharacterized pr 94.8 0.023 4.9E-07 54.4 3.1 46 38-89 191-236 (648)
112 TIGR01530 nadN NAD pyrophospha 94.5 0.13 2.8E-06 50.9 7.7 67 6-83 2-94 (550)
113 PRK11907 bifunctional 2',3'-cy 94.3 0.13 2.8E-06 53.1 7.2 68 5-83 116-213 (814)
114 PRK09419 bifunctional 2',3'-cy 94.2 0.1 2.3E-06 55.9 6.7 67 5-82 42-138 (1163)
115 COG0737 UshA 5'-nucleotidase/2 94.2 0.11 2.4E-06 50.7 6.4 69 4-83 26-115 (517)
116 KOG2310 DNA repair exonuclease 93.6 0.18 4E-06 49.2 6.5 52 4-61 13-76 (646)
117 PF04042 DNA_pol_E_B: DNA poly 93.5 0.1 2.2E-06 44.5 4.3 73 7-85 1-93 (209)
118 KOG2863 RNA lariat debranching 93.5 0.24 5.2E-06 46.2 6.8 75 5-83 1-88 (456)
119 PRK09418 bifunctional 2',3'-cy 93.3 0.24 5.2E-06 51.0 7.2 68 4-82 39-141 (780)
120 PRK09558 ushA bifunctional UDP 93.0 0.2 4.4E-06 49.4 6.1 73 4-83 34-121 (551)
121 cd07387 MPP_PolD2_C PolD2 (DNA 92.8 0.44 9.5E-06 42.6 7.4 75 7-84 2-108 (257)
122 COG1311 HYS2 Archaeal DNA poly 92.6 0.4 8.6E-06 46.3 7.2 79 5-84 226-322 (481)
123 KOG2476 Uncharacterized conser 91.1 0.96 2.1E-05 43.5 7.8 71 4-80 5-75 (528)
124 KOG0371 Serine/threonine prote 90.3 0.23 4.9E-06 44.5 2.7 75 156-253 141-215 (319)
125 PTZ00422 glideosome-associated 90.0 0.64 1.4E-05 44.1 5.7 71 5-82 27-108 (394)
126 KOG3947 Phosphoesterases [Gene 89.9 0.31 6.6E-06 44.0 3.2 68 4-85 61-128 (305)
127 KOG1378 Purple acid phosphatas 89.8 0.5 1.1E-05 45.4 4.8 73 4-85 147-223 (452)
128 COG1692 Calcineurin-like phosp 88.6 2.1 4.6E-05 38.1 7.4 70 5-85 1-73 (266)
129 KOG2679 Purple (tartrate-resis 87.7 0.95 2.1E-05 41.0 4.8 70 4-83 43-126 (336)
130 KOG3325 Membrane coat complex 87.5 1.3 2.9E-05 36.5 5.1 60 5-83 1-66 (183)
131 PTZ00235 DNA polymerase epsilo 87.4 2.3 5.1E-05 38.7 7.2 80 4-84 27-123 (291)
132 KOG3770 Acid sphingomyelinase 81.2 3 6.5E-05 41.3 5.4 73 18-94 195-274 (577)
133 PF13277 YmdB: YmdB-like prote 71.8 13 0.00028 33.2 6.4 64 8-82 1-67 (253)
134 PF02875 Mur_ligase_C: Mur lig 60.9 24 0.00053 25.6 5.2 67 7-79 14-80 (91)
135 PF06874 FBPase_2: Firmicute f 51.2 13 0.00028 37.4 2.8 22 6-27 34-55 (640)
136 PTZ00239 serine/threonine prot 49.7 6.7 0.00014 35.9 0.6 73 94-203 183-259 (303)
137 COG3855 Fbp Uncharacterized pr 39.2 14 0.00031 35.9 1.0 19 8-26 41-59 (648)
138 PF13258 DUF4049: Domain of un 33.6 50 0.0011 29.5 3.4 47 39-85 86-142 (318)
139 cd07415 MPP_PP2A_PP4_PP6 PP2A, 28.6 18 0.00039 32.8 -0.1 73 94-203 182-257 (285)
140 KOG4513 Phosphoglycerate mutas 26.3 1.8E+02 0.0038 27.9 5.9 53 8-64 129-188 (531)
141 COG3207 DIT1 Pyoverdine/dityro 26.2 86 0.0019 28.5 3.7 40 2-47 103-156 (330)
142 cd07417 MPP_PP5_C PP5, C-termi 24.1 22 0.00048 32.7 -0.4 73 94-203 201-276 (316)
143 PF00185 OTCace: Aspartate/orn 23.1 1.2E+02 0.0025 24.8 3.8 51 4-64 2-53 (158)
144 PF04723 GRDA: Glycine reducta 22.8 3.6E+02 0.0078 22.0 6.3 74 3-85 4-81 (150)
145 PF09949 DUF2183: Uncharacteri 20.9 3.3E+02 0.0071 20.6 5.6 21 38-61 64-84 (100)
No 1
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=100.00 E-value=1.1e-50 Score=362.53 Aligned_cols=251 Identities=69% Similarity=1.307 Sum_probs=231.8
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
++++++||||||+++.|+++|+.+...........+.+||+||+|||||+|.+|+++++++...+|..++++|+||||.+
T Consensus 1 ~~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~ 80 (304)
T cd07421 1 PRVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFA 80 (304)
T ss_pred CceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHH
Confidence 35899999999999999999998865422111234689999999999999999999999998877644689999999999
Q ss_pred hhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290 84 FAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG 163 (255)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~ 163 (255)
++.+++..+.++++..|.+.|++|..++|.+.|+++.|||-||.++|+|++.+.++||.+.+.+|.+++|++.+|+.||+
T Consensus 81 ~l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYG 160 (304)
T cd07421 81 FAAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYG 160 (304)
T ss_pred HHhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcC
Confidence 99999987788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccC
Q 025290 164 VAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSG 243 (255)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~ 243 (255)
+.+....+.++++++|++||++||++++.+++|+.+.++...|+.+|||||+.|+.++++|.+.|..+++..|+.+.+.+
T Consensus 161 v~~~~~~l~~avP~~H~~fl~~l~~~~~~~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~~~~l~~ 240 (304)
T cd07421 161 VPHGSSDLIKAVPEEHKKFLRNLVWVHEEDDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPKIAPLSG 240 (304)
T ss_pred CCcchHHHHHhCCHHHHHHHHhCCceEEeCcccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccccccccc
Confidence 99888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCccc
Q 025290 244 RKNVWDIPEVI 254 (255)
Q Consensus 244 ~~~~w~~~~~~ 254 (255)
|+.+|++|...
T Consensus 241 R~~f~~~~~~~ 251 (304)
T cd07421 241 RKNVWNIPQEL 251 (304)
T ss_pred chhhhcCcccc
Confidence 99999998754
No 2
>PHA02239 putative protein phosphatase
Probab=99.96 E-value=2.4e-29 Score=220.95 Aligned_cols=160 Identities=27% Similarity=0.372 Sum_probs=121.5
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
||+++||||||++..|+++++.+..... +.+.+|++||+|||||.|.++++.++++.... .++++|+||||.++
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~----~~d~li~lGD~iDrG~~s~~v~~~l~~~~~~~--~~~~~l~GNHE~~~ 74 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERK----PEETIVFLGDYVDRGKRSKDVVNYIFDLMSND--DNVVTLLGNHDDEF 74 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCC----CCCEEEEecCcCCCCCChHHHHHHHHHHhhcC--CCeEEEECCcHHHH
Confidence 6899999999999999999999865421 24899999999999999999999998875432 26899999999999
Q ss_pred hhhhcCCCCCCCCCcccccccccccchhh-cccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290 85 AAFVGVLPEPGGGLGFKEGWKQYEQNEER-EGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG 163 (255)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~ 163 (255)
++++.. +.. .... ..|++ +|| .+|+.||+
T Consensus 75 l~~~~~---~~~-------------~~~~~~~wl~-------------~GG---------------------~~Tl~Syg 104 (235)
T PHA02239 75 YNIMEN---VDR-------------LSIYDIEWLS-------------RYC---------------------IETLNSYG 104 (235)
T ss_pred HHHHhC---chh-------------cccchHHHHH-------------cCC---------------------HHHHHHcC
Confidence 998753 100 0000 13443 444 77777776
Q ss_pred CCcChH------------------HH----HhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCCh
Q 025290 164 VAHGSA------------------DL----VKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKV 221 (255)
Q Consensus 164 ~~~~~~------------------~~----~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l 221 (255)
...... .+ .....+++..|+++||++++.+ +++|||||++|..++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~-------------~~ifVHAGi~p~~~~ 171 (235)
T PHA02239 105 VSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKED-------------KYIFSHSGGVSWKPV 171 (235)
T ss_pred CCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEEC-------------CEEEEeCCCCCCCCh
Confidence 543210 00 0123478889999999999999 899999999999999
Q ss_pred HHHHH--HhhhccC
Q 025290 222 GEQLE--LLKAKDT 233 (255)
Q Consensus 222 ~~q~~--~~~~r~~ 233 (255)
.+|.. ++|+|++
T Consensus 172 ~~q~~~~llWiR~f 185 (235)
T PHA02239 172 EEQTIDQLIWSRDF 185 (235)
T ss_pred hhCCHhHeEEeccc
Confidence 99988 6899983
No 3
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.94 E-value=3.9e-26 Score=201.70 Aligned_cols=143 Identities=22% Similarity=0.332 Sum_probs=106.1
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCC---CCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPS---DFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHD 81 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~---~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE 81 (255)
||++||||||||+++|+++|+++++..... .+..+++||+||+|||||+|.+|+++++++... .++++|+||||
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~~~---~~~~~l~GNHE 77 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELVEK---KAAYYVPGNHC 77 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHhhC---CCEEEEeCccH
Confidence 689999999999999999999988752111 013589999999999999999999999988533 26999999999
Q ss_pred cchhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhh
Q 025290 82 LGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFES 161 (255)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~s 161 (255)
.++++++... ..|. .+|+ .+|+.+
T Consensus 78 ~~~l~~~~~~----------------------~~~~-------------~~gg---------------------~~tl~~ 101 (245)
T PRK13625 78 NKLYRFFLGR----------------------NVTI-------------AHGL---------------------ETTVAE 101 (245)
T ss_pred HHHHHHHhCC----------------------Cccc-------------cchh---------------------HhHHHH
Confidence 9999876531 0122 2333 667777
Q ss_pred cCCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCC
Q 025290 162 YGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGK 219 (255)
Q Consensus 162 y~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~ 219 (255)
|..... .....+.+.+.+|++++|+++.... ++++|||||+.|..
T Consensus 102 ~~~~~~--~~~~~~~~~~~~~~~~lPl~~~~~~-----------~~~~~vHAG~~~~~ 146 (245)
T PRK13625 102 YEALPS--HKQNMIKEKFITLYEQAPLYHILDE-----------GRLVVAHAGIRQDY 146 (245)
T ss_pred HhccCh--hhHHHHHHHHHHHHHhCCceEEEeC-----------CCEEEEECCCChHh
Confidence 643211 1122355678999999999986631 17999999998873
No 4
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=99.93 E-value=9.5e-26 Score=205.75 Aligned_cols=135 Identities=20% Similarity=0.286 Sum_probs=106.1
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
.+++|||||||++..|.++++..+... +.++++|+||+||||+.|.+|+.++..++..+|+ +++++|||||.+.
T Consensus 51 ~~~~vvGDiHG~~~dL~~il~~~g~~~-----~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~-~v~llRGNHE~~~ 124 (321)
T cd07420 51 KQVTICGDLHGKLDDLFLIFYKNGLPS-----PENPYVFNGDFVDRGKRSIEILIILFAFFLVYPN-EVHLNRGNHEDHI 124 (321)
T ss_pred CCeEEEEeCCCCHHHHHHHHHHcCCCC-----ccceEEEeccccCCCCCcHHHHHHHHHHhhcCCC-cEEEecCchhhhh
Confidence 589999999999999999999876532 2478999999999999999999999999999985 8999999999988
Q ss_pred hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290 85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~ 164 (255)
++...+ - ..++...|+.
T Consensus 125 ~~~~yG-------------------------------------------f--------------------~~e~~~~y~~ 141 (321)
T cd07420 125 MNLRYG-------------------------------------------F--------------------TKEVMSKYKL 141 (321)
T ss_pred hhhhcC-------------------------------------------h--------------------HHHHHHHhCc
Confidence 764321 0 0344444542
Q ss_pred CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHH
Q 025290 165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLE 226 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~ 226 (255)
. ...+.....++++.||++..++. ++++|||||.|..++++-..
T Consensus 142 ~------~~~l~~~~~~~F~~LPlaaii~~------------~i~cvHGGi~~~~~l~~i~~ 185 (321)
T cd07420 142 H------GKKILRLLEDVFSWLPLATIIDN------------KILVVHGGISDSTDLDLLDK 185 (321)
T ss_pred c------HHHHHHHHHHHHHhCCceEEEcC------------CEEEEeCCCCCccCHHHHHh
Confidence 1 12345678999999999998872 79999999987666654333
No 5
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.93 E-value=1.2e-25 Score=195.99 Aligned_cols=140 Identities=22% Similarity=0.359 Sum_probs=101.2
Q ss_pred EEEccCCCCHHHHHHHHHHhhhccCCC--CCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccchh
Q 025290 8 CCIGDVHGYISKLQNLWKNLETHIGPS--DFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFA 85 (255)
Q Consensus 8 ~vigDIHG~~~~l~~lL~~~~~~~~~~--~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~ 85 (255)
+||||||||+++|+++|++++++.... ..+.+++||+||+|||||+|.+|+++++++... .++++|+||||.+++
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~---~~~~~l~GNHE~~ll 78 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA---GHALAVMGNHEFNAI 78 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC---CCEEEEEccCcHHHH
Confidence 799999999999999999998753211 012579999999999999999999999998654 269999999999999
Q ss_pred hhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCCC
Q 025290 86 AFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVA 165 (255)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~~ 165 (255)
+++... | ....|++.. |+.. .....++++++...
T Consensus 79 ~~~~~~--~-----------------~~~~w~~~~------------~~~~---------------~~~~~~~l~~~~~~ 112 (222)
T cd07413 79 AWHTKD--P-----------------SGGEWLRAH------------SKKN---------------LRQHQAFLEQFREH 112 (222)
T ss_pred HhhhCC--c-----------------ccchhhhcC------------CCcc---------------cccHHHHHHHHhcc
Confidence 876431 1 112343211 1100 00013455554311
Q ss_pred cChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeecc
Q 025290 166 HGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLE 216 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~ 216 (255)
.+..+++++||++||++++.+ +++|||||++
T Consensus 113 -------~~~~~~~~~~l~~lP~~~~~~-------------~~~~VHAg~~ 143 (222)
T cd07413 113 -------SEEHKDWLEWFKTLPLFLDLG-------------GVRVVHACWD 143 (222)
T ss_pred -------chhHHHHHHHHhcCCcEEEEC-------------CEEEEECCcC
Confidence 234578999999999999988 8999999986
No 6
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.93 E-value=2.4e-25 Score=198.85 Aligned_cols=134 Identities=26% Similarity=0.388 Sum_probs=104.7
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
|++|||||||||+++|+++|+++++... .|.++|+||+|||||+|.+|+++++++.. ++++|+||||.++
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~-----~D~l~~lGDlVdRGP~slevL~~l~~l~~-----~~~~VlGNHD~~l 70 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPG-----QDTLWLTGDLVARGPGSLEVLRYVKSLGD-----AVRLVLGNHDLHL 70 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCC-----CCEEEEeCCccCCCCCHHHHHHHHHhcCC-----CeEEEEChhHHHH
Confidence 5799999999999999999999987642 58999999999999999999999999864 4789999999998
Q ss_pred hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290 85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~ 164 (255)
+..+...... . ...++.
T Consensus 71 L~~~~g~~~~--------------------------------------~---------------------~~d~l~---- 87 (279)
T TIGR00668 71 LAVFAGISRN--------------------------------------K---------------------PKDRLD---- 87 (279)
T ss_pred HHHhcCCCcc--------------------------------------C---------------------chHHHH----
Confidence 8865421000 0 011211
Q ss_pred CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHH
Q 025290 165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLE 226 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~ 226 (255)
+.+.....+++++||+++|+.++.+. .++++|||||.|..++.+...
T Consensus 88 ----~~l~a~~~~ell~wLr~lPl~i~~~~-----------~~~~lVHAGi~P~w~l~~a~~ 134 (279)
T TIGR00668 88 ----PLLEAPDADELLNWLRRQPLLQHDEE-----------KKLVMAHAGITPQWDLQTAKE 134 (279)
T ss_pred ----HHHHccCHHHHHHHHHcCCcEEEeCC-----------CCEEEEecCCCCCCcHHHHHH
Confidence 12345667899999999999986541 169999999999999865544
No 7
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.92 E-value=6.5e-25 Score=192.47 Aligned_cols=139 Identities=24% Similarity=0.333 Sum_probs=102.0
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCC----CCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCc
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGP----SDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNH 80 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~----~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNH 80 (255)
|||+||||||||+.+|+++|+++++.... ...+.+++||+||+|||||.|.+|+++++++..+ .++++|+|||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~---~~~~~v~GNH 77 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA---GAALCVPGNH 77 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC---CcEEEEECCc
Confidence 68999999999999999999999775321 0112589999999999999999999999998643 2589999999
Q ss_pred ccchhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhh
Q 025290 81 DLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFE 160 (255)
Q Consensus 81 E~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~ 160 (255)
|.++++++.... .+. ..|+ ..|+.
T Consensus 78 E~~l~~~~~~~~----------------------~~~-------------~~~~---------------------~~t~~ 101 (234)
T cd07423 78 DNKLYRKLQGRN----------------------VKI-------------THGL---------------------EETVA 101 (234)
T ss_pred HHHHHHHhcCCC----------------------ccc-------------cCcc---------------------cchHH
Confidence 999998765310 000 0111 33444
Q ss_pred hcCCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCC
Q 025290 161 SYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGK 219 (255)
Q Consensus 161 sy~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~ 219 (255)
+|.. ....+.+++.+||++||++++.+. ++++|||||+.+..
T Consensus 102 ~~~~------~~~~~~~~~~~~l~~lP~~~~~~~-----------~~~~~vHag~~~~~ 143 (234)
T cd07423 102 QLEA------ESEEFKEEVIEFYESLPSHLVLDE-----------GKLVVAHAGIKEEM 143 (234)
T ss_pred HHhh------ccHHHHHHHHHHHHhCCcEEEeCC-----------CcEEEEeCCCChHh
Confidence 4431 123445678999999999887641 17999999987653
No 8
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.92 E-value=6.4e-25 Score=190.73 Aligned_cols=75 Identities=23% Similarity=0.344 Sum_probs=66.2
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
.+|++||||||||+.+|+++|+.+++.. ..|++|++||+|||||+|.+|++++++. ++++|+||||.+
T Consensus 16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~-----~~D~li~lGDlvDrGp~s~~vl~~l~~~-------~~~~v~GNHE~~ 83 (218)
T PRK11439 16 WRHIWLVGDIHGCFEQLMRKLRHCRFDP-----WRDLLISVGDLIDRGPQSLRCLQLLEEH-------WVRAVRGNHEQM 83 (218)
T ss_pred CCeEEEEEcccCCHHHHHHHHHhcCCCc-----ccCEEEEcCcccCCCcCHHHHHHHHHcC-------CceEeeCchHHH
Confidence 4699999999999999999999997753 2589999999999999999999999763 468999999999
Q ss_pred hhhhhcC
Q 025290 84 FAAFVGV 90 (255)
Q Consensus 84 ~~~~~~~ 90 (255)
+++++..
T Consensus 84 ~l~~~~~ 90 (218)
T PRK11439 84 ALDALAS 90 (218)
T ss_pred HHHHHHC
Confidence 9987653
No 9
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.92 E-value=9.2e-25 Score=195.90 Aligned_cols=131 Identities=26% Similarity=0.406 Sum_probs=100.1
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
|+++||||||||+.+|+++|+++++... .|.+|++||+|||||+|.+|+++++++.. ++++|+||||.++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~-----~D~li~lGDlVdrGp~s~~vl~~l~~l~~-----~~~~VlGNHD~~l 70 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPA-----KDTLWLVGDLVNRGPDSLEVLRFVKSLGD-----SAVTVLGNHDLHL 70 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCC-----CCEEEEeCCccCCCcCHHHHHHHHHhcCC-----CeEEEecChhHHH
Confidence 6899999999999999999999876432 58999999999999999999999999842 5899999999998
Q ss_pred hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290 85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~ 164 (255)
+........+ . ...++.++-
T Consensus 71 l~~~~g~~~~--------------------------------------~---------------------~~~~l~~~l- 90 (275)
T PRK00166 71 LAVAAGIKRN--------------------------------------K---------------------KKDTLDPIL- 90 (275)
T ss_pred HHhhcCCccc--------------------------------------c---------------------chhHHHHHH-
Confidence 8764321000 0 022222221
Q ss_pred CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHH
Q 025290 165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGE 223 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~ 223 (255)
.....+++++||+++|++++... .+++|||||+.|..++.+
T Consensus 91 -------~~~~~~~~~~~L~~lPl~~~~~~-----------~~~l~vHAGi~p~~~~~~ 131 (275)
T PRK00166 91 -------EAPDRDELLDWLRHQPLLHVDEE-----------LGLVMVHAGIPPQWDLAT 131 (275)
T ss_pred -------ccccHHHHHHHHHCCCcEEEECC-----------CCEEEEccCCCCCCCHHH
Confidence 12334679999999999998521 189999999999987644
No 10
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.91 E-value=2.2e-24 Score=191.62 Aligned_cols=129 Identities=25% Similarity=0.398 Sum_probs=100.0
Q ss_pred EEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccchhh
Q 025290 7 VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAA 86 (255)
Q Consensus 7 i~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~ 86 (255)
++||||||||+.+|+++|+++++... .|++||+||+|||||+|.+|+++++++.. ++++|+||||.+++.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~-----~D~Li~lGDlVdRGp~s~evl~~l~~l~~-----~v~~VlGNHD~~ll~ 70 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPA-----KDRLWLVGDLVNRGPDSLETLRFVKSLGD-----SAKTVLGNHDLHLLA 70 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCC-----CCEEEEecCcCCCCcCHHHHHHHHHhcCC-----CeEEEcCCchHHHHH
Confidence 48999999999999999999987532 58999999999999999999999999873 589999999999887
Q ss_pred hhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCCCc
Q 025290 87 FVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAH 166 (255)
Q Consensus 87 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~~~ 166 (255)
...... ..++ ..++.++
T Consensus 71 ~~~g~~--------------------------------------~~~~---------------------~~t~~~~---- 87 (257)
T cd07422 71 VAAGIK--------------------------------------KPKK---------------------KDTLDDI---- 87 (257)
T ss_pred HhcCcc--------------------------------------cccc---------------------HhHHHHH----
Confidence 543200 0000 1222221
Q ss_pred ChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHH
Q 025290 167 GSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGE 223 (255)
Q Consensus 167 ~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~ 223 (255)
+.....+++++||+++|++++.+. .+++||||||.|..++.+
T Consensus 88 ----l~~~~~~~~~~wLr~lPl~~~~~~-----------~~~l~vHAGi~p~w~~~~ 129 (257)
T cd07422 88 ----LNAPDRDELLDWLRHQPLLHRDPE-----------LGILMVHAGIPPQWSIEQ 129 (257)
T ss_pred ----HhccchHHHHHHHHhCCCEEEECC-----------ccEEEEccCCCCCCCHHH
Confidence 223445789999999999998762 169999999999987644
No 11
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=99.90 E-value=3.5e-24 Score=185.03 Aligned_cols=156 Identities=26% Similarity=0.419 Sum_probs=118.3
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
.++.|+|||||++..|..+++.-+.. +....+|+||+||||-+|++++-+|..++.+||+ ++++||||||...
T Consensus 43 tPvtvcGDIHGQf~Dllelf~igG~~------~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~-ritLiRGNHEsRq 115 (303)
T KOG0372|consen 43 TPVTVCGDIHGQFYDLLELFRIGGDV------PETNYLFLGDYVDRGYYSVETFLLLLALKVRYPD-RITLIRGNHESRQ 115 (303)
T ss_pred CCcEEeecccchHHHHHHHHHhCCCC------CCCceEeecchhccccchHHHHHHHHHHhhcCcc-eeEEeeccchhhh
Confidence 46899999999999999999875432 3578999999999999999999999999999997 9999999999887
Q ss_pred hh-hhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290 85 AA-FVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG 163 (255)
Q Consensus 85 ~~-~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~ 163 (255)
+. .++++ .+++..||
T Consensus 116 itqvYGFY----------------------------------------------------------------~EclrKYG 131 (303)
T KOG0372|consen 116 ITQVYGFY----------------------------------------------------------------DECLRKYG 131 (303)
T ss_pred hhhhhhHH----------------------------------------------------------------HHHHHHcC
Confidence 74 34442 55566666
Q ss_pred CCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccC
Q 025290 164 VAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSG 243 (255)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~ 243 (255)
.. .+.+-.-+.+.-||+...++. ++++||||+.|+..--+|...+ .|.-..| +....
T Consensus 132 ~~--------~vWr~c~eiFdyL~l~aiid~------------kifCVHGGlSP~i~~lDqIr~l-DR~~Eip--h~g~m 188 (303)
T KOG0372|consen 132 SA--------NVWRYCTEIFDYLSLAAIIDG------------KIFCVHGGLSPSIQTLDQIRVL-DRKQEVP--HDGAM 188 (303)
T ss_pred Ch--------HHHHHHHHHHHhhhHhheecC------------cEEEEcCCCCcchhhHHHHHHh-hccccCC--CCCcc
Confidence 32 222234466777788776662 8999999999999877777754 2222222 23334
Q ss_pred CccccCCCccc
Q 025290 244 RKNVWDIPEVI 254 (255)
Q Consensus 244 ~~~~w~~~~~~ 254 (255)
-+.+||||++.
T Consensus 189 ~DllWSDPee~ 199 (303)
T KOG0372|consen 189 CDLLWSDPEEG 199 (303)
T ss_pred hheeccCcccC
Confidence 48899999974
No 12
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=99.90 E-value=1.2e-23 Score=194.99 Aligned_cols=77 Identities=30% Similarity=0.468 Sum_probs=68.5
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
.+++|||||||++.+|.++++.++.... ++.+||+||+||||+.|.+++.++..++..+|+ +++++|||||...
T Consensus 66 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~-----~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~-~v~lLRGNHE~~~ 139 (377)
T cd07418 66 CEVVVVGDVHGQLHDVLFLLEDAGFPDQ-----NRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPD-RVYLLRGNHESKF 139 (377)
T ss_pred CCEEEEEecCCCHHHHHHHHHHhCCCCC-----CceEEEeccccCCCCChHHHHHHHHHHhhccCC-eEEEEeeeccccc
Confidence 5799999999999999999998876432 467999999999999999999999999988885 8999999999987
Q ss_pred hhh
Q 025290 85 AAF 87 (255)
Q Consensus 85 ~~~ 87 (255)
++.
T Consensus 140 i~~ 142 (377)
T cd07418 140 CTS 142 (377)
T ss_pred chh
Confidence 653
No 13
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=99.90 E-value=1e-23 Score=192.44 Aligned_cols=77 Identities=29% Similarity=0.426 Sum_probs=68.8
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
.+++|||||||++.+|.++|+..++... +++++|+||+||||+.|.+|+.++..++..+|+ +++++|||||...
T Consensus 60 ~~~~VvGDIHG~~~dL~~ll~~~g~~~~-----~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~-~v~lLRGNHE~~~ 133 (316)
T cd07417 60 EKITVCGDTHGQFYDLLNIFELNGLPSE-----TNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPN-HFHLNRGNHETDN 133 (316)
T ss_pred ceeEEeecccCCHHHHHHHHHhcCCCCc-----cCeEEEEeeEecCCCChHHHHHHHHHhhhccCC-ceEEEeeccchHH
Confidence 6799999999999999999998876432 478999999999999999999999999988885 7999999999977
Q ss_pred hhh
Q 025290 85 AAF 87 (255)
Q Consensus 85 ~~~ 87 (255)
++.
T Consensus 134 ~~~ 136 (316)
T cd07417 134 MNK 136 (316)
T ss_pred HHH
Confidence 654
No 14
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=99.90 E-value=1.7e-23 Score=187.50 Aligned_cols=154 Identities=25% Similarity=0.387 Sum_probs=112.8
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
++++|||||||++.+|.++++..+.. +.++++|+||+||||+.+.+++.+++.++..+|+ +++++|||||...
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~~------~~~~~vfLGD~VDrG~~s~e~l~~l~~lk~~~p~-~v~llrGNHE~~~ 100 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGPP------PDTNYVFLGDYVDRGPFSIEVILLLFALKILYPN-RVVLLRGNHESRS 100 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCCC------CCceEEEeCCccCCCCChHHHHHHHHHHHhcCCC-CEEEEeccccHHH
Confidence 68999999999999999999988753 3589999999999999999999999999988885 8999999999987
Q ss_pred hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290 85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~ 164 (255)
++...... .+....|+
T Consensus 101 ~~~~~gf~---------------------------------------------------------------~e~~~~~~- 116 (271)
T smart00156 101 MNEIYGFY---------------------------------------------------------------DECKRKYG- 116 (271)
T ss_pred HHHhccch---------------------------------------------------------------hhhhhhcC-
Confidence 75322100 11122222
Q ss_pred CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290 165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR 244 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~ 244 (255)
..+.....++++.||++..++. ++++||||+.|...--++...+ .|.... +....-.
T Consensus 117 --------~~l~~~~~~~f~~LPl~aii~~------------~~~~vHgGi~~~~~~l~~i~~i-~r~~~~--~~~~~~~ 173 (271)
T smart00156 117 --------EEIYEKFQEAFSWLPLAALIDN------------KILCMHGGLSPDLTTLDDIRKL-KRPQEP--PDEGLLI 173 (271)
T ss_pred --------HHHHHHHHHHHhhChhheEEcC------------eEEEEecCCCCccCCHHHHhcc-cCCCCC--Cchhhhh
Confidence 1334568899999999988762 6999999999886533333322 111111 1222345
Q ss_pred ccccCCCc
Q 025290 245 KNVWDIPE 252 (255)
Q Consensus 245 ~~~w~~~~ 252 (255)
+.+||||.
T Consensus 174 dllWsDP~ 181 (271)
T smart00156 174 DLLWSDPD 181 (271)
T ss_pred heeecCCC
Confidence 78999995
No 15
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=99.90 E-value=1.5e-23 Score=190.61 Aligned_cols=155 Identities=23% Similarity=0.316 Sum_probs=111.9
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
.+++|||||||++.+|.++++..+.. +.++++||||+||||+.|.+++.++..++..+|+ +++++|||||...
T Consensus 43 ~~i~ViGDIHG~~~dL~~l~~~~g~~------~~~~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~-~v~lLRGNHE~~~ 115 (305)
T cd07416 43 APVTVCGDIHGQFYDLLKLFEVGGSP------ANTRYLFLGDYVDRGYFSIECVLYLWALKILYPK-TLFLLRGNHECRH 115 (305)
T ss_pred CCEEEEEeCCCCHHHHHHHHHhcCCC------CCceEEEECCccCCCCChHHHHHHHHHHHhhcCC-CEEEEeCCCcHHH
Confidence 57999999999999999999877543 3589999999999999999999999999999996 8999999999987
Q ss_pred hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290 85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~ 164 (255)
++...... .++...|+
T Consensus 116 l~~~~gf~---------------------------------------------------------------~e~~~~y~- 131 (305)
T cd07416 116 LTEYFTFK---------------------------------------------------------------QECKIKYS- 131 (305)
T ss_pred HHHhhCch---------------------------------------------------------------hHHHHhcc-
Confidence 65422100 11111221
Q ss_pred CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290 165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR 244 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~ 244 (255)
..+.....++++.||++..+++ ++++||||+.|...--++...+ .|-...|.. ..-.
T Consensus 132 --------~~l~~~~~~~f~~LPlaaii~~------------~i~~vHGGi~p~~~~l~~i~~i-~r~~~~~~~--~~~~ 188 (305)
T cd07416 132 --------ERVYDACMEAFDCLPLAALMNQ------------QFLCVHGGLSPELKTLDDIRKL-DRFREPPAF--GPMC 188 (305)
T ss_pred --------HHHHHHHHHHHhhccceeEEcC------------CEEEEcCCCCcccccHHHhccc-CCCCCCCCC--Ccce
Confidence 1223568899999999987762 8999999999886543444332 111111111 1234
Q ss_pred ccccCCCcc
Q 025290 245 KNVWDIPEV 253 (255)
Q Consensus 245 ~~~w~~~~~ 253 (255)
+.+||||..
T Consensus 189 dllWsDP~~ 197 (305)
T cd07416 189 DLLWSDPLE 197 (305)
T ss_pred eeeecCccc
Confidence 789999964
No 16
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=99.90 E-value=1.4e-23 Score=190.36 Aligned_cols=156 Identities=26% Similarity=0.429 Sum_probs=114.4
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
.+++|||||||++.+|.++++..+.. +.++++|+||+||||+.+.+++.++..++..+|+ +++++|||||...
T Consensus 43 ~~i~vvGDIHG~~~~L~~l~~~~~~~------~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~-~v~llrGNHE~~~ 115 (303)
T PTZ00239 43 APVNVCGDIHGQFYDLQALFKEGGDI------PNANYIFIGDFVDRGYNSVETMEYLLCLKVKYPG-NITLLRGNHESRQ 115 (303)
T ss_pred CCEEEEEeCCCCHHHHHHHHHhcCCC------CCceEEEeeeEcCCCCCHHHHHHHHHHhhhcCCC-cEEEEecccchHH
Confidence 46999999999999999999887643 3579999999999999999999999999998885 8999999999877
Q ss_pred hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290 85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~ 164 (255)
+..... | ..++..+|+.
T Consensus 116 ~~~~~g-------------------------f--------------------------------------~~e~~~ky~~ 132 (303)
T PTZ00239 116 CTQVYG-------------------------F--------------------------------------YEEILRKYGN 132 (303)
T ss_pred HhhhcC-------------------------h--------------------------------------HHHHHHHhcC
Confidence 653221 0 0334444542
Q ss_pred CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290 165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR 244 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~ 244 (255)
. .+.....++++.||++..+++ ++++|||||.|...--++...+ .|....|..... .
T Consensus 133 ~--------~~~~~~~~~f~~LPlaaii~~------------~i~cvHgGi~p~~~~l~~i~~i-~r~~~~~~~~~~--~ 189 (303)
T PTZ00239 133 S--------NPWRLFMDVFDCLPLAALIEG------------QILCVHGGLSPDMRTIDQIRTI-DRKIEIPHEGPF--C 189 (303)
T ss_pred h--------hHHHHHHHHHHhCchheEEcC------------eEEEEcCccCcccccHhhhccc-cCCCCCCCCCCc--e
Confidence 1 123456889999999987662 7999999999886544444432 232222322222 3
Q ss_pred ccccCCCcc
Q 025290 245 KNVWDIPEV 253 (255)
Q Consensus 245 ~~~w~~~~~ 253 (255)
+.+||||..
T Consensus 190 dllWsDP~~ 198 (303)
T PTZ00239 190 DLMWSDPEE 198 (303)
T ss_pred eeEecCccc
Confidence 799999963
No 17
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=99.90 E-value=1.4e-23 Score=189.87 Aligned_cols=155 Identities=23% Similarity=0.314 Sum_probs=113.6
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
..++|||||||++.+|.++++.+++.. .++++|+||+||||+.|.+++.++..++..+|. +++++|||||...
T Consensus 52 ~p~~ViGDIHG~~~~L~~l~~~~~~~~------~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~-~v~llrGNHE~~~ 124 (294)
T PTZ00244 52 PPVRVCGDTHGQYYDLLRIFEKCGFPP------YSNYLFLGDYVDRGKHSVETITLQFCYKIVYPE-NFFLLRGNHECAS 124 (294)
T ss_pred CCceeeccCCCCHHHHHHHHHHcCCCC------cccEEEeeeEecCCCCHHHHHHHHHHHhhccCC-eEEEEecccchHh
Confidence 358999999999999999999887643 468999999999999999999999998888885 8999999999876
Q ss_pred hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290 85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~ 164 (255)
++.... | ..++...|+
T Consensus 125 ~~~~~g-------------------------f--------------------------------------~~e~~~~y~- 140 (294)
T PTZ00244 125 INKMYG-------------------------F--------------------------------------FDDVKRRYN- 140 (294)
T ss_pred HhhccC-------------------------h--------------------------------------HHHHHHHhh-
Confidence 653211 0 022223333
Q ss_pred CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290 165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR 244 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~ 244 (255)
..+...+.++++.||++..+++ ++++||||+.|....-++...+. |-...+ ....-.
T Consensus 141 --------~~l~~~~~~~f~~lPlaaii~~------------~il~vHgGi~p~~~~l~~i~~i~-rp~~~~--~~~~~~ 197 (294)
T PTZ00244 141 --------IKLFKAFTDVFNTMPVCCVISE------------KIICMHGGLSPDLTSLASVNEIE-RPCDVP--DRGILC 197 (294)
T ss_pred --------HHHHHHHHHHHHhCchheEecC------------eeEEEcCCCCchhhHHHHhhhhc-cccCCC--ccchhh
Confidence 2334678999999999987762 79999999999876444444321 211122 222235
Q ss_pred ccccCCCcc
Q 025290 245 KNVWDIPEV 253 (255)
Q Consensus 245 ~~~w~~~~~ 253 (255)
+.+||||..
T Consensus 198 dllWsDP~~ 206 (294)
T PTZ00244 198 DLLWADPED 206 (294)
T ss_pred eeeecCccc
Confidence 789999974
No 18
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=99.90 E-value=1.5e-23 Score=188.93 Aligned_cols=156 Identities=24% Similarity=0.364 Sum_probs=114.8
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
.+++|||||||++.+|.++++..++. +.++++|+||+||||+.+.+++.++..++..+|+ +++++|||||...
T Consensus 42 ~~i~vvGDIHG~~~dL~~ll~~~~~~------~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~-~v~llrGNHE~~~ 114 (285)
T cd07415 42 SPVTVCGDIHGQFYDLLELFRVGGDP------PDTNYLFLGDYVDRGYYSVETFLLLLALKVRYPD-RITLLRGNHESRQ 114 (285)
T ss_pred CCEEEEEeCCCCHHHHHHHHHHcCCC------CCCeEEEEeEECCCCcCHHHHHHHHHHHhhcCCC-cEEEEecccchHh
Confidence 46999999999999999999887653 2478999999999999999999999999988885 8999999999876
Q ss_pred hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290 85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~ 164 (255)
+..... - ..++..+|+.
T Consensus 115 ~~~~yg-------------------------------------------f--------------------~~e~~~~y~~ 131 (285)
T cd07415 115 ITQVYG-------------------------------------------F--------------------YDECLRKYGN 131 (285)
T ss_pred hhhhcc-------------------------------------------h--------------------hHHHHHhcCc
Confidence 653211 0 0334444442
Q ss_pred CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290 165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR 244 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~ 244 (255)
..+.....++++.||++..++. ++++|||||.|...-.+|...+ .|-...+... .-.
T Consensus 132 --------~~l~~~~~~~f~~lPlaaii~~------------~i~cvHgGi~p~~~~~~~i~~i-~r~~~~~~~~--~~~ 188 (285)
T cd07415 132 --------ANVWKYCTDLFDYLPLAALIDN------------QIFCVHGGLSPSIDTLDQIRAI-DRFQEVPHEG--PMC 188 (285)
T ss_pred --------hHHHHHHHHHHHHhHHHhEeCC------------eEEEEcCCCCCCcccHHHhhcc-cCCCCCCCCC--Ccc
Confidence 1233567889999999977662 7999999999987755555533 1211222211 234
Q ss_pred ccccCCCcc
Q 025290 245 KNVWDIPEV 253 (255)
Q Consensus 245 ~~~w~~~~~ 253 (255)
+.+||||..
T Consensus 189 dllWsDP~~ 197 (285)
T cd07415 189 DLLWSDPDD 197 (285)
T ss_pred ceEecCCCc
Confidence 689999974
No 19
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=99.89 E-value=2.2e-23 Score=188.59 Aligned_cols=155 Identities=25% Similarity=0.334 Sum_probs=113.5
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
.+++|||||||++.+|.++++..++.. .++++|+||+||||+.+.+++.++..++..+|+ +++++|||||...
T Consensus 50 ~~i~viGDIHG~~~~L~~l~~~~~~~~------~~~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~-~i~llrGNHE~~~ 122 (293)
T cd07414 50 APLKICGDIHGQYYDLLRLFEYGGFPP------ESNYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECAS 122 (293)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCCCC------cceEEEEeeEecCCCCcHHHHHHHHHhhhhCCC-cEEEEecccchhh
Confidence 479999999999999999999887643 478999999999999999999999999999996 8999999999987
Q ss_pred hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290 85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~ 164 (255)
++...... .++...|+
T Consensus 123 ~~~~~gf~---------------------------------------------------------------~e~~~~y~- 138 (293)
T cd07414 123 INRIYGFY---------------------------------------------------------------DECKRRYN- 138 (293)
T ss_pred Hhhhcchh---------------------------------------------------------------hHHHHhhh-
Confidence 76432100 11111222
Q ss_pred CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290 165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR 244 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~ 244 (255)
..+......+++.||++..++. ++++||||+.|...--++...+ .|....|.. ..-.
T Consensus 139 --------~~l~~~~~~~f~~lPlaa~i~~------------~i~cvHgGi~p~~~~l~~i~~i-~r~~~~~~~--~~~~ 195 (293)
T cd07414 139 --------IKLWKTFTDCFNCLPVAAIIDE------------KIFCMHGGLSPDLQSMEQIRRI-MRPTDVPDQ--GLLC 195 (293)
T ss_pred --------HHHHHHHHHHHHHhHHHHhhCC------------cEEEEccCCCcccCcHHHHhcc-cCCCCCCch--hhHh
Confidence 1233567889999999987662 7899999999987654554433 121122221 2234
Q ss_pred ccccCCCcc
Q 025290 245 KNVWDIPEV 253 (255)
Q Consensus 245 ~~~w~~~~~ 253 (255)
+.+||||..
T Consensus 196 dllWsDP~~ 204 (293)
T cd07414 196 DLLWSDPDK 204 (293)
T ss_pred hhhccCccc
Confidence 789999974
No 20
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=99.89 E-value=4.8e-23 Score=187.84 Aligned_cols=155 Identities=25% Similarity=0.346 Sum_probs=113.2
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
.+++|||||||++.+|.++++..++.. .+.++|+||+||||+.+.+++.++..++..+|+ +++++|||||...
T Consensus 59 ~~i~vvGDIHG~~~dL~~l~~~~g~~~------~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~-~v~llRGNHE~~~ 131 (320)
T PTZ00480 59 APLKICGDVHGQYFDLLRLFEYGGYPP------ESNYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECAS 131 (320)
T ss_pred CCeEEEeecccCHHHHHHHHHhcCCCC------cceEEEeceecCCCCCcHHHHHHHHHhcccCCC-ceEEEecccchhh
Confidence 479999999999999999998876643 478999999999999999999999999999985 8999999999877
Q ss_pred hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290 85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~ 164 (255)
++..... . .+....|+
T Consensus 132 ~~~~ygF-------------------------~--------------------------------------~e~~~~y~- 147 (320)
T PTZ00480 132 INRIYGF-------------------------Y--------------------------------------DECKRRYT- 147 (320)
T ss_pred hhhhcch-------------------------H--------------------------------------HHHHhhcC-
Confidence 6532210 0 11111222
Q ss_pred CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290 165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR 244 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~ 244 (255)
..+.......+..||++..+++ ++++|||||.|....-++...+ .|....|.. ..-.
T Consensus 148 --------~~l~~~~~~~F~~LPlaAiI~~------------~i~cvHGGI~p~~~~l~~i~~i-~rp~~~~~~--~~~~ 204 (320)
T PTZ00480 148 --------IKLWKTFTDCFNCLPVAALIDE------------KILCMHGGLSPELSNLEQIRRI-MRPTDVPDT--GLLC 204 (320)
T ss_pred --------HHHHHHHHHHHHhccHhheecC------------cEEEEcCCcCcccCCHHHHhcc-cCCCCCCcc--chhh
Confidence 1223457788899999977663 8999999999987654554432 122222222 2234
Q ss_pred ccccCCCcc
Q 025290 245 KNVWDIPEV 253 (255)
Q Consensus 245 ~~~w~~~~~ 253 (255)
+.+||||..
T Consensus 205 dllWSDP~~ 213 (320)
T PTZ00480 205 DLLWSDPDK 213 (320)
T ss_pred heeecCccc
Confidence 789999974
No 21
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=99.89 E-value=9e-23 Score=186.11 Aligned_cols=83 Identities=33% Similarity=0.572 Sum_probs=69.4
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccC--CCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIG--PSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL 82 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~--~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~ 82 (255)
.+++||||||||+.+|.++++.++.... .++..+.++||+||+|||||.|.+|+.++..++..+|+ ++++||||||.
T Consensus 48 ~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~-~v~lLRGNHE~ 126 (311)
T cd07419 48 APIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPN-QIHLIRGNHED 126 (311)
T ss_pred CCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChHHHHHHHHHhhhcCCC-cEEEeccccch
Confidence 4689999999999999999998865321 01111357999999999999999999999999988885 89999999999
Q ss_pred chhhhh
Q 025290 83 GFAAFV 88 (255)
Q Consensus 83 ~~~~~~ 88 (255)
+.++..
T Consensus 127 ~~l~~~ 132 (311)
T cd07419 127 RDINAL 132 (311)
T ss_pred HHHHHH
Confidence 888753
No 22
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=99.89 E-value=1.5e-23 Score=178.89 Aligned_cols=155 Identities=28% Similarity=0.462 Sum_probs=118.8
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
.++.|+|||||++..|.++++.-+..+ ....||+||+||||-.|.++..+++-|+.+||+ ++.++|||||...
T Consensus 46 tPVTvCGDIHGQFyDL~eLFrtgG~vP------~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~-~ITLlRGNHEsRq 118 (306)
T KOG0373|consen 46 TPVTVCGDIHGQFYDLLELFRTGGQVP------DTNYIFMGDFVDRGYYSLETFTLLLLLKARYPA-KITLLRGNHESRQ 118 (306)
T ss_pred CCeeEeeccchhHHHHHHHHHhcCCCC------CcceEEeccccccccccHHHHHHHHHHhhcCCc-eeEEeeccchhhh
Confidence 468999999999999999998866543 478999999999999999999999999999996 8999999999887
Q ss_pred h-hhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290 85 A-AFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG 163 (255)
Q Consensus 85 ~-~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~ 163 (255)
+ +.+++++++......+.+||
T Consensus 119 itqVYGFydECq~KYGnan~wk---------------------------------------------------------- 140 (306)
T KOG0373|consen 119 ITQVYGFYDECQNKYGNANVWK---------------------------------------------------------- 140 (306)
T ss_pred hhhhhhhHHHHHhhcCCchHHH----------------------------------------------------------
Confidence 7 45665433322222222221
Q ss_pred CCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccC
Q 025290 164 VAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSG 243 (255)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~ 243 (255)
---+.+.-|++...++. ++++||||+.|+...-+|...+ .|.-..|...+.+
T Consensus 141 --------------ycckVFD~LtlaAiID~------------~vLCVHGGLSPdirtlDqir~i-~R~qEiPh~G~fc- 192 (306)
T KOG0373|consen 141 --------------YCCKVFDFLTLAAIIDE------------KVLCVHGGLSPDIRTLDQIRLI-ERNQEIPHEGPFC- 192 (306)
T ss_pred --------------HHHHHHhhhhHHHHhcC------------cEEEEcCCCCccceeHHHHHhH-HhhccCCCCCCcc-
Confidence 22344555566655552 8999999999999888888865 5666666666665
Q ss_pred CccccCCCcc
Q 025290 244 RKNVWDIPEV 253 (255)
Q Consensus 244 ~~~~w~~~~~ 253 (255)
+.+||||+.
T Consensus 193 -DlmWSDPed 201 (306)
T KOG0373|consen 193 -DLMWSDPED 201 (306)
T ss_pred -ceeccChhh
Confidence 889999985
No 23
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=99.87 E-value=9.4e-22 Score=169.95 Aligned_cols=135 Identities=30% Similarity=0.539 Sum_probs=100.3
Q ss_pred EEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccchhhh
Q 025290 8 CCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAF 87 (255)
Q Consensus 8 ~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~~ 87 (255)
+|||||||++.+|.++|+.++.. +.+++|++||+|||||.+.++++++.++... | .++++|+||||.+++..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~------~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~-~~~~~l~GNHe~~~~~~ 72 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFP------PNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-P-DNVILLRGNHEDMLLNF 72 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCC------CCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-C-CcEEEEccCchhhhhhh
Confidence 58999999999999999998763 2589999999999999999999999998765 4 37999999999998876
Q ss_pred hcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCCCcC
Q 025290 88 VGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHG 167 (255)
Q Consensus 88 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~~~~ 167 (255)
....... ..|. ++ ..+...
T Consensus 73 ~~~~~~~-------------------~~~~---------------~~---------------------~~~~~~------ 91 (225)
T cd00144 73 LYGFYDE-------------------DEWI---------------GG---------------------TLRLLK------ 91 (225)
T ss_pred hcCCcch-------------------hhcc---------------ch---------------------hHHHHH------
Confidence 5431100 0010 00 111111
Q ss_pred hHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHH
Q 025290 168 SADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQ 224 (255)
Q Consensus 168 ~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q 224 (255)
.....+.+.+..|+.+||+.+.++. ++++|||||+.|..+...+
T Consensus 92 --~~~~~~~~~~~~~~~~lp~~~~~~~-----------~~~~~vHag~~~~~~~~~~ 135 (225)
T cd00144 92 --KLGEDLWEEFNDVFFYLPLAALIET-----------KKVLCVHGGLSPGLPLEEQ 135 (225)
T ss_pred --hhCHHHHHHHHHHHHhCcHheEeCC-----------CeEEEEeCCCCCccchHHh
Confidence 1123445678899999999988871 2799999999999876644
No 24
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.86 E-value=2.4e-21 Score=168.44 Aligned_cols=74 Identities=27% Similarity=0.409 Sum_probs=64.8
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
..|++||||||||+.+|+++|+.+.+.. ..|++|++||+|||||.|.++++++.+. ++++|+||||.+
T Consensus 14 ~~ri~visDiHg~~~~l~~~l~~~~~~~-----~~d~l~~lGD~vdrG~~~~~~l~~l~~~-------~~~~v~GNHE~~ 81 (218)
T PRK09968 14 YRHIWVVGDIHGEYQLLQSRLHQLSFCP-----ETDLLISVGDNIDRGPESLNVLRLLNQP-------WFISVKGNHEAM 81 (218)
T ss_pred CCeEEEEEeccCCHHHHHHHHHhcCCCC-----CCCEEEECCCCcCCCcCHHHHHHHHhhC-------CcEEEECchHHH
Confidence 3599999999999999999999986543 2589999999999999999999999752 478999999999
Q ss_pred hhhhhc
Q 025290 84 FAAFVG 89 (255)
Q Consensus 84 ~~~~~~ 89 (255)
+++++.
T Consensus 82 ~~~~~~ 87 (218)
T PRK09968 82 ALDAFE 87 (218)
T ss_pred HHHHHh
Confidence 998764
No 25
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.86 E-value=1.9e-21 Score=167.94 Aligned_cols=80 Identities=30% Similarity=0.417 Sum_probs=64.8
Q ss_pred EEEccCCCCHHHHHHHHHHhhhccCCCC--CCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCC--CCcEEEECCCcccc
Q 025290 8 CCIGDVHGYISKLQNLWKNLETHIGPSD--FNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYP--NQKHVFLSGNHDLG 83 (255)
Q Consensus 8 ~vigDIHG~~~~l~~lL~~~~~~~~~~~--~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p--~~~v~~i~GNHE~~ 83 (255)
+|||||||++.+|+++|+.+++...... ...+.+|++||+|||||.+.+|+++++++..+++ +.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999998875321111 1368999999999999999999999999864321 24799999999999
Q ss_pred hhhh
Q 025290 84 FAAF 87 (255)
Q Consensus 84 ~~~~ 87 (255)
++..
T Consensus 81 ~l~~ 84 (208)
T cd07425 81 NLCG 84 (208)
T ss_pred HHcc
Confidence 8863
No 26
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=99.85 E-value=1.7e-21 Score=169.47 Aligned_cols=162 Identities=28% Similarity=0.521 Sum_probs=132.7
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
...+.|+|||||+++.|.+++ +++... +....+|+||+||||++|.+++.++..++.+||+ +|.++|||||..
T Consensus 59 ~~pvtvcGDvHGqf~dl~ELf-kiGG~~-----pdtnylfmGDyvdrGy~SvetVS~lva~Kvry~~-rvtilrGNHEsr 131 (319)
T KOG0371|consen 59 NCPVTVCGDVHGQFHDLIELF-KIGGLA-----PDTNYLFMGDYVDRGYYSVETVSLLVALKVRYPD-RVTILRGNHESR 131 (319)
T ss_pred ccceEEecCcchhHHHHHHHH-HccCCC-----CCcceeeeeeecccccchHHHHHHHHHhhccccc-eeEEecCchHHH
Confidence 346899999999999999999 455443 3578999999999999999999999999999996 999999999986
Q ss_pred hhh-hhcCCCC---------------------------------------------------------CCCCCccccccc
Q 025290 84 FAA-FVGVLPE---------------------------------------------------------PGGGLGFKEGWK 105 (255)
Q Consensus 84 ~~~-~~~~~~~---------------------------------------------------------~~~~~~~~~~w~ 105 (255)
.+. .++++++ |.++.+++.+|
T Consensus 132 qitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLw- 210 (319)
T KOG0371|consen 132 QITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLW- 210 (319)
T ss_pred HHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheec-
Confidence 653 3332111 77888888888
Q ss_pred ccccchhhcccc---cCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCCCcChHHHHhcCCHHHHHH
Q 025290 106 QYEQNEEREGWF---KGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKF 182 (255)
Q Consensus 106 ~~~~~~~~~~w~---~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~~~~~~~~~~~~~~~~~~~ 182 (255)
+++.++-.|- ++.|| .+|.+++.+||.++++++. .++|...
T Consensus 211 --sdpddr~gwg~sprgag~--------tfg~di~~~fn~~n~lsli--------------------------sRahqlv 254 (319)
T KOG0371|consen 211 --SDPDDRCGWGISPRGAGY--------TFGQDISEQFNHKNGLSLI--------------------------SRAHQLV 254 (319)
T ss_pred --cCcccCCCCCCCCCCCCc--------ccchhhHHHhhccCCchHh--------------------------HHHHHHH
Confidence 7788888885 66666 6888888889888876533 5688999
Q ss_pred HhcCcceEEecCeeeecCCCc-cccCeE
Q 025290 183 LADMLWVHEEDEVCVETNDGI-KHCKLI 209 (255)
Q Consensus 183 l~~LP~~~~~~~~~~~~~~~~-~~~~~~ 209 (255)
++...++.+-+.++++|++|+ ++|+..
T Consensus 255 m~g~nW~~~~~~vtiFSapnycYrcgn~ 282 (319)
T KOG0371|consen 255 MEGYNWYHLWNVVTIFSAPNYCYRCGNQ 282 (319)
T ss_pred hcccceeeecceeEEccCCchhhccccH
Confidence 999999999999999999987 666654
No 27
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.84 E-value=7.8e-21 Score=163.58 Aligned_cols=73 Identities=26% Similarity=0.373 Sum_probs=63.3
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
+||++||||||++.+|+++++.+++.. ..|.+|++||++|+||.+.++++++.+. ++++|+||||.++
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~-----~~d~~~~~GD~v~~g~~~~~~~~~l~~~-------~~~~v~GNhe~~~ 68 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDP-----ARDRLISVGDLIDRGPESLACLELLLEP-------WFHAVRGNHEQMA 68 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCC-----CCCEEEEeCCcccCCCCHHHHHHHHhcC-------CEEEeECCChHHH
Confidence 589999999999999999999886532 2489999999999999999999999761 5899999999998
Q ss_pred hhhhc
Q 025290 85 AAFVG 89 (255)
Q Consensus 85 ~~~~~ 89 (255)
+..+.
T Consensus 69 ~~~~~ 73 (207)
T cd07424 69 IDALR 73 (207)
T ss_pred HhHhh
Confidence 87653
No 28
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=99.82 E-value=9.5e-21 Score=173.41 Aligned_cols=154 Identities=28% Similarity=0.412 Sum_probs=114.8
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhh-hccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLE-THIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~-~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
-+|.|+|||||++..|.+++...+ +. +...++|||||||||+.|++++-++..++.+||+ +++.+|||||.+
T Consensus 59 aPV~i~GDiHGq~~DLlrlf~~~g~~p------p~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~-~~~lLRGNHE~~ 131 (331)
T KOG0374|consen 59 APVKIVGDIHGQFGDLLRLFDLLGSFP------PDQNYVFLGDYVDRGKQSLETICLLFALKIKYPE-NVFLLRGNHECA 131 (331)
T ss_pred CCEEEEccCcCCHHHHHHHHHhcCCCC------CcccEEEecccccCCccceEEeehhhhhhhhCCc-eEEEeccccccc
Confidence 479999999999999999999987 54 3589999999999999999999999999999996 999999999998
Q ss_pred hhhh-hcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhc
Q 025290 84 FAAF-VGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESY 162 (255)
Q Consensus 84 ~~~~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy 162 (255)
.++. ++++++ .. |+|++
T Consensus 132 ~in~~yGFydE--------------------------------~~--rr~~~---------------------------- 149 (331)
T KOG0374|consen 132 SINRIYGFYDE--------------------------------CK--RRYGE---------------------------- 149 (331)
T ss_pred cccceeeeHHH--------------------------------HH--Hhcch----------------------------
Confidence 7763 222100 00 22221
Q ss_pred CCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHH-hhhccCCCCchhhc
Q 025290 163 GVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLEL-LKAKDTRVPKVEAL 241 (255)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~-~~~r~~~~~~~~~~ 241 (255)
..+......-+..||++..+.. +++++|||+.|...-.+|... .+. +..|...
T Consensus 150 ----------~~~w~~F~~~f~~mp~~a~i~~------------kI~CmhGGlsp~l~~~~~i~~i~rp--~~~~~~g-- 203 (331)
T KOG0374|consen 150 ----------IKLWKAFNDAFNCLPLAALIDG------------KILCMHGGLSPHLKSLDQIRAIPRP--TDSPDKG-- 203 (331)
T ss_pred ----------HHHHHHHHHHHhhCchhheecc------------eEEEecCCCChhhcChHHHhhccCC--cCCCccc--
Confidence 0112356778999999887763 999999999999775555553 222 2333322
Q ss_pred cCCccccCCCcc
Q 025290 242 SGRKNVWDIPEV 253 (255)
Q Consensus 242 ~~~~~~w~~~~~ 253 (255)
.--+.+|+||+.
T Consensus 204 ll~DLlWsdp~~ 215 (331)
T KOG0374|consen 204 LLCDLLWSDPDD 215 (331)
T ss_pred eeeeeeecCCCC
Confidence 334778999974
No 29
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=99.79 E-value=1.3e-19 Score=164.02 Aligned_cols=154 Identities=23% Similarity=0.325 Sum_probs=115.4
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
..|.|+|||||++..|.+|++.= ..+ ...+.+||||+||||..|++|+-+|..|+..||+ ...++|||||...
T Consensus 88 APiTVCGDIHGQf~DLmKLFEVG-G~P-----A~t~YLFLGDYVDRGyFSiECvlYLwsLKi~yp~-tl~lLRGNHECrH 160 (517)
T KOG0375|consen 88 APITVCGDIHGQFFDLMKLFEVG-GSP-----ANTRYLFLGDYVDRGYFSIECVLYLWSLKINYPK-TLFLLRGNHECRH 160 (517)
T ss_pred CCeeEecccchHHHHHHHHHHcc-CCc-----ccceeEeeccccccceeeeehHHHHHHHhcCCCC-eEEEecCCcchhh
Confidence 47899999999999999999863 322 3689999999999999999999999999999996 8899999999987
Q ss_pred hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290 85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV 164 (255)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~ 164 (255)
+.-+... .+++...|.
T Consensus 161 LT~YFTF---------------------------------------------------------------KqEc~iKYs- 176 (517)
T KOG0375|consen 161 LTEYFTF---------------------------------------------------------------KQECKIKYS- 176 (517)
T ss_pred hHhHhhH---------------------------------------------------------------HHHHhHhcc-
Confidence 7533210 034444444
Q ss_pred CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCC-ChHHHHHHhhhccCCCCchhhccC
Q 025290 165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGK-KVGEQLELLKAKDTRVPKVEALSG 243 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~-~l~~q~~~~~~r~~~~~~~~~~~~ 243 (255)
.++..+-.+-+..||++...+ +.+++||||+.|.. ++++-..+-+.+++ |..-. .
T Consensus 177 --------e~vYdaCmesFd~LPLAAlmN------------qQflCVHGGlSPEi~tl~DIr~l~RF~Ep--Pa~Gp--m 232 (517)
T KOG0375|consen 177 --------ERVYDACMESFDCLPLAALMN------------QQFLCVHGGLSPEIHTLDDIRKLDRFKEP--PAFGP--M 232 (517)
T ss_pred --------HHHHHHHHHHhccchHHHHhc------------CceEEecCCCCcccccHHHHHhhhhccCC--CccCc--c
Confidence 344556777788899986655 28999999999996 46665555444433 22222 3
Q ss_pred CccccCCCcc
Q 025290 244 RKNVWDIPEV 253 (255)
Q Consensus 244 ~~~~w~~~~~ 253 (255)
=+.+|+||-+
T Consensus 233 CDLLWsDPlE 242 (517)
T KOG0375|consen 233 CDLLWSDPLE 242 (517)
T ss_pred hhhhccChhh
Confidence 4789999965
No 30
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=99.60 E-value=6.7e-17 Score=149.50 Aligned_cols=77 Identities=30% Similarity=0.447 Sum_probs=67.0
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
..+.|+||+||.++.|.-+|-+-+.... ....||.||+||||..|+|||-.+..+...+|+ .+++-|||||..+
T Consensus 165 ~qVTiCGDLHGklDDL~~I~yKNGlPS~-----~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~-~~~LNRGNHED~m 238 (631)
T KOG0377|consen 165 QQVTICGDLHGKLDDLLVILYKNGLPSS-----SNPYVFNGDFVDRGKRSIEVLMILFALYLVYPN-AVHLNRGNHEDHM 238 (631)
T ss_pred cceEEeccccccccceEEEEecCCCCCC-----CCCeeecCchhhccccchhhHHHHHHHHhcCch-hhhccCCchHHHH
Confidence 4689999999999999888766655433 467999999999999999999999999888995 7899999999998
Q ss_pred hhh
Q 025290 85 AAF 87 (255)
Q Consensus 85 ~~~ 87 (255)
++.
T Consensus 239 mNl 241 (631)
T KOG0377|consen 239 MNL 241 (631)
T ss_pred HHH
Confidence 875
No 31
>PRK09453 phosphodiesterase; Provisional
Probab=99.32 E-value=5.5e-12 Score=106.29 Aligned_cols=70 Identities=20% Similarity=0.342 Sum_probs=58.0
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC--------hHHHHHHHHhCCCCCCCCcEEEE
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN--------TREVIDFLISLPTKYPNQKHVFL 76 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~--------s~~vl~~l~~l~~~~p~~~v~~i 76 (255)
||+++|||+||+..+++++++.+.... .|.+|++||++++|+. +.++++.+.++.. ++++|
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~------~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~v~~V 69 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSG------ADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYAD-----KIIAV 69 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcC------CCEEEEcccccccCcCCCCccccCHHHHHHHHHhcCC-----ceEEE
Confidence 689999999999999999998885543 4899999999998873 5678888877642 58999
Q ss_pred CCCcccchh
Q 025290 77 SGNHDLGFA 85 (255)
Q Consensus 77 ~GNHE~~~~ 85 (255)
+||||..+.
T Consensus 70 ~GNhD~~~~ 78 (182)
T PRK09453 70 RGNCDSEVD 78 (182)
T ss_pred ccCCcchhh
Confidence 999997653
No 32
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.17 E-value=4e-11 Score=112.97 Aligned_cols=155 Identities=23% Similarity=0.294 Sum_probs=113.2
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
..++.++||+||++..+.++++..+.... ....+|.||++|||..+.++...+...+..+|+ ++++.|||||.-
T Consensus 213 d~~~sv~gd~hGqfydl~nif~l~g~Ps~-----t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn-~~fl~rgn~Es~ 286 (476)
T KOG0376|consen 213 DVKISVCGDTHGQFYDLLNIFELNGLPSE-----TNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPN-NFFLLRGNHESD 286 (476)
T ss_pred CceEEecCCccccccchhhhHhhcCCCCC-----cccccccCceeeecccceeeeeeehhhcccCCc-ceeeccCCccch
Confidence 46899999999999999999998876543 567999999999999999999999999999996 899999999976
Q ss_pred hh-hhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhc
Q 025290 84 FA-AFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESY 162 (255)
Q Consensus 84 ~~-~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy 162 (255)
.+ ..+++..++.. ..|.
T Consensus 287 ~m~~iy~f~~e~~~-----------------------------------------------------------kyte--- 304 (476)
T KOG0376|consen 287 NMNKIYGFEGEVKA-----------------------------------------------------------KYTE--- 304 (476)
T ss_pred HHHHHhCCCcchhh-----------------------------------------------------------hhHH---
Confidence 55 44554222210 1111
Q ss_pred CCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccC--CCChHHHHHHhhhccCCCCchhh
Q 025290 163 GVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLER--GKKVGEQLELLKAKDTRVPKVEA 240 (255)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p--~~~l~~q~~~~~~r~~~~~~~~~ 240 (255)
+...-.-+-+..||+...++. +++.+|||+.. +.++.+...+.+. --+++.
T Consensus 305 -----------~~~~~f~~~f~~LPl~~~i~~------------~~~~~hgglf~~~~v~l~d~r~i~r~----~~~~~~ 357 (476)
T KOG0376|consen 305 -----------EMFNLFSEVFIWLPLAHLINN------------KVLVMHGGLFSPDGVTLEDFRNIDRF----EQPPEE 357 (476)
T ss_pred -----------HHHHhhhhhhccccchhhhcC------------ceEEEecCcCCCCCccHHHHHhhhhc----cCCccc
Confidence 111111256778898877763 89999999973 3466666665322 223466
Q ss_pred ccCCccccCCCcc
Q 025290 241 LSGRKNVWDIPEV 253 (255)
Q Consensus 241 ~~~~~~~w~~~~~ 253 (255)
......+|++|+.
T Consensus 358 ~~~~~~lws~pq~ 370 (476)
T KOG0376|consen 358 GLMCELLWSDPQP 370 (476)
T ss_pred ccccccccCCCcc
Confidence 6777889999986
No 33
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.14 E-value=1.4e-10 Score=101.45 Aligned_cols=77 Identities=14% Similarity=0.238 Sum_probs=60.4
Q ss_pred CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290 3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL 82 (255)
Q Consensus 3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~ 82 (255)
+.+||++||||||+..+++++++.+.... .|.+|++||++++++...++.+++..+.... ..+++|+||||.
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~------~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~--~pv~~V~GNhD~ 74 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETG------ADAIVLIGNLLPKAAKSEDYAAFFRILGEAH--LPTFYVPGPQDA 74 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcC------CCEEEECCCCCCCCCCHHHHHHHHHHHHhcC--CceEEEcCCCCh
Confidence 46899999999999999999998775443 3899999999999976766666666654331 148999999997
Q ss_pred chhhh
Q 025290 83 GFAAF 87 (255)
Q Consensus 83 ~~~~~ 87 (255)
.+...
T Consensus 75 ~v~~~ 79 (224)
T cd07388 75 PLWEY 79 (224)
T ss_pred HHHHH
Confidence 64443
No 34
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.00 E-value=9.1e-10 Score=90.52 Aligned_cols=65 Identities=22% Similarity=0.268 Sum_probs=52.2
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
||+++|||+||+..+++.+++.+.... ..|.++++||++ +.++++.+.++.. ++++|+||||...
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~-----~~d~ii~~GD~~-----~~~~~~~l~~~~~-----~~~~V~GN~D~~~ 65 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLES-----NVDLVIHAGDLT-----SPFVLKEFEDLAA-----KVIAVRGNNDGER 65 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhcc-----CCCEEEEcCCCC-----CHHHHHHHHHhCC-----ceEEEccCCCchh
Confidence 689999999999988888777776541 148999999998 4678888876642 4899999999854
No 35
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=98.98 E-value=1.4e-09 Score=85.87 Aligned_cols=74 Identities=30% Similarity=0.343 Sum_probs=51.3
Q ss_pred CeEEEEccCCCCHHHH----HHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHH----HhCCCCCCCCcEEEE
Q 025290 5 RRVCCIGDVHGYISKL----QNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFL----ISLPTKYPNQKHVFL 76 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l----~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l----~~l~~~~p~~~v~~i 76 (255)
|||++|||+|+..... ..+.+..... ..+.+|++||+++++..+....... ...... ..++++
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~------~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 71 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAEN------KPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPK---IPVYFI 71 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHT------TTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTT---TTEEEE
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccC------CCCEEEeeccccccccccccchhhhccchhhhhcc---cccccc
Confidence 6899999999998877 3333333332 2489999999999998876655432 111111 269999
Q ss_pred CCCcccchhhh
Q 025290 77 SGNHDLGFAAF 87 (255)
Q Consensus 77 ~GNHE~~~~~~ 87 (255)
+||||......
T Consensus 72 ~GNHD~~~~~~ 82 (200)
T PF00149_consen 72 LGNHDYYSGNS 82 (200)
T ss_dssp E-TTSSHHHHH
T ss_pred ccccccceecc
Confidence 99999886543
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.94 E-value=1.5e-09 Score=87.65 Aligned_cols=61 Identities=28% Similarity=0.530 Sum_probs=47.6
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
|||+++||+|++..++.++++.++. .+.+|++||+++ ..++++.+.+. ++++|+||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~~~--------~d~vi~~GDi~~----~~~~~~~~~~~-------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYINE--------PDFVIILGDIFD----PEEVLELLRDI-------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHHTT--------ESEEEEES-SCS----HHHHHHHHHHH-------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHhcC--------CCEEEECCCchh----HHHHHHHHhcC-------CEEEEeCCccccc
Confidence 7999999999999999999998821 389999999998 48888888776 3899999999655
No 37
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.92 E-value=2.2e-09 Score=87.53 Aligned_cols=60 Identities=27% Similarity=0.376 Sum_probs=48.6
Q ss_pred eEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 6 RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 6 ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
|++++||+||+...+.++++.+.. .|.+|++||++++++.+. + ... ..+++|+||||...
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--------~d~ii~~GD~~~~~~~~~-----~---~~~---~~~~~V~GNhD~~~ 60 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--------VDLIIHAGDVLYPGPLNE-----L---ELK---APVIAVRGNCDGEV 60 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--------CCEEEECCccccccccch-----h---hcC---CcEEEEeCCCCCcC
Confidence 689999999999999999998753 289999999999988655 1 111 25899999999764
No 38
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.80 E-value=1.7e-08 Score=86.77 Aligned_cols=72 Identities=19% Similarity=0.281 Sum_probs=55.8
Q ss_pred CCeEEEEccCCCCHH----HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH-HHHHHHHhCCCCCCCCcEEEECC
Q 025290 4 PRRVCCIGDVHGYIS----KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR-EVIDFLISLPTKYPNQKHVFLSG 78 (255)
Q Consensus 4 ~~ri~vigDIHG~~~----~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~-~vl~~l~~l~~~~p~~~v~~i~G 78 (255)
++|++++||+|.... .++++++.+.... .|.++++||++|.+.... .+.+++..+.... .++++.|
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~------~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~---~v~~v~G 71 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALK------PDLVVLTGDLVDGSVDVLELLLELLKKLKAPL---GVYAVLG 71 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccC------CCEEEEcCcccCCcchhhHHHHHHHhccCCCC---CEEEECC
Confidence 479999999998743 6778887776543 389999999999887664 6777777765443 4899999
Q ss_pred Ccccch
Q 025290 79 NHDLGF 84 (255)
Q Consensus 79 NHE~~~ 84 (255)
|||...
T Consensus 72 NHD~~~ 77 (223)
T cd07385 72 NHDYYS 77 (223)
T ss_pred Cccccc
Confidence 999753
No 39
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.79 E-value=2e-08 Score=90.01 Aligned_cols=71 Identities=23% Similarity=0.211 Sum_probs=54.0
Q ss_pred CCeEEEEccCCCC----HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC--CChHHHHHHHHhCCCCCCCCcEEEEC
Q 025290 4 PRRVCCIGDVHGY----ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG--PNTREVIDFLISLPTKYPNQKHVFLS 77 (255)
Q Consensus 4 ~~ri~vigDIHG~----~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG--~~s~~vl~~l~~l~~~~p~~~v~~i~ 77 (255)
++||+++||+|.. ...++++++.+.... .|.++++||++|.+ ....++.+.+..+.... .+++|.
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~------pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~---pv~~V~ 119 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQK------PDLILLGGDYVLFDMPLNFSAFSDVLSPLAECA---PTFACF 119 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcC------CCEEEEccCcCCCCccccHHHHHHHHHHHhhcC---CEEEec
Confidence 5899999999976 556777887776543 38999999999943 23345667777776544 499999
Q ss_pred CCcccc
Q 025290 78 GNHDLG 83 (255)
Q Consensus 78 GNHE~~ 83 (255)
||||..
T Consensus 120 GNHD~~ 125 (271)
T PRK11340 120 GNHDRP 125 (271)
T ss_pred CCCCcc
Confidence 999974
No 40
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.75 E-value=2e-08 Score=83.52 Aligned_cols=65 Identities=25% Similarity=0.405 Sum_probs=46.9
Q ss_pred EEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-hHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 7 VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-TREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 7 i~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
|+++|||||+...+.+ ..+... ..|.+|++||+++++.. ..+.++.+.++.. .+++|+||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~------~~D~vv~~GDl~~~~~~~~~~~~~~l~~~~~-----p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAE------EADAVIVAGDITNFGGKEAAVEINLLLAIGV-----PVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhcc------CCCEEEECCCccCcCCHHHHHHHHHHHhcCC-----CEEEEcCCCCCHH
Confidence 5789999999988876 333222 24899999999999875 3344455554432 5899999999754
No 41
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.68 E-value=3e-08 Score=79.40 Aligned_cols=62 Identities=32% Similarity=0.657 Sum_probs=44.3
Q ss_pred eEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH--HHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 6 RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR--EVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 6 ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~--~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
||++|||+||+.. . +... ..|.+|++||+++++.... .+++++.++... .+++|+||||..
T Consensus 1 ~i~~isD~H~~~~----~---~~~~------~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~GNHD~~ 63 (135)
T cd07379 1 RFVCISDTHSRHR----T---ISIP------DGDVLIHAGDLTERGTLEELQKFLDWLKSLPHP----HKIVIAGNHDLT 63 (135)
T ss_pred CEEEEeCCCCCCC----c---CcCC------CCCEEEECCCCCCCCCHHHHHHHHHHHHhCCCC----eEEEEECCCCCc
Confidence 5899999999976 1 1111 2489999999999876432 467777766431 357899999965
Q ss_pred h
Q 025290 84 F 84 (255)
Q Consensus 84 ~ 84 (255)
.
T Consensus 64 ~ 64 (135)
T cd07379 64 L 64 (135)
T ss_pred C
Confidence 3
No 42
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.68 E-value=5.3e-08 Score=85.79 Aligned_cols=65 Identities=28% Similarity=0.526 Sum_probs=47.5
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
.||++||||||+..... .+.+.... .|.++++||+++ .+.++++.+.++.. .+++|+||||.+.
T Consensus 1 ~rIa~isDiHg~~~~~~--~~~l~~~~------pD~Vl~~GDi~~---~~~~~~~~l~~l~~-----p~~~V~GNHD~~~ 64 (238)
T cd07397 1 LRIAIVGDVHGQWDLED--IKALHLLQ------PDLVLFVGDFGN---ESVQLVRAISSLPL-----PKAVILGNHDAWY 64 (238)
T ss_pred CEEEEEecCCCCchHHH--HHHHhccC------CCEEEECCCCCc---ChHHHHHHHHhCCC-----CeEEEcCCCcccc
Confidence 37999999999976532 12232222 389999999986 45778888877642 4899999999865
Q ss_pred h
Q 025290 85 A 85 (255)
Q Consensus 85 ~ 85 (255)
.
T Consensus 65 ~ 65 (238)
T cd07397 65 D 65 (238)
T ss_pred c
Confidence 4
No 43
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.66 E-value=3.1e-08 Score=87.14 Aligned_cols=75 Identities=21% Similarity=0.274 Sum_probs=48.7
Q ss_pred CeEEEEccCCCCH---HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-------CChHHHHHHHHhCCCCCCCCcEE
Q 025290 5 RRVCCIGDVHGYI---SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-------PNTREVIDFLISLPTKYPNQKHV 74 (255)
Q Consensus 5 ~ri~vigDIHG~~---~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-------~~s~~vl~~l~~l~~~~p~~~v~ 74 (255)
||+++|||+|... ....++++.+..... ..|.++++||++|.. +...++++.+.++... +..++
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~----~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~--g~~v~ 74 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEAR----QADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS--GVPCY 74 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhc----cCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc--CCeEE
Confidence 6899999999542 222233333322111 248999999999862 2245677777777543 12599
Q ss_pred EECCCcccchh
Q 025290 75 FLSGNHDLGFA 85 (255)
Q Consensus 75 ~i~GNHE~~~~ 85 (255)
+|.||||..+.
T Consensus 75 ~v~GNHD~~~~ 85 (241)
T PRK05340 75 FMHGNRDFLLG 85 (241)
T ss_pred EEeCCCchhhh
Confidence 99999997544
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.57 E-value=4.9e-08 Score=80.60 Aligned_cols=67 Identities=16% Similarity=0.197 Sum_probs=45.3
Q ss_pred EEEEccCCCCHHHHHHHHH-HhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 7 VCCIGDVHGYISKLQNLWK-NLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 7 i~vigDIHG~~~~l~~lL~-~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
+.++||+|++.......+. .+... ..|.++++||+++.+.....+. ++...... ..+++|+||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~------~~d~li~~GDi~~~~~~~~~~~-~~~~~~~~---~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAP------DADILVLAGDIGYLTDAPRFAP-LLLALKGF---EPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCC------CCCEEEECCCCCCCcchHHHHH-HHHhhcCC---ccEEEeCCCcceE
Confidence 4689999999876665542 12111 3589999999999887654443 22222222 2599999999986
No 45
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.57 E-value=1.7e-07 Score=82.19 Aligned_cols=68 Identities=24% Similarity=0.284 Sum_probs=50.6
Q ss_pred eEEEEccCCCCH------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCC
Q 025290 6 RVCCIGDVHGYI------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGN 79 (255)
Q Consensus 6 ri~vigDIHG~~------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GN 79 (255)
||++|||+|.+. ..+.++++.+.... .|.+|++||+++..+.+.++++.+.++. .. .+++|+||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~------~d~vv~~GDl~~~~~~~~~~~~~l~~~~-~~---pv~~v~GN 70 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQK------IDHLHIAGDISNDFQRSLPFIEKLQELK-GI---KVTFNAGN 70 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcC------CCEEEECCccccchhhHHHHHHHHHHhc-CC---cEEEECCC
Confidence 689999999653 23667777775443 4899999999998766667777666542 12 58999999
Q ss_pred cccc
Q 025290 80 HDLG 83 (255)
Q Consensus 80 HE~~ 83 (255)
||..
T Consensus 71 HD~~ 74 (239)
T TIGR03729 71 HDML 74 (239)
T ss_pred CCCC
Confidence 9964
No 46
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.40 E-value=9.4e-07 Score=78.54 Aligned_cols=72 Identities=26% Similarity=0.345 Sum_probs=48.9
Q ss_pred CeEEEEccCC-CC-----------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHH----HHHHHHhCCCCC
Q 025290 5 RRVCCIGDVH-GY-----------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTRE----VIDFLISLPTKY 68 (255)
Q Consensus 5 ~ri~vigDIH-G~-----------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~----vl~~l~~l~~~~ 68 (255)
||++.+||+| |. ...|..+++.+.... .|.++++||++|+...+.. ..+++..+....
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~------~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~ 74 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQ------IDALLVAGDVFDTANPPAEAQELFNAFFRNLSDAN 74 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcC------CCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 7899999999 32 234566666665433 4899999999998754432 234555554432
Q ss_pred CCCcEEEECCCcccc
Q 025290 69 PNQKHVFLSGNHDLG 83 (255)
Q Consensus 69 p~~~v~~i~GNHE~~ 83 (255)
| ..+++|.||||..
T Consensus 75 ~-i~v~~i~GNHD~~ 88 (253)
T TIGR00619 75 P-IPIVVISGNHDSA 88 (253)
T ss_pred C-ceEEEEccCCCCh
Confidence 1 2589999999974
No 47
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.37 E-value=1.2e-06 Score=76.02 Aligned_cols=69 Identities=23% Similarity=0.401 Sum_probs=49.3
Q ss_pred eEEEEccCCCC------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--HHHHHHHHhCCCCCCCC
Q 025290 6 RVCCIGDVHGY------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--REVIDFLISLPTKYPNQ 71 (255)
Q Consensus 6 ri~vigDIHG~------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--~~vl~~l~~l~~~~p~~ 71 (255)
|+++|||+|=. ...++++++.+..... ..+.+|++||+++.+... ..+++.+.++..
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~----~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~~~----- 71 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHP----RPDLVLVTGDLTDDGSPESYERLRELLAALPI----- 71 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCC----CCCEEEECccCCCCCCHHHHHHHHHHHhhcCC-----
Confidence 68999999933 3467888887765421 248999999999986532 345555555532
Q ss_pred cEEEECCCcccc
Q 025290 72 KHVFLSGNHDLG 83 (255)
Q Consensus 72 ~v~~i~GNHE~~ 83 (255)
.+++|+||||..
T Consensus 72 p~~~v~GNHD~~ 83 (240)
T cd07402 72 PVYLLPGNHDDR 83 (240)
T ss_pred CEEEeCCCCCCH
Confidence 589999999974
No 48
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.35 E-value=1.6e-06 Score=77.44 Aligned_cols=69 Identities=25% Similarity=0.309 Sum_probs=48.9
Q ss_pred eEEEEccCC-CC------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-h----HHHHHHHHhCCCC
Q 025290 6 RVCCIGDVH-GY------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-T----REVIDFLISLPTK 67 (255)
Q Consensus 6 ri~vigDIH-G~------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s----~~vl~~l~~l~~~ 67 (255)
|+++|||+| +. ...++++++.+.... .|.+|++||+++.+.. + .++.+.+..+..
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~------~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~- 74 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRES------LDFVVQLGDIIDGDNARAEEALDAVLAILDRLKG- 74 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCC------CCEEEECCCeecCCCchHHHHHHHHHHHHHhcCC-
Confidence 799999999 21 456777888876543 3899999999988863 2 223444444432
Q ss_pred CCCCcEEEECCCcccchh
Q 025290 68 YPNQKHVFLSGNHDLGFA 85 (255)
Q Consensus 68 ~p~~~v~~i~GNHE~~~~ 85 (255)
.+++++||||....
T Consensus 75 ----p~~~v~GNHD~~~~ 88 (267)
T cd07396 75 ----PVHHVLGNHDLYNP 88 (267)
T ss_pred ----CEEEecCccccccc
Confidence 59999999997543
No 49
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.34 E-value=1.4e-06 Score=78.02 Aligned_cols=70 Identities=21% Similarity=0.316 Sum_probs=49.6
Q ss_pred CCeEEEEccCC-C-----------CHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-h-HHHHHHHHhCCCCCC
Q 025290 4 PRRVCCIGDVH-G-----------YISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-T-REVIDFLISLPTKYP 69 (255)
Q Consensus 4 ~~ri~vigDIH-G-----------~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s-~~vl~~l~~l~~~~p 69 (255)
++|++.|||+| . ....|+++++.+..... ..|.+|++||+++.+.. . ..+.+.+.++..
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~----~~D~vvitGDl~~~~~~~~~~~~~~~l~~l~~--- 86 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQH----EFDLIVATGDLAQDHSSEAYQHFAEGIAPLRK--- 86 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCC----CCCEEEECCCCCCCCCHHHHHHHHHHHhhcCC---
Confidence 58999999999 1 14668888888765422 24899999999998742 1 233444444432
Q ss_pred CCcEEEECCCccc
Q 025290 70 NQKHVFLSGNHDL 82 (255)
Q Consensus 70 ~~~v~~i~GNHE~ 82 (255)
.+++|+||||.
T Consensus 87 --Pv~~v~GNHD~ 97 (275)
T PRK11148 87 --PCVWLPGNHDF 97 (275)
T ss_pred --cEEEeCCCCCC
Confidence 59999999996
No 50
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.31 E-value=2e-06 Score=71.54 Aligned_cols=70 Identities=23% Similarity=0.386 Sum_probs=48.1
Q ss_pred EEEEccCCCCHHH---------------HHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCC
Q 025290 7 VCCIGDVHGYISK---------------LQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQ 71 (255)
Q Consensus 7 i~vigDIHG~~~~---------------l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~ 71 (255)
+++|||+|=.... ..++++.+..... +.|.+|++||+++++..+.. ++++.++..
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~d~vi~~GDl~~~~~~~~~-~~~l~~~~~----- 70 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVG----PDDTVYHLGDFSFGGKAGTE-LELLSRLNG----- 70 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcC----CCCEEEEeCCCCCCCChHHH-HHHHHhCCC-----
Confidence 3799999944332 2345555554322 35899999999999886544 666666542
Q ss_pred cEEEECCCcccchhh
Q 025290 72 KHVFLSGNHDLGFAA 86 (255)
Q Consensus 72 ~v~~i~GNHE~~~~~ 86 (255)
.+++|+||||.....
T Consensus 71 ~~~~v~GNHD~~~~~ 85 (168)
T cd07390 71 RKHLIKGNHDSSLER 85 (168)
T ss_pred CeEEEeCCCCchhhh
Confidence 589999999976553
No 51
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.31 E-value=9.5e-07 Score=81.77 Aligned_cols=71 Identities=27% Similarity=0.355 Sum_probs=47.4
Q ss_pred CeEEEEccCC-CC-----------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-CChHHHHHHHHh-----CCC
Q 025290 5 RRVCCIGDVH-GY-----------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-PNTREVIDFLIS-----LPT 66 (255)
Q Consensus 5 ~ri~vigDIH-G~-----------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-~~s~~vl~~l~~-----l~~ 66 (255)
||++.+||+| |. ...|.++++.+.... .|.++++||++|.. +.+.+++.++.+ +..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~------vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~ 74 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHG------ITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKE 74 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcC------CCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 7999999999 42 244556666665443 38999999999985 344444443332 221
Q ss_pred CCCCCcEEEECCCcccc
Q 025290 67 KYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 67 ~~p~~~v~~i~GNHE~~ 83 (255)
. +..+++|.||||..
T Consensus 75 ~--gi~v~~I~GNHD~~ 89 (340)
T PHA02546 75 A--GITLHVLVGNHDMY 89 (340)
T ss_pred C--CCeEEEEccCCCcc
Confidence 1 23699999999974
No 52
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.30 E-value=1.1e-06 Score=76.96 Aligned_cols=72 Identities=18% Similarity=0.198 Sum_probs=45.5
Q ss_pred EEEEccCCCCH---HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCC-----C--hHHHHHHHHhCCCCCCCCcEEEE
Q 025290 7 VCCIGDVHGYI---SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGP-----N--TREVIDFLISLPTKYPNQKHVFL 76 (255)
Q Consensus 7 i~vigDIHG~~---~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~-----~--s~~vl~~l~~l~~~~p~~~v~~i 76 (255)
+++|||+|... ...+.+++.+..... ..|.+|++||++|... . ..++.+.+..+.... ..+++|
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~----~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~--~~v~~v 74 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR----KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQG--VPCYFM 74 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc----cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCC--CeEEEE
Confidence 37899999543 233444554433211 1489999999999531 1 235566666665431 269999
Q ss_pred CCCcccch
Q 025290 77 SGNHDLGF 84 (255)
Q Consensus 77 ~GNHE~~~ 84 (255)
.||||...
T Consensus 75 ~GNHD~~~ 82 (231)
T TIGR01854 75 HGNRDFLI 82 (231)
T ss_pred cCCCchhh
Confidence 99999754
No 53
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.30 E-value=1.8e-06 Score=66.18 Aligned_cols=66 Identities=27% Similarity=0.476 Sum_probs=44.4
Q ss_pred EEEccCCCCHHHHHHHH--HHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHH-HHhCCCCCCCCcEEEECCCcc
Q 025290 8 CCIGDVHGYISKLQNLW--KNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF-LISLPTKYPNQKHVFLSGNHD 81 (255)
Q Consensus 8 ~vigDIHG~~~~l~~lL--~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~-l~~l~~~~p~~~v~~i~GNHE 81 (255)
+++||+|+......... ...... ..+.+|++||+++.+......... +..+... ...++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~------~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAE------KPDFVLVLGDLVGDGPDPEEVLAAALALLLLL--GIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhccc------CCCEEEECCcccCCCCCchHHHHHHHHHhhcC--CCCEEEeCCCce
Confidence 47999999988887754 222221 358999999999988776544332 2222211 125999999999
No 54
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.27 E-value=2.4e-06 Score=72.07 Aligned_cols=62 Identities=24% Similarity=0.408 Sum_probs=43.4
Q ss_pred eEEEEccCC-CCHH-HH-HHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290 6 RVCCIGDVH-GYIS-KL-QNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL 82 (255)
Q Consensus 6 ri~vigDIH-G~~~-~l-~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~ 82 (255)
+|.||||+| |... .+ ..+++.++.. ..|.+|.+||+++ .++++++.++.. ++++|+||||.
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~------~~d~iih~GDi~~-----~~~~~~l~~~~~-----~~~~V~GN~D~ 64 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPG------KIQHVLCTGNLCS-----KETYDYLKTIAP-----DVHIVRGDFDE 64 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccC------CCCEEEECCCCCC-----HHHHHHHHhhCC-----ceEEEECCCCc
Confidence 589999999 5432 12 2344444322 2489999999986 778888877642 48999999997
Q ss_pred c
Q 025290 83 G 83 (255)
Q Consensus 83 ~ 83 (255)
.
T Consensus 65 ~ 65 (178)
T cd07394 65 N 65 (178)
T ss_pred c
Confidence 5
No 55
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.24 E-value=3e-06 Score=68.01 Aligned_cols=68 Identities=25% Similarity=0.475 Sum_probs=44.4
Q ss_pred EEEEccCCCCHH------H----HHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--HHHHHHHHhCCCCCCCCcEE
Q 025290 7 VCCIGDVHGYIS------K----LQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--REVIDFLISLPTKYPNQKHV 74 (255)
Q Consensus 7 i~vigDIHG~~~------~----l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--~~vl~~l~~l~~~~p~~~v~ 74 (255)
|+.|||+|=... . |.++++.+... ..|.++++||+++.+... ....+++..+.... ..++
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~------~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 72 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKAL------DPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL--EPVL 72 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhcc------CCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC--CcEE
Confidence 578999992211 1 12244444333 248999999999987642 34556677766532 1589
Q ss_pred EECCCccc
Q 025290 75 FLSGNHDL 82 (255)
Q Consensus 75 ~i~GNHE~ 82 (255)
+|+||||.
T Consensus 73 ~v~GNHD~ 80 (144)
T cd07400 73 VVPGNHDV 80 (144)
T ss_pred EeCCCCeE
Confidence 99999998
No 56
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=98.23 E-value=2.6e-06 Score=71.08 Aligned_cols=73 Identities=25% Similarity=0.374 Sum_probs=43.3
Q ss_pred EEEccCC-CCH----------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-HHHHHH--HHhCCCC
Q 025290 8 CCIGDVH-GYI----------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-REVIDF--LISLPTK 67 (255)
Q Consensus 8 ~vigDIH-G~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-~~vl~~--l~~l~~~ 67 (255)
++|||+| |.- +.++++++.+.... .+.+|++||+++....+ .+.... +..+...
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~------~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~ 74 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYG------PERLIILGDLKHSFGGLSRQEFEEVAFLRLLAK 74 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcC------CCEEEEeCcccccccccCHHHHHHHHHHHhccC
Confidence 3799999 322 23445555554432 38999999999865432 222221 1222211
Q ss_pred CCCCcEEEECCCcccchhhhh
Q 025290 68 YPNQKHVFLSGNHDLGFAAFV 88 (255)
Q Consensus 68 ~p~~~v~~i~GNHE~~~~~~~ 88 (255)
+.++++|+||||..+...+
T Consensus 75 --~~~v~~i~GNHD~~~~~~~ 93 (172)
T cd07391 75 --DVDVILIRGNHDGGLPEIL 93 (172)
T ss_pred --CCeEEEEcccCccchhhhh
Confidence 2369999999998766543
No 57
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=98.21 E-value=2.1e-06 Score=73.36 Aligned_cols=72 Identities=19% Similarity=0.242 Sum_probs=48.9
Q ss_pred eEEEEccCC-CCH--------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH----HHHHHHHhCCC
Q 025290 6 RVCCIGDVH-GYI--------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR----EVIDFLISLPT 66 (255)
Q Consensus 6 ri~vigDIH-G~~--------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~----~vl~~l~~l~~ 66 (255)
|++.+||+| |.. ..|.++++.+.... .|.++++||+++....+. .+.+.+.++..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~ 74 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEK------VDFVLIAGDLFDSNNPSPEALELLIEALRRLKE 74 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcC------CCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH
Confidence 689999999 322 24666777665543 389999999999876443 34555555531
Q ss_pred CCCCCcEEEECCCcccchh
Q 025290 67 KYPNQKHVFLSGNHDLGFA 85 (255)
Q Consensus 67 ~~p~~~v~~i~GNHE~~~~ 85 (255)
++..++++.||||....
T Consensus 75 --~~~~v~~~~GNHD~~~~ 91 (223)
T cd00840 75 --AGIPVFIIAGNHDSPSR 91 (223)
T ss_pred --CCCCEEEecCCCCCccc
Confidence 11258999999997543
No 58
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.16 E-value=6.9e-06 Score=71.32 Aligned_cols=72 Identities=19% Similarity=0.287 Sum_probs=55.1
Q ss_pred CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcC--CCCCChHHHH----HHHHhCCCCCCCCcEEEE
Q 025290 3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYC--DRGPNTREVI----DFLISLPTKYPNQKHVFL 76 (255)
Q Consensus 3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlv--DrG~~s~~vl----~~l~~l~~~~p~~~v~~i 76 (255)
++||+.+++|+||..+.+.+++..+.... .|.+|+.||+. +.|+.-.... +.+..... .++++
T Consensus 2 ~~mkil~vtDlHg~~~~~~k~~~~~~~~~------~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~~~-----~v~av 70 (226)
T COG2129 2 KKMKILAVTDLHGSEDSLKKLLNAAADIR------ADLLVIAGDLTYFHFGPKEVAEELNKLEALKELGI-----PVLAV 70 (226)
T ss_pred CcceEEEEeccccchHHHHHHHHHHhhcc------CCEEEEecceehhhcCchHHHHhhhHHHHHHhcCC-----eEEEE
Confidence 57899999999999999999998876432 48999999999 8887543322 34443332 69999
Q ss_pred CCCcccchh
Q 025290 77 SGNHDLGFA 85 (255)
Q Consensus 77 ~GNHE~~~~ 85 (255)
+||.|...+
T Consensus 71 pGNcD~~~v 79 (226)
T COG2129 71 PGNCDPPEV 79 (226)
T ss_pred cCCCChHHH
Confidence 999996544
No 59
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.14 E-value=6.9e-06 Score=71.91 Aligned_cols=67 Identities=22% Similarity=0.369 Sum_probs=43.6
Q ss_pred EEEEccCCCC--------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC--hHHHHHHHHhCCCCCCC
Q 025290 7 VCCIGDVHGY--------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN--TREVIDFLISLPTKYPN 70 (255)
Q Consensus 7 i~vigDIHG~--------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~--s~~vl~~l~~l~~~~p~ 70 (255)
|++++|+|-. .+.++++.+.++...+ ..|.+|++||++++++. ..+.++++.++..
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~----~~D~viiaGDl~~~~~~~~~~~~l~~l~~l~~---- 72 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVA----PEDIVLIPGDISWAMKLEEAKLDLAWIDALPG---- 72 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCC----CCCEEEEcCCCccCCChHHHHHHHHHHHhCCC----
Confidence 5899999955 1233344444333221 34999999999987653 2355566665432
Q ss_pred CcEEEECCCccc
Q 025290 71 QKHVFLSGNHDL 82 (255)
Q Consensus 71 ~~v~~i~GNHE~ 82 (255)
.+++|+||||.
T Consensus 73 -~v~~V~GNHD~ 83 (232)
T cd07393 73 -TKVLLKGNHDY 83 (232)
T ss_pred -CeEEEeCCccc
Confidence 48999999997
No 60
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.12 E-value=3.9e-06 Score=67.01 Aligned_cols=57 Identities=21% Similarity=0.375 Sum_probs=40.4
Q ss_pred EEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290 8 CCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL 82 (255)
Q Consensus 8 ~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~ 82 (255)
.||||+||....+.++.... . ..|.++++||+. .++++.+.++.. ..+++|+||||.
T Consensus 1 ~viSDtH~~~~~~~~~~~~~--~------~~d~ii~~GD~~------~~~~~~~~~~~~----~~~~~V~GN~D~ 57 (129)
T cd07403 1 LVISDTESPALYSPEIKVRL--E------GVDLILSAGDLP------KEYLEYLVTMLN----VPVYYVHGNHDV 57 (129)
T ss_pred CeeccccCccccchHHHhhC--C------CCCEEEECCCCC------hHHHHHHHHHcC----CCEEEEeCCCcc
Confidence 48999999977777765541 1 248999999974 344566666521 148899999993
No 61
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=98.11 E-value=1.3e-05 Score=65.98 Aligned_cols=71 Identities=21% Similarity=0.312 Sum_probs=51.5
Q ss_pred CCeEEEEccCC------------CCHHHHHH-HHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCC
Q 025290 4 PRRVCCIGDVH------------GYISKLQN-LWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPN 70 (255)
Q Consensus 4 ~~ri~vigDIH------------G~~~~l~~-lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~ 70 (255)
+..+++|||+| .+.+.+.+ +|..+..... +.|.+++|||+.-.--...+..+++..|.
T Consensus 3 m~mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~----p~D~lwhLGDl~~~~n~~~~a~~IlerLn----- 73 (186)
T COG4186 3 MTMMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVG----PDDVLWHLGDLSSGANRERAAGLILERLN----- 73 (186)
T ss_pred eeEEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCC----ccceEEEecccccccchhhHHHHHHHHcC-----
Confidence 34689999999 45555544 5566654433 57999999999875555667777777775
Q ss_pred CcEEEECCCcccc
Q 025290 71 QKHVFLSGNHDLG 83 (255)
Q Consensus 71 ~~v~~i~GNHE~~ 83 (255)
+++++|+||||-.
T Consensus 74 Grkhlv~GNhDk~ 86 (186)
T COG4186 74 GRKHLVPGNHDKC 86 (186)
T ss_pred CcEEEeeCCCCCC
Confidence 3689999999954
No 62
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.09 E-value=7.4e-06 Score=77.70 Aligned_cols=71 Identities=30% Similarity=0.420 Sum_probs=45.7
Q ss_pred CeEEEEccCC-CCH-------HH----HHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHH---H-HHHHHhCCCCC
Q 025290 5 RRVCCIGDVH-GYI-------SK----LQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTRE---V-IDFLISLPTKY 68 (255)
Q Consensus 5 ~ri~vigDIH-G~~-------~~----l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~---v-l~~l~~l~~~~ 68 (255)
||++.+||+| |.. .. +..+++.+.... .|.+|++||++|++..+.. . .+++..+...
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~------~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~- 73 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQ------VDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT- 73 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcC------CCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-
Confidence 6899999999 321 11 334555554433 4899999999998754432 2 2344444432
Q ss_pred CCCcEEEECCCcccc
Q 025290 69 PNQKHVFLSGNHDLG 83 (255)
Q Consensus 69 p~~~v~~i~GNHE~~ 83 (255)
+..+++|.||||..
T Consensus 74 -~~~v~~I~GNHD~~ 87 (407)
T PRK10966 74 -GCQLVVLAGNHDSV 87 (407)
T ss_pred -CCcEEEEcCCCCCh
Confidence 12599999999964
No 63
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.09 E-value=1e-05 Score=76.72 Aligned_cols=50 Identities=14% Similarity=0.188 Sum_probs=39.5
Q ss_pred CCCeEEEEccCCCC------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHH
Q 025290 3 RPRRVCCIGDVHGY------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVI 58 (255)
Q Consensus 3 ~~~ri~vigDIHG~------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl 58 (255)
..|||+++||+|-. +.+|.++++.+.... .|.+++.||++|+..-|.+++
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~------vD~VLiaGDLFd~~~Ps~~~~ 63 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQD------VDMILLGGDLFHENKPSRKSL 63 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcC------CCEEEECCccCCCCCCCHHHH
Confidence 35899999999933 457788888886554 399999999999987776554
No 64
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.09 E-value=8.5e-06 Score=70.50 Aligned_cols=68 Identities=26% Similarity=0.347 Sum_probs=43.8
Q ss_pred eEEEEccCCCC----HHHH----HHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH---HHHHHHHhCC-CCCCCCcE
Q 025290 6 RVCCIGDVHGY----ISKL----QNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR---EVIDFLISLP-TKYPNQKH 73 (255)
Q Consensus 6 ri~vigDIHG~----~~~l----~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~---~vl~~l~~l~-~~~p~~~v 73 (255)
+++++||+|-. ...+ ..+++.+.... .+.+|++||+++.+.... ...+.+..+. ... .+
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~------~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~---p~ 72 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALN------IAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGI---PY 72 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcC------CCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCC---cE
Confidence 78999999942 2333 33444443322 389999999999887432 3334444443 223 48
Q ss_pred EEECCCccc
Q 025290 74 VFLSGNHDL 82 (255)
Q Consensus 74 ~~i~GNHE~ 82 (255)
++++||||.
T Consensus 73 ~~~~GNHD~ 81 (214)
T cd07399 73 SVLAGNHDL 81 (214)
T ss_pred EEECCCCcc
Confidence 899999994
No 65
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=98.08 E-value=1.2e-05 Score=70.33 Aligned_cols=73 Identities=19% Similarity=0.292 Sum_probs=45.3
Q ss_pred CeEEEEccCC-CCHHHHH------------HHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC---hHHHHHHHHhCCCCC
Q 025290 5 RRVCCIGDVH-GYISKLQ------------NLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN---TREVIDFLISLPTKY 68 (255)
Q Consensus 5 ~ri~vigDIH-G~~~~l~------------~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~---s~~vl~~l~~l~~~~ 68 (255)
.++++|||+| |....+. +.|+.+..... ....+.+|++||+.+.... ..++.+++..+..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~--~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~~-- 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIAD--KYGIEALIINGDLKHEFKKGLEWRFIREFIEVTFR-- 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHh--hcCCCEEEEcCccccccCChHHHHHHHHHHHhcCC--
Confidence 4789999999 5433322 23333322110 0124899999999975543 3445556666542
Q ss_pred CCCcEEEECCCcccch
Q 025290 69 PNQKHVFLSGNHDLGF 84 (255)
Q Consensus 69 p~~~v~~i~GNHE~~~ 84 (255)
.+++|+||||...
T Consensus 91 ---~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 ---DLILIRGNHDALI 103 (225)
T ss_pred ---cEEEECCCCCCcc
Confidence 5999999999765
No 66
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.07 E-value=6.7e-06 Score=67.86 Aligned_cols=46 Identities=24% Similarity=0.474 Sum_probs=29.4
Q ss_pred CcEEEEeCCcCCCCCCh-H----HHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 38 SAIIIFLGDYCDRGPNT-R----EVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 38 ~d~li~lGDlvDrG~~s-~----~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
.|.+|++||+++.+... . +.+..+.++....++..+++|+||||..
T Consensus 39 pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 39 PDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred CCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 48999999999987532 1 2233333332222223699999999974
No 67
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.07 E-value=1.8e-05 Score=70.13 Aligned_cols=75 Identities=21% Similarity=0.283 Sum_probs=49.1
Q ss_pred CCCCeEEEEccCCCCH----------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH-------HHH
Q 025290 2 SRPRRVCCIGDVHGYI----------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR-------EVI 58 (255)
Q Consensus 2 ~~~~ri~vigDIHG~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~-------~vl 58 (255)
+.+-+++++||+|-.. ..++++++.+....+ ..+.+|++||+++.+.... ...
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~----~pd~ii~~GDl~~~~~~~~~~~~~~~~~~ 77 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNP----KPKFVVVCGDLVNAMPGDELRERQVSDLK 77 (262)
T ss_pred CCCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCC----CCCEEEEeCCcCCCCcchhhHHHHHHHHH
Confidence 3467899999999552 235666666654321 2489999999999886531 223
Q ss_pred HHHHhCCCCCCCCcEEEECCCcccc
Q 025290 59 DFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 59 ~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
+.+.++. ++..++.++||||..
T Consensus 78 ~~~~~~~---~~vp~~~i~GNHD~~ 99 (262)
T cd07395 78 DVLSLLD---PDIPLVCVCGNHDVG 99 (262)
T ss_pred HHHhhcc---CCCcEEEeCCCCCCC
Confidence 3333332 223599999999973
No 68
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.07 E-value=1.2e-05 Score=72.87 Aligned_cols=73 Identities=23% Similarity=0.402 Sum_probs=55.6
Q ss_pred CCeEEEEccCCCCHHH--HHHHHHHhhhccCCCCCCCcEEEEeCCcCCC--CCChHHHHHHHHhCCCCCCCCcEEEECCC
Q 025290 4 PRRVCCIGDVHGYISK--LQNLWKNLETHIGPSDFNSAIIIFLGDYCDR--GPNTREVIDFLISLPTKYPNQKHVFLSGN 79 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~--l~~lL~~~~~~~~~~~~~~d~li~lGDlvDr--G~~s~~vl~~l~~l~~~~p~~~v~~i~GN 79 (255)
..||+.+||+|.+... ..+++..+.... .|.++++||++|+ -+...++...+..+...++ +++|.||
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~------~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~g---v~av~GN 114 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANEL------PDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLG---VFAVLGN 114 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcC------CCEEEEEeeeecCCCCCCHHHHHHHHHhhhccCC---EEEEecc
Confidence 4689999999977433 344555554433 3999999999995 5667788999999988764 9999999
Q ss_pred cccchh
Q 025290 80 HDLGFA 85 (255)
Q Consensus 80 HE~~~~ 85 (255)
||...-
T Consensus 115 Hd~~~~ 120 (284)
T COG1408 115 HDYGVD 120 (284)
T ss_pred cccccc
Confidence 997543
No 69
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=98.06 E-value=1.8e-05 Score=69.93 Aligned_cols=75 Identities=23% Similarity=0.328 Sum_probs=51.2
Q ss_pred CeEEEEccCCCC------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-h-HHHHHHHHhCCCCCCCCcEEEE
Q 025290 5 RRVCCIGDVHGY------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-T-REVIDFLISLPTKYPNQKHVFL 76 (255)
Q Consensus 5 ~ri~vigDIHG~------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s-~~vl~~l~~l~~~~p~~~v~~i 76 (255)
+||+.|||+|-. ...+.++++.++... .|.+|++||+.+.|.. + ....+++...... ..++++
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~------~D~~v~tGDl~~~~~~~~~~~~~~~l~~~~~~---~~~~~v 71 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLK------PDLLVVTGDLTNDGEPEEYRRLKELLARLELP---APVIVV 71 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCC------CCEEEEccCcCCCCCHHHHHHHHHHHhhccCC---CceEee
Confidence 589999999955 345566777776332 3999999999999653 2 2344455422222 258999
Q ss_pred CCCcccchhhhh
Q 025290 77 SGNHDLGFAAFV 88 (255)
Q Consensus 77 ~GNHE~~~~~~~ 88 (255)
+||||.......
T Consensus 72 pGNHD~~~~~~~ 83 (301)
T COG1409 72 PGNHDARVVNGE 83 (301)
T ss_pred CCCCcCCchHHH
Confidence 999997766543
No 70
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.05 E-value=1.4e-05 Score=77.73 Aligned_cols=78 Identities=24% Similarity=0.372 Sum_probs=50.4
Q ss_pred CCeEEEEccCC-CCH----HHHHHHHHHhhhccCCC---CCCCcEEEEeCCcCCC-CCCh---------------HHHHH
Q 025290 4 PRRVCCIGDVH-GYI----SKLQNLWKNLETHIGPS---DFNSAIIIFLGDYCDR-GPNT---------------REVID 59 (255)
Q Consensus 4 ~~ri~vigDIH-G~~----~~l~~lL~~~~~~~~~~---~~~~d~li~lGDlvDr-G~~s---------------~~vl~ 59 (255)
..++++|||+| |.. ..++.+++.+....... ....+.+|++||++|. |+.+ .++.+
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 46899999999 542 34566666655221100 0124799999999994 2211 24667
Q ss_pred HHHhCCCCCCCCcEEEECCCcccch
Q 025290 60 FLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 60 ~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
++.++.... .+++++||||...
T Consensus 323 ~L~~L~~~i---~V~~ipGNHD~~~ 344 (504)
T PRK04036 323 YLKQIPEDI---KIIISPGNHDAVR 344 (504)
T ss_pred HHHhhhcCC---eEEEecCCCcchh
Confidence 777776543 5999999999754
No 71
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.02 E-value=1.2e-05 Score=67.68 Aligned_cols=66 Identities=23% Similarity=0.283 Sum_probs=45.7
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHh-CCCCCCCCcEEEECCCccc
Q 025290 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS-LPTKYPNQKHVFLSGNHDL 82 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~-l~~~~p~~~v~~i~GNHE~ 82 (255)
+|+|.|+||+|+...+....++...... .|.+|.+||++...+ +..+.. +.. +++.|+||+|.
T Consensus 1 ~m~ilviSDtH~~~~~~~~~~~~~~~~~------~d~vih~GD~~~~~~-----~~~l~~~~~~-----~i~~V~GN~D~ 64 (172)
T COG0622 1 MMKILVISDTHGPLRAIEKALKIFNLEK------VDAVIHAGDSTSPFT-----LDALEGGLAA-----KLIAVRGNCDG 64 (172)
T ss_pred CcEEEEEeccCCChhhhhHHHHHhhhcC------CCEEEECCCcCCccc-----hHHhhccccc-----ceEEEEccCCC
Confidence 4899999999999865455554443332 489999999996543 222222 222 68999999998
Q ss_pred chh
Q 025290 83 GFA 85 (255)
Q Consensus 83 ~~~ 85 (255)
...
T Consensus 65 ~~~ 67 (172)
T COG0622 65 EVD 67 (172)
T ss_pred ccc
Confidence 643
No 72
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.99 E-value=1.3e-05 Score=75.34 Aligned_cols=72 Identities=19% Similarity=0.287 Sum_probs=50.7
Q ss_pred CeEEEEccCC-C------------CHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHH----HHHHHhCCCC
Q 025290 5 RRVCCIGDVH-G------------YISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREV----IDFLISLPTK 67 (255)
Q Consensus 5 ~ri~vigDIH-G------------~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~v----l~~l~~l~~~ 67 (255)
||++.+||.| | .+.+|..+++.+.... .|.+|+.||++|+..-|..+ ++.++.++.
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~------vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~- 73 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEK------VDFVLIAGDLFDTNNPSPRALKLFLEALRRLKD- 73 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHcc------CCEEEEccccccCCCCCHHHHHHHHHHHHHhcc-
Confidence 7999999999 4 2455566777765543 39999999999987655443 344444443
Q ss_pred CCCCcEEEECCCcccch
Q 025290 68 YPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 68 ~p~~~v~~i~GNHE~~~ 84 (255)
.+..++.|.||||..-
T Consensus 74 -~~Ipv~~I~GNHD~~~ 89 (390)
T COG0420 74 -AGIPVVVIAGNHDSPS 89 (390)
T ss_pred -CCCcEEEecCCCCchh
Confidence 2346999999999643
No 73
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.96 E-value=3.1e-05 Score=65.85 Aligned_cols=69 Identities=17% Similarity=0.241 Sum_probs=42.0
Q ss_pred CCeEEEEccCCCCHH------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh---HHHHHHHHh-CCC-
Q 025290 4 PRRVCCIGDVHGYIS------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT---REVIDFLIS-LPT- 66 (255)
Q Consensus 4 ~~ri~vigDIHG~~~------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s---~~vl~~l~~-l~~- 66 (255)
.+|+++|||+|-... .+..+.+.+... ..+.+|++||+++.+... .+.++.+.+ +..
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~ 75 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAE------KPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDR 75 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhc------CCCEEEECCccccCCCCchHHHHHHHHHHHHHHHc
Confidence 468999999994221 122222333322 248999999999976643 344433322 221
Q ss_pred CCCCCcEEEECCCcc
Q 025290 67 KYPNQKHVFLSGNHD 81 (255)
Q Consensus 67 ~~p~~~v~~i~GNHE 81 (255)
.. .++++.||||
T Consensus 76 ~~---p~~~~~GNHD 87 (199)
T cd07383 76 KI---PWAATFGNHD 87 (199)
T ss_pred CC---CEEEECccCC
Confidence 22 4889999999
No 74
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.93 E-value=2e-05 Score=68.76 Aligned_cols=73 Identities=19% Similarity=0.283 Sum_probs=44.8
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH----------------------------
Q 025290 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR---------------------------- 55 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~---------------------------- 55 (255)
.++|++|||.||+++.+.++.+.+....+ |.++++||++-....+.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~------D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~ 78 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGP------DAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEAL 78 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-------SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCC------CEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHH
Confidence 57899999999999999999999877654 99999999986543222
Q ss_pred -HHHHHHHhCCCCCCCCcEEEECCCcccchhhh
Q 025290 56 -EVIDFLISLPTKYPNQKHVFLSGNHDLGFAAF 87 (255)
Q Consensus 56 -~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~~ 87 (255)
+.++.|..+.. .+.+|+||||.-...+
T Consensus 79 ~~ff~~L~~~~~-----p~~~vPG~~Dap~~~~ 106 (255)
T PF14582_consen 79 DKFFRILGELGV-----PVFVVPGNMDAPERFF 106 (255)
T ss_dssp HHHHHHHHCC-S-----EEEEE--TTS-SHHHH
T ss_pred HHHHHHHHhcCC-----cEEEecCCCCchHHHH
Confidence 23333433332 5899999999744433
No 75
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.90 E-value=3.6e-05 Score=68.92 Aligned_cols=72 Identities=21% Similarity=0.383 Sum_probs=44.8
Q ss_pred EEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-H----------HHH---HHHHhCCCCCCCCc
Q 025290 7 VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-R----------EVI---DFLISLPTKYPNQK 72 (255)
Q Consensus 7 i~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-~----------~vl---~~l~~l~~~~p~~~ 72 (255)
|+|+||+||+++.+-+.++....... .+.|.+|++||+-..+..+ . ... +++.... +.| ..
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~---~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~-~~p-~~ 75 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEG---TKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEK-KAP-IL 75 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcC---CCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCc-cCC-ee
Confidence 58999999998888765555433211 1359999999996554332 1 112 2222222 233 23
Q ss_pred EEEECCCcccc
Q 025290 73 HVFLSGNHDLG 83 (255)
Q Consensus 73 v~~i~GNHE~~ 83 (255)
+++|.||||..
T Consensus 76 t~fi~GNHE~~ 86 (262)
T cd00844 76 TIFIGGNHEAS 86 (262)
T ss_pred EEEECCCCCCH
Confidence 79999999963
No 76
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.89 E-value=4.7e-05 Score=66.93 Aligned_cols=72 Identities=25% Similarity=0.349 Sum_probs=44.9
Q ss_pred EEEccCC--CC---HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC----------------hHHHHHHHHhCCC
Q 025290 8 CCIGDVH--GY---ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN----------------TREVIDFLISLPT 66 (255)
Q Consensus 8 ~vigDIH--G~---~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~----------------s~~vl~~l~~l~~ 66 (255)
++|||+| +. ...++.+++.+....+ .....+.+|++||++|.... -..+.+++.++..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~-~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~ 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDD-SASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcc-cccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc
Confidence 6899999 33 1334455555543211 00124899999999997310 1235566666664
Q ss_pred CCCCCcEEEECCCcccc
Q 025290 67 KYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 67 ~~p~~~v~~i~GNHE~~ 83 (255)
.. .++++.||||..
T Consensus 81 ~~---~v~~ipGNHD~~ 94 (243)
T cd07386 81 HI---KIIIIPGNHDAV 94 (243)
T ss_pred CC---eEEEeCCCCCcc
Confidence 43 599999999975
No 77
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.87 E-value=1.8e-05 Score=67.71 Aligned_cols=48 Identities=27% Similarity=0.479 Sum_probs=29.2
Q ss_pred CcEEEEeCCcCCCCC-------C-hHHHHHHHHhCCCCCCCCcEEEECCCcccchhhh
Q 025290 38 SAIIIFLGDYCDRGP-------N-TREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAF 87 (255)
Q Consensus 38 ~d~li~lGDlvDrG~-------~-s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~~ 87 (255)
.+.+|++||++|... . ..+.+..+..+... +.++++|.||||..+...
T Consensus 31 ~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~v~~v~GNHD~~~~~~ 86 (217)
T cd07398 31 ADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADR--GTRVYYVPGNHDFLLGDF 86 (217)
T ss_pred CCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHC--CCeEEEECCCchHHHHhH
Confidence 489999999998531 1 11221222222211 236999999999876554
No 78
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.77 E-value=3.4e-05 Score=67.60 Aligned_cols=70 Identities=26% Similarity=0.441 Sum_probs=45.7
Q ss_pred EEEccCC-C-CH----HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-----CC--hHHHHHHHHhCCCCCCCCcEE
Q 025290 8 CCIGDVH-G-YI----SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-----PN--TREVIDFLISLPTKYPNQKHV 74 (255)
Q Consensus 8 ~vigDIH-G-~~----~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-----~~--s~~vl~~l~~l~~~~p~~~v~ 74 (255)
++|||+| | .- +.|..+|+... + ..+.++++||++|.. +. -.+|...+..+..+ +.+++
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a---~----~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~--G~~v~ 71 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA---A----QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARK--GTRVY 71 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc---c----cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhc--CCeEE
Confidence 4799999 3 23 33344444332 1 348999999999743 11 24677777776665 45799
Q ss_pred EECCCcccchhh
Q 025290 75 FLSGNHDLGFAA 86 (255)
Q Consensus 75 ~i~GNHE~~~~~ 86 (255)
++.||||..+-+
T Consensus 72 ~i~GN~Dfll~~ 83 (237)
T COG2908 72 YIHGNHDFLLGK 83 (237)
T ss_pred EecCchHHHHHH
Confidence 999999954443
No 79
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.76 E-value=0.0001 Score=65.51 Aligned_cols=70 Identities=20% Similarity=0.193 Sum_probs=42.4
Q ss_pred EEEEccCCCCHH---H---H-HHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--------H---HHHHHHHhCCCCC
Q 025290 7 VCCIGDVHGYIS---K---L-QNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--------R---EVIDFLISLPTKY 68 (255)
Q Consensus 7 i~vigDIHG~~~---~---l-~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--------~---~vl~~l~~l~~~~ 68 (255)
++.|||+|-... . . ..+++.+.... .+.+|++||++|++... . +.++.+.......
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~------pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIK------PALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhC------CCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCC
Confidence 578999994211 1 2 33455554443 38999999999976521 1 2334333332211
Q ss_pred CCCcEEEECCCcccc
Q 025290 69 PNQKHVFLSGNHDLG 83 (255)
Q Consensus 69 p~~~v~~i~GNHE~~ 83 (255)
+ ..++.++||||..
T Consensus 76 ~-~p~~~v~GNHD~~ 89 (256)
T cd07401 76 K-EKWFDIRGNHDLF 89 (256)
T ss_pred c-ceEEEeCCCCCcC
Confidence 1 2589999999985
No 80
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=97.73 E-value=0.0001 Score=64.77 Aligned_cols=67 Identities=22% Similarity=0.399 Sum_probs=49.1
Q ss_pred eEEEEccCCCCH---------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-----HHHHHHHHhCCCCCCCC
Q 025290 6 RVCCIGDVHGYI---------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-----REVIDFLISLPTKYPNQ 71 (255)
Q Consensus 6 ri~vigDIHG~~---------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-----~~vl~~l~~l~~~~p~~ 71 (255)
+|+.+||+||.+ ..+..++++++...+ ...++..||+++..+.+ ..+++.+..+..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~-----~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g~----- 71 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENE-----NTLLLDAGDNFDGSPPSTATKGEANIELMNALGY----- 71 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCC-----CeEEEeCCccCCCccchhccCCcHHHHHHHhcCC-----
Confidence 789999999776 677788888766532 34778899999987754 367777777653
Q ss_pred cEEEECCCcccc
Q 025290 72 KHVFLSGNHDLG 83 (255)
Q Consensus 72 ~v~~i~GNHE~~ 83 (255)
.+++.||||..
T Consensus 72 -d~~~~GNHe~d 82 (252)
T cd00845 72 -DAVTIGNHEFD 82 (252)
T ss_pred -CEEeecccccc
Confidence 24567999964
No 81
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.72 E-value=4.4e-05 Score=68.41 Aligned_cols=75 Identities=21% Similarity=0.377 Sum_probs=45.2
Q ss_pred CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-----HHHHHHHHhCCCCCCCCcEEEEC
Q 025290 3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-----REVIDFLISLPTKYPNQKHVFLS 77 (255)
Q Consensus 3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-----~~vl~~l~~l~~~~p~~~v~~i~ 77 (255)
.+.|++++||.|.....-..+++.+..... ..+.++++||+++.+... ...++.+..+....| ++.++
T Consensus 3 ~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~----~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P---~~~~~ 75 (294)
T cd00839 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELG----NYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP---YMVTP 75 (294)
T ss_pred CcEEEEEEEECCCCCCCcHHHHHHHHhccC----CccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC---cEEcC
Confidence 467999999999632222334433332111 248999999999644322 233444444433344 88999
Q ss_pred CCcccch
Q 025290 78 GNHDLGF 84 (255)
Q Consensus 78 GNHE~~~ 84 (255)
||||...
T Consensus 76 GNHD~~~ 82 (294)
T cd00839 76 GNHEADY 82 (294)
T ss_pred ccccccc
Confidence 9999753
No 82
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.41 E-value=0.00025 Score=60.80 Aligned_cols=46 Identities=30% Similarity=0.589 Sum_probs=33.4
Q ss_pred CcEEEEeCCcCCCCCCh--HHHHHHHHhCCCC---CCCCcEEEECCCcccc
Q 025290 38 SAIIIFLGDYCDRGPNT--REVIDFLISLPTK---YPNQKHVFLSGNHDLG 83 (255)
Q Consensus 38 ~d~li~lGDlvDrG~~s--~~vl~~l~~l~~~---~p~~~v~~i~GNHE~~ 83 (255)
.|.+||+||++|.|+.+ .+..+.+.++... -++..+++|.||||.-
T Consensus 43 PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 43 PDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 48999999999999854 3456655555432 2345789999999964
No 83
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=97.38 E-value=0.00041 Score=62.08 Aligned_cols=66 Identities=21% Similarity=0.351 Sum_probs=45.2
Q ss_pred eEEEEccCCCCH----------------HHHHHHHHHhhhccCCCCCCCcEEEE-eCCcCCCCCC-----------hHHH
Q 025290 6 RVCCIGDVHGYI----------------SKLQNLWKNLETHIGPSDFNSAIIIF-LGDYCDRGPN-----------TREV 57 (255)
Q Consensus 6 ri~vigDIHG~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~-lGDlvDrG~~-----------s~~v 57 (255)
+|+.++|+||.+ ..+..+++.++...+ +.+++ .||+++..+. ...+
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~------~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~ 75 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENP------NTLLIDNGDTIQGSPLADYYAKIEDGDPHPM 75 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCC------CeEEEeCCccCCccHHHHHhhhcccCCCChH
Confidence 689999999986 446677777765432 45554 8999986652 2346
Q ss_pred HHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 58 IDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 58 l~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
++.+..+.. . ++..||||..
T Consensus 76 ~~~ln~~g~-----d-~~~lGNHe~d 95 (277)
T cd07410 76 IAAMNALGY-----D-AGTLGNHEFN 95 (277)
T ss_pred HHHHHhcCC-----C-EEeecccCcc
Confidence 777777653 2 4567999964
No 84
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.33 E-value=0.00044 Score=57.91 Aligned_cols=47 Identities=26% Similarity=0.516 Sum_probs=30.4
Q ss_pred CcEEEEeCCcCCCCCCh-----HHHHHHHHhCCCCCC----CCcEEEECCCcccch
Q 025290 38 SAIIIFLGDYCDRGPNT-----REVIDFLISLPTKYP----NQKHVFLSGNHDLGF 84 (255)
Q Consensus 38 ~d~li~lGDlvDrG~~s-----~~vl~~l~~l~~~~p----~~~v~~i~GNHE~~~ 84 (255)
.+.+|++||++|.+... .+.++.+.++....+ +..+++|+||||...
T Consensus 46 pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 46 PDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred CCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 48999999999987642 123444434321110 236999999999864
No 85
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=97.21 E-value=0.00018 Score=62.44 Aligned_cols=117 Identities=18% Similarity=0.290 Sum_probs=83.3
Q ss_pred CcEEEECCCc--ccchhhhh----cCCCCCCCCCcccccccccccchhhcccc---cCCCcchhhccccccccccceecc
Q 025290 71 QKHVFLSGNH--DLGFAAFV----GVLPEPGGGLGFKEGWKQYEQNEEREGWF---KGDGYEKMHLQGRRWGGKITVKFN 141 (255)
Q Consensus 71 ~~v~~i~GNH--E~~~~~~~----~~~~~~~~~~~~~~~w~~~~~~~~~~~w~---~~~~~~~~~~~~r~~gg~~~~~~~ 141 (255)
..+.||-|-= |...++.+ +...-|.+|.+++.+| ++|++.+.|. ||.|| .+|.+++++|+
T Consensus 157 ~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmW---SDPedve~W~vSpRGAGw--------lFGskVt~eF~ 225 (306)
T KOG0373|consen 157 EKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMW---SDPEDVETWAVSPRGAGW--------LFGSKVTTEFN 225 (306)
T ss_pred CcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceec---cChhhhhhheeCCCCcce--------eechhhhHHHH
Confidence 4688887765 44444322 2344588899999999 7899999997 66676 69999999999
Q ss_pred cccCCcccCcccCcchhhhhcCCCcChHHHHhcCCHHHHHHHhcCcceEE-ecCeeeecCCCc-cccCeEEEeeeccCCC
Q 025290 142 AAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHE-EDEVCVETNDGI-KHCKLIAVHAGLERGK 219 (255)
Q Consensus 142 ~~~~~~~~~~~~~~~~tl~sy~~~~~~~~~~~~~~~~~~~~l~~LP~~~~-~~~~~~~~~~~~-~~~~~~~VHAGi~p~~ 219 (255)
..+++.+. .++|.-.-+++...+. .+.+||+|+||| +||+.++. =+.-+.
T Consensus 226 ~iN~L~Li--------------------------cRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAs--i~~~d~ 277 (306)
T KOG0373|consen 226 HINNLNLI--------------------------CRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVAS--IMSFDD 277 (306)
T ss_pred hccchHHH--------------------------HhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeee--EEEecc
Confidence 88875433 4567777777777765 447899999999 99988752 222334
Q ss_pred ChHHHHH
Q 025290 220 KVGEQLE 226 (255)
Q Consensus 220 ~l~~q~~ 226 (255)
.++.+..
T Consensus 278 ~~~r~~k 284 (306)
T KOG0373|consen 278 NLERETK 284 (306)
T ss_pred cCCccce
Confidence 4454444
No 86
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.20 E-value=0.0014 Score=53.87 Aligned_cols=68 Identities=22% Similarity=0.386 Sum_probs=47.3
Q ss_pred EEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290 8 CCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHD 81 (255)
Q Consensus 8 ~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE 81 (255)
+|+||+||+++.+-+-++.+..... +-|.+|++||+..-.....+.-.+... .++.| ...+++-|||+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~g----pFd~~ic~Gdff~~~~~~~~~~~y~~g-~~~~p-ipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKG----PFDALLCVGDFFGDDEDDEELEAYKDG-SKKVP-IPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccC----CeeEEEEecCccCCccchhhHHHHhcC-CccCC-CCEEEECCCCC
Confidence 4899999998887666666543222 469999999999765555444444443 33344 35899999998
No 87
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=97.15 E-value=8.8e-05 Score=65.24 Aligned_cols=104 Identities=22% Similarity=0.379 Sum_probs=79.7
Q ss_pred CCcEEEECCCcc--cchhhhh----cCCCCCCCCCcccccccccccchhhcccc---cCCCcchhhccccccccccceec
Q 025290 70 NQKHVFLSGNHD--LGFAAFV----GVLPEPGGGLGFKEGWKQYEQNEEREGWF---KGDGYEKMHLQGRRWGGKITVKF 140 (255)
Q Consensus 70 ~~~v~~i~GNHE--~~~~~~~----~~~~~~~~~~~~~~~w~~~~~~~~~~~w~---~~~~~~~~~~~~r~~gg~~~~~~ 140 (255)
++++.||-|-=- .+-++.+ +..+.|+++.+++.+| ++|++...|- ||.|| .||+++...|
T Consensus 153 d~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllW---SDPee~~g~~~SPRGaGy--------lFG~dvv~~F 221 (303)
T KOG0372|consen 153 DGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLW---SDPEEGPGWGLSPRGAGY--------LFGEDVVESF 221 (303)
T ss_pred cCcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheec---cCcccCCCcccCCCCccc--------cccHHHHHHH
Confidence 357899877653 2222222 3355688999999999 7888888896 67776 7999988888
Q ss_pred ccccCCcccCcccCcchhhhhcCCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCc-cccCeEE
Q 025290 141 NAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGI-KHCKLIA 210 (255)
Q Consensus 141 ~~~~~~~~~~~~~~~~~tl~sy~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~-~~~~~~~ 210 (255)
+..++.++ +.++|.-.++++...+....+||+++||| ++|+.++
T Consensus 222 ~~~N~~~~--------------------------I~RaHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~A 266 (303)
T KOG0372|consen 222 LEANGLSL--------------------------ICRAHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVA 266 (303)
T ss_pred HHhCChHH--------------------------HHHHHHHHHhhHHHhcCCceEEEecCCchhhhcCChH
Confidence 88776542 34678888899988888889999999999 8888775
No 88
>PLN02533 probable purple acid phosphatase
Probab=97.11 E-value=0.00097 Score=63.74 Aligned_cols=70 Identities=17% Similarity=0.249 Sum_probs=44.6
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh---HHHHHHHHhCCCCCCCCcEEEECCCc
Q 025290 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT---REVIDFLISLPTKYPNQKHVFLSGNH 80 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s---~~vl~~l~~l~~~~p~~~v~~i~GNH 80 (255)
+.+++++||+|-. .....+++.+.... .|.++++||+++.+... .+..+.+..+....| ++.++|||
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~------pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P---~m~~~GNH 208 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWD------YDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP---WMVTHGNH 208 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcC------CCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc---eEEeCccc
Confidence 4689999999632 22234555554432 38999999999754322 123344444444444 88999999
Q ss_pred ccc
Q 025290 81 DLG 83 (255)
Q Consensus 81 E~~ 83 (255)
|..
T Consensus 209 E~~ 211 (427)
T PLN02533 209 ELE 211 (427)
T ss_pred ccc
Confidence 975
No 89
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=97.02 E-value=0.0011 Score=56.13 Aligned_cols=72 Identities=24% Similarity=0.432 Sum_probs=48.6
Q ss_pred CeEEEEccCCCCH--------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcC--CCCCChHHHHHHHHhCCCCC
Q 025290 5 RRVCCIGDVHGYI--------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYC--DRGPNTREVIDFLISLPTKY 68 (255)
Q Consensus 5 ~ri~vigDIHG~~--------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlv--DrG~~s~~vl~~l~~l~~~~ 68 (255)
|||++|+|+|=.+ ..-+++-+.+..... +.|.+++-||+- -|=++..+-++++-.|.-
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k~W~~~v~----~eDiVllpGDiSWaM~l~ea~~Dl~~i~~LPG-- 74 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKKHWRSKVS----PEDIVLLPGDISWAMRLEEAEEDLRFIGDLPG-- 74 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHHHHHhcCC----hhhEEEecccchhheechhhhhhhhhhhcCCC--
Confidence 7899999999111 112334444433222 358999999994 445667778888888763
Q ss_pred CCCcEEEECCCcccchh
Q 025290 69 PNQKHVFLSGNHDLGFA 85 (255)
Q Consensus 69 p~~~v~~i~GNHE~~~~ 85 (255)
.-+.+|||||++.-
T Consensus 75 ---~K~m~rGNHDYWw~ 88 (230)
T COG1768 75 ---TKYMIRGNHDYWWS 88 (230)
T ss_pred ---cEEEEecCCccccc
Confidence 46789999998754
No 90
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=97.02 E-value=0.0026 Score=55.93 Aligned_cols=75 Identities=24% Similarity=0.341 Sum_probs=46.3
Q ss_pred CCeEEEEccCCCCHHH----------------HHHHHH-HhhhccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHHHH
Q 025290 4 PRRVCCIGDVHGYISK----------------LQNLWK-NLETHIGPSDFNSAIIIFLGDYCDRGPN-----TREVIDFL 61 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~----------------l~~lL~-~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~~l 61 (255)
..+++||+|+|=.+.. +.+.++ .+... ..+.+|++||+-.-.+. ..++-.++
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~------~p~~lIilGD~KH~~~~~~~~e~~~~~~f~ 92 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERY------GPKRLIILGDLKHEFGKSLRQEKEEVREFL 92 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhc------CCCEEEEcCccccccCccccccHHHHHHHH
Confidence 4688999999944332 223333 22222 24899999999754332 24455555
Q ss_pred HhCCCCCCCCcEEEECCCcccchhhhh
Q 025290 62 ISLPTKYPNQKHVFLSGNHDLGFAAFV 88 (255)
Q Consensus 62 ~~l~~~~p~~~v~~i~GNHE~~~~~~~ 88 (255)
..+... .+++|+||||...-..+
T Consensus 93 ~~~~~~----evi~i~GNHD~~i~~~~ 115 (235)
T COG1407 93 ELLDER----EVIIIRGNHDNGIEEIL 115 (235)
T ss_pred HHhccC----cEEEEeccCCCcccccc
Confidence 544433 48999999997655543
No 91
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=96.99 E-value=0.0022 Score=56.87 Aligned_cols=66 Identities=20% Similarity=0.359 Sum_probs=46.7
Q ss_pred eEEEEccCCCC----------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-----HHHHHHHHhCCCCCCC
Q 025290 6 RVCCIGDVHGY----------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-----REVIDFLISLPTKYPN 70 (255)
Q Consensus 6 ri~vigDIHG~----------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-----~~vl~~l~~l~~~~p~ 70 (255)
+|+.++|+||. +..+..++++++.. + ...++..||+++..+.+ ..+++.+..+..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~-~-----~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~---- 71 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL-D-----NDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY---- 71 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhc-C-----CEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----
Confidence 78999999986 45566777776543 2 47889999999876532 456677766653
Q ss_pred CcEEEECCCcccc
Q 025290 71 QKHVFLSGNHDLG 83 (255)
Q Consensus 71 ~~v~~i~GNHE~~ 83 (255)
.+ ...||||..
T Consensus 72 -d~-~~~GNHefd 82 (257)
T cd07408 72 -DA-VTPGNHEFD 82 (257)
T ss_pred -cE-Ecccccccc
Confidence 24 467999953
No 92
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.87 E-value=0.002 Score=57.50 Aligned_cols=45 Identities=27% Similarity=0.388 Sum_probs=27.9
Q ss_pred CcEEEEeCCcCCCCCChH-----HHHHHHHhC-CCCCCCCcEEEECCCccc
Q 025290 38 SAIIIFLGDYCDRGPNTR-----EVIDFLISL-PTKYPNQKHVFLSGNHDL 82 (255)
Q Consensus 38 ~d~li~lGDlvDrG~~s~-----~vl~~l~~l-~~~~p~~~v~~i~GNHE~ 82 (255)
.|.+|++||++|.|.... +-++.+.++ ........+++|+||||.
T Consensus 46 PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDi 96 (257)
T cd08163 46 PDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDI 96 (257)
T ss_pred CCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCccc
Confidence 389999999999987521 122222222 211001248999999996
No 93
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=96.77 E-value=0.0035 Score=56.67 Aligned_cols=67 Identities=19% Similarity=0.359 Sum_probs=47.4
Q ss_pred eEEEEccCCCCH--------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-h-----HHHHHHHHhCC
Q 025290 6 RVCCIGDVHGYI--------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-T-----REVIDFLISLP 65 (255)
Q Consensus 6 ri~vigDIHG~~--------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s-----~~vl~~l~~l~ 65 (255)
+|+.++|+||++ ..+..+++.++...+ ...++..||++...+. + ..+++.+..+.
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~-----~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g 76 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNP-----NSLFVSAGDLIGASPFESALLQDEPTIEALNAMG 76 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCC-----CeEEEeCCcccccccchhhcccCCcHHHHHHhhC
Confidence 689999999874 446677777765432 4688889999986654 2 35677777776
Q ss_pred CCCCCCcEEEECCCcccc
Q 025290 66 TKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 66 ~~~p~~~v~~i~GNHE~~ 83 (255)
.. ....||||+-
T Consensus 77 ~D------a~t~GNHefd 88 (288)
T cd07412 77 VD------ASAVGNHEFD 88 (288)
T ss_pred Ce------eeeecccccc
Confidence 42 3567999954
No 94
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.70 E-value=0.0058 Score=52.36 Aligned_cols=67 Identities=18% Similarity=0.260 Sum_probs=40.6
Q ss_pred cCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-HHHHHHHHhCCCCC--------------------CC
Q 025290 12 DVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-REVIDFLISLPTKY--------------------PN 70 (255)
Q Consensus 12 DIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-~~vl~~l~~l~~~~--------------------p~ 70 (255)
|++|+-.-|.+..+.+..... .+.++||||++|.+--+ .+-.+.+.++...+ .+
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~-----Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~ 98 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLK-----PDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGK 98 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcC-----CCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCC
Confidence 556666666666666554333 48999999999987433 22223332222111 02
Q ss_pred CcEEEECCCcccc
Q 025290 71 QKHVFLSGNHDLG 83 (255)
Q Consensus 71 ~~v~~i~GNHE~~ 83 (255)
..+++|+||||.-
T Consensus 99 i~~i~V~GNHDIG 111 (193)
T cd08164 99 TPLINIAGNHDVG 111 (193)
T ss_pred ceEEEECCcccCC
Confidence 4678999999974
No 95
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=96.68 E-value=0.0061 Score=54.12 Aligned_cols=69 Identities=23% Similarity=0.308 Sum_probs=38.9
Q ss_pred eEEEEccCCCC--H--HHHHHHH-HHhhhccCCCCCCCcEEEEeCCcC-CCCCCh------HHHHHHHHh-CCCCCCCCc
Q 025290 6 RVCCIGDVHGY--I--SKLQNLW-KNLETHIGPSDFNSAIIIFLGDYC-DRGPNT------REVIDFLIS-LPTKYPNQK 72 (255)
Q Consensus 6 ri~vigDIHG~--~--~~l~~lL-~~~~~~~~~~~~~~d~li~lGDlv-DrG~~s------~~vl~~l~~-l~~~~p~~~ 72 (255)
+++++||.=.. . ..+...+ +.+... ..+.+|++||++ +.|..+ .+.++.+.. +... ..
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~------~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~---~P 72 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAEL------GPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQ---VP 72 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhc------CCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhc---CC
Confidence 68999997653 1 2333333 333222 248899999997 455322 122222222 2112 35
Q ss_pred EEEECCCcccc
Q 025290 73 HVFLSGNHDLG 83 (255)
Q Consensus 73 v~~i~GNHE~~ 83 (255)
++.++||||..
T Consensus 73 ~~~v~GNHD~~ 83 (277)
T cd07378 73 WYLVLGNHDYS 83 (277)
T ss_pred eEEecCCcccC
Confidence 99999999965
No 96
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=96.62 E-value=0.0063 Score=54.06 Aligned_cols=67 Identities=21% Similarity=0.347 Sum_probs=49.0
Q ss_pred eEEEEccCC----------CCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHHHHHhCCCCCCC
Q 025290 6 RVCCIGDVH----------GYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-----TREVIDFLISLPTKYPN 70 (255)
Q Consensus 6 ri~vigDIH----------G~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~~l~~l~~~~p~ 70 (255)
+|+.+.|+| |.+..+..++++.+...+ ...++..||+++..+. ...+++.+..+..
T Consensus 2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~-----~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~---- 72 (257)
T cd07406 2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENP-----NTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV---- 72 (257)
T ss_pred eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCC-----CEEEEECCCccCCccchhhcCCccHHHHHHhcCC----
Confidence 688899999 346778888888765432 3588889999987653 2567777777753
Q ss_pred CcEEEECCCcccc
Q 025290 71 QKHVFLSGNHDLG 83 (255)
Q Consensus 71 ~~v~~i~GNHE~~ 83 (255)
-+.+.||||..
T Consensus 73 --d~~~~GNHefd 83 (257)
T cd07406 73 --DLACFGNHEFD 83 (257)
T ss_pred --cEEeecccccc
Confidence 25678999963
No 97
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=96.59 E-value=0.0083 Score=53.89 Aligned_cols=68 Identities=24% Similarity=0.315 Sum_probs=54.2
Q ss_pred CeEEEEccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-CChHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290 5 RRVCCIGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-PNTREVIDFLISLPTKYPNQKHVFLSGNHD 81 (255)
Q Consensus 5 ~ri~vigDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE 81 (255)
|||++||||=|. ...+...|..++.+.. .|.+|..||....| -.+.++.+.|.++.. .++.+ |||+
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~-----~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv-----DviT~-GNH~ 69 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQ-----ADLVIANGENTTHGKGLTLKIYEFLKQSGV-----NYITM-GNHT 69 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCC-----CCEEEEcCcccCCCCCCCHHHHHHHHhcCC-----CEEEc-cchh
Confidence 789999999999 6777888888876543 58999999999766 357899999998875 35544 9997
Q ss_pred cc
Q 025290 82 LG 83 (255)
Q Consensus 82 ~~ 83 (255)
+-
T Consensus 70 ~D 71 (266)
T TIGR00282 70 WF 71 (266)
T ss_pred cc
Confidence 54
No 98
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=96.53 E-value=0.0084 Score=53.35 Aligned_cols=65 Identities=18% Similarity=0.339 Sum_probs=43.1
Q ss_pred eEEEEccCCCCH----------------------HHHHHHHHHhhhc-cCCCCCCCcEE-EEeCCcCCCCCCh-----HH
Q 025290 6 RVCCIGDVHGYI----------------------SKLQNLWKNLETH-IGPSDFNSAII-IFLGDYCDRGPNT-----RE 56 (255)
Q Consensus 6 ri~vigDIHG~~----------------------~~l~~lL~~~~~~-~~~~~~~~d~l-i~lGDlvDrG~~s-----~~ 56 (255)
.|+.++|+||.+ ..+..++++++.. .+ +.+ +..||+++..+.+ ..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~------~~l~l~~GD~~~gs~~~~~~~g~~ 75 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNP------NTLLLDGGDTWQGSGEALYTRGQA 75 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCC------CeEEEeCCCccCCChHHhhcCChh
Confidence 578899999963 4456677776654 22 445 5699999876533 35
Q ss_pred HHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 57 VIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 57 vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
+++.+..+.. -.+. ||||..
T Consensus 76 ~~~~l~~~g~------da~~-GNHefd 95 (264)
T cd07411 76 MVDALNALGV------DAMV-GHWEFT 95 (264)
T ss_pred HHHHHHhhCC------eEEe-cccccc
Confidence 6777777553 2334 999964
No 99
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=96.44 E-value=0.0025 Score=62.75 Aligned_cols=46 Identities=26% Similarity=0.442 Sum_probs=39.3
Q ss_pred CcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccchhhhhc
Q 025290 38 SAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAFVG 89 (255)
Q Consensus 38 ~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~~~~ 89 (255)
-|++-++||+.||||.+-.+++.|+... ++=+--||||..++....
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~h------svDIQWGNHDIlWMGAa~ 230 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNYH------SVDIQWGNHDILWMGAAA 230 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcCC------CccccccchHHHHHHHhh
Confidence 4899999999999999999999999765 467789999987766543
No 100
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=96.40 E-value=0.0091 Score=56.47 Aligned_cols=46 Identities=30% Similarity=0.597 Sum_probs=31.2
Q ss_pred CcEEEEeCCcCCCCCCh--HHHHHHHHhCCCCCC---CCcEEEECCCcccc
Q 025290 38 SAIIIFLGDYCDRGPNT--REVIDFLISLPTKYP---NQKHVFLSGNHDLG 83 (255)
Q Consensus 38 ~d~li~lGDlvDrG~~s--~~vl~~l~~l~~~~p---~~~v~~i~GNHE~~ 83 (255)
.|.++||||++|.|... .|--+...++++-++ +..+..|.||||.-
T Consensus 94 PdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 94 PDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIG 144 (410)
T ss_pred CCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCccccc
Confidence 48999999999988743 344444444433222 34688999999953
No 101
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=96.20 E-value=0.0096 Score=53.61 Aligned_cols=73 Identities=16% Similarity=0.228 Sum_probs=45.5
Q ss_pred EccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH--H------HHHHHHhCCCCCCCCcEEEECCC
Q 025290 10 IGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR--E------VIDFLISLPTKYPNQKHVFLSGN 79 (255)
Q Consensus 10 igDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~--~------vl~~l~~l~~~~p~~~v~~i~GN 79 (255)
.|+-.++ ...++.+++.+..... ..+.+|++||+++.+.... + .-.+...++...|+..++.+.||
T Consensus 43 ~G~~~CD~p~~l~~s~l~~i~~~~~----~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 43 WGDYGCDSPWRLVESALEAIKKNHP----KPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CcCcCCCCcHHHHHHHHHHHHHhCC----CCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 4555433 3566778888776522 3489999999998775321 1 12222223333455579999999
Q ss_pred cccchhh
Q 025290 80 HDLGFAA 86 (255)
Q Consensus 80 HE~~~~~ 86 (255)
||..-..
T Consensus 119 HD~~p~~ 125 (296)
T cd00842 119 HDSYPVN 125 (296)
T ss_pred CCCCccc
Confidence 9976443
No 102
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.17 E-value=0.013 Score=62.61 Aligned_cols=66 Identities=18% Similarity=0.232 Sum_probs=47.1
Q ss_pred CeEEEEccCCCC---HHHHHHHHHHhhhccCCCCCCCcEEEE-eCCcCCCCCCh-----HHHHHHHHhCCCCCCCCcEEE
Q 025290 5 RRVCCIGDVHGY---ISKLQNLWKNLETHIGPSDFNSAIIIF-LGDYCDRGPNT-----REVIDFLISLPTKYPNQKHVF 75 (255)
Q Consensus 5 ~ri~vigDIHG~---~~~l~~lL~~~~~~~~~~~~~~d~li~-lGDlvDrG~~s-----~~vl~~l~~l~~~~p~~~v~~ 75 (255)
.+|+.++|+||. +..+..+++.++...+ +.+++ .||+++..+.+ ..+++.+..+... ..
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~------~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~d------~~ 728 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENP------NTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGYD------AS 728 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCC------CeEEEecCCCCCCcchhhhcCChHHHHHHhCcCCC------EE
Confidence 589999999987 4566667777665432 44544 99999877643 3577777776542 46
Q ss_pred ECCCccc
Q 025290 76 LSGNHDL 82 (255)
Q Consensus 76 i~GNHE~ 82 (255)
+.||||+
T Consensus 729 ~~GNHEf 735 (1163)
T PRK09419 729 TFGNHEF 735 (1163)
T ss_pred Eeccccc
Confidence 8999995
No 103
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=96.17 E-value=0.02 Score=51.47 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=45.3
Q ss_pred eEEEEccCCCC---------------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHH
Q 025290 6 RVCCIGDVHGY---------------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-----TREVID 59 (255)
Q Consensus 6 ri~vigDIHG~---------------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~ 59 (255)
+|+.++|+||. +..+..+++.++...+ ...++..||++...+. ...+++
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~-----~~l~ld~GD~~~gs~~~~~~~g~~~~~ 76 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENP-----NVLFLNAGDAFQGTLWYTLYKGNADAE 76 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCC-----CEEEEeCCCCCCCcchhhhcCChHHHH
Confidence 68999999976 4556667777665422 3456669999987653 355677
Q ss_pred HHHhCCCCCCCCcEEEECCCcccc
Q 025290 60 FLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 60 ~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
.+..+.. .+ +..||||..
T Consensus 77 ~ln~~g~-----D~-~~lGNHefd 94 (281)
T cd07409 77 FMNLLGY-----DA-MTLGNHEFD 94 (281)
T ss_pred HHHhcCC-----CE-EEecccccc
Confidence 7776654 24 456999964
No 104
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.10 E-value=0.024 Score=50.61 Aligned_cols=68 Identities=21% Similarity=0.275 Sum_probs=51.8
Q ss_pred eEEEEccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-CChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290 6 RVCCIGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-PNTREVIDFLISLPTKYPNQKHVFLSGNHDL 82 (255)
Q Consensus 6 ri~vigDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~ 82 (255)
||++||||=|. ...+...|..++.+.. .|.+|..||..-.| ..+.++.+.+..+.. .+.. .|||++
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~-----~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~-----D~iT-lGNH~f 69 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYK-----IDFVIANGENAAGGKGITPKIAKELLSAGV-----DVIT-MGNHTW 69 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCC-----CCEEEECCccccCCCCCCHHHHHHHHhcCC-----CEEE-eccccc
Confidence 68999999998 4566777877765432 58899999998766 467899999999875 3544 499985
Q ss_pred ch
Q 025290 83 GF 84 (255)
Q Consensus 83 ~~ 84 (255)
-.
T Consensus 70 D~ 71 (255)
T cd07382 70 DK 71 (255)
T ss_pred Cc
Confidence 43
No 105
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=95.66 E-value=0.036 Score=50.84 Aligned_cols=70 Identities=20% Similarity=0.315 Sum_probs=46.9
Q ss_pred eEEEEccCCCCH------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-------------hHHHHHHHHhCCC
Q 025290 6 RVCCIGDVHGYI------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-------------TREVIDFLISLPT 66 (255)
Q Consensus 6 ri~vigDIHG~~------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-------------s~~vl~~l~~l~~ 66 (255)
+|+.+.|+||++ ..+..+++.++....+ ..++..++..||.+..++. ...+++++..+..
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~-~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~ 80 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAA-EYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV 80 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhc-cCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC
Confidence 588999999984 4555566666543100 0124678889999986553 3466778877765
Q ss_pred CCCCCcEEEECCCccc
Q 025290 67 KYPNQKHVFLSGNHDL 82 (255)
Q Consensus 67 ~~p~~~v~~i~GNHE~ 82 (255)
. ....||||+
T Consensus 81 D------a~tlGNHEF 90 (313)
T cd08162 81 Q------AIALGNHEF 90 (313)
T ss_pred c------EEecccccc
Confidence 3 467999995
No 106
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=95.37 E-value=0.048 Score=50.43 Aligned_cols=43 Identities=21% Similarity=0.288 Sum_probs=26.7
Q ss_pred CcEEEEeCCcCCCCCChHHHHHHHHhC---CCCCCCCcEEEECCCccc
Q 025290 38 SAIIIFLGDYCDRGPNTREVIDFLISL---PTKYPNQKHVFLSGNHDL 82 (255)
Q Consensus 38 ~d~li~lGDlvDrG~~s~~vl~~l~~l---~~~~p~~~v~~i~GNHE~ 82 (255)
.|.+||+||.|+. .........+++. .+.+ +..-..+.||||.
T Consensus 101 PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~-~IPwA~~lGNHDd 146 (379)
T KOG1432|consen 101 PDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR-KIPWAAVLGNHDD 146 (379)
T ss_pred CCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc-CCCeEEEeccccc
Confidence 4999999999995 4443333333322 1111 2346789999985
No 107
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=94.98 E-value=0.068 Score=53.84 Aligned_cols=69 Identities=20% Similarity=0.260 Sum_probs=49.0
Q ss_pred CCeEEEEccCCCCH----------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH------------
Q 025290 4 PRRVCCIGDVHGYI----------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR------------ 55 (255)
Q Consensus 4 ~~ri~vigDIHG~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~------------ 55 (255)
..+|+.++|+||++ ..+..++++++...+ +..++-.||++...|.+-
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~-----n~llvD~GD~~qGsp~~~~~~~~~~~~g~~ 99 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAK-----NSVLVDNGDLIQGSPLGDYMAAKGLKAGDV 99 (649)
T ss_pred eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCC-----CEEEEECCCcCCCchhhhhhhhccccCCCc
Confidence 46899999999985 345567777765432 467888999998666431
Q ss_pred -HHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 56 -EVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 56 -~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
.+++.+..+... ....||||+.
T Consensus 100 ~p~i~amN~lgyD------a~tlGNHEFd 122 (649)
T PRK09420 100 HPVYKAMNTLDYD------VGNLGNHEFN 122 (649)
T ss_pred chHHHHHHhcCCc------EEeccchhhh
Confidence 367777777653 4689999953
No 108
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=94.94 E-value=0.059 Score=48.77 Aligned_cols=73 Identities=15% Similarity=0.228 Sum_probs=44.2
Q ss_pred CCeEEEEccCCCCHH-------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-------hHHHHHHHHh
Q 025290 4 PRRVCCIGDVHGYIS-------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-------TREVIDFLIS 63 (255)
Q Consensus 4 ~~ri~vigDIHG~~~-------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-------s~~vl~~l~~ 63 (255)
..+|+.++|+||.+. .+.++++.++..... ..++..++-.||.+...+. ...+++++..
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~-~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~ 83 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQ-KGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRM 83 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHh-cCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHh
Confidence 457899999998753 223343333221000 0023456679999986543 2446777777
Q ss_pred CCCCCCCCcEEEECCCcccc
Q 025290 64 LPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 64 l~~~~p~~~v~~i~GNHE~~ 83 (255)
+... ....||||..
T Consensus 84 mgyD------a~tlGNHEFd 97 (282)
T cd07407 84 MPYD------LLTIGNHELY 97 (282)
T ss_pred cCCc------EEeecccccC
Confidence 7653 5789999984
No 109
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=94.90 E-value=0.084 Score=47.65 Aligned_cols=71 Identities=14% Similarity=0.198 Sum_probs=44.7
Q ss_pred eEEEEccCCCCH----------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHHHHHhCCCCCCC
Q 025290 6 RVCCIGDVHGYI----------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-----TREVIDFLISLPTKYPN 70 (255)
Q Consensus 6 ri~vigDIHG~~----------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~~l~~l~~~~p~ 70 (255)
+|+.++|+||.+ ..+..++++++..... ..++..++-.||++...+. ...+++.+..+...
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~-~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D--- 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAA-QGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD--- 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhc-cCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc---
Confidence 589999999974 3355677666543110 0124577789999964442 24566777777652
Q ss_pred CcEEEECCCcccc
Q 025290 71 QKHVFLSGNHDLG 83 (255)
Q Consensus 71 ~~v~~i~GNHE~~ 83 (255)
+ ...||||+-
T Consensus 78 --a-~~~GNHEfD 87 (285)
T cd07405 78 --A-MAVGNHEFD 87 (285)
T ss_pred --E-Eeecccccc
Confidence 3 455999954
No 110
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=94.88 E-value=0.071 Score=53.49 Aligned_cols=68 Identities=21% Similarity=0.273 Sum_probs=47.2
Q ss_pred CeEEEEccCCCCHH----------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-------------H
Q 025290 5 RRVCCIGDVHGYIS----------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-------------R 55 (255)
Q Consensus 5 ~ri~vigDIHG~~~----------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-------------~ 55 (255)
.+|+.++|+||++. .+..++++++...+ +..++-.||++...|.+ .
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~-----n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~ 77 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVK-----NSVLVDNGDLIQGSPLGDYMAAQGLKAGQMH 77 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCC-----CeEEEECCCcCCCccchhhhhhccccCCCcC
Confidence 58999999999853 45556776654332 46788899999866533 2
Q ss_pred HHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 56 EVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 56 ~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
.+++.+..+..- ....||||+.
T Consensus 78 p~~~~mN~lgyD------a~tlGNHEFd 99 (626)
T TIGR01390 78 PVYKAMNLLKYD------VGNLGNHEFN 99 (626)
T ss_pred hHHHHHhhcCcc------EEeccccccc
Confidence 366777776642 4689999953
No 111
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=94.82 E-value=0.023 Score=54.35 Aligned_cols=46 Identities=28% Similarity=0.447 Sum_probs=38.6
Q ss_pred CcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccchhhhhc
Q 025290 38 SAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAFVG 89 (255)
Q Consensus 38 ~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~~~~ 89 (255)
.|++-++||+.||||.+-.+++.|..+. .+-+--||||..++..+.
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh------svDiQWGNHDilWmgA~s 236 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH------SVDIQWGNHDILWMGAAS 236 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc------cccccccCcceEEeeccc
Confidence 4889999999999999999999999876 356779999987665543
No 112
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=94.53 E-value=0.13 Score=50.86 Aligned_cols=67 Identities=19% Similarity=0.247 Sum_probs=45.8
Q ss_pred eEEEEccCCCCHH---------------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-----HHHHH
Q 025290 6 RVCCIGDVHGYIS---------------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-----REVID 59 (255)
Q Consensus 6 ri~vigDIHG~~~---------------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-----~~vl~ 59 (255)
.|+.+.|+||++. .+..++++++...+ +..++..||.+...+.+ ...++
T Consensus 2 tILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~-----n~l~ldaGD~~~gs~~~~~~~g~~~i~ 76 (550)
T TIGR01530 2 SIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESK-----NALVLHAGDAIIGTLYFTLFGGRADAA 76 (550)
T ss_pred EEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCC-----CeEEEECCCCCCCccchhhcCCHHHHH
Confidence 5889999998743 34455666654432 46788899999765533 45677
Q ss_pred HHHhCCCCCCCCcEEEECCCcccc
Q 025290 60 FLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 60 ~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
.+..+... ....||||+-
T Consensus 77 ~~N~~g~D------a~~lGNHEFd 94 (550)
T TIGR01530 77 LMNAAGFD------FFTLGNHEFD 94 (550)
T ss_pred HHhccCCC------EEEecccccc
Confidence 77776642 5789999964
No 113
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=94.26 E-value=0.13 Score=53.13 Aligned_cols=68 Identities=19% Similarity=0.211 Sum_probs=47.3
Q ss_pred CeEEEEccCCCCHH----------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--------------
Q 025290 5 RRVCCIGDVHGYIS----------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-------------- 54 (255)
Q Consensus 5 ~ri~vigDIHG~~~----------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-------------- 54 (255)
.+|+.+.|+||++. .+..+++.++... ++..++-.||++...|.+
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~-----~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~ 190 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKEN-----PNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQ 190 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhC-----CCEEEEecCCCCCCCcccchhhhccccccCcc
Confidence 58999999999853 3444666665433 246788899999865432
Q ss_pred HHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 55 REVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 55 ~~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
..+++.+..+... ....||||+.
T Consensus 191 ~P~i~amN~LGyD------A~tLGNHEFD 213 (814)
T PRK11907 191 HPMYAALEALGFD------AGTLGNHEFN 213 (814)
T ss_pred hHHHHHHhccCCC------EEEechhhcc
Confidence 1367777777653 4789999953
No 114
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=94.19 E-value=0.1 Score=55.87 Aligned_cols=67 Identities=21% Similarity=0.301 Sum_probs=45.7
Q ss_pred CeEEEEccCCCCH----------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC--------------h
Q 025290 5 RRVCCIGDVHGYI----------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN--------------T 54 (255)
Q Consensus 5 ~ri~vigDIHG~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~--------------s 54 (255)
.+|+.++|+||++ ..+..+++.++...+ +..++-.||++...|. .
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~-----n~llld~GD~~qGs~l~~~~~~~~~~~~~~~ 116 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENP-----NTLLVDNGDLIQGNPLGEYAVKDNILFKNKT 116 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCC-----CeEEEeCCCccCCChhhhHHhhhccccCCCc
Confidence 5799999999975 445567777665432 3455559999986651 2
Q ss_pred HHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290 55 REVIDFLISLPTKYPNQKHVFLSGNHDL 82 (255)
Q Consensus 55 ~~vl~~l~~l~~~~p~~~v~~i~GNHE~ 82 (255)
..+++.+..+... ....||||+
T Consensus 117 ~~~i~~mN~lgyD------a~~lGNHEF 138 (1163)
T PRK09419 117 HPMIKAMNALGYD------AGTLGNHEF 138 (1163)
T ss_pred CHHHHHHhhcCcc------EEeeccccc
Confidence 3566777666542 467999996
No 115
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=94.19 E-value=0.11 Score=50.73 Aligned_cols=69 Identities=22% Similarity=0.405 Sum_probs=49.5
Q ss_pred CCeEEEEccCCCCHH---------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCC------ChHHHHHHHH
Q 025290 4 PRRVCCIGDVHGYIS---------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGP------NTREVIDFLI 62 (255)
Q Consensus 4 ~~ri~vigDIHG~~~---------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~------~s~~vl~~l~ 62 (255)
..+|+.+.|+||.+. ....++++++.... +..++-.||+++..+ .....++.+.
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~-----~~llld~GD~~~G~~l~~~~~~g~~~~~~mN 100 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENK-----NVLLLDAGDLIQGSPLSDYLTKGEPTVDLLN 100 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcC-----CeEEEeCCcccCCccccccccCCChHHHHHh
Confidence 358899999999988 44455566554432 467888999999744 3356788888
Q ss_pred hCCCCCCCCcEEEECCCcccc
Q 025290 63 SLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 63 ~l~~~~p~~~v~~i~GNHE~~ 83 (255)
.+.-. ....||||..
T Consensus 101 ~m~yD------a~tiGNHEFd 115 (517)
T COG0737 101 ALGYD------AMTLGNHEFD 115 (517)
T ss_pred hcCCc------EEeecccccc
Confidence 87753 4678999964
No 116
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=93.60 E-value=0.18 Score=49.18 Aligned_cols=52 Identities=15% Similarity=0.258 Sum_probs=40.3
Q ss_pred CCeEEEEccCC----------C--CHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHH
Q 025290 4 PRRVCCIGDVH----------G--YISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFL 61 (255)
Q Consensus 4 ~~ri~vigDIH----------G--~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l 61 (255)
.+||+|.+|+| | .+..|+++|+.+.... .|.|++-||++.-..-|+.+|..+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~------VDmiLlGGDLFHeNkPSr~~L~~~ 76 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQEND------VDMILLGGDLFHENKPSRKTLHRC 76 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcC------CcEEEecCcccccCCccHHHHHHH
Confidence 47999999999 2 3678899999887654 499999999998766666544333
No 117
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=93.54 E-value=0.1 Score=44.51 Aligned_cols=73 Identities=18% Similarity=0.308 Sum_probs=38.2
Q ss_pred EEEEccCCCC-----HHHHHHHHHHhh-hccCCCCCCCcEEEEeCCcCCCCCCh-------------HHHHHHHHh-CCC
Q 025290 7 VCCIGDVHGY-----ISKLQNLWKNLE-THIGPSDFNSAIIIFLGDYCDRGPNT-------------REVIDFLIS-LPT 66 (255)
Q Consensus 7 i~vigDIHG~-----~~~l~~lL~~~~-~~~~~~~~~~d~li~lGDlvDrG~~s-------------~~vl~~l~~-l~~ 66 (255)
|+++||+|-. ++.|.++|+.+. .. ..+.+|++|+++|.-... ...+..+.+ +..
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~------~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDAS------KPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLES 74 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCT------TECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCC
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccC------CCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhh
Confidence 6789999844 455556665554 22 248999999999952211 111111111 122
Q ss_pred CCCCCcEEEECCCcccchh
Q 025290 67 KYPNQKHVFLSGNHDLGFA 85 (255)
Q Consensus 67 ~~p~~~v~~i~GNHE~~~~ 85 (255)
..+..++++|+|+||-...
T Consensus 75 i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 75 ILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp CHCCSEEEEE--TTCTT-S
T ss_pred cccccEEEEeCCCcccccc
Confidence 2234589999999997655
No 118
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=93.47 E-value=0.24 Score=46.23 Aligned_cols=75 Identities=24% Similarity=0.429 Sum_probs=47.3
Q ss_pred CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCC-C-C---------CChHHHHHHHHhCC--CCCCCC
Q 025290 5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCD-R-G---------PNTREVIDFLISLP--TKYPNQ 71 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvD-r-G---------~~s~~vl~~l~~l~--~~~p~~ 71 (255)
|||.|-|--||.++.+=+-+..+.... +.+-|.++++||+=. | + |.-...=+|..-.. ..+| .
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~---~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~AP-V 76 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRG---NTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAP-V 76 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcC---CCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCc-e
Confidence 799999999999888865555554331 124699999999932 1 1 11123333333332 2355 2
Q ss_pred cEEEECCCcccc
Q 025290 72 KHVFLSGNHDLG 83 (255)
Q Consensus 72 ~v~~i~GNHE~~ 83 (255)
-.++|-||||.+
T Consensus 77 lTIFIGGNHEAs 88 (456)
T KOG2863|consen 77 LTIFIGGNHEAS 88 (456)
T ss_pred eEEEecCchHHH
Confidence 457899999975
No 119
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=93.31 E-value=0.24 Score=50.98 Aligned_cols=68 Identities=16% Similarity=0.231 Sum_probs=46.2
Q ss_pred CCeEEEEccCCCCHH----------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-------------
Q 025290 4 PRRVCCIGDVHGYIS----------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT------------- 54 (255)
Q Consensus 4 ~~ri~vigDIHG~~~----------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s------------- 54 (255)
..+|+.++|+||++. .+..++++++... ++..++-.||++-..|.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~-----~ntlllD~GD~iqGspl~~~~~~~~~~~~~~ 113 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEA-----KNSVLFDDGDALQGTPLGDYVANKINDPKKP 113 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhC-----CCeEEEECCCCCCCchHHHHHhhcccccccc
Confidence 358999999999852 2444666665432 246888899999654432
Q ss_pred ------HHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290 55 ------REVIDFLISLPTKYPNQKHVFLSGNHDL 82 (255)
Q Consensus 55 ------~~vl~~l~~l~~~~p~~~v~~i~GNHE~ 82 (255)
..+++++..+... ....||||+
T Consensus 114 ~~~~~~~p~i~~mN~lgyD------a~tlGNHEF 141 (780)
T PRK09418 114 VDPSYTHPLYRLMNLMKYD------VISLGNHEF 141 (780)
T ss_pred cccccchHHHHHHhccCCC------EEecccccc
Confidence 2466777777653 468999995
No 120
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=93.04 E-value=0.2 Score=49.36 Aligned_cols=73 Identities=15% Similarity=0.202 Sum_probs=44.9
Q ss_pred CCeEEEEccCCCCHH----------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-----HHHHHHHHhCCCCC
Q 025290 4 PRRVCCIGDVHGYIS----------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-----REVIDFLISLPTKY 68 (255)
Q Consensus 4 ~~ri~vigDIHG~~~----------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-----~~vl~~l~~l~~~~ 68 (255)
...|+.++|+||.+. .+..+++..+....+ ..++..++..||++...+.+ ..+++.+..+...
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~-~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~D- 111 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAA-EGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYD- 111 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhc-cCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCC-
Confidence 357899999999753 334455555432000 01246778899998754422 3467777777642
Q ss_pred CCCcEEEECCCcccc
Q 025290 69 PNQKHVFLSGNHDLG 83 (255)
Q Consensus 69 p~~~v~~i~GNHE~~ 83 (255)
+ ...||||+-
T Consensus 112 ----a-~tlGNHEFD 121 (551)
T PRK09558 112 ----A-MAVGNHEFD 121 (551)
T ss_pred ----E-EcccccccC
Confidence 3 456999954
No 121
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=92.80 E-value=0.44 Score=42.64 Aligned_cols=75 Identities=19% Similarity=0.266 Sum_probs=43.1
Q ss_pred EEEEccCC-CC----HHHHHHHHHHhhhccCCCC-----CCCcEEEEeCCcCCCCCCh------------------HHHH
Q 025290 7 VCCIGDVH-GY----ISKLQNLWKNLETHIGPSD-----FNSAIIIFLGDYCDRGPNT------------------REVI 58 (255)
Q Consensus 7 i~vigDIH-G~----~~~l~~lL~~~~~~~~~~~-----~~~d~li~lGDlvDrG~~s------------------~~vl 58 (255)
|++|||+| |. ..+++.+.+.+........ ..-.++|+.||.|+.-... .+-+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 78999999 32 3445555565543321100 0124899999999854211 1112
Q ss_pred ----HHHHhCCCCCCCCcEEEECCCcccch
Q 025290 59 ----DFLISLPTKYPNQKHVFLSGNHDLGF 84 (255)
Q Consensus 59 ----~~l~~l~~~~p~~~v~~i~GNHE~~~ 84 (255)
.++.++... ..|.+++||||-.-
T Consensus 82 ~~ld~~l~~l~~~---i~V~imPG~~Dp~~ 108 (257)
T cd07387 82 KELDNFLSQLASS---VPVDLMPGEFDPAN 108 (257)
T ss_pred HHHHHHHHhhhcC---CeEEECCCCCCccc
Confidence 334444433 35889999999643
No 122
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=92.65 E-value=0.4 Score=46.29 Aligned_cols=79 Identities=22% Similarity=0.191 Sum_probs=44.4
Q ss_pred CeEEEEccCCC-C----HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-CC-----------hHHHHHHHHhCCCC
Q 025290 5 RRVCCIGDVHG-Y----ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-PN-----------TREVIDFLISLPTK 67 (255)
Q Consensus 5 ~ri~vigDIHG-~----~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-~~-----------s~~vl~~l~~l~~~ 67 (255)
.++++|||||= . -+++..+++.++.... ....-.-+++.||+||.. -+ ..+-++.+.++-.+
T Consensus 226 v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~-~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~ 304 (481)
T COG1311 226 VYVALISDIHRGSKEFLEDEFEKFIDWLNGPGD-LASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQ 304 (481)
T ss_pred eEEEEEeeeecccHHHHHHHHHHHHHHhcCCcc-cccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhh
Confidence 36899999994 3 3445556666543221 011225788899999942 11 12223333332222
Q ss_pred CC-CCcEEEECCCcccch
Q 025290 68 YP-NQKHVFLSGNHDLGF 84 (255)
Q Consensus 68 ~p-~~~v~~i~GNHE~~~ 84 (255)
-| ...+++.+||||..-
T Consensus 305 vp~~I~v~i~PGnhDa~r 322 (481)
T COG1311 305 VPEHIKVFIMPGNHDAVR 322 (481)
T ss_pred CCCCceEEEecCCCCccc
Confidence 22 346888999999753
No 123
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.06 E-value=0.96 Score=43.51 Aligned_cols=71 Identities=20% Similarity=0.357 Sum_probs=51.4
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCc
Q 025290 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNH 80 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNH 80 (255)
..||+|+||+-|+++.+-+-++.+..... +-|.+|++|++++......+++++....+. .| ..+|++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~G----pFd~liCvGnfF~~~~~~~e~~~ykng~~~-vP-iptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSG----PFDLLICVGNFFGHDTQNAEVEKYKNGTKK-VP-IPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCC----CceEEEEecccCCCccchhHHHHHhcCCcc-Cc-eeEEEecCCC
Confidence 45999999999999888776666655433 469999999999875567788888776543 33 2456555554
No 124
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=90.29 E-value=0.23 Score=44.46 Aligned_cols=75 Identities=19% Similarity=0.272 Sum_probs=48.0
Q ss_pred chhhhhcCCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCC
Q 025290 156 APTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRV 235 (255)
Q Consensus 156 ~~tl~sy~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~ 235 (255)
+++++.||.. .+..-.-+.+.-+|+...++. +++..|||+.|.....++...+ .|.-..
T Consensus 141 declRkyg~a--------nvw~~Ftdlfdy~P~tali~~------------~ifc~HGgLspsi~tld~~r~~-dr~~ev 199 (319)
T KOG0371|consen 141 DECLRKYGNA--------NVWKYFTDLFDYLPLTALIES------------KIFCLHGGLSPSIDTLDLIRLL-DRIQEV 199 (319)
T ss_pred HHHHhhcccc--------cchHHhhhhhhccchHhhhcc------------ceeeccCCcCcccchHHHHHHH-HHhhcc
Confidence 5666666532 233445566677788776662 8999999999998877777754 222222
Q ss_pred CchhhccCCccccCCCcc
Q 025290 236 PKVEALSGRKNVWDIPEV 253 (255)
Q Consensus 236 ~~~~~~~~~~~~w~~~~~ 253 (255)
|- .+-.-+.+|++|+.
T Consensus 200 ph--egpmcDlLwsdpdd 215 (319)
T KOG0371|consen 200 PH--EGPMCDLLWSDPDD 215 (319)
T ss_pred cC--CCChhheeccCccc
Confidence 22 22233889999974
No 125
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=90.04 E-value=0.64 Score=44.11 Aligned_cols=71 Identities=11% Similarity=0.115 Sum_probs=42.0
Q ss_pred CeEEEEccCCCCHHHHH---HHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH------HHHHHHHhCCC--CCCCCcE
Q 025290 5 RRVCCIGDVHGYISKLQ---NLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR------EVIDFLISLPT--KYPNQKH 73 (255)
Q Consensus 5 ~ri~vigDIHG~~~~l~---~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~------~vl~~l~~l~~--~~p~~~v 73 (255)
.|++++||-=.....-. +.+..+.... +.+.++.+||.++.|..+. +..+.+..-.. . ....
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~-----~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L--~~Pw 99 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNE-----RVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDM--QIPF 99 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhC-----CCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhh--CCCe
Confidence 48899999653322222 2333332222 3589999999998887653 33344432211 1 1258
Q ss_pred EEECCCccc
Q 025290 74 VFLSGNHDL 82 (255)
Q Consensus 74 ~~i~GNHE~ 82 (255)
+.|+||||.
T Consensus 100 y~vLGNHDy 108 (394)
T PTZ00422 100 FTVLGQADW 108 (394)
T ss_pred EEeCCcccc
Confidence 999999996
No 126
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=89.87 E-value=0.31 Score=43.95 Aligned_cols=68 Identities=31% Similarity=0.579 Sum_probs=45.2
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG 83 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~ 83 (255)
..|.++|||.|+...... +.+ ..|.++.+||+..-|. +.+|..+=..+... |-..-+.|.||||..
T Consensus 61 ~~r~VcisdtH~~~~~i~--------~~p----~gDvlihagdfT~~g~-~~ev~~fn~~~gsl-ph~yKIVIaGNHELt 126 (305)
T KOG3947|consen 61 YARFVCISDTHELTFDIN--------DIP----DGDVLIHAGDFTNLGL-PEEVIKFNEWLGSL-PHEYKIVIAGNHELT 126 (305)
T ss_pred ceEEEEecCcccccCccc--------cCC----CCceEEeccCCccccC-HHHHHhhhHHhccC-cceeeEEEeecccee
Confidence 358999999999855432 111 3588999999987664 56666655544321 212347899999976
Q ss_pred hh
Q 025290 84 FA 85 (255)
Q Consensus 84 ~~ 85 (255)
+-
T Consensus 127 Fd 128 (305)
T KOG3947|consen 127 FD 128 (305)
T ss_pred ec
Confidence 54
No 127
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=89.84 E-value=0.5 Score=45.40 Aligned_cols=73 Identities=19% Similarity=0.323 Sum_probs=41.6
Q ss_pred CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh----HHHHHHHHhCCCCCCCCcEEEECCC
Q 025290 4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT----REVIDFLISLPTKYPNQKHVFLSGN 79 (255)
Q Consensus 4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s----~~vl~~l~~l~~~~p~~~v~~i~GN 79 (255)
+.+++++||+=-.. .-...+....... ..|.++++||+...-..+ -+-.+++..+...-| -.++.||
T Consensus 147 ~~~~~i~GDlG~~~-~~~s~~~~~~~~~-----k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vP---ymv~~GN 217 (452)
T KOG1378|consen 147 PTRAAIFGDMGCTE-PYTSTLRNQEENL-----KPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVP---YMVCSGN 217 (452)
T ss_pred ceeEEEEccccccc-cccchHhHHhccc-----CCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCc---eEEeccc
Confidence 46899999984322 2222222222211 148999999997332222 234444444444444 6788999
Q ss_pred cccchh
Q 025290 80 HDLGFA 85 (255)
Q Consensus 80 HE~~~~ 85 (255)
||.-..
T Consensus 218 HE~d~~ 223 (452)
T KOG1378|consen 218 HEIDWP 223 (452)
T ss_pred ccccCC
Confidence 997655
No 128
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=88.56 E-value=2.1 Score=38.09 Aligned_cols=70 Identities=23% Similarity=0.321 Sum_probs=51.6
Q ss_pred CeEEEEccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-hHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290 5 RRVCCIGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-TREVIDFLISLPTKYPNQKHVFLSGNHD 81 (255)
Q Consensus 5 ~ri~vigDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s~~vl~~l~~l~~~~p~~~v~~i~GNHE 81 (255)
||+++||||-|. ...+...|..+..+. .-|.+|..|.-.-.|-. ..++.+.+.+.... ++-+|||-
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~ky-----k~dfvI~N~ENaa~G~Git~k~y~~l~~~G~d------viT~GNH~ 69 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKY-----KIDFVIVNGENAAGGFGITEKIYKELLEAGAD------VITLGNHT 69 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhh-----cCcEEEEcCccccCCcCCCHHHHHHHHHhCCC------EEeccccc
Confidence 799999999998 456666676665443 24889999998876664 67888888887652 45799996
Q ss_pred cchh
Q 025290 82 LGFA 85 (255)
Q Consensus 82 ~~~~ 85 (255)
+..-
T Consensus 70 wd~~ 73 (266)
T COG1692 70 WDQK 73 (266)
T ss_pred ccch
Confidence 5433
No 129
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=87.70 E-value=0.95 Score=40.96 Aligned_cols=70 Identities=20% Similarity=0.321 Sum_probs=43.4
Q ss_pred CCeEEEEcc--CCCCHHHHHHHHHH--hhhccCCCCCCCcEEEEeCCcC-CCCCChH------HHHHHHH---hCCCCCC
Q 025290 4 PRRVCCIGD--VHGYISKLQNLWKN--LETHIGPSDFNSAIIIFLGDYC-DRGPNTR------EVIDFLI---SLPTKYP 69 (255)
Q Consensus 4 ~~ri~vigD--IHG~~~~l~~lL~~--~~~~~~~~~~~~d~li~lGDlv-DrG~~s~------~vl~~l~---~l~~~~p 69 (255)
..+++|||| -+|-+..-+.++.. ++... .-|.++.+||-+ |.|+.+. +-.+-+. .|++
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l-----~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQk--- 114 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKL-----DIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQK--- 114 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhc-----cceEEEecCCcccccCCCCCCChhHHhhhhhcccCccccc---
Confidence 358999999 67877665555433 33222 358999999986 5665442 2222222 2222
Q ss_pred CCcEEEECCCcccc
Q 025290 70 NQKHVFLSGNHDLG 83 (255)
Q Consensus 70 ~~~v~~i~GNHE~~ 83 (255)
.-+.|.||||..
T Consensus 115 --pWy~vlGNHDyr 126 (336)
T KOG2679|consen 115 --PWYSVLGNHDYR 126 (336)
T ss_pred --chhhhccCcccc
Confidence 368899999964
No 130
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.47 E-value=1.3 Score=36.53 Aligned_cols=60 Identities=25% Similarity=0.445 Sum_probs=43.5
Q ss_pred CeEEEEccCCC--CH----HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECC
Q 025290 5 RRVCCIGDVHG--YI----SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSG 78 (255)
Q Consensus 5 ~ri~vigDIHG--~~----~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~G 78 (255)
|-+.++||+|= .. ..|+++| + + + .-.+++++|.+. +.+++++++.+.. .+++|||
T Consensus 1 mLvL~lgD~HiP~Ra~~Lp~KFkklL--v---P--g--ki~hilctGNlc-----s~e~~dylk~l~~-----dvhiVrG 61 (183)
T KOG3325|consen 1 MLVLVLGDLHIPHRANDLPAKFKKLL--V---P--G--KIQHILCTGNLC-----SKESYDYLKTLSS-----DVHIVRG 61 (183)
T ss_pred CEEEEeccccCCccccccCHHHHhcc--C---C--C--ceeEEEEeCCcc-----hHHHHHHHHhhCC-----CcEEEec
Confidence 45789999992 22 3344444 1 1 1 247899999976 7789999999874 6999999
Q ss_pred Ccccc
Q 025290 79 NHDLG 83 (255)
Q Consensus 79 NHE~~ 83 (255)
--|..
T Consensus 62 eFD~~ 66 (183)
T KOG3325|consen 62 EFDEN 66 (183)
T ss_pred ccCcc
Confidence 98865
No 131
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=87.42 E-value=2.3 Score=38.67 Aligned_cols=80 Identities=16% Similarity=0.161 Sum_probs=47.7
Q ss_pred CCeEEEEccCCC----CHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC----CCh----HHHHHHHHhC-CCCCC-
Q 025290 4 PRRVCCIGDVHG----YISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG----PNT----REVIDFLISL-PTKYP- 69 (255)
Q Consensus 4 ~~ri~vigDIHG----~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG----~~s----~~vl~~l~~l-~~~~p- 69 (255)
..+++++||+|= -+++|.++++......+... ....+|++|+++... ..+ .+-.+.+..+ ..++|
T Consensus 27 ~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~-~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~ 105 (291)
T PTZ00235 27 RHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENE-LPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKL 105 (291)
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccC-CCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChH
Confidence 468999999993 36777777776632211111 136899999998753 112 2223333221 11222
Q ss_pred ---CCcEEEECCCcccch
Q 025290 70 ---NQKHVFLSGNHDLGF 84 (255)
Q Consensus 70 ---~~~v~~i~GNHE~~~ 84 (255)
...+++|+|-.|-+.
T Consensus 106 L~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 106 ILEHCYLIFIPGINDPCA 123 (291)
T ss_pred HHhcCeEEEECCCCCCCc
Confidence 357999999999753
No 132
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=81.24 E-value=3 Score=41.32 Aligned_cols=73 Identities=19% Similarity=0.260 Sum_probs=48.0
Q ss_pred HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCC--CCCChH-H---HHHHHHhC-CCCCCCCcEEEECCCcccchhhhhcC
Q 025290 18 SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCD--RGPNTR-E---VIDFLISL-PTKYPNQKHVFLSGNHDLGFAAFVGV 90 (255)
Q Consensus 18 ~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvD--rG~~s~-~---vl~~l~~l-~~~~p~~~v~~i~GNHE~~~~~~~~~ 90 (255)
..++.+|+.++.... .-|-++.+||++. +++.+. + ++..+-++ .+-+|+..|+...||||..-.+....
T Consensus 195 ~lies~L~~ike~~~----~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~ 270 (577)
T KOG3770|consen 195 RLIESALDHIKENHK----DIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAP 270 (577)
T ss_pred HHHHHHHHHHHhcCC----CCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCC
Confidence 456778888876543 2589999999984 555443 2 33333222 23367888999999999887776554
Q ss_pred CCCC
Q 025290 91 LPEP 94 (255)
Q Consensus 91 ~~~~ 94 (255)
...+
T Consensus 271 ~~~~ 274 (577)
T KOG3770|consen 271 GSVP 274 (577)
T ss_pred CCCc
Confidence 3333
No 133
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=71.80 E-value=13 Score=33.22 Aligned_cols=64 Identities=22% Similarity=0.283 Sum_probs=42.2
Q ss_pred EEEccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-hHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290 8 CCIGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-TREVIDFLISLPTKYPNQKHVFLSGNHDL 82 (255)
Q Consensus 8 ~vigDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s~~vl~~l~~l~~~~p~~~v~~i~GNHE~ 82 (255)
++||||=|. ...+++.|..+..+. .-|.+|..|.-...|-. +.++.+.|.++..- ++-.|||=+
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~-----~~DfVIaNgENaa~G~Git~~~~~~L~~~GvD------viT~GNH~w 67 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEY-----GIDFVIANGENAAGGFGITPKIAEELFKAGVD------VITMGNHIW 67 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG-------G-SEEEEE-TTTTTTSS--HHHHHHHHHHT-S------EEE--TTTT
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhc-----CCCEEEECCcccCCCCCCCHHHHHHHHhcCCC------EEecCcccc
Confidence 479999998 467778887776543 35999999999987765 67788888887652 356999953
No 134
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=60.91 E-value=24 Score=25.56 Aligned_cols=67 Identities=19% Similarity=0.297 Sum_probs=41.6
Q ss_pred EEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCC
Q 025290 7 VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGN 79 (255)
Q Consensus 7 i~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GN 79 (255)
+.+|=|---+.+++.++++.+....+ ....++++|++-|.|..+.+....+.++..++.+ .+++.|.
T Consensus 14 ~~vi~D~ahNp~s~~a~l~~l~~~~~----~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d--~vi~~~~ 80 (91)
T PF02875_consen 14 PTVIDDYAHNPDSIRALLEALKELYP----KGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLAD--VVILTGD 80 (91)
T ss_dssp EEEEEET--SHHHHHHHHHHHHHHCT----TSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSS--EEEEETS
T ss_pred cEEEEECCCCHHHHHHHHHHHHHhcc----CCcEEEEEccccccccccHHHHHHHHHHHHhcCC--EEEEcCC
Confidence 56778866678899999988865533 2478899999999777776644444444333322 3444443
No 135
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=51.20 E-value=13 Score=37.39 Aligned_cols=22 Identities=18% Similarity=0.342 Sum_probs=19.1
Q ss_pred eEEEEccCCCCHHHHHHHHHHh
Q 025290 6 RVCCIGDVHGYISKLQNLWKNL 27 (255)
Q Consensus 6 ri~vigDIHG~~~~l~~lL~~~ 27 (255)
.-.++|||||.+++|..+|+..
T Consensus 34 TEhF~SDlHGEyeAF~HiLrn~ 55 (640)
T PF06874_consen 34 TEHFMSDLHGEYEAFDHILRNG 55 (640)
T ss_pred ceEeeeccccchHHHHHHHHcC
Confidence 4578999999999999998764
No 136
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=49.71 E-value=6.7 Score=35.93 Aligned_cols=73 Identities=23% Similarity=0.348 Sum_probs=44.2
Q ss_pred CCCCCcccccccccccchhhcccc---cCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCCCcChHH
Q 025290 94 PGGGLGFKEGWKQYEQNEEREGWF---KGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSAD 170 (255)
Q Consensus 94 ~~~~~~~~~~w~~~~~~~~~~~w~---~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~~~~~~~ 170 (255)
|.++..++.+| ++|.+...|. |+.|| .||.+...+|...++..+.
T Consensus 183 ~~~~~~~dllW---sDP~~~~~~~~~~Rg~g~--------~fg~~~~~~Fl~~n~l~~i--------------------- 230 (303)
T PTZ00239 183 PHEGPFCDLMW---SDPEEVEYWAVNSRGAGY--------LFGAKVTKEFCRLNDLTLI--------------------- 230 (303)
T ss_pred CCCCCceeeEe---cCccccCCCccCCCCCcc--------ccCHHHHHHHHHHCCCcEE---------------------
Confidence 44566778899 4454444553 55554 5888888888877765432
Q ss_pred HHhcCCHHHHHHHhcCcceEEec-CeeeecCCCc
Q 025290 171 LVKAVPDHHKKFLADMLWVHEED-EVCVETNDGI 203 (255)
Q Consensus 171 ~~~~~~~~~~~~l~~LP~~~~~~-~~~~~~~~~~ 203 (255)
.+.|..--++........ .+||+|+++|
T Consensus 231 -----iR~He~~~~G~~~~~~~~~~iTvfSa~~Y 259 (303)
T PTZ00239 231 -----CRAHQLVMEGYKYWFPDQNLVTVWSAPNY 259 (303)
T ss_pred -----EEcChhhccceEEEeCCCeEEEEECCCcc
Confidence 223333334444433333 6799999988
No 137
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=39.25 E-value=14 Score=35.94 Aligned_cols=19 Identities=26% Similarity=0.517 Sum_probs=15.0
Q ss_pred EEEccCCCCHHHHHHHHHH
Q 025290 8 CCIGDVHGYISKLQNLWKN 26 (255)
Q Consensus 8 ~vigDIHG~~~~l~~lL~~ 26 (255)
-++||+||.+++|..+|+.
T Consensus 41 HF~SDvHGEYeaF~hVLrN 59 (648)
T COG3855 41 HFMSDVHGEYEAFNHVLRN 59 (648)
T ss_pred hhhhhhhchHHHHHHHHHc
Confidence 3578888888888888765
No 138
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=33.55 E-value=50 Score=29.51 Aligned_cols=47 Identities=34% Similarity=0.535 Sum_probs=25.6
Q ss_pred cEEEEeCCcC-CCCC---ChHHHHHHHHhCCC------CCCCCcEEEECCCcccchh
Q 025290 39 AIIIFLGDYC-DRGP---NTREVIDFLISLPT------KYPNQKHVFLSGNHDLGFA 85 (255)
Q Consensus 39 d~li~lGDlv-DrG~---~s~~vl~~l~~l~~------~~p~~~v~~i~GNHE~~~~ 85 (255)
...+||||-. ||=. ...-++.++.++.. ..-+.+|+++.||||..+-
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~n 142 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFN 142 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceeccC
Confidence 3567777765 2211 11234444444321 1113489999999997654
No 139
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=28.61 E-value=18 Score=32.78 Aligned_cols=73 Identities=23% Similarity=0.483 Sum_probs=42.7
Q ss_pred CCCCCcccccccccccchhhcccc---cCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCCCcChHH
Q 025290 94 PGGGLGFKEGWKQYEQNEEREGWF---KGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSAD 170 (255)
Q Consensus 94 ~~~~~~~~~~w~~~~~~~~~~~w~---~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~~~~~~~ 170 (255)
|.++...+.+|.. |.+...|. |+.|| .||.+...+|...++..+.
T Consensus 182 ~~~~~~~dllWsD---P~~~~~~~~~~Rg~g~--------~fg~~~~~~Fl~~n~l~~i--------------------- 229 (285)
T cd07415 182 PHEGPMCDLLWSD---PDDIEGWGISPRGAGY--------LFGQDVVEEFNHNNGLTLI--------------------- 229 (285)
T ss_pred CCCCCccceEecC---CCccCCCCcCCCCCcc--------ccCHHHHHHHHHHCCCeEE---------------------
Confidence 3445667788944 44334443 54454 5777777777777765432
Q ss_pred HHhcCCHHHHHHHhcCcceEEecCeeeecCCCc
Q 025290 171 LVKAVPDHHKKFLADMLWVHEEDEVCVETNDGI 203 (255)
Q Consensus 171 ~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~ 203 (255)
.+.|....+++........+||+|+++|
T Consensus 230 -----iR~He~~~~G~~~~~~~~~~TvfSa~~y 257 (285)
T cd07415 230 -----CRAHQLVMEGYQWMFDDKLVTVWSAPNY 257 (285)
T ss_pred -----EEcCccccceEEEecCCcEEEEecCCcc
Confidence 1233333344444445556799999988
No 140
>KOG4513 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=26.31 E-value=1.8e+02 Score=27.94 Aligned_cols=53 Identities=30% Similarity=0.358 Sum_probs=39.4
Q ss_pred EEEcc--CCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-----HHHHHHHHhC
Q 025290 8 CCIGD--VHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-----REVIDFLISL 64 (255)
Q Consensus 8 ~vigD--IHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-----~~vl~~l~~l 64 (255)
-.+|| +|+.++.++.||+.+..... +.-.+-+++|==|--|.| .+++++|++-
T Consensus 129 GlvSDGGVHShidhl~allka~~erg~----~ei~vH~~tDGRDt~p~s~vgfLe~~l~fLr~~ 188 (531)
T KOG4513|consen 129 GLVSDGGVHSHIDHLQALLKALAERGA----KEIRVHILTDGRDTLPGSSVGFLEADLDFLRKV 188 (531)
T ss_pred EEecCCchhhhHHHHHHHHHHHHhcCC----ceEEEEEecCCccCCCCcchhhHHHHHHHHHHc
Confidence 45666 99999999999998876543 345777899987776654 4677777754
No 141
>COG3207 DIT1 Pyoverdine/dityrosine biosynthesis protein [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.21 E-value=86 Score=28.50 Aligned_cols=40 Identities=15% Similarity=0.138 Sum_probs=27.3
Q ss_pred CCCCeEEEEccCC-------------CC-HHHHHHHHHHhhhccCCCCCCCcEEEEeCCc
Q 025290 2 SRPRRVCCIGDVH-------------GY-ISKLQNLWKNLETHIGPSDFNSAIIIFLGDY 47 (255)
Q Consensus 2 ~~~~ri~vigDIH-------------G~-~~~l~~lL~~~~~~~~~~~~~~d~li~lGDl 47 (255)
.+.++|+|+||=| .. -++|..+.+.++... .+.++++||+
T Consensus 103 ~PG~ki~I~SDghvFsD~I~Vdddh~s~Y~d~Lr~m~~~i~~~~------i~kI~n~e~~ 156 (330)
T COG3207 103 APGAKITICSDGHVFSDLIRVDDDHISAYQDALRLMIEEIGATH------IGKIFNLEDV 156 (330)
T ss_pred CCCCEEEEEeCCceehhhccccchhHHHHHHHHHHHHHHcCCCC------ccceeecchh
Confidence 3568999999988 22 245566667665543 3778889886
No 142
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=24.13 E-value=22 Score=32.71 Aligned_cols=73 Identities=21% Similarity=0.298 Sum_probs=41.8
Q ss_pred CCCCCcccccccccccchhhccc---ccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCCCcChHH
Q 025290 94 PGGGLGFKEGWKQYEQNEEREGW---FKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSAD 170 (255)
Q Consensus 94 ~~~~~~~~~~w~~~~~~~~~~~w---~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~~~~~~~ 170 (255)
|.++..++.+|. +|.+...| -|+.|| .||.+...+|...++..+.
T Consensus 201 ~~~~~~~dllWs---DP~~~~~~~~s~Rg~g~--------~fg~~~~~~Fl~~n~l~~i--------------------- 248 (316)
T cd07417 201 PDSGLMCELLWS---DPQPQPGRSPSKRGVGC--------QFGPDVTKRFLEENNLEYI--------------------- 248 (316)
T ss_pred Cccccceeeeec---CCCCCCCCCccCCCCce--------EeCHHHHHHHHHHcCCcEE---------------------
Confidence 345667788894 44433333 254444 5777777777777765432
Q ss_pred HHhcCCHHHHHHHhcCcceEEecCeeeecCCCc
Q 025290 171 LVKAVPDHHKKFLADMLWVHEEDEVCVETNDGI 203 (255)
Q Consensus 171 ~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~ 203 (255)
.+.|.---+++........+||+|++||
T Consensus 249 -----iR~He~~~~G~~~~~~~~~~TvfSa~~Y 276 (316)
T cd07417 249 -----IRSHEVKDEGYEVEHDGKCITVFSAPNY 276 (316)
T ss_pred -----EECCcccceeEEEecCCeEEEEeCCccc
Confidence 1122222233333444456799999988
No 143
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=23.14 E-value=1.2e+02 Score=24.75 Aligned_cols=51 Identities=18% Similarity=0.217 Sum_probs=31.5
Q ss_pred CCeEEEEccCCCC-HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhC
Q 025290 4 PRRVCCIGDVHGY-ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISL 64 (255)
Q Consensus 4 ~~ri~vigDIHG~-~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l 64 (255)
..+|.+|||.|++ ...+..++..++. .+.+++----.-+...++++.+.+.
T Consensus 2 gl~i~~vGD~~~rv~~Sl~~~~~~~g~----------~~~~~~P~~~~~~~~~~~~~~~~~~ 53 (158)
T PF00185_consen 2 GLKIAYVGDGHNRVAHSLIELLAKFGM----------EVVLIAPEGLRYPPDPEVLEKAKKN 53 (158)
T ss_dssp TEEEEEESSTTSHHHHHHHHHHHHTTS----------EEEEESSGGGGGSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCChHHHHHHHHHHHcCC----------EEEEECCCcccCCCCHHHHHHHHHH
Confidence 4689999998888 5677777777743 3666654321112233567666554
No 144
>PF04723 GRDA: Glycine reductase complex selenoprotein A; InterPro: IPR006812 Found in clostridia, this protein contains one active site selenocysteine and catalyses the reductive deamination of glycine, which is coupled to the esterification of orthophosphate resulting in the formation of ATP []. A member of this family may also exist in Treponema denticola [].; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=22.79 E-value=3.6e+02 Score=22.03 Aligned_cols=74 Identities=19% Similarity=0.224 Sum_probs=50.1
Q ss_pred CCCeEEEEccCCCC-HHHHHHHHHHhhhccCCCCCCCcEEEEeCCc---CCCCCChHHHHHHHHhCCCCCCCCcEEEECC
Q 025290 3 RPRRVCCIGDVHGY-ISKLQNLWKNLETHIGPSDFNSAIIIFLGDY---CDRGPNTREVIDFLISLPTKYPNQKHVFLSG 78 (255)
Q Consensus 3 ~~~ri~vigDIHG~-~~~l~~lL~~~~~~~~~~~~~~d~li~lGDl---vDrG~~s~~vl~~l~~l~~~~p~~~v~~i~G 78 (255)
..+|+++|||--|= -.++++.++..+. +.++..=.. ...|...++.=..++++..+|...++++|.|
T Consensus 4 ~gkKviiiGdRDGiPgpAie~c~~~~ga---------evvfs~TeCFVctaagaMDLEnQ~rvk~~aEk~g~enlvVvlG 74 (150)
T PF04723_consen 4 EGKKVIIIGDRDGIPGPAIEECVKTAGA---------EVVFSSTECFVCTAAGAMDLENQQRVKDLAEKYGAENLVVVLG 74 (150)
T ss_pred CCcEEEEEecCCCCCcHHHHHHHHhcCc---------eEEEEeeeEEEecccccccHHHHHHHHHHHHhcCCccEEEEec
Confidence 46799999998876 4677777777642 222211111 1456667777778888877776669999999
Q ss_pred Ccccchh
Q 025290 79 NHDLGFA 85 (255)
Q Consensus 79 NHE~~~~ 85 (255)
.-|.-.-
T Consensus 75 ~aeaE~a 81 (150)
T PF04723_consen 75 AAEAEAA 81 (150)
T ss_pred CCChhhh
Confidence 9985443
No 145
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=20.89 E-value=3.3e+02 Score=20.62 Aligned_cols=21 Identities=24% Similarity=0.445 Sum_probs=11.3
Q ss_pred CcEEEEeCCcCCCCCChHHHHHHH
Q 025290 38 SAIIIFLGDYCDRGPNTREVIDFL 61 (255)
Q Consensus 38 ~d~li~lGDlvDrG~~s~~vl~~l 61 (255)
..++|++||- |..-.++..-+
T Consensus 64 ~~kfiLIGDs---gq~DpeiY~~i 84 (100)
T PF09949_consen 64 ERKFILIGDS---GQHDPEIYAEI 84 (100)
T ss_pred CCcEEEEeeC---CCcCHHHHHHH
Confidence 4567777765 33334444443
Done!